##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM474497v1 #!genome-build-accession NCBI_Assembly:GCA_004744975.1 #!annotation-date 03/23/2018 18:32:50 #!annotation-source NCBI ##sequence-region PYKB01000504.1 1 1419 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000504.1 Genbank region 1 1419 . + . ID=PYKB01000504.1:1..1419;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000504.1 Genbank gene 1 233 . + . ID=gene-C9F09_06480;Name=C9F09_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06480;partial=true;start_range=.,1 PYKB01000504.1 Protein Homology CDS 1 233 . + 2 ID=cds-TGC97516.1;Parent=gene-C9F09_06480;Dbxref=NCBI_GP:TGC97516.1;Name=TGC97516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457593.1;locus_tag=C9F09_06480;partial=true;product=inorganic triphosphatase;protein_id=TGC97516.1;start_range=.,1;transl_table=11 PYKB01000504.1 Genbank gene 351 1419 . + . ID=gene-C9F09_06485;Name=C9F09_06485;end_range=1419,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06485;partial=true PYKB01000504.1 Protein Homology CDS 351 1419 . + 0 ID=cds-TGC97517.1;Parent=gene-C9F09_06485;Dbxref=NCBI_GP:TGC97517.1;Name=TGC97517.1;end_range=1419,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457592.1;locus_tag=C9F09_06485;partial=true;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=TGC97517.1;transl_table=11 ##sequence-region PYKB01000842.1 1 1414 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000842.1 Genbank region 1 1414 . + . ID=PYKB01000842.1:1..1414;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000842.1 Genbank pseudogene 54 1160 . - . ID=gene-C9F09_13345;Name=C9F09_13345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13345;pseudo=true PYKB01000842.1 Protein Homology CDS 54 1160 . - 0 ID=cds-C9F09_13345;Parent=gene-C9F09_13345;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=C9F09_13345;product=ATP-dependent protease;pseudo=true;transl_table=11 ##sequence-region PYKB01000185.1 1 1407 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000185.1 Genbank region 1 1407 . + . ID=PYKB01000185.1:1..1407;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000185.1 Genbank gene 1 1167 . + . ID=gene-C9F09_02055;Name=C9F09_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02055;partial=true;start_range=.,1 PYKB01000185.1 Protein Homology CDS 1 1167 . + 0 ID=cds-TGD03824.1;Parent=gene-C9F09_02055;Dbxref=NCBI_GP:TGD03824.1;Name=TGD03824.1;Note=Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457404.1;locus_tag=C9F09_02055;partial=true;product=bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-ACP synthetase;protein_id=TGD03824.1;start_range=.,1;transl_table=11 PYKB01000185.1 Genbank gene 1160 1407 . + . ID=gene-C9F09_02060;Name=C9F09_02060;end_range=1407,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02060;partial=true PYKB01000185.1 Protein Homology CDS 1160 1407 . + 0 ID=cds-TGD03825.1;Parent=gene-C9F09_02060;Dbxref=NCBI_GP:TGD03825.1;Name=TGD03825.1;end_range=1407,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457403.1;locus_tag=C9F09_02060;partial=true;product=MFS transporter;protein_id=TGD03825.1;transl_table=11 ##sequence-region PYKB01001432.1 1 1407 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001432.1 Genbank region 1 1407 . + . ID=PYKB01001432.1:1..1407;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001432.1 Genbank gene 1 976 . + . ID=gene-C9F09_24625;Name=C9F09_24625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24625;partial=true;start_range=.,1 PYKB01001432.1 Protein Homology CDS 1 976 . + 1 ID=cds-TGC78762.1;Parent=gene-C9F09_24625;Dbxref=NCBI_GP:TGC78762.1;Name=TGC78762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461623.1;locus_tag=C9F09_24625;partial=true;product=late control protein D;protein_id=TGC78762.1;start_range=.,1;transl_table=11 PYKB01001432.1 Genbank gene 1045 1263 . + . ID=gene-C9F09_24630;Name=C9F09_24630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24630 PYKB01001432.1 Protein Homology CDS 1045 1263 . + 0 ID=cds-TGC78763.1;Parent=gene-C9F09_24630;Dbxref=NCBI_GP:TGC78763.1;Name=TGC78763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461622.1;locus_tag=C9F09_24630;product=levansucrase regulator;protein_id=TGC78763.1;transl_table=11 ##sequence-region PYKB01001674.1 1 1406 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001674.1 Genbank region 1 1406 . + . ID=PYKB01001674.1:1..1406;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001674.1 Genbank gene 1 236 . + . ID=gene-C9F09_29135;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=C9F09_29135;partial=true;start_range=.,1 PYKB01001674.1 Protein Homology CDS 1 236 . + 2 ID=cds-TGC72991.1;Parent=gene-C9F09_29135;Dbxref=NCBI_GP:TGC72991.1;Name=TGC72991.1;Note=can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotC is a membrane component;gbkey=CDS;gene=potC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455715.1;locus_tag=C9F09_29135;partial=true;product=spermidine/putrescine ABC transporter permease PotC;protein_id=TGC72991.1;start_range=.,1;transl_table=11 PYKB01001674.1 Genbank gene 261 1307 . + . ID=gene-C9F09_29140;Name=C9F09_29140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29140 PYKB01001674.1 Protein Homology CDS 261 1307 . + 0 ID=cds-TGC72992.1;Parent=gene-C9F09_29140;Dbxref=NCBI_GP:TGC72992.1;Name=TGC72992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=C9F09_29140;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=TGC72992.1;transl_table=11 ##sequence-region PYKB01000701.1 1 1404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000701.1 Genbank region 1 1404 . + . ID=PYKB01000701.1:1..1404;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000701.1 Genbank gene 1 467 . - . ID=gene-C9F09_10670;Name=C9F09_10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10670;partial=true;start_range=.,1 PYKB01000701.1 Protein Homology CDS 1 467 . - 0 ID=cds-TGC93698.1;Parent=gene-C9F09_10670;Dbxref=NCBI_GP:TGC93698.1;Name=TGC93698.1;Note=involved in the transport of glycerol into the cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457965.1;locus_tag=C9F09_10670;partial=true;product=aquaporin;protein_id=TGC93698.1;start_range=.,1;transl_table=11 PYKB01000701.1 Genbank gene 866 1105 . + . ID=gene-C9F09_10675;Name=C9F09_10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10675 PYKB01000701.1 Protein Homology CDS 866 1105 . + 0 ID=cds-TGC93699.1;Parent=gene-C9F09_10675;Dbxref=NCBI_GP:TGC93699.1;Name=TGC93699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501806.1;locus_tag=C9F09_10675;product=cell division protein ZapB;protein_id=TGC93699.1;transl_table=11 ##sequence-region PYKB01000758.1 1 1403 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000758.1 Genbank region 1 1403 . + . ID=PYKB01000758.1:1..1403;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000758.1 Genbank pseudogene 75 314 . - . ID=gene-C9F09_11705;Name=C9F09_11705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11705;pseudo=true PYKB01000758.1 Protein Homology CDS 75 314 . - 0 ID=cds-C9F09_11705;Parent=gene-C9F09_11705;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457010.1;locus_tag=C9F09_11705;product=DUF1176 domain-containing protein;pseudo=true;transl_table=11 PYKB01000758.1 Genbank gene 439 1014 . - . ID=gene-C9F09_11710;Name=C9F09_11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11710 PYKB01000758.1 Protein Homology CDS 439 1014 . - 0 ID=cds-TGC92812.1;Parent=gene-C9F09_11710;Dbxref=NCBI_GP:TGC92812.1;Name=TGC92812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457011.1;locus_tag=C9F09_11710;product=GDP-mannose pyrophosphatase NudK;protein_id=TGC92812.1;transl_table=11 PYKB01000758.1 Genbank gene 1218 1403 . + . ID=gene-C9F09_11715;Name=C9F09_11715;end_range=1403,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11715;partial=true PYKB01000758.1 Protein Homology CDS 1218 1403 . + 0 ID=cds-TGC92813.1;Parent=gene-C9F09_11715;Dbxref=NCBI_GP:TGC92813.1;Name=TGC92813.1;end_range=1403,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457012.1;locus_tag=C9F09_11715;partial=true;product=penicillin binding protein PBP4B;protein_id=TGC92813.1;transl_table=11 ##sequence-region PYKB01000352.1 1 1399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000352.1 Genbank region 1 1399 . + . ID=PYKB01000352.1:1..1399;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000352.1 Genbank gene 1 1226 . + . ID=gene-C9F09_03965;Name=C9F09_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03965;partial=true;start_range=.,1 PYKB01000352.1 Protein Homology CDS 1 1226 . + 2 ID=cds-TGD00464.1;Parent=gene-C9F09_03965;Dbxref=NCBI_GP:TGD00464.1;Name=TGD00464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=C9F09_03965;partial=true;product=molecular chaperone HtpG;protein_id=TGD00464.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001522.1 1 1399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001522.1 Genbank region 1 1399 . + . ID=PYKB01001522.1:1..1399;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001522.1 Genbank gene 92 1072 . + . ID=gene-C9F09_26390;Name=C9F09_26390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26390 PYKB01001522.1 Protein Homology CDS 92 1072 . + 0 ID=cds-TGC76739.1;Parent=gene-C9F09_26390;Dbxref=NCBI_GP:TGC76739.1;Name=TGC76739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001569118.1;locus_tag=C9F09_26390;product=capsular polysaccharide biosynthesis protein;protein_id=TGC76739.1;transl_table=11 PYKB01001522.1 Genbank gene 1158 1399 . - . ID=gene-C9F09_26395;Name=C9F09_26395;end_range=1399,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26395;partial=true PYKB01001522.1 Protein Homology CDS 1158 1399 . - 2 ID=cds-TGC76740.1;Parent=gene-C9F09_26395;Dbxref=NCBI_GP:TGC76740.1;Name=TGC76740.1;Note=YegA%3B inner membrane protein involved in the assembly of outer membrane proteins (OMPs)%3B asmA-null mutants show low lipopolysaccharide (LPS) levels%2C suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity%2C resulting on altered assembly of OMPs;end_range=1399,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=C9F09_26395;partial=true;product=outer membrane assembly protein AsmA;protein_id=TGC76740.1;transl_table=11 ##sequence-region PYKB01001281.1 1 1394 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001281.1 Genbank region 1 1394 . + . ID=PYKB01001281.1:1..1394;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001281.1 Genbank pseudogene 91 1394 . - . ID=gene-C9F09_21930;Name=C9F09_21930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21930;pseudo=true PYKB01001281.1 Protein Homology CDS 91 1394 . - 2 ID=cds-C9F09_21930;Parent=gene-C9F09_21930;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001552215.1;locus_tag=C9F09_21930;product=autotransporter adhesin BigA;pseudo=true;transl_table=11 ##sequence-region PYKB01001746.1 1 7917 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001746.1 Genbank region 1 7917 . + . ID=PYKB01001746.1:1..7917;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001746.1 Genbank gene 1 364 . - . ID=gene-C9F09_30580;Name=C9F09_30580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30580;partial=true;start_range=.,1 PYKB01001746.1 Protein Homology CDS 1 364 . - 0 ID=cds-TGC70561.1;Parent=gene-C9F09_30580;Dbxref=NCBI_GP:TGC70561.1;Name=TGC70561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=C9F09_30580;partial=true;product=nitrogen regulatory protein P-II;protein_id=TGC70561.1;start_range=.,1;transl_table=11 PYKB01001746.1 Genbank gene 441 1778 . - . ID=gene-C9F09_30585;Name=C9F09_30585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30585 PYKB01001746.1 Protein Homology CDS 441 1778 . - 0 ID=cds-TGC70562.1;Parent=gene-C9F09_30585;Dbxref=NCBI_GP:TGC70562.1;Name=TGC70562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461497.1;locus_tag=C9F09_30585;product=two-component system response regulator GlrR;protein_id=TGC70562.1;transl_table=11 PYKB01001746.1 Genbank gene 1775 2539 . - . ID=gene-C9F09_30590;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=C9F09_30590 PYKB01001746.1 Protein Homology CDS 1775 2539 . - 0 ID=cds-TGC70563.1;Parent=gene-C9F09_30590;Dbxref=NCBI_GP:TGC70563.1;Name=TGC70563.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457093.1;locus_tag=C9F09_30590;product=two-component system QseEF-associated lipoprotein QseG;protein_id=TGC70563.1;transl_table=11 PYKB01001746.1 Genbank gene 2541 3926 . - . ID=gene-C9F09_30595;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=C9F09_30595 PYKB01001746.1 Protein Homology CDS 2541 3926 . - 0 ID=cds-TGC70564.1;Parent=gene-C9F09_30595;Dbxref=NCBI_GP:TGC70564.1;Name=TGC70564.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457094.1;locus_tag=C9F09_30595;product=two component system sensor histidine kinase QseE/GlrK;protein_id=TGC70564.1;transl_table=11 PYKB01001746.1 Genbank gene 4621 7917 . - . ID=gene-C9F09_30600;Name=C9F09_30600;end_range=7917,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30600;partial=true PYKB01001746.1 Protein Homology CDS 4621 7917 . - 0 ID=cds-TGC70565.1;Parent=gene-C9F09_30600;Dbxref=NCBI_GP:TGC70565.1;Name=TGC70565.1;end_range=7917,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683423.1;locus_tag=C9F09_30600;partial=true;product=phosphoribosylformylglycinamidine synthase;protein_id=TGC70565.1;transl_table=11 ##sequence-region PYKB01001332.1 1 1393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001332.1 Genbank region 1 1393 . + . ID=PYKB01001332.1:1..1393;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001332.1 Genbank gene 1 1089 . + . ID=gene-C9F09_22850;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=C9F09_22850;partial=true;start_range=.,1 PYKB01001332.1 Protein Homology CDS 1 1089 . + 0 ID=cds-TGC80883.1;Parent=gene-C9F09_22850;Dbxref=NCBI_GP:TGC80883.1;Name=TGC80883.1;gbkey=CDS;gene=tamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458846.1;locus_tag=C9F09_22850;partial=true;product=autotransporter assembly complex protein TamA;protein_id=TGC80883.1;start_range=.,1;transl_table=11 PYKB01001332.1 Genbank gene 1086 1393 . + . ID=gene-C9F09_22855;Name=C9F09_22855;end_range=1393,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22855;partial=true PYKB01001332.1 Protein Homology CDS 1086 1393 . + 0 ID=cds-TGC80884.1;Parent=gene-C9F09_22855;Dbxref=NCBI_GP:TGC80884.1;Name=TGC80884.1;end_range=1393,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=C9F09_22855;partial=true;product=hypothetical protein;protein_id=TGC80884.1;transl_table=11 ##sequence-region PYKB01000099.1 1 1391 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000099.1 Genbank region 1 1391 . + . ID=PYKB01000099.1:1..1391;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000099.1 Genbank gene 1 947 . + . ID=gene-C9F09_01140;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;gene_synonym=citA;locus_tag=C9F09_01140;partial=true;start_range=.,1 PYKB01000099.1 Protein Homology CDS 1 947 . + 2 ID=cds-TGD05454.1;Parent=gene-C9F09_01140;Dbxref=NCBI_GP:TGD05454.1;Name=TGD05454.1;Note=regulates the expression of citrate fermentation genes;gbkey=CDS;gene=dpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=C9F09_01140;partial=true;product=histidine kinase;protein_id=TGD05454.1;start_range=.,1;transl_table=11 PYKB01000099.1 Genbank gene 916 1391 . + . ID=gene-C9F09_01145;Name=dpiA;end_range=1391,.;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=C9F09_01145;partial=true PYKB01000099.1 Protein Homology CDS 916 1391 . + 0 ID=cds-TGD05455.1;Parent=gene-C9F09_01145;Dbxref=NCBI_GP:TGD05455.1;Name=TGD05455.1;Note=regulates the expression of citrate fermentation genes;end_range=1391,.;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=C9F09_01145;partial=true;product=response regulator;protein_id=TGD05455.1;transl_table=11 ##sequence-region PYKB01000078.1 1 1390 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000078.1 Genbank region 1 1390 . + . ID=PYKB01000078.1:1..1390;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000078.1 Genbank gene 1 79 . - . ID=gene-C9F09_00925;Name=C9F09_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00925;partial=true;start_range=.,1 PYKB01000078.1 Protein Homology CDS 1 79 . - 0 ID=cds-TGD05906.1;Parent=gene-C9F09_00925;Dbxref=NCBI_GP:TGD05906.1;Name=TGD05906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460994.1;locus_tag=C9F09_00925;partial=true;product=ethanolamine utilization protein EutN;protein_id=TGD05906.1;start_range=.,1;transl_table=11 PYKB01000078.1 Genbank gene 83 574 . - . ID=gene-C9F09_00930;Name=C9F09_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00930 PYKB01000078.1 Protein Homology CDS 83 574 . - 0 ID=cds-TGD05907.1;Parent=gene-C9F09_00930;Dbxref=NCBI_GP:TGD05907.1;Name=TGD05907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=C9F09_00930;product=microcompartment protein PduM;protein_id=TGD05907.1;transl_table=11 PYKB01000078.1 Genbank gene 571 1203 . - . ID=gene-C9F09_00935;Name=C9F09_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00935 PYKB01000078.1 Protein Homology CDS 571 1203 . - 0 ID=cds-TGD05908.1;Parent=gene-C9F09_00935;Dbxref=NCBI_GP:TGD05908.1;Name=TGD05908.1;Note=catalyzes the formation of propionyl phosphate from propionyl-CoA in propanediol degradation;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=C9F09_00935;product=propanediol utilization protein;protein_id=TGD05908.1;transl_table=11 PYKB01000078.1 Genbank gene 1203 1390 . - . ID=gene-C9F09_00940;Name=C9F09_00940;end_range=1390,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00940;partial=true PYKB01000078.1 Protein Homology CDS 1203 1390 . - 2 ID=cds-TGD05909.1;Parent=gene-C9F09_00940;Dbxref=NCBI_GP:TGD05909.1;Name=TGD05909.1;end_range=1390,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456596.1;locus_tag=C9F09_00940;partial=true;product=microcompartment protein;protein_id=TGD05909.1;transl_table=11 ##sequence-region PYKB01001005.1 1 1388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001005.1 Genbank region 1 1388 . + . ID=PYKB01001005.1:1..1388;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001005.1 Genbank gene 78 1388 . - . ID=gene-C9F09_16780;Name=C9F09_16780;end_range=1388,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16780;partial=true PYKB01001005.1 Protein Homology CDS 78 1388 . - 0 ID=cds-TGC88141.1;Parent=gene-C9F09_16780;Dbxref=NCBI_GP:TGC88141.1;Name=TGC88141.1;end_range=1388,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=C9F09_16780;partial=true;product=mechanosensitive channel protein;protein_id=TGC88141.1;transl_table=11 ##sequence-region PYKB01001390.1 1 1379 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001390.1 Genbank region 1 1379 . + . ID=PYKB01001390.1:1..1379;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001390.1 Genbank pseudogene 70 798 . - . ID=gene-C9F09_23930;Name=C9F09_23930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23930;pseudo=true PYKB01001390.1 Protein Homology CDS 70 798 . - 0 ID=cds-C9F09_23930;Parent=gene-C9F09_23930;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458412.1;locus_tag=C9F09_23930;product=DNA utilization protein HofM;pseudo=true;transl_table=11 PYKB01001390.1 Genbank gene 895 1379 . + . ID=gene-C9F09_23935;Name=mrcA;end_range=1379,.;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=C9F09_23935;partial=true PYKB01001390.1 Protein Homology CDS 895 1379 . + 0 ID=cds-TGC79695.1;Parent=gene-C9F09_23935;Dbxref=NCBI_GP:TGC79695.1;Name=TGC79695.1;Note=bifunctional murein transglycosylase/murein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits;end_range=1379,.;gbkey=CDS;gene=mrcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458411.3;locus_tag=C9F09_23935;partial=true;product=carboxypeptidase/penicillin-binding protein 1A;protein_id=TGC79695.1;transl_table=11 ##sequence-region PYKB01000678.1 1 1371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000678.1 Genbank region 1 1371 . + . ID=PYKB01000678.1:1..1371;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000678.1 Genbank gene 1 1071 . - . ID=gene-C9F09_10125;Name=C9F09_10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10125;partial=true;start_range=.,1 PYKB01000678.1 Protein Homology CDS 1 1071 . - 0 ID=cds-TGC93993.1;Parent=gene-C9F09_10125;Dbxref=NCBI_GP:TGC93993.1;Name=TGC93993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455228.1;locus_tag=C9F09_10125;partial=true;product=sigma-54-dependent transcriptional regulator;protein_id=TGC93993.1;start_range=.,1;transl_table=11 PYKB01000678.1 Genbank gene 1139 1371 . - . ID=gene-C9F09_10130;Name=C9F09_10130;end_range=1371,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10130;partial=true PYKB01000678.1 Protein Homology CDS 1139 1371 . - 2 ID=cds-TGC93994.1;Parent=gene-C9F09_10130;Dbxref=NCBI_GP:TGC93994.1;Name=TGC93994.1;end_range=1371,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455227.1;locus_tag=C9F09_10130;partial=true;product=hypothetical protein;protein_id=TGC93994.1;transl_table=11 ##sequence-region PYKB01000913.1 1 1369 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000913.1 Genbank region 1 1369 . + . ID=PYKB01000913.1:1..1369;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000913.1 Genbank gene 1 682 . + . ID=gene-C9F09_15000;Name=C9F09_15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15000;partial=true;start_range=.,1 PYKB01000913.1 Protein Homology CDS 1 682 . + 1 ID=cds-TGC89910.1;Parent=gene-C9F09_15000;Dbxref=NCBI_GP:TGC89910.1;Name=TGC89910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458227.1;locus_tag=C9F09_15000;partial=true;product=glycerol-3-phosphate dehydrogenase;protein_id=TGC89910.1;start_range=.,1;transl_table=11 PYKB01000913.1 Genbank gene 760 1369 . + . ID=gene-C9F09_15005;Name=C9F09_15005;end_range=1369,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15005;partial=true PYKB01000913.1 Protein Homology CDS 760 1369 . + 0 ID=cds-TGC89911.1;Parent=gene-C9F09_15005;Dbxref=NCBI_GP:TGC89911.1;Name=TGC89911.1;end_range=1369,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=C9F09_15005;partial=true;product=serine O-acetyltransferase;protein_id=TGC89911.1;transl_table=11 ##sequence-region PYKB01000690.1 1 1365 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000690.1 Genbank region 1 1365 . + . ID=PYKB01000690.1:1..1365;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000690.1 Genbank pseudogene 18 635 . - . ID=gene-C9F09_10465;Name=C9F09_10465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10465;pseudo=true PYKB01000690.1 Protein Homology CDS 18 635 . - 0 ID=cds-C9F09_10465;Parent=gene-C9F09_10465;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457209.1;locus_tag=C9F09_10465;product=proline/glycine betaine ABC transporter substrate-binding protein ProX;pseudo=true;transl_table=11 PYKB01000690.1 Genbank pseudogene 705 1325 . - . ID=gene-C9F09_10470;Name=C9F09_10470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10470;pseudo=true PYKB01000690.1 Protein Homology CDS 705 1325 . - 0 ID=cds-C9F09_10470;Parent=gene-C9F09_10470;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457208.1;locus_tag=C9F09_10470;product=proline/glycine betaine ABC transporter permease ProW;pseudo=true;transl_table=11 ##sequence-region PYKB01000955.1 1 1361 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000955.1 Genbank region 1 1361 . + . ID=PYKB01000955.1:1..1361;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000955.1 Genbank gene 1 176 . - . ID=gene-C9F09_15805;Name=C9F09_15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15805;partial=true;start_range=.,1 PYKB01000955.1 Protein Homology CDS 1 176 . - 0 ID=cds-TGC89159.1;Parent=gene-C9F09_15805;Dbxref=NCBI_GP:TGC89159.1;Name=TGC89159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455616.1;locus_tag=C9F09_15805;partial=true;product=hypothetical protein;protein_id=TGC89159.1;start_range=.,1;transl_table=11 PYKB01000955.1 Genbank gene 313 480 . - . ID=gene-C9F09_15810;Name=C9F09_15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15810 PYKB01000955.1 Protein Homology CDS 313 480 . - 0 ID=cds-TGC89157.1;Parent=gene-C9F09_15810;Dbxref=NCBI_GP:TGC89157.1;Name=TGC89157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=C9F09_15810;product=stress-induced protein;protein_id=TGC89157.1;transl_table=11 PYKB01000955.1 Genbank gene 865 1361 . + . ID=gene-C9F09_15815;Name=C9F09_15815;end_range=1361,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15815;partial=true PYKB01000955.1 Protein Homology CDS 865 1361 . + 0 ID=cds-TGC89158.1;Parent=gene-C9F09_15815;Dbxref=NCBI_GP:TGC89158.1;Name=TGC89158.1;Note=catalyzes the transfer of electrons from NADH to ubiquinone;end_range=1361,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=C9F09_15815;partial=true;product=NAD(P)H:quinone oxidoreductase;protein_id=TGC89158.1;transl_table=11 ##sequence-region PYKB01001649.1 1 1360 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001649.1 Genbank region 1 1360 . + . ID=PYKB01001649.1:1..1360;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001649.1 Genbank gene 1 1360 . + . ID=gene-C9F09_28790;Name=C9F09_28790;end_range=1360,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28790;partial=true;start_range=.,1 PYKB01001649.1 Protein Homology CDS 1 1360 . + 0 ID=cds-TGC73577.1;Parent=gene-C9F09_28790;Dbxref=NCBI_GP:TGC73577.1;Name=TGC73577.1;end_range=1360,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456073.1;locus_tag=C9F09_28790;partial=true;product=electron transport complex subunit RsxC;protein_id=TGC73577.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000457.1 1 7888 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000457.1 Genbank region 1 7888 . + . ID=PYKB01000457.1:1..7888;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000457.1 Genbank gene 1 1452 . - . ID=gene-C9F09_05685;Name=C9F09_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05685;partial=true;start_range=.,1 PYKB01000457.1 Protein Homology CDS 1 1452 . - 0 ID=cds-TGC98501.1;Parent=gene-C9F09_05685;Dbxref=NCBI_GP:TGC98501.1;Name=TGC98501.1;Note=phosphorylates the response regulator SsrB%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=C9F09_05685;partial=true;product=hybrid sensor histidine kinase/response regulator;protein_id=TGC98501.1;start_range=.,1;transl_table=11 PYKB01000457.1 Genbank gene 1853 2254 . + . ID=gene-C9F09_05690;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=C9F09_05690 PYKB01000457.1 Protein Homology CDS 1853 2254 . + 0 ID=cds-TGC98494.1;Parent=gene-C9F09_05690;Dbxref=NCBI_GP:TGC98494.1;Name=TGC98494.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=C9F09_05690;product=SPI-2 type III secretion system protein SpiC;protein_id=TGC98494.1;transl_table=11 PYKB01000457.1 Genbank gene 2256 3749 . + . ID=gene-C9F09_05695;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=C9F09_05695 PYKB01000457.1 Protein Homology CDS 2256 3749 . + 0 ID=cds-TGC98495.1;Parent=gene-C9F09_05695;Dbxref=NCBI_GP:TGC98495.1;Name=TGC98495.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456134.1;locus_tag=C9F09_05695;product=SPI-2 type III secretion system protein SpiA;protein_id=TGC98495.1;transl_table=11 PYKB01000457.1 Genbank gene 3730 4941 . + . ID=gene-C9F09_05700;Name=C9F09_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05700 PYKB01000457.1 Protein Homology CDS 3730 4941 . + 0 ID=cds-TGC98496.1;Parent=gene-C9F09_05700;Dbxref=NCBI_GP:TGC98496.1;Name=TGC98496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456133.1;locus_tag=C9F09_05700;product=EscD/YscD/HrpQ family type III secretion system inner membrane ring protein;protein_id=TGC98496.1;transl_table=11 PYKB01000457.1 Genbank pseudogene 4949 5191 . + . ID=gene-C9F09_05705;Name=C9F09_05705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05705;pseudo=true PYKB01000457.1 Protein Homology CDS 4949 5191 . + 0 ID=cds-C9F09_05705;Parent=gene-C9F09_05705;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=C9F09_05705;product=EscE/YscE/SsaE family type III secretion system needle protein co-chaperone;pseudo=true;transl_table=11 PYKB01000457.1 Genbank gene 5455 5781 . + . ID=gene-C9F09_05710;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=C9F09_05710 PYKB01000457.1 Protein Homology CDS 5455 5781 . + 0 ID=cds-TGC98497.1;Parent=gene-C9F09_05710;Dbxref=NCBI_GP:TGC98497.1;Name=TGC98497.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456131.1;locus_tag=C9F09_05710;product=SPI-2 type III secretion system chaperone SseA;protein_id=TGC98497.1;transl_table=11 PYKB01000457.1 Genbank gene 5788 6378 . + . ID=gene-C9F09_05715;Name=C9F09_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05715 PYKB01000457.1 Protein Homology CDS 5788 6378 . + 0 ID=cds-TGC98498.1;Parent=gene-C9F09_05715;Dbxref=NCBI_GP:TGC98498.1;Name=TGC98498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456130.1;locus_tag=C9F09_05715;product=type III secretion system translocon protein SseB;protein_id=TGC98498.1;transl_table=11 PYKB01000457.1 Genbank gene 6375 6848 . + . ID=gene-C9F09_05720;Name=C9F09_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05720 PYKB01000457.1 Protein Homology CDS 6375 6848 . + 0 ID=cds-TGC98499.1;Parent=gene-C9F09_05720;Dbxref=NCBI_GP:TGC98499.1;Name=TGC98499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456129.1;locus_tag=C9F09_05720;product=CesD/SycD/LcrH family type III secretion system chaperone;protein_id=TGC98499.1;transl_table=11 PYKB01000457.1 Genbank gene 6851 7888 . + . ID=gene-C9F09_05725;Name=C9F09_05725;end_range=7888,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05725;partial=true PYKB01000457.1 Protein Homology CDS 6851 7888 . + 0 ID=cds-TGC98500.1;Parent=gene-C9F09_05725;Dbxref=NCBI_GP:TGC98500.1;Name=TGC98500.1;end_range=7888,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=C9F09_05725;partial=true;product=type III secretion system translocon protein;protein_id=TGC98500.1;transl_table=11 ##sequence-region PYKB01000376.1 1 1359 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000376.1 Genbank region 1 1359 . + . ID=PYKB01000376.1:1..1359;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000376.1 Genbank gene 1 500 . - . ID=gene-C9F09_04280;Name=C9F09_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04280;partial=true;start_range=.,1 PYKB01000376.1 Protein Homology CDS 1 500 . - 0 ID=cds-TGD00041.1;Parent=gene-C9F09_04280;Dbxref=NCBI_GP:TGD00041.1;Name=TGD00041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457084.1;locus_tag=C9F09_04280;partial=true;product=3-phenylpropionate MFS transporter;protein_id=TGD00041.1;start_range=.,1;transl_table=11 PYKB01000376.1 Genbank gene 696 1359 . - . ID=gene-C9F09_04285;Name=C9F09_04285;end_range=1359,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04285;partial=true PYKB01000376.1 Protein Homology CDS 696 1359 . - 1 ID=cds-TGD00042.1;Parent=gene-C9F09_04285;Dbxref=NCBI_GP:TGD00042.1;Name=TGD00042.1;end_range=1359,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=C9F09_04285;partial=true;product=serine hydroxymethyltransferase;protein_id=TGD00042.1;transl_table=11 ##sequence-region PYKB01000448.1 1 1354 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000448.1 Genbank region 1 1354 . + . ID=PYKB01000448.1:1..1354;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000448.1 Genbank gene 159 749 . - . ID=gene-C9F09_05560;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=C9F09_05560 PYKB01000448.1 Protein Homology CDS 159 749 . - 0 ID=cds-TGC98662.1;Parent=gene-C9F09_05560;Dbxref=NCBI_GP:TGC98662.1;Name=TGC98662.1;gbkey=CDS;gene=ribA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455786.1;locus_tag=C9F09_05560;product=GTP cyclohydrolase II;protein_id=TGC98662.1;transl_table=11 PYKB01000448.1 Genbank gene 945 1354 . + . ID=gene-C9F09_05565;Name=C9F09_05565;end_range=1354,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05565;partial=true PYKB01000448.1 Protein Homology CDS 945 1354 . + 0 ID=cds-TGC98663.1;Parent=gene-C9F09_05565;Dbxref=NCBI_GP:TGC98663.1;Name=TGC98663.1;end_range=1354,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455787.1;locus_tag=C9F09_05565;partial=true;product=phosphatidylglycerophosphatase B;protein_id=TGC98663.1;transl_table=11 ##sequence-region PYKB01000434.1 1 1354 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000434.1 Genbank region 1 1354 . + . ID=PYKB01000434.1:1..1354;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000434.1 Genbank pseudogene 1 258 . + . ID=gene-C9F09_05220;Name=C9F09_05220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05220;pseudo=true PYKB01000434.1 Protein Homology CDS 1 258 . + 0 ID=cds-C9F09_05220;Parent=gene-C9F09_05220;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=C9F09_05220;product=DUF1318 domain-containing protein;pseudo=true;transl_table=11 PYKB01000434.1 Genbank gene 403 999 . + . ID=gene-C9F09_05225;Name=C9F09_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05225 PYKB01000434.1 Protein Homology CDS 403 999 . + 0 ID=cds-TGC98910.1;Parent=gene-C9F09_05225;Dbxref=NCBI_GP:TGC98910.1;Name=TGC98910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000177492.1;locus_tag=C9F09_05225;product=hypothetical protein;protein_id=TGC98910.1;transl_table=11 PYKB01000434.1 Genbank pseudogene 996 1271 . + . ID=gene-C9F09_05230;Name=C9F09_05230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05230;pseudo=true PYKB01000434.1 Protein Homology CDS 996 1271 . + 0 ID=cds-C9F09_05230;Parent=gene-C9F09_05230;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156609.1;locus_tag=C9F09_05230;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001029.1 1 1351 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001029.1 Genbank region 1 1351 . + . ID=PYKB01001029.1:1..1351;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001029.1 Genbank gene 223 1351 . - . ID=gene-C9F09_17220;Name=C9F09_17220;end_range=1351,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17220;partial=true PYKB01001029.1 Protein Homology CDS 223 1351 . - 1 ID=cds-TGC87621.1;Parent=gene-C9F09_17220;Dbxref=NCBI_GP:TGC87621.1;Name=TGC87621.1;end_range=1351,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457012.1;locus_tag=C9F09_17220;partial=true;product=penicillin binding protein PBP4B;protein_id=TGC87621.1;transl_table=11 ##sequence-region PYKB01001448.1 1 1350 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001448.1 Genbank region 1 1350 . + . ID=PYKB01001448.1:1..1350;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001448.1 Genbank pseudogene 1 157 . + . ID=gene-C9F09_25155;Name=C9F09_25155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_25155;pseudo=true PYKB01001448.1 Protein Homology CDS 1 157 . + 1 ID=cds-C9F09_25155;Parent=gene-C9F09_25155;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00672.23;locus_tag=C9F09_25155;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001448.1 Genbank pseudogene 170 856 . + . ID=gene-C9F09_25160;Name=C9F09_25160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_25160;pseudo=true PYKB01001448.1 Protein Homology CDS 170 856 . + 0 ID=cds-C9F09_25160;Parent=gene-C9F09_25160;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001640754.1;locus_tag=C9F09_25160;product=histidine kinase;pseudo=true;transl_table=11 PYKB01001448.1 Genbank gene 853 1350 . + . ID=gene-C9F09_25165;Name=C9F09_25165;end_range=1350,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25165;partial=true PYKB01001448.1 Protein Homology CDS 853 1350 . + 0 ID=cds-TGC78300.1;Parent=gene-C9F09_25165;Dbxref=NCBI_GP:TGC78300.1;Name=TGC78300.1;Note=response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport;end_range=1350,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=C9F09_25165;partial=true;product=two-component system response regulator BaeR;protein_id=TGC78300.1;transl_table=11 ##sequence-region PYKB01000122.1 1 1286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000122.1 Genbank region 1 1286 . + . ID=PYKB01000122.1:1..1286;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000122.1 Genbank gene 1 152 . - . ID=gene-C9F09_01420;Name=C9F09_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01420;partial=true;start_range=.,1 PYKB01000122.1 Protein Homology CDS 1 152 . - 0 ID=cds-TGD05025.1;Parent=gene-C9F09_01420;Dbxref=NCBI_GP:TGD05025.1;Name=TGD05025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308277.1;locus_tag=C9F09_01420;partial=true;product=class II glutamine amidotransferase;protein_id=TGD05025.1;start_range=.,1;transl_table=11 PYKB01000122.1 Genbank gene 365 943 . - . ID=gene-C9F09_01425;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=C9F09_01425 PYKB01000122.1 Protein Homology CDS 365 943 . - 0 ID=cds-TGD05024.1;Parent=gene-C9F09_01425;Dbxref=NCBI_GP:TGD05024.1;Name=TGD05024.1;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;gbkey=CDS;gene=gmhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458774.1;locus_tag=C9F09_01425;product=phosphoheptose isomerase;protein_id=TGD05024.1;transl_table=11 ##sequence-region PYKB01001734.1 1 1344 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001734.1 Genbank region 1 1344 . + . ID=PYKB01001734.1:1..1344;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001734.1 Genbank gene 1 1156 . - . ID=gene-C9F09_30380;Name=mmsA;gbkey=Gene;gene=mmsA;gene_biotype=protein_coding;locus_tag=C9F09_30380;partial=true;start_range=.,1 PYKB01001734.1 Protein Homology CDS 1 1156 . - 0 ID=cds-TGC71027.1;Parent=gene-C9F09_30380;Dbxref=NCBI_GP:TGC71027.1;Name=TGC71027.1;gbkey=CDS;gene=mmsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463282.1;locus_tag=C9F09_30380;partial=true;product=methylmalonate-semialdehyde dehydrogenase (CoA acylating);protein_id=TGC71027.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001659.1 1 1341 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001659.1 Genbank region 1 1341 . + . ID=PYKB01001659.1:1..1341;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001659.1 Genbank gene 1 188 . - . ID=gene-C9F09_28905;Name=C9F09_28905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28905;partial=true;start_range=.,1 PYKB01001659.1 Protein Homology CDS 1 188 . - 0 ID=cds-TGC73310.1;Parent=gene-C9F09_28905;Dbxref=NCBI_GP:TGC73310.1;Name=TGC73310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458551.1;locus_tag=C9F09_28905;partial=true;product=hypothetical protein;protein_id=TGC73310.1;start_range=.,1;transl_table=11 PYKB01001659.1 Genbank gene 320 1341 . - . ID=gene-C9F09_28910;Name=C9F09_28910;end_range=1341,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28910;partial=true PYKB01001659.1 Protein Homology CDS 320 1341 . - 2 ID=cds-TGC73311.1;Parent=gene-C9F09_28910;Dbxref=NCBI_GP:TGC73311.1;Name=TGC73311.1;end_range=1341,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458552.1;locus_tag=C9F09_28910;partial=true;product=excinuclease ABC subunit UvrA;protein_id=TGC73311.1;transl_table=11 ##sequence-region PYKB01001387.1 1 1339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001387.1 Genbank region 1 1339 . + . ID=PYKB01001387.1:1..1339;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001387.1 Genbank gene 1 894 . - . ID=gene-C9F09_23895;Name=C9F09_23895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23895;partial=true;start_range=.,1 PYKB01001387.1 Protein Homology CDS 1 894 . - 0 ID=cds-TGC79751.1;Parent=gene-C9F09_23895;Dbxref=NCBI_GP:TGC79751.1;Name=TGC79751.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=C9F09_23895;partial=true;product=3-oxoacyl-ACP synthase;protein_id=TGC79751.1;start_range=.,1;transl_table=11 PYKB01001387.1 Genbank gene 974 1339 . - . ID=gene-C9F09_23900;Name=C9F09_23900;end_range=1339,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23900;partial=true PYKB01001387.1 Protein Homology CDS 974 1339 . - 0 ID=cds-TGC79752.1;Parent=gene-C9F09_23900;Dbxref=NCBI_GP:TGC79752.1;Name=TGC79752.1;end_range=1339,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455685.1;locus_tag=C9F09_23900;partial=true;product=phosphate acyltransferase;protein_id=TGC79752.1;transl_table=11 ##sequence-region PYKB01001573.1 1 1338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001573.1 Genbank region 1 1338 . + . ID=PYKB01001573.1:1..1338;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001573.1 Genbank gene 1 801 . + . ID=gene-C9F09_27475;Name=C9F09_27475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27475;partial=true;start_range=.,1 PYKB01001573.1 Protein Homology CDS 1 801 . + 0 ID=cds-TGC75478.1;Parent=gene-C9F09_27475;Dbxref=NCBI_GP:TGC75478.1;Name=TGC75478.1;Note=CobD%3B CbiB in Salmonella%3B converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=C9F09_27475;partial=true;product=cobalamin biosynthesis protein CobD;protein_id=TGC75478.1;start_range=.,1;transl_table=11 PYKB01001573.1 Genbank gene 812 1338 . + . ID=gene-C9F09_27480;Name=C9F09_27480;end_range=1338,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27480;partial=true PYKB01001573.1 Protein Homology CDS 812 1338 . + 0 ID=cds-TGC75479.1;Parent=gene-C9F09_27480;Dbxref=NCBI_GP:TGC75479.1;Name=TGC75479.1;end_range=1338,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=C9F09_27480;partial=true;product=cobalt-precorrin-8 methylmutase;protein_id=TGC75479.1;transl_table=11 ##sequence-region PYKB01001165.1 1 7832 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001165.1 Genbank region 1 7832 . + . ID=PYKB01001165.1:1..7832;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001165.1 Genbank pseudogene 67 282 . - . ID=gene-C9F09_19675;Name=C9F09_19675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_19675;pseudo=true PYKB01001165.1 Protein Homology CDS 67 282 . - 0 ID=cds-C9F09_19675;Parent=gene-C9F09_19675;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463076.1;locus_tag=C9F09_19675;product=phage tail protein;pseudo=true;transl_table=11 PYKB01001165.1 Genbank gene 379 507 . - . ID=gene-C9F09_19680;Name=C9F09_19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19680 PYKB01001165.1 Protein Homology CDS 379 507 . - 0 ID=cds-TGC84385.1;Parent=gene-C9F09_19680;Dbxref=NCBI_GP:TGC84385.1;Name=TGC84385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728452.1;locus_tag=C9F09_19680;product=GpE family phage tail protein;protein_id=TGC84385.1;transl_table=11 PYKB01001165.1 Genbank gene 467 784 . - . ID=gene-C9F09_19685;Name=C9F09_19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19685 PYKB01001165.1 Protein Homology CDS 467 784 . - 0 ID=cds-TGC84386.1;Parent=gene-C9F09_19685;Dbxref=NCBI_GP:TGC84386.1;Name=TGC84386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001003637.1;locus_tag=C9F09_19685;product=phage tail assembly protein;protein_id=TGC84386.1;transl_table=11 PYKB01001165.1 Genbank gene 836 1360 . - . ID=gene-C9F09_19690;Name=C9F09_19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19690 PYKB01001165.1 Protein Homology CDS 836 1360 . - 0 ID=cds-TGC84387.1;Parent=gene-C9F09_19690;Dbxref=NCBI_GP:TGC84387.1;Name=TGC84387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463077.1;locus_tag=C9F09_19690;product=phage major tail tube protein;protein_id=TGC84387.1;transl_table=11 PYKB01001165.1 Genbank gene 1360 2784 . - . ID=gene-C9F09_19695;Name=C9F09_19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19695 PYKB01001165.1 Protein Homology CDS 1360 2784 . - 0 ID=cds-TGC84388.1;Parent=gene-C9F09_19695;Dbxref=NCBI_GP:TGC84388.1;Name=TGC84388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463078.1;locus_tag=C9F09_19695;product=phage tail sheath family protein;protein_id=TGC84388.1;transl_table=11 PYKB01001165.1 Genbank gene 2774 2971 . - . ID=gene-C9F09_19700;Name=C9F09_19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19700 PYKB01001165.1 Protein Homology CDS 2774 2971 . - 0 ID=cds-TGC84389.1;Parent=gene-C9F09_19700;Dbxref=NCBI_GP:TGC84389.1;Name=TGC84389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463079.1;locus_tag=C9F09_19700;product=hypothetical protein;protein_id=TGC84389.1;transl_table=11 PYKB01001165.1 Genbank gene 2968 3423 . - . ID=gene-C9F09_19705;Name=C9F09_19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19705 PYKB01001165.1 Protein Homology CDS 2968 3423 . - 0 ID=cds-TGC84390.1;Parent=gene-C9F09_19705;Dbxref=NCBI_GP:TGC84390.1;Name=TGC84390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463080.1;locus_tag=C9F09_19705;product=hypothetical protein;protein_id=TGC84390.1;transl_table=11 PYKB01001165.1 Genbank gene 3583 3897 . - . ID=gene-C9F09_19710;Name=C9F09_19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19710 PYKB01001165.1 Protein Homology CDS 3583 3897 . - 0 ID=cds-TGC84391.1;Parent=gene-C9F09_19710;Dbxref=NCBI_GP:TGC84391.1;Name=TGC84391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463081.1;locus_tag=C9F09_19710;product=hypothetical protein;protein_id=TGC84391.1;transl_table=11 PYKB01001165.1 Genbank gene 3910 4515 . - . ID=gene-C9F09_19715;Name=C9F09_19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19715 PYKB01001165.1 Protein Homology CDS 3910 4515 . - 0 ID=cds-TGC84392.1;Parent=gene-C9F09_19715;Dbxref=NCBI_GP:TGC84392.1;Name=TGC84392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463082.1;locus_tag=C9F09_19715;product=lytic murein transglycosylase;protein_id=TGC84392.1;transl_table=11 PYKB01001165.1 Genbank gene 4518 4805 . - . ID=gene-C9F09_19720;Name=C9F09_19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19720 PYKB01001165.1 Protein Homology CDS 4518 4805 . - 0 ID=cds-TGC84393.1;Parent=gene-C9F09_19720;Dbxref=NCBI_GP:TGC84393.1;Name=TGC84393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463083.1;locus_tag=C9F09_19720;product=hypothetical protein;protein_id=TGC84393.1;transl_table=11 PYKB01001165.1 Genbank gene 5382 5729 . + . ID=gene-C9F09_19725;Name=C9F09_19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19725 PYKB01001165.1 Protein Homology CDS 5382 5729 . + 0 ID=cds-TGC84394.1;Parent=gene-C9F09_19725;Dbxref=NCBI_GP:TGC84394.1;Name=TGC84394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615246.1;locus_tag=C9F09_19725;product=DNA-binding protein;protein_id=TGC84394.1;transl_table=11 PYKB01001165.1 Genbank gene 5860 7209 . - . ID=gene-C9F09_19730;Name=C9F09_19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19730 PYKB01001165.1 Protein Homology CDS 5860 7209 . - 0 ID=cds-TGC84395.1;Parent=gene-C9F09_19730;Dbxref=NCBI_GP:TGC84395.1;Name=TGC84395.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458518.1;locus_tag=C9F09_19730;product=lysine-sensitive aspartokinase 3;protein_id=TGC84395.1;transl_table=11 PYKB01001165.1 Genbank gene 7554 7832 . + . ID=gene-C9F09_19735;Name=pgi;end_range=7832,.;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=C9F09_19735;partial=true PYKB01001165.1 Protein Homology CDS 7554 7832 . + 0 ID=cds-TGC84396.1;Parent=gene-C9F09_19735;Dbxref=NCBI_GP:TGC84396.1;Name=TGC84396.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;end_range=7832,.;gbkey=CDS;gene=pgi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458519.1;locus_tag=C9F09_19735;partial=true;product=glucose-6-phosphate isomerase;protein_id=TGC84396.1;transl_table=11 ##sequence-region PYKB01000481.1 1 1335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000481.1 Genbank region 1 1335 . + . ID=PYKB01000481.1:1..1335;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000481.1 Genbank pseudogene 1 243 . + . ID=gene-C9F09_06040;Name=C9F09_06040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_06040;pseudo=true PYKB01000481.1 Protein Homology CDS 1 243 . + 1 ID=cds-C9F09_06040;Parent=gene-C9F09_06040;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947287.1;locus_tag=C9F09_06040;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000481.1 Genbank gene 490 1335 . + . ID=gene-C9F09_06045;Name=C9F09_06045;end_range=1335,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06045;partial=true PYKB01000481.1 Protein Homology CDS 490 1335 . + 0 ID=cds-TGC98051.1;Parent=gene-C9F09_06045;Dbxref=NCBI_GP:TGC98051.1;Name=TGC98051.1;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;end_range=1335,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=C9F09_06045;partial=true;product=quinolinate synthase;protein_id=TGC98051.1;transl_table=11 ##sequence-region PYKB01000877.1 1 1334 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000877.1 Genbank region 1 1334 . + . ID=PYKB01000877.1:1..1334;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000877.1 Genbank gene 1 1334 . + . ID=gene-C9F09_14305;Name=C9F09_14305;end_range=1334,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14305;partial=true;start_range=.,1 PYKB01000877.1 Protein Homology CDS 1 1334 . + 2 ID=cds-TGC90660.1;Parent=gene-C9F09_14305;Dbxref=NCBI_GP:TGC90660.1;Name=TGC90660.1;end_range=1334,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=C9F09_14305;partial=true;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=TGC90660.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001182.1 1 1334 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001182.1 Genbank region 1 1334 . + . ID=PYKB01001182.1:1..1334;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001182.1 Genbank gene 1 473 . - . ID=gene-C9F09_20070;Name=C9F09_20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20070;partial=true;start_range=.,1 PYKB01001182.1 Protein Homology CDS 1 473 . - 0 ID=cds-TGC83962.1;Parent=gene-C9F09_20070;Dbxref=NCBI_GP:TGC83962.1;Name=TGC83962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456593.1;locus_tag=C9F09_20070;partial=true;product=hypothetical protein;protein_id=TGC83962.1;start_range=.,1;transl_table=11 PYKB01001182.1 Genbank gene 489 1010 . - . ID=gene-C9F09_20075;Name=C9F09_20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20075 PYKB01001182.1 Protein Homology CDS 489 1010 . - 0 ID=cds-TGC83963.1;Parent=gene-C9F09_20075;Dbxref=NCBI_GP:TGC83963.1;Name=TGC83963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=C9F09_20075;product=propanediol dehydratase small subunit PduE;protein_id=TGC83963.1;transl_table=11 PYKB01001182.1 Genbank gene 1025 1334 . - . ID=gene-C9F09_20080;Name=pduD;end_range=1334,.;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=C9F09_20080;partial=true PYKB01001182.1 Protein Homology CDS 1025 1334 . - 1 ID=cds-TGC83964.1;Parent=gene-C9F09_20080;Dbxref=NCBI_GP:TGC83964.1;Name=TGC83964.1;Note=with PduCE catalyzes the formation of propionaldehyde from 1%2C2-propanediol;end_range=1334,.;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=C9F09_20080;partial=true;product=propanediol dehydratase;protein_id=TGC83964.1;transl_table=11 ##sequence-region PYKB01001475.1 1 1331 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001475.1 Genbank region 1 1331 . + . ID=PYKB01001475.1:1..1331;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001475.1 Genbank pseudogene 87 698 . + . ID=gene-C9F09_25670;Name=C9F09_25670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_25670;pseudo=true PYKB01001475.1 Protein Homology CDS 87 698 . + 0 ID=cds-C9F09_25670;Parent=gene-C9F09_25670;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=C9F09_25670;product=sensor domain-containing phosphodiesterase;pseudo=true;transl_table=11 PYKB01001475.1 Genbank gene 734 1331 . - . ID=gene-C9F09_25675;Name=C9F09_25675;end_range=1331,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25675;partial=true PYKB01001475.1 Protein Homology CDS 734 1331 . - 1 ID=cds-TGC77726.1;Parent=gene-C9F09_25675;Dbxref=NCBI_GP:TGC77726.1;Name=TGC77726.1;end_range=1331,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457037.1;locus_tag=C9F09_25675;partial=true;product=exopolyphosphatase;protein_id=TGC77726.1;transl_table=11 ##sequence-region PYKB01000464.1 1 1331 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000464.1 Genbank region 1 1331 . + . ID=PYKB01000464.1:1..1331;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000464.1 Genbank gene 3 75 . - . ID=gene-C9F09_05790;Name=C9F09_05790;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_05790 PYKB01000464.1 tRNAscan-SE tRNA 3 75 . - . ID=rna-C9F09_05790;Parent=gene-C9F09_05790;anticodon=(pos:complement(40..42));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_05790;product=tRNA-Asn PYKB01000464.1 tRNAscan-SE exon 3 75 . - . ID=exon-C9F09_05790-1;Parent=rna-C9F09_05790;anticodon=(pos:complement(40..42));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_05790;product=tRNA-Asn PYKB01000464.1 Genbank gene 176 973 . - . ID=gene-C9F09_05795;Name=C9F09_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05795 PYKB01000464.1 Protein Homology CDS 176 973 . - 0 ID=cds-TGC98407.1;Parent=gene-C9F09_05795;Dbxref=NCBI_GP:TGC98407.1;Name=TGC98407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=C9F09_05795;product=protein MtfA;protein_id=TGC98407.1;transl_table=11 PYKB01000464.1 Genbank gene 1062 1151 . + . ID=gene-C9F09_05800;Name=C9F09_05800;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_05800 PYKB01000464.1 tRNAscan-SE tRNA 1062 1151 . + . ID=rna-C9F09_05800;Parent=gene-C9F09_05800;anticodon=(pos:1096..1098);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_05800;product=tRNA-Ser PYKB01000464.1 tRNAscan-SE exon 1062 1151 . + . ID=exon-C9F09_05800-1;Parent=rna-C9F09_05800;anticodon=(pos:1096..1098);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_05800;product=tRNA-Ser ##sequence-region PYKB01001018.1 1 1327 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001018.1 Genbank region 1 1327 . + . ID=PYKB01001018.1:1..1327;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001018.1 Genbank gene 1 241 . + . ID=gene-C9F09_17030;Name=C9F09_17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17030;partial=true;start_range=.,1 PYKB01001018.1 Protein Homology CDS 1 241 . + 1 ID=cds-TGC87846.1;Parent=gene-C9F09_17030;Dbxref=NCBI_GP:TGC87846.1;Name=TGC87846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=C9F09_17030;partial=true;product=RnfH family protein;protein_id=TGC87846.1;start_range=.,1;transl_table=11 PYKB01001018.1 Genbank gene 407 745 . - . ID=gene-C9F09_17035;Name=C9F09_17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17035 PYKB01001018.1 Protein Homology CDS 407 745 . - 0 ID=cds-TGC87847.1;Parent=gene-C9F09_17035;Dbxref=NCBI_GP:TGC87847.1;Name=TGC87847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457154.1;locus_tag=C9F09_17035;product=outer membrane protein assembly factor BamE;protein_id=TGC87847.1;transl_table=11 PYKB01001018.1 Genbank gene 894 1327 . - . ID=gene-C9F09_17040;Name=C9F09_17040;end_range=1327,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17040;partial=true PYKB01001018.1 Protein Homology CDS 894 1327 . - 2 ID=cds-TGC87848.1;Parent=gene-C9F09_17040;Dbxref=NCBI_GP:TGC87848.1;Name=TGC87848.1;end_range=1327,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457153.1;locus_tag=C9F09_17040;partial=true;product=DNA repair protein RecN;protein_id=TGC87848.1;transl_table=11 ##sequence-region PYKB01000987.1 1 1324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000987.1 Genbank region 1 1324 . + . ID=PYKB01000987.1:1..1324;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000987.1 Genbank gene 1 1324 . + . ID=gene-C9F09_16445;Name=C9F09_16445;end_range=1324,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16445;partial=true;start_range=.,1 PYKB01000987.1 Protein Homology CDS 1 1324 . + 0 ID=cds-TGC88434.1;Parent=gene-C9F09_16445;Dbxref=NCBI_GP:TGC88434.1;Name=TGC88434.1;end_range=1324,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456726.1;locus_tag=C9F09_16445;partial=true;product=beta-glucosidase BglX;protein_id=TGC88434.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001465.1 1 1324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001465.1 Genbank region 1 1324 . + . ID=PYKB01001465.1:1..1324;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001465.1 Genbank gene 1 511 . + . ID=gene-C9F09_25520;Name=C9F09_25520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25520;partial=true;start_range=.,1 PYKB01001465.1 Protein Homology CDS 1 511 . + 1 ID=cds-TGC77924.1;Parent=gene-C9F09_25520;Dbxref=NCBI_GP:TGC77924.1;Name=TGC77924.1;Note=catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456196.1;locus_tag=C9F09_25520;partial=true;product=6-phospho-beta-glucosidase;protein_id=TGC77924.1;start_range=.,1;transl_table=11 PYKB01001465.1 Genbank gene 524 1324 . + . ID=gene-C9F09_25525;Name=C9F09_25525;end_range=1324,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25525;partial=true PYKB01001465.1 Protein Homology CDS 524 1324 . + 0 ID=cds-TGC77925.1;Parent=gene-C9F09_25525;Dbxref=NCBI_GP:TGC77925.1;Name=TGC77925.1;end_range=1324,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310466.1;locus_tag=C9F09_25525;partial=true;product=chitin disaccharide deacetylase;protein_id=TGC77925.1;transl_table=11 ##sequence-region PYKB01000669.1 1 1323 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000669.1 Genbank region 1 1323 . + . ID=PYKB01000669.1:1..1323;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000669.1 Genbank pseudogene 62 316 . - . ID=gene-C9F09_10040;Name=C9F09_10040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10040;pseudo=true PYKB01000669.1 Protein Homology CDS 62 316 . - 0 ID=cds-C9F09_10040;Parent=gene-C9F09_10040;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455089.1;locus_tag=C9F09_10040;product=MFS transporter;pseudo=true;transl_table=11 PYKB01000669.1 Genbank gene 489 1323 . + . ID=gene-C9F09_10045;Name=ushA;end_range=1323,.;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=C9F09_10045;partial=true PYKB01000669.1 Protein Homology CDS 489 1323 . + 0 ID=cds-TGC94076.1;Parent=gene-C9F09_10045;Dbxref=NCBI_GP:TGC94076.1;Name=TGC94076.1;Note=catalyzes the degradation of periplasmic UDP-glucose to uridine%2C glucose-1-phosphate and inorganic phosphate%3B specific for uridine nucleotides;end_range=1323,.;gbkey=CDS;gene=ushA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=C9F09_10045;partial=true;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=TGC94076.1;transl_table=11 ##sequence-region PYKB01001506.1 1 1322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001506.1 Genbank region 1 1322 . + . ID=PYKB01001506.1:1..1322;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001506.1 Genbank gene 1 413 . + . ID=gene-C9F09_26130;Name=C9F09_26130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26130;partial=true;start_range=.,1 PYKB01001506.1 Protein Homology CDS 1 413 . + 2 ID=cds-TGC77127.1;Parent=gene-C9F09_26130;Dbxref=NCBI_GP:TGC77127.1;Name=TGC77127.1;Note=catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=C9F09_26130;partial=true;product=thiamine-phosphate kinase;protein_id=TGC77127.1;start_range=.,1;transl_table=11 PYKB01001506.1 Genbank gene 391 906 . + . ID=gene-C9F09_26135;Name=C9F09_26135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26135 PYKB01001506.1 Protein Homology CDS 391 906 . + 0 ID=cds-TGC77128.1;Parent=gene-C9F09_26135;Dbxref=NCBI_GP:TGC77128.1;Name=TGC77128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455014.1;locus_tag=C9F09_26135;product=phosphatidylglycerophosphatase A;protein_id=TGC77128.1;transl_table=11 PYKB01001506.1 Genbank gene 1010 1322 . - . ID=gene-C9F09_26140;Name=C9F09_26140;end_range=1322,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26140;partial=true PYKB01001506.1 Protein Homology CDS 1010 1322 . - 1 ID=cds-TGC77129.1;Parent=gene-C9F09_26140;Dbxref=NCBI_GP:TGC77129.1;Name=TGC77129.1;end_range=1322,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455015.1;locus_tag=C9F09_26140;partial=true;product=aldo/keto reductase;protein_id=TGC77129.1;transl_table=11 ##sequence-region PYKB01000510.1 1 7738 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000510.1 Genbank region 1 7738 . + . ID=PYKB01000510.1:1..7738;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000510.1 Genbank gene 1 982 . + . ID=gene-C9F09_06650;Name=C9F09_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06650;partial=true;start_range=.,1 PYKB01000510.1 Protein Homology CDS 1 982 . + 1 ID=cds-TGC97379.1;Parent=gene-C9F09_06650;Dbxref=NCBI_GP:TGC97379.1;Name=TGC97379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=C9F09_06650;partial=true;product=oxidoreductase;protein_id=TGC97379.1;start_range=.,1;transl_table=11 PYKB01000510.1 Genbank gene 1253 2221 . + . ID=gene-C9F09_06655;Name=C9F09_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06655 PYKB01000510.1 Protein Homology CDS 1253 2221 . + 0 ID=cds-TGC97380.1;Parent=gene-C9F09_06655;Dbxref=NCBI_GP:TGC97380.1;Name=TGC97380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=C9F09_06655;product=hypothetical protein;protein_id=TGC97380.1;transl_table=11 PYKB01000510.1 Genbank gene 2476 3720 . + . ID=gene-C9F09_06660;Name=C9F09_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06660 PYKB01000510.1 Protein Homology CDS 2476 3720 . + 0 ID=cds-TGC97381.1;Parent=gene-C9F09_06660;Dbxref=NCBI_GP:TGC97381.1;Name=TGC97381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=C9F09_06660;product=serine/threonine transporter SstT;protein_id=TGC97381.1;transl_table=11 PYKB01000510.1 Genbank gene 3717 3917 . - . ID=gene-C9F09_06665;Name=C9F09_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06665 PYKB01000510.1 Protein Homology CDS 3717 3917 . - 0 ID=cds-TGC97382.1;Parent=gene-C9F09_06665;Dbxref=NCBI_GP:TGC97382.1;Name=TGC97382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751451.1;locus_tag=C9F09_06665;product=hypothetical protein;protein_id=TGC97382.1;transl_table=11 PYKB01000510.1 Genbank gene 4170 4832 . + . ID=gene-C9F09_06670;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=C9F09_06670 PYKB01000510.1 Protein Homology CDS 4170 4832 . + 0 ID=cds-TGC97383.1;Parent=gene-C9F09_06670;Dbxref=NCBI_GP:TGC97383.1;Name=TGC97383.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=C9F09_06670;product=DedA family general envelope maintenance protein YqjA;protein_id=TGC97383.1;transl_table=11 PYKB01000510.1 Genbank gene 4836 5219 . + . ID=gene-C9F09_06675;Name=C9F09_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06675 PYKB01000510.1 Protein Homology CDS 4836 5219 . + 0 ID=cds-TGC97384.1;Parent=gene-C9F09_06675;Dbxref=NCBI_GP:TGC97384.1;Name=TGC97384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457616.1;locus_tag=C9F09_06675;product=EnvZ/OmpR regulon moderator;protein_id=TGC97384.1;transl_table=11 PYKB01000510.1 Genbank gene 5364 5732 . + . ID=gene-C9F09_06680;Name=C9F09_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06680 PYKB01000510.1 Protein Homology CDS 5364 5732 . + 0 ID=cds-TGC97385.1;Parent=gene-C9F09_06680;Dbxref=NCBI_GP:TGC97385.1;Name=TGC97385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457617.1;locus_tag=C9F09_06680;product=DUF1090 domain-containing protein;protein_id=TGC97385.1;transl_table=11 PYKB01000510.1 Genbank gene 5774 6079 . + . ID=gene-C9F09_06685;Name=C9F09_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06685 PYKB01000510.1 Protein Homology CDS 5774 6079 . + 0 ID=cds-TGC97386.1;Parent=gene-C9F09_06685;Dbxref=NCBI_GP:TGC97386.1;Name=TGC97386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457618.1;locus_tag=C9F09_06685;product=hypothetical protein;protein_id=TGC97386.1;transl_table=11 PYKB01000510.1 Genbank gene 6082 6480 . + . ID=gene-C9F09_06690;Name=C9F09_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06690 PYKB01000510.1 Protein Homology CDS 6082 6480 . + 0 ID=cds-TGC97387.1;Parent=gene-C9F09_06690;Dbxref=NCBI_GP:TGC97387.1;Name=TGC97387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457619.1;locus_tag=C9F09_06690;product=hypothetical protein;protein_id=TGC97387.1;transl_table=11 PYKB01000510.1 Genbank gene 6477 6776 . + . ID=gene-C9F09_06695;Name=C9F09_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06695 PYKB01000510.1 Protein Homology CDS 6477 6776 . + 0 ID=cds-TGC97388.1;Parent=gene-C9F09_06695;Dbxref=NCBI_GP:TGC97388.1;Name=TGC97388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457620.1;locus_tag=C9F09_06695;product=hypothetical protein;protein_id=TGC97388.1;transl_table=11 PYKB01000510.1 Genbank gene 6921 7406 . + . ID=gene-C9F09_06700;Name=C9F09_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06700 PYKB01000510.1 Protein Homology CDS 6921 7406 . + 0 ID=cds-TGC97389.1;Parent=gene-C9F09_06700;Dbxref=NCBI_GP:TGC97389.1;Name=TGC97389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462146.1;locus_tag=C9F09_06700;product=DoxX family protein;protein_id=TGC97389.1;transl_table=11 PYKB01000510.1 Genbank gene 7474 7738 . + . ID=gene-C9F09_06705;Name=C9F09_06705;end_range=7738,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06705;partial=true PYKB01000510.1 Protein Homology CDS 7474 7738 . + 0 ID=cds-TGC97390.1;Parent=gene-C9F09_06705;Dbxref=NCBI_GP:TGC97390.1;Name=TGC97390.1;end_range=7738,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457622.1;locus_tag=C9F09_06705;partial=true;product=hypothetical protein;protein_id=TGC97390.1;transl_table=11 ##sequence-region PYKB01000455.1 1 1321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000455.1 Genbank region 1 1321 . + . ID=PYKB01000455.1:1..1321;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000455.1 Genbank gene 1 371 . - . ID=gene-C9F09_05670;Name=C9F09_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05670;partial=true;start_range=.,1 PYKB01000455.1 Protein Homology CDS 1 371 . - 0 ID=cds-TGC98515.1;Parent=gene-C9F09_05670;Dbxref=NCBI_GP:TGC98515.1;Name=TGC98515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=C9F09_05670;partial=true;product=methyl-accepting chemotaxis protein;protein_id=TGC98515.1;start_range=.,1;transl_table=11 PYKB01000455.1 Genbank gene 678 1172 . - . ID=gene-C9F09_05675;Name=C9F09_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05675 PYKB01000455.1 Protein Homology CDS 678 1172 . - 0 ID=cds-TGC98516.1;Parent=gene-C9F09_05675;Dbxref=NCBI_GP:TGC98516.1;Name=TGC98516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=C9F09_05675;product=TIGR00645 family protein;protein_id=TGC98516.1;transl_table=11 ##sequence-region PYKB01000482.1 1 1321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000482.1 Genbank region 1 1321 . + . ID=PYKB01000482.1:1..1321;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000482.1 Genbank pseudogene 60 479 . - . ID=gene-C9F09_06050;Name=mdoD;gbkey=Gene;gene=mdoD;gene_biotype=pseudogene;gene_synonym=opgD;locus_tag=C9F09_06050;pseudo=true PYKB01000482.1 Protein Homology CDS 60 479 . - 0 ID=cds-C9F09_06050;Parent=gene-C9F09_06050;Note=involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=mdoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=C9F09_06050;product=glucan biosynthesis protein D;pseudo=true;transl_table=11 PYKB01000482.1 Genbank gene 699 1321 . - . ID=gene-C9F09_06055;Name=C9F09_06055;end_range=1321,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06055;partial=true PYKB01000482.1 Protein Homology CDS 699 1321 . - 2 ID=cds-TGC98038.1;Parent=gene-C9F09_06055;Dbxref=NCBI_GP:TGC98038.1;Name=TGC98038.1;end_range=1321,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=C9F09_06055;partial=true;product=carboxylesterase;protein_id=TGC98038.1;transl_table=11 ##sequence-region PYKB01000459.1 1 1321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000459.1 Genbank region 1 1321 . + . ID=PYKB01000459.1:1..1321;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000459.1 Genbank gene 35 445 . + . ID=gene-C9F09_05740;Name=C9F09_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05740 PYKB01000459.1 Protein Homology CDS 35 445 . + 0 ID=cds-TGC98478.1;Parent=gene-C9F09_05740;Dbxref=NCBI_GP:TGC98478.1;Name=TGC98478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455193.1;locus_tag=C9F09_05740;product=nucleoside diphosphate kinase regulator;protein_id=TGC98478.1;transl_table=11 PYKB01000459.1 Genbank gene 528 1307 . - . ID=gene-C9F09_05745;Name=C9F09_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05745 PYKB01000459.1 Protein Homology CDS 528 1307 . - 0 ID=cds-TGC98477.1;Parent=gene-C9F09_05745;Dbxref=NCBI_GP:TGC98477.1;Name=TGC98477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001448219.1;locus_tag=C9F09_05745;product=alcohol dehydrogenase;protein_id=TGC98477.1;transl_table=11 ##sequence-region PYKB01001175.1 1 1319 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001175.1 Genbank region 1 1319 . + . ID=PYKB01001175.1:1..1319;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001175.1 Genbank gene 106 321 . - . ID=gene-C9F09_19825;Name=C9F09_19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19825 PYKB01001175.1 Protein Homology CDS 106 321 . - 0 ID=cds-TGC84157.1;Parent=gene-C9F09_19825;Dbxref=NCBI_GP:TGC84157.1;Name=TGC84157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518805.1;locus_tag=C9F09_19825;product=hypothetical protein;protein_id=TGC84157.1;transl_table=11 PYKB01001175.1 Genbank gene 358 1319 . - . ID=gene-C9F09_19830;Name=astE;end_range=1319,.;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=C9F09_19830;partial=true PYKB01001175.1 Protein Homology CDS 358 1319 . - 2 ID=cds-TGC84158.1;Parent=gene-C9F09_19830;Dbxref=NCBI_GP:TGC84158.1;Name=TGC84158.1;end_range=1319,.;gbkey=CDS;gene=astE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456205.1;locus_tag=C9F09_19830;partial=true;product=succinylglutamate desuccinylase;protein_id=TGC84158.1;transl_table=11 ##sequence-region PYKB01000477.1 1 1319 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000477.1 Genbank region 1 1319 . + . ID=PYKB01000477.1:1..1319;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000477.1 Genbank gene 1 199 . + . ID=gene-C9F09_05985;Name=C9F09_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05985;partial=true;start_range=.,1 PYKB01000477.1 Protein Homology CDS 1 199 . + 1 ID=cds-TGC98134.1;Parent=gene-C9F09_05985;Dbxref=NCBI_GP:TGC98134.1;Name=TGC98134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344195.1;locus_tag=C9F09_05985;partial=true;product=hypothetical protein;protein_id=TGC98134.1;start_range=.,1;transl_table=11 PYKB01000477.1 Genbank gene 212 1288 . + . ID=gene-C9F09_05990;Name=C9F09_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05990 PYKB01000477.1 Protein Homology CDS 212 1288 . + 0 ID=cds-TGC98135.1;Parent=gene-C9F09_05990;Dbxref=NCBI_GP:TGC98135.1;Name=TGC98135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001214119.1;locus_tag=C9F09_05990;product=hydrolase;protein_id=TGC98135.1;transl_table=11 ##sequence-region PYKB01001230.1 1 1311 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001230.1 Genbank region 1 1311 . + . ID=PYKB01001230.1:1..1311;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001230.1 Genbank gene 1 1311 . + . ID=gene-C9F09_20810;Name=C9F09_20810;end_range=1311,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20810;partial=true;start_range=.,1 PYKB01001230.1 Protein Homology CDS 1 1311 . + 2 ID=cds-TGC82905.1;Parent=gene-C9F09_20810;Dbxref=NCBI_GP:TGC82905.1;Name=TGC82905.1;end_range=1311,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=C9F09_20810;partial=true;product=dimethyl sulfoxide reductase subunit A;protein_id=TGC82905.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001050.1 1 1309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001050.1 Genbank region 1 1309 . + . ID=PYKB01001050.1:1..1309;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001050.1 Genbank gene 10 903 . - . ID=gene-C9F09_17645;Name=C9F09_17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17645 PYKB01001050.1 Protein Homology CDS 10 903 . - 0 ID=cds-TGC87084.1;Parent=gene-C9F09_17645;Dbxref=NCBI_GP:TGC87084.1;Name=TGC87084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456926.1;locus_tag=C9F09_17645;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=TGC87084.1;transl_table=11 PYKB01001050.1 Genbank pseudogene 1069 1203 . + . ID=gene-C9F09_17650;Name=C9F09_17650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17650;pseudo=true PYKB01001050.1 Protein Homology CDS 1069 1203 . + 0 ID=cds-C9F09_17650;Parent=gene-C9F09_17650;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456927.1;locus_tag=C9F09_17650;product=endonuclease SmrB;pseudo=true;transl_table=11 ##sequence-region PYKB01000573.1 1 1303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000573.1 Genbank region 1 1303 . + . ID=PYKB01000573.1:1..1303;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000573.1 Genbank gene 135 1205 . + . ID=gene-C9F09_08115;Name=C9F09_08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08115 PYKB01000573.1 Protein Homology CDS 135 1205 . + 0 ID=cds-TGC95962.1;Parent=gene-C9F09_08115;Dbxref=NCBI_GP:TGC95962.1;Name=TGC95962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=C9F09_08115;product=hypothetical protein;protein_id=TGC95962.1;transl_table=11 PYKB01000573.1 Genbank pseudogene 1178 1285 . + . ID=gene-C9F09_08120;Name=C9F09_08120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08120;pseudo=true PYKB01000573.1 Protein Homology CDS 1178 1285 . + 0 ID=cds-C9F09_08120;Parent=gene-C9F09_08120;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=C9F09_08120;product=DUF2491 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001014.1 1 1299 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001014.1 Genbank region 1 1299 . + . ID=PYKB01001014.1:1..1299;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001014.1 Genbank gene 1 720 . + . ID=gene-C9F09_16960;Name=C9F09_16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16960;partial=true;start_range=.,1 PYKB01001014.1 Protein Homology CDS 1 720 . + 0 ID=cds-TGC87922.1;Parent=gene-C9F09_16960;Dbxref=NCBI_GP:TGC87922.1;Name=TGC87922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782140.1;locus_tag=C9F09_16960;partial=true;product=aldo/keto reductase;protein_id=TGC87922.1;start_range=.,1;transl_table=11 PYKB01001014.1 Genbank gene 850 1299 . + . ID=gene-C9F09_16965;Name=C9F09_16965;end_range=1299,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16965;partial=true PYKB01001014.1 Protein Homology CDS 850 1299 . + 0 ID=cds-TGC87923.1;Parent=gene-C9F09_16965;Dbxref=NCBI_GP:TGC87923.1;Name=TGC87923.1;end_range=1299,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310506.1;locus_tag=C9F09_16965;partial=true;product=DeoR/GlpR transcriptional regulator;protein_id=TGC87923.1;transl_table=11 ##sequence-region PYKB01000757.1 1 1298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000757.1 Genbank region 1 1298 . + . ID=PYKB01000757.1:1..1298;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000757.1 Genbank gene 1 881 . - . ID=gene-C9F09_11695;Name=C9F09_11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11695;partial=true;start_range=.,1 PYKB01000757.1 Protein Homology CDS 1 881 . - 0 ID=cds-TGC92833.1;Parent=gene-C9F09_11695;Dbxref=NCBI_GP:TGC92833.1;Name=TGC92833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=C9F09_11695;partial=true;product=GMP synthase (glutamine-hydrolyzing);protein_id=TGC92833.1;start_range=.,1;transl_table=11 PYKB01000757.1 Genbank gene 951 1298 . - . ID=gene-C9F09_11700;Name=C9F09_11700;end_range=1298,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11700;partial=true PYKB01000757.1 Protein Homology CDS 951 1298 . - 0 ID=cds-TGC92834.1;Parent=gene-C9F09_11700;Dbxref=NCBI_GP:TGC92834.1;Name=TGC92834.1;end_range=1298,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457045.1;locus_tag=C9F09_11700;partial=true;product=hypothetical protein;protein_id=TGC92834.1;transl_table=11 ##sequence-region PYKB01000007.1 1 7730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000007.1 Genbank region 1 7730 . + . ID=PYKB01000007.1:1..7730;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000007.1 Genbank gene 1 1022 . - . ID=gene-C9F09_00045;Name=C9F09_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00045;partial=true;start_range=.,1 PYKB01000007.1 Protein Homology CDS 1 1022 . - 0 ID=cds-TGD07281.1;Parent=gene-C9F09_00045;Dbxref=NCBI_GP:TGD07281.1;Name=TGD07281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=C9F09_00045;partial=true;product=murein DD-endopeptidase MepM;protein_id=TGD07281.1;start_range=.,1;transl_table=11 PYKB01000007.1 Genbank gene 1038 1997 . - . ID=gene-C9F09_00050;Name=C9F09_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00050 PYKB01000007.1 Protein Homology CDS 1038 1997 . - 0 ID=cds-TGD07287.1;Parent=gene-C9F09_00050;Dbxref=NCBI_GP:TGD07287.1;Name=TGD07287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456458.3;locus_tag=C9F09_00050;product=zinc ABC transporter substrate-binding protein;protein_id=TGD07287.1;transl_table=11 PYKB01000007.1 Genbank gene 2061 2816 . + . ID=gene-C9F09_00055;Name=C9F09_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00055 PYKB01000007.1 Protein Homology CDS 2061 2816 . + 0 ID=cds-TGD07282.1;Parent=gene-C9F09_00055;Dbxref=NCBI_GP:TGD07282.1;Name=TGD07282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456459.1;locus_tag=C9F09_00055;product=Mn2+/Zn2+ABC transporter ATP-binding protein;protein_id=TGD07282.1;transl_table=11 PYKB01000007.1 Genbank gene 2813 3598 . + . ID=gene-C9F09_00060;Name=C9F09_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00060 PYKB01000007.1 Protein Homology CDS 2813 3598 . + 0 ID=cds-TGD07283.1;Parent=gene-C9F09_00060;Dbxref=NCBI_GP:TGD07283.1;Name=TGD07283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=C9F09_00060;product=zinc ABC transporter permease subunit ZnuB;protein_id=TGD07283.1;transl_table=11 PYKB01000007.1 Genbank gene 3677 4687 . - . ID=gene-C9F09_00065;Name=C9F09_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00065 PYKB01000007.1 Protein Homology CDS 3677 4687 . - 0 ID=cds-TGD07284.1;Parent=gene-C9F09_00065;Dbxref=NCBI_GP:TGD07284.1;Name=TGD07284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441950.1;locus_tag=C9F09_00065;product=Holliday junction branch migration DNA helicase RuvB;protein_id=TGD07284.1;transl_table=11 PYKB01000007.1 Genbank gene 4696 5307 . - . ID=gene-C9F09_00070;Name=C9F09_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00070 PYKB01000007.1 Protein Homology CDS 4696 5307 . - 0 ID=cds-TGD07285.1;Parent=gene-C9F09_00070;Dbxref=NCBI_GP:TGD07285.1;Name=TGD07285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456462.1;locus_tag=C9F09_00070;product=Holliday junction branch migration protein RuvA;protein_id=TGD07285.1;transl_table=11 PYKB01000007.1 Genbank gene 5667 6341 . - . ID=gene-C9F09_00075;Name=C9F09_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00075 PYKB01000007.1 Protein Homology CDS 5667 6341 . - 0 ID=cds-TGD07288.1;Parent=gene-C9F09_00075;Dbxref=NCBI_GP:TGD07288.1;Name=TGD07288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456463.1;locus_tag=C9F09_00075;product=hypothetical protein;protein_id=TGD07288.1;transl_table=11 PYKB01000007.1 Genbank gene 6569 7165 . + . ID=gene-C9F09_00080;Name=C9F09_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00080 PYKB01000007.1 Protein Homology CDS 6569 7165 . + 0 ID=cds-TGD07286.1;Parent=gene-C9F09_00080;Dbxref=NCBI_GP:TGD07286.1;Name=TGD07286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716751.1;locus_tag=C9F09_00080;product=hypothetical protein;protein_id=TGD07286.1;transl_table=11 PYKB01000007.1 Genbank gene 7265 7730 . - . ID=gene-C9F09_00085;Name=C9F09_00085;end_range=7730,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00085;partial=true PYKB01000007.1 Protein Homology CDS 7265 7730 . - 1 ID=cds-TGD07289.1;Parent=gene-C9F09_00085;Dbxref=NCBI_GP:TGD07289.1;Name=TGD07289.1;end_range=7730,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974705.1;locus_tag=C9F09_00085;partial=true;product=phosphate ABC transporter substrate-binding protein;protein_id=TGD07289.1;transl_table=11 ##sequence-region PYKB01000508.1 1 1295 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000508.1 Genbank region 1 1295 . + . ID=PYKB01000508.1:1..1295;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000508.1 Genbank pseudogene 52 357 . - . ID=gene-C9F09_06570;Name=C9F09_06570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_06570;pseudo=true PYKB01000508.1 Protein Homology CDS 52 357 . - 0 ID=cds-C9F09_06570;Parent=gene-C9F09_06570;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=C9F09_06570;product=adenine phosphoribosyltransferase;pseudo=true;transl_table=11 PYKB01000508.1 Genbank gene 425 532 . - . ID=gene-C9F09_06575;Name=C9F09_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06575 PYKB01000508.1 Protein Homology CDS 425 532 . - 0 ID=cds-TGC97413.1;Parent=gene-C9F09_06575;Dbxref=NCBI_GP:TGC97413.1;Name=TGC97413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805029.1;locus_tag=C9F09_06575;product=adenine phosphoribosyltransferase;protein_id=TGC97413.1;transl_table=11 PYKB01000508.1 Genbank gene 510 887 . - . ID=gene-C9F09_06580;Name=C9F09_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06580 PYKB01000508.1 Protein Homology CDS 510 887 . - 0 ID=cds-TGC97414.1;Parent=gene-C9F09_06580;Dbxref=NCBI_GP:TGC97414.1;Name=TGC97414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455078.1;locus_tag=C9F09_06580;product=DUF454 domain-containing protein;protein_id=TGC97414.1;transl_table=11 PYKB01000508.1 Genbank gene 968 1295 . + . ID=gene-C9F09_06585;Name=C9F09_06585;end_range=1295,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06585;partial=true PYKB01000508.1 Protein Homology CDS 968 1295 . + 0 ID=cds-TGC97415.1;Parent=gene-C9F09_06585;Dbxref=NCBI_GP:TGC97415.1;Name=TGC97415.1;end_range=1295,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459476.1;locus_tag=C9F09_06585;partial=true;product=hypothetical protein;protein_id=TGC97415.1;transl_table=11 ##sequence-region PYKB01000246.1 1 1295 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000246.1 Genbank region 1 1295 . + . ID=PYKB01000246.1:1..1295;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000246.1 Genbank gene 1 442 . + . ID=gene-C9F09_02700;Name=C9F09_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02700;partial=true;start_range=.,1 PYKB01000246.1 Protein Homology CDS 1 442 . + 1 ID=cds-TGD02617.1;Parent=gene-C9F09_02700;Dbxref=NCBI_GP:TGD02617.1;Name=TGD02617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455107.1;locus_tag=C9F09_02700;partial=true;product=methionine ABC transporter permease;protein_id=TGD02617.1;start_range=.,1;transl_table=11 PYKB01000246.1 Genbank gene 471 1295 . - . ID=gene-C9F09_02705;Name=C9F09_02705;end_range=1295,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02705;partial=true PYKB01000246.1 Protein Homology CDS 471 1295 . - 0 ID=cds-TGD02618.1;Parent=gene-C9F09_02705;Dbxref=NCBI_GP:TGD02618.1;Name=TGD02618.1;end_range=1295,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=C9F09_02705;partial=true;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=TGD02618.1;transl_table=11 ##sequence-region PYKB01000021.1 1 1295 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000021.1 Genbank region 1 1295 . + . ID=PYKB01000021.1:1..1295;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000021.1 Genbank gene 1 148 . - . ID=gene-C9F09_00230;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=C9F09_00230;partial=true;start_range=.,1 PYKB01000021.1 Protein Homology CDS 1 148 . - 0 ID=cds-TGD06997.1;Parent=gene-C9F09_00230;Dbxref=NCBI_GP:TGD06997.1;Name=TGD06997.1;Note=catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway;gbkey=CDS;gene=ubiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458532.1;locus_tag=C9F09_00230;partial=true;product=4-hydroxybenzoate octaprenyltransferase;protein_id=TGD06997.1;start_range=.,1;transl_table=11 PYKB01000021.1 Genbank gene 162 659 . - . ID=gene-C9F09_00235;Name=C9F09_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00235 PYKB01000021.1 Protein Homology CDS 162 659 . - 0 ID=cds-TGD06998.1;Parent=gene-C9F09_00235;Dbxref=NCBI_GP:TGD06998.1;Name=TGD06998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=C9F09_00235;product=chorismate lyase;protein_id=TGD06998.1;transl_table=11 PYKB01000021.1 Genbank gene 840 1295 . - . ID=gene-C9F09_00240;Name=C9F09_00240;end_range=1295,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00240;partial=true PYKB01000021.1 Protein Homology CDS 840 1295 . - 0 ID=cds-TGD06999.1;Parent=gene-C9F09_00240;Dbxref=NCBI_GP:TGD06999.1;Name=TGD06999.1;end_range=1295,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458530.1;locus_tag=C9F09_00240;partial=true;product=maltose operon protein MalM;protein_id=TGD06999.1;transl_table=11 ##sequence-region PYKB01000762.1 1 1291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000762.1 Genbank region 1 1291 . + . ID=PYKB01000762.1:1..1291;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000762.1 Genbank gene 1 239 . - . ID=gene-C9F09_11795;Name=C9F09_11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11795;partial=true;start_range=.,1 PYKB01000762.1 Protein Homology CDS 1 239 . - 0 ID=cds-TGC92704.1;Parent=gene-C9F09_11795;Dbxref=NCBI_GP:TGC92704.1;Name=TGC92704.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=C9F09_11795;partial=true;product=septum formation inhibitor Maf;protein_id=TGC92704.1;start_range=.,1;transl_table=11 PYKB01000762.1 Genbank gene 248 739 . - . ID=gene-C9F09_11800;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=C9F09_11800 PYKB01000762.1 Protein Homology CDS 248 739 . - 0 ID=cds-TGC92705.1;Parent=gene-C9F09_11800;Dbxref=NCBI_GP:TGC92705.1;Name=TGC92705.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457748.1;locus_tag=C9F09_11800;product=rod shape-determining protein MreD;protein_id=TGC92705.1;transl_table=11 PYKB01000762.1 Genbank pseudogene 739 1245 . - . ID=gene-C9F09_11805;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=pseudogene;locus_tag=C9F09_11805;pseudo=true PYKB01000762.1 Protein Homology CDS 739 1245 . - 0 ID=cds-C9F09_11805;Parent=gene-C9F09_11805;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=mreC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=C9F09_11805;product=rod shape-determining protein MreC;pseudo=true;transl_table=11 ##sequence-region PYKB01001724.1 1 1290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001724.1 Genbank region 1 1290 . + . ID=PYKB01001724.1:1..1290;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001724.1 Genbank gene 1 304 . + . ID=gene-C9F09_30210;Name=C9F09_30210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30210;partial=true;start_range=.,1 PYKB01001724.1 Protein Homology CDS 1 304 . + 1 ID=cds-TGC71323.1;Parent=gene-C9F09_30210;Dbxref=NCBI_GP:TGC71323.1;Name=TGC71323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457980.1;locus_tag=C9F09_30210;partial=true;product=autoinducer-2 kinase;protein_id=TGC71323.1;start_range=.,1;transl_table=11 PYKB01001724.1 Genbank gene 318 668 . + . ID=gene-C9F09_30215;Name=C9F09_30215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30215 PYKB01001724.1 Protein Homology CDS 318 668 . + 0 ID=cds-TGC71324.1;Parent=gene-C9F09_30215;Dbxref=NCBI_GP:TGC71324.1;Name=TGC71324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=C9F09_30215;product=cupin domain-containing protein;protein_id=TGC71324.1;transl_table=11 PYKB01001724.1 Genbank gene 758 889 . - . ID=gene-C9F09_30220;Name=C9F09_30220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30220 PYKB01001724.1 Protein Homology CDS 758 889 . - 0 ID=cds-TGC71325.1;Parent=gene-C9F09_30220;Dbxref=NCBI_GP:TGC71325.1;Name=TGC71325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462951.1;locus_tag=C9F09_30220;product=CDP-diacylglycerol pyrophosphatase;protein_id=TGC71325.1;transl_table=11 PYKB01001724.1 Genbank gene 905 1075 . - . ID=gene-C9F09_30225;Name=C9F09_30225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30225 PYKB01001724.1 Protein Homology CDS 905 1075 . - 0 ID=cds-TGC71326.1;Parent=gene-C9F09_30225;Dbxref=NCBI_GP:TGC71326.1;Name=TGC71326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000061017.1;locus_tag=C9F09_30225;product=hypothetical protein;protein_id=TGC71326.1;transl_table=11 PYKB01001724.1 Genbank gene 1173 1290 . - . ID=gene-C9F09_30230;Name=C9F09_30230;end_range=1290,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30230;partial=true PYKB01001724.1 Protein Homology CDS 1173 1290 . - 1 ID=cds-TGC71327.1;Parent=gene-C9F09_30230;Dbxref=NCBI_GP:TGC71327.1;Name=TGC71327.1;end_range=1290,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457982.1;locus_tag=C9F09_30230;partial=true;product=GntR family transcriptional regulator;protein_id=TGC71327.1;transl_table=11 ##sequence-region PYKB01000945.1 1 1289 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000945.1 Genbank region 1 1289 . + . ID=PYKB01000945.1:1..1289;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000945.1 Genbank gene 1 865 . + . ID=gene-C9F09_15595;Name=C9F09_15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15595;partial=true;start_range=.,1 PYKB01000945.1 Protein Homology CDS 1 865 . + 1 ID=cds-TGC89395.1;Parent=gene-C9F09_15595;Dbxref=NCBI_GP:TGC89395.1;Name=TGC89395.1;Note=quinoprotein glucose dehydrogenase%3B catalyzes the formation of D-glucono-1%2C5-lactone from D-glucose and ubiquinone;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=C9F09_15595;partial=true;product=membrane-bound PQQ-dependent dehydrogenase%2C glucose/quinate/shikimate family;protein_id=TGC89395.1;start_range=.,1;transl_table=11 PYKB01000945.1 Genbank gene 957 1289 . - . ID=gene-C9F09_15600;Name=C9F09_15600;end_range=1289,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15600;partial=true PYKB01000945.1 Protein Homology CDS 957 1289 . - 0 ID=cds-TGC89396.1;Parent=gene-C9F09_15600;Dbxref=NCBI_GP:TGC89396.1;Name=TGC89396.1;end_range=1289,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454781.1;locus_tag=C9F09_15600;partial=true;product=hypothetical protein;protein_id=TGC89396.1;transl_table=11 ##sequence-region PYKB01001402.1 1 1216 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001402.1 Genbank region 1 1216 . + . ID=PYKB01001402.1:1..1216;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001402.1 Genbank gene 1 550 . - . ID=gene-C9F09_24100;Name=C9F09_24100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24100;partial=true;start_range=.,1 PYKB01001402.1 Protein Homology CDS 1 550 . - 0 ID=cds-TGC79418.1;Parent=gene-C9F09_24100;Dbxref=NCBI_GP:TGC79418.1;Name=TGC79418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=C9F09_24100;partial=true;product=type II asparaginase;protein_id=TGC79418.1;start_range=.,1;transl_table=11 PYKB01001402.1 Genbank gene 609 1216 . - . ID=gene-C9F09_24105;Name=C9F09_24105;end_range=1216,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24105;partial=true PYKB01001402.1 Protein Homology CDS 609 1216 . - 2 ID=cds-TGC79419.1;Parent=gene-C9F09_24105;Dbxref=NCBI_GP:TGC79419.1;Name=TGC79419.1;end_range=1216,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=C9F09_24105;partial=true;product=C4-dicarboxylate ABC transporter;protein_id=TGC79419.1;transl_table=11 ##sequence-region PYKB01000284.1 1 1286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000284.1 Genbank region 1 1286 . + . ID=PYKB01000284.1:1..1286;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000284.1 Genbank gene 1 1286 . + . ID=gene-C9F09_03255;Name=C9F09_03255;end_range=1286,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03255;partial=true;start_range=.,1 PYKB01000284.1 Protein Homology CDS 1 1286 . + 2 ID=cds-TGD01693.1;Parent=gene-C9F09_03255;Dbxref=NCBI_GP:TGD01693.1;Name=TGD01693.1;end_range=1286,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=C9F09_03255;partial=true;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=TGD01693.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001271.1 1 1285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001271.1 Genbank region 1 1285 . + . ID=PYKB01001271.1:1..1285;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001271.1 Genbank pseudogene 1 1219 . + . ID=gene-C9F09_21730;Name=C9F09_21730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21730;pseudo=true PYKB01001271.1 Protein Homology CDS 1 1219 . + 1 ID=cds-C9F09_21730;Parent=gene-C9F09_21730;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462432.1;locus_tag=C9F09_21730;product=dihydroxy-acid dehydratase;pseudo=true;transl_table=11 ##sequence-region PYKB01000909.1 1 1285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000909.1 Genbank region 1 1285 . + . ID=PYKB01000909.1:1..1285;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000909.1 Genbank pseudogene 87 995 . - . ID=gene-C9F09_14940;Name=C9F09_14940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_14940;pseudo=true PYKB01000909.1 Protein Homology CDS 87 995 . - 0 ID=cds-C9F09_14940;Parent=gene-C9F09_14940;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003905541.1;locus_tag=C9F09_14940;product=phosphoglucosamine mutase;pseudo=true;transl_table=11 PYKB01000909.1 Genbank gene 988 1285 . - . ID=gene-C9F09_14945;Name=folP;end_range=1285,.;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=C9F09_14945;partial=true PYKB01000909.1 Protein Homology CDS 988 1285 . - 1 ID=cds-TGC90000.1;Parent=gene-C9F09_14945;Dbxref=NCBI_GP:TGC90000.1;Name=TGC90000.1;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;end_range=1285,.;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457674.1;locus_tag=C9F09_14945;partial=true;product=dihydropteroate synthase;protein_id=TGC90000.1;transl_table=11 ##sequence-region PYKB01001381.1 1 7702 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001381.1 Genbank region 1 7702 . + . ID=PYKB01001381.1:1..7702;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001381.1 Genbank pseudogene 1 524 . + . ID=gene-C9F09_23815;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=pseudogene;locus_tag=C9F09_23815;pseudo=true PYKB01001381.1 Protein Homology CDS 1 524 . + 2 ID=cds-C9F09_23815;Parent=gene-C9F09_23815;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=C9F09_23815;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;pseudo=true;transl_table=11 PYKB01001381.1 Genbank gene 624 1769 . + . ID=gene-C9F09_23820;Name=C9F09_23820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23820 PYKB01001381.1 Protein Homology CDS 624 1769 . + 0 ID=cds-TGC79851.1;Parent=gene-C9F09_23820;Dbxref=NCBI_GP:TGC79851.1;Name=TGC79851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458213.1;locus_tag=C9F09_23820;product=UDP-glucose--(glucosyl)LPS alpha-1%2C2-glucosyltransferase;protein_id=TGC79851.1;transl_table=11 PYKB01001381.1 Genbank gene 1827 3041 . - . ID=gene-C9F09_23825;Name=C9F09_23825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23825 PYKB01001381.1 Protein Homology CDS 1827 3041 . - 0 ID=cds-TGC79852.1;Parent=gene-C9F09_23825;Dbxref=NCBI_GP:TGC79852.1;Name=TGC79852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=C9F09_23825;product=O-antigen ligase RfaL;protein_id=TGC79852.1;transl_table=11 PYKB01001381.1 Genbank gene 3081 4034 . - . ID=gene-C9F09_23830;Name=C9F09_23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23830 PYKB01001381.1 Protein Homology CDS 3081 4034 . - 0 ID=cds-TGC79853.1;Parent=gene-C9F09_23830;Dbxref=NCBI_GP:TGC79853.1;Name=TGC79853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458215.1;locus_tag=C9F09_23830;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=TGC79853.1;transl_table=11 PYKB01001381.1 Genbank gene 4034 5080 . - . ID=gene-C9F09_23835;Name=C9F09_23835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23835 PYKB01001381.1 Protein Homology CDS 4034 5080 . - 0 ID=cds-TGC79854.1;Parent=gene-C9F09_23835;Dbxref=NCBI_GP:TGC79854.1;Name=TGC79854.1;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=C9F09_23835;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=TGC79854.1;transl_table=11 PYKB01001381.1 Genbank gene 5083 6015 . - . ID=gene-C9F09_23840;Name=C9F09_23840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23840 PYKB01001381.1 Protein Homology CDS 5083 6015 . - 0 ID=cds-TGC79855.1;Parent=gene-C9F09_23840;Dbxref=NCBI_GP:TGC79855.1;Name=TGC79855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=C9F09_23840;product=ADP-L-glycero-D-mannoheptose-6-epimerase;protein_id=TGC79855.1;transl_table=11 PYKB01001381.1 Genbank gene 6218 7414 . + . ID=gene-C9F09_23845;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=C9F09_23845 PYKB01001381.1 Protein Homology CDS 6218 7414 . + 0 ID=cds-TGC79856.1;Parent=gene-C9F09_23845;Dbxref=NCBI_GP:TGC79856.1;Name=TGC79856.1;gbkey=CDS;gene=kbl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=C9F09_23845;product=glycine C-acetyltransferase;protein_id=TGC79856.1;transl_table=11 PYKB01001381.1 Genbank gene 7424 7702 . + . ID=gene-C9F09_23850;Name=tdh;end_range=7702,.;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=C9F09_23850;partial=true PYKB01001381.1 Protein Homology CDS 7424 7702 . + 0 ID=cds-TGC79857.1;Parent=gene-C9F09_23850;Dbxref=NCBI_GP:TGC79857.1;Name=TGC79857.1;Note=converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism;end_range=7702,.;gbkey=CDS;gene=tdh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=C9F09_23850;partial=true;product=L-threonine 3-dehydrogenase;protein_id=TGC79857.1;transl_table=11 ##sequence-region PYKB01001372.1 1 1281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001372.1 Genbank region 1 1281 . + . ID=PYKB01001372.1:1..1281;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001372.1 Genbank gene 38 1281 . + . ID=gene-C9F09_23595;Name=thrA;end_range=1281,.;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=C9F09_23595;partial=true PYKB01001372.1 Protein Homology CDS 38 1281 . + 0 ID=cds-TGC80085.1;Parent=gene-C9F09_23595;Dbxref=NCBI_GP:TGC80085.1;Name=TGC80085.1;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;end_range=1281,.;gbkey=CDS;gene=thrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005032774.1;locus_tag=C9F09_23595;partial=true;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=TGC80085.1;transl_table=11 ##sequence-region PYKB01001290.1 1 1279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001290.1 Genbank region 1 1279 . + . ID=PYKB01001290.1:1..1279;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001290.1 Genbank pseudogene 76 1279 . + . ID=gene-C9F09_22050;Name=C9F09_22050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22050;pseudo=true PYKB01001290.1 Protein Homology CDS 76 1279 . + 0 ID=cds-C9F09_22050;Parent=gene-C9F09_22050;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005021211.1;locus_tag=C9F09_22050;product=permease;pseudo=true;transl_table=11 ##sequence-region PYKB01001417.1 1 1278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001417.1 Genbank region 1 1278 . + . ID=PYKB01001417.1:1..1278;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001417.1 Genbank pseudogene 41 211 . + . ID=gene-C9F09_24380;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=pseudogene;locus_tag=C9F09_24380;pseudo=true PYKB01001417.1 Protein Homology CDS 41 211 . + 0 ID=cds-C9F09_24380;Parent=gene-C9F09_24380;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455699.1;locus_tag=C9F09_24380;product=penicillin-binding protein activator LpoB;pseudo=true;transl_table=11 PYKB01001417.1 Genbank gene 192 1016 . + . ID=gene-C9F09_24385;Name=C9F09_24385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24385 PYKB01001417.1 Protein Homology CDS 192 1016 . + 0 ID=cds-TGC79093.1;Parent=gene-C9F09_24385;Dbxref=NCBI_GP:TGC79093.1;Name=TGC79093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455700.1;locus_tag=C9F09_24385;product=thiamine kinase;protein_id=TGC79093.1;transl_table=11 PYKB01001417.1 Genbank gene 1027 1278 . + . ID=gene-C9F09_24390;Name=C9F09_24390;end_range=1278,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24390;partial=true PYKB01001417.1 Protein Homology CDS 1027 1278 . + 0 ID=cds-TGC79094.1;Parent=gene-C9F09_24390;Dbxref=NCBI_GP:TGC79094.1;Name=TGC79094.1;Note=hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides;end_range=1278,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455701.1;locus_tag=C9F09_24390;partial=true;product=beta-N-acetylhexosaminidase;protein_id=TGC79094.1;transl_table=11 ##sequence-region PYKB01000617.1 1 1265 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000617.1 Genbank region 1 1265 . + . ID=PYKB01000617.1:1..1265;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000617.1 Genbank gene 1 277 . - . ID=gene-C9F09_09145;Name=C9F09_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09145;partial=true;start_range=.,1 PYKB01000617.1 Protein Homology CDS 1 277 . - 0 ID=cds-TGC95009.1;Parent=gene-C9F09_09145;Dbxref=NCBI_GP:TGC95009.1;Name=TGC95009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459917.1;locus_tag=C9F09_09145;partial=true;product=DUF535 domain-containing protein;protein_id=TGC95009.1;start_range=.,1;transl_table=11 PYKB01000617.1 Genbank pseudogene 405 1229 . + . ID=gene-C9F09_09150;Name=C9F09_09150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_09150;pseudo=true PYKB01000617.1 Protein Homology CDS 405 1229 . + 0 ID=cds-C9F09_09150;Parent=gene-C9F09_09150;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=C9F09_09150;product=macrolide transporter subunit MacA;pseudo=true;transl_table=11 ##sequence-region PYKB01000942.1 1 1259 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000942.1 Genbank region 1 1259 . + . ID=PYKB01000942.1:1..1259;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000942.1 Genbank gene 1 147 . - . ID=gene-C9F09_15560;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=C9F09_15560;partial=true;start_range=.,1 PYKB01000942.1 Protein Homology CDS 1 147 . - 0 ID=cds-TGC89452.1;Parent=gene-C9F09_15560;Dbxref=NCBI_GP:TGC89452.1;Name=TGC89452.1;Note=makes up the distal portion of the flagellar basal body rod;gbkey=CDS;gene=flgG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=C9F09_15560;partial=true;product=flagellar basal body rod protein FlgG;protein_id=TGC89452.1;start_range=.,1;transl_table=11 PYKB01000942.1 Genbank gene 161 916 . - . ID=gene-C9F09_15565;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=C9F09_15565 PYKB01000942.1 Protein Homology CDS 161 916 . - 0 ID=cds-TGC89453.1;Parent=gene-C9F09_15565;Dbxref=NCBI_GP:TGC89453.1;Name=TGC89453.1;Note=FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=C9F09_15565;product=flagellar basal body rod protein FlgF;protein_id=TGC89453.1;transl_table=11 PYKB01000942.1 Genbank gene 937 1259 . - . ID=gene-C9F09_15570;Name=flgE;end_range=1259,.;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=C9F09_15570;partial=true PYKB01000942.1 Protein Homology CDS 937 1259 . - 2 ID=cds-TGC89454.1;Parent=gene-C9F09_15570;Dbxref=NCBI_GP:TGC89454.1;Name=TGC89454.1;Note=the hook connects flagellar basal body to the flagellar filament;end_range=1259,.;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455670.1;locus_tag=C9F09_15570;partial=true;product=flagellar hook protein FlgE;protein_id=TGC89454.1;transl_table=11 ##sequence-region PYKB01000212.1 1 1253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000212.1 Genbank region 1 1253 . + . ID=PYKB01000212.1:1..1253;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000212.1 Genbank gene 115 1026 . + . ID=gene-C9F09_02290;Name=C9F09_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02290 PYKB01000212.1 Protein Homology CDS 115 1026 . + 0 ID=cds-TGD03457.1;Parent=gene-C9F09_02290;Dbxref=NCBI_GP:TGD03457.1;Name=TGD03457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=C9F09_02290;product=N-acetylglucosamine kinase;protein_id=TGD03457.1;transl_table=11 PYKB01000212.1 Genbank gene 1045 1253 . + . ID=gene-C9F09_02295;Name=C9F09_02295;end_range=1253,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02295;partial=true PYKB01000212.1 Protein Homology CDS 1045 1253 . + 0 ID=cds-TGD03458.1;Parent=gene-C9F09_02295;Dbxref=NCBI_GP:TGD03458.1;Name=TGD03458.1;Note=Modulates the activities of several enzymes which are inactive in their acetylated form;end_range=1253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=C9F09_02295;partial=true;product=NAD-dependent protein deacylase;protein_id=TGD03458.1;transl_table=11 ##sequence-region PYKB01000543.1 1 1252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000543.1 Genbank region 1 1252 . + . ID=PYKB01000543.1:1..1252;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000543.1 Genbank pseudogene 51 350 . - . ID=gene-C9F09_07395;Name=pagp;gbkey=Gene;gene=pagp;gene_biotype=pseudogene;locus_tag=C9F09_07395;pseudo=true PYKB01000543.1 Protein Homology CDS 51 350 . - 0 ID=cds-C9F09_07395;Parent=gene-C9F09_07395;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=pagp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455205.1;locus_tag=C9F09_07395;product=lipid IV(A) palmitoyltransferase PagP;pseudo=true;transl_table=11 PYKB01000543.1 Genbank pseudogene 466 668 . - . ID=gene-C9F09_07400;Name=C9F09_07400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07400;pseudo=true PYKB01000543.1 Protein Homology CDS 466 668 . - 0 ID=cds-C9F09_07400;Parent=gene-C9F09_07400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002948650.1;locus_tag=C9F09_07400;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000543.1 Genbank pseudogene 729 1166 . + . ID=gene-C9F09_07405;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=pseudogene;locus_tag=C9F09_07405;pseudo=true PYKB01000543.1 Protein Homology CDS 729 1166 . + 0 ID=cds-C9F09_07405;Parent=gene-C9F09_07405;Note=responsible for the transport of C4-dicarboxylates during anaerobic growth%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455204.1;locus_tag=C9F09_07405;product=anaerobic C4-dicarboxylate transporter DcuC;pseudo=true;transl_table=11 ##sequence-region PYKB01001704.1 1 1252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001704.1 Genbank region 1 1252 . + . ID=PYKB01001704.1:1..1252;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001704.1 Genbank gene 1 334 . - . ID=gene-C9F09_29800;Name=C9F09_29800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29800;partial=true;start_range=.,1 PYKB01001704.1 Protein Homology CDS 1 334 . - 0 ID=cds-TGC71842.1;Parent=gene-C9F09_29800;Dbxref=NCBI_GP:TGC71842.1;Name=TGC71842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458404.1;locus_tag=C9F09_29800;partial=true;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=TGC71842.1;start_range=.,1;transl_table=11 PYKB01001704.1 Genbank gene 714 1252 . + . ID=gene-C9F09_29805;Name=C9F09_29805;end_range=1252,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29805;partial=true PYKB01001704.1 Protein Homology CDS 714 1252 . + 0 ID=cds-TGC71843.1;Parent=gene-C9F09_29805;Dbxref=NCBI_GP:TGC71843.1;Name=TGC71843.1;end_range=1252,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458405.1;locus_tag=C9F09_29805;partial=true;product=DUF4153 domain-containing protein;protein_id=TGC71843.1;transl_table=11 ##sequence-region PYKB01001278.1 1 1251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001278.1 Genbank region 1 1251 . + . ID=PYKB01001278.1:1..1251;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001278.1 Genbank gene 1 841 . - . ID=gene-C9F09_21895;Name=C9F09_21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21895;partial=true;start_range=.,1 PYKB01001278.1 Protein Homology CDS 1 841 . - 0 ID=cds-TGC82018.1;Parent=gene-C9F09_21895;Dbxref=NCBI_GP:TGC82018.1;Name=TGC82018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=C9F09_21895;partial=true;product=methyl-accepting chemotaxis protein;protein_id=TGC82018.1;start_range=.,1;transl_table=11 PYKB01001278.1 Genbank gene 840 1055 . + . ID=gene-C9F09_21900;Name=C9F09_21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21900 PYKB01001278.1 Protein Homology CDS 840 1055 . + 0 ID=cds-TGC82019.1;Parent=gene-C9F09_21900;Dbxref=NCBI_GP:TGC82019.1;Name=TGC82019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012513013.1;locus_tag=C9F09_21900;product=hypothetical protein;protein_id=TGC82019.1;transl_table=11 PYKB01001278.1 Genbank gene 1010 1177 . - . ID=gene-C9F09_21905;Name=C9F09_21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21905 PYKB01001278.1 Protein Homology CDS 1010 1177 . - 0 ID=cds-TGC82020.1;Parent=gene-C9F09_21905;Dbxref=NCBI_GP:TGC82020.1;Name=TGC82020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=C9F09_21905;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=TGC82020.1;transl_table=11 ##sequence-region PYKB01000496.1 1 1251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000496.1 Genbank region 1 1251 . + . ID=PYKB01000496.1:1..1251;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000496.1 Genbank gene 1 532 . + . ID=gene-C9F09_06325;Name=C9F09_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06325;partial=true;start_range=.,1 PYKB01000496.1 Protein Homology CDS 1 532 . + 1 ID=cds-TGC97760.1;Parent=gene-C9F09_06325;Dbxref=NCBI_GP:TGC97760.1;Name=TGC97760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=C9F09_06325;partial=true;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=TGC97760.1;start_range=.,1;transl_table=11 PYKB01000496.1 Genbank gene 607 1251 . - . ID=gene-C9F09_06330;Name=C9F09_06330;end_range=1251,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06330;partial=true PYKB01000496.1 Protein Homology CDS 607 1251 . - 0 ID=cds-TGC97761.1;Parent=gene-C9F09_06330;Dbxref=NCBI_GP:TGC97761.1;Name=TGC97761.1;end_range=1251,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=C9F09_06330;partial=true;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=TGC97761.1;transl_table=11 ##sequence-region PYKB01001242.1 1 7665 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001242.1 Genbank region 1 7665 . + . ID=PYKB01001242.1:1..7665;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001242.1 Genbank gene 1 636 . - . ID=gene-C9F09_21145;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;gene_synonym=ydgG;locus_tag=C9F09_21145;partial=true;start_range=.,1 PYKB01001242.1 Protein Homology CDS 1 636 . - 0 ID=cds-TGC82641.1;Parent=gene-C9F09_21145;Dbxref=NCBI_GP:TGC82641.1;Name=TGC82641.1;Note=transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes;gbkey=CDS;gene=tqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455999.1;locus_tag=C9F09_21145;partial=true;product=pheromone autoinducer 2 transporter;protein_id=TGC82641.1;start_range=.,1;transl_table=11 PYKB01001242.1 Genbank gene 772 942 . + . ID=gene-C9F09_21150;Name=C9F09_21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21150 PYKB01001242.1 Protein Homology CDS 772 942 . + 0 ID=cds-TGC82633.1;Parent=gene-C9F09_21150;Dbxref=NCBI_GP:TGC82633.1;Name=TGC82633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991983.1;locus_tag=C9F09_21150;product=hypothetical protein;protein_id=TGC82633.1;transl_table=11 PYKB01001242.1 Genbank gene 1054 1416 . + . ID=gene-C9F09_21155;Name=C9F09_21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21155 PYKB01001242.1 Protein Homology CDS 1054 1416 . + 0 ID=cds-TGC82634.1;Parent=gene-C9F09_21155;Dbxref=NCBI_GP:TGC82634.1;Name=TGC82634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455998.1;locus_tag=C9F09_21155;product=multidrug transporter subunit MdtJ;protein_id=TGC82634.1;transl_table=11 PYKB01001242.1 Genbank gene 1403 1732 . + . ID=gene-C9F09_21160;Name=C9F09_21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21160 PYKB01001242.1 Protein Homology CDS 1403 1732 . + 0 ID=cds-TGC82635.1;Parent=gene-C9F09_21160;Dbxref=NCBI_GP:TGC82635.1;Name=TGC82635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455997.1;locus_tag=C9F09_21160;product=multidrug/spermidine transporter subunit MdtI;protein_id=TGC82635.1;transl_table=11 PYKB01001242.1 Genbank gene 1767 2588 . - . ID=gene-C9F09_21165;Name=C9F09_21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21165 PYKB01001242.1 Protein Homology CDS 1767 2588 . - 0 ID=cds-TGC82636.1;Parent=gene-C9F09_21165;Dbxref=NCBI_GP:TGC82636.1;Name=TGC82636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455996.1;locus_tag=C9F09_21165;product=serine protease;protein_id=TGC82636.1;transl_table=11 PYKB01001242.1 Genbank gene 2857 3141 . - . ID=gene-C9F09_21170;Name=C9F09_21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21170 PYKB01001242.1 Protein Homology CDS 2857 3141 . - 0 ID=cds-TGC82637.1;Parent=gene-C9F09_21170;Dbxref=NCBI_GP:TGC82637.1;Name=TGC82637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460445.3;locus_tag=C9F09_21170;product=acid shock protein;protein_id=TGC82637.1;transl_table=11 PYKB01001242.1 Genbank gene 3500 4753 . - . ID=gene-C9F09_21175;Name=C9F09_21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21175 PYKB01001242.1 Protein Homology CDS 3500 4753 . - 0 ID=cds-TGC82638.1;Parent=gene-C9F09_21175;Dbxref=NCBI_GP:TGC82638.1;Name=TGC82638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455993.1;locus_tag=C9F09_21175;product=MFS transporter;protein_id=TGC82638.1;transl_table=11 PYKB01001242.1 Genbank gene 4873 5772 . + . ID=gene-C9F09_21180;Name=C9F09_21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21180 PYKB01001242.1 Protein Homology CDS 4873 5772 . + 0 ID=cds-TGC82639.1;Parent=gene-C9F09_21180;Dbxref=NCBI_GP:TGC82639.1;Name=TGC82639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=C9F09_21180;product=LysR family transcriptional regulator;protein_id=TGC82639.1;transl_table=11 PYKB01001242.1 Genbank gene 5772 5972 . + . ID=gene-C9F09_21185;Name=C9F09_21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21185 PYKB01001242.1 Protein Homology CDS 5772 5972 . + 0 ID=cds-TGC82642.1;Parent=gene-C9F09_21185;Dbxref=NCBI_GP:TGC82642.1;Name=TGC82642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015953380.1;locus_tag=C9F09_21185;product=hypothetical protein;protein_id=TGC82642.1;transl_table=11 PYKB01001242.1 Genbank gene 5900 7120 . + . ID=gene-C9F09_21190;Name=C9F09_21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21190 PYKB01001242.1 Protein Homology CDS 5900 7120 . + 0 ID=cds-TGC82640.1;Parent=gene-C9F09_21190;Dbxref=NCBI_GP:TGC82640.1;Name=TGC82640.1;Note=mlc%2C controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems%2C regulates genes involved in the uptake of sugars;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=C9F09_21190;product=ROK family transcriptional regulator;protein_id=TGC82640.1;transl_table=11 PYKB01001242.1 Genbank pseudogene 7246 7587 . + . ID=gene-C9F09_21195;Name=C9F09_21195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21195;pseudo=true PYKB01001242.1 Protein Homology CDS 7246 7587 . + 0 ID=cds-C9F09_21195;Parent=gene-C9F09_21195;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=C9F09_21195;product=dethiobiotin synthase;pseudo=true;transl_table=11 ##sequence-region PYKB01000783.1 1 1248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000783.1 Genbank region 1 1248 . + . ID=PYKB01000783.1:1..1248;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000783.1 Genbank gene 1 354 . - . ID=gene-C9F09_12125;Name=C9F09_12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12125;partial=true;start_range=.,1 PYKB01000783.1 Protein Homology CDS 1 354 . - 0 ID=cds-TGC92455.1;Parent=gene-C9F09_12125;Dbxref=NCBI_GP:TGC92455.1;Name=TGC92455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280241.1;locus_tag=C9F09_12125;partial=true;product=DUF91 domain-containing protein;protein_id=TGC92455.1;start_range=.,1;transl_table=11 PYKB01000783.1 Genbank gene 490 1248 . + . ID=gene-C9F09_12130;Name=C9F09_12130;end_range=1248,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12130;partial=true PYKB01000783.1 Protein Homology CDS 490 1248 . + 0 ID=cds-TGC92456.1;Parent=gene-C9F09_12130;Dbxref=NCBI_GP:TGC92456.1;Name=TGC92456.1;end_range=1248,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102841.1;locus_tag=C9F09_12130;partial=true;product=hypothetical protein;protein_id=TGC92456.1;transl_table=11 ##sequence-region PYKB01000116.1 1 1242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000116.1 Genbank region 1 1242 . + . ID=PYKB01000116.1:1..1242;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000116.1 Genbank gene 1 153 . + . ID=gene-C9F09_01310;Name=C9F09_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01310;partial=true;start_range=.,1 PYKB01000116.1 Protein Homology CDS 1 153 . + 0 ID=cds-TGD05174.1;Parent=gene-C9F09_01310;Dbxref=NCBI_GP:TGD05174.1;Name=TGD05174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457651.1;locus_tag=C9F09_01310;partial=true;product=osmotically-inducible protein OsmY;protein_id=TGD05174.1;start_range=.,1;transl_table=11 PYKB01000116.1 Genbank gene 220 855 . - . ID=gene-C9F09_01315;Name=C9F09_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01315 PYKB01000116.1 Protein Homology CDS 220 855 . - 0 ID=cds-TGD05175.1;Parent=gene-C9F09_01315;Dbxref=NCBI_GP:TGD05175.1;Name=TGD05175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457652.1;locus_tag=C9F09_01315;product=hypothetical protein;protein_id=TGD05175.1;transl_table=11 PYKB01000116.1 Genbank gene 986 1242 . + . ID=gene-C9F09_01320;Name=C9F09_01320;end_range=1242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01320;partial=true PYKB01000116.1 Protein Homology CDS 986 1242 . + 0 ID=cds-TGD05176.1;Parent=gene-C9F09_01320;Dbxref=NCBI_GP:TGD05176.1;Name=TGD05176.1;end_range=1242,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417622.2;locus_tag=C9F09_01320;partial=true;product=protease;protein_id=TGD05176.1;transl_table=11 ##sequence-region PYKB01001241.1 1 1242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001241.1 Genbank region 1 1242 . + . ID=PYKB01001241.1:1..1242;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001241.1 Genbank gene 1 459 . + . ID=gene-C9F09_21135;Name=C9F09_21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21135;partial=true;start_range=.,1 PYKB01001241.1 Protein Homology CDS 1 459 . + 0 ID=cds-TGC82649.1;Parent=gene-C9F09_21135;Dbxref=NCBI_GP:TGC82649.1;Name=TGC82649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=C9F09_21135;partial=true;product=amino acid ABC transporter substrate-binding protein;protein_id=TGC82649.1;start_range=.,1;transl_table=11 PYKB01001241.1 Genbank gene 640 1242 . + . ID=gene-C9F09_21140;Name=C9F09_21140;end_range=1242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21140;partial=true PYKB01001241.1 Protein Homology CDS 640 1242 . + 0 ID=cds-TGC82650.1;Parent=gene-C9F09_21140;Dbxref=NCBI_GP:TGC82650.1;Name=TGC82650.1;Note=with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine;end_range=1242,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456895.1;locus_tag=C9F09_21140;partial=true;product=amino acid ABC transporter permease;protein_id=TGC82650.1;transl_table=11 ##sequence-region PYKB01001331.1 1 1240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001331.1 Genbank region 1 1240 . + . ID=PYKB01001331.1:1..1240;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001331.1 Genbank pseudogene 1 574 . - . ID=gene-C9F09_22840;Name=C9F09_22840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22840;pseudo=true PYKB01001331.1 Protein Homology CDS 1 574 . - 0 ID=cds-C9F09_22840;Parent=gene-C9F09_22840;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456825.1;locus_tag=C9F09_22840;product=glycerophosphodiester phosphodiesterase;pseudo=true;transl_table=11 PYKB01001331.1 Genbank gene 579 1240 . - . ID=gene-C9F09_22845;Name=glpT;end_range=1240,.;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=C9F09_22845;partial=true PYKB01001331.1 Protein Homology CDS 579 1240 . - 2 ID=cds-TGC80928.1;Parent=gene-C9F09_22845;Dbxref=NCBI_GP:TGC80928.1;Name=TGC80928.1;Note=catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell;end_range=1240,.;gbkey=CDS;gene=glpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=C9F09_22845;partial=true;product=glycerol-3-phosphate transporter;protein_id=TGC80928.1;transl_table=11 ##sequence-region PYKB01001651.1 1 1239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001651.1 Genbank region 1 1239 . + . ID=PYKB01001651.1:1..1239;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001651.1 Genbank gene 169 426 . - . ID=gene-C9F09_28805;Name=C9F09_28805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28805 PYKB01001651.1 Protein Homology CDS 169 426 . - 0 ID=cds-TGC73523.1;Parent=gene-C9F09_28805;Dbxref=NCBI_GP:TGC73523.1;Name=TGC73523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=C9F09_28805;product=phosphocarrier protein HPr;protein_id=TGC73523.1;transl_table=11 PYKB01001651.1 Genbank gene 810 1239 . - . ID=gene-C9F09_28810;Name=C9F09_28810;end_range=1239,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28810;partial=true PYKB01001651.1 Protein Homology CDS 810 1239 . - 1 ID=cds-TGC73524.1;Parent=gene-C9F09_28810;Dbxref=NCBI_GP:TGC73524.1;Name=TGC73524.1;end_range=1239,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=C9F09_28810;partial=true;product=cysteine synthase A;protein_id=TGC73524.1;transl_table=11 ##sequence-region PYKB01000766.1 1 1238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000766.1 Genbank region 1 1238 . + . ID=PYKB01000766.1:1..1238;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000766.1 Genbank gene 1 396 . + . ID=gene-C9F09_11875;Name=C9F09_11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11875;partial=true;start_range=.,1 PYKB01000766.1 Protein Homology CDS 1 396 . + 0 ID=cds-TGC92656.1;Parent=gene-C9F09_11875;Dbxref=NCBI_GP:TGC92656.1;Name=TGC92656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=C9F09_11875;partial=true;product=MFS transporter;protein_id=TGC92656.1;start_range=.,1;transl_table=11 PYKB01000766.1 Genbank gene 444 1238 . - . ID=gene-C9F09_11880;Name=C9F09_11880;end_range=1238,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11880;partial=true PYKB01000766.1 Protein Homology CDS 444 1238 . - 0 ID=cds-TGC92657.1;Parent=gene-C9F09_11880;Dbxref=NCBI_GP:TGC92657.1;Name=TGC92657.1;end_range=1238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=C9F09_11880;partial=true;product=protease HtpX;protein_id=TGC92657.1;transl_table=11 ##sequence-region PYKB01000463.1 1 1238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000463.1 Genbank region 1 1238 . + . ID=PYKB01000463.1:1..1238;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000463.1 Genbank pseudogene 76 228 . + . ID=gene-C9F09_05780;Name=C9F09_05780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05780;pseudo=true PYKB01000463.1 Protein Homology CDS 76 228 . + 0 ID=cds-C9F09_05780;Parent=gene-C9F09_05780;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454961.1;locus_tag=C9F09_05780;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000463.1 Genbank gene 364 1238 . - . ID=gene-C9F09_05785;Name=C9F09_05785;end_range=1238,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05785;partial=true PYKB01000463.1 Protein Homology CDS 364 1238 . - 2 ID=cds-TGC98414.1;Parent=gene-C9F09_05785;Dbxref=NCBI_GP:TGC98414.1;Name=TGC98414.1;Note=sigma-54 dependent activator family protein%3B activates the prpBCDE operon;end_range=1238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454962.1;locus_tag=C9F09_05785;partial=true;product=propionate catabolism operon regulatory protein PrpR;protein_id=TGC98414.1;transl_table=11 ##sequence-region PYKB01000941.1 1 1226 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000941.1 Genbank region 1 1226 . + . ID=PYKB01000941.1:1..1226;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000941.1 Genbank pseudogene 39 1172 . + . ID=gene-C9F09_15555;Name=C9F09_15555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15555;pseudo=true PYKB01000941.1 Protein Homology CDS 39 1172 . + 0 ID=cds-C9F09_15555;Parent=gene-C9F09_15555;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456727.1;locus_tag=C9F09_15555;product=D-lactate dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKB01001672.1 1 1225 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001672.1 Genbank region 1 1225 . + . ID=PYKB01001672.1:1..1225;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001672.1 Genbank gene 20 1006 . - . ID=gene-C9F09_29090;Name=C9F09_29090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29090 PYKB01001672.1 Protein Homology CDS 20 1006 . - 0 ID=cds-TGC73056.1;Parent=gene-C9F09_29090;Dbxref=NCBI_GP:TGC73056.1;Name=TGC73056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000337539.1;locus_tag=C9F09_29090;product=IS110 family transposase;protein_id=TGC73056.1;transl_table=11 ##sequence-region PYKB01001490.1 1 1225 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001490.1 Genbank region 1 1225 . + . ID=PYKB01001490.1:1..1225;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001490.1 Genbank gene 1 1225 . + . ID=gene-C9F09_25890;Name=C9F09_25890;end_range=1225,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25890;partial=true;start_range=.,1 PYKB01001490.1 Protein Homology CDS 1 1225 . + 1 ID=cds-TGC77483.1;Parent=gene-C9F09_25890;Dbxref=NCBI_GP:TGC77483.1;Name=TGC77483.1;end_range=1225,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454953.1;locus_tag=C9F09_25890;partial=true;product=site-specific DNA-methyltransferase;protein_id=TGC77483.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001275.1 1 7638 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001275.1 Genbank region 1 7638 . + . ID=PYKB01001275.1:1..7638;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001275.1 Genbank gene 1 317 . + . ID=gene-C9F09_21815;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=C9F09_21815;partial=true;start_range=.,1 PYKB01001275.1 Protein Homology CDS 1 317 . + 2 ID=cds-TGC82030.1;Parent=gene-C9F09_21815;Dbxref=NCBI_GP:TGC82030.1;Name=TGC82030.1;Note=catalyzes the formation of coproporphyrinogen from uroporphyrinogen III;gbkey=CDS;gene=hemE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137620.1;locus_tag=C9F09_21815;partial=true;product=uroporphyrinogen decarboxylase;protein_id=TGC82030.1;start_range=.,1;transl_table=11 PYKB01001275.1 Genbank gene 327 998 . + . ID=gene-C9F09_21820;Name=C9F09_21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21820 PYKB01001275.1 Protein Homology CDS 327 998 . + 0 ID=cds-TGC82031.1;Parent=gene-C9F09_21820;Dbxref=NCBI_GP:TGC82031.1;Name=TGC82031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457906.1;locus_tag=C9F09_21820;product=endonuclease V;protein_id=TGC82031.1;transl_table=11 PYKB01001275.1 Genbank gene 1040 1630 . + . ID=gene-C9F09_21825;Name=C9F09_21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21825 PYKB01001275.1 Protein Homology CDS 1040 1630 . + 0 ID=cds-TGC82032.1;Parent=gene-C9F09_21825;Dbxref=NCBI_GP:TGC82032.1;Name=TGC82032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457905.1;locus_tag=C9F09_21825;product=DUF416 domain-containing protein;protein_id=TGC82032.1;transl_table=11 PYKB01001275.1 Genbank gene 1817 2089 . + . ID=gene-C9F09_21830;Name=C9F09_21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21830 PYKB01001275.1 Protein Homology CDS 1817 2089 . + 0 ID=cds-TGC82033.1;Parent=gene-C9F09_21830;Dbxref=NCBI_GP:TGC82033.1;Name=TGC82033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=C9F09_21830;product=DNA-binding protein HU-alpha;protein_id=TGC82033.1;transl_table=11 PYKB01001275.1 Genbank gene 2101 2793 . + . ID=gene-C9F09_21835;Name=C9F09_21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21835 PYKB01001275.1 Protein Homology CDS 2101 2793 . + 0 ID=cds-TGC82034.1;Parent=gene-C9F09_21835;Dbxref=NCBI_GP:TGC82034.1;Name=TGC82034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457903.1;locus_tag=C9F09_21835;product=DUF1481 domain-containing protein;protein_id=TGC82034.1;transl_table=11 PYKB01001275.1 Genbank pseudogene 2838 3290 . - . ID=gene-C9F09_21840;Name=C9F09_21840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21840;pseudo=true PYKB01001275.1 Protein Homology CDS 2838 3290 . - 0 ID=cds-C9F09_21840;Parent=gene-C9F09_21840;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=C9F09_21840;product=zinc resistance-associated protein ZraP;pseudo=true;transl_table=11 PYKB01001275.1 Genbank gene 3544 4941 . + . ID=gene-C9F09_21845;Name=C9F09_21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21845 PYKB01001275.1 Protein Homology CDS 3544 4941 . + 0 ID=cds-TGC82035.1;Parent=gene-C9F09_21845;Dbxref=NCBI_GP:TGC82035.1;Name=TGC82035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=C9F09_21845;product=two-component system sensor histidine kinase ZraS;protein_id=TGC82035.1;transl_table=11 PYKB01001275.1 Genbank gene 4947 6272 . + . ID=gene-C9F09_21850;Name=C9F09_21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21850 PYKB01001275.1 Protein Homology CDS 4947 6272 . + 0 ID=cds-TGC82036.1;Parent=gene-C9F09_21850;Dbxref=NCBI_GP:TGC82036.1;Name=TGC82036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457900.1;locus_tag=C9F09_21850;product=two-component system response regulator ZraR;protein_id=TGC82036.1;transl_table=11 PYKB01001275.1 Genbank gene 6269 7558 . - . ID=gene-C9F09_21855;Name=C9F09_21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21855 PYKB01001275.1 Protein Homology CDS 6269 7558 . - 0 ID=cds-TGC82037.1;Parent=gene-C9F09_21855;Dbxref=NCBI_GP:TGC82037.1;Name=TGC82037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=C9F09_21855;product=phosphoribosylamine--glycine ligase;protein_id=TGC82037.1;transl_table=11 ##sequence-region PYKB01001642.1 1 1221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001642.1 Genbank region 1 1221 . + . ID=PYKB01001642.1:1..1221;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001642.1 Genbank gene 1 491 . + . ID=gene-C9F09_28705;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=C9F09_28705;partial=true;start_range=.,1 PYKB01001642.1 Protein Homology CDS 1 491 . + 2 ID=cds-TGC73722.1;Parent=gene-C9F09_28705;Dbxref=NCBI_GP:TGC73722.1;Name=TGC73722.1;gbkey=CDS;gene=phnU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459422.1;locus_tag=C9F09_28705;partial=true;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=TGC73722.1;start_range=.,1;transl_table=11 PYKB01001642.1 Genbank gene 494 1221 . + . ID=gene-C9F09_28710;Name=phnV;end_range=1221,.;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=C9F09_28710;partial=true PYKB01001642.1 Protein Homology CDS 494 1221 . + 0 ID=cds-TGC73723.1;Parent=gene-C9F09_28710;Dbxref=NCBI_GP:TGC73723.1;Name=TGC73723.1;end_range=1221,.;gbkey=CDS;gene=phnV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=C9F09_28710;partial=true;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=TGC73723.1;transl_table=11 ##sequence-region PYKB01000974.1 1 1219 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000974.1 Genbank region 1 1219 . + . ID=PYKB01000974.1:1..1219;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000974.1 Genbank gene 1 402 . - . ID=gene-C9F09_16135;Name=C9F09_16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16135;partial=true;start_range=.,1 PYKB01000974.1 Protein Homology CDS 1 402 . - 0 ID=cds-TGC88796.1;Parent=gene-C9F09_16135;Dbxref=NCBI_GP:TGC88796.1;Name=TGC88796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=C9F09_16135;partial=true;product=malto-oligosyltrehalose synthase;protein_id=TGC88796.1;start_range=.,1;transl_table=11 PYKB01000974.1 Genbank gene 399 1219 . - . ID=gene-C9F09_16140;Name=C9F09_16140;end_range=1219,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16140;partial=true PYKB01000974.1 Protein Homology CDS 399 1219 . - 2 ID=cds-TGC88797.1;Parent=gene-C9F09_16140;Dbxref=NCBI_GP:TGC88797.1;Name=TGC88797.1;end_range=1219,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455932.1;locus_tag=C9F09_16140;partial=true;product=malto-oligosyltrehalose trehalohydrolase;protein_id=TGC88797.1;transl_table=11 ##sequence-region PYKB01000651.1 1 1212 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000651.1 Genbank region 1 1212 . + . ID=PYKB01000651.1:1..1212;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000651.1 Genbank gene 1 539 . - . ID=gene-C9F09_09760;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=C9F09_09760;partial=true;start_range=.,1 PYKB01000651.1 Protein Homology CDS 1 539 . - 0 ID=cds-TGC94363.1;Parent=gene-C9F09_09760;Dbxref=NCBI_GP:TGC94363.1;Name=TGC94363.1;gbkey=CDS;gene=hemH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455085.1;locus_tag=C9F09_09760;partial=true;product=ferrochelatase;protein_id=TGC94363.1;start_range=.,1;transl_table=11 PYKB01000651.1 Genbank gene 768 1212 . - . ID=gene-C9F09_09765;Name=adk;end_range=1212,.;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=C9F09_09765;partial=true PYKB01000651.1 Protein Homology CDS 768 1212 . - 1 ID=cds-TGC94364.1;Parent=gene-C9F09_09765;Dbxref=NCBI_GP:TGC94364.1;Name=TGC94364.1;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;end_range=1212,.;gbkey=CDS;gene=adk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=C9F09_09765;partial=true;product=adenylate kinase;protein_id=TGC94364.1;transl_table=11 ##sequence-region PYKB01001011.1 1 1208 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001011.1 Genbank region 1 1208 . + . ID=PYKB01001011.1:1..1208;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001011.1 Genbank gene 1 761 . + . ID=gene-C9F09_16915;Name=C9F09_16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16915;partial=true;start_range=.,1 PYKB01001011.1 Protein Homology CDS 1 761 . + 2 ID=cds-TGC87954.1;Parent=gene-C9F09_16915;Dbxref=NCBI_GP:TGC87954.1;Name=TGC87954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461625.1;locus_tag=C9F09_16915;partial=true;product=phage tail tape measure protein;protein_id=TGC87954.1;start_range=.,1;transl_table=11 PYKB01001011.1 Genbank gene 758 1208 . + . ID=gene-C9F09_16920;Name=C9F09_16920;end_range=1208,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16920;partial=true PYKB01001011.1 Protein Homology CDS 758 1208 . + 0 ID=cds-TGC87955.1;Parent=gene-C9F09_16920;Dbxref=NCBI_GP:TGC87955.1;Name=TGC87955.1;end_range=1208,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461624.1;locus_tag=C9F09_16920;partial=true;product=phage tail protein;protein_id=TGC87955.1;transl_table=11 ##sequence-region PYKB01000832.1 1 1201 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000832.1 Genbank region 1 1201 . + . ID=PYKB01000832.1:1..1201;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000832.1 Genbank gene 1 1201 . - . ID=gene-C9F09_13125;Name=C9F09_13125;end_range=1201,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13125;partial=true;start_range=.,1 PYKB01000832.1 Protein Homology CDS 1 1201 . - 1 ID=cds-TGC91597.1;Parent=gene-C9F09_13125;Dbxref=NCBI_GP:TGC91597.1;Name=TGC91597.1;end_range=1201,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=C9F09_13125;partial=true;product=DNA translocase FtsK;protein_id=TGC91597.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000471.1 1 1198 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000471.1 Genbank region 1 1198 . + . ID=PYKB01000471.1:1..1198;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000471.1 Genbank gene 1 748 . - . ID=gene-C9F09_05900;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=C9F09_05900;partial=true;start_range=.,1 PYKB01000471.1 Protein Homology CDS 1 748 . - 0 ID=cds-TGC98268.1;Parent=gene-C9F09_05900;Dbxref=NCBI_GP:TGC98268.1;Name=TGC98268.1;Note=includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457769.1;locus_tag=C9F09_05900;partial=true;product=fatty acid oxidation complex subunit alpha FadB;protein_id=TGC98268.1;start_range=.,1;transl_table=11 PYKB01000471.1 Genbank gene 938 1198 . + . ID=gene-C9F09_05905;Name=C9F09_05905;end_range=1198,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05905;partial=true PYKB01000471.1 Protein Homology CDS 938 1198 . + 0 ID=cds-TGC98269.1;Parent=gene-C9F09_05905;Dbxref=NCBI_GP:TGC98269.1;Name=TGC98269.1;end_range=1198,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=C9F09_05905;partial=true;product=hypothetical protein;protein_id=TGC98269.1;transl_table=11 ##sequence-region PYKB01000661.1 1 1196 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000661.1 Genbank region 1 1196 . + . ID=PYKB01000661.1:1..1196;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000661.1 Genbank gene 1 934 . - . ID=gene-C9F09_09945;Name=C9F09_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09945;partial=true;start_range=.,1 PYKB01000661.1 Protein Homology CDS 1 934 . - 0 ID=cds-TGC94191.1;Parent=gene-C9F09_09945;Dbxref=NCBI_GP:TGC94191.1;Name=TGC94191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001115840.1;locus_tag=C9F09_09945;partial=true;product=hypothetical protein;protein_id=TGC94191.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000567.1 1 1195 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000567.1 Genbank region 1 1195 . + . ID=PYKB01000567.1:1..1195;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000567.1 Genbank gene 1 253 . + . ID=gene-C9F09_07995;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=C9F09_07995;partial=true;start_range=.,1 PYKB01000567.1 Protein Homology CDS 1 253 . + 1 ID=cds-TGC96096.1;Parent=gene-C9F09_07995;Dbxref=NCBI_GP:TGC96096.1;Name=TGC96096.1;Note=bifunctional 2%2C3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase%3B activates the carboxylate group of 2%2C3-dihydroxy-benzoate forming (2%2C3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2%2C3-dihydroxy-benzoate adenylate;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455172.1;locus_tag=C9F09_07995;partial=true;product=2%2C3-dihydroxybenzoate-AMP ligase;protein_id=TGC96096.1;start_range=.,1;transl_table=11 PYKB01000567.1 Genbank gene 267 1124 . + . ID=gene-C9F09_08000;Name=C9F09_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08000 PYKB01000567.1 Protein Homology CDS 267 1124 . + 0 ID=cds-TGC96097.1;Parent=gene-C9F09_08000;Dbxref=NCBI_GP:TGC96097.1;Name=TGC96097.1;Note=2%2C3 dihydro-2%2C3 dihydroxybenzoate synthase%3B catalyzes the formation of 2%2C3 dihydro-2%2C3 dihydroxybenzoate and pyruvate from isochorismate%3B with Ent DEF is involved in enterobactin synthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=C9F09_08000;product=isochorismatase;protein_id=TGC96097.1;transl_table=11 ##sequence-region PYKB01000884.1 1 1193 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000884.1 Genbank region 1 1193 . + . ID=PYKB01000884.1:1..1193;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000884.1 Genbank gene 1 104 . - . ID=gene-C9F09_14405;Name=C9F09_14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14405;partial=true;start_range=.,1 PYKB01000884.1 Protein Homology CDS 1 104 . - 0 ID=cds-TGC90545.1;Parent=gene-C9F09_14405;Dbxref=NCBI_GP:TGC90545.1;Name=TGC90545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457778.1;locus_tag=C9F09_14405;partial=true;product=twin-arginine translocase subunit TatA;protein_id=TGC90545.1;start_range=.,1;transl_table=11 PYKB01000884.1 Genbank pseudogene 310 630 . - . ID=gene-C9F09_14410;Name=C9F09_14410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_14410;pseudo=true PYKB01000884.1 Protein Homology CDS 310 630 . - 0 ID=cds-C9F09_14410;Parent=gene-C9F09_14410;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000512626.1;locus_tag=C9F09_14410;product=ubiquinone biosynthesis protein UbiB;pseudo=true;transl_table=11 ##sequence-region PYKB01001536.1 1 1192 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001536.1 Genbank region 1 1192 . + . ID=PYKB01001536.1:1..1192;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001536.1 Genbank gene 1 1192 . + . ID=gene-C9F09_26730;Name=C9F09_26730;end_range=1192,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26730;partial=true;start_range=.,1 PYKB01001536.1 Protein Homology CDS 1 1192 . + 0 ID=cds-TGC76328.1;Parent=gene-C9F09_26730;Dbxref=NCBI_GP:TGC76328.1;Name=TGC76328.1;Note=with MacA is involved in the export of macrolide;end_range=1192,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455432.1;locus_tag=C9F09_26730;partial=true;product=macrolide ABC transporter permease/ATP-binding protein MacB;protein_id=TGC76328.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000119.1 1 7623 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000119.1 Genbank region 1 7623 . + . ID=PYKB01000119.1:1..7623;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000119.1 Genbank gene 1 663 . + . ID=gene-C9F09_01340;Name=C9F09_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01340;partial=true;start_range=.,1 PYKB01000119.1 Protein Homology CDS 1 663 . + 0 ID=cds-TGD05048.1;Parent=gene-C9F09_01340;Dbxref=NCBI_GP:TGD05048.1;Name=TGD05048.1;Note=sodium:branched-chain amino acid symporter;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454993.1;locus_tag=C9F09_01340;partial=true;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=TGD05048.1;start_range=.,1;transl_table=11 PYKB01000119.1 Genbank gene 738 2108 . + . ID=gene-C9F09_01345;Name=C9F09_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01345 PYKB01000119.1 Protein Homology CDS 738 2108 . + 0 ID=cds-TGD05055.1;Parent=gene-C9F09_01345;Dbxref=NCBI_GP:TGD05055.1;Name=TGD05055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=C9F09_01345;product=proline-specific permease ProY;protein_id=TGD05055.1;transl_table=11 PYKB01000119.1 Genbank gene 2270 4087 . + . ID=gene-C9F09_01350;Name=C9F09_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01350 PYKB01000119.1 Protein Homology CDS 2270 4087 . + 0 ID=cds-TGD05049.1;Parent=gene-C9F09_01350;Dbxref=NCBI_GP:TGD05049.1;Name=TGD05049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=C9F09_01350;product=maltodextrin glucosidase;protein_id=TGD05049.1;transl_table=11 PYKB01000119.1 Genbank gene 4159 4761 . - . ID=gene-C9F09_01355;Name=C9F09_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01355 PYKB01000119.1 Protein Homology CDS 4159 4761 . - 0 ID=cds-TGD05050.1;Parent=gene-C9F09_01355;Dbxref=NCBI_GP:TGD05050.1;Name=TGD05050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818745.1;locus_tag=C9F09_01355;product=peroxiredoxin;protein_id=TGD05050.1;transl_table=11 PYKB01000119.1 Genbank gene 4971 5552 . - . ID=gene-C9F09_01360;Name=C9F09_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01360 PYKB01000119.1 Protein Homology CDS 4971 5552 . - 0 ID=cds-TGD05051.1;Parent=gene-C9F09_01360;Dbxref=NCBI_GP:TGD05051.1;Name=TGD05051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454998.1;locus_tag=C9F09_01360;product=ACP phosphodiesterase;protein_id=TGD05051.1;transl_table=11 PYKB01000119.1 Genbank gene 5646 6710 . + . ID=gene-C9F09_01365;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=C9F09_01365 PYKB01000119.1 Protein Homology CDS 5646 6710 . + 0 ID=cds-TGD05052.1;Parent=gene-C9F09_01365;Dbxref=NCBI_GP:TGD05052.1;Name=TGD05052.1;gbkey=CDS;gene=queA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=C9F09_01365;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=TGD05052.1;transl_table=11 PYKB01000119.1 Genbank gene 6733 6843 . + . ID=gene-C9F09_01370;Name=C9F09_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01370 PYKB01000119.1 Protein Homology CDS 6733 6843 . + 0 ID=cds-TGD05053.1;Parent=gene-C9F09_01370;Dbxref=NCBI_GP:TGD05053.1;Name=TGD05053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219073.1;locus_tag=C9F09_01370;product=DNA metabolism protein;protein_id=TGD05053.1;transl_table=11 PYKB01000119.1 Genbank gene 6907 7623 . + . ID=gene-C9F09_01375;Name=tgt;end_range=7623,.;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=C9F09_01375;partial=true PYKB01000119.1 Protein Homology CDS 6907 7623 . + 0 ID=cds-TGD05054.1;Parent=gene-C9F09_01375;Dbxref=NCBI_GP:TGD05054.1;Name=TGD05054.1;end_range=7623,.;gbkey=CDS;gene=tgt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455000.1;locus_tag=C9F09_01375;partial=true;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=TGD05054.1;transl_table=11 ##sequence-region PYKB01001184.1 1 1192 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001184.1 Genbank region 1 1192 . + . ID=PYKB01001184.1:1..1192;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001184.1 Genbank gene 1 1192 . - . ID=gene-C9F09_20135;Name=C9F09_20135;end_range=1192,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20135;partial=true;start_range=.,1 PYKB01001184.1 Protein Homology CDS 1 1192 . - 1 ID=cds-TGC83941.1;Parent=gene-C9F09_20135;Dbxref=NCBI_GP:TGC83941.1;Name=TGC83941.1;end_range=1192,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=C9F09_20135;partial=true;product=ABC transporter permease;protein_id=TGC83941.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001145.1 1 1191 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001145.1 Genbank region 1 1191 . + . ID=PYKB01001145.1:1..1191;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001145.1 Genbank pseudogene 72 311 . + . ID=gene-C9F09_19370;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=pseudogene;locus_tag=C9F09_19370;pseudo=true PYKB01001145.1 Protein Homology CDS 72 311 . + 0 ID=cds-C9F09_19370;Parent=gene-C9F09_19370;Note=in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907882.1;locus_tag=C9F09_19370;product=molybdenum cofactor guanylyltransferase MobA;pseudo=true;transl_table=11 PYKB01001145.1 Genbank gene 308 823 . + . ID=gene-C9F09_19375;Name=C9F09_19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19375 PYKB01001145.1 Protein Homology CDS 308 823 . + 0 ID=cds-TGC84823.1;Parent=gene-C9F09_19375;Dbxref=NCBI_GP:TGC84823.1;Name=TGC84823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=C9F09_19375;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=TGC84823.1;transl_table=11 ##sequence-region PYKB01000792.1 1 1186 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000792.1 Genbank region 1 1186 . + . ID=PYKB01000792.1:1..1186;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000792.1 Genbank gene 1 144 . - . ID=gene-C9F09_12305;Name=C9F09_12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12305;partial=true;start_range=.,1 PYKB01000792.1 Protein Homology CDS 1 144 . - 0 ID=cds-TGC92293.1;Parent=gene-C9F09_12305;Dbxref=NCBI_GP:TGC92293.1;Name=TGC92293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454955.1;locus_tag=C9F09_12305;partial=true;product=cytochrome ubiquinol oxidase subunit I;protein_id=TGC92293.1;start_range=.,1;transl_table=11 PYKB01000792.1 Genbank gene 261 362 . - . ID=gene-C9F09_12310;Name=C9F09_12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12310 PYKB01000792.1 Protein Homology CDS 261 362 . - 0 ID=cds-TGC92294.1;Parent=gene-C9F09_12310;Dbxref=NCBI_GP:TGC92294.1;Name=TGC92294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=C9F09_12310;product=hypothetical protein;protein_id=TGC92294.1;transl_table=11 PYKB01000792.1 Genbank gene 639 1186 . - . ID=gene-C9F09_12315;Name=C9F09_12315;end_range=1186,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12315;partial=true PYKB01000792.1 Protein Homology CDS 639 1186 . - 2 ID=cds-TGC92295.1;Parent=gene-C9F09_12315;Dbxref=NCBI_GP:TGC92295.1;Name=TGC92295.1;Note=cleaves DNA 25 basepairs downstream from the recognition site;end_range=1186,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=C9F09_12315;partial=true;product=type III restriction endonuclease subunit R;protein_id=TGC92295.1;transl_table=11 ##sequence-region PYKB01000864.1 1 1183 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000864.1 Genbank region 1 1183 . + . ID=PYKB01000864.1:1..1183;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000864.1 Genbank gene 1 189 . - . ID=gene-C9F09_13990;Name=C9F09_13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13990;partial=true;start_range=.,1 PYKB01000864.1 Protein Homology CDS 1 189 . - 0 ID=cds-TGC90891.1;Parent=gene-C9F09_13990;Dbxref=NCBI_GP:TGC90891.1;Name=TGC90891.1;Note=catalyzes phosphorylation of fructose%3B cytosolic enzyme;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454988.1;locus_tag=C9F09_13990;partial=true;product=fructokinase;protein_id=TGC90891.1;start_range=.,1;transl_table=11 PYKB01000864.1 Genbank pseudogene 315 1183 . + . ID=gene-C9F09_13995;Name=C9F09_13995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13995;pseudo=true PYKB01000864.1 Protein Homology CDS 315 1183 . + 0 ID=cds-C9F09_13995;Parent=gene-C9F09_13995;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=C9F09_13995;product=recombination-associated protein RdgC;pseudo=true;transl_table=11 ##sequence-region PYKB01000092.1 1 1183 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000092.1 Genbank region 1 1183 . + . ID=PYKB01000092.1:1..1183;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000092.1 Genbank pseudogene 1 264 . + . ID=gene-C9F09_01095;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=pseudogene;locus_tag=C9F09_01095;pseudo=true PYKB01000092.1 Protein Homology CDS 1 264 . + 0 ID=cds-C9F09_01095;Parent=gene-C9F09_01095;Note=catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=cdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454829.1;locus_tag=C9F09_01095;product=CDP-diglyceride synthetase;pseudo=true;transl_table=11 PYKB01000092.1 Genbank gene 276 1183 . + . ID=gene-C9F09_01100;Name=C9F09_01100;end_range=1183,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01100;partial=true PYKB01000092.1 Protein Homology CDS 276 1183 . + 0 ID=cds-TGD05616.1;Parent=gene-C9F09_01100;Dbxref=NCBI_GP:TGD05616.1;Name=TGD05616.1;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;end_range=1183,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454830.1;locus_tag=C9F09_01100;partial=true;product=zinc metallopeptidase RseP;protein_id=TGD05616.1;transl_table=11 ##sequence-region PYKB01001562.1 1 1179 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001562.1 Genbank region 1 1179 . + . ID=PYKB01001562.1:1..1179;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001562.1 Genbank gene 1 1113 . + . ID=gene-C9F09_27265;Name=C9F09_27265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27265;partial=true;start_range=.,1 PYKB01001562.1 Protein Homology CDS 1 1113 . + 0 ID=cds-TGC75777.1;Parent=gene-C9F09_27265;Dbxref=NCBI_GP:TGC75777.1;Name=TGC75777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=C9F09_27265;partial=true;product=exodeoxyribonuclease VII large subunit;protein_id=TGC75777.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001223.1 1 1177 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001223.1 Genbank region 1 1177 . + . ID=PYKB01001223.1:1..1177;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001223.1 Genbank gene 94 1177 . + . ID=gene-C9F09_20730;Name=C9F09_20730;end_range=1177,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20730;partial=true PYKB01001223.1 Protein Homology CDS 94 1177 . + 0 ID=cds-TGC83023.1;Parent=gene-C9F09_20730;Dbxref=NCBI_GP:TGC83023.1;Name=TGC83023.1;end_range=1177,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463279.1;locus_tag=C9F09_20730;partial=true;product=MFS transporter;protein_id=TGC83023.1;transl_table=11 ##sequence-region PYKB01000644.1 1 1176 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000644.1 Genbank region 1 1176 . + . ID=PYKB01000644.1:1..1176;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000644.1 Genbank gene 1 1176 . + . ID=gene-C9F09_09675;Name=C9F09_09675;end_range=1176,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09675;partial=true;start_range=.,1 PYKB01000644.1 Protein Homology CDS 1 1176 . + 2 ID=cds-TGC94450.1;Parent=gene-C9F09_09675;Dbxref=NCBI_GP:TGC94450.1;Name=TGC94450.1;end_range=1176,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458344.1;locus_tag=C9F09_09675;partial=true;product=methyl-accepting chemotaxis citrate transducer;protein_id=TGC94450.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000579.1 1 1174 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000579.1 Genbank region 1 1174 . + . ID=PYKB01000579.1:1..1174;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000579.1 Genbank gene 1 153 . - . ID=gene-C9F09_08265;Name=C9F09_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08265;partial=true;start_range=.,1 PYKB01000579.1 Protein Homology CDS 1 153 . - 0 ID=cds-TGC95819.1;Parent=gene-C9F09_08265;Dbxref=NCBI_GP:TGC95819.1;Name=TGC95819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456736.1;locus_tag=C9F09_08265;partial=true;product=5-carboxymethyl-2-hydroxymuconate isomerase;protein_id=TGC95819.1;start_range=.,1;transl_table=11 PYKB01000579.1 Genbank gene 169 1174 . - . ID=gene-C9F09_08270;Name=gtdA;end_range=1174,.;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=C9F09_08270;partial=true PYKB01000579.1 Protein Homology CDS 169 1174 . - 1 ID=cds-TGC95820.1;Parent=gene-C9F09_08270;Dbxref=NCBI_GP:TGC95820.1;Name=TGC95820.1;end_range=1174,.;gbkey=CDS;gene=gtdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=C9F09_08270;partial=true;product=gentisate 1%2C2-dioxygenase;protein_id=TGC95820.1;transl_table=11 ##sequence-region PYKB01001605.1 1 1173 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001605.1 Genbank region 1 1173 . + . ID=PYKB01001605.1:1..1173;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001605.1 Genbank pseudogene 55 570 . + . ID=gene-C9F09_28160;Name=C9F09_28160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28160;pseudo=true PYKB01001605.1 Protein Homology CDS 55 570 . + 0 ID=cds-C9F09_28160;Parent=gene-C9F09_28160;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=C9F09_28160;product=two-component sensor histidine kinase;pseudo=true;transl_table=11 PYKB01001605.1 Genbank gene 646 1173 . + . ID=gene-C9F09_28165;Name=tus;end_range=1173,.;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=C9F09_28165;partial=true PYKB01001605.1 Protein Homology CDS 646 1173 . + 0 ID=cds-TGC74733.1;Parent=gene-C9F09_28165;Dbxref=NCBI_GP:TGC74733.1;Name=TGC74733.1;end_range=1173,.;gbkey=CDS;gene=tus;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=C9F09_28165;partial=true;product=DNA replication terminus site-binding protein;protein_id=TGC74733.1;transl_table=11 ##sequence-region PYKB01001232.1 1 15933 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001232.1 Genbank region 1 15933 . + . ID=PYKB01001232.1:1..15933;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001232.1 Genbank gene 21 824 . - . ID=gene-C9F09_20840;Name=C9F09_20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20840 PYKB01001232.1 Protein Homology CDS 21 824 . - 0 ID=cds-TGC82870.1;Parent=gene-C9F09_20840;Dbxref=NCBI_GP:TGC82870.1;Name=TGC82870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455477.1;locus_tag=C9F09_20840;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=TGC82870.1;transl_table=11 PYKB01001232.1 Genbank gene 960 1736 . + . ID=gene-C9F09_20845;Name=C9F09_20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20845 PYKB01001232.1 Protein Homology CDS 960 1736 . + 0 ID=cds-TGC82871.1;Parent=gene-C9F09_20845;Dbxref=NCBI_GP:TGC82871.1;Name=TGC82871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455476.1;locus_tag=C9F09_20845;product=envelope biogenesis factor ElyC;protein_id=TGC82871.1;transl_table=11 PYKB01001232.1 Genbank gene 1716 2609 . - . ID=gene-C9F09_20850;Name=C9F09_20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20850 PYKB01001232.1 Protein Homology CDS 1716 2609 . - 0 ID=cds-TGC82872.1;Parent=gene-C9F09_20850;Dbxref=NCBI_GP:TGC82872.1;Name=TGC82872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=C9F09_20850;product=hypothetical protein;protein_id=TGC82872.1;transl_table=11 PYKB01001232.1 Genbank gene 2820 3566 . - . ID=gene-C9F09_20855;Name=C9F09_20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20855 PYKB01001232.1 Protein Homology CDS 2820 3566 . - 0 ID=cds-TGC82873.1;Parent=gene-C9F09_20855;Dbxref=NCBI_GP:TGC82873.1;Name=TGC82873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=C9F09_20855;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=TGC82873.1;transl_table=11 PYKB01001232.1 Genbank gene 3563 3745 . - . ID=gene-C9F09_20860;Name=C9F09_20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20860 PYKB01001232.1 Protein Homology CDS 3563 3745 . - 0 ID=cds-TGC82874.1;Parent=gene-C9F09_20860;Dbxref=NCBI_GP:TGC82874.1;Name=TGC82874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455473.1;locus_tag=C9F09_20860;product=hypothetical protein;protein_id=TGC82874.1;transl_table=11 PYKB01001232.1 Genbank gene 3797 5029 . - . ID=gene-C9F09_20865;Name=C9F09_20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20865 PYKB01001232.1 Protein Homology CDS 3797 5029 . - 0 ID=cds-TGC82875.1;Parent=gene-C9F09_20865;Dbxref=NCBI_GP:TGC82875.1;Name=TGC82875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=C9F09_20865;product=hypothetical protein;protein_id=TGC82875.1;transl_table=11 PYKB01001232.1 Genbank gene 5073 6050 . - . ID=gene-C9F09_20870;Name=C9F09_20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20870 PYKB01001232.1 Protein Homology CDS 5073 6050 . - 0 ID=cds-TGC82876.1;Parent=gene-C9F09_20870;Dbxref=NCBI_GP:TGC82876.1;Name=TGC82876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455472.1;locus_tag=C9F09_20870;product=tetraacyldisaccharide 4'-kinase;protein_id=TGC82876.1;transl_table=11 PYKB01001232.1 Genbank gene 6047 7795 . - . ID=gene-C9F09_20875;Name=C9F09_20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20875 PYKB01001232.1 Protein Homology CDS 6047 7795 . - 0 ID=cds-TGC82877.1;Parent=gene-C9F09_20875;Dbxref=NCBI_GP:TGC82877.1;Name=TGC82877.1;Note=involved in the transport of lipid A across the inner membrane;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455471.1;locus_tag=C9F09_20875;product=lipid A export ATP-binding/permease MsbA;protein_id=TGC82877.1;transl_table=11 PYKB01001232.1 Genbank gene 7832 10096 . - . ID=gene-C9F09_20880;Name=C9F09_20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20880 PYKB01001232.1 Protein Homology CDS 7832 10096 . - 0 ID=cds-TGC82878.1;Parent=gene-C9F09_20880;Dbxref=NCBI_GP:TGC82878.1;Name=TGC82878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=C9F09_20880;product=ComEC family protein;protein_id=TGC82878.1;transl_table=11 PYKB01001232.1 Genbank gene 10359 10610 . - . ID=gene-C9F09_20885;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=C9F09_20885 PYKB01001232.1 Protein Homology CDS 10359 10610 . - 0 ID=cds-TGC82879.1;Parent=gene-C9F09_20885;Dbxref=NCBI_GP:TGC82879.1;Name=TGC82879.1;gbkey=CDS;gene=ihfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455469.1;locus_tag=C9F09_20885;product=integration host factor subunit beta;protein_id=TGC82879.1;transl_table=11 PYKB01001232.1 Genbank gene 10766 12439 . - . ID=gene-C9F09_20890;Name=C9F09_20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20890 PYKB01001232.1 Protein Homology CDS 10766 12439 . - 0 ID=cds-TGC82880.1;Parent=gene-C9F09_20890;Dbxref=NCBI_GP:TGC82880.1;Name=TGC82880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=C9F09_20890;product=30S ribosomal protein S1;protein_id=TGC82880.1;transl_table=11 PYKB01001232.1 Genbank gene 12553 13236 . - . ID=gene-C9F09_20895;Name=C9F09_20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20895 PYKB01001232.1 Protein Homology CDS 12553 13236 . - 0 ID=cds-TGC82881.1;Parent=gene-C9F09_20895;Dbxref=NCBI_GP:TGC82881.1;Name=TGC82881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=C9F09_20895;product=cytidylate kinase;protein_id=TGC82881.1;transl_table=11 PYKB01001232.1 Genbank gene 13409 14170 . - . ID=gene-C9F09_20900;Name=C9F09_20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20900 PYKB01001232.1 Protein Homology CDS 13409 14170 . - 0 ID=cds-TGC82882.1;Parent=gene-C9F09_20900;Dbxref=NCBI_GP:TGC82882.1;Name=TGC82882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=C9F09_20900;product=metalloprotease;protein_id=TGC82882.1;transl_table=11 PYKB01001232.1 Genbank gene 14313 15596 . - . ID=gene-C9F09_20905;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=C9F09_20905 PYKB01001232.1 Protein Homology CDS 14313 15596 . - 0 ID=cds-TGC82883.1;Parent=gene-C9F09_20905;Dbxref=NCBI_GP:TGC82883.1;Name=TGC82883.1;gbkey=CDS;gene=aroA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=C9F09_20905;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=TGC82883.1;transl_table=11 PYKB01001232.1 Genbank gene 15667 15933 . - . ID=gene-C9F09_20910;Name=C9F09_20910;end_range=15933,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20910;partial=true PYKB01001232.1 Protein Homology CDS 15667 15933 . - 0 ID=cds-TGC82884.1;Parent=gene-C9F09_20910;Dbxref=NCBI_GP:TGC82884.1;Name=TGC82884.1;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;end_range=15933,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057138.1;locus_tag=C9F09_20910;partial=true;product=phosphoserine transaminase;protein_id=TGC82884.1;transl_table=11 ##sequence-region PYKB01000871.1 1 1172 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000871.1 Genbank region 1 1172 . + . ID=PYKB01000871.1:1..1172;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000871.1 Genbank gene 1 774 . + . ID=gene-C9F09_14140;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=C9F09_14140;partial=true;start_range=.,1 PYKB01000871.1 Protein Homology CDS 1 774 . + 0 ID=cds-TGC90782.1;Parent=gene-C9F09_14140;Dbxref=NCBI_GP:TGC90782.1;Name=TGC90782.1;gbkey=CDS;gene=sucB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455293.1;locus_tag=C9F09_14140;partial=true;product=dihydrolipoyllysine-residue succinyltransferase;protein_id=TGC90782.1;start_range=.,1;transl_table=11 PYKB01000871.1 Genbank gene 916 1172 . + . ID=gene-C9F09_14145;Name=sucC;end_range=1172,.;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=C9F09_14145;partial=true PYKB01000871.1 Protein Homology CDS 916 1172 . + 0 ID=cds-TGC90783.1;Parent=gene-C9F09_14145;Dbxref=NCBI_GP:TGC90783.1;Name=TGC90783.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;end_range=1172,.;gbkey=CDS;gene=sucC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=C9F09_14145;partial=true;product=succinate--CoA ligase subunit beta;protein_id=TGC90783.1;transl_table=11 ##sequence-region PYKB01001007.1 1 1166 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001007.1 Genbank region 1 1166 . + . ID=PYKB01001007.1:1..1166;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001007.1 Genbank gene 1 484 . + . ID=gene-C9F09_16795;Name=C9F09_16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16795;partial=true;start_range=.,1 PYKB01001007.1 Protein Homology CDS 1 484 . + 1 ID=cds-TGC88139.1;Parent=gene-C9F09_16795;Dbxref=NCBI_GP:TGC88139.1;Name=TGC88139.1;Note=activates the transcription of the lysA gene encoding diaminopimelate decarboxylase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457409.1;locus_tag=C9F09_16795;partial=true;product=LysR family transcriptional regulator;protein_id=TGC88139.1;start_range=.,1;transl_table=11 PYKB01001007.1 Genbank gene 456 1136 . - . ID=gene-C9F09_16800;Name=C9F09_16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16800 PYKB01001007.1 Protein Homology CDS 456 1136 . - 0 ID=cds-TGC88138.1;Parent=gene-C9F09_16800;Dbxref=NCBI_GP:TGC88138.1;Name=TGC88138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540847.1;locus_tag=C9F09_16800;product=aspartate/glutamate racemase;protein_id=TGC88138.1;transl_table=11 ##sequence-region PYKB01001638.1 1 1163 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001638.1 Genbank region 1 1163 . + . ID=PYKB01001638.1:1..1163;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001638.1 Genbank gene 1 362 . - . ID=gene-C9F09_28615;Name=C9F09_28615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28615;partial=true;start_range=.,1 PYKB01001638.1 Protein Homology CDS 1 362 . - 0 ID=cds-TGC73840.1;Parent=gene-C9F09_28615;Dbxref=NCBI_GP:TGC73840.1;Name=TGC73840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=C9F09_28615;partial=true;product=hypothetical protein;protein_id=TGC73840.1;start_range=.,1;transl_table=11 PYKB01001638.1 Genbank gene 362 1117 . - . ID=gene-C9F09_28620;Name=C9F09_28620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28620 PYKB01001638.1 Protein Homology CDS 362 1117 . - 0 ID=cds-TGC73839.1;Parent=gene-C9F09_28620;Dbxref=NCBI_GP:TGC73839.1;Name=TGC73839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458097.1;locus_tag=C9F09_28620;product=hypothetical protein;protein_id=TGC73839.1;transl_table=11 ##sequence-region PYKB01000204.1 1 1161 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000204.1 Genbank region 1 1161 . + . ID=PYKB01000204.1:1..1161;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000204.1 Genbank gene 1 552 . + . ID=gene-C9F09_02235;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=C9F09_02235;partial=true;start_range=.,1 PYKB01000204.1 Protein Homology CDS 1 552 . + 0 ID=cds-TGD03657.1;Parent=gene-C9F09_02235;Dbxref=NCBI_GP:TGD03657.1;Name=TGD03657.1;Note=catalyzes the formation of glycolate and glycerate from glyoxylate and hydroxypyruvate%2C respectively;gbkey=CDS;gene=ghrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455629.1;locus_tag=C9F09_02235;partial=true;product=bifunctional glyoxylate/hydroxypyruvate reductase A;protein_id=TGD03657.1;start_range=.,1;transl_table=11 PYKB01000204.1 Genbank gene 637 1161 . + . ID=gene-C9F09_02240;Name=C9F09_02240;end_range=1161,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02240;partial=true PYKB01000204.1 Protein Homology CDS 637 1161 . + 0 ID=cds-TGD03658.1;Parent=gene-C9F09_02240;Dbxref=NCBI_GP:TGD03658.1;Name=TGD03658.1;end_range=1161,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455630.1;locus_tag=C9F09_02240;partial=true;product=phosphatase;protein_id=TGD03658.1;transl_table=11 ##sequence-region PYKB01000234.1 1 1160 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000234.1 Genbank region 1 1160 . + . ID=PYKB01000234.1:1..1160;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000234.1 Genbank pseudogene 77 388 . + . ID=gene-C9F09_02555;Name=C9F09_02555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02555;pseudo=true PYKB01000234.1 Protein Homology CDS 77 388 . + 0 ID=cds-C9F09_02555;Parent=gene-C9F09_02555;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=C9F09_02555;product=heat shock protein HspQ;pseudo=true;transl_table=11 PYKB01000234.1 Genbank gene 439 855 . - . ID=gene-C9F09_02560;Name=C9F09_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02560 PYKB01000234.1 Protein Homology CDS 439 855 . - 0 ID=cds-TGD03021.1;Parent=gene-C9F09_02560;Dbxref=NCBI_GP:TGD03021.1;Name=TGD03021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455576.1;locus_tag=C9F09_02560;product=CoA-binding protein;protein_id=TGD03021.1;transl_table=11 ##sequence-region PYKB01000650.1 1 1159 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000650.1 Genbank region 1 1159 . + . ID=PYKB01000650.1:1..1159;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000650.1 Genbank gene 1 1159 . - . ID=gene-C9F09_09755;Name=C9F09_09755;end_range=1159,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09755;partial=true;start_range=.,1 PYKB01000650.1 Protein Homology CDS 1 1159 . - 1 ID=cds-TGC94379.1;Parent=gene-C9F09_09755;Dbxref=NCBI_GP:TGC94379.1;Name=TGC94379.1;end_range=1159,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=C9F09_09755;partial=true;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=TGC94379.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000763.1 1 1158 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000763.1 Genbank region 1 1158 . + . ID=PYKB01000763.1:1..1158;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000763.1 Genbank pseudogene 23 1158 . - . ID=gene-C9F09_11810;Name=C9F09_11810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11810;pseudo=true PYKB01000763.1 Protein Homology CDS 23 1158 . - 2 ID=cds-C9F09_11810;Parent=gene-C9F09_11810;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457352.1;locus_tag=C9F09_11810;product=GTP diphosphokinase;pseudo=true;transl_table=11 ##sequence-region PYKB01001681.1 1 1157 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001681.1 Genbank region 1 1157 . + . ID=PYKB01001681.1:1..1157;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001681.1 Genbank gene 1 165 . - . ID=gene-C9F09_29215;Name=C9F09_29215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29215;partial=true;start_range=.,1 PYKB01001681.1 Protein Homology CDS 1 165 . - 0 ID=cds-TGC72793.1;Parent=gene-C9F09_29215;Dbxref=NCBI_GP:TGC72793.1;Name=TGC72793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454717.1;locus_tag=C9F09_29215;partial=true;product=DedA family protein;protein_id=TGC72793.1;start_range=.,1;transl_table=11 PYKB01001681.1 Genbank gene 284 1129 . - . ID=gene-C9F09_29220;Name=C9F09_29220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29220 PYKB01001681.1 Protein Homology CDS 284 1129 . - 0 ID=cds-TGC72794.1;Parent=gene-C9F09_29220;Dbxref=NCBI_GP:TGC72794.1;Name=TGC72794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=C9F09_29220;product=arabinose operon transcriptional regulator AraC;protein_id=TGC72794.1;transl_table=11 ##sequence-region PYKB01000747.1 1 1154 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000747.1 Genbank region 1 1154 . + . ID=PYKB01000747.1:1..1154;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000747.1 Genbank gene 1 285 . - . ID=gene-C9F09_11495;Name=C9F09_11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11495;partial=true;start_range=.,1 PYKB01000747.1 Protein Homology CDS 1 285 . - 0 ID=cds-TGC92948.1;Parent=gene-C9F09_11495;Dbxref=NCBI_GP:TGC92948.1;Name=TGC92948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=C9F09_11495;partial=true;product=molecular chaperone HscC;protein_id=TGC92948.1;start_range=.,1;transl_table=11 PYKB01000747.1 Genbank gene 361 1154 . - . ID=gene-C9F09_11500;Name=C9F09_11500;end_range=1154,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11500;partial=true PYKB01000747.1 Protein Homology CDS 361 1154 . - 2 ID=cds-TGC92949.1;Parent=gene-C9F09_11500;Dbxref=NCBI_GP:TGC92949.1;Name=TGC92949.1;end_range=1154,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=C9F09_11500;partial=true;product=hypothetical protein;protein_id=TGC92949.1;transl_table=11 ##sequence-region PYKB01001739.1 1 1150 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001739.1 Genbank region 1 1150 . + . ID=PYKB01001739.1:1..1150;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001739.1 Genbank gene 1 195 . - . ID=gene-C9F09_30500;Name=C9F09_30500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30500;partial=true;start_range=.,1 PYKB01001739.1 GeneMarkS+ CDS 1 195 . - 0 ID=cds-TGC70776.1;Parent=gene-C9F09_30500;Dbxref=NCBI_GP:TGC70776.1;Name=TGC70776.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_30500;partial=true;product=hypothetical protein;protein_id=TGC70776.1;start_range=.,1;transl_table=11 PYKB01001739.1 Genbank gene 352 1149 . - . ID=gene-C9F09_30505;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=C9F09_30505 PYKB01001739.1 Protein Homology CDS 352 1149 . - 0 ID=cds-TGC70777.1;Parent=gene-C9F09_30505;Dbxref=NCBI_GP:TGC70777.1;Name=TGC70777.1;gbkey=CDS;gene=iolB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004117568.1;locus_tag=C9F09_30505;product=5-deoxy-glucuronate isomerase;protein_id=TGC70777.1;transl_table=11 ##sequence-region PYKB01000886.1 1 7597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000886.1 Genbank region 1 7597 . + . ID=PYKB01000886.1:1..7597;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000886.1 Genbank gene 1 639 . + . ID=gene-C9F09_14440;Name=C9F09_14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14440;partial=true;start_range=.,1 PYKB01000886.1 Protein Homology CDS 1 639 . + 0 ID=cds-TGC90500.1;Parent=gene-C9F09_14440;Dbxref=NCBI_GP:TGC90500.1;Name=TGC90500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455562.1;locus_tag=C9F09_14440;partial=true;product=paraquat-inducible protein B;protein_id=TGC90500.1;start_range=.,1;transl_table=11 PYKB01000886.1 Genbank gene 636 1199 . + . ID=gene-C9F09_14445;Name=C9F09_14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14445 PYKB01000886.1 Protein Homology CDS 636 1199 . + 0 ID=cds-TGC90501.1;Parent=gene-C9F09_14445;Dbxref=NCBI_GP:TGC90501.1;Name=TGC90501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455563.1;locus_tag=C9F09_14445;product=hypothetical protein;protein_id=TGC90501.1;transl_table=11 PYKB01000886.1 Genbank gene 1455 1622 . + . ID=gene-C9F09_14450;Name=C9F09_14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14450 PYKB01000886.1 Protein Homology CDS 1455 1622 . + 0 ID=cds-TGC90502.1;Parent=gene-C9F09_14450;Dbxref=NCBI_GP:TGC90502.1;Name=TGC90502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=C9F09_14450;product=ribosome modulation factor;protein_id=TGC90502.1;transl_table=11 PYKB01000886.1 Genbank gene 1722 2240 . - . ID=gene-C9F09_14455;Name=C9F09_14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14455 PYKB01000886.1 Protein Homology CDS 1722 2240 . - 0 ID=cds-TGC90503.1;Parent=gene-C9F09_14455;Dbxref=NCBI_GP:TGC90503.1;Name=TGC90503.1;Note=catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455565.1;locus_tag=C9F09_14455;product=beta-hydroxydecanoyl-ACP dehydratase;protein_id=TGC90503.1;transl_table=11 PYKB01000886.1 Genbank gene 2309 4069 . - . ID=gene-C9F09_14460;Name=C9F09_14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14460 PYKB01000886.1 Protein Homology CDS 2309 4069 . - 0 ID=cds-TGC90504.1;Parent=gene-C9F09_14460;Dbxref=NCBI_GP:TGC90504.1;Name=TGC90504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=C9F09_14460;product=Lon protease family protein;protein_id=TGC90504.1;transl_table=11 PYKB01000886.1 Genbank gene 4255 4707 . + . ID=gene-C9F09_14465;Name=C9F09_14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14465 PYKB01000886.1 Protein Homology CDS 4255 4707 . + 0 ID=cds-TGC90505.1;Parent=gene-C9F09_14465;Dbxref=NCBI_GP:TGC90505.1;Name=TGC90505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=C9F09_14465;product=macrodomain Ter protein;protein_id=TGC90505.1;transl_table=11 PYKB01000886.1 Genbank gene 4779 5831 . - . ID=gene-C9F09_14470;Name=C9F09_14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14470 PYKB01000886.1 Protein Homology CDS 4779 5831 . - 0 ID=cds-TGC90508.1;Parent=gene-C9F09_14470;Dbxref=NCBI_GP:TGC90508.1;Name=TGC90508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=C9F09_14470;product=porin OmpA;protein_id=TGC90508.1;transl_table=11 PYKB01000886.1 Genbank gene 6188 6697 . - . ID=gene-C9F09_14475;Name=C9F09_14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14475 PYKB01000886.1 Protein Homology CDS 6188 6697 . - 0 ID=cds-TGC90506.1;Parent=gene-C9F09_14475;Dbxref=NCBI_GP:TGC90506.1;Name=TGC90506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455569.1;locus_tag=C9F09_14475;product=cell division inhibitor SulA;protein_id=TGC90506.1;transl_table=11 PYKB01000886.1 Genbank gene 6914 7519 . + . ID=gene-C9F09_14480;Name=C9F09_14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14480 PYKB01000886.1 Protein Homology CDS 6914 7519 . + 0 ID=cds-TGC90507.1;Parent=gene-C9F09_14480;Dbxref=NCBI_GP:TGC90507.1;Name=TGC90507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=C9F09_14480;product=DNA transformation protein;protein_id=TGC90507.1;transl_table=11 ##sequence-region PYKB01001512.1 1 1148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001512.1 Genbank region 1 1148 . + . ID=PYKB01001512.1:1..1148;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001512.1 Genbank gene 1 696 . + . ID=gene-C9F09_26250;Name=C9F09_26250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26250;partial=true;start_range=.,1 PYKB01001512.1 Protein Homology CDS 1 696 . + 0 ID=cds-TGC76996.1;Parent=gene-C9F09_26250;Dbxref=NCBI_GP:TGC76996.1;Name=TGC76996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457052.1;locus_tag=C9F09_26250;partial=true;product=outer membrane protein assembly factor BamB;protein_id=TGC76996.1;start_range=.,1;transl_table=11 PYKB01001512.1 Genbank gene 813 1148 . + . ID=gene-C9F09_26255;Name=C9F09_26255;end_range=1148,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26255;partial=true PYKB01001512.1 Protein Homology CDS 813 1148 . + 0 ID=cds-TGC76997.1;Parent=gene-C9F09_26255;Dbxref=NCBI_GP:TGC76997.1;Name=TGC76997.1;end_range=1148,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457051.1;locus_tag=C9F09_26255;partial=true;product=ribosome biogenesis GTPase Der;protein_id=TGC76997.1;transl_table=11 ##sequence-region PYKB01001173.1 1 1147 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001173.1 Genbank region 1 1147 . + . ID=PYKB01001173.1:1..1147;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001173.1 Genbank gene 1 160 . + . ID=gene-C9F09_19800;Name=C9F09_19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19800;partial=true;start_range=.,1 PYKB01001173.1 Protein Homology CDS 1 160 . + 1 ID=cds-TGC84168.1;Parent=gene-C9F09_19800;Dbxref=NCBI_GP:TGC84168.1;Name=TGC84168.1;Note=catalyzes the formation of selenophosphate from selenide and ATP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=C9F09_19800;partial=true;product=selenide%2C water dikinase SelD;protein_id=TGC84168.1;start_range=.,1;transl_table=11 PYKB01001173.1 Genbank pseudogene 165 1121 . + . ID=gene-C9F09_19805;Name=C9F09_19805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_19805;pseudo=true PYKB01001173.1 Protein Homology CDS 165 1121 . + 0 ID=cds-C9F09_19805;Parent=gene-C9F09_19805;Note=decatenates replicating daughter chromosomes%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456214.1;locus_tag=C9F09_19805;product=DNA topoisomerase III;pseudo=true;transl_table=11 ##sequence-region PYKB01000785.1 1 1144 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000785.1 Genbank region 1 1144 . + . ID=PYKB01000785.1:1..1144;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000785.1 Genbank pseudogene 1 809 . - . ID=gene-C9F09_12150;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=pseudogene;gene_synonym=yleB;locus_tag=C9F09_12150;pseudo=true PYKB01000785.1 Protein Homology CDS 1 809 . - 0 ID=cds-C9F09_12150;Parent=gene-C9F09_12150;Note=catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;gene=ubiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=C9F09_12150;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;pseudo=true;transl_table=11 PYKB01000785.1 Genbank gene 953 1144 . + . ID=gene-C9F09_12155;Name=C9F09_12155;end_range=1144,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12155;partial=true PYKB01000785.1 Protein Homology CDS 953 1144 . + 0 ID=cds-TGC92398.1;Parent=gene-C9F09_12155;Dbxref=NCBI_GP:TGC92398.1;Name=TGC92398.1;end_range=1144,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308726.1;locus_tag=C9F09_12155;partial=true;product=hypothetical protein;protein_id=TGC92398.1;transl_table=11 ##sequence-region PYKB01000668.1 1 1143 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000668.1 Genbank region 1 1143 . + . ID=PYKB01000668.1:1..1143;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000668.1 Genbank pseudogene 1 180 . + . ID=gene-C9F09_10030;Name=C9F09_10030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10030;pseudo=true PYKB01000668.1 Protein Homology CDS 1 180 . + 0 ID=cds-C9F09_10030;Parent=gene-C9F09_10030;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=C9F09_10030;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000668.1 Genbank pseudogene 177 1076 . + . ID=gene-C9F09_10035;Name=C9F09_10035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10035;pseudo=true PYKB01000668.1 Protein Homology CDS 177 1076 . + 0 ID=cds-C9F09_10035;Parent=gene-C9F09_10035;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455261.1;locus_tag=C9F09_10035;product=putrescine-ornithine antiporter;pseudo=true;transl_table=11 ##sequence-region PYKB01001315.1 1 1138 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001315.1 Genbank region 1 1138 . + . ID=PYKB01001315.1:1..1138;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001315.1 Genbank gene 1 653 . + . ID=gene-C9F09_22615;Name=C9F09_22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22615;partial=true;start_range=.,1 PYKB01001315.1 Protein Homology CDS 1 653 . + 2 ID=cds-TGC81260.1;Parent=gene-C9F09_22615;Dbxref=NCBI_GP:TGC81260.1;Name=TGC81260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=C9F09_22615;partial=true;product=LysR family transcriptional regulator;protein_id=TGC81260.1;start_range=.,1;transl_table=11 PYKB01001315.1 Genbank gene 691 951 . + . ID=gene-C9F09_22620;Name=C9F09_22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22620 PYKB01001315.1 Protein Homology CDS 691 951 . + 0 ID=cds-TGC81261.1;Parent=gene-C9F09_22620;Dbxref=NCBI_GP:TGC81261.1;Name=TGC81261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=C9F09_22620;product=ferredoxin;protein_id=TGC81261.1;transl_table=11 ##sequence-region PYKB01001269.1 1 1138 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001269.1 Genbank region 1 1138 . + . ID=PYKB01001269.1:1..1138;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001269.1 Genbank pseudogene 1 1073 . - . ID=gene-C9F09_21710;Name=C9F09_21710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21710;pseudo=true PYKB01001269.1 Protein Homology CDS 1 1073 . - 0 ID=cds-C9F09_21710;Parent=gene-C9F09_21710;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044775.1;locus_tag=C9F09_21710;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000666.1 1 1138 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000666.1 Genbank region 1 1138 . + . ID=PYKB01000666.1:1..1138;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000666.1 Genbank gene 1 268 . + . ID=gene-C9F09_10005;Name=C9F09_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10005;partial=true;start_range=.,1 PYKB01000666.1 Protein Homology CDS 1 268 . + 1 ID=cds-TGC94094.1;Parent=gene-C9F09_10005;Dbxref=NCBI_GP:TGC94094.1;Name=TGC94094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454811.1;locus_tag=C9F09_10005;partial=true;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=TGC94094.1;start_range=.,1;transl_table=11 PYKB01000666.1 Genbank gene 350 694 . + . ID=gene-C9F09_10010;Name=C9F09_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10010 PYKB01000666.1 Protein Homology CDS 350 694 . + 0 ID=cds-TGC94095.1;Parent=gene-C9F09_10010;Dbxref=NCBI_GP:TGC94095.1;Name=TGC94095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=C9F09_10010;product=iron-sulfur cluster insertion protein ErpA;protein_id=TGC94095.1;transl_table=11 PYKB01000666.1 Genbank pseudogene 795 1046 . - . ID=gene-C9F09_10015;Name=C9F09_10015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10015;pseudo=true PYKB01000666.1 Protein Homology CDS 795 1046 . - 0 ID=cds-C9F09_10015;Parent=gene-C9F09_10015;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454813.1;locus_tag=C9F09_10015;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001452.1 1 1137 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001452.1 Genbank region 1 1137 . + . ID=PYKB01001452.1:1..1137;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001452.1 Genbank gene 1 969 . + . ID=gene-C9F09_25250;Name=C9F09_25250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25250;partial=true;start_range=.,1 PYKB01001452.1 Protein Homology CDS 1 969 . + 0 ID=cds-TGC78212.1;Parent=gene-C9F09_25250;Dbxref=NCBI_GP:TGC78212.1;Name=TGC78212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455820.1;locus_tag=C9F09_25250;partial=true;product=transcriptional regulator TyrR;protein_id=TGC78212.1;start_range=.,1;transl_table=11 PYKB01001452.1 Genbank gene 1059 1137 . - . ID=gene-C9F09_25255;Name=tpx;end_range=1137,.;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=C9F09_25255;partial=true PYKB01001452.1 Protein Homology CDS 1059 1137 . - 1 ID=cds-TGC78213.1;Parent=gene-C9F09_25255;Dbxref=NCBI_GP:TGC78213.1;Name=TGC78213.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;end_range=1137,.;gbkey=CDS;gene=tpx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455822.1;locus_tag=C9F09_25255;partial=true;product=lipid hydroperoxide peroxidase;protein_id=TGC78213.1;transl_table=11 ##sequence-region PYKB01001502.1 1 1135 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001502.1 Genbank region 1 1135 . + . ID=PYKB01001502.1:1..1135;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001502.1 Genbank pseudogene 466 1080 . + . ID=gene-C9F09_26080;Name=C9F09_26080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_26080;pseudo=true PYKB01001502.1 Protein Homology CDS 466 1080 . + 0 ID=cds-C9F09_26080;Parent=gene-C9F09_26080;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=C9F09_26080;product=iron ABC transporter permease;pseudo=true;transl_table=11 ##sequence-region PYKB01001254.1 1 1135 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001254.1 Genbank region 1 1135 . + . ID=PYKB01001254.1:1..1135;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001254.1 Genbank gene 129 449 . + . ID=gene-C9F09_21445;Name=C9F09_21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21445 PYKB01001254.1 Protein Homology CDS 129 449 . + 0 ID=cds-TGC82319.1;Parent=gene-C9F09_21445;Dbxref=NCBI_GP:TGC82319.1;Name=TGC82319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=C9F09_21445;product=prepilin peptidase dependent protein C;protein_id=TGC82319.1;transl_table=11 PYKB01001254.1 Genbank gene 465 1135 . + . ID=gene-C9F09_21450;Name=recC;end_range=1135,.;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=C9F09_21450;partial=true PYKB01001254.1 Protein Homology CDS 465 1135 . + 0 ID=cds-TGC82320.1;Parent=gene-C9F09_21450;Dbxref=NCBI_GP:TGC82320.1;Name=TGC82320.1;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination;end_range=1135,.;gbkey=CDS;gene=recC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457389.1;locus_tag=C9F09_21450;partial=true;product=exonuclease V subunit gamma;protein_id=TGC82320.1;transl_table=11 ##sequence-region PYKB01000989.1 1 7575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000989.1 Genbank region 1 7575 . + . ID=PYKB01000989.1:1..7575;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000989.1 Genbank gene 152 586 . + . ID=gene-C9F09_16460;Name=C9F09_16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16460 PYKB01000989.1 Protein Homology CDS 152 586 . + 0 ID=cds-TGC88375.1;Parent=gene-C9F09_16460;Dbxref=NCBI_GP:TGC88375.1;Name=TGC88375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778467.1;locus_tag=C9F09_16460;product=DUF2570 domain-containing protein;protein_id=TGC88375.1;transl_table=11 PYKB01000989.1 Genbank gene 743 1249 . + . ID=gene-C9F09_16465;Name=C9F09_16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16465 PYKB01000989.1 GeneMarkS+ CDS 743 1249 . + 0 ID=cds-TGC88376.1;Parent=gene-C9F09_16465;Dbxref=NCBI_GP:TGC88376.1;Name=TGC88376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_16465;product=hypothetical protein;protein_id=TGC88376.1;transl_table=11 PYKB01000989.1 Genbank gene 1296 1646 . + . ID=gene-C9F09_16470;Name=C9F09_16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16470 PYKB01000989.1 Protein Homology CDS 1296 1646 . + 0 ID=cds-TGC88377.1;Parent=gene-C9F09_16470;Dbxref=NCBI_GP:TGC88377.1;Name=TGC88377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411641.1;locus_tag=C9F09_16470;product=HNH endonuclease;protein_id=TGC88377.1;transl_table=11 PYKB01000989.1 Genbank gene 1762 2265 . + . ID=gene-C9F09_16475;Name=C9F09_16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16475 PYKB01000989.1 Protein Homology CDS 1762 2265 . + 0 ID=cds-TGC88378.1;Parent=gene-C9F09_16475;Dbxref=NCBI_GP:TGC88378.1;Name=TGC88378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411642.1;locus_tag=C9F09_16475;product=phage terminase small subunit P27 family;protein_id=TGC88378.1;transl_table=11 PYKB01000989.1 Genbank gene 2262 3995 . + . ID=gene-C9F09_16480;Name=C9F09_16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16480 PYKB01000989.1 Protein Homology CDS 2262 3995 . + 0 ID=cds-TGC88379.1;Parent=gene-C9F09_16480;Dbxref=NCBI_GP:TGC88379.1;Name=TGC88379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411643.1;locus_tag=C9F09_16480;product=terminase large subunit;protein_id=TGC88379.1;transl_table=11 PYKB01000989.1 Genbank gene 4007 4189 . + . ID=gene-C9F09_16485;Name=C9F09_16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16485 PYKB01000989.1 Protein Homology CDS 4007 4189 . + 0 ID=cds-TGC88380.1;Parent=gene-C9F09_16485;Dbxref=NCBI_GP:TGC88380.1;Name=TGC88380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415668.1;locus_tag=C9F09_16485;product=hypothetical protein;protein_id=TGC88380.1;transl_table=11 PYKB01000989.1 Genbank gene 4189 5430 . + . ID=gene-C9F09_16490;Name=C9F09_16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16490 PYKB01000989.1 Protein Homology CDS 4189 5430 . + 0 ID=cds-TGC88381.1;Parent=gene-C9F09_16490;Dbxref=NCBI_GP:TGC88381.1;Name=TGC88381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411645.1;locus_tag=C9F09_16490;product=phage portal protein;protein_id=TGC88381.1;transl_table=11 PYKB01000989.1 Genbank gene 5372 6058 . + . ID=gene-C9F09_16495;Name=C9F09_16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16495 PYKB01000989.1 Protein Homology CDS 5372 6058 . + 0 ID=cds-TGC88382.1;Parent=gene-C9F09_16495;Dbxref=NCBI_GP:TGC88382.1;Name=TGC88382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411646.1;locus_tag=C9F09_16495;product=HK97 family phage prohead protease;protein_id=TGC88382.1;transl_table=11 PYKB01000989.1 Genbank gene 6073 7278 . + . ID=gene-C9F09_16500;Name=C9F09_16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16500 PYKB01000989.1 Protein Homology CDS 6073 7278 . + 0 ID=cds-TGC88383.1;Parent=gene-C9F09_16500;Dbxref=NCBI_GP:TGC88383.1;Name=TGC88383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411647.1;locus_tag=C9F09_16500;product=phage major capsid protein;protein_id=TGC88383.1;transl_table=11 PYKB01000989.1 Genbank gene 7329 7541 . + . ID=gene-C9F09_16505;Name=C9F09_16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16505 PYKB01000989.1 Protein Homology CDS 7329 7541 . + 0 ID=cds-TGC88384.1;Parent=gene-C9F09_16505;Dbxref=NCBI_GP:TGC88384.1;Name=TGC88384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411648.1;locus_tag=C9F09_16505;product=hypothetical protein;protein_id=TGC88384.1;transl_table=11 ##sequence-region PYKB01000897.1 1 1133 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000897.1 Genbank region 1 1133 . + . ID=PYKB01000897.1:1..1133;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000897.1 Genbank pseudogene 90 224 . + . ID=gene-C9F09_14785;Name=C9F09_14785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_14785;pseudo=true PYKB01000897.1 Protein Homology CDS 90 224 . + 0 ID=cds-C9F09_14785;Parent=gene-C9F09_14785;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455588.1;locus_tag=C9F09_14785;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000897.1 Genbank gene 241 582 . + . ID=gene-C9F09_14790;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=C9F09_14790 PYKB01000897.1 Protein Homology CDS 241 582 . + 0 ID=cds-TGC90236.1;Parent=gene-C9F09_14790;Dbxref=NCBI_GP:TGC90236.1;Name=TGC90236.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455587.1;locus_tag=C9F09_14790;product=type III secretion system chaperone SigE;protein_id=TGC90236.1;transl_table=11 PYKB01000897.1 Genbank gene 573 911 . - . ID=gene-C9F09_14795;Name=C9F09_14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14795 PYKB01000897.1 Protein Homology CDS 573 911 . - 0 ID=cds-TGC90237.1;Parent=gene-C9F09_14795;Dbxref=NCBI_GP:TGC90237.1;Name=TGC90237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=C9F09_14795;product=hypothetical protein;protein_id=TGC90237.1;transl_table=11 ##sequence-region PYKB01000037.1 1 1131 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000037.1 Genbank region 1 1131 . + . ID=PYKB01000037.1:1..1131;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000037.1 Genbank gene 1 298 . - . ID=gene-C9F09_00445;Name=C9F09_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00445;partial=true;start_range=.,1 PYKB01000037.1 Protein Homology CDS 1 298 . - 0 ID=cds-TGD06727.1;Parent=gene-C9F09_00445;Dbxref=NCBI_GP:TGD06727.1;Name=TGD06727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457969.1;locus_tag=C9F09_00445;partial=true;product=hypothetical protein;protein_id=TGD06727.1;start_range=.,1;transl_table=11 PYKB01000037.1 Genbank gene 399 995 . + . ID=gene-C9F09_00450;Name=C9F09_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00450 PYKB01000037.1 Protein Homology CDS 399 995 . + 0 ID=cds-TGD06728.1;Parent=gene-C9F09_00450;Dbxref=NCBI_GP:TGD06728.1;Name=TGD06728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457970.1;locus_tag=C9F09_00450;product=DUF1454 domain-containing protein;protein_id=TGD06728.1;transl_table=11 ##sequence-region PYKB01000628.1 1 1130 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000628.1 Genbank region 1 1130 . + . ID=PYKB01000628.1:1..1130;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000628.1 Genbank gene 1 246 . - . ID=gene-C9F09_09315;Name=C9F09_09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09315;partial=true;start_range=.,1 PYKB01000628.1 Protein Homology CDS 1 246 . - 0 ID=cds-TGC94787.1;Parent=gene-C9F09_09315;Dbxref=NCBI_GP:TGC94787.1;Name=TGC94787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=C9F09_09315;partial=true;product=IS3 family transposase;protein_id=TGC94787.1;start_range=.,1;transl_table=11 PYKB01000628.1 Genbank gene 664 1130 . + . ID=gene-C9F09_09320;Name=C9F09_09320;end_range=1130,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09320;partial=true PYKB01000628.1 Protein Homology CDS 664 1130 . + 0 ID=cds-TGC94786.1;Parent=gene-C9F09_09320;Dbxref=NCBI_GP:TGC94786.1;Name=TGC94786.1;end_range=1130,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14279.4;locus_tag=C9F09_09320;partial=true;product=hypothetical protein;protein_id=TGC94786.1;transl_table=11 ##sequence-region PYKB01000173.1 1 1128 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000173.1 Genbank region 1 1128 . + . ID=PYKB01000173.1:1..1128;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000173.1 Genbank gene 1 545 . + . ID=gene-C9F09_01955;Name=C9F09_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01955;partial=true;start_range=.,1 PYKB01000173.1 Protein Homology CDS 1 545 . + 2 ID=cds-TGD04000.1;Parent=gene-C9F09_01955;Dbxref=NCBI_GP:TGD04000.1;Name=TGD04000.1;Note=catalyzes the hydrolysis of 1%2C4-beta-D-glucosidic linkages in cellulose%2C lichenin and cereal beta-D-glucans;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=C9F09_01955;partial=true;product=endo-1%2C4-D-glucanase;protein_id=TGD04000.1;start_range=.,1;transl_table=11 PYKB01000173.1 Genbank gene 527 1128 . + . ID=gene-C9F09_01960;Name=C9F09_01960;end_range=1128,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01960;partial=true PYKB01000173.1 Protein Homology CDS 527 1128 . + 0 ID=cds-TGD04001.1;Parent=gene-C9F09_01960;Dbxref=NCBI_GP:TGD04001.1;Name=TGD04001.1;end_range=1128,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=C9F09_01960;partial=true;product=cellulose biosynthesis protein BcsC;protein_id=TGD04001.1;transl_table=11 ##sequence-region PYKB01001210.1 1 1128 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001210.1 Genbank region 1 1128 . + . ID=PYKB01001210.1:1..1128;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001210.1 Genbank gene 1 1068 . + . ID=gene-C9F09_20605;Name=C9F09_20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20605;partial=true;start_range=.,1 PYKB01001210.1 Protein Homology CDS 1 1068 . + 0 ID=cds-TGC83346.1;Parent=gene-C9F09_20605;Dbxref=NCBI_GP:TGC83346.1;Name=TGC83346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=C9F09_20605;partial=true;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=TGC83346.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001019.1 1 1127 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001019.1 Genbank region 1 1127 . + . ID=PYKB01001019.1:1..1127;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001019.1 Genbank gene 50 1127 . + . ID=gene-C9F09_17045;Name=C9F09_17045;end_range=1127,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17045;partial=true PYKB01001019.1 Protein Homology CDS 50 1127 . + 0 ID=cds-TGC87817.1;Parent=gene-C9F09_17045;Dbxref=NCBI_GP:TGC87817.1;Name=TGC87817.1;end_range=1127,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405851.1;locus_tag=C9F09_17045;partial=true;product=multidrug transporter;protein_id=TGC87817.1;transl_table=11 ##sequence-region PYKB01000381.1 1 1124 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000381.1 Genbank region 1 1124 . + . ID=PYKB01000381.1:1..1124;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000381.1 Genbank gene 1 765 . + . ID=gene-C9F09_04325;Name=C9F09_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04325;partial=true;start_range=.,1 PYKB01000381.1 Protein Homology CDS 1 765 . + 0 ID=cds-TGC99971.1;Parent=gene-C9F09_04325;Dbxref=NCBI_GP:TGC99971.1;Name=TGC99971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=C9F09_04325;partial=true;product=hypothetical protein;protein_id=TGC99971.1;start_range=.,1;transl_table=11 PYKB01000381.1 Genbank gene 765 956 . + . ID=gene-C9F09_04330;Name=C9F09_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04330 PYKB01000381.1 Protein Homology CDS 765 956 . + 0 ID=cds-TGC99972.1;Parent=gene-C9F09_04330;Dbxref=NCBI_GP:TGC99972.1;Name=TGC99972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455859.1;locus_tag=C9F09_04330;product=YnbE family lipoprotein;protein_id=TGC99972.1;transl_table=11 PYKB01000381.1 Genbank pseudogene 964 1062 . + . ID=gene-C9F09_04335;Name=C9F09_04335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04335;pseudo=true PYKB01000381.1 Protein Homology CDS 964 1062 . + 0 ID=cds-C9F09_04335;Parent=gene-C9F09_04335;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455860.1;locus_tag=C9F09_04335;product=DUF1318 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000375.1 1 1123 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000375.1 Genbank region 1 1123 . + . ID=PYKB01000375.1:1..1123;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000375.1 Genbank gene 1 1123 . - . ID=gene-C9F09_04275;Name=C9F09_04275;end_range=1123,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04275;partial=true;start_range=.,1 PYKB01000375.1 Protein Homology CDS 1 1123 . - 1 ID=cds-TGD00050.1;Parent=gene-C9F09_04275;Dbxref=NCBI_GP:TGD00050.1;Name=TGD00050.1;end_range=1123,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463280.1;locus_tag=C9F09_04275;partial=true;product=MFS transporter;protein_id=TGD00050.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001172.1 1 1118 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001172.1 Genbank region 1 1118 . + . ID=PYKB01001172.1:1..1118;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001172.1 Genbank gene 1 601 . + . ID=gene-C9F09_19790;Name=C9F09_19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19790;partial=true;start_range=.,1 PYKB01001172.1 Protein Homology CDS 1 601 . + 1 ID=cds-TGC84170.1;Parent=gene-C9F09_19790;Dbxref=NCBI_GP:TGC84170.1;Name=TGC84170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456283.1;locus_tag=C9F09_19790;partial=true;product=hypothetical protein;protein_id=TGC84170.1;start_range=.,1;transl_table=11 PYKB01001172.1 Genbank gene 639 1118 . + . ID=gene-C9F09_19795;Name=C9F09_19795;end_range=1118,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19795;partial=true PYKB01001172.1 Protein Homology CDS 639 1118 . + 0 ID=cds-TGC84171.1;Parent=gene-C9F09_19795;Dbxref=NCBI_GP:TGC84171.1;Name=TGC84171.1;end_range=1118,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456282.1;locus_tag=C9F09_19795;partial=true;product=3-deoxy-8-phosphooctulonate synthase;protein_id=TGC84171.1;transl_table=11 ##sequence-region PYKB01000588.1 1 1118 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000588.1 Genbank region 1 1118 . + . ID=PYKB01000588.1:1..1118;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000588.1 Genbank gene 1 1118 . + . ID=gene-C9F09_08515;Name=C9F09_08515;end_range=1118,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08515;partial=true;start_range=.,1 PYKB01000588.1 Protein Homology CDS 1 1118 . + 2 ID=cds-TGC95644.1;Parent=gene-C9F09_08515;Dbxref=NCBI_GP:TGC95644.1;Name=TGC95644.1;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;end_range=1118,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459163.1;locus_tag=C9F09_08515;partial=true;product=aconitate hydratase B;protein_id=TGC95644.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001688.1 1 7541 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001688.1 Genbank region 1 7541 . + . ID=PYKB01001688.1:1..7541;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001688.1 Genbank pseudogene 1 364 . + . ID=gene-C9F09_29410;Name=C9F09_29410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29410;pseudo=true PYKB01001688.1 Protein Homology CDS 1 364 . + 1 ID=cds-C9F09_29410;Parent=gene-C9F09_29410;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=C9F09_29410;product=efflux transporter periplasmic adaptor subunit;pseudo=true;transl_table=11 PYKB01001688.1 Genbank gene 361 3528 . + . ID=gene-C9F09_29415;Name=C9F09_29415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29415 PYKB01001688.1 Protein Homology CDS 361 3528 . + 0 ID=cds-TGC72465.1;Parent=gene-C9F09_29415;Dbxref=NCBI_GP:TGC72465.1;Name=TGC72465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=C9F09_29415;product=multidrug efflux RND transporter permease subunit;protein_id=TGC72465.1;transl_table=11 PYKB01001688.1 Genbank gene 3491 5002 . + . ID=gene-C9F09_29420;Name=C9F09_29420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29420 PYKB01001688.1 Protein Homology CDS 3491 5002 . + 0 ID=cds-TGC72466.1;Parent=gene-C9F09_29420;Dbxref=NCBI_GP:TGC72466.1;Name=TGC72466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459345.3;locus_tag=C9F09_29420;product=multidrug transporter;protein_id=TGC72466.1;transl_table=11 PYKB01001688.1 Genbank gene 5072 5431 . - . ID=gene-C9F09_29425;Name=C9F09_29425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29425 PYKB01001688.1 Protein Homology CDS 5072 5431 . - 0 ID=cds-TGC72467.1;Parent=gene-C9F09_29425;Dbxref=NCBI_GP:TGC72467.1;Name=TGC72467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=C9F09_29425;product=DUF4156 domain-containing protein;protein_id=TGC72467.1;transl_table=11 PYKB01001688.1 Genbank gene 5489 5713 . - . ID=gene-C9F09_29430;Name=C9F09_29430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29430 PYKB01001688.1 Protein Homology CDS 5489 5713 . - 0 ID=cds-TGC72468.1;Parent=gene-C9F09_29430;Dbxref=NCBI_GP:TGC72468.1;Name=TGC72468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=C9F09_29430;product=hypothetical protein;protein_id=TGC72468.1;transl_table=11 PYKB01001688.1 Genbank gene 5724 5846 . - . ID=gene-C9F09_29435;Name=C9F09_29435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29435 PYKB01001688.1 Protein Homology CDS 5724 5846 . - 0 ID=cds-TGC72470.1;Parent=gene-C9F09_29435;Dbxref=NCBI_GP:TGC72470.1;Name=TGC72470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001577315.1;locus_tag=C9F09_29435;product=transcriptional regulator;protein_id=TGC72470.1;transl_table=11 PYKB01001688.1 Genbank pseudogene 5904 6365 . - . ID=gene-C9F09_29440;Name=C9F09_29440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29440;pseudo=true PYKB01001688.1 Protein Homology CDS 5904 6365 . - 0 ID=cds-C9F09_29440;Parent=gene-C9F09_29440;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000610825.1;locus_tag=C9F09_29440;product=transcriptional regulator;pseudo=true;transl_table=11 PYKB01001688.1 Genbank gene 6509 7033 . - . ID=gene-C9F09_29445;Name=C9F09_29445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29445 PYKB01001688.1 Protein Homology CDS 6509 7033 . - 0 ID=cds-TGC72469.1;Parent=gene-C9F09_29445;Dbxref=NCBI_GP:TGC72469.1;Name=TGC72469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=C9F09_29445;product=outer membrane protein;protein_id=TGC72469.1;transl_table=11 ##sequence-region PYKB01000719.1 1 1117 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000719.1 Genbank region 1 1117 . + . ID=PYKB01000719.1:1..1117;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000719.1 Genbank gene 1 152 . + . ID=gene-C9F09_11000;Name=C9F09_11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11000;partial=true;start_range=.,1 PYKB01000719.1 Protein Homology CDS 1 152 . + 2 ID=cds-TGC93456.1;Parent=gene-C9F09_11000;Dbxref=NCBI_GP:TGC93456.1;Name=TGC93456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525057.1;locus_tag=C9F09_11000;partial=true;product=ribonuclease D;protein_id=TGC93456.1;start_range=.,1;transl_table=11 PYKB01000719.1 Genbank gene 273 539 . - . ID=gene-C9F09_11005;Name=C9F09_11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11005 PYKB01000719.1 Protein Homology CDS 273 539 . - 0 ID=cds-TGC93457.1;Parent=gene-C9F09_11005;Dbxref=NCBI_GP:TGC93457.1;Name=TGC93457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456323.1;locus_tag=C9F09_11005;product=cell division topological specificity factor;protein_id=TGC93457.1;transl_table=11 PYKB01000719.1 Genbank gene 543 1117 . - . ID=gene-C9F09_11010;Name=C9F09_11010;end_range=1117,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11010;partial=true PYKB01000719.1 Protein Homology CDS 543 1117 . - 2 ID=cds-TGC93458.1;Parent=gene-C9F09_11010;Dbxref=NCBI_GP:TGC93458.1;Name=TGC93458.1;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;end_range=1117,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=C9F09_11010;partial=true;product=septum site-determining protein MinD;protein_id=TGC93458.1;transl_table=11 ##sequence-region PYKB01001335.1 1 1114 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001335.1 Genbank region 1 1114 . + . ID=PYKB01001335.1:1..1114;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001335.1 Genbank gene 1 1114 . + . ID=gene-C9F09_22955;Name=C9F09_22955;end_range=1114,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22955;partial=true;start_range=.,1 PYKB01001335.1 Protein Homology CDS 1 1114 . + 0 ID=cds-TGC80847.1;Parent=gene-C9F09_22955;Dbxref=NCBI_GP:TGC80847.1;Name=TGC80847.1;Note=involved in fimbria production;end_range=1114,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=C9F09_22955;partial=true;product=outer membrane usher protein;protein_id=TGC80847.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001174.1 1 1111 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001174.1 Genbank region 1 1111 . + . ID=PYKB01001174.1:1..1111;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001174.1 Genbank gene 1 272 . - . ID=gene-C9F09_19810;Name=C9F09_19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19810;partial=true;start_range=.,1 PYKB01001174.1 Protein Homology CDS 1 272 . - 0 ID=cds-TGC84160.1;Parent=gene-C9F09_19810;Dbxref=NCBI_GP:TGC84160.1;Name=TGC84160.1;Note=catalyzes the conversion of cob(I)yrinic acid a%2Cc-diamide to adenosylcob(III)yrinic acid a%2Cc-diamide;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=C9F09_19810;partial=true;product=cobalamin adenosyltransferase;protein_id=TGC84160.1;start_range=.,1;transl_table=11 PYKB01001174.1 Genbank gene 269 958 . - . ID=gene-C9F09_19815;Name=C9F09_19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19815 PYKB01001174.1 Protein Homology CDS 269 958 . - 0 ID=cds-TGC84161.1;Parent=gene-C9F09_19815;Dbxref=NCBI_GP:TGC84161.1;Name=TGC84161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=C9F09_19815;product=ethanolamine utilization acetate kinase EutQ;protein_id=TGC84161.1;transl_table=11 PYKB01001174.1 Genbank gene 936 1111 . - . ID=gene-C9F09_19820;Name=C9F09_19820;end_range=1111,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19820;partial=true PYKB01001174.1 Protein Homology CDS 936 1111 . - 2 ID=cds-TGC84162.1;Parent=gene-C9F09_19820;Dbxref=NCBI_GP:TGC84162.1;Name=TGC84162.1;end_range=1111,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457003.1;locus_tag=C9F09_19820;partial=true;product=ethanolamine utilization protein EutP;protein_id=TGC84162.1;transl_table=11 ##sequence-region PYKB01000074.1 1 1108 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000074.1 Genbank region 1 1108 . + . ID=PYKB01000074.1:1..1108;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000074.1 Genbank gene 1 529 . - . ID=gene-C9F09_00875;Name=C9F09_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00875;partial=true;start_range=.,1 PYKB01000074.1 Protein Homology CDS 1 529 . - 0 ID=cds-TGD06018.1;Parent=gene-C9F09_00875;Dbxref=NCBI_GP:TGD06018.1;Name=TGD06018.1;Note=Catalyzes the conversion of citrate to isocitrate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455785.1;locus_tag=C9F09_00875;partial=true;product=aconitate hydratase;protein_id=TGD06018.1;start_range=.,1;transl_table=11 PYKB01000074.1 Genbank gene 914 1084 . - . ID=gene-C9F09_00880;Name=C9F09_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00880 PYKB01000074.1 Protein Homology CDS 914 1084 . - 0 ID=cds-TGD06019.1;Parent=gene-C9F09_00880;Dbxref=NCBI_GP:TGD06019.1;Name=TGD06019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991982.1;locus_tag=C9F09_00880;product=hypothetical protein;protein_id=TGD06019.1;transl_table=11 ##sequence-region PYKB01000629.1 1 1108 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000629.1 Genbank region 1 1108 . + . ID=PYKB01000629.1:1..1108;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000629.1 Genbank gene 1 259 . - . ID=gene-C9F09_09325;Name=C9F09_09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09325;partial=true;start_range=.,1 PYKB01000629.1 Protein Homology CDS 1 259 . - 0 ID=cds-TGC94783.1;Parent=gene-C9F09_09325;Dbxref=NCBI_GP:TGC94783.1;Name=TGC94783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458504.1;locus_tag=C9F09_09325;partial=true;product=isocitrate lyase;protein_id=TGC94783.1;start_range=.,1;transl_table=11 PYKB01000629.1 Genbank pseudogene 291 1108 . - . ID=gene-C9F09_09330;Name=C9F09_09330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_09330;pseudo=true PYKB01000629.1 Protein Homology CDS 291 1108 . - 2 ID=cds-C9F09_09330;Parent=gene-C9F09_09330;Note=Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458503.1;locus_tag=C9F09_09330;product=malate synthase A;pseudo=true;transl_table=11 ##sequence-region PYKB01001711.1 1 1108 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001711.1 Genbank region 1 1108 . + . ID=PYKB01001711.1:1..1108;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001711.1 Genbank gene 1 385 . + . ID=gene-C9F09_29915;Name=C9F09_29915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29915;partial=true;start_range=.,1 PYKB01001711.1 Protein Homology CDS 1 385 . + 1 ID=cds-TGC71734.1;Parent=gene-C9F09_29915;Dbxref=NCBI_GP:TGC71734.1;Name=TGC71734.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457747.1;locus_tag=C9F09_29915;partial=true;product=septum formation inhibitor Maf;protein_id=TGC71734.1;start_range=.,1;transl_table=11 PYKB01001711.1 Genbank pseudogene 375 1037 . + . ID=gene-C9F09_29920;Name=C9F09_29920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29920;pseudo=true PYKB01001711.1 Protein Homology CDS 375 1037 . + 0 ID=cds-C9F09_29920;Parent=gene-C9F09_29920;Note=involved in the processing of the 5'end of 16S rRNA%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457746.1;locus_tag=C9F09_29920;product=Rne/Rng family ribonuclease;pseudo=true;transl_table=11 ##sequence-region PYKB01001535.1 1 1105 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001535.1 Genbank region 1 1105 . + . ID=PYKB01001535.1:1..1105;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001535.1 Genbank gene 1 143 . - . ID=gene-C9F09_26720;Name=C9F09_26720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26720;partial=true;start_range=.,1 PYKB01001535.1 Protein Homology CDS 1 143 . - 0 ID=cds-TGC76395.1;Parent=gene-C9F09_26720;Dbxref=NCBI_GP:TGC76395.1;Name=TGC76395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=C9F09_26720;partial=true;product=fimbrial protein;protein_id=TGC76395.1;start_range=.,1;transl_table=11 PYKB01001535.1 Genbank gene 144 1064 . - . ID=gene-C9F09_26725;Name=C9F09_26725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26725 PYKB01001535.1 Protein Homology CDS 144 1064 . - 0 ID=cds-TGC76396.1;Parent=gene-C9F09_26725;Dbxref=NCBI_GP:TGC76396.1;Name=TGC76396.1;Note=involved in the regulation of length and mediates adhesion;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001615322.1;locus_tag=C9F09_26725;product=fimbrial protein;protein_id=TGC76396.1;transl_table=11 ##sequence-region PYKB01000379.1 1 1103 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000379.1 Genbank region 1 1103 . + . ID=PYKB01000379.1:1..1103;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000379.1 Genbank gene 1 312 . + . ID=gene-C9F09_04300;Name=C9F09_04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04300;partial=true;start_range=.,1 PYKB01000379.1 Protein Homology CDS 1 312 . + 0 ID=cds-TGC99995.1;Parent=gene-C9F09_04300;Dbxref=NCBI_GP:TGC99995.1;Name=TGC99995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454656.1;locus_tag=C9F09_04300;partial=true;product=hypothetical protein;protein_id=TGC99995.1;start_range=.,1;transl_table=11 PYKB01000379.1 Genbank gene 357 1103 . + . ID=gene-C9F09_04305;Name=C9F09_04305;end_range=1103,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04305;partial=true PYKB01000379.1 Protein Homology CDS 357 1103 . + 0 ID=cds-TGC99996.1;Parent=gene-C9F09_04305;Dbxref=NCBI_GP:TGC99996.1;Name=TGC99996.1;end_range=1103,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=C9F09_04305;partial=true;product=isoleucine--tRNA ligase;protein_id=TGC99996.1;transl_table=11 ##sequence-region PYKB01001500.1 1 1102 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001500.1 Genbank region 1 1102 . + . ID=PYKB01001500.1:1..1102;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001500.1 Genbank gene 1 496 . + . ID=gene-C9F09_26050;Name=C9F09_26050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26050;partial=true;start_range=.,1 PYKB01001500.1 Protein Homology CDS 1 496 . + 1 ID=cds-TGC77227.1;Parent=gene-C9F09_26050;Dbxref=NCBI_GP:TGC77227.1;Name=TGC77227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456910.1;locus_tag=C9F09_26050;partial=true;product=hypothetical protein;protein_id=TGC77227.1;start_range=.,1;transl_table=11 PYKB01001500.1 Genbank gene 545 1102 . + . ID=gene-C9F09_26055;Name=C9F09_26055;end_range=1102,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26055;partial=true PYKB01001500.1 Protein Homology CDS 545 1102 . + 0 ID=cds-TGC77228.1;Parent=gene-C9F09_26055;Dbxref=NCBI_GP:TGC77228.1;Name=TGC77228.1;end_range=1102,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456909.1;locus_tag=C9F09_26055;partial=true;product=DedA family protein;protein_id=TGC77228.1;transl_table=11 ##sequence-region PYKB01001570.1 1 1090 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001570.1 Genbank region 1 1090 . + . ID=PYKB01001570.1:1..1090;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001570.1 Genbank gene 1 421 . - . ID=gene-C9F09_27400;Name=C9F09_27400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27400;partial=true;start_range=.,1 PYKB01001570.1 Protein Homology CDS 1 421 . - 0 ID=cds-TGC75547.1;Parent=gene-C9F09_27400;Dbxref=NCBI_GP:TGC75547.1;Name=TGC75547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416368.1;locus_tag=C9F09_27400;partial=true;product=pyruvate kinase;protein_id=TGC75547.1;start_range=.,1;transl_table=11 PYKB01001570.1 Genbank gene 545 1090 . - . ID=gene-C9F09_27405;Name=C9F09_27405;end_range=1090,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27405;partial=true PYKB01001570.1 Protein Homology CDS 545 1090 . - 0 ID=cds-TGC75548.1;Parent=gene-C9F09_27405;Dbxref=NCBI_GP:TGC75548.1;Name=TGC75548.1;Note=Represses the expression of the zwf%2C eda%2C glp and gap;end_range=1090,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456454.1;locus_tag=C9F09_27405;partial=true;product=transcriptional regulator HexR;protein_id=TGC75548.1;transl_table=11 ##sequence-region PYKB01000869.1 1 7540 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000869.1 Genbank region 1 7540 . + . ID=PYKB01000869.1:1..7540;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000869.1 Genbank gene 1 120 . - . ID=gene-C9F09_14085;Name=C9F09_14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14085;partial=true;start_range=.,1 PYKB01000869.1 Protein Homology CDS 1 120 . - 0 ID=cds-TGC90826.1;Parent=gene-C9F09_14085;Dbxref=NCBI_GP:TGC90826.1;Name=TGC90826.1;Note=with GltJLPS and GadC for glutamate and GltJLP%2C DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272794.1;locus_tag=C9F09_14085;partial=true;product=amino acid ABC transporter permease;protein_id=TGC90826.1;start_range=.,1;transl_table=11 PYKB01000869.1 Genbank gene 120 860 . - . ID=gene-C9F09_14090;Name=C9F09_14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14090 PYKB01000869.1 Protein Homology CDS 120 860 . - 0 ID=cds-TGC90827.1;Parent=gene-C9F09_14090;Dbxref=NCBI_GP:TGC90827.1;Name=TGC90827.1;Note=with GltIKL is involved in the transport of glutamate and aspartate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455233.1;locus_tag=C9F09_14090;product=amino acid ABC transporter permease;protein_id=TGC90827.1;transl_table=11 PYKB01000869.1 Genbank gene 1020 1946 . - . ID=gene-C9F09_14095;Name=C9F09_14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14095 PYKB01000869.1 Protein Homology CDS 1020 1946 . - 0 ID=cds-TGC90828.1;Parent=gene-C9F09_14095;Dbxref=NCBI_GP:TGC90828.1;Name=TGC90828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459657.1;locus_tag=C9F09_14095;product=glutamate/aspartate ABC transporter substrate-binding protein;protein_id=TGC90828.1;transl_table=11 PYKB01000869.1 Genbank gene 2283 3821 . - . ID=gene-C9F09_14100;Name=C9F09_14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14100 PYKB01000869.1 Protein Homology CDS 2283 3821 . - 0 ID=cds-TGC90832.1;Parent=gene-C9F09_14100;Dbxref=NCBI_GP:TGC90832.1;Name=TGC90832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=C9F09_14100;product=apolipoprotein N-acyltransferase;protein_id=TGC90832.1;transl_table=11 PYKB01000869.1 Genbank gene 3841 4719 . - . ID=gene-C9F09_14105;Name=C9F09_14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14105 PYKB01000869.1 Protein Homology CDS 3841 4719 . - 0 ID=cds-TGC90829.1;Parent=gene-C9F09_14105;Dbxref=NCBI_GP:TGC90829.1;Name=TGC90829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455236.1;locus_tag=C9F09_14105;product=magnesium/cobalt transporter CorC;protein_id=TGC90829.1;transl_table=11 PYKB01000869.1 Genbank gene 4877 5350 . - . ID=gene-C9F09_14110;Name=C9F09_14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14110 PYKB01000869.1 Protein Homology CDS 4877 5350 . - 0 ID=cds-TGC90830.1;Parent=gene-C9F09_14110;Dbxref=NCBI_GP:TGC90830.1;Name=TGC90830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455237.1;locus_tag=C9F09_14110;product=endoribonuclease YbeY;protein_id=TGC90830.1;transl_table=11 PYKB01000869.1 Genbank gene 5347 6432 . - . ID=gene-C9F09_14115;Name=C9F09_14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14115 PYKB01000869.1 Protein Homology CDS 5347 6432 . - 0 ID=cds-TGC90831.1;Parent=gene-C9F09_14115;Dbxref=NCBI_GP:TGC90831.1;Name=TGC90831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455238.1;locus_tag=C9F09_14115;product=nucleoside triphosphate hydrolase;protein_id=TGC90831.1;transl_table=11 PYKB01000869.1 Genbank gene 6598 7540 . - . ID=gene-C9F09_14120;Name=C9F09_14120;end_range=7540,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14120;partial=true PYKB01000869.1 Protein Homology CDS 6598 7540 . - 1 ID=cds-TGC90833.1;Parent=gene-C9F09_14120;Dbxref=NCBI_GP:TGC90833.1;Name=TGC90833.1;end_range=7540,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=C9F09_14120;partial=true;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=TGC90833.1;transl_table=11 ##sequence-region PYKB01001687.1 1 1089 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001687.1 Genbank region 1 1089 . + . ID=PYKB01001687.1:1..1089;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001687.1 Genbank gene 66 551 . + . ID=gene-C9F09_29400;Name=C9F09_29400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29400 PYKB01001687.1 Protein Homology CDS 66 551 . + 0 ID=cds-TGC72564.1;Parent=gene-C9F09_29400;Dbxref=NCBI_GP:TGC72564.1;Name=TGC72564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=C9F09_29400;product=ATP-independent periplasmic protein-refolding chaperone;protein_id=TGC72564.1;transl_table=11 PYKB01001687.1 Genbank gene 626 1089 . - . ID=gene-C9F09_29405;Name=C9F09_29405;end_range=1089,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29405;partial=true PYKB01001687.1 Protein Homology CDS 626 1089 . - 2 ID=cds-TGC72565.1;Parent=gene-C9F09_29405;Dbxref=NCBI_GP:TGC72565.1;Name=TGC72565.1;Note=3' incision activity%3B acts with UvrC;end_range=1089,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456203.1;locus_tag=C9F09_29405;partial=true;product=endonuclease;protein_id=TGC72565.1;transl_table=11 ##sequence-region PYKB01000988.1 1 1088 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000988.1 Genbank region 1 1088 . + . ID=PYKB01000988.1:1..1088;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000988.1 Genbank gene 1 174 . - . ID=gene-C9F09_16450;Name=C9F09_16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16450;partial=true;start_range=.,1 PYKB01000988.1 Protein Homology CDS 1 174 . - 0 ID=cds-TGC88429.1;Parent=gene-C9F09_16450;Dbxref=NCBI_GP:TGC88429.1;Name=TGC88429.1;Note=regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456810.1;locus_tag=C9F09_16450;partial=true;product=bifunctional transcriptional activator/DNA repair enzyme protein Ada;protein_id=TGC88429.1;start_range=.,1;transl_table=11 PYKB01000988.1 Genbank gene 255 1088 . - . ID=gene-C9F09_16455;Name=C9F09_16455;end_range=1088,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16455;partial=true PYKB01000988.1 Protein Homology CDS 255 1088 . - 0 ID=cds-TGC88428.1;Parent=gene-C9F09_16455;Dbxref=NCBI_GP:TGC88428.1;Name=TGC88428.1;end_range=1088,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456811.1;locus_tag=C9F09_16455;partial=true;product=FAD:protein FMN transferase ApbE;protein_id=TGC88428.1;transl_table=11 ##sequence-region PYKB01000194.1 1 1085 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000194.1 Genbank region 1 1085 . + . ID=PYKB01000194.1:1..1085;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000194.1 Genbank gene 1 222 . + . ID=gene-C9F09_02155;Name=C9F09_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02155;partial=true;start_range=.,1 PYKB01000194.1 Protein Homology CDS 1 222 . + 0 ID=cds-TGD03808.1;Parent=gene-C9F09_02155;Dbxref=NCBI_GP:TGD03808.1;Name=TGD03808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454659.1;locus_tag=C9F09_02155;partial=true;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=TGD03808.1;start_range=.,1;transl_table=11 PYKB01000194.1 Genbank gene 225 1085 . + . ID=gene-C9F09_02160;Name=C9F09_02160;end_range=1085,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02160;partial=true PYKB01000194.1 Protein Homology CDS 225 1085 . + 0 ID=cds-TGD03809.1;Parent=gene-C9F09_02160;Dbxref=NCBI_GP:TGD03809.1;Name=TGD03809.1;end_range=1085,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=C9F09_02160;partial=true;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=TGD03809.1;transl_table=11 ##sequence-region PYKB01000133.1 1 1082 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000133.1 Genbank region 1 1082 . + . ID=PYKB01000133.1:1..1082;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000133.1 Genbank gene 1 411 . + . ID=gene-C9F09_01530;Name=C9F09_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01530;partial=true;start_range=.,1 PYKB01000133.1 Protein Homology CDS 1 411 . + 0 ID=cds-TGD04748.1;Parent=gene-C9F09_01530;Dbxref=NCBI_GP:TGD04748.1;Name=TGD04748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456139.1;locus_tag=C9F09_01530;partial=true;product=DUF1722 domain-containing protein;protein_id=TGD04748.1;start_range=.,1;transl_table=11 PYKB01000133.1 Genbank gene 507 719 . - . ID=gene-C9F09_01535;Name=C9F09_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01535 PYKB01000133.1 Protein Homology CDS 507 719 . - 0 ID=cds-TGD04749.1;Parent=gene-C9F09_01535;Dbxref=NCBI_GP:TGD04749.1;Name=TGD04749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456140.1;locus_tag=C9F09_01535;product=fumarate hydratase FumD;protein_id=TGD04749.1;transl_table=11 PYKB01000133.1 Genbank gene 817 1082 . - . ID=gene-C9F09_01540;Name=ttrR;end_range=1082,.;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=C9F09_01540;partial=true PYKB01000133.1 Protein Homology CDS 817 1082 . - 2 ID=cds-TGD04750.1;Parent=gene-C9F09_01540;Dbxref=NCBI_GP:TGD04750.1;Name=TGD04750.1;end_range=1082,.;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456141.1;locus_tag=C9F09_01540;partial=true;product=two-component system response regulator TtrR;protein_id=TGD04750.1;transl_table=11 ##sequence-region PYKB01001351.1 1 1079 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001351.1 Genbank region 1 1079 . + . ID=PYKB01001351.1:1..1079;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001351.1 Genbank pseudogene 74 466 . - . ID=gene-C9F09_23235;Name=C9F09_23235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23235;pseudo=true PYKB01001351.1 Protein Homology CDS 74 466 . - 0 ID=cds-C9F09_23235;Parent=gene-C9F09_23235;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458384.1;locus_tag=C9F09_23235;product=glycogen phosphorylase;pseudo=true;transl_table=11 PYKB01001351.1 Genbank gene 486 1079 . - . ID=gene-C9F09_23240;Name=glgA;end_range=1079,.;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=C9F09_23240;partial=true PYKB01001351.1 Protein Homology CDS 486 1079 . - 0 ID=cds-TGC80507.1;Parent=gene-C9F09_23240;Dbxref=NCBI_GP:TGC80507.1;Name=TGC80507.1;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;end_range=1079,.;gbkey=CDS;gene=glgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=C9F09_23240;partial=true;product=starch synthase;protein_id=TGC80507.1;transl_table=11 ##sequence-region PYKB01001722.1 1 1078 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001722.1 Genbank region 1 1078 . + . ID=PYKB01001722.1:1..1078;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001722.1 Genbank gene 97 423 . - . ID=gene-C9F09_30185;Name=C9F09_30185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30185 PYKB01001722.1 Protein Homology CDS 97 423 . - 0 ID=cds-TGC71369.1;Parent=gene-C9F09_30185;Dbxref=NCBI_GP:TGC71369.1;Name=TGC71369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455791.1;locus_tag=C9F09_30185;product=stress response translation initiation inhibitor YciH;protein_id=TGC71369.1;transl_table=11 PYKB01001722.1 Genbank pseudogene 423 1028 . - . ID=gene-C9F09_30190;Name=C9F09_30190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_30190;pseudo=true PYKB01001722.1 Protein Homology CDS 423 1028 . - 0 ID=cds-C9F09_30190;Parent=gene-C9F09_30190;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=C9F09_30190;product=orotidine-5'-phosphate decarboxylase;pseudo=true;transl_table=11 ##sequence-region PYKB01000532.1 1 1077 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000532.1 Genbank region 1 1077 . + . ID=PYKB01000532.1:1..1077;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000532.1 Genbank gene 393 1077 . + . ID=gene-C9F09_07250;Name=C9F09_07250;end_range=1077,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07250;partial=true PYKB01000532.1 Protein Homology CDS 393 1077 . + 0 ID=cds-TGC96920.1;Parent=gene-C9F09_07250;Dbxref=NCBI_GP:TGC96920.1;Name=TGC96920.1;end_range=1077,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=C9F09_07250;partial=true;product=HTH-type transcriptional regulator CysB;protein_id=TGC96920.1;transl_table=11 ##sequence-region PYKB01001470.1 1 1075 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001470.1 Genbank region 1 1075 . + . ID=PYKB01001470.1:1..1075;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001470.1 Genbank pseudogene 49 1075 . - . ID=gene-C9F09_25600;Name=narZ;gbkey=Gene;gene=narZ;gene_biotype=pseudogene;locus_tag=C9F09_25600;pseudo=true PYKB01001470.1 Protein Homology CDS 49 1075 . - 1 ID=cds-C9F09_25600;Parent=gene-C9F09_25600;Note=with NarYV catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli%3B expression of nitrate reductase Z is not dependent on nitrate levels%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=narZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=C9F09_25600;product=nitrate reductase subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKB01001370.1 1 1074 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001370.1 Genbank region 1 1074 . + . ID=PYKB01001370.1:1..1074;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001370.1 Genbank gene 1 149 . - . ID=gene-C9F09_23565;Name=C9F09_23565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23565;partial=true;start_range=.,1 PYKB01001370.1 Protein Homology CDS 1 149 . - 0 ID=cds-TGC80175.1;Parent=gene-C9F09_23565;Dbxref=NCBI_GP:TGC80175.1;Name=TGC80175.1;Note=DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=C9F09_23565;partial=true;product=endonuclease III;protein_id=TGC80175.1;start_range=.,1;transl_table=11 PYKB01001370.1 Genbank gene 149 841 . - . ID=gene-C9F09_23570;Name=C9F09_23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23570 PYKB01001370.1 Protein Homology CDS 149 841 . - 0 ID=cds-TGC80176.1;Parent=gene-C9F09_23570;Dbxref=NCBI_GP:TGC80176.1;Name=TGC80176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456076.1;locus_tag=C9F09_23570;product=electron transporter RsxE;protein_id=TGC80176.1;transl_table=11 PYKB01001370.1 Genbank pseudogene 844 996 . - . ID=gene-C9F09_23575;Name=C9F09_23575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23575;pseudo=true PYKB01001370.1 Protein Homology CDS 844 996 . - 0 ID=cds-C9F09_23575;Parent=gene-C9F09_23575;Note=part of membrane-bound complex hought to be involved in electron transport to nitrogen%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456075.1;locus_tag=C9F09_23575;product=electron transport complex subunit RsxG;pseudo=true;transl_table=11 ##sequence-region PYKB01001204.1 1 1067 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001204.1 Genbank region 1 1067 . + . ID=PYKB01001204.1:1..1067;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001204.1 Genbank gene 127 795 . + . ID=gene-C9F09_20505;Name=C9F09_20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20505 PYKB01001204.1 Protein Homology CDS 127 795 . + 0 ID=cds-TGC83464.1;Parent=gene-C9F09_20505;Dbxref=NCBI_GP:TGC83464.1;Name=TGC83464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=C9F09_20505;product=glutathione S-transferase;protein_id=TGC83464.1;transl_table=11 ##sequence-region PYKB01000782.1 1 7517 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000782.1 Genbank region 1 7517 . + . ID=PYKB01000782.1:1..7517;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000782.1 Genbank gene 1 1060 . - . ID=gene-C9F09_12075;Name=C9F09_12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12075;partial=true;start_range=.,1 PYKB01000782.1 Protein Homology CDS 1 1060 . - 0 ID=cds-TGC92482.1;Parent=gene-C9F09_12075;Dbxref=NCBI_GP:TGC92482.1;Name=TGC92482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458159.1;locus_tag=C9F09_12075;partial=true;product=purine ribonucleoside efflux pump NepI;protein_id=TGC92482.1;start_range=.,1;transl_table=11 PYKB01000782.1 Genbank gene 1276 1635 . + . ID=gene-C9F09_12080;Name=C9F09_12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12080 PYKB01000782.1 Protein Homology CDS 1276 1635 . + 0 ID=cds-TGC92483.1;Parent=gene-C9F09_12080;Dbxref=NCBI_GP:TGC92483.1;Name=TGC92483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=C9F09_12080;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=TGC92483.1;transl_table=11 PYKB01000782.1 Genbank gene 1619 1942 . + . ID=gene-C9F09_12085;Name=C9F09_12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12085 PYKB01000782.1 Protein Homology CDS 1619 1942 . + 0 ID=cds-TGC92484.1;Parent=gene-C9F09_12085;Dbxref=NCBI_GP:TGC92484.1;Name=TGC92484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458158.1;locus_tag=C9F09_12085;product=transcriptional regulator;protein_id=TGC92484.1;transl_table=11 PYKB01000782.1 Genbank gene 2033 2302 . - . ID=gene-C9F09_12090;Name=C9F09_12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12090 PYKB01000782.1 Protein Homology CDS 2033 2302 . - 0 ID=cds-TGC92485.1;Parent=gene-C9F09_12090;Dbxref=NCBI_GP:TGC92485.1;Name=TGC92485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458157.1;locus_tag=C9F09_12090;product=HPr family phosphocarrier protein;protein_id=TGC92485.1;transl_table=11 PYKB01000782.1 Genbank gene 2312 3172 . - . ID=gene-C9F09_12095;Name=C9F09_12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12095 PYKB01000782.1 Protein Homology CDS 2312 3172 . - 0 ID=cds-TGC92486.1;Parent=gene-C9F09_12095;Dbxref=NCBI_GP:TGC92486.1;Name=TGC92486.1;Note=class II aldolase%3B catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle%2C glycolysis and gluconeogenesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=C9F09_12095;product=ketose-bisphosphate aldolase;protein_id=TGC92486.1;transl_table=11 PYKB01000782.1 Genbank gene 3235 4719 . - . ID=gene-C9F09_12100;Name=C9F09_12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12100 PYKB01000782.1 Protein Homology CDS 3235 4719 . - 0 ID=cds-TGC92487.1;Parent=gene-C9F09_12100;Dbxref=NCBI_GP:TGC92487.1;Name=TGC92487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458156.1;locus_tag=C9F09_12100;product=carbohydrate kinase;protein_id=TGC92487.1;transl_table=11 PYKB01000782.1 Genbank gene 4712 6070 . - . ID=gene-C9F09_12105;Name=C9F09_12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12105 PYKB01000782.1 Protein Homology CDS 4712 6070 . - 0 ID=cds-TGC92488.1;Parent=gene-C9F09_12105;Dbxref=NCBI_GP:TGC92488.1;Name=TGC92488.1;Note=with GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol%3B subunit IIC forms the translocation channel and contains the substrate binding site;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462681.1;locus_tag=C9F09_12105;product=PTS galactitol transporter subunit IIC;protein_id=TGC92488.1;transl_table=11 PYKB01000782.1 Genbank gene 6146 6433 . - . ID=gene-C9F09_12110;Name=C9F09_12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12110 PYKB01000782.1 Protein Homology CDS 6146 6433 . - 0 ID=cds-TGC92489.1;Parent=gene-C9F09_12110;Dbxref=NCBI_GP:TGC92489.1;Name=TGC92489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458154.1;locus_tag=C9F09_12110;product=PTS sugar transporter subunit IIB;protein_id=TGC92489.1;transl_table=11 PYKB01000782.1 Genbank gene 6430 6903 . - . ID=gene-C9F09_12115;Name=C9F09_12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12115 PYKB01000782.1 Protein Homology CDS 6430 6903 . - 0 ID=cds-TGC92490.1;Parent=gene-C9F09_12115;Dbxref=NCBI_GP:TGC92490.1;Name=TGC92490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462683.1;locus_tag=C9F09_12115;product=PTS suar transporter subunit IIA;protein_id=TGC92490.1;transl_table=11 PYKB01000782.1 Genbank pseudogene 6921 7490 . - . ID=gene-C9F09_12120;Name=C9F09_12120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12120;pseudo=true PYKB01000782.1 Protein Homology CDS 6921 7490 . - 0 ID=cds-C9F09_12120;Parent=gene-C9F09_12120;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458152.1;locus_tag=C9F09_12120;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000202.1 1 1067 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000202.1 Genbank region 1 1067 . + . ID=PYKB01000202.1:1..1067;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000202.1 Genbank gene 151 798 . + . ID=gene-C9F09_02210;Name=C9F09_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02210 PYKB01000202.1 Protein Homology CDS 151 798 . + 0 ID=cds-TGD03719.1;Parent=gene-C9F09_02210;Dbxref=NCBI_GP:TGD03719.1;Name=TGD03719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456096.1;locus_tag=C9F09_02210;product=ribonuclease T;protein_id=TGD03719.1;transl_table=11 PYKB01000202.1 Genbank gene 746 925 . + . ID=gene-C9F09_02215;Name=C9F09_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02215 PYKB01000202.1 Protein Homology CDS 746 925 . + 0 ID=cds-TGD03721.1;Parent=gene-C9F09_02215;Dbxref=NCBI_GP:TGD03721.1;Name=TGD03721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001611799.1;locus_tag=C9F09_02215;product=hypothetical protein;protein_id=TGD03721.1;transl_table=11 PYKB01000202.1 Genbank gene 876 1067 . - . ID=gene-C9F09_02220;Name=C9F09_02220;end_range=1067,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02220;partial=true PYKB01000202.1 Protein Homology CDS 876 1067 . - 0 ID=cds-TGD03720.1;Parent=gene-C9F09_02220;Dbxref=NCBI_GP:TGD03720.1;Name=TGD03720.1;end_range=1067,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456097.1;locus_tag=C9F09_02220;partial=true;product=glutaredoxin;protein_id=TGD03720.1;transl_table=11 ##sequence-region PYKB01000949.1 1 1067 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000949.1 Genbank region 1 1067 . + . ID=PYKB01000949.1:1..1067;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000949.1 Genbank gene 131 769 . + . ID=gene-C9F09_15690;Name=C9F09_15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15690 PYKB01000949.1 Protein Homology CDS 131 769 . + 0 ID=cds-TGC89312.1;Parent=gene-C9F09_15690;Dbxref=NCBI_GP:TGC89312.1;Name=TGC89312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456241.1;locus_tag=C9F09_15690;product=leucine efflux protein;protein_id=TGC89312.1;transl_table=11 PYKB01000949.1 Genbank pseudogene 789 971 . - . ID=gene-C9F09_15695;Name=C9F09_15695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15695;pseudo=true PYKB01000949.1 Protein Homology CDS 789 971 . - 0 ID=cds-C9F09_15695;Parent=gene-C9F09_15695;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534643.1;locus_tag=C9F09_15695;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000411.1 1 1066 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000411.1 Genbank region 1 1066 . + . ID=PYKB01000411.1:1..1066;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000411.1 Genbank gene 1 229 . + . ID=gene-C9F09_04705;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=C9F09_04705;partial=true;start_range=.,1 PYKB01000411.1 Protein Homology CDS 1 229 . + 1 ID=cds-TGC99427.1;Parent=gene-C9F09_04705;Dbxref=NCBI_GP:TGC99427.1;Name=TGC99427.1;Note=regulates the expression of citrate fermentation genes;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=C9F09_04705;partial=true;product=response regulator;protein_id=TGC99427.1;start_range=.,1;transl_table=11 PYKB01000411.1 Genbank gene 283 1066 . - . ID=gene-C9F09_04710;Name=dcuC;end_range=1066,.;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=C9F09_04710;partial=true PYKB01000411.1 Protein Homology CDS 283 1066 . - 1 ID=cds-TGC99428.1;Parent=gene-C9F09_04710;Dbxref=NCBI_GP:TGC99428.1;Name=TGC99428.1;Note=responsible for the transport of C4-dicarboxylates during anaerobic growth;end_range=1066,.;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455204.1;locus_tag=C9F09_04710;partial=true;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=TGC99428.1;transl_table=11 ##sequence-region PYKB01001049.1 1 1065 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001049.1 Genbank region 1 1065 . + . ID=PYKB01001049.1:1..1065;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001049.1 Genbank pseudogene 1 979 . + . ID=gene-C9F09_17640;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=pseudogene;locus_tag=C9F09_17640;pseudo=true PYKB01001049.1 Protein Homology CDS 1 979 . + 1 ID=cds-C9F09_17640;Parent=gene-C9F09_17640;Note=with pduED catalyzes the formation of propionaldehyde from 1%2C2-propanediol%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=C9F09_17640;product=propanediol dehydratase;pseudo=true;transl_table=11 ##sequence-region PYKB01001473.1 1 1064 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001473.1 Genbank region 1 1064 . + . ID=PYKB01001473.1:1..1064;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001473.1 Genbank pseudogene 1 989 . - . ID=gene-C9F09_25650;Name=C9F09_25650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_25650;pseudo=true PYKB01001473.1 Protein Homology CDS 1 989 . - 0 ID=cds-C9F09_25650;Parent=gene-C9F09_25650;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=C9F09_25650;product=alkaline-shock protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000195.1 1 1062 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000195.1 Genbank region 1 1062 . + . ID=PYKB01000195.1:1..1062;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000195.1 Genbank gene 1 285 . + . ID=gene-C9F09_02165;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=C9F09_02165;partial=true;start_range=.,1 PYKB01000195.1 Protein Homology CDS 1 285 . + 0 ID=cds-TGD03806.1;Parent=gene-C9F09_02165;Dbxref=NCBI_GP:TGD03806.1;Name=TGD03806.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457758.1;locus_tag=C9F09_02165;partial=true;product=sodium/panthothenate symporter;protein_id=TGD03806.1;start_range=.,1;transl_table=11 PYKB01000195.1 Genbank gene 297 1062 . + . ID=gene-C9F09_02170;Name=C9F09_02170;end_range=1062,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02170;partial=true PYKB01000195.1 Protein Homology CDS 297 1062 . + 0 ID=cds-TGD03807.1;Parent=gene-C9F09_02170;Dbxref=NCBI_GP:TGD03807.1;Name=TGD03807.1;end_range=1062,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457759.1;locus_tag=C9F09_02170;partial=true;product=50S ribosomal protein L11 methyltransferase;protein_id=TGD03807.1;transl_table=11 ##sequence-region PYKB01001546.1 1 1062 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001546.1 Genbank region 1 1062 . + . ID=PYKB01001546.1:1..1062;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001546.1 Genbank pseudogene 70 591 . - . ID=gene-C9F09_26985;Name=C9F09_26985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_26985;pseudo=true PYKB01001546.1 Protein Homology CDS 70 591 . - 0 ID=cds-C9F09_26985;Parent=gene-C9F09_26985;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=C9F09_26985;product=IscS subfamily cysteine desulfurase;pseudo=true;transl_table=11 PYKB01001546.1 Genbank gene 772 1062 . - . ID=gene-C9F09_26990;Name=C9F09_26990;end_range=1062,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26990;partial=true PYKB01001546.1 Protein Homology CDS 772 1062 . - 0 ID=cds-TGC76135.1;Parent=gene-C9F09_26990;Dbxref=NCBI_GP:TGC76135.1;Name=TGC76135.1;end_range=1062,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457075.1;locus_tag=C9F09_26990;partial=true;product=hypothetical protein;protein_id=TGC76135.1;transl_table=11 ##sequence-region PYKB01000474.1 1 1060 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000474.1 Genbank region 1 1060 . + . ID=PYKB01000474.1:1..1060;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000474.1 Genbank pseudogene 78 311 . - . ID=gene-C9F09_05940;Name=flhe;gbkey=Gene;gene=flhe;gene_biotype=pseudogene;locus_tag=C9F09_05940;pseudo=true PYKB01000474.1 Protein Homology CDS 78 311 . - 0 ID=cds-C9F09_05940;Parent=gene-C9F09_05940;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=flhe;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456478.1;locus_tag=C9F09_05940;product=flagellar protein FlhE;pseudo=true;transl_table=11 PYKB01000474.1 Genbank gene 311 1060 . - . ID=gene-C9F09_05945;Name=C9F09_05945;end_range=1060,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05945;partial=true PYKB01000474.1 Protein Homology CDS 311 1060 . - 0 ID=cds-TGC98233.1;Parent=gene-C9F09_05945;Dbxref=NCBI_GP:TGC98233.1;Name=TGC98233.1;end_range=1060,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131976.1;locus_tag=C9F09_05945;partial=true;product=flagellar biosynthesis protein FlhA;protein_id=TGC98233.1;transl_table=11 ##sequence-region PYKB01001285.1 1 1059 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001285.1 Genbank region 1 1059 . + . ID=PYKB01001285.1:1..1059;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001285.1 Genbank gene 1 716 . - . ID=gene-C9F09_22010;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=C9F09_22010;partial=true;start_range=.,1 PYKB01001285.1 Protein Homology CDS 1 716 . - 0 ID=cds-TGC81899.1;Parent=gene-C9F09_22010;Dbxref=NCBI_GP:TGC81899.1;Name=TGC81899.1;Note=may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ;gbkey=CDS;gene=cysN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457323.1;locus_tag=C9F09_22010;partial=true;product=sulfate adenylyltransferase subunit CysN;protein_id=TGC81899.1;start_range=.,1;transl_table=11 PYKB01001285.1 Genbank gene 726 1059 . - . ID=gene-C9F09_22015;Name=C9F09_22015;end_range=1059,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22015;partial=true PYKB01001285.1 Protein Homology CDS 726 1059 . - 1 ID=cds-TGC81900.1;Parent=gene-C9F09_22015;Dbxref=NCBI_GP:TGC81900.1;Name=TGC81900.1;Note=with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP;end_range=1059,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=C9F09_22015;partial=true;product=sulfate adenylyltransferase small subunit;protein_id=TGC81900.1;transl_table=11 ##sequence-region PYKB01001251.1 1 1055 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001251.1 Genbank region 1 1055 . + . ID=PYKB01001251.1:1..1055;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001251.1 Genbank pseudogene 173 694 . + . ID=gene-C9F09_21340;Name=C9F09_21340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21340;pseudo=true PYKB01001251.1 Protein Homology CDS 173 694 . + 0 ID=cds-C9F09_21340;Parent=gene-C9F09_21340;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457001.1;locus_tag=C9F09_21340;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;pseudo=true;transl_table=11 PYKB01001251.1 Genbank gene 691 1055 . + . ID=gene-C9F09_21345;Name=C9F09_21345;end_range=1055,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21345;partial=true PYKB01001251.1 Protein Homology CDS 691 1055 . + 0 ID=cds-TGC82428.1;Parent=gene-C9F09_21345;Dbxref=NCBI_GP:TGC82428.1;Name=TGC82428.1;end_range=1055,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=C9F09_21345;partial=true;product=phosphate acetyltransferase;protein_id=TGC82428.1;transl_table=11 ##sequence-region PYKB01000572.1 1 7509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000572.1 Genbank region 1 7509 . + . ID=PYKB01000572.1:1..7509;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000572.1 Genbank gene 1 1006 . - . ID=gene-C9F09_08080;Name=C9F09_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08080;partial=true;start_range=.,1 PYKB01000572.1 Protein Homology CDS 1 1006 . - 0 ID=cds-TGC95986.1;Parent=gene-C9F09_08080;Dbxref=NCBI_GP:TGC95986.1;Name=TGC95986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=C9F09_08080;partial=true;product=selenide%2C water dikinase SelD;protein_id=TGC95986.1;start_range=.,1;transl_table=11 PYKB01000572.1 Genbank gene 1124 1675 . - . ID=gene-C9F09_08085;Name=C9F09_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08085 PYKB01000572.1 Protein Homology CDS 1124 1675 . - 0 ID=cds-TGC95981.1;Parent=gene-C9F09_08085;Dbxref=NCBI_GP:TGC95981.1;Name=TGC95981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456216.1;locus_tag=C9F09_08085;product=NAD(P)H nitroreductase;protein_id=TGC95981.1;transl_table=11 PYKB01000572.1 Genbank gene 1849 3705 . + . ID=gene-C9F09_08090;Name=C9F09_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08090 PYKB01000572.1 Protein Homology CDS 1849 3705 . + 0 ID=cds-TGC95982.1;Parent=gene-C9F09_08090;Dbxref=NCBI_GP:TGC95982.1;Name=TGC95982.1;Note=SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456217.1;locus_tag=C9F09_08090;product=signal peptide peptidase SppA;protein_id=TGC95982.1;transl_table=11 PYKB01000572.1 Genbank gene 3801 4817 . + . ID=gene-C9F09_08095;Name=C9F09_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08095 PYKB01000572.1 Protein Homology CDS 3801 4817 . + 0 ID=cds-TGC95983.1;Parent=gene-C9F09_08095;Dbxref=NCBI_GP:TGC95983.1;Name=TGC95983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=C9F09_08095;product=L-asparaginase 1;protein_id=TGC95983.1;transl_table=11 PYKB01000572.1 Genbank gene 4844 5500 . + . ID=gene-C9F09_08100;Name=C9F09_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08100 PYKB01000572.1 Protein Homology CDS 4844 5500 . + 0 ID=cds-TGC95984.1;Parent=gene-C9F09_08100;Dbxref=NCBI_GP:TGC95984.1;Name=TGC95984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=C9F09_08100;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=TGC95984.1;transl_table=11 PYKB01000572.1 Genbank gene 5603 6961 . - . ID=gene-C9F09_08105;Name=C9F09_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08105 PYKB01000572.1 Protein Homology CDS 5603 6961 . - 0 ID=cds-TGC95985.1;Parent=gene-C9F09_08105;Dbxref=NCBI_GP:TGC95985.1;Name=TGC95985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389924.1;locus_tag=C9F09_08105;product=MFS transporter;protein_id=TGC95985.1;transl_table=11 PYKB01000572.1 Genbank pseudogene 7097 7429 . - . ID=gene-C9F09_08110;Name=C9F09_08110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08110;pseudo=true PYKB01000572.1 Protein Homology CDS 7097 7429 . - 0 ID=cds-C9F09_08110;Parent=gene-C9F09_08110;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310506.1;locus_tag=C9F09_08110;product=DeoR/GlpR transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKB01001218.1 1 1053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001218.1 Genbank region 1 1053 . + . ID=PYKB01001218.1:1..1053;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001218.1 Genbank gene 1 665 . - . ID=gene-C9F09_20700;Name=C9F09_20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20700;partial=true;start_range=.,1 PYKB01001218.1 Protein Homology CDS 1 665 . - 0 ID=cds-TGC83071.1;Parent=gene-C9F09_20700;Dbxref=NCBI_GP:TGC83071.1;Name=TGC83071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454924.1;locus_tag=C9F09_20700;partial=true;product=transpeptidase;protein_id=TGC83071.1;start_range=.,1;transl_table=11 PYKB01001218.1 Genbank gene 915 1053 . + . ID=gene-C9F09_20705;Name=C9F09_20705;end_range=1053,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20705;partial=true PYKB01001218.1 Protein Homology CDS 915 1053 . + 0 ID=cds-TGC83072.1;Parent=gene-C9F09_20705;Dbxref=NCBI_GP:TGC83072.1;Name=TGC83072.1;Note=involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function;end_range=1053,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308285.1;locus_tag=C9F09_20705;partial=true;product=DNA polymerase IV;protein_id=TGC83072.1;transl_table=11 ##sequence-region PYKB01000768.1 1 1052 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000768.1 Genbank region 1 1052 . + . ID=PYKB01000768.1:1..1052;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000768.1 Genbank pseudogene 23 148 . + . ID=gene-C9F09_11930;Name=C9F09_11930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11930;pseudo=true PYKB01000768.1 Protein Homology CDS 23 148 . + 0 ID=cds-C9F09_11930;Parent=gene-C9F09_11930;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312924.1;locus_tag=C9F09_11930;product=TonB-dependent receptor;pseudo=true;transl_table=11 PYKB01000768.1 Genbank gene 93 944 . + . ID=gene-C9F09_11935;Name=C9F09_11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11935 PYKB01000768.1 Protein Homology CDS 93 944 . + 0 ID=cds-TGC92639.1;Parent=gene-C9F09_11935;Dbxref=NCBI_GP:TGC92639.1;Name=TGC92639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=C9F09_11935;product=glutamate racemase;protein_id=TGC92639.1;transl_table=11 ##sequence-region PYKB01001347.1 1 1052 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001347.1 Genbank region 1 1052 . + . ID=PYKB01001347.1:1..1052;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001347.1 Genbank gene 228 1052 . + . ID=gene-C9F09_23175;Name=C9F09_23175;end_range=1052,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23175;partial=true PYKB01001347.1 Protein Homology CDS 228 1052 . + 0 ID=cds-TGC80553.1;Parent=gene-C9F09_23175;Dbxref=NCBI_GP:TGC80553.1;Name=TGC80553.1;Note=specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport;end_range=1052,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=C9F09_23175;partial=true;product=ArgP/LysG family DNA-binding transcriptional regulator;protein_id=TGC80553.1;transl_table=11 ##sequence-region PYKB01000070.1 1 1051 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000070.1 Genbank region 1 1051 . + . ID=PYKB01000070.1:1..1051;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000070.1 Genbank gene 1 410 . - . ID=gene-C9F09_00840;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=C9F09_00840;partial=true;start_range=.,1 PYKB01000070.1 Protein Homology CDS 1 410 . - 0 ID=cds-TGD06066.1;Parent=gene-C9F09_00840;Dbxref=NCBI_GP:TGD06066.1;Name=TGD06066.1;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;gbkey=CDS;gene=mglC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=C9F09_00840;partial=true;product=beta-methylgalactoside transporter permease;protein_id=TGD06066.1;start_range=.,1;transl_table=11 PYKB01000070.1 Genbank gene 426 1051 . - . ID=gene-C9F09_00845;Name=C9F09_00845;end_range=1051,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00845;partial=true PYKB01000070.1 Protein Homology CDS 426 1051 . - 2 ID=cds-TGD06067.1;Parent=gene-C9F09_00845;Dbxref=NCBI_GP:TGD06067.1;Name=TGD06067.1;end_range=1051,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461134.1;locus_tag=C9F09_00845;partial=true;product=sugar ABC transporter ATP-binding protein;protein_id=TGD06067.1;transl_table=11 ##sequence-region PYKB01000497.1 1 1049 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000497.1 Genbank region 1 1049 . + . ID=PYKB01000497.1:1..1049;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000497.1 Genbank gene 1 725 . + . ID=gene-C9F09_06335;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=C9F09_06335;partial=true;start_range=.,1 PYKB01000497.1 Protein Homology CDS 1 725 . + 2 ID=cds-TGC97751.1;Parent=gene-C9F09_06335;Dbxref=NCBI_GP:TGC97751.1;Name=TGC97751.1;Note=in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center;gbkey=CDS;gene=thiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=C9F09_06335;partial=true;product=2-iminoacetate synthase ThiH;protein_id=TGC97751.1;start_range=.,1;transl_table=11 PYKB01000497.1 Genbank pseudogene 807 1021 . - . ID=gene-C9F09_06340;Name=C9F09_06340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_06340;pseudo=true PYKB01000497.1 Protein Homology CDS 807 1021 . - 0 ID=cds-C9F09_06340;Parent=gene-C9F09_06340;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466138.1;locus_tag=C9F09_06340;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000931.1 1 1047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000931.1 Genbank region 1 1047 . + . ID=PYKB01000931.1:1..1047;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000931.1 Genbank gene 150 671 . - . ID=gene-C9F09_15370;Name=C9F09_15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15370 PYKB01000931.1 Protein Homology CDS 150 671 . - 0 ID=cds-TGC89686.1;Parent=gene-C9F09_15370;Dbxref=NCBI_GP:TGC89686.1;Name=TGC89686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456273.1;locus_tag=C9F09_15370;product=lipoprotein EnvE;protein_id=TGC89686.1;transl_table=11 ##sequence-region PYKB01000091.1 1 1046 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000091.1 Genbank region 1 1046 . + . ID=PYKB01000091.1:1..1046;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000091.1 Genbank gene 1 303 . - . ID=gene-C9F09_01090;Name=C9F09_01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01090;partial=true;start_range=.,1 PYKB01000091.1 Protein Homology CDS 1 303 . - 0 ID=cds-TGD05663.1;Parent=gene-C9F09_01090;Dbxref=NCBI_GP:TGD05663.1;Name=TGD05663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=C9F09_01090;partial=true;product=transcriptional regulator;protein_id=TGD05663.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000377.1 1 1038 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000377.1 Genbank region 1 1038 . + . ID=PYKB01000377.1:1..1038;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000377.1 Genbank gene 1 1038 . - . ID=gene-C9F09_04290;Name=C9F09_04290;end_range=1038,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04290;partial=true;start_range=.,1 PYKB01000377.1 Protein Homology CDS 1 1038 . - 2 ID=cds-TGD00010.1;Parent=gene-C9F09_04290;Dbxref=NCBI_GP:TGD00010.1;Name=TGD00010.1;end_range=1038,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457304.1;locus_tag=C9F09_04290;partial=true;product=gluconate permease;protein_id=TGD00010.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000788.1 1 1038 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000788.1 Genbank region 1 1038 . + . ID=PYKB01000788.1:1..1038;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000788.1 Genbank gene 1 1038 . + . ID=gene-C9F09_12230;Name=C9F09_12230;end_range=1038,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12230;partial=true;start_range=.,1 PYKB01000788.1 Protein Homology CDS 1 1038 . + 2 ID=cds-TGC92346.1;Parent=gene-C9F09_12230;Dbxref=NCBI_GP:TGC92346.1;Name=TGC92346.1;end_range=1038,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457531.1;locus_tag=C9F09_12230;partial=true;product=fructuronate reductase;protein_id=TGC92346.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001031.1 1 1037 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001031.1 Genbank region 1 1037 . + . ID=PYKB01001031.1:1..1037;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001031.1 Genbank gene 1 209 . + . ID=gene-C9F09_17235;Name=C9F09_17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17235;partial=true;start_range=.,1 PYKB01001031.1 Protein Homology CDS 1 209 . + 2 ID=cds-TGC87559.1;Parent=gene-C9F09_17235;Dbxref=NCBI_GP:TGC87559.1;Name=TGC87559.1;Note=predicted SAM-dependent methyltransferase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=C9F09_17235;partial=true;product=16S rRNA (guanine(1516)-N(2))-methyltransferase;protein_id=TGC87559.1;start_range=.,1;transl_table=11 PYKB01001031.1 Genbank gene 301 1037 . - . ID=gene-C9F09_17240;Name=tppB;end_range=1037,.;gbkey=Gene;gene=tppB;gene_biotype=protein_coding;gene_synonym=ydgR;locus_tag=C9F09_17240;partial=true PYKB01001031.1 Protein Homology CDS 301 1037 . - 2 ID=cds-TGC87560.1;Parent=gene-C9F09_17240;Dbxref=NCBI_GP:TGC87560.1;Name=TGC87560.1;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation;end_range=1037,.;gbkey=CDS;gene=tppB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=C9F09_17240;partial=true;product=dipeptide/tripeptide permease;protein_id=TGC87560.1;transl_table=11 ##sequence-region PYKB01000797.1 1 7492 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000797.1 Genbank region 1 7492 . + . ID=PYKB01000797.1:1..7492;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000797.1 Genbank gene 1 977 . + . ID=gene-C9F09_12365;Name=C9F09_12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12365;partial=true;start_range=.,1 PYKB01000797.1 Protein Homology CDS 1 977 . + 2 ID=cds-TGC92187.1;Parent=gene-C9F09_12365;Dbxref=NCBI_GP:TGC92187.1;Name=TGC92187.1;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462843.1;locus_tag=C9F09_12365;partial=true;product=ATP-dependent DNA helicase RecQ;protein_id=TGC92187.1;start_range=.,1;transl_table=11 PYKB01000797.1 Genbank gene 1041 1661 . + . ID=gene-C9F09_12370;Name=C9F09_12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12370 PYKB01000797.1 Protein Homology CDS 1041 1661 . + 0 ID=cds-TGC92188.1;Parent=gene-C9F09_12370;Dbxref=NCBI_GP:TGC92188.1;Name=TGC92188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457792.1;locus_tag=C9F09_12370;product=threonine export protein RhtC;protein_id=TGC92188.1;transl_table=11 PYKB01000797.1 Genbank gene 1701 2321 . - . ID=gene-C9F09_12375;Name=C9F09_12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12375 PYKB01000797.1 Protein Homology CDS 1701 2321 . - 0 ID=cds-TGC92189.1;Parent=gene-C9F09_12375;Dbxref=NCBI_GP:TGC92189.1;Name=TGC92189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457791.1;locus_tag=C9F09_12375;product=homoserine/homoserine lactone efflux protein;protein_id=TGC92189.1;transl_table=11 PYKB01000797.1 Genbank gene 2432 3448 . + . ID=gene-C9F09_12380;Name=C9F09_12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12380 PYKB01000797.1 Protein Homology CDS 2432 3448 . + 0 ID=cds-TGC92190.1;Parent=gene-C9F09_12380;Dbxref=NCBI_GP:TGC92190.1;Name=TGC92190.1;Note=lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=C9F09_12380;product=lysophospholipase L2;protein_id=TGC92190.1;transl_table=11 PYKB01000797.1 Genbank gene 3464 4264 . + . ID=gene-C9F09_12385;Name=C9F09_12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12385 PYKB01000797.1 Protein Homology CDS 3464 4264 . + 0 ID=cds-TGC92191.1;Parent=gene-C9F09_12385;Dbxref=NCBI_GP:TGC92191.1;Name=TGC92191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457789.1;locus_tag=C9F09_12385;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=TGC92191.1;transl_table=11 PYKB01000797.1 Genbank gene 4345 5244 . + . ID=gene-C9F09_12390;Name=C9F09_12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12390 PYKB01000797.1 Protein Homology CDS 4345 5244 . + 0 ID=cds-TGC92192.1;Parent=gene-C9F09_12390;Dbxref=NCBI_GP:TGC92192.1;Name=TGC92192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457788.1;locus_tag=C9F09_12390;product=EamA family transporter;protein_id=TGC92192.1;transl_table=11 PYKB01000797.1 Genbank gene 5132 6085 . - . ID=gene-C9F09_12395;Name=C9F09_12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12395 PYKB01000797.1 Protein Homology CDS 5132 6085 . - 0 ID=cds-TGC92193.1;Parent=gene-C9F09_12395;Dbxref=NCBI_GP:TGC92193.1;Name=TGC92193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457787.1;locus_tag=C9F09_12395;product=transcriptional regulator;protein_id=TGC92193.1;transl_table=11 PYKB01000797.1 Genbank gene 6334 7492 . + . ID=gene-C9F09_12400;Name=C9F09_12400;end_range=7492,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12400;partial=true PYKB01000797.1 Protein Homology CDS 6334 7492 . + 0 ID=cds-TGC92194.1;Parent=gene-C9F09_12400;Dbxref=NCBI_GP:TGC92194.1;Name=TGC92194.1;end_range=7492,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=C9F09_12400;partial=true;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=TGC92194.1;transl_table=11 ##sequence-region PYKB01001498.1 1 1036 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001498.1 Genbank region 1 1036 . + . ID=PYKB01001498.1:1..1036;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001498.1 Genbank pseudogene 51 470 . + . ID=gene-C9F09_25990;Name=panB;gbkey=Gene;gene=panB;gene_biotype=pseudogene;locus_tag=C9F09_25990;pseudo=true PYKB01001498.1 Protein Homology CDS 51 470 . + 0 ID=cds-C9F09_25990;Parent=gene-C9F09_25990;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=panB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=C9F09_25990;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;pseudo=true;transl_table=11 PYKB01001498.1 Genbank gene 596 1036 . + . ID=gene-C9F09_25995;Name=C9F09_25995;end_range=1036,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25995;partial=true PYKB01001498.1 Protein Homology CDS 596 1036 . + 0 ID=cds-TGC77324.1;Parent=gene-C9F09_25995;Dbxref=NCBI_GP:TGC77324.1;Name=TGC77324.1;end_range=1036,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454790.1;locus_tag=C9F09_25995;partial=true;product=hypothetical protein;protein_id=TGC77324.1;transl_table=11 ##sequence-region PYKB01001426.1 1 1034 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001426.1 Genbank region 1 1034 . + . ID=PYKB01001426.1:1..1034;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001426.1 Genbank pseudogene 28 1034 . - . ID=gene-C9F09_24535;Name=C9F09_24535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_24535;pseudo=true PYKB01001426.1 Protein Homology CDS 28 1034 . - 2 ID=cds-C9F09_24535;Parent=gene-C9F09_24535;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=C9F09_24535;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001104.1 1 1031 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001104.1 Genbank region 1 1031 . + . ID=PYKB01001104.1:1..1031;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001104.1 Genbank gene 1 1031 . + . ID=gene-C9F09_18490;Name=C9F09_18490;end_range=1031,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18490;partial=true;start_range=.,1 PYKB01001104.1 Protein Homology CDS 1 1031 . + 0 ID=cds-TGC85897.1;Parent=gene-C9F09_18490;Dbxref=NCBI_GP:TGC85897.1;Name=TGC85897.1;end_range=1031,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044775.1;locus_tag=C9F09_18490;partial=true;product=AIDA autotransporter-like protein ShdA;protein_id=TGC85897.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001068.1 1 1023 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001068.1 Genbank region 1 1023 . + . ID=PYKB01001068.1:1..1023;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001068.1 Genbank gene 1 1023 . - . ID=gene-C9F09_17880;Name=dagR;end_range=1023,.;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=C9F09_17880;partial=true;start_range=.,1 PYKB01001068.1 Protein Homology CDS 1 1023 . - 0 ID=cds-TGC86778.1;Parent=gene-C9F09_17880;Dbxref=NCBI_GP:TGC86778.1;Name=TGC86778.1;end_range=1023,.;gbkey=CDS;gene=dagR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=C9F09_17880;partial=true;product=transcriptional regulator DagR;protein_id=TGC86778.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001186.1 1 1022 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001186.1 Genbank region 1 1022 . + . ID=PYKB01001186.1:1..1022;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001186.1 Genbank gene 1 376 . - . ID=gene-C9F09_20170;Name=C9F09_20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20170;partial=true;start_range=.,1 PYKB01001186.1 Protein Homology CDS 1 376 . - 0 ID=cds-TGC83807.1;Parent=gene-C9F09_20170;Dbxref=NCBI_GP:TGC83807.1;Name=TGC83807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=C9F09_20170;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGC83807.1;start_range=.,1;transl_table=11 PYKB01001186.1 Genbank gene 389 1022 . - . ID=gene-C9F09_20175;Name=C9F09_20175;end_range=1022,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20175;partial=true PYKB01001186.1 Protein Homology CDS 389 1022 . - 1 ID=cds-TGC83808.1;Parent=gene-C9F09_20175;Dbxref=NCBI_GP:TGC83808.1;Name=TGC83808.1;end_range=1022,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=C9F09_20175;partial=true;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=TGC83808.1;transl_table=11 ##sequence-region PYKB01001752.1 1 1021 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001752.1 Genbank region 1 1021 . + . ID=PYKB01001752.1:1..1021;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001752.1 Genbank gene 230 814 . + . ID=gene-C9F09_30690;Name=C9F09_30690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30690 PYKB01001752.1 Protein Homology CDS 230 814 . + 0 ID=cds-TGC70403.1;Parent=gene-C9F09_30690;Dbxref=NCBI_GP:TGC70403.1;Name=TGC70403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=C9F09_30690;product=30S ribosomal protein S5 alanine N-acetyltransferase;protein_id=TGC70403.1;transl_table=11 PYKB01001752.1 Genbank gene 850 1021 . + . ID=gene-C9F09_30695;Name=C9F09_30695;end_range=1021,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30695;partial=true PYKB01001752.1 Protein Homology CDS 850 1021 . + 0 ID=cds-TGC70404.1;Parent=gene-C9F09_30695;Dbxref=NCBI_GP:TGC70404.1;Name=TGC70404.1;end_range=1021,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455661.1;locus_tag=C9F09_30695;partial=true;product=DUF480 domain-containing protein;protein_id=TGC70404.1;transl_table=11 ##sequence-region PYKB01000041.1 1 1018 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000041.1 Genbank region 1 1018 . + . ID=PYKB01000041.1:1..1018;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000041.1 Genbank pseudogene 1 1018 . + . ID=gene-C9F09_00485;Name=C9F09_00485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00485;pseudo=true PYKB01000041.1 Protein Homology CDS 1 1018 . + 0 ID=cds-C9F09_00485;Parent=gene-C9F09_00485;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=C9F09_00485;product=colanic acid biosynthesis pyruvyl transferase WcaK;pseudo=true;transl_table=11 ##sequence-region PYKB01001496.1 1 1016 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001496.1 Genbank region 1 1016 . + . ID=PYKB01001496.1:1..1016;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001496.1 Genbank gene 1 1016 . + . ID=gene-C9F09_25980;Name=C9F09_25980;end_range=1016,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25980;partial=true;start_range=.,1 PYKB01001496.1 Protein Homology CDS 1 1016 . + 0 ID=cds-TGC77359.1;Parent=gene-C9F09_25980;Dbxref=NCBI_GP:TGC77359.1;Name=TGC77359.1;end_range=1016,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=C9F09_25980;partial=true;product=alkaline-shock protein;protein_id=TGC77359.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000852.1 1 1015 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000852.1 Genbank region 1 1015 . + . ID=PYKB01000852.1:1..1015;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000852.1 Genbank gene 1 502 . - . ID=gene-C9F09_13585;Name=C9F09_13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13585;partial=true;start_range=.,1 PYKB01000852.1 Protein Homology CDS 1 502 . - 0 ID=cds-TGC91218.1;Parent=gene-C9F09_13585;Dbxref=NCBI_GP:TGC91218.1;Name=TGC91218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=C9F09_13585;partial=true;product=molybdate ABC transporter substrate-binding protein;protein_id=TGC91218.1;start_range=.,1;transl_table=11 PYKB01000852.1 Genbank gene 669 818 . - . ID=gene-C9F09_13590;Name=C9F09_13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13590 PYKB01000852.1 Protein Homology CDS 669 818 . - 0 ID=cds-TGC91219.1;Parent=gene-C9F09_13590;Dbxref=NCBI_GP:TGC91219.1;Name=TGC91219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=C9F09_13590;product=multidrug efflux pump-associated protein%2C AcrZ family;protein_id=TGC91219.1;transl_table=11 ##sequence-region PYKB01001084.1 1 7479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001084.1 Genbank region 1 7479 . + . ID=PYKB01001084.1:1..7479;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001084.1 Genbank gene 1 817 . - . ID=gene-C9F09_18125;Name=C9F09_18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18125;partial=true;start_range=.,1 PYKB01001084.1 Protein Homology CDS 1 817 . - 0 ID=cds-TGC86344.1;Parent=gene-C9F09_18125;Dbxref=NCBI_GP:TGC86344.1;Name=TGC86344.1;Note=P-type%3B involved in magnesium transport into the cytoplasm;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=C9F09_18125;partial=true;product=magnesium-translocating P-type ATPase;protein_id=TGC86344.1;start_range=.,1;transl_table=11 PYKB01001084.1 Genbank gene 1201 2148 . + . ID=gene-C9F09_18130;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=C9F09_18130 PYKB01001084.1 Protein Homology CDS 1201 2148 . + 0 ID=cds-TGC86341.1;Parent=gene-C9F09_18130;Dbxref=NCBI_GP:TGC86341.1;Name=TGC86341.1;Note=regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon;gbkey=CDS;gene=treR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=C9F09_18130;product=HTH-type transcriptional regulator TreR;protein_id=TGC86341.1;transl_table=11 PYKB01001084.1 Genbank gene 2286 3704 . + . ID=gene-C9F09_18135;Name=C9F09_18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18135 PYKB01001084.1 Protein Homology CDS 2286 3704 . + 0 ID=cds-TGC86342.1;Parent=gene-C9F09_18135;Dbxref=NCBI_GP:TGC86342.1;Name=TGC86342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458872.1;locus_tag=C9F09_18135;product=PTS trehalose transporter subunit IIBC;protein_id=TGC86342.1;transl_table=11 PYKB01001084.1 Genbank gene 3754 5406 . + . ID=gene-C9F09_18140;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=C9F09_18140 PYKB01001084.1 Protein Homology CDS 3754 5406 . + 0 ID=cds-TGC86343.1;Parent=gene-C9F09_18140;Dbxref=NCBI_GP:TGC86343.1;Name=TGC86343.1;gbkey=CDS;gene=treC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=C9F09_18140;product=alpha%2Calpha-phosphotrehalase;protein_id=TGC86343.1;transl_table=11 PYKB01001084.1 Genbank gene 5815 7479 . + . ID=gene-C9F09_18145;Name=C9F09_18145;end_range=7479,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18145;partial=true PYKB01001084.1 Protein Homology CDS 5815 7479 . + 0 ID=cds-TGC86345.1;Parent=gene-C9F09_18145;Dbxref=NCBI_GP:TGC86345.1;Name=TGC86345.1;end_range=7479,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458869.1;locus_tag=C9F09_18145;partial=true;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=TGC86345.1;transl_table=11 ##sequence-region PYKB01001443.1 1 1013 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001443.1 Genbank region 1 1013 . + . ID=PYKB01001443.1:1..1013;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001443.1 Genbank pseudogene 1 942 . - . ID=gene-C9F09_25030;Name=C9F09_25030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_25030;pseudo=true PYKB01001443.1 Protein Homology CDS 1 942 . - 0 ID=cds-C9F09_25030;Parent=gene-C9F09_25030;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=C9F09_25030;product=sodium/panthothenate symporter;pseudo=true;transl_table=11 ##sequence-region PYKB01000704.1 1 1013 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000704.1 Genbank region 1 1013 . + . ID=PYKB01000704.1:1..1013;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000704.1 Genbank gene 1 554 . - . ID=gene-C9F09_10710;Name=C9F09_10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10710;partial=true;start_range=.,1 PYKB01000704.1 Protein Homology CDS 1 554 . - 0 ID=cds-TGC93647.1;Parent=gene-C9F09_10710;Dbxref=NCBI_GP:TGC93647.1;Name=TGC93647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=C9F09_10710;partial=true;product=mechanosensitive channel protein;protein_id=TGC93647.1;start_range=.,1;transl_table=11 PYKB01000704.1 Genbank gene 673 1013 . - . ID=gene-C9F09_10715;Name=glnQ;end_range=1013,.;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=C9F09_10715;partial=true PYKB01000704.1 Protein Homology CDS 673 1013 . - 2 ID=cds-TGC93648.1;Parent=gene-C9F09_10715;Dbxref=NCBI_GP:TGC93648.1;Name=TGC93648.1;Note=similar to ATP-binding component of ABC transporters;end_range=1013,.;gbkey=CDS;gene=glnQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=C9F09_10715;partial=true;product=glutamine ABC transporter ATP-binding protein;protein_id=TGC93648.1;transl_table=11 ##sequence-region PYKB01000413.1 1 1009 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000413.1 Genbank region 1 1009 . + . ID=PYKB01000413.1:1..1009;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000413.1 Genbank pseudogene 67 555 . - . ID=gene-C9F09_04730;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=pseudogene;locus_tag=C9F09_04730;pseudo=true PYKB01000413.1 Protein Homology CDS 67 555 . - 0 ID=cds-C9F09_04730;Parent=gene-C9F09_04730;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504841.1;locus_tag=C9F09_04730;product=osmoprotectant ABC transporter permease OsmW;pseudo=true;transl_table=11 PYKB01000413.1 Genbank gene 565 1009 . - . ID=gene-C9F09_04735;Name=osmX;end_range=1009,.;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=C9F09_04735;partial=true PYKB01000413.1 Protein Homology CDS 565 1009 . - 1 ID=cds-TGC99378.1;Parent=gene-C9F09_04735;Dbxref=NCBI_GP:TGC99378.1;Name=TGC99378.1;end_range=1009,.;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455986.1;locus_tag=C9F09_04735;partial=true;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=TGC99378.1;transl_table=11 ##sequence-region PYKB01000327.1 1 1005 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000327.1 Genbank region 1 1005 . + . ID=PYKB01000327.1:1..1005;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000327.1 Genbank gene 66 275 . + . ID=gene-C9F09_03635;Name=C9F09_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03635 PYKB01000327.1 Protein Homology CDS 66 275 . + 0 ID=cds-TGD00994.1;Parent=gene-C9F09_03635;Dbxref=NCBI_GP:TGD00994.1;Name=TGD00994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147569.1;locus_tag=C9F09_03635;product=tryptophanyl-tRNA synthetase;protein_id=TGD00994.1;transl_table=11 PYKB01000327.1 Genbank gene 420 590 . - . ID=gene-C9F09_03640;Name=C9F09_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03640 PYKB01000327.1 Protein Homology CDS 420 590 . - 0 ID=cds-TGD00995.1;Parent=gene-C9F09_03640;Dbxref=NCBI_GP:TGD00995.1;Name=TGD00995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458424.1;locus_tag=C9F09_03640;product=DUF4223 domain-containing protein;protein_id=TGD00995.1;transl_table=11 PYKB01000327.1 Genbank pseudogene 783 962 . - . ID=gene-C9F09_03645;Name=C9F09_03645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03645;pseudo=true PYKB01000327.1 Protein Homology CDS 783 962 . - 0 ID=cds-C9F09_03645;Parent=gene-C9F09_03645;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147530.1;locus_tag=C9F09_03645;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000937.1 1 1004 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000937.1 Genbank region 1 1004 . + . ID=PYKB01000937.1:1..1004;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000937.1 Genbank gene 1 1004 . + . ID=gene-C9F09_15480;Name=C9F09_15480;end_range=1004,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15480;partial=true;start_range=.,1 PYKB01000937.1 Protein Homology CDS 1 1004 . + 1 ID=cds-TGC89609.1;Parent=gene-C9F09_15480;Dbxref=NCBI_GP:TGC89609.1;Name=TGC89609.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;end_range=1004,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=C9F09_15480;partial=true;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=TGC89609.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000256.1 1 1000 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000256.1 Genbank region 1 1000 . + . ID=PYKB01000256.1:1..1000;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000256.1 Genbank gene 1 393 . - . ID=gene-C9F09_02790;Name=C9F09_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02790;partial=true;start_range=.,1 PYKB01000256.1 Protein Homology CDS 1 393 . - 0 ID=cds-TGD02435.1;Parent=gene-C9F09_02790;Dbxref=NCBI_GP:TGD02435.1;Name=TGD02435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=C9F09_02790;partial=true;product=hypothetical protein;protein_id=TGD02435.1;start_range=.,1;transl_table=11 PYKB01000256.1 Genbank gene 722 952 . - . ID=gene-C9F09_02795;Name=C9F09_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02795 PYKB01000256.1 Protein Homology CDS 722 952 . - 0 ID=cds-TGD02434.1;Parent=gene-C9F09_02795;Dbxref=NCBI_GP:TGD02434.1;Name=TGD02434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001714937.1;locus_tag=C9F09_02795;product=siroheme synthase;protein_id=TGD02434.1;transl_table=11 ##sequence-region PYKB01000148.1 1 999 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000148.1 Genbank region 1 999 . + . ID=PYKB01000148.1:1..999;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000148.1 Genbank pseudogene 136 999 . - . ID=gene-C9F09_01685;Name=C9F09_01685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01685;pseudo=true PYKB01000148.1 Protein Homology CDS 136 999 . - 0 ID=cds-C9F09_01685;Parent=gene-C9F09_01685;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=C9F09_01685;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKB01000687.1 1 991 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000687.1 Genbank region 1 991 . + . ID=PYKB01000687.1:1..991;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000687.1 Genbank gene 1 991 . + . ID=gene-C9F09_10420;Name=C9F09_10420;end_range=991,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10420;partial=true;start_range=.,1 PYKB01000687.1 Protein Homology CDS 1 991 . + 0 ID=cds-TGC93880.1;Parent=gene-C9F09_10420;Dbxref=NCBI_GP:TGC93880.1;Name=TGC93880.1;Note=protease Do%3B required at high temperature%3B degrades damaged proteins;end_range=991,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=C9F09_10420;partial=true;product=serine endoprotease;protein_id=TGC93880.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000402.1 1 991 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000402.1 Genbank region 1 991 . + . ID=PYKB01000402.1:1..991;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000402.1 Genbank gene 1 767 . - . ID=gene-C9F09_04515;Name=rnfD;gbkey=Gene;gene=rnfD;gene_biotype=protein_coding;locus_tag=C9F09_04515;partial=true;start_range=.,1 PYKB01000402.1 Protein Homology CDS 1 767 . - 0 ID=cds-TGC99589.1;Parent=gene-C9F09_04515;Dbxref=NCBI_GP:TGC99589.1;Name=TGC99589.1;Note=RnfD%3B RsxD%3B required for nitrogen fixation in Rhodobacter capsulatus%3B part of a membrane-bound complex thought to be involved in electron transport to nitrogenase%3B in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents;gbkey=CDS;gene=rnfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=C9F09_04515;partial=true;product=electron transport complex subunit RsxD;protein_id=TGC99589.1;start_range=.,1;transl_table=11 PYKB01000402.1 Genbank pseudogene 768 914 . - . ID=gene-C9F09_04520;Name=C9F09_04520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04520;pseudo=true PYKB01000402.1 Protein Homology CDS 768 914 . - 0 ID=cds-C9F09_04520;Parent=gene-C9F09_04520;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=C9F09_04520;product=electron transporter RnfC;pseudo=true;transl_table=11 PYKB01000402.1 Genbank pseudogene 899 991 . - . ID=gene-C9F09_04525;Name=C9F09_04525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04525;pseudo=true PYKB01000402.1 Protein Homology CDS 899 991 . - 0 ID=cds-C9F09_04525;Parent=gene-C9F09_04525;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_105472.1;locus_tag=C9F09_04525;product=energy transducer TonB;pseudo=true;transl_table=11 ##sequence-region PYKB01000992.1 1 991 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000992.1 Genbank region 1 991 . + . ID=PYKB01000992.1:1..991;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000992.1 Genbank pseudogene 81 991 . + . ID=gene-C9F09_16540;Name=C9F09_16540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16540;pseudo=true PYKB01000992.1 Protein Homology CDS 81 991 . + 0 ID=cds-C9F09_16540;Parent=gene-C9F09_16540;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457354.1;locus_tag=C9F09_16540;product=two-component sensor histidine kinase BarA;pseudo=true;transl_table=11 ##sequence-region PYKB01000820.1 1 7454 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000820.1 Genbank region 1 7454 . + . ID=PYKB01000820.1:1..7454;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000820.1 Genbank gene 1 301 . - . ID=gene-C9F09_12885;Name=C9F09_12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12885;partial=true;start_range=.,1 PYKB01000820.1 Protein Homology CDS 1 301 . - 0 ID=cds-TGC91814.1;Parent=gene-C9F09_12885;Dbxref=NCBI_GP:TGC91814.1;Name=TGC91814.1;Note=acts to load the DnaB helicase onto the initiation site during DNA replication;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458958.1;locus_tag=C9F09_12885;partial=true;product=DNA replication protein DnaC;protein_id=TGC91814.1;start_range=.,1;transl_table=11 PYKB01000820.1 Genbank gene 304 843 . - . ID=gene-C9F09_12890;Name=C9F09_12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12890 PYKB01000820.1 Protein Homology CDS 304 843 . - 0 ID=cds-TGC91815.1;Parent=gene-C9F09_12890;Dbxref=NCBI_GP:TGC91815.1;Name=TGC91815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458959.1;locus_tag=C9F09_12890;product=primosomal protein DnaT;protein_id=TGC91815.1;transl_table=11 PYKB01000820.1 Genbank gene 936 1409 . - . ID=gene-C9F09_12895;Name=C9F09_12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12895 PYKB01000820.1 Protein Homology CDS 936 1409 . - 0 ID=cds-TGC91816.1;Parent=gene-C9F09_12895;Dbxref=NCBI_GP:TGC91816.1;Name=TGC91816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=C9F09_12895;product=hypothetical protein;protein_id=TGC91816.1;transl_table=11 PYKB01000820.1 Genbank gene 1400 2311 . - . ID=gene-C9F09_12900;Name=C9F09_12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12900 PYKB01000820.1 Protein Homology CDS 1400 2311 . - 0 ID=cds-TGC91822.1;Parent=gene-C9F09_12900;Dbxref=NCBI_GP:TGC91822.1;Name=TGC91822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458961.1;locus_tag=C9F09_12900;product=hypothetical protein;protein_id=TGC91822.1;transl_table=11 PYKB01000820.1 Genbank gene 2888 3613 . + . ID=gene-C9F09_12905;Name=C9F09_12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12905 PYKB01000820.1 Protein Homology CDS 2888 3613 . + 0 ID=cds-TGC91817.1;Parent=gene-C9F09_12905;Dbxref=NCBI_GP:TGC91817.1;Name=TGC91817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458962.1;locus_tag=C9F09_12905;product=DNA-binding response regulator;protein_id=TGC91817.1;transl_table=11 PYKB01000820.1 Genbank gene 3574 4248 . + . ID=gene-C9F09_12910;Name=C9F09_12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12910 PYKB01000820.1 Protein Homology CDS 3574 4248 . + 0 ID=cds-TGC91818.1;Parent=gene-C9F09_12910;Dbxref=NCBI_GP:TGC91818.1;Name=TGC91818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=C9F09_12910;product=helix-turn-helix transcriptional regulator;protein_id=TGC91818.1;transl_table=11 PYKB01000820.1 Genbank gene 4299 4757 . - . ID=gene-C9F09_12915;Name=C9F09_12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12915 PYKB01000820.1 Protein Homology CDS 4299 4757 . - 0 ID=cds-TGC91819.1;Parent=gene-C9F09_12915;Dbxref=NCBI_GP:TGC91819.1;Name=TGC91819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=C9F09_12915;product=YbaK/EbsC family protein;protein_id=TGC91819.1;transl_table=11 PYKB01000820.1 Genbank gene 4908 5696 . - . ID=gene-C9F09_12920;Name=C9F09_12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12920 PYKB01000820.1 Protein Homology CDS 4908 5696 . - 0 ID=cds-TGC91820.1;Parent=gene-C9F09_12920;Dbxref=NCBI_GP:TGC91820.1;Name=TGC91820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458965.1;locus_tag=C9F09_12920;product=hydroxamate siderophore iron reductase FhuF;protein_id=TGC91820.1;transl_table=11 PYKB01000820.1 Genbank gene 5817 6881 . - . ID=gene-C9F09_12925;Name=C9F09_12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12925 PYKB01000820.1 Protein Homology CDS 5817 6881 . - 0 ID=cds-TGC91821.1;Parent=gene-C9F09_12925;Dbxref=NCBI_GP:TGC91821.1;Name=TGC91821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=C9F09_12925;product=GGDEF domain-containing protein;protein_id=TGC91821.1;transl_table=11 PYKB01000820.1 Genbank gene 7133 7369 . + . ID=gene-C9F09_12930;Name=C9F09_12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12930 PYKB01000820.1 Protein Homology CDS 7133 7369 . + 0 ID=cds-TGC91823.1;Parent=gene-C9F09_12930;Dbxref=NCBI_GP:TGC91823.1;Name=TGC91823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=C9F09_12930;product=DUF1435 domain-containing protein;protein_id=TGC91823.1;transl_table=11 ##sequence-region PYKB01000833.1 1 989 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000833.1 Genbank region 1 989 . + . ID=PYKB01000833.1:1..989;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000833.1 Genbank gene 1 255 . - . ID=gene-C9F09_13130;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=C9F09_13130;partial=true;start_range=.,1 PYKB01000833.1 Protein Homology CDS 1 255 . - 0 ID=cds-TGC91591.1;Parent=gene-C9F09_13130;Dbxref=NCBI_GP:TGC91591.1;Name=TGC91591.1;Note=outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone;gbkey=CDS;gene=lolD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455710.1;locus_tag=C9F09_13130;partial=true;product=lipoprotein-releasing system ATP-binding protein LolD;protein_id=TGC91591.1;start_range=.,1;transl_table=11 PYKB01000833.1 Genbank gene 248 989 . - . ID=gene-C9F09_13135;Name=C9F09_13135;end_range=989,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13135;partial=true PYKB01000833.1 Protein Homology CDS 248 989 . - 1 ID=cds-TGC91592.1;Parent=gene-C9F09_13135;Dbxref=NCBI_GP:TGC91592.1;Name=TGC91592.1;end_range=989,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455709.1;locus_tag=C9F09_13135;partial=true;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=TGC91592.1;transl_table=11 ##sequence-region PYKB01000366.1 1 988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000366.1 Genbank region 1 988 . + . ID=PYKB01000366.1:1..988;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000366.1 Genbank gene 1 659 . + . ID=gene-C9F09_04120;Name=C9F09_04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04120;partial=true;start_range=.,1 PYKB01000366.1 Protein Homology CDS 1 659 . + 2 ID=cds-TGD00194.1;Parent=gene-C9F09_04120;Dbxref=NCBI_GP:TGD00194.1;Name=TGD00194.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456301.1;locus_tag=C9F09_04120;partial=true;product=cytochrome d terminal oxidase subunit 1;protein_id=TGD00194.1;start_range=.,1;transl_table=11 PYKB01000366.1 Genbank pseudogene 671 985 . + . ID=gene-C9F09_04125;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=pseudogene;locus_tag=C9F09_04125;pseudo=true PYKB01000366.1 Protein Homology CDS 671 985 . + 0 ID=cds-C9F09_04125;Parent=gene-C9F09_04125;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=cydB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=C9F09_04125;product=cytochrome d ubiquinol oxidase subunit II;pseudo=true;transl_table=11 ##sequence-region PYKB01000802.1 1 988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000802.1 Genbank region 1 988 . + . ID=PYKB01000802.1:1..988;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000802.1 Genbank gene 1 363 . + . ID=gene-C9F09_12470;Name=C9F09_12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12470;partial=true;start_range=.,1 PYKB01000802.1 Protein Homology CDS 1 363 . + 0 ID=cds-TGC92136.1;Parent=gene-C9F09_12470;Dbxref=NCBI_GP:TGC92136.1;Name=TGC92136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458689.1;locus_tag=C9F09_12470;partial=true;product=phage major tail tube protein;protein_id=TGC92136.1;start_range=.,1;transl_table=11 PYKB01000802.1 Genbank gene 418 720 . + . ID=gene-C9F09_12475;Name=C9F09_12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12475 PYKB01000802.1 Protein Homology CDS 418 720 . + 0 ID=cds-TGC92137.1;Parent=gene-C9F09_12475;Dbxref=NCBI_GP:TGC92137.1;Name=TGC92137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461627.1;locus_tag=C9F09_12475;product=phage tail assembly protein;protein_id=TGC92137.1;transl_table=11 PYKB01000802.1 Genbank gene 735 854 . + . ID=gene-C9F09_12480;Name=C9F09_12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12480 PYKB01000802.1 Protein Homology CDS 735 854 . + 0 ID=cds-TGC92138.1;Parent=gene-C9F09_12480;Dbxref=NCBI_GP:TGC92138.1;Name=TGC92138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461626.1;locus_tag=C9F09_12480;product=GpE family phage tail protein;protein_id=TGC92138.1;transl_table=11 ##sequence-region PYKB01000089.1 1 983 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000089.1 Genbank region 1 983 . + . ID=PYKB01000089.1:1..983;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000089.1 Genbank gene 1 297 . + . ID=gene-C9F09_01070;Name=C9F09_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01070;partial=true;start_range=.,1 PYKB01000089.1 Protein Homology CDS 1 297 . + 0 ID=cds-TGD05679.1;Parent=gene-C9F09_01070;Dbxref=NCBI_GP:TGD05679.1;Name=TGD05679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456929.1;locus_tag=C9F09_01070;partial=true;product=multifunctional fatty acid oxidation complex subunit alpha;protein_id=TGD05679.1;start_range=.,1;transl_table=11 PYKB01000089.1 Genbank gene 506 983 . + . ID=gene-C9F09_01075;Name=sixA;end_range=983,.;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=C9F09_01075;partial=true PYKB01000089.1 Protein Homology CDS 506 983 . + 0 ID=cds-TGD05680.1;Parent=gene-C9F09_01075;Dbxref=NCBI_GP:TGD05680.1;Name=TGD05680.1;end_range=983,.;gbkey=CDS;gene=sixA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=C9F09_01075;partial=true;product=phosphohistidine phosphatase SixA;protein_id=TGD05680.1;transl_table=11 ##sequence-region PYKB01001383.1 1 982 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001383.1 Genbank region 1 982 . + . ID=PYKB01001383.1:1..982;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001383.1 Genbank gene 1 808 . - . ID=gene-C9F09_23865;Name=C9F09_23865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23865;partial=true;start_range=.,1 PYKB01001383.1 Protein Homology CDS 1 808 . - 0 ID=cds-TGC79827.1;Parent=gene-C9F09_23865;Dbxref=NCBI_GP:TGC79827.1;Name=TGC79827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456055.1;locus_tag=C9F09_23865;partial=true;product=arginine:ornithine antiporter;protein_id=TGC79827.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000721.1 1 979 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000721.1 Genbank region 1 979 . + . ID=PYKB01000721.1:1..979;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000721.1 Genbank gene 1 708 . - . ID=gene-C9F09_11030;Name=C9F09_11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11030;partial=true;start_range=.,1 PYKB01000721.1 Protein Homology CDS 1 708 . - 0 ID=cds-TGC93441.1;Parent=gene-C9F09_11030;Dbxref=NCBI_GP:TGC93441.1;Name=TGC93441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458855.1;locus_tag=C9F09_11030;partial=true;product=metalloprotease PmbA;protein_id=TGC93441.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000675.1 1 971 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000675.1 Genbank region 1 971 . + . ID=PYKB01000675.1:1..971;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000675.1 Genbank gene 148 971 . + . ID=gene-C9F09_10105;Name=C9F09_10105;end_range=971,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10105;partial=true PYKB01000675.1 Protein Homology CDS 148 971 . + 0 ID=cds-TGC94014.1;Parent=gene-C9F09_10105;Dbxref=NCBI_GP:TGC94014.1;Name=TGC94014.1;end_range=971,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457417.1;locus_tag=C9F09_10105;partial=true;product=transporter;protein_id=TGC94014.1;transl_table=11 ##sequence-region PYKB01000729.1 1 969 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000729.1 Genbank region 1 969 . + . ID=PYKB01000729.1:1..969;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000729.1 Genbank gene 1 705 . + . ID=gene-C9F09_11135;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=C9F09_11135;partial=true;start_range=.,1 PYKB01000729.1 Protein Homology CDS 1 705 . + 0 ID=cds-TGC93325.1;Parent=gene-C9F09_11135;Dbxref=NCBI_GP:TGC93325.1;Name=TGC93325.1;gbkey=CDS;gene=caiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=C9F09_11135;partial=true;product=crotonobetaine/carnitine-CoA ligase;protein_id=TGC93325.1;start_range=.,1;transl_table=11 PYKB01000729.1 Genbank gene 759 969 . + . ID=gene-C9F09_11140;Name=C9F09_11140;end_range=969,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11140;partial=true PYKB01000729.1 Protein Homology CDS 759 969 . + 0 ID=cds-TGC93326.1;Parent=gene-C9F09_11140;Dbxref=NCBI_GP:TGC93326.1;Name=TGC93326.1;Note=catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA;end_range=969,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454680.1;locus_tag=C9F09_11140;partial=true;product=carnitinyl-CoA dehydratase;protein_id=TGC93326.1;transl_table=11 ##sequence-region PYKB01000951.1 1 968 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000951.1 Genbank region 1 968 . + . ID=PYKB01000951.1:1..968;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000951.1 Genbank pseudogene 74 968 . + . ID=gene-C9F09_15730;Name=C9F09_15730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15730;pseudo=true PYKB01000951.1 Protein Homology CDS 74 968 . + 0 ID=cds-C9F09_15730;Parent=gene-C9F09_15730;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457745.1;locus_tag=C9F09_15730;product=DUF3971 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001677.1 1 967 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001677.1 Genbank region 1 967 . + . ID=PYKB01001677.1:1..967;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001677.1 Genbank gene 1 729 . + . ID=gene-C9F09_29170;Name=C9F09_29170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29170;partial=true;start_range=.,1 PYKB01001677.1 Protein Homology CDS 1 729 . + 0 ID=cds-TGC72955.1;Parent=gene-C9F09_29170;Dbxref=NCBI_GP:TGC72955.1;Name=TGC72955.1;Note=catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=C9F09_29170;partial=true;product=sorbitol-6-phosphate 2-dehydrogenase;protein_id=TGC72955.1;start_range=.,1;transl_table=11 PYKB01001677.1 Genbank pseudogene 805 882 . + . ID=gene-C9F09_29175;Name=C9F09_29175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29175;pseudo=true PYKB01001677.1 Protein Homology CDS 805 882 . + 0 ID=cds-C9F09_29175;Parent=gene-C9F09_29175;Note=regulator for glucitol utilization%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311589.1;locus_tag=C9F09_29175;product=transcriptional regulator GutM;pseudo=true;transl_table=11 ##sequence-region PYKB01001125.1 1 7438 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001125.1 Genbank region 1 7438 . + . ID=PYKB01001125.1:1..7438;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001125.1 Genbank gene 1 140 . - . ID=gene-C9F09_18905;Name=C9F09_18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18905;partial=true;start_range=.,1 PYKB01001125.1 Protein Homology CDS 1 140 . - 0 ID=cds-TGC85375.1;Parent=gene-C9F09_18905;Dbxref=NCBI_GP:TGC85375.1;Name=TGC85375.1;Note=catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457228.1;locus_tag=C9F09_18905;partial=true;product=sorbitol-6-phosphate 2-dehydrogenase;protein_id=TGC85375.1;start_range=.,1;transl_table=11 PYKB01001125.1 Genbank gene 152 514 . - . ID=gene-C9F09_18910;Name=C9F09_18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18910 PYKB01001125.1 Protein Homology CDS 152 514 . - 0 ID=cds-TGC85376.1;Parent=gene-C9F09_18910;Dbxref=NCBI_GP:TGC85376.1;Name=TGC85376.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=C9F09_18910;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=TGC85376.1;transl_table=11 PYKB01001125.1 Genbank gene 526 1497 . - . ID=gene-C9F09_18915;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=C9F09_18915 PYKB01001125.1 Protein Homology CDS 526 1497 . - 0 ID=cds-TGC85377.1;Parent=gene-C9F09_18915;Dbxref=NCBI_GP:TGC85377.1;Name=TGC85377.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;gene=srlE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=C9F09_18915;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=TGC85377.1;transl_table=11 PYKB01001125.1 Genbank gene 1494 2057 . - . ID=gene-C9F09_18920;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=C9F09_18920 PYKB01001125.1 Protein Homology CDS 1494 2057 . - 0 ID=cds-TGC85378.1;Parent=gene-C9F09_18920;Dbxref=NCBI_GP:TGC85378.1;Name=TGC85378.1;Note=catalyzes the phosphorylation of incoming sugar substrates along with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site;gbkey=CDS;gene=srlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457225.1;locus_tag=C9F09_18920;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=TGC85378.1;transl_table=11 PYKB01001125.1 Genbank gene 2310 3389 . + . ID=gene-C9F09_18925;Name=C9F09_18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18925 PYKB01001125.1 Protein Homology CDS 2310 3389 . + 0 ID=cds-TGC85379.1;Parent=gene-C9F09_18925;Dbxref=NCBI_GP:TGC85379.1;Name=TGC85379.1;Note=membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457224.1;locus_tag=C9F09_18925;product=murein transglycosylase B;protein_id=TGC85379.1;transl_table=11 PYKB01001125.1 Genbank gene 3426 3671 . - . ID=gene-C9F09_18930;Name=C9F09_18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18930 PYKB01001125.1 Protein Homology CDS 3426 3671 . - 0 ID=cds-TGC85380.1;Parent=gene-C9F09_18930;Dbxref=NCBI_GP:TGC85380.1;Name=TGC85380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=C9F09_18930;product=hypothetical protein;protein_id=TGC85380.1;transl_table=11 PYKB01001125.1 Genbank gene 3867 4364 . + . ID=gene-C9F09_18935;Name=C9F09_18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18935 PYKB01001125.1 Protein Homology CDS 3867 4364 . + 0 ID=cds-TGC85384.1;Parent=gene-C9F09_18935;Dbxref=NCBI_GP:TGC85384.1;Name=TGC85384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=C9F09_18935;product=nicotinamide-nucleotide amidase;protein_id=TGC85384.1;transl_table=11 PYKB01001125.1 Genbank gene 4449 5510 . + . ID=gene-C9F09_18940;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=C9F09_18940 PYKB01001125.1 Protein Homology CDS 4449 5510 . + 0 ID=cds-TGC85381.1;Parent=gene-C9F09_18940;Dbxref=NCBI_GP:TGC85381.1;Name=TGC85381.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457222.1;locus_tag=C9F09_18940;product=recombinase RecA;protein_id=TGC85381.1;transl_table=11 PYKB01001125.1 Genbank gene 5627 6127 . + . ID=gene-C9F09_18945;Name=C9F09_18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18945 PYKB01001125.1 Protein Homology CDS 5627 6127 . + 0 ID=cds-TGC85382.1;Parent=gene-C9F09_18945;Dbxref=NCBI_GP:TGC85382.1;Name=TGC85382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457221.1;locus_tag=C9F09_18945;product=regulatory protein RecX;protein_id=TGC85382.1;transl_table=11 PYKB01001125.1 Genbank gene 6124 6330 . + . ID=gene-C9F09_18950;Name=C9F09_18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18950 PYKB01001125.1 Protein Homology CDS 6124 6330 . + 0 ID=cds-TGC85383.1;Parent=gene-C9F09_18950;Dbxref=NCBI_GP:TGC85383.1;Name=TGC85383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277278.1;locus_tag=C9F09_18950;product=hypothetical protein;protein_id=TGC85383.1;transl_table=11 PYKB01001125.1 Genbank gene 6363 7438 . + . ID=gene-C9F09_18955;Name=alaS;end_range=7438,.;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=C9F09_18955;partial=true PYKB01001125.1 Protein Homology CDS 6363 7438 . + 0 ID=cds-TGC85385.1;Parent=gene-C9F09_18955;Dbxref=NCBI_GP:TGC85385.1;Name=TGC85385.1;end_range=7438,.;gbkey=CDS;gene=alaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=C9F09_18955;partial=true;product=alanine--tRNA ligase;protein_id=TGC85385.1;transl_table=11 ##sequence-region PYKB01000546.1 1 15209 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000546.1 Genbank region 1 15209 . + . ID=PYKB01000546.1:1..15209;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000546.1 Genbank pseudogene 59 274 . - . ID=gene-C9F09_07430;Name=C9F09_07430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07430;pseudo=true PYKB01000546.1 Protein Homology CDS 59 274 . - 0 ID=cds-C9F09_07430;Parent=gene-C9F09_07430;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308937.1;locus_tag=C9F09_07430;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000546.1 Genbank pseudogene 401 626 . + . ID=gene-C9F09_07435;Name=C9F09_07435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07435;pseudo=true PYKB01000546.1 Protein Homology CDS 401 626 . + 0 ID=cds-C9F09_07435;Parent=gene-C9F09_07435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219228.1;locus_tag=C9F09_07435;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000546.1 Genbank gene 700 2835 . + . ID=gene-C9F09_07440;Name=C9F09_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07440 PYKB01000546.1 Protein Homology CDS 700 2835 . + 0 ID=cds-TGC96584.1;Parent=gene-C9F09_07440;Dbxref=NCBI_GP:TGC96584.1;Name=TGC96584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=C9F09_07440;product=ornithine decarboxylase;protein_id=TGC96584.1;transl_table=11 PYKB01000546.1 Genbank gene 2897 4153 . - . ID=gene-C9F09_07445;Name=C9F09_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07445 PYKB01000546.1 Protein Homology CDS 2897 4153 . - 0 ID=cds-TGC96585.1;Parent=gene-C9F09_07445;Dbxref=NCBI_GP:TGC96585.1;Name=TGC96585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=C9F09_07445;product=MFS transporter;protein_id=TGC96585.1;transl_table=11 PYKB01000546.1 Genbank gene 4370 5452 . - . ID=gene-C9F09_07450;Name=C9F09_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07450 PYKB01000546.1 Protein Homology CDS 4370 5452 . - 0 ID=cds-TGC96586.1;Parent=gene-C9F09_07450;Dbxref=NCBI_GP:TGC96586.1;Name=TGC96586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417438.2;locus_tag=C9F09_07450;product=lytic murein transglycosylase;protein_id=TGC96586.1;transl_table=11 PYKB01000546.1 Genbank gene 5568 5843 . - . ID=gene-C9F09_07455;Name=C9F09_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07455 PYKB01000546.1 Protein Homology CDS 5568 5843 . - 0 ID=cds-TGC96587.1;Parent=gene-C9F09_07455;Dbxref=NCBI_GP:TGC96587.1;Name=TGC96587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457504.1;locus_tag=C9F09_07455;product=Fe(2+)-trafficking protein;protein_id=TGC96587.1;transl_table=11 PYKB01000546.1 Genbank gene 5871 6923 . - . ID=gene-C9F09_07460;Name=C9F09_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07460 PYKB01000546.1 Protein Homology CDS 5871 6923 . - 0 ID=cds-TGC96588.1;Parent=gene-C9F09_07460;Dbxref=NCBI_GP:TGC96588.1;Name=TGC96588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457503.1;locus_tag=C9F09_07460;product=adenine DNA glycosylase;protein_id=TGC96588.1;transl_table=11 PYKB01000546.1 Genbank pseudogene 6844 6998 . - . ID=gene-C9F09_07465;Name=C9F09_07465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07465;pseudo=true PYKB01000546.1 Protein Homology CDS 6844 6998 . - 0 ID=cds-C9F09_07465;Parent=gene-C9F09_07465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297405.1;locus_tag=C9F09_07465;product=adenine glycosylase;pseudo=true;transl_table=11 PYKB01000546.1 Genbank gene 7078 7797 . + . ID=gene-C9F09_07470;Name=C9F09_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07470 PYKB01000546.1 Protein Homology CDS 7078 7797 . + 0 ID=cds-TGC96589.1;Parent=gene-C9F09_07470;Dbxref=NCBI_GP:TGC96589.1;Name=TGC96589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457502.1;locus_tag=C9F09_07470;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=TGC96589.1;transl_table=11 PYKB01000546.1 Genbank gene 7797 8123 . + . ID=gene-C9F09_07475;Name=C9F09_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07475 PYKB01000546.1 Protein Homology CDS 7797 8123 . + 0 ID=cds-TGC96590.1;Parent=gene-C9F09_07475;Dbxref=NCBI_GP:TGC96590.1;Name=TGC96590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=C9F09_07475;product=hypothetical protein;protein_id=TGC96590.1;transl_table=11 PYKB01000546.1 Genbank gene 8173 8892 . + . ID=gene-C9F09_07480;Name=C9F09_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07480 PYKB01000546.1 Protein Homology CDS 8173 8892 . + 0 ID=cds-TGC96591.1;Parent=gene-C9F09_07480;Dbxref=NCBI_GP:TGC96591.1;Name=TGC96591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=C9F09_07480;product=hypothetical protein;protein_id=TGC96591.1;transl_table=11 PYKB01000546.1 Genbank gene 9081 10127 . + . ID=gene-C9F09_07485;Name=C9F09_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07485 PYKB01000546.1 Protein Homology CDS 9081 10127 . + 0 ID=cds-TGC96592.1;Parent=gene-C9F09_07485;Dbxref=NCBI_GP:TGC96592.1;Name=TGC96592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457498.1;locus_tag=C9F09_07485;product=L-asparaginase 2;protein_id=TGC96592.1;transl_table=11 PYKB01000546.1 Genbank gene 10260 11267 . + . ID=gene-C9F09_07490;Name=C9F09_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07490 PYKB01000546.1 Protein Homology CDS 10260 11267 . + 0 ID=cds-TGC96593.1;Parent=gene-C9F09_07490;Dbxref=NCBI_GP:TGC96593.1;Name=TGC96593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457497.1;locus_tag=C9F09_07490;product=DUF1202 domain-containing protein;protein_id=TGC96593.1;transl_table=11 PYKB01000546.1 Genbank gene 11359 12495 . - . ID=gene-C9F09_07495;Name=C9F09_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07495 PYKB01000546.1 Protein Homology CDS 11359 12495 . - 0 ID=cds-TGC96594.1;Parent=gene-C9F09_07495;Dbxref=NCBI_GP:TGC96594.1;Name=TGC96594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457496.1;locus_tag=C9F09_07495;product=YggW family oxidoreductase;protein_id=TGC96594.1;transl_table=11 PYKB01000546.1 Genbank gene 12488 13081 . - . ID=gene-C9F09_07500;Name=C9F09_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07500 PYKB01000546.1 Protein Homology CDS 12488 13081 . - 0 ID=cds-TGC96595.1;Parent=gene-C9F09_07500;Dbxref=NCBI_GP:TGC96595.1;Name=TGC96595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=C9F09_07500;product=non-canonical purine NTP pyrophosphatase;protein_id=TGC96595.1;transl_table=11 PYKB01000546.1 Genbank gene 13089 13379 . - . ID=gene-C9F09_07505;Name=C9F09_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07505 PYKB01000546.1 Protein Homology CDS 13089 13379 . - 0 ID=cds-TGC96596.1;Parent=gene-C9F09_07505;Dbxref=NCBI_GP:TGC96596.1;Name=TGC96596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457494.1;locus_tag=C9F09_07505;product=YggU family protein;protein_id=TGC96596.1;transl_table=11 PYKB01000546.1 Genbank gene 13376 13942 . - . ID=gene-C9F09_07510;Name=C9F09_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07510 PYKB01000546.1 Protein Homology CDS 13376 13942 . - 0 ID=cds-TGC96597.1;Parent=gene-C9F09_07510;Dbxref=NCBI_GP:TGC96597.1;Name=TGC96597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457493.1;locus_tag=C9F09_07510;product=YggT family protein;protein_id=TGC96597.1;transl_table=11 PYKB01000546.1 Genbank gene 13961 14665 . - . ID=gene-C9F09_07515;Name=C9F09_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07515 PYKB01000546.1 Protein Homology CDS 13961 14665 . - 0 ID=cds-TGC96598.1;Parent=gene-C9F09_07515;Dbxref=NCBI_GP:TGC96598.1;Name=TGC96598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457492.1;locus_tag=C9F09_07515;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=TGC96598.1;transl_table=11 PYKB01000546.1 Genbank pseudogene 14683 15168 . + . ID=gene-C9F09_07520;Name=C9F09_07520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07520;pseudo=true PYKB01000546.1 Protein Homology CDS 14683 15168 . + 0 ID=cds-C9F09_07520;Parent=gene-C9F09_07520;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457491.1;locus_tag=C9F09_07520;product=type IV pili twitching motility protein PilT;pseudo=true;transl_table=11 ##sequence-region PYKB01000706.1 1 967 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000706.1 Genbank region 1 967 . + . ID=PYKB01000706.1:1..967;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000706.1 Genbank pseudogene 76 967 . - . ID=gene-C9F09_10745;Name=C9F09_10745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10745;pseudo=true PYKB01000706.1 Protein Homology CDS 76 967 . - 1 ID=cds-C9F09_10745;Parent=gene-C9F09_10745;Note=involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457817.1;locus_tag=C9F09_10745;product=amino acid permease;pseudo=true;transl_table=11 ##sequence-region PYKB01001644.1 1 966 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001644.1 Genbank region 1 966 . + . ID=PYKB01001644.1:1..966;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001644.1 Genbank gene 1 966 . + . ID=gene-C9F09_28720;Name=C9F09_28720;end_range=966,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28720;partial=true;start_range=.,1 PYKB01001644.1 Protein Homology CDS 1 966 . + 1 ID=cds-TGC73699.1;Parent=gene-C9F09_28720;Dbxref=NCBI_GP:TGC73699.1;Name=TGC73699.1;end_range=966,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9F09_28720;partial=true;product=hypothetical protein;protein_id=TGC73699.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001477.1 1 966 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001477.1 Genbank region 1 966 . + . ID=PYKB01001477.1:1..966;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001477.1 Genbank pseudogene 1 889 . + . ID=gene-C9F09_25690;Name=C9F09_25690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_25690;pseudo=true PYKB01001477.1 Protein Homology CDS 1 889 . + 1 ID=cds-C9F09_25690;Parent=gene-C9F09_25690;Note=involved in the processing of the 5'end of 16S rRNA%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=C9F09_25690;product=Rne/Rng family ribonuclease;pseudo=true;transl_table=11 ##sequence-region PYKB01001310.1 1 966 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001310.1 Genbank region 1 966 . + . ID=PYKB01001310.1:1..966;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001310.1 Genbank gene 1 728 . - . ID=gene-C9F09_22505;Name=C9F09_22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22505;partial=true;start_range=.,1 PYKB01001310.1 Protein Homology CDS 1 728 . - 0 ID=cds-TGC81367.1;Parent=gene-C9F09_22505;Dbxref=NCBI_GP:TGC81367.1;Name=TGC81367.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455432.1;locus_tag=C9F09_22505;partial=true;product=macrolide ABC transporter permease/ATP-binding protein MacB;protein_id=TGC81367.1;start_range=.,1;transl_table=11 PYKB01001310.1 Genbank gene 725 966 . - . ID=gene-C9F09_22510;Name=C9F09_22510;end_range=966,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22510;partial=true PYKB01001310.1 Protein Homology CDS 725 966 . - 2 ID=cds-TGC81368.1;Parent=gene-C9F09_22510;Dbxref=NCBI_GP:TGC81368.1;Name=TGC81368.1;Note=confers macrolide resistance via active drug efflux;end_range=966,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455431.1;locus_tag=C9F09_22510;partial=true;product=macrolide transporter subunit MacA;protein_id=TGC81368.1;transl_table=11 ##sequence-region PYKB01001740.1 1 964 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001740.1 Genbank region 1 964 . + . ID=PYKB01001740.1:1..964;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001740.1 Genbank gene 32 709 . + . ID=gene-C9F09_30510;Name=C9F09_30510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30510 PYKB01001740.1 Protein Homology CDS 32 709 . + 0 ID=cds-TGC70746.1;Parent=gene-C9F09_30510;Dbxref=NCBI_GP:TGC70746.1;Name=TGC70746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=C9F09_30510;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=TGC70746.1;transl_table=11 PYKB01001740.1 Genbank gene 714 964 . + . ID=gene-C9F09_30515;Name=C9F09_30515;end_range=964,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30515;partial=true PYKB01001740.1 Protein Homology CDS 714 964 . + 0 ID=cds-TGC70747.1;Parent=gene-C9F09_30515;Dbxref=NCBI_GP:TGC70747.1;Name=TGC70747.1;Note=catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis;end_range=964,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457822.1;locus_tag=C9F09_30515;partial=true;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=TGC70747.1;transl_table=11 ##sequence-region PYKB01001324.1 1 962 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001324.1 Genbank region 1 962 . + . ID=PYKB01001324.1:1..962;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001324.1 Genbank gene 1 437 . + . ID=gene-C9F09_22715;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=C9F09_22715;partial=true;start_range=.,1 PYKB01001324.1 Protein Homology CDS 1 437 . + 2 ID=cds-TGC81056.1;Parent=gene-C9F09_22715;Dbxref=NCBI_GP:TGC81056.1;Name=TGC81056.1;Note=catalyzes the uptake of putrescine via a proton symport mechanism%2C as well as the efflux of putrescine by a putrescine/ornithine antiport system;gbkey=CDS;gene=potE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=C9F09_22715;partial=true;product=putrescine-ornithine antiporter;protein_id=TGC81056.1;start_range=.,1;transl_table=11 PYKB01001324.1 Genbank gene 502 962 . + . ID=gene-C9F09_22720;Name=C9F09_22720;end_range=962,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22720;partial=true PYKB01001324.1 Protein Homology CDS 502 962 . + 0 ID=cds-TGC81057.1;Parent=gene-C9F09_22720;Dbxref=NCBI_GP:TGC81057.1;Name=TGC81057.1;end_range=962,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=C9F09_22720;partial=true;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=TGC81057.1;transl_table=11 ##sequence-region PYKB01000005.1 1 960 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000005.1 Genbank region 1 960 . + . ID=PYKB01000005.1:1..960;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000005.1 Genbank gene 1 209 . - . ID=gene-C9F09_00025;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=C9F09_00025;partial=true;start_range=.,1 PYKB01000005.1 Protein Homology CDS 1 209 . - 0 ID=cds-TGD07299.1;Parent=gene-C9F09_00025;Dbxref=NCBI_GP:TGD07299.1;Name=TGD07299.1;Note=N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;gbkey=CDS;gene=murG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=C9F09_00025;partial=true;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=TGD07299.1;start_range=.,1;transl_table=11 PYKB01000005.1 Genbank pseudogene 206 871 . - . ID=gene-C9F09_00030;Name=C9F09_00030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00030;pseudo=true PYKB01000005.1 Protein Homology CDS 206 871 . - 0 ID=cds-C9F09_00030;Parent=gene-C9F09_00030;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454739.1;locus_tag=C9F09_00030;product=cell division protein FtsW;pseudo=true;transl_table=11 ##sequence-region PYKB01000991.1 1 957 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000991.1 Genbank region 1 957 . + . ID=PYKB01000991.1:1..957;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000991.1 Genbank pseudogene 69 803 . - . ID=gene-C9F09_16530;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=pseudogene;locus_tag=C9F09_16530;pseudo=true PYKB01000991.1 Protein Homology CDS 69 803 . - 0 ID=cds-C9F09_16530;Parent=gene-C9F09_16530;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=glpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456829.1;locus_tag=C9F09_16530;product=anaerobic glycerol-3-phosphate dehydrogenase subunit C;pseudo=true;transl_table=11 PYKB01000991.1 Genbank gene 800 957 . - . ID=gene-C9F09_16535;Name=C9F09_16535;end_range=957,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16535;partial=true PYKB01000991.1 Protein Homology CDS 800 957 . - 2 ID=cds-TGC88341.1;Parent=gene-C9F09_16535;Dbxref=NCBI_GP:TGC88341.1;Name=TGC88341.1;Note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters;end_range=957,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456828.1;locus_tag=C9F09_16535;partial=true;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=TGC88341.1;transl_table=11 ##sequence-region PYKB01001675.1 1 957 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001675.1 Genbank region 1 957 . + . ID=PYKB01001675.1:1..957;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001675.1 Genbank gene 1 653 . + . ID=gene-C9F09_29145;Name=C9F09_29145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29145;partial=true;start_range=.,1 PYKB01001675.1 Protein Homology CDS 1 653 . + 2 ID=cds-TGC72990.1;Parent=gene-C9F09_29145;Dbxref=NCBI_GP:TGC72990.1;Name=TGC72990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=C9F09_29145;partial=true;product=fimbrial protein StiH;protein_id=TGC72990.1;start_range=.,1;transl_table=11 PYKB01001675.1 Genbank pseudogene 773 901 . - . ID=gene-C9F09_29150;Name=C9F09_29150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29150;pseudo=true PYKB01001675.1 Protein Homology CDS 773 901 . - 0 ID=cds-C9F09_29150;Parent=gene-C9F09_29150;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=C9F09_29150;product=ABC transporter permease;pseudo=true;transl_table=11 ##sequence-region PYKB01000745.1 1 956 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000745.1 Genbank region 1 956 . + . ID=PYKB01000745.1:1..956;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000745.1 Genbank gene 1 756 . - . ID=gene-C9F09_11480;Name=C9F09_11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11480;partial=true;start_range=.,1 PYKB01000745.1 Protein Homology CDS 1 756 . - 0 ID=cds-TGC92996.1;Parent=gene-C9F09_11480;Dbxref=NCBI_GP:TGC92996.1;Name=TGC92996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455915.1;locus_tag=C9F09_11480;partial=true;product=hypothetical protein;protein_id=TGC92996.1;start_range=.,1;transl_table=11 PYKB01000745.1 Genbank gene 753 950 . - . ID=gene-C9F09_11485;Name=C9F09_11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11485 PYKB01000745.1 Protein Homology CDS 753 950 . - 0 ID=cds-TGC92997.1;Parent=gene-C9F09_11485;Dbxref=NCBI_GP:TGC92997.1;Name=TGC92997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001767506.1;locus_tag=C9F09_11485;product=hypothetical protein;protein_id=TGC92997.1;transl_table=11 ##sequence-region PYKB01000223.1 1 7408 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000223.1 Genbank region 1 7408 . + . ID=PYKB01000223.1:1..7408;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000223.1 Genbank pseudogene 64 453 . + . ID=gene-C9F09_02385;Name=C9F09_02385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02385;pseudo=true PYKB01000223.1 Protein Homology CDS 64 453 . + 0 ID=cds-C9F09_02385;Parent=gene-C9F09_02385;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=C9F09_02385;product=formate dehydrogenase accessory sulfurtransferase FdhD;pseudo=true;transl_table=11 PYKB01000223.1 Genbank gene 729 1760 . - . ID=gene-C9F09_02390;Name=C9F09_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02390 PYKB01000223.1 Protein Homology CDS 729 1760 . - 0 ID=cds-TGD03261.1;Parent=gene-C9F09_02390;Dbxref=NCBI_GP:TGD03261.1;Name=TGD03261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462919.1;locus_tag=C9F09_02390;product=DUF3829 domain-containing protein;protein_id=TGD03261.1;transl_table=11 PYKB01000223.1 Genbank gene 1943 3043 . + . ID=gene-C9F09_02395;Name=C9F09_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02395 PYKB01000223.1 Protein Homology CDS 1943 3043 . + 0 ID=cds-TGD03262.1;Parent=gene-C9F09_02395;Dbxref=NCBI_GP:TGD03262.1;Name=TGD03262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462920.2;locus_tag=C9F09_02395;product=DUF3829 domain-containing protein;protein_id=TGD03262.1;transl_table=11 PYKB01000223.1 Genbank gene 3398 3721 . - . ID=gene-C9F09_02400;Name=C9F09_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02400 PYKB01000223.1 Protein Homology CDS 3398 3721 . - 0 ID=cds-TGD03263.1;Parent=gene-C9F09_02400;Dbxref=NCBI_GP:TGD03263.1;Name=TGD03263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=C9F09_02400;product=AzlD domain-containing protein;protein_id=TGD03263.1;transl_table=11 PYKB01000223.1 Genbank gene 3721 4380 . - . ID=gene-C9F09_02405;Name=C9F09_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02405 PYKB01000223.1 Protein Homology CDS 3721 4380 . - 0 ID=cds-TGD03264.1;Parent=gene-C9F09_02405;Dbxref=NCBI_GP:TGD03264.1;Name=TGD03264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458008.1;locus_tag=C9F09_02405;product=branched-chain amino acid ABC transporter permease;protein_id=TGD03264.1;transl_table=11 PYKB01000223.1 Genbank gene 4463 5029 . + . ID=gene-C9F09_02410;Name=C9F09_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02410 PYKB01000223.1 Protein Homology CDS 4463 5029 . + 0 ID=cds-TGD03267.1;Parent=gene-C9F09_02410;Dbxref=NCBI_GP:TGD03267.1;Name=TGD03267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462923.1;locus_tag=C9F09_02410;product=XRE family transcriptional regulator;protein_id=TGD03267.1;transl_table=11 PYKB01000223.1 Genbank gene 5118 5432 . - . ID=gene-C9F09_02415;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=C9F09_02415 PYKB01000223.1 Protein Homology CDS 5118 5432 . - 0 ID=cds-TGD03265.1;Parent=gene-C9F09_02415;Dbxref=NCBI_GP:TGD03265.1;Name=TGD03265.1;gbkey=CDS;gene=rhaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458006.1;locus_tag=C9F09_02415;product=L-rhamnose mutarotase;protein_id=TGD03265.1;transl_table=11 PYKB01000223.1 Genbank gene 5429 6577 . - . ID=gene-C9F09_02420;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=C9F09_02420 PYKB01000223.1 Protein Homology CDS 5429 6577 . - 0 ID=cds-TGD03266.1;Parent=gene-C9F09_02420;Dbxref=NCBI_GP:TGD03266.1;Name=TGD03266.1;gbkey=CDS;gene=fucO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458005.1;locus_tag=C9F09_02420;product=lactaldehyde reductase;protein_id=TGD03266.1;transl_table=11 PYKB01000223.1 Genbank gene 6704 7408 . - . ID=gene-C9F09_02425;Name=C9F09_02425;end_range=7408,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02425;partial=true PYKB01000223.1 Protein Homology CDS 6704 7408 . - 0 ID=cds-TGD03268.1;Parent=gene-C9F09_02425;Dbxref=NCBI_GP:TGD03268.1;Name=TGD03268.1;end_range=7408,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=C9F09_02425;partial=true;product=rhamnulose-1-phosphate aldolase;protein_id=TGD03268.1;transl_table=11 ##sequence-region PYKB01001152.1 1 954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001152.1 Genbank region 1 954 . + . ID=PYKB01001152.1:1..954;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001152.1 Genbank gene 1 954 . + . ID=gene-C9F09_19470;Name=C9F09_19470;end_range=954,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19470;partial=true;start_range=.,1 PYKB01001152.1 Protein Homology CDS 1 954 . + 0 ID=cds-TGC84674.1;Parent=gene-C9F09_19470;Dbxref=NCBI_GP:TGC84674.1;Name=TGC84674.1;end_range=954,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=C9F09_19470;partial=true;product=family 31 glucosidase;protein_id=TGC84674.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000090.1 1 951 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000090.1 Genbank region 1 951 . + . ID=PYKB01000090.1:1..951;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000090.1 Genbank gene 1 411 . + . ID=gene-C9F09_01080;Name=C9F09_01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01080;partial=true;start_range=.,1 PYKB01000090.1 Protein Homology CDS 1 411 . + 0 ID=cds-TGD05666.1;Parent=gene-C9F09_01080;Dbxref=NCBI_GP:TGD05666.1;Name=TGD05666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=C9F09_01080;partial=true;product=DUF421 domain-containing protein;protein_id=TGD05666.1;start_range=.,1;transl_table=11 PYKB01000090.1 Genbank pseudogene 597 908 . + . ID=gene-C9F09_01085;Name=C9F09_01085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01085;pseudo=true PYKB01000090.1 Protein Homology CDS 597 908 . + 0 ID=cds-C9F09_01085;Parent=gene-C9F09_01085;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057138.1;locus_tag=C9F09_01085;product=phosphoserine transaminase;pseudo=true;transl_table=11 ##sequence-region PYKB01001143.1 1 949 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001143.1 Genbank region 1 949 . + . ID=PYKB01001143.1:1..949;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001143.1 Genbank gene 104 949 . + . ID=gene-C9F09_19340;Name=C9F09_19340;end_range=949,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19340;partial=true PYKB01001143.1 Protein Homology CDS 104 949 . + 0 ID=cds-TGC84849.1;Parent=gene-C9F09_19340;Dbxref=NCBI_GP:TGC84849.1;Name=TGC84849.1;end_range=949,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=C9F09_19340;partial=true;product=lipid III flippase WzxE;protein_id=TGC84849.1;transl_table=11 ##sequence-region PYKB01000247.1 1 946 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000247.1 Genbank region 1 946 . + . ID=PYKB01000247.1:1..946;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000247.1 Genbank gene 1 500 . + . ID=gene-C9F09_02710;Name=C9F09_02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02710;partial=true;start_range=.,1 PYKB01000247.1 Protein Homology CDS 1 500 . + 2 ID=cds-TGD02595.1;Parent=gene-C9F09_02710;Dbxref=NCBI_GP:TGD02595.1;Name=TGD02595.1;Note=catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457460.1;locus_tag=C9F09_02710;partial=true;product=phosphoglycerate dehydrogenase;protein_id=TGD02595.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001689.1 1 943 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001689.1 Genbank region 1 943 . + . ID=PYKB01001689.1:1..943;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001689.1 Genbank gene 1 943 . - . ID=gene-C9F09_29450;Name=foxA;end_range=943,.;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=C9F09_29450;partial=true;start_range=.,1 PYKB01001689.1 Protein Homology CDS 1 943 . - 0 ID=cds-TGC72464.1;Parent=gene-C9F09_29450;Dbxref=NCBI_GP:TGC72464.1;Name=TGC72464.1;end_range=943,.;gbkey=CDS;gene=foxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454959.1;locus_tag=C9F09_29450;partial=true;product=ferrioxamine B receptor FoxA;protein_id=TGC72464.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000134.1 1 940 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000134.1 Genbank region 1 940 . + . ID=PYKB01000134.1:1..940;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000134.1 Genbank pseudogene 1 903 . - . ID=gene-C9F09_01545;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=pseudogene;locus_tag=C9F09_01545;pseudo=true PYKB01000134.1 Protein Homology CDS 1 903 . - 0 ID=cds-C9F09_01545;Parent=gene-C9F09_01545;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455988.1;locus_tag=C9F09_01545;product=osmoprotectant ABC transporter ATP-binding protein OsmV;pseudo=true;transl_table=11 ##sequence-region PYKB01001340.1 1 938 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001340.1 Genbank region 1 938 . + . ID=PYKB01001340.1:1..938;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001340.1 Genbank gene 1 531 . - . ID=gene-C9F09_23070;Name=C9F09_23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23070;partial=true;start_range=.,1 PYKB01001340.1 Protein Homology CDS 1 531 . - 0 ID=cds-TGC80724.1;Parent=gene-C9F09_23070;Dbxref=NCBI_GP:TGC80724.1;Name=TGC80724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=C9F09_23070;partial=true;product=glycoside hydrolase 105 family protein;protein_id=TGC80724.1;start_range=.,1;transl_table=11 PYKB01001340.1 Genbank gene 768 938 . - . ID=gene-C9F09_23075;Name=C9F09_23075;end_range=938,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23075;partial=true PYKB01001340.1 Protein Homology CDS 768 938 . - 0 ID=cds-TGC80725.1;Parent=gene-C9F09_23075;Dbxref=NCBI_GP:TGC80725.1;Name=TGC80725.1;end_range=938,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456478.1;locus_tag=C9F09_23075;partial=true;product=flagellar protein FlhE;protein_id=TGC80725.1;transl_table=11 ##sequence-region PYKB01000616.1 1 938 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000616.1 Genbank region 1 938 . + . ID=PYKB01000616.1:1..938;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000616.1 Genbank pseudogene 64 903 . + . ID=gene-C9F09_09140;Name=C9F09_09140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_09140;pseudo=true PYKB01000616.1 Protein Homology CDS 64 903 . + 0 ID=cds-C9F09_09140;Parent=gene-C9F09_09140;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455701.1;locus_tag=C9F09_09140;product=beta-N-acetylhexosaminidase;pseudo=true;transl_table=11 ##sequence-region PYKB01000936.1 1 937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000936.1 Genbank region 1 937 . + . ID=PYKB01000936.1:1..937;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000936.1 Genbank pseudogene 62 430 . + . ID=gene-C9F09_15470;Name=C9F09_15470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15470;pseudo=true PYKB01000936.1 Protein Homology CDS 62 430 . + 0 ID=cds-C9F09_15470;Parent=gene-C9F09_15470;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551832.1;locus_tag=C9F09_15470;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 PYKB01000936.1 Genbank gene 701 937 . - . ID=gene-C9F09_15475;Name=C9F09_15475;end_range=937,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15475;partial=true PYKB01000936.1 Protein Homology CDS 701 937 . - 0 ID=cds-TGC89615.1;Parent=gene-C9F09_15475;Dbxref=NCBI_GP:TGC89615.1;Name=TGC89615.1;Note=B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm;end_range=937,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=C9F09_15475;partial=true;product=cytochrome B;protein_id=TGC89615.1;transl_table=11 ##sequence-region PYKB01000903.1 1 936 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000903.1 Genbank region 1 936 . + . ID=PYKB01000903.1:1..936;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000903.1 Genbank gene 1 653 . - . ID=gene-C9F09_14865;Name=cobJ;gbkey=Gene;gene=cobJ;gene_biotype=protein_coding;locus_tag=C9F09_14865;partial=true;start_range=.,1 PYKB01000903.1 Protein Homology CDS 1 653 . - 0 ID=cds-TGC90097.1;Parent=gene-C9F09_14865;Dbxref=NCBI_GP:TGC90097.1;Name=TGC90097.1;gbkey=CDS;gene=cobJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456578.1;locus_tag=C9F09_14865;partial=true;product=precorrin-3B C(17)-methyltransferase;protein_id=TGC90097.1;start_range=.,1;transl_table=11 PYKB01000903.1 Genbank pseudogene 653 936 . - . ID=gene-C9F09_14870;Name=C9F09_14870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_14870;pseudo=true PYKB01000903.1 Protein Homology CDS 653 936 . - 2 ID=cds-C9F09_14870;Parent=gene-C9F09_14870;Note=catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=C9F09_14870;product=cobalamin biosynthesis protein CbiG;pseudo=true;transl_table=11 ##sequence-region PYKB01000848.1 1 7395 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000848.1 Genbank region 1 7395 . + . ID=PYKB01000848.1:1..7395;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000848.1 Genbank gene 1 960 . + . ID=gene-C9F09_13490;Name=C9F09_13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13490;partial=true;start_range=.,1 PYKB01000848.1 Protein Homology CDS 1 960 . + 0 ID=cds-TGC91287.1;Parent=gene-C9F09_13490;Dbxref=NCBI_GP:TGC91287.1;Name=TGC91287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=C9F09_13490;partial=true;product=hypothetical protein;protein_id=TGC91287.1;start_range=.,1;transl_table=11 PYKB01000848.1 Genbank gene 1024 2022 . + . ID=gene-C9F09_13495;Name=C9F09_13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13495 PYKB01000848.1 Protein Homology CDS 1024 2022 . + 0 ID=cds-TGC91288.1;Parent=gene-C9F09_13495;Dbxref=NCBI_GP:TGC91288.1;Name=TGC91288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=C9F09_13495;product=transcriptional regulator;protein_id=TGC91288.1;transl_table=11 PYKB01000848.1 Genbank gene 2240 3322 . - . ID=gene-C9F09_13500;Name=C9F09_13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13500 PYKB01000848.1 Protein Homology CDS 2240 3322 . - 0 ID=cds-TGC91289.1;Parent=gene-C9F09_13500;Dbxref=NCBI_GP:TGC91289.1;Name=TGC91289.1;Note=with LptABCF is involved in the transport of lipopolysaccharides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=C9F09_13500;product=LPS export ABC transporter permease LptG;protein_id=TGC91289.1;transl_table=11 PYKB01000848.1 Genbank gene 3322 4422 . - . ID=gene-C9F09_13505;Name=C9F09_13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13505 PYKB01000848.1 Protein Homology CDS 3322 4422 . - 0 ID=cds-TGC91290.1;Parent=gene-C9F09_13505;Dbxref=NCBI_GP:TGC91290.1;Name=TGC91290.1;Note=with LptBGC is involved in lipopolysaccharide export;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458896.1;locus_tag=C9F09_13505;product=LPS export ABC transporter permease LptF;protein_id=TGC91290.1;transl_table=11 PYKB01000848.1 Genbank pseudogene 4385 4580 . + . ID=gene-C9F09_13510;Name=C9F09_13510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13510;pseudo=true PYKB01000848.1 Protein Homology CDS 4385 4580 . + 0 ID=cds-C9F09_13510;Parent=gene-C9F09_13510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134316.1;locus_tag=C9F09_13510;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000848.1 Genbank gene 4654 4773 . + . ID=gene-C9F09_13515;Name=C9F09_13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13515 PYKB01000848.1 Protein Homology CDS 4654 4773 . + 0 ID=cds-TGC91291.1;Parent=gene-C9F09_13515;Dbxref=NCBI_GP:TGC91291.1;Name=TGC91291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463338.1;locus_tag=C9F09_13515;product=hypothetical protein;protein_id=TGC91291.1;transl_table=11 PYKB01000848.1 Genbank gene 4817 6328 . + . ID=gene-C9F09_13520;Name=C9F09_13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13520 PYKB01000848.1 Protein Homology CDS 4817 6328 . + 0 ID=cds-TGC91292.1;Parent=gene-C9F09_13520;Dbxref=NCBI_GP:TGC91292.1;Name=TGC91292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=C9F09_13520;product=cytosol aminopeptidase;protein_id=TGC91292.1;transl_table=11 PYKB01000848.1 Genbank gene 6426 6908 . + . ID=gene-C9F09_13525;Name=C9F09_13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13525 PYKB01000848.1 Protein Homology CDS 6426 6908 . + 0 ID=cds-TGC91293.1;Parent=gene-C9F09_13525;Dbxref=NCBI_GP:TGC91293.1;Name=TGC91293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458894.1;locus_tag=C9F09_13525;product=DNA polymerase III subunit chi;protein_id=TGC91293.1;transl_table=11 PYKB01000848.1 Genbank gene 6908 7395 . + . ID=gene-C9F09_13530;Name=C9F09_13530;end_range=7395,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13530;partial=true PYKB01000848.1 Protein Homology CDS 6908 7395 . + 0 ID=cds-TGC91294.1;Parent=gene-C9F09_13530;Dbxref=NCBI_GP:TGC91294.1;Name=TGC91294.1;end_range=7395,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=C9F09_13530;partial=true;product=valine--tRNA ligase;protein_id=TGC91294.1;transl_table=11 ##sequence-region PYKB01000203.1 1 936 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000203.1 Genbank region 1 936 . + . ID=PYKB01000203.1:1..936;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000203.1 Genbank pseudogene 81 533 . + . ID=gene-C9F09_02225;Name=C9F09_02225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02225;pseudo=true PYKB01000203.1 Protein Homology CDS 81 533 . + 0 ID=cds-C9F09_02225;Parent=gene-C9F09_02225;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=C9F09_02225;product=alcohol dehydrogenase;pseudo=true;transl_table=11 PYKB01000203.1 Genbank pseudogene 560 936 . + . ID=gene-C9F09_02230;Name=C9F09_02230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02230;pseudo=true PYKB01000203.1 Protein Homology CDS 560 936 . + 0 ID=cds-C9F09_02230;Parent=gene-C9F09_02230;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=C9F09_02230;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKB01000765.1 1 933 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000765.1 Genbank region 1 933 . + . ID=PYKB01000765.1:1..933;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000765.1 Genbank gene 1 843 . - . ID=gene-C9F09_11870;Name=C9F09_11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11870;partial=true;start_range=.,1 PYKB01000765.1 Protein Homology CDS 1 843 . - 0 ID=cds-TGC92669.1;Parent=gene-C9F09_11870;Dbxref=NCBI_GP:TGC92669.1;Name=TGC92669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=C9F09_11870;partial=true;product=Bcr/CflA family drug resistance efflux transporter;protein_id=TGC92669.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000152.1 1 933 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000152.1 Genbank region 1 933 . + . ID=PYKB01000152.1:1..933;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000152.1 Genbank gene 1 933 . - . ID=gene-C9F09_01715;Name=C9F09_01715;end_range=933,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01715;partial=true;start_range=.,1 PYKB01000152.1 Protein Homology CDS 1 933 . - 0 ID=cds-TGD04492.1;Parent=gene-C9F09_01715;Dbxref=NCBI_GP:TGD04492.1;Name=TGD04492.1;end_range=933,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=C9F09_01715;partial=true;product=autotransporter adhesin BigA;protein_id=TGD04492.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000545.1 1 931 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000545.1 Genbank region 1 931 . + . ID=PYKB01000545.1:1..931;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000545.1 Genbank gene 1 148 . + . ID=gene-C9F09_07420;Name=C9F09_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07420;partial=true;start_range=.,1 PYKB01000545.1 Protein Homology CDS 1 148 . + 1 ID=cds-TGC96625.1;Parent=gene-C9F09_07420;Dbxref=NCBI_GP:TGC96625.1;Name=TGC96625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454849.1;locus_tag=C9F09_07420;partial=true;product=copper homeostasis/adhesion lipoprotein NlpE;protein_id=TGC96625.1;start_range=.,1;transl_table=11 PYKB01000545.1 Genbank gene 222 931 . - . ID=gene-C9F09_07425;Name=proS;end_range=931,.;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=C9F09_07425;partial=true PYKB01000545.1 Protein Homology CDS 222 931 . - 2 ID=cds-TGC96626.1;Parent=gene-C9F09_07425;Dbxref=NCBI_GP:TGC96626.1;Name=TGC96626.1;end_range=931,.;gbkey=CDS;gene=proS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454851.1;locus_tag=C9F09_07425;partial=true;product=proline--tRNA ligase;protein_id=TGC96626.1;transl_table=11 ##sequence-region PYKB01001632.1 1 931 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001632.1 Genbank region 1 931 . + . ID=PYKB01001632.1:1..931;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001632.1 Genbank gene 1 294 . + . ID=gene-C9F09_28500;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=C9F09_28500;partial=true;start_range=.,1 PYKB01001632.1 Protein Homology CDS 1 294 . + 0 ID=cds-TGC74005.1;Parent=gene-C9F09_28500;Dbxref=NCBI_GP:TGC74005.1;Name=TGC74005.1;gbkey=CDS;gene=tssJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454883.1;locus_tag=C9F09_28500;partial=true;product=type VI secretion system lipoprotein TssJ;protein_id=TGC74005.1;start_range=.,1;transl_table=11 PYKB01001632.1 Genbank gene 298 931 . + . ID=gene-C9F09_28505;Name=C9F09_28505;end_range=931,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28505;partial=true PYKB01001632.1 Protein Homology CDS 298 931 . + 0 ID=cds-TGC74006.1;Parent=gene-C9F09_28505;Dbxref=NCBI_GP:TGC74006.1;Name=TGC74006.1;end_range=931,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=C9F09_28505;partial=true;product=type VI secretion system baseplate subunit TssK;protein_id=TGC74006.1;transl_table=11 ##sequence-region PYKB01000835.1 1 929 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000835.1 Genbank region 1 929 . + . ID=PYKB01000835.1:1..929;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000835.1 Genbank gene 1 929 . - . ID=gene-C9F09_13190;Name=C9F09_13190;end_range=929,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13190;partial=true;start_range=.,1 PYKB01000835.1 Protein Homology CDS 1 929 . - 1 ID=cds-TGC91545.1;Parent=gene-C9F09_13190;Dbxref=NCBI_GP:TGC91545.1;Name=TGC91545.1;end_range=929,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=C9F09_13190;partial=true;product=formate dehydrogenase;protein_id=TGC91545.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001344.1 1 924 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001344.1 Genbank region 1 924 . + . ID=PYKB01001344.1:1..924;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001344.1 Genbank gene 1 924 . - . ID=gene-C9F09_23150;Name=fliI;end_range=924,.;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=C9F09_23150;partial=true;start_range=.,1 PYKB01001344.1 Protein Homology CDS 1 924 . - 0 ID=cds-TGC80663.1;Parent=gene-C9F09_23150;Dbxref=NCBI_GP:TGC80663.1;Name=TGC80663.1;Note=involved in type III protein export during flagellum assembly;end_range=924,.;gbkey=CDS;gene=fliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=C9F09_23150;partial=true;product=flagellum-specific ATP synthase FliI;protein_id=TGC80663.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000525.1 1 920 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000525.1 Genbank region 1 920 . + . ID=PYKB01000525.1:1..920;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000525.1 Genbank gene 191 920 . + . ID=gene-C9F09_07065;Name=C9F09_07065;end_range=920,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07065;partial=true PYKB01000525.1 Protein Homology CDS 191 920 . + 0 ID=cds-TGC97084.1;Parent=gene-C9F09_07065;Dbxref=NCBI_GP:TGC97084.1;Name=TGC97084.1;end_range=920,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=C9F09_07065;partial=true;product=alcohol dehydrogenase;protein_id=TGC97084.1;transl_table=11 ##sequence-region PYKB01001531.1 1 917 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001531.1 Genbank region 1 917 . + . ID=PYKB01001531.1:1..917;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001531.1 Genbank pseudogene 318 809 . + . ID=gene-C9F09_26645;Name=C9F09_26645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_26645;pseudo=true PYKB01001531.1 Protein Homology CDS 318 809 . + 0 ID=cds-C9F09_26645;Parent=gene-C9F09_26645;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455709.1;locus_tag=C9F09_26645;product=lipoprotein-releasing system transmembrane subunit LolC;pseudo=true;transl_table=11 ##sequence-region PYKB01000218.1 1 916 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000218.1 Genbank region 1 916 . + . ID=PYKB01000218.1:1..916;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000218.1 Genbank gene 1 386 . - . ID=gene-C9F09_02325;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=C9F09_02325;partial=true;start_range=.,1 PYKB01000218.1 Protein Homology CDS 1 386 . - 0 ID=cds-TGD03353.1;Parent=gene-C9F09_02325;Dbxref=NCBI_GP:TGD03353.1;Name=TGD03353.1;Note=a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity%3B converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH;gbkey=CDS;gene=astD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=C9F09_02325;partial=true;product=N-succinylglutamate 5-semialdehyde dehydrogenase;protein_id=TGD03353.1;start_range=.,1;transl_table=11 PYKB01000218.1 Genbank pseudogene 383 916 . - . ID=gene-C9F09_02330;Name=C9F09_02330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02330;pseudo=true PYKB01000218.1 Protein Homology CDS 383 916 . - 0 ID=cds-C9F09_02330;Parent=gene-C9F09_02330;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=C9F09_02330;product=arginine N-succinyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKB01000632.1 1 7369 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000632.1 Genbank region 1 7369 . + . ID=PYKB01000632.1:1..7369;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000632.1 Genbank gene 137 1042 . - . ID=gene-C9F09_09385;Name=C9F09_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09385 PYKB01000632.1 Protein Homology CDS 137 1042 . - 0 ID=cds-TGC94677.1;Parent=gene-C9F09_09385;Dbxref=NCBI_GP:TGC94677.1;Name=TGC94677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=C9F09_09385;product=LysR family transcriptional regulator;protein_id=TGC94677.1;transl_table=11 PYKB01000632.1 Genbank gene 1161 2090 . + . ID=gene-C9F09_09390;Name=C9F09_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09390 PYKB01000632.1 Protein Homology CDS 1161 2090 . + 0 ID=cds-TGC94678.1;Parent=gene-C9F09_09390;Dbxref=NCBI_GP:TGC94678.1;Name=TGC94678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455826.1;locus_tag=C9F09_09390;product=aromatic alcohol reductase;protein_id=TGC94678.1;transl_table=11 PYKB01000632.1 Genbank gene 2578 3759 . - . ID=gene-C9F09_09395;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=C9F09_09395 PYKB01000632.1 Protein Homology CDS 2578 3759 . - 0 ID=cds-TGC94679.1;Parent=gene-C9F09_09395;Dbxref=NCBI_GP:TGC94679.1;Name=TGC94679.1;gbkey=CDS;gene=metC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066156.1;locus_tag=C9F09_09395;product=cystathionine beta-lyase;protein_id=TGC94679.1;transl_table=11 PYKB01000632.1 Genbank gene 3786 4973 . - . ID=gene-C9F09_09400;Name=C9F09_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09400 PYKB01000632.1 Protein Homology CDS 3786 4973 . - 0 ID=cds-TGC94682.1;Parent=gene-C9F09_09400;Dbxref=NCBI_GP:TGC94682.1;Name=TGC94682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662488.1;locus_tag=C9F09_09400;product=transporter;protein_id=TGC94682.1;transl_table=11 PYKB01000632.1 Genbank gene 5145 5531 . - . ID=gene-C9F09_09405;Name=C9F09_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09405 PYKB01000632.1 Protein Homology CDS 5145 5531 . - 0 ID=cds-TGC94680.1;Parent=gene-C9F09_09405;Dbxref=NCBI_GP:TGC94680.1;Name=TGC94680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005593941.1;locus_tag=C9F09_09405;product=RidA family protein;protein_id=TGC94680.1;transl_table=11 PYKB01000632.1 Genbank gene 5849 6790 . - . ID=gene-C9F09_09410;Name=C9F09_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09410 PYKB01000632.1 Protein Homology CDS 5849 6790 . - 0 ID=cds-TGC94683.1;Parent=gene-C9F09_09410;Dbxref=NCBI_GP:TGC94683.1;Name=TGC94683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004137094.1;locus_tag=C9F09_09410;product=LysR family transcriptional regulator;protein_id=TGC94683.1;transl_table=11 PYKB01000632.1 Genbank gene 7042 7369 . + . ID=gene-C9F09_09415;Name=C9F09_09415;end_range=7369,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09415;partial=true PYKB01000632.1 Protein Homology CDS 7042 7369 . + 0 ID=cds-TGC94681.1;Parent=gene-C9F09_09415;Dbxref=NCBI_GP:TGC94681.1;Name=TGC94681.1;end_range=7369,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016810048.1;locus_tag=C9F09_09415;partial=true;product=LysR family transcriptional regulator;protein_id=TGC94681.1;transl_table=11 ##sequence-region PYKB01000676.1 1 912 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000676.1 Genbank region 1 912 . + . ID=PYKB01000676.1:1..912;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000676.1 Genbank gene 1 912 . + . ID=gene-C9F09_10110;Name=metH;end_range=912,.;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=C9F09_10110;partial=true;start_range=.,1 PYKB01000676.1 Protein Homology CDS 1 912 . + 1 ID=cds-TGC94013.1;Parent=gene-C9F09_10110;Dbxref=NCBI_GP:TGC94013.1;Name=TGC94013.1;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;end_range=912,.;gbkey=CDS;gene=metH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463053.3;locus_tag=C9F09_10110;partial=true;product=methionine synthase;protein_id=TGC94013.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001548.1 1 906 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001548.1 Genbank region 1 906 . + . ID=PYKB01001548.1:1..906;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001548.1 Genbank gene 1 459 . - . ID=gene-C9F09_27025;Name=C9F09_27025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27025;partial=true;start_range=.,1 PYKB01001548.1 Protein Homology CDS 1 459 . - 0 ID=cds-TGC76033.1;Parent=gene-C9F09_27025;Dbxref=NCBI_GP:TGC76033.1;Name=TGC76033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=C9F09_27025;partial=true;product=L-lactate dehydrogenase;protein_id=TGC76033.1;start_range=.,1;transl_table=11 PYKB01001548.1 Genbank gene 456 906 . - . ID=gene-C9F09_27030;Name=C9F09_27030;end_range=906,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27030;partial=true PYKB01001548.1 Protein Homology CDS 456 906 . - 1 ID=cds-TGC76034.1;Parent=gene-C9F09_27030;Dbxref=NCBI_GP:TGC76034.1;Name=TGC76034.1;Note=represses the lctPRD operon;end_range=906,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=C9F09_27030;partial=true;product=transcriptional regulator LldR;protein_id=TGC76034.1;transl_table=11 ##sequence-region PYKB01000042.1 1 906 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000042.1 Genbank region 1 906 . + . ID=PYKB01000042.1:1..906;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000042.1 Genbank pseudogene 108 260 . + . ID=gene-C9F09_00490;Name=cbiC;gbkey=Gene;gene=cbiC;gene_biotype=pseudogene;locus_tag=C9F09_00490;pseudo=true PYKB01000042.1 Protein Homology CDS 108 260 . + 0 ID=cds-C9F09_00490;Parent=gene-C9F09_00490;Note=catalyzes the interconversion of cobalt-precorrin-8X and cobyrinic acid in the anaerobic biosynthesis of cobalamin%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=cbiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=C9F09_00490;product=precorrin-8X methylmutase;pseudo=true;transl_table=11 PYKB01000042.1 Genbank gene 260 906 . + . ID=gene-C9F09_00495;Name=cbiD;end_range=906,.;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=C9F09_00495;partial=true PYKB01000042.1 Protein Homology CDS 260 906 . + 0 ID=cds-TGD06635.1;Parent=gene-C9F09_00495;Dbxref=NCBI_GP:TGD06635.1;Name=TGD06635.1;Note=Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A;end_range=906,.;gbkey=CDS;gene=cbiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=C9F09_00495;partial=true;product=cobalt-precorrin-5B (C(1))-methyltransferase;protein_id=TGD06635.1;transl_table=11 ##sequence-region PYKB01000775.1 1 905 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000775.1 Genbank region 1 905 . + . ID=PYKB01000775.1:1..905;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000775.1 Genbank gene 1 607 . - . ID=gene-C9F09_12005;Name=C9F09_12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12005;partial=true;start_range=.,1 PYKB01000775.1 Protein Homology CDS 1 607 . - 0 ID=cds-TGC92543.1;Parent=gene-C9F09_12005;Dbxref=NCBI_GP:TGC92543.1;Name=TGC92543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457336.1;locus_tag=C9F09_12005;partial=true;product=NADPH-dependent assimilatory sulfite reductase hemoprotein subunit;protein_id=TGC92543.1;start_range=.,1;transl_table=11 PYKB01000775.1 Genbank gene 607 905 . - . ID=gene-C9F09_12010;Name=cysJ;end_range=905,.;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=C9F09_12010;partial=true PYKB01000775.1 Protein Homology CDS 607 905 . - 2 ID=cds-TGC92544.1;Parent=gene-C9F09_12010;Dbxref=NCBI_GP:TGC92544.1;Name=TGC92544.1;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;end_range=905,.;gbkey=CDS;gene=cysJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457337.1;locus_tag=C9F09_12010;partial=true;product=sulfite reductase subunit alpha;protein_id=TGC92544.1;transl_table=11 ##sequence-region PYKB01000183.1 1 900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000183.1 Genbank region 1 900 . + . ID=PYKB01000183.1:1..900;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000183.1 Genbank gene 1 471 . + . ID=gene-C9F09_02040;Name=C9F09_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02040;partial=true;start_range=.,1 PYKB01000183.1 Protein Homology CDS 1 471 . + 0 ID=cds-TGD03828.1;Parent=gene-C9F09_02040;Dbxref=NCBI_GP:TGD03828.1;Name=TGD03828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456336.1;locus_tag=C9F09_02040;partial=true;product=PTS mannose transporter subunit IIAB;protein_id=TGD03828.1;start_range=.,1;transl_table=11 PYKB01000183.1 Genbank gene 524 900 . + . ID=gene-C9F09_02045;Name=C9F09_02045;end_range=900,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02045;partial=true PYKB01000183.1 Protein Homology CDS 524 900 . + 0 ID=cds-TGD03829.1;Parent=gene-C9F09_02045;Dbxref=NCBI_GP:TGD03829.1;Name=TGD03829.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site;end_range=900,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=C9F09_02045;partial=true;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=TGD03829.1;transl_table=11 ##sequence-region PYKB01000094.1 1 899 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000094.1 Genbank region 1 899 . + . ID=PYKB01000094.1:1..899;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000094.1 Genbank gene 1 257 . - . ID=gene-C9F09_01110;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=C9F09_01110;partial=true;start_range=.,1 PYKB01000094.1 Protein Homology CDS 1 257 . - 0 ID=cds-TGD05587.1;Parent=gene-C9F09_01110;Dbxref=NCBI_GP:TGD05587.1;Name=TGD05587.1;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;gbkey=CDS;gene=xseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457046.1;locus_tag=C9F09_01110;partial=true;product=exodeoxyribonuclease VII large subunit;protein_id=TGD05587.1;start_range=.,1;transl_table=11 PYKB01000094.1 Genbank gene 418 899 . + . ID=gene-C9F09_01115;Name=C9F09_01115;end_range=899,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01115;partial=true PYKB01000094.1 Protein Homology CDS 418 899 . + 0 ID=cds-TGD05586.1;Parent=gene-C9F09_01115;Dbxref=NCBI_GP:TGD05586.1;Name=TGD05586.1;end_range=899,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461446.1;locus_tag=C9F09_01115;partial=true;product=hypothetical protein;protein_id=TGD05586.1;transl_table=11 ##sequence-region PYKB01000233.1 1 899 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000233.1 Genbank region 1 899 . + . ID=PYKB01000233.1:1..899;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000233.1 Genbank gene 1 407 . - . ID=gene-C9F09_02545;Name=C9F09_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02545;partial=true;start_range=.,1 PYKB01000233.1 Protein Homology CDS 1 407 . - 0 ID=cds-TGD03023.1;Parent=gene-C9F09_02545;Dbxref=NCBI_GP:TGD03023.1;Name=TGD03023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=C9F09_02545;partial=true;product=ABC transporter permease;protein_id=TGD03023.1;start_range=.,1;transl_table=11 PYKB01000233.1 Genbank pseudogene 415 801 . - . ID=gene-C9F09_02550;Name=C9F09_02550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02550;pseudo=true PYKB01000233.1 Protein Homology CDS 415 801 . - 0 ID=cds-C9F09_02550;Parent=gene-C9F09_02550;Note=ABC transporter maintaining outer membrane lipid asymmetry%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457692.1;locus_tag=C9F09_02550;product=phospholipid ABC transporter ATP-binding protein MlaF;pseudo=true;transl_table=11 ##sequence-region PYKB01001236.1 1 894 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001236.1 Genbank region 1 894 . + . ID=PYKB01001236.1:1..894;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001236.1 Genbank pseudogene 216 863 . - . ID=gene-C9F09_21035;Name=C9F09_21035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21035;pseudo=true PYKB01001236.1 Protein Homology CDS 216 863 . - 0 ID=cds-C9F09_21035;Parent=gene-C9F09_21035;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830285.1;locus_tag=C9F09_21035;product=IS30 family transposase;pseudo=true;transl_table=11 ##sequence-region PYKB01001276.1 1 894 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001276.1 Genbank region 1 894 . + . ID=PYKB01001276.1:1..894;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001276.1 Genbank gene 1 340 . + . ID=gene-C9F09_21860;Name=C9F09_21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21860;partial=true;start_range=.,1 PYKB01001276.1 Protein Homology CDS 1 340 . + 1 ID=cds-TGC82028.1;Parent=gene-C9F09_21860;Dbxref=NCBI_GP:TGC82028.1;Name=TGC82028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456617.1;locus_tag=C9F09_21860;partial=true;product=NAD(P)-dependent oxidoreductase;protein_id=TGC82028.1;start_range=.,1;transl_table=11 PYKB01001276.1 Genbank pseudogene 386 844 . + . ID=gene-C9F09_21865;Name=C9F09_21865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21865;pseudo=true PYKB01001276.1 Protein Homology CDS 386 844 . + 0 ID=cds-C9F09_21865;Parent=gene-C9F09_21865;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456616.1;locus_tag=C9F09_21865;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKB01001345.1 1 890 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001345.1 Genbank region 1 890 . + . ID=PYKB01001345.1:1..890;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001345.1 Genbank pseudogene 1 829 . + . ID=gene-C9F09_23155;Name=C9F09_23155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23155;pseudo=true PYKB01001345.1 Protein Homology CDS 1 829 . + 1 ID=cds-C9F09_23155;Parent=gene-C9F09_23155;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=C9F09_23155;product=phosphomannomutase CpsG;pseudo=true;transl_table=11 ##sequence-region PYKB01000587.1 1 7334 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000587.1 Genbank region 1 7334 . + . ID=PYKB01000587.1:1..7334;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000587.1 Genbank pseudogene 70 279 . - . ID=gene-C9F09_08470;Name=C9F09_08470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08470;pseudo=true PYKB01000587.1 Protein Homology CDS 70 279 . - 0 ID=cds-C9F09_08470;Parent=gene-C9F09_08470;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455885.1;locus_tag=C9F09_08470;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000587.1 Genbank gene 496 1035 . + . ID=gene-C9F09_08475;Name=C9F09_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08475 PYKB01000587.1 Protein Homology CDS 496 1035 . + 0 ID=cds-TGC95645.1;Parent=gene-C9F09_08475;Dbxref=NCBI_GP:TGC95645.1;Name=TGC95645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455886.1;locus_tag=C9F09_08475;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=TGC95645.1;transl_table=11 PYKB01000587.1 Genbank gene 1032 2012 . - . ID=gene-C9F09_08480;Name=C9F09_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08480 PYKB01000587.1 Protein Homology CDS 1032 2012 . - 0 ID=cds-TGC95646.1;Parent=gene-C9F09_08480;Dbxref=NCBI_GP:TGC95646.1;Name=TGC95646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455887.1;locus_tag=C9F09_08480;product=hypothetical protein;protein_id=TGC95646.1;transl_table=11 PYKB01000587.1 Genbank gene 2119 3132 . + . ID=gene-C9F09_08485;Name=C9F09_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08485 PYKB01000587.1 Protein Homology CDS 2119 3132 . + 0 ID=cds-TGC95647.1;Parent=gene-C9F09_08485;Dbxref=NCBI_GP:TGC95647.1;Name=TGC95647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=C9F09_08485;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=TGC95647.1;transl_table=11 PYKB01000587.1 Genbank gene 3119 3715 . + . ID=gene-C9F09_08490;Name=C9F09_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08490 PYKB01000587.1 Protein Homology CDS 3119 3715 . + 0 ID=cds-TGC95648.1;Parent=gene-C9F09_08490;Dbxref=NCBI_GP:TGC95648.1;Name=TGC95648.1;Note=with TehA confers resistance to tellurite;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=C9F09_08490;product=tellurite resistance methyltransferase TehB;protein_id=TGC95648.1;transl_table=11 PYKB01000587.1 Genbank gene 3871 4539 . + . ID=gene-C9F09_08495;Name=C9F09_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08495 PYKB01000587.1 Protein Homology CDS 3871 4539 . + 0 ID=cds-TGC95649.1;Parent=gene-C9F09_08495;Dbxref=NCBI_GP:TGC95649.1;Name=TGC95649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=C9F09_08495;product=DUF3313 domain-containing protein;protein_id=TGC95649.1;transl_table=11 PYKB01000587.1 Genbank gene 4593 5771 . - . ID=gene-C9F09_08500;Name=C9F09_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08500 PYKB01000587.1 Protein Homology CDS 4593 5771 . - 0 ID=cds-TGC95650.1;Parent=gene-C9F09_08500;Dbxref=NCBI_GP:TGC95650.1;Name=TGC95650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=C9F09_08500;product=benzoate transporter;protein_id=TGC95650.1;transl_table=11 PYKB01000587.1 Genbank gene 5864 6400 . + . ID=gene-C9F09_08505;Name=C9F09_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08505 PYKB01000587.1 Protein Homology CDS 5864 6400 . + 0 ID=cds-TGC95651.1;Parent=gene-C9F09_08505;Dbxref=NCBI_GP:TGC95651.1;Name=TGC95651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455892.1;locus_tag=C9F09_08505;product=XRE family transcriptional regulator;protein_id=TGC95651.1;transl_table=11 PYKB01000587.1 Genbank pseudogene 6479 7291 . + . ID=gene-C9F09_08510;Name=C9F09_08510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08510;pseudo=true PYKB01000587.1 Protein Homology CDS 6479 7291 . + 0 ID=cds-C9F09_08510;Parent=gene-C9F09_08510;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455893.1;locus_tag=C9F09_08510;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000718.1 1 889 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000718.1 Genbank region 1 889 . + . ID=PYKB01000718.1:1..889;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000718.1 Genbank pseudogene 1 417 . + . ID=gene-C9F09_10990;Name=C9F09_10990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10990;pseudo=true PYKB01000718.1 Protein Homology CDS 1 417 . + 0 ID=cds-C9F09_10990;Parent=gene-C9F09_10990;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=C9F09_10990;product=protein TolR;pseudo=true;transl_table=11 PYKB01000718.1 Genbank gene 482 889 . + . ID=gene-C9F09_10995;Name=tolA;end_range=889,.;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=C9F09_10995;partial=true PYKB01000718.1 Protein Homology CDS 482 889 . + 0 ID=cds-TGC93463.1;Parent=gene-C9F09_10995;Dbxref=NCBI_GP:TGC93463.1;Name=TGC93463.1;end_range=889,.;gbkey=CDS;gene=tolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=C9F09_10995;partial=true;product=cell envelope integrity protein TolA;protein_id=TGC93463.1;transl_table=11 ##sequence-region PYKB01000929.1 1 886 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000929.1 Genbank region 1 886 . + . ID=PYKB01000929.1:1..886;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000929.1 Genbank gene 1 215 . - . ID=gene-C9F09_15330;Name=C9F09_15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15330;partial=true;start_range=.,1 PYKB01000929.1 Protein Homology CDS 1 215 . - 0 ID=cds-TGC89702.1;Parent=gene-C9F09_15330;Dbxref=NCBI_GP:TGC89702.1;Name=TGC89702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311152.1;locus_tag=C9F09_15330;partial=true;product=hypothetical protein;protein_id=TGC89702.1;start_range=.,1;transl_table=11 PYKB01000929.1 Genbank gene 488 886 . + . ID=gene-C9F09_15335;Name=C9F09_15335;end_range=886,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15335;partial=true PYKB01000929.1 Protein Homology CDS 488 886 . + 0 ID=cds-TGC89703.1;Parent=gene-C9F09_15335;Dbxref=NCBI_GP:TGC89703.1;Name=TGC89703.1;end_range=886,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456827.1;locus_tag=C9F09_15335;partial=true;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=TGC89703.1;transl_table=11 ##sequence-region PYKB01000392.1 1 882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000392.1 Genbank region 1 882 . + . ID=PYKB01000392.1:1..882;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000392.1 Genbank pseudogene 47 457 . - . ID=gene-C9F09_04395;Name=C9F09_04395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04395;pseudo=true PYKB01000392.1 Protein Homology CDS 47 457 . - 0 ID=cds-C9F09_04395;Parent=gene-C9F09_04395;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460395.1;locus_tag=C9F09_04395;product=endopeptidase;pseudo=true;transl_table=11 PYKB01000392.1 Genbank gene 759 882 . + . ID=gene-C9F09_04400;Name=C9F09_04400;end_range=882,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04400;partial=true PYKB01000392.1 Protein Homology CDS 759 882 . + 0 ID=cds-TGC99783.1;Parent=gene-C9F09_04400;Dbxref=NCBI_GP:TGC99783.1;Name=TGC99783.1;end_range=882,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456097.1;locus_tag=C9F09_04400;partial=true;product=glutaredoxin;protein_id=TGC99783.1;transl_table=11 ##sequence-region PYKB01001078.1 1 873 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001078.1 Genbank region 1 873 . + . ID=PYKB01001078.1:1..873;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001078.1 Genbank gene 1 327 . + . ID=gene-C9F09_17995;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=C9F09_17995;partial=true;start_range=.,1 PYKB01001078.1 Protein Homology CDS 1 327 . + 0 ID=cds-TGC86515.1;Parent=gene-C9F09_17995;Dbxref=NCBI_GP:TGC86515.1;Name=TGC86515.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455557.1;locus_tag=C9F09_17995;partial=true;product=cell division protein ZapC;protein_id=TGC86515.1;start_range=.,1;transl_table=11 PYKB01001078.1 Genbank gene 324 873 . - . ID=gene-C9F09_18000;Name=C9F09_18000;end_range=873,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18000;partial=true PYKB01001078.1 Protein Homology CDS 324 873 . - 1 ID=cds-TGC86516.1;Parent=gene-C9F09_18000;Dbxref=NCBI_GP:TGC86516.1;Name=TGC86516.1;end_range=873,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455558.1;locus_tag=C9F09_18000;partial=true;product=hypothetical protein;protein_id=TGC86516.1;transl_table=11 ##sequence-region PYKB01001077.1 1 868 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001077.1 Genbank region 1 868 . + . ID=PYKB01001077.1:1..868;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001077.1 Genbank gene 1 868 . + . ID=gene-C9F09_17990;Name=C9F09_17990;end_range=868,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17990;partial=true;start_range=.,1 PYKB01001077.1 Protein Homology CDS 1 868 . + 1 ID=cds-TGC86528.1;Parent=gene-C9F09_17990;Dbxref=NCBI_GP:TGC86528.1;Name=TGC86528.1;Note=exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA;end_range=868,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=C9F09_17990;partial=true;product=ATP-dependent RNA helicase DbpA;protein_id=TGC86528.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000192.1 1 860 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000192.1 Genbank region 1 860 . + . ID=PYKB01000192.1:1..860;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000192.1 Genbank gene 1 860 . + . ID=gene-C9F09_02145;Name=C9F09_02145;end_range=860,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02145;partial=true;start_range=.,1 PYKB01000192.1 Protein Homology CDS 1 860 . + 2 ID=cds-TGD03810.1;Parent=gene-C9F09_02145;Dbxref=NCBI_GP:TGD03810.1;Name=TGD03810.1;end_range=860,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=C9F09_02145;partial=true;product=DNA translocase FtsK;protein_id=TGD03810.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001382.1 1 859 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001382.1 Genbank region 1 859 . + . ID=PYKB01001382.1:1..859;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001382.1 Genbank pseudogene 18 473 . - . ID=gene-C9F09_23855;Name=C9F09_23855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23855;pseudo=true PYKB01001382.1 Protein Homology CDS 18 473 . - 0 ID=cds-C9F09_23855;Parent=gene-C9F09_23855;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=C9F09_23855;product=exonuclease subunit SbcC;pseudo=true;transl_table=11 PYKB01001382.1 Genbank pseudogene 470 826 . - . ID=gene-C9F09_23860;Name=C9F09_23860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23860;pseudo=true PYKB01001382.1 Protein Homology CDS 470 826 . - 0 ID=cds-C9F09_23860;Parent=gene-C9F09_23860;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454990.1;locus_tag=C9F09_23860;product=DNA exonuclease SbcCD subunit SbcD;pseudo=true;transl_table=11 ##sequence-region PYKB01000111.1 1 857 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000111.1 Genbank region 1 857 . + . ID=PYKB01000111.1:1..857;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000111.1 Genbank pseudogene 72 764 . + . ID=gene-C9F09_01230;Name=C9F09_01230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01230;pseudo=true PYKB01000111.1 Protein Homology CDS 72 764 . + 0 ID=cds-C9F09_01230;Parent=gene-C9F09_01230;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457611.1;locus_tag=C9F09_01230;product=vancomycin high temperature exclusion protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000104.1 1 855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000104.1 Genbank region 1 855 . + . ID=PYKB01000104.1:1..855;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000104.1 Genbank gene 1 731 . + . ID=gene-C9F09_01195;Name=C9F09_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01195;partial=true;start_range=.,1 PYKB01000104.1 Protein Homology CDS 1 731 . + 2 ID=cds-TGD05420.1;Parent=gene-C9F09_01195;Dbxref=NCBI_GP:TGD05420.1;Name=TGD05420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456911.1;locus_tag=C9F09_01195;partial=true;product=aspartate-semialdehyde dehydrogenase;protein_id=TGD05420.1;start_range=.,1;transl_table=11 PYKB01000104.1 Genbank gene 731 855 . + . ID=gene-C9F09_01200;Name=truA;end_range=855,.;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=C9F09_01200;partial=true PYKB01000104.1 Protein Homology CDS 731 855 . + 0 ID=cds-TGD05421.1;Parent=gene-C9F09_01200;Dbxref=NCBI_GP:TGD05421.1;Name=TGD05421.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;end_range=855,.;gbkey=CDS;gene=truA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456910.1;locus_tag=C9F09_01200;partial=true;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=TGD05421.1;transl_table=11 ##sequence-region PYKB01000603.1 1 854 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000603.1 Genbank region 1 854 . + . ID=PYKB01000603.1:1..854;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000603.1 Genbank gene 1 448 . + . ID=gene-C9F09_08845;Name=C9F09_08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08845;partial=true;start_range=.,1 PYKB01000603.1 Protein Homology CDS 1 448 . + 1 ID=cds-TGC95272.1;Parent=gene-C9F09_08845;Dbxref=NCBI_GP:TGC95272.1;Name=TGC95272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457524.1;locus_tag=C9F09_08845;partial=true;product=FAD-dependent oxidoreductase;protein_id=TGC95272.1;start_range=.,1;transl_table=11 PYKB01000603.1 Genbank gene 463 837 . + . ID=gene-C9F09_08850;Name=C9F09_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08850 PYKB01000603.1 Protein Homology CDS 463 837 . + 0 ID=cds-TGC95273.1;Parent=gene-C9F09_08850;Dbxref=NCBI_GP:TGC95273.1;Name=TGC95273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=C9F09_08850;product=cytoplasmic protein;protein_id=TGC95273.1;transl_table=11 ##sequence-region PYKB01000935.1 1 7323 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000935.1 Genbank region 1 7323 . + . ID=PYKB01000935.1:1..7323;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000935.1 Genbank pseudogene 79 693 . - . ID=gene-C9F09_15420;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=pseudogene;locus_tag=C9F09_15420;pseudo=true PYKB01000935.1 Protein Homology CDS 79 693 . - 0 ID=cds-C9F09_15420;Parent=gene-C9F09_15420;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455644.1;locus_tag=C9F09_15420;product=glucans biosynthesis protein MdoG;pseudo=true;transl_table=11 PYKB01000935.1 Genbank gene 965 2119 . + . ID=gene-C9F09_15425;Name=C9F09_15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15425 PYKB01000935.1 Protein Homology CDS 965 2119 . + 0 ID=cds-TGC89617.1;Parent=gene-C9F09_15425;Dbxref=NCBI_GP:TGC89617.1;Name=TGC89617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455643.1;locus_tag=C9F09_15425;product=glucans biosynthesis protein MdoC;protein_id=TGC89617.1;transl_table=11 PYKB01000935.1 Genbank gene 2136 3623 . - . ID=gene-C9F09_15430;Name=C9F09_15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15430 PYKB01000935.1 Protein Homology CDS 2136 3623 . - 0 ID=cds-TGC89618.1;Parent=gene-C9F09_15430;Dbxref=NCBI_GP:TGC89618.1;Name=TGC89618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455642.1;locus_tag=C9F09_15430;product=phospholipase D family protein;protein_id=TGC89618.1;transl_table=11 PYKB01000935.1 Genbank gene 3559 4098 . - . ID=gene-C9F09_15435;Name=C9F09_15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15435 PYKB01000935.1 Protein Homology CDS 3559 4098 . - 0 ID=cds-TGC89619.1;Parent=gene-C9F09_15435;Dbxref=NCBI_GP:TGC89619.1;Name=TGC89619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=C9F09_15435;product=O-acetyl-ADP-ribose deacetylase;protein_id=TGC89619.1;transl_table=11 PYKB01000935.1 Genbank gene 4185 4505 . - . ID=gene-C9F09_15440;Name=C9F09_15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15440 PYKB01000935.1 Protein Homology CDS 4185 4505 . - 0 ID=cds-TGC89620.1;Parent=gene-C9F09_15440;Dbxref=NCBI_GP:TGC89620.1;Name=TGC89620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455640.1;locus_tag=C9F09_15440;product=type 1 fimbrial protein;protein_id=TGC89620.1;transl_table=11 PYKB01000935.1 Genbank gene 4636 4962 . - . ID=gene-C9F09_15445;Name=C9F09_15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15445 PYKB01000935.1 Protein Homology CDS 4636 4962 . - 0 ID=cds-TGC89621.1;Parent=gene-C9F09_15445;Dbxref=NCBI_GP:TGC89621.1;Name=TGC89621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=C9F09_15445;product=curli assembly protein CsgC;protein_id=TGC89621.1;transl_table=11 PYKB01000935.1 Genbank gene 5024 5479 . - . ID=gene-C9F09_15450;Name=C9F09_15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15450 PYKB01000935.1 Protein Homology CDS 5024 5479 . - 0 ID=cds-TGC89622.1;Parent=gene-C9F09_15450;Dbxref=NCBI_GP:TGC89622.1;Name=TGC89622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455638.1;locus_tag=C9F09_15450;product=major curlin subunit CsgA;protein_id=TGC89622.1;transl_table=11 PYKB01000935.1 Genbank gene 5521 5976 . - . ID=gene-C9F09_15455;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=C9F09_15455 PYKB01000935.1 Protein Homology CDS 5521 5976 . - 0 ID=cds-TGC89623.1;Parent=gene-C9F09_15455;Dbxref=NCBI_GP:TGC89623.1;Name=TGC89623.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=C9F09_15455;product=minor curlin subunit;protein_id=TGC89623.1;transl_table=11 PYKB01000935.1 Genbank gene 5966 6145 . + . ID=gene-C9F09_15460;Name=C9F09_15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15460 PYKB01000935.1 Protein Homology CDS 5966 6145 . + 0 ID=cds-TGC89624.1;Parent=gene-C9F09_15460;Dbxref=NCBI_GP:TGC89624.1;Name=TGC89624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001703079.1;locus_tag=C9F09_15460;product=hypothetical protein;protein_id=TGC89624.1;transl_table=11 PYKB01000935.1 Genbank gene 6731 7323 . + . ID=gene-C9F09_15465;Name=C9F09_15465;end_range=7323,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15465;partial=true PYKB01000935.1 Protein Homology CDS 6731 7323 . + 0 ID=cds-TGC89625.1;Parent=gene-C9F09_15465;Dbxref=NCBI_GP:TGC89625.1;Name=TGC89625.1;end_range=7323,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455636.1;locus_tag=C9F09_15465;partial=true;product=transcriptional regulator CsgD;protein_id=TGC89625.1;transl_table=11 ##sequence-region PYKB01001322.1 1 853 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001322.1 Genbank region 1 853 . + . ID=PYKB01001322.1:1..853;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001322.1 Genbank pseudogene 75 437 . + . ID=gene-C9F09_22695;Name=C9F09_22695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22695;pseudo=true PYKB01001322.1 Protein Homology CDS 75 437 . + 0 ID=cds-C9F09_22695;Parent=gene-C9F09_22695;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=C9F09_22695;product=ATP-dependent protease;pseudo=true;transl_table=11 PYKB01001322.1 Genbank gene 462 800 . - . ID=gene-C9F09_22700;Name=C9F09_22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22700 PYKB01001322.1 Protein Homology CDS 462 800 . - 0 ID=cds-TGC81132.1;Parent=gene-C9F09_22700;Dbxref=NCBI_GP:TGC81132.1;Name=TGC81132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457896.1;locus_tag=C9F09_22700;product=DUF413 domain-containing protein;protein_id=TGC81132.1;transl_table=11 ##sequence-region PYKB01000674.1 1 851 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000674.1 Genbank region 1 851 . + . ID=PYKB01000674.1:1..851;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000674.1 Genbank gene 83 851 . - . ID=gene-C9F09_10100;Name=C9F09_10100;end_range=851,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10100;partial=true PYKB01000674.1 Protein Homology CDS 83 851 . - 1 ID=cds-TGC94026.1;Parent=gene-C9F09_10100;Dbxref=NCBI_GP:TGC94026.1;Name=TGC94026.1;Note=catalyzes the hydrolysis of terminal beta-D-glucosyl residues;end_range=851,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=C9F09_10100;partial=true;product=beta-glucosidase;protein_id=TGC94026.1;transl_table=11 ##sequence-region PYKB01000759.1 1 847 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000759.1 Genbank region 1 847 . + . ID=PYKB01000759.1:1..847;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000759.1 Genbank gene 1 473 . + . ID=gene-C9F09_11720;Name=C9F09_11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11720;partial=true;start_range=.,1 PYKB01000759.1 Protein Homology CDS 1 473 . + 2 ID=cds-TGC92807.1;Parent=gene-C9F09_11720;Dbxref=NCBI_GP:TGC92807.1;Name=TGC92807.1;Note=aldehyde reductase%3B catalyzes the conversion of acetaldehyde to ethanol;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=C9F09_11720;partial=true;product=ethanolamine utilization protein EutG;protein_id=TGC92807.1;start_range=.,1;transl_table=11 PYKB01000759.1 Genbank gene 593 847 . + . ID=gene-C9F09_11725;Name=C9F09_11725;end_range=847,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11725;partial=true PYKB01000759.1 Protein Homology CDS 593 847 . + 0 ID=cds-TGC92808.1;Parent=gene-C9F09_11725;Dbxref=NCBI_GP:TGC92808.1;Name=TGC92808.1;Note=may be involved in the transport of ethanolamine;end_range=847,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311341.1;locus_tag=C9F09_11725;partial=true;product=ethanolamine utilization protein EutH;protein_id=TGC92808.1;transl_table=11 ##sequence-region PYKB01001201.1 1 845 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001201.1 Genbank region 1 845 . + . ID=PYKB01001201.1:1..845;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001201.1 Genbank pseudogene 1 754 . + . ID=gene-C9F09_20460;Name=radA;gbkey=Gene;gene=radA;gene_biotype=pseudogene;locus_tag=C9F09_20460;pseudo=true PYKB01001201.1 Protein Homology CDS 1 754 . + 1 ID=cds-C9F09_20460;Parent=gene-C9F09_20460;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=radA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458987.1;locus_tag=C9F09_20460;product=DNA repair protein RadA;pseudo=true;transl_table=11 ##sequence-region PYKB01000230.1 1 833 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000230.1 Genbank region 1 833 . + . ID=PYKB01000230.1:1..833;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000230.1 Genbank gene 1 468 . - . ID=gene-C9F09_02470;Name=C9F09_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02470;partial=true;start_range=.,1 PYKB01000230.1 Protein Homology CDS 1 468 . - 0 ID=cds-TGD03072.1;Parent=gene-C9F09_02470;Dbxref=NCBI_GP:TGD03072.1;Name=TGD03072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458132.1;locus_tag=C9F09_02470;partial=true;product=transporter;protein_id=TGD03072.1;start_range=.,1;transl_table=11 PYKB01000230.1 Genbank gene 657 833 . - . ID=gene-C9F09_02475;Name=ibpB;end_range=833,.;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=C9F09_02475;partial=true PYKB01000230.1 Protein Homology CDS 657 833 . - 0 ID=cds-TGD03073.1;Parent=gene-C9F09_02475;Dbxref=NCBI_GP:TGD03073.1;Name=TGD03073.1;end_range=833,.;gbkey=CDS;gene=ibpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=C9F09_02475;partial=true;product=heat shock chaperone IbpB;protein_id=TGD03073.1;transl_table=11 ##sequence-region PYKB01001391.1 1 833 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001391.1 Genbank region 1 833 . + . ID=PYKB01001391.1:1..833;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001391.1 Genbank gene 145 807 . - . ID=gene-C9F09_23940;Name=C9F09_23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23940 PYKB01001391.1 Protein Homology CDS 145 807 . - 0 ID=cds-TGC79620.1;Parent=gene-C9F09_23940;Dbxref=NCBI_GP:TGC79620.1;Name=TGC79620.1;Note=Involved in anaerobic NO protection and iron metabolism;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458835.1;locus_tag=C9F09_23940;product=iron-sulfur cluster repair protein YtfE;protein_id=TGC79620.1;transl_table=11 ##sequence-region PYKB01001179.1 1 832 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001179.1 Genbank region 1 832 . + . ID=PYKB01001179.1:1..832;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001179.1 Genbank gene 1 609 . + . ID=gene-C9F09_19990;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;gene_synonym=nhaP2,ycgO;locus_tag=C9F09_19990;partial=true;start_range=.,1 PYKB01001179.1 Protein Homology CDS 1 609 . + 0 ID=cds-TGC84088.1;Parent=gene-C9F09_19990;Dbxref=NCBI_GP:TGC84088.1;Name=TGC84088.1;Note=the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli;gbkey=CDS;gene=cvrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456308.1;locus_tag=C9F09_19990;partial=true;product=K+/H+ antiporter;protein_id=TGC84088.1;start_range=.,1;transl_table=11 PYKB01001179.1 Genbank gene 671 832 . - . ID=gene-C9F09_19995;Name=C9F09_19995;end_range=832,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19995;partial=true PYKB01001179.1 Protein Homology CDS 671 832 . - 0 ID=cds-TGC84089.1;Parent=gene-C9F09_19995;Dbxref=NCBI_GP:TGC84089.1;Name=TGC84089.1;end_range=832,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=C9F09_19995;partial=true;product=alanine racemase;protein_id=TGC84089.1;transl_table=11 ##sequence-region PYKB01000210.1 1 831 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000210.1 Genbank region 1 831 . + . ID=PYKB01000210.1:1..831;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000210.1 Genbank gene 39 831 . - . ID=gene-C9F09_02280;Name=C9F09_02280;end_range=831,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02280;partial=true PYKB01000210.1 Protein Homology CDS 39 831 . - 1 ID=cds-TGD03546.1;Parent=gene-C9F09_02280;Dbxref=NCBI_GP:TGD03546.1;Name=TGD03546.1;end_range=831,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=C9F09_02280;partial=true;product=CTP synthase;protein_id=TGD03546.1;transl_table=11 ##sequence-region PYKB01001090.1 1 830 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001090.1 Genbank region 1 830 . + . ID=PYKB01001090.1:1..830;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001090.1 Genbank gene 57 620 . + . ID=gene-C9F09_18240;Name=C9F09_18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18240 PYKB01001090.1 Protein Homology CDS 57 620 . + 0 ID=cds-TGC86245.1;Parent=gene-C9F09_18240;Dbxref=NCBI_GP:TGC86245.1;Name=TGC86245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=C9F09_18240;product=prepilin peptidase-dependent protein;protein_id=TGC86245.1;transl_table=11 PYKB01001090.1 Genbank gene 617 830 . + . ID=gene-C9F09_18245;Name=C9F09_18245;end_range=830,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18245;partial=true PYKB01001090.1 Protein Homology CDS 617 830 . + 0 ID=cds-TGC86244.1;Parent=gene-C9F09_18245;Dbxref=NCBI_GP:TGC86244.1;Name=TGC86244.1;end_range=830,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457391.1;locus_tag=C9F09_18245;partial=true;product=hypothetical protein;protein_id=TGC86244.1;transl_table=11 ##sequence-region PYKB01001655.1 1 828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001655.1 Genbank region 1 828 . + . ID=PYKB01001655.1:1..828;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001655.1 Genbank pseudogene 64 633 . + . ID=gene-C9F09_28870;Name=C9F09_28870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28870;pseudo=true PYKB01001655.1 Protein Homology CDS 64 633 . + 0 ID=cds-C9F09_28870;Parent=gene-C9F09_28870;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001427299.1;locus_tag=C9F09_28870;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001655.1 Genbank gene 590 828 . + . ID=gene-C9F09_28875;Name=C9F09_28875;end_range=828,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28875;partial=true PYKB01001655.1 Protein Homology CDS 590 828 . + 0 ID=cds-TGC73440.1;Parent=gene-C9F09_28875;Dbxref=NCBI_GP:TGC73440.1;Name=TGC73440.1;end_range=828,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392887.1;locus_tag=C9F09_28875;partial=true;product=HNH endonuclease;protein_id=TGC73440.1;transl_table=11 ##sequence-region PYKB01000664.1 1 7316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000664.1 Genbank region 1 7316 . + . ID=PYKB01000664.1:1..7316;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000664.1 Genbank pseudogene 46 252 . - . ID=gene-C9F09_09970;Name=C9F09_09970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_09970;pseudo=true PYKB01000664.1 Protein Homology CDS 46 252 . - 0 ID=cds-C9F09_09970;Parent=gene-C9F09_09970;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457942.1;locus_tag=C9F09_09970;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 PYKB01000664.1 Genbank gene 413 2146 . - . ID=gene-C9F09_09975;Name=C9F09_09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09975 PYKB01000664.1 Protein Homology CDS 413 2146 . - 0 ID=cds-TGC94141.1;Parent=gene-C9F09_09975;Dbxref=NCBI_GP:TGC94141.1;Name=TGC94141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457941.1;locus_tag=C9F09_09975;product=hypothetical protein;protein_id=TGC94141.1;transl_table=11 PYKB01000664.1 Genbank pseudogene 2357 5008 . - . ID=gene-C9F09_09980;Name=C9F09_09980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_09980;pseudo=true PYKB01000664.1 Protein Homology CDS 2357 5008 . - 0 ID=cds-C9F09_09980;Parent=gene-C9F09_09980;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462999.1;locus_tag=C9F09_09980;product=phosphoenolpyruvate carboxylase;pseudo=true;transl_table=11 PYKB01000664.1 Genbank pseudogene 5193 5318 . - . ID=gene-C9F09_09985;Name=C9F09_09985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_09985;pseudo=true PYKB01000664.1 Protein Homology CDS 5193 5318 . - 0 ID=cds-C9F09_09985;Parent=gene-C9F09_09985;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800205.1;locus_tag=C9F09_09985;product=acetylornithine deacetylase;pseudo=true;transl_table=11 PYKB01000664.1 Genbank gene 5377 6528 . - . ID=gene-C9F09_09990;Name=C9F09_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09990 PYKB01000664.1 Protein Homology CDS 5377 6528 . - 0 ID=cds-TGC94142.1;Parent=gene-C9F09_09990;Dbxref=NCBI_GP:TGC94142.1;Name=TGC94142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122768.1;locus_tag=C9F09_09990;product=acetylornithine deacetylase;protein_id=TGC94142.1;transl_table=11 PYKB01000664.1 Genbank pseudogene 6617 7234 . + . ID=gene-C9F09_09995;Name=argC;gbkey=Gene;gene=argC;gene_biotype=pseudogene;locus_tag=C9F09_09995;pseudo=true PYKB01000664.1 Protein Homology CDS 6617 7234 . + 0 ID=cds-C9F09_09995;Parent=gene-C9F09_09995;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=argC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=C9F09_09995;product=N-acetyl-gamma-glutamyl-phosphate reductase;pseudo=true;transl_table=11 ##sequence-region PYKB01000142.1 1 827 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000142.1 Genbank region 1 827 . + . ID=PYKB01000142.1:1..827;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000142.1 Genbank pseudogene 75 827 . + . ID=gene-C9F09_01625;Name=C9F09_01625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01625;pseudo=true PYKB01000142.1 Protein Homology CDS 75 827 . + 0 ID=cds-C9F09_01625;Parent=gene-C9F09_01625;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455854.1;locus_tag=C9F09_01625;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;pseudo=true;transl_table=11 ##sequence-region PYKB01001376.1 1 825 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001376.1 Genbank region 1 825 . + . ID=PYKB01001376.1:1..825;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001376.1 Genbank pseudogene 1 128 . + . ID=gene-C9F09_23710;Name=C9F09_23710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23710;pseudo=true PYKB01001376.1 Protein Homology CDS 1 128 . + 2 ID=cds-C9F09_23710;Parent=gene-C9F09_23710;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=C9F09_23710;product=thymidylate synthase;pseudo=true;transl_table=11 PYKB01001376.1 Genbank pseudogene 121 304 . - . ID=gene-C9F09_23715;Name=C9F09_23715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23715;pseudo=true PYKB01001376.1 Protein Homology CDS 121 304 . - 0 ID=cds-C9F09_23715;Parent=gene-C9F09_23715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000896964.1;locus_tag=C9F09_23715;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001376.1 Genbank gene 314 784 . + . ID=gene-C9F09_23720;Name=C9F09_23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23720 PYKB01001376.1 Protein Homology CDS 314 784 . + 0 ID=cds-TGC80001.1;Parent=gene-C9F09_23720;Dbxref=NCBI_GP:TGC80001.1;Name=TGC80001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134942.1;locus_tag=C9F09_23720;product=prepilin-type cleavage/methylation domain-containing protein;protein_id=TGC80001.1;transl_table=11 ##sequence-region PYKB01001026.1 1 821 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001026.1 Genbank region 1 821 . + . ID=PYKB01001026.1:1..821;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001026.1 Genbank gene 1 306 . + . ID=gene-C9F09_17145;Name=C9F09_17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17145;partial=true;start_range=.,1 PYKB01001026.1 Protein Homology CDS 1 306 . + 0 ID=cds-TGC87690.1;Parent=gene-C9F09_17145;Dbxref=NCBI_GP:TGC87690.1;Name=TGC87690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458588.1;locus_tag=C9F09_17145;partial=true;product=hypothetical protein;protein_id=TGC87690.1;start_range=.,1;transl_table=11 PYKB01001026.1 Genbank gene 426 821 . + . ID=gene-C9F09_17150;Name=C9F09_17150;end_range=821,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17150;partial=true PYKB01001026.1 Protein Homology CDS 426 821 . + 0 ID=cds-TGC87691.1;Parent=gene-C9F09_17150;Dbxref=NCBI_GP:TGC87691.1;Name=TGC87691.1;end_range=821,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458587.1;locus_tag=C9F09_17150;partial=true;product=VOC family protein;protein_id=TGC87691.1;transl_table=11 ##sequence-region PYKB01001389.1 1 820 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001389.1 Genbank region 1 820 . + . ID=PYKB01001389.1:1..820;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001389.1 Genbank gene 1 574 . + . ID=gene-C9F09_23920;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=C9F09_23920;partial=true;start_range=.,1 PYKB01001389.1 Protein Homology CDS 1 574 . + 1 ID=cds-TGC79696.1;Parent=gene-C9F09_23920;Dbxref=NCBI_GP:TGC79696.1;Name=TGC79696.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455801.1;locus_tag=C9F09_23920;partial=true;product=peptide ABC transporter ATP-binding protein SapD;protein_id=TGC79696.1;start_range=.,1;transl_table=11 PYKB01001389.1 Genbank gene 576 820 . + . ID=gene-C9F09_23925;Name=sapF;end_range=820,.;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=C9F09_23925;partial=true PYKB01001389.1 Protein Homology CDS 576 820 . + 0 ID=cds-TGC79697.1;Parent=gene-C9F09_23925;Dbxref=NCBI_GP:TGC79697.1;Name=TGC79697.1;end_range=820,.;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455800.1;locus_tag=C9F09_23925;partial=true;product=peptide ABC transporter ATP-binding protein SapF;protein_id=TGC79697.1;transl_table=11 ##sequence-region PYKB01000743.1 1 819 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000743.1 Genbank region 1 819 . + . ID=PYKB01000743.1:1..819;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000743.1 Genbank gene 1 233 . - . ID=gene-C9F09_11455;Name=C9F09_11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11455;partial=true;start_range=.,1 PYKB01000743.1 Protein Homology CDS 1 233 . - 0 ID=cds-TGC93006.1;Parent=gene-C9F09_11455;Dbxref=NCBI_GP:TGC93006.1;Name=TGC93006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458881.1;locus_tag=C9F09_11455;partial=true;product=C4-dicarboxylate ABC transporter;protein_id=TGC93006.1;start_range=.,1;transl_table=11 PYKB01000743.1 Genbank gene 289 819 . - . ID=gene-C9F09_11460;Name=C9F09_11460;end_range=819,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11460;partial=true PYKB01000743.1 Protein Homology CDS 289 819 . - 0 ID=cds-TGC93005.1;Parent=gene-C9F09_11460;Dbxref=NCBI_GP:TGC93005.1;Name=TGC93005.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;end_range=819,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=C9F09_11460;partial=true;product=ornithine carbamoyltransferase subunit F;protein_id=TGC93005.1;transl_table=11 ##sequence-region PYKB01001198.1 1 815 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001198.1 Genbank region 1 815 . + . ID=PYKB01001198.1:1..815;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001198.1 Genbank gene 1 205 . - . ID=gene-C9F09_20420;Name=C9F09_20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20420;partial=true;start_range=.,1 PYKB01001198.1 Protein Homology CDS 1 205 . - 0 ID=cds-TGC83576.1;Parent=gene-C9F09_20420;Dbxref=NCBI_GP:TGC83576.1;Name=TGC83576.1;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456621.1;locus_tag=C9F09_20420;partial=true;product=histidinol-phosphate transaminase;protein_id=TGC83576.1;start_range=.,1;transl_table=11 PYKB01001198.1 Genbank gene 202 815 . - . ID=gene-C9F09_20425;Name=C9F09_20425;end_range=815,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20425;partial=true PYKB01001198.1 Protein Homology CDS 202 815 . - 2 ID=cds-TGC83577.1;Parent=gene-C9F09_20425;Dbxref=NCBI_GP:TGC83577.1;Name=TGC83577.1;end_range=815,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=C9F09_20425;partial=true;product=histidinol dehydrogenase;protein_id=TGC83577.1;transl_table=11 ##sequence-region PYKB01001615.1 1 815 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001615.1 Genbank region 1 815 . + . ID=PYKB01001615.1:1..815;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001615.1 Genbank pseudogene 13 815 . - . ID=gene-C9F09_28280;Name=C9F09_28280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28280;pseudo=true PYKB01001615.1 Protein Homology CDS 13 815 . - 2 ID=cds-C9F09_28280;Parent=gene-C9F09_28280;Note=cleaves DNA 25 basepairs downstream from the recognition site%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=C9F09_28280;product=type III restriction endonuclease subunit R;pseudo=true;transl_table=11 ##sequence-region PYKB01001602.1 1 813 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001602.1 Genbank region 1 813 . + . ID=PYKB01001602.1:1..813;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001602.1 Genbank gene 1 271 . + . ID=gene-C9F09_28115;Name=C9F09_28115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28115;partial=true;start_range=.,1 PYKB01001602.1 Protein Homology CDS 1 271 . + 1 ID=cds-TGC74799.1;Parent=gene-C9F09_28115;Dbxref=NCBI_GP:TGC74799.1;Name=TGC74799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=C9F09_28115;partial=true;product=sulfate ABC transporter substrate-binding protein;protein_id=TGC74799.1;start_range=.,1;transl_table=11 PYKB01001602.1 Genbank gene 271 813 . + . ID=gene-C9F09_28120;Name=C9F09_28120;end_range=813,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28120;partial=true PYKB01001602.1 Protein Homology CDS 271 813 . + 0 ID=cds-TGC74800.1;Parent=gene-C9F09_28120;Dbxref=NCBI_GP:TGC74800.1;Name=TGC74800.1;end_range=813,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=C9F09_28120;partial=true;product=molybdate ABC transporter permease subunit;protein_id=TGC74800.1;transl_table=11 ##sequence-region PYKB01000073.1 1 807 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000073.1 Genbank region 1 807 . + . ID=PYKB01000073.1:1..807;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000073.1 Genbank gene 1 204 . + . ID=gene-C9F09_00865;Name=C9F09_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00865;partial=true;start_range=.,1 PYKB01000073.1 Protein Homology CDS 1 204 . + 0 ID=cds-TGD06022.1;Parent=gene-C9F09_00865;Dbxref=NCBI_GP:TGD06022.1;Name=TGD06022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127736.1;locus_tag=C9F09_00865;partial=true;product=amino acid ABC transporter permease;protein_id=TGD06022.1;start_range=.,1;transl_table=11 PYKB01000073.1 Genbank gene 201 807 . + . ID=gene-C9F09_00870;Name=C9F09_00870;end_range=807,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00870;partial=true PYKB01000073.1 Protein Homology CDS 201 807 . + 0 ID=cds-TGD06023.1;Parent=gene-C9F09_00870;Dbxref=NCBI_GP:TGD06023.1;Name=TGD06023.1;end_range=807,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456514.1;locus_tag=C9F09_00870;partial=true;product=L-cystine ABC transporter ATP-binding protein YecC;protein_id=TGD06023.1;transl_table=11 ##sequence-region PYKB01000641.1 1 807 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000641.1 Genbank region 1 807 . + . ID=PYKB01000641.1:1..807;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000641.1 Genbank gene 1 508 . - . ID=gene-C9F09_09630;Name=C9F09_09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09630;partial=true;start_range=.,1 PYKB01000641.1 Protein Homology CDS 1 508 . - 0 ID=cds-TGC94533.1;Parent=gene-C9F09_09630;Dbxref=NCBI_GP:TGC94533.1;Name=TGC94533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455169.1;locus_tag=C9F09_09630;partial=true;product=hypothetical protein;protein_id=TGC94533.1;start_range=.,1;transl_table=11 PYKB01000641.1 Genbank gene 619 807 . + . ID=gene-C9F09_09635;Name=C9F09_09635;end_range=807,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09635;partial=true PYKB01000641.1 Protein Homology CDS 619 807 . + 0 ID=cds-TGC94534.1;Parent=gene-C9F09_09635;Dbxref=NCBI_GP:TGC94534.1;Name=TGC94534.1;Note=with FepBCG is involved in the transport of ferric enterobactin;end_range=807,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455168.1;locus_tag=C9F09_09635;partial=true;product=iron-enterobactin transporter;protein_id=TGC94534.1;transl_table=11 ##sequence-region PYKB01000839.1 1 7314 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000839.1 Genbank region 1 7314 . + . ID=PYKB01000839.1:1..7314;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000839.1 Genbank gene 181 1104 . + . ID=gene-C9F09_13270;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=C9F09_13270 PYKB01000839.1 Protein Homology CDS 181 1104 . + 0 ID=cds-TGC91465.1;Parent=gene-C9F09_13270;Dbxref=NCBI_GP:TGC91465.1;Name=TGC91465.1;Note=formate hydrogenlyase subunit 4%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide;gbkey=CDS;gene=hycD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457244.1;locus_tag=C9F09_13270;product=hydrogenase 3 membrane subunit;protein_id=TGC91465.1;transl_table=11 PYKB01000839.1 Genbank gene 1122 2831 . + . ID=gene-C9F09_13275;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=C9F09_13275 PYKB01000839.1 Protein Homology CDS 1122 2831 . + 0 ID=cds-TGC91466.1;Parent=gene-C9F09_13275;Dbxref=NCBI_GP:TGC91466.1;Name=TGC91466.1;Note=formate hydrogenlyase subunit 5%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=C9F09_13275;product=hydrogenase 3 large subunit;protein_id=TGC91466.1;transl_table=11 PYKB01000839.1 Genbank gene 2841 3383 . + . ID=gene-C9F09_13280;Name=C9F09_13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13280 PYKB01000839.1 Protein Homology CDS 2841 3383 . + 0 ID=cds-TGC91467.1;Parent=gene-C9F09_13280;Dbxref=NCBI_GP:TGC91467.1;Name=TGC91467.1;Note=electron transfer protein for hydrogenase-3%3B the formate hydrogenlyase complex comprises of a formate dehydrogenase%2C unidentified electron carriers and hydrogenase-3%3B in this non-energy conserving pathway%2C molecular hydrogen and carbodioxide are released from formate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457242.1;locus_tag=C9F09_13280;product=4Fe-4S dicluster domain-containing protein;protein_id=TGC91467.1;transl_table=11 PYKB01000839.1 Genbank gene 3383 4150 . + . ID=gene-C9F09_13285;Name=C9F09_13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13285 PYKB01000839.1 Protein Homology CDS 3383 4150 . + 0 ID=cds-TGC91468.1;Parent=gene-C9F09_13285;Dbxref=NCBI_GP:TGC91468.1;Name=TGC91468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=C9F09_13285;product=formate hydrogenlyase;protein_id=TGC91468.1;transl_table=11 PYKB01000839.1 Genbank gene 4147 4557 . + . ID=gene-C9F09_13290;Name=C9F09_13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13290 PYKB01000839.1 Protein Homology CDS 4147 4557 . + 0 ID=cds-TGC91469.1;Parent=gene-C9F09_13290;Dbxref=NCBI_GP:TGC91469.1;Name=TGC91469.1;Note=required for the maturation of the formate hydrogenlyase complex;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=C9F09_13290;product=formate hydrogenlyase maturation protein HycH;protein_id=TGC91469.1;transl_table=11 PYKB01000839.1 Genbank pseudogene 4550 5020 . + . ID=gene-C9F09_13295;Name=C9F09_13295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13295;pseudo=true PYKB01000839.1 Protein Homology CDS 4550 5020 . + 0 ID=cds-C9F09_13295;Parent=gene-C9F09_13295;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=C9F09_13295;product=hydrogenase maturation peptidase HycI;pseudo=true;transl_table=11 PYKB01000839.1 Genbank gene 5047 5856 . + . ID=gene-C9F09_13300;Name=C9F09_13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13300 PYKB01000839.1 Protein Homology CDS 5047 5856 . + 0 ID=cds-TGC91470.1;Parent=gene-C9F09_13300;Dbxref=NCBI_GP:TGC91470.1;Name=TGC91470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=C9F09_13300;product=hypothetical protein;protein_id=TGC91470.1;transl_table=11 PYKB01000839.1 Genbank gene 6057 6602 . + . ID=gene-C9F09_13305;Name=C9F09_13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13305 PYKB01000839.1 Protein Homology CDS 6057 6602 . + 0 ID=cds-TGC91471.1;Parent=gene-C9F09_13305;Dbxref=NCBI_GP:TGC91471.1;Name=TGC91471.1;Note=involved in electron transport from formate to hydrogen;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457237.1;locus_tag=C9F09_13305;product=formate dehydrogenase;protein_id=TGC91471.1;transl_table=11 PYKB01000839.1 Genbank gene 6748 7314 . + . ID=gene-C9F09_13310;Name=C9F09_13310;end_range=7314,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13310;partial=true PYKB01000839.1 Protein Homology CDS 6748 7314 . + 0 ID=cds-TGC91472.1;Parent=gene-C9F09_13310;Dbxref=NCBI_GP:TGC91472.1;Name=TGC91472.1;Note=carbamoyltransferase%3B involved in the formation of the cyanate group of hydrogenase%3B catalyzes the formation of carbamoyladenylate from carbamoylphosphate and then transfers the carbamoyl group to HypE;end_range=7314,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=C9F09_13310;partial=true;product=carbamoyltransferase HypF;protein_id=TGC91472.1;transl_table=11 ##sequence-region PYKB01001505.1 1 806 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001505.1 Genbank region 1 806 . + . ID=PYKB01001505.1:1..806;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001505.1 Genbank gene 1 479 . - . ID=gene-C9F09_26120;Name=C9F09_26120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26120;partial=true;start_range=.,1 PYKB01001505.1 Protein Homology CDS 1 479 . - 0 ID=cds-TGC77133.1;Parent=gene-C9F09_26120;Dbxref=NCBI_GP:TGC77133.1;Name=TGC77133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456515.1;locus_tag=C9F09_26120;partial=true;product=amino acid ABC transporter permease;protein_id=TGC77133.1;start_range=.,1;transl_table=11 PYKB01001505.1 Genbank gene 500 806 . - . ID=gene-C9F09_26125;Name=C9F09_26125;end_range=806,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26125;partial=true PYKB01001505.1 Protein Homology CDS 500 806 . - 1 ID=cds-TGC77134.1;Parent=gene-C9F09_26125;Dbxref=NCBI_GP:TGC77134.1;Name=TGC77134.1;Note=catalyzes the formation of pyruvate from D-cysteine;end_range=806,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=C9F09_26125;partial=true;product=D-cysteine desulfhydrase;protein_id=TGC77134.1;transl_table=11 ##sequence-region PYKB01001305.1 1 806 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001305.1 Genbank region 1 806 . + . ID=PYKB01001305.1:1..806;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001305.1 Genbank pseudogene 1 589 . - . ID=gene-C9F09_22325;Name=C9F09_22325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22325;pseudo=true PYKB01001305.1 Protein Homology CDS 1 589 . - 0 ID=cds-C9F09_22325;Parent=gene-C9F09_22325;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=C9F09_22325;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001305.1 Genbank gene 622 806 . + . ID=gene-C9F09_22330;Name=C9F09_22330;end_range=806,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22330;partial=true PYKB01001305.1 GeneMarkS+ CDS 622 806 . + 0 ID=cds-TGC81498.1;Parent=gene-C9F09_22330;Dbxref=NCBI_GP:TGC81498.1;Name=TGC81498.1;end_range=806,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_22330;partial=true;product=hypothetical protein;protein_id=TGC81498.1;transl_table=11 ##sequence-region PYKB01001680.1 1 805 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001680.1 Genbank region 1 805 . + . ID=PYKB01001680.1:1..805;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001680.1 Genbank gene 1 805 . + . ID=gene-C9F09_29210;Name=C9F09_29210;end_range=805,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29210;partial=true;start_range=.,1 PYKB01001680.1 Protein Homology CDS 1 805 . + 0 ID=cds-TGC72803.1;Parent=gene-C9F09_29210;Dbxref=NCBI_GP:TGC72803.1;Name=TGC72803.1;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;end_range=805,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457793.3;locus_tag=C9F09_29210;partial=true;product=ATP-dependent DNA helicase RecQ;protein_id=TGC72803.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000276.1 1 804 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000276.1 Genbank region 1 804 . + . ID=PYKB01000276.1:1..804;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000276.1 Genbank gene 1 389 . - . ID=gene-C9F09_03135;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=C9F09_03135;partial=true;start_range=.,1 PYKB01000276.1 Protein Homology CDS 1 389 . - 0 ID=cds-TGD01887.1;Parent=gene-C9F09_03135;Dbxref=NCBI_GP:TGD01887.1;Name=TGD01887.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=C9F09_03135;partial=true;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=TGD01887.1;start_range=.,1;transl_table=11 PYKB01000276.1 Genbank gene 418 804 . - . ID=gene-C9F09_03140;Name=osmY;end_range=804,.;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=C9F09_03140;partial=true PYKB01000276.1 Protein Homology CDS 418 804 . - 0 ID=cds-TGD01888.1;Parent=gene-C9F09_03140;Dbxref=NCBI_GP:TGD01888.1;Name=TGD01888.1;end_range=804,.;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455985.1;locus_tag=C9F09_03140;partial=true;product=osmoprotectant ABC transporter permease OsmY;protein_id=TGD01888.1;transl_table=11 ##sequence-region PYKB01000151.1 1 801 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000151.1 Genbank region 1 801 . + . ID=PYKB01000151.1:1..801;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000151.1 Genbank gene 1 145 . + . ID=gene-C9F09_01705;Name=C9F09_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01705;partial=true;start_range=.,1 PYKB01000151.1 Protein Homology CDS 1 145 . + 1 ID=cds-TGD04493.1;Parent=gene-C9F09_01705;Dbxref=NCBI_GP:TGD04493.1;Name=TGD04493.1;Note=participates in the regulation of osmotic pressure changes within the cel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457465.1;locus_tag=C9F09_01705;partial=true;product=mechanosensitive ion channel protein MscS;protein_id=TGD04493.1;start_range=.,1;transl_table=11 PYKB01000151.1 Genbank pseudogene 345 776 . + . ID=gene-C9F09_01710;Name=C9F09_01710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01710;pseudo=true PYKB01000151.1 Protein Homology CDS 345 776 . + 0 ID=cds-C9F09_01710;Parent=gene-C9F09_01710;Note=Involved in the export of arginine%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=C9F09_01710;product=arginine transporter;pseudo=true;transl_table=11 ##sequence-region PYKB01000345.1 1 797 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000345.1 Genbank region 1 797 . + . ID=PYKB01000345.1:1..797;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000345.1 Genbank pseudogene 1 356 . + . ID=gene-C9F09_03880;Name=C9F09_03880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03880;pseudo=true PYKB01000345.1 Protein Homology CDS 1 356 . + 2 ID=cds-C9F09_03880;Parent=gene-C9F09_03880;Note=universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=C9F09_03880;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;pseudo=true;transl_table=11 PYKB01000345.1 Genbank gene 263 601 . - . ID=gene-C9F09_03885;Name=C9F09_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03885 PYKB01000345.1 Protein Homology CDS 263 601 . - 0 ID=cds-TGD00615.1;Parent=gene-C9F09_03885;Dbxref=NCBI_GP:TGD00615.1;Name=TGD00615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669203.1;locus_tag=C9F09_03885;product=hypothetical protein;protein_id=TGD00615.1;transl_table=11 PYKB01000345.1 Genbank pseudogene 609 689 . - . ID=gene-C9F09_03890;Name=C9F09_03890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03890;pseudo=true PYKB01000345.1 Protein Homology CDS 609 689 . - 0 ID=cds-C9F09_03890;Parent=gene-C9F09_03890;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457598.1;locus_tag=C9F09_03890;product=acyl-phosphate--glycerol-3-phosphate O-acyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKB01000149.1 1 795 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000149.1 Genbank region 1 795 . + . ID=PYKB01000149.1:1..795;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000149.1 Genbank gene 1 221 . + . ID=gene-C9F09_01690;Name=C9F09_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01690;partial=true;start_range=.,1 PYKB01000149.1 Protein Homology CDS 1 221 . + 2 ID=cds-TGD04543.1;Parent=gene-C9F09_01690;Dbxref=NCBI_GP:TGD04543.1;Name=TGD04543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218833.1;locus_tag=C9F09_01690;partial=true;product=hypothetical protein;protein_id=TGD04543.1;start_range=.,1;transl_table=11 PYKB01000149.1 Genbank gene 199 795 . - . ID=gene-C9F09_01695;Name=C9F09_01695;end_range=795,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01695;partial=true PYKB01000149.1 Protein Homology CDS 199 795 . - 0 ID=cds-TGD04544.1;Parent=gene-C9F09_01695;Dbxref=NCBI_GP:TGD04544.1;Name=TGD04544.1;end_range=795,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=C9F09_01695;partial=true;product=hypothetical protein;protein_id=TGD04544.1;transl_table=11 ##sequence-region PYKB01000343.1 1 794 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000343.1 Genbank region 1 794 . + . ID=PYKB01000343.1:1..794;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000343.1 Genbank gene 1 554 . + . ID=gene-C9F09_03815;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=C9F09_03815;partial=true;start_range=.,1 PYKB01000343.1 Protein Homology CDS 1 554 . + 2 ID=cds-TGD00657.1;Parent=gene-C9F09_03815;Dbxref=NCBI_GP:TGD00657.1;Name=TGD00657.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003905541.1;locus_tag=C9F09_03815;partial=true;product=phosphoglucosamine mutase;protein_id=TGD00657.1;start_range=.,1;transl_table=11 PYKB01000343.1 Genbank gene 729 794 . + . ID=gene-C9F09_03820;Name=secG;end_range=794,.;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=C9F09_03820;partial=true PYKB01000343.1 Protein Homology CDS 729 794 . + 0 ID=cds-TGD00658.1;Parent=gene-C9F09_03820;Dbxref=NCBI_GP:TGD00658.1;Name=TGD00658.1;end_range=794,.;gbkey=CDS;gene=secG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228888.1;locus_tag=C9F09_03820;partial=true;product=preprotein translocase subunit SecG;protein_id=TGD00658.1;transl_table=11 ##sequence-region PYKB01001486.1 1 790 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001486.1 Genbank region 1 790 . + . ID=PYKB01001486.1:1..790;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001486.1 Genbank gene 1 790 . - . ID=gene-C9F09_25815;Name=recB;end_range=790,.;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=C9F09_25815;partial=true;start_range=.,1 PYKB01001486.1 Protein Homology CDS 1 790 . - 2 ID=cds-TGC77577.1;Parent=gene-C9F09_25815;Dbxref=NCBI_GP:TGC77577.1;Name=TGC77577.1;Note=helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;end_range=790,.;gbkey=CDS;gene=recB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457387.1;locus_tag=C9F09_25815;partial=true;product=exodeoxyribonuclease V subunit beta;protein_id=TGC77577.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000237.1 1 790 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000237.1 Genbank region 1 790 . + . ID=PYKB01000237.1:1..790;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000237.1 Genbank gene 54 790 . - . ID=gene-C9F09_02575;Name=C9F09_02575;end_range=790,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02575;partial=true PYKB01000237.1 Protein Homology CDS 54 790 . - 2 ID=cds-TGD02893.1;Parent=gene-C9F09_02575;Dbxref=NCBI_GP:TGD02893.1;Name=TGD02893.1;Note=catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate%3B also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity;end_range=790,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=C9F09_02575;partial=true;product=2-methylcitrate synthase;protein_id=TGD02893.1;transl_table=11 ##sequence-region PYKB01001220.1 1 7278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001220.1 Genbank region 1 7278 . + . ID=PYKB01001220.1:1..7278;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001220.1 Genbank pseudogene 1 7278 . - . ID=gene-C9F09_20715;Name=C9F09_20715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_20715;pseudo=true PYKB01001220.1 Protein Homology CDS 1 7278 . - 2 ID=cds-C9F09_20715;Parent=gene-C9F09_20715;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9F09_20715;product=Ig domain protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000881.1 1 790 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000881.1 Genbank region 1 790 . + . ID=PYKB01000881.1:1..790;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000881.1 Genbank gene 1 494 . + . ID=gene-C9F09_14365;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=C9F09_14365;partial=true;start_range=.,1 PYKB01000881.1 Protein Homology CDS 1 494 . + 2 ID=cds-TGC90585.1;Parent=gene-C9F09_14365;Dbxref=NCBI_GP:TGC90585.1;Name=TGC90585.1;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=C9F09_14365;partial=true;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=TGC90585.1;start_range=.,1;transl_table=11 PYKB01000881.1 Genbank gene 517 790 . + . ID=gene-C9F09_14370;Name=C9F09_14370;end_range=790,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14370;partial=true PYKB01000881.1 Protein Homology CDS 517 790 . + 0 ID=cds-TGC90586.1;Parent=gene-C9F09_14370;Dbxref=NCBI_GP:TGC90586.1;Name=TGC90586.1;end_range=790,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=C9F09_14370;partial=true;product=preprotein translocase subunit YajC;protein_id=TGC90586.1;transl_table=11 ##sequence-region PYKB01001492.1 1 784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001492.1 Genbank region 1 784 . + . ID=PYKB01001492.1:1..784;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001492.1 Genbank gene 1 509 . - . ID=gene-C9F09_25915;Name=C9F09_25915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25915;partial=true;start_range=.,1 PYKB01001492.1 Protein Homology CDS 1 509 . - 0 ID=cds-TGC77428.1;Parent=gene-C9F09_25915;Dbxref=NCBI_GP:TGC77428.1;Name=TGC77428.1;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456099.1;locus_tag=C9F09_25915;partial=true;product=superoxide dismutase [Fe];protein_id=TGC77428.1;start_range=.,1;transl_table=11 PYKB01001492.1 Genbank gene 636 784 . - . ID=gene-C9F09_25920;Name=C9F09_25920;end_range=784,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25920;partial=true PYKB01001492.1 Protein Homology CDS 636 784 . - 2 ID=cds-TGC77429.1;Parent=gene-C9F09_25920;Dbxref=NCBI_GP:TGC77429.1;Name=TGC77429.1;end_range=784,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456098.1;locus_tag=C9F09_25920;partial=true;product=hypothetical protein;protein_id=TGC77429.1;transl_table=11 ##sequence-region PYKB01000689.1 1 777 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000689.1 Genbank region 1 777 . + . ID=PYKB01000689.1:1..777;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000689.1 Genbank pseudogene 66 350 . + . ID=gene-C9F09_10455;Name=C9F09_10455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10455;pseudo=true PYKB01000689.1 Protein Homology CDS 66 350 . + 0 ID=cds-C9F09_10455;Parent=gene-C9F09_10455;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310519.1;locus_tag=C9F09_10455;product=PrkA family serine protein kinase;pseudo=true;transl_table=11 PYKB01000689.1 Genbank gene 473 777 . + . ID=gene-C9F09_10460;Name=C9F09_10460;end_range=777,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10460;partial=true PYKB01000689.1 Protein Homology CDS 473 777 . + 0 ID=cds-TGC93868.1;Parent=gene-C9F09_10460;Dbxref=NCBI_GP:TGC93868.1;Name=TGC93868.1;end_range=777,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=C9F09_10460;partial=true;product=DUF444 domain-containing protein;protein_id=TGC93868.1;transl_table=11 ##sequence-region PYKB01000224.1 1 773 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000224.1 Genbank region 1 773 . + . ID=PYKB01000224.1:1..773;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000224.1 Genbank pseudogene 56 244 . + . ID=gene-C9F09_02430;Name=C9F09_02430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02430;pseudo=true PYKB01000224.1 Protein Homology CDS 56 244 . + 0 ID=cds-C9F09_02430;Parent=gene-C9F09_02430;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001565771.1;locus_tag=C9F09_02430;product=transcriptional regulator;pseudo=true;transl_table=11 PYKB01000224.1 Genbank pseudogene 282 722 . + . ID=gene-C9F09_02435;Name=C9F09_02435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02435;pseudo=true PYKB01000224.1 Protein Homology CDS 282 722 . + 0 ID=cds-C9F09_02435;Parent=gene-C9F09_02435;Note=3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458804.1;locus_tag=C9F09_02435;product=ribonuclease R;pseudo=true;transl_table=11 ##sequence-region PYKB01001658.1 1 770 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001658.1 Genbank region 1 770 . + . ID=PYKB01001658.1:1..770;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001658.1 Genbank gene 1 770 . - . ID=gene-C9F09_28900;Name=C9F09_28900;end_range=770,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28900;partial=true;start_range=.,1 PYKB01001658.1 Protein Homology CDS 1 770 . - 2 ID=cds-TGC73362.1;Parent=gene-C9F09_28900;Dbxref=NCBI_GP:TGC73362.1;Name=TGC73362.1;Note=YegA%3B inner membrane protein involved in the assembly of outer membrane proteins (OMPs)%3B asmA-null mutants show low lipopolysaccharide (LPS) levels%2C suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity%2C resulting on altered assembly of OMPs;end_range=770,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456666.1;locus_tag=C9F09_28900;partial=true;product=outer membrane assembly protein AsmA;protein_id=TGC73362.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000796.1 1 768 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000796.1 Genbank region 1 768 . + . ID=PYKB01000796.1:1..768;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000796.1 Genbank gene 1 670 . - . ID=gene-C9F09_12360;Name=C9F09_12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12360;partial=true;start_range=.,1 PYKB01000796.1 Protein Homology CDS 1 670 . - 0 ID=cds-TGC92200.1;Parent=gene-C9F09_12360;Dbxref=NCBI_GP:TGC92200.1;Name=TGC92200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459146.1;locus_tag=C9F09_12360;partial=true;product=GMP reductase;protein_id=TGC92200.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000071.1 1 766 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000071.1 Genbank region 1 766 . + . ID=PYKB01000071.1:1..766;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000071.1 Genbank gene 1 155 . + . ID=gene-C9F09_00850;Name=C9F09_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00850;partial=true;start_range=.,1 PYKB01000071.1 Protein Homology CDS 1 155 . + 2 ID=cds-TGD06063.1;Parent=gene-C9F09_00850;Dbxref=NCBI_GP:TGD06063.1;Name=TGD06063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456837.1;locus_tag=C9F09_00850;partial=true;product=hypothetical protein;protein_id=TGD06063.1;start_range=.,1;transl_table=11 PYKB01000071.1 Genbank gene 270 766 . + . ID=gene-C9F09_00855;Name=C9F09_00855;end_range=766,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00855;partial=true PYKB01000071.1 Protein Homology CDS 270 766 . + 0 ID=cds-TGD06064.1;Parent=gene-C9F09_00855;Dbxref=NCBI_GP:TGD06064.1;Name=TGD06064.1;end_range=766,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456836.1;locus_tag=C9F09_00855;partial=true;product=competence/damage-inducible protein A;protein_id=TGD06064.1;transl_table=11 ##sequence-region PYKB01001323.1 1 763 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001323.1 Genbank region 1 763 . + . ID=PYKB01001323.1:1..763;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001323.1 Genbank gene 1 596 . + . ID=gene-C9F09_22705;Name=C9F09_22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22705;partial=true;start_range=.,1 PYKB01001323.1 Protein Homology CDS 1 596 . + 2 ID=cds-TGC81062.1;Parent=gene-C9F09_22705;Dbxref=NCBI_GP:TGC81062.1;Name=TGC81062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456736.1;locus_tag=C9F09_22705;partial=true;product=5-carboxymethyl-2-hydroxymuconate isomerase;protein_id=TGC81062.1;start_range=.,1;transl_table=11 PYKB01001323.1 Genbank gene 605 763 . + . ID=gene-C9F09_22710;Name=C9F09_22710;end_range=763,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22710;partial=true PYKB01001323.1 Protein Homology CDS 605 763 . + 0 ID=cds-TGC81063.1;Parent=gene-C9F09_22710;Dbxref=NCBI_GP:TGC81063.1;Name=TGC81063.1;end_range=763,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456735.1;locus_tag=C9F09_22710;partial=true;product=maleylacetoacetate isomerase;protein_id=TGC81063.1;transl_table=11 ##sequence-region PYKB01000408.1 1 763 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000408.1 Genbank region 1 763 . + . ID=PYKB01000408.1:1..763;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000408.1 Genbank gene 1 535 . - . ID=gene-C9F09_04660;Name=C9F09_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04660;partial=true;start_range=.,1 PYKB01000408.1 Protein Homology CDS 1 535 . - 0 ID=cds-TGC99463.1;Parent=gene-C9F09_04660;Dbxref=NCBI_GP:TGC99463.1;Name=TGC99463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=C9F09_04660;partial=true;product=arginine N-succinyltransferase;protein_id=TGC99463.1;start_range=.,1;transl_table=11 PYKB01000408.1 Genbank gene 526 763 . - . ID=gene-C9F09_04665;Name=C9F09_04665;end_range=763,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04665;partial=true PYKB01000408.1 Protein Homology CDS 526 763 . - 1 ID=cds-TGC99464.1;Parent=gene-C9F09_04665;Dbxref=NCBI_GP:TGC99464.1;Name=TGC99464.1;Note=catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate%3B also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate;end_range=763,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456209.1;locus_tag=C9F09_04665;partial=true;product=aspartate aminotransferase family protein;protein_id=TGC99464.1;transl_table=11 ##sequence-region PYKB01000117.1 1 760 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000117.1 Genbank region 1 760 . + . ID=PYKB01000117.1:1..760;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000117.1 Genbank gene 1 734 . - . ID=gene-C9F09_01325;Name=C9F09_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01325;partial=true;start_range=.,1 PYKB01000117.1 Protein Homology CDS 1 734 . - 0 ID=cds-TGD05151.1;Parent=gene-C9F09_01325;Dbxref=NCBI_GP:TGD05151.1;Name=TGD05151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001577974.1;locus_tag=C9F09_01325;partial=true;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=TGD05151.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000892.1 1 7255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000892.1 Genbank region 1 7255 . + . ID=PYKB01000892.1:1..7255;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000892.1 Genbank gene 1 440 . - . ID=gene-C9F09_14625;Name=C9F09_14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14625;partial=true;start_range=.,1 PYKB01000892.1 Protein Homology CDS 1 440 . - 0 ID=cds-TGC90383.1;Parent=gene-C9F09_14625;Dbxref=NCBI_GP:TGC90383.1;Name=TGC90383.1;Note=accepts sulfur from CsdA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=C9F09_14625;partial=true;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=TGC90383.1;start_range=.,1;transl_table=11 PYKB01000892.1 Genbank gene 550 1647 . - . ID=gene-C9F09_14630;Name=C9F09_14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14630 PYKB01000892.1 Protein Homology CDS 550 1647 . - 0 ID=cds-TGC90384.1;Parent=gene-C9F09_14630;Dbxref=NCBI_GP:TGC90384.1;Name=TGC90384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461907.1;locus_tag=C9F09_14630;product=murein transglycosylase A;protein_id=TGC90384.1;transl_table=11 PYKB01000892.1 Genbank gene 1855 1931 . + . ID=gene-C9F09_14635;Name=C9F09_14635;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_14635 PYKB01000892.1 tRNAscan-SE tRNA 1855 1931 . + . ID=rna-C9F09_14635;Parent=gene-C9F09_14635;anticodon=(pos:1889..1891);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_14635;product=tRNA-Met PYKB01000892.1 tRNAscan-SE exon 1855 1931 . + . ID=exon-C9F09_14635-1;Parent=rna-C9F09_14635;anticodon=(pos:1889..1891);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_14635;product=tRNA-Met PYKB01000892.1 Genbank gene 2044 3297 . - . ID=gene-C9F09_14640;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=C9F09_14640 PYKB01000892.1 Protein Homology CDS 2044 3297 . - 0 ID=cds-TGC90385.1;Parent=gene-C9F09_14640;Dbxref=NCBI_GP:TGC90385.1;Name=TGC90385.1;Note=hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=C9F09_14640;product=N-acetylmuramoyl-L-alanine amidase;protein_id=TGC90385.1;transl_table=11 PYKB01000892.1 Genbank gene 3530 4861 . + . ID=gene-C9F09_14645;Name=C9F09_14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14645 PYKB01000892.1 Protein Homology CDS 3530 4861 . + 0 ID=cds-TGC90386.1;Parent=gene-C9F09_14645;Dbxref=NCBI_GP:TGC90386.1;Name=TGC90386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=C9F09_14645;product=N-acetylglutamate synthase;protein_id=TGC90386.1;transl_table=11 PYKB01000892.1 Genbank gene 4964 6799 . - . ID=gene-C9F09_14650;Name=C9F09_14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14650 PYKB01000892.1 Protein Homology CDS 4964 6799 . - 0 ID=cds-TGC90387.1;Parent=gene-C9F09_14650;Dbxref=NCBI_GP:TGC90387.1;Name=TGC90387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155145.1;locus_tag=C9F09_14650;product=exodeoxyribonuclease V subunit alpha;protein_id=TGC90387.1;transl_table=11 PYKB01000892.1 Genbank gene 6796 7255 . - . ID=gene-C9F09_14655;Name=recB;end_range=7255,.;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=C9F09_14655;partial=true PYKB01000892.1 Protein Homology CDS 6796 7255 . - 1 ID=cds-TGC90388.1;Parent=gene-C9F09_14655;Dbxref=NCBI_GP:TGC90388.1;Name=TGC90388.1;Note=helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;end_range=7255,.;gbkey=CDS;gene=recB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457387.1;locus_tag=C9F09_14655;partial=true;product=exodeoxyribonuclease V subunit beta;protein_id=TGC90388.1;transl_table=11 ##sequence-region PYKB01000229.1 1 735 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000229.1 Genbank region 1 735 . + . ID=PYKB01000229.1:1..735;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000229.1 Genbank gene 1 735 . + . ID=gene-C9F09_02465;Name=psd;end_range=735,.;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=C9F09_02465;partial=true;start_range=.,1 PYKB01000229.1 Protein Homology CDS 1 735 . + 1 ID=cds-TGD03112.1;Parent=gene-C9F09_02465;Dbxref=NCBI_GP:TGD03112.1;Name=TGD03112.1;end_range=735,.;gbkey=CDS;gene=psd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=C9F09_02465;partial=true;product=phosphatidylserine decarboxylase;protein_id=TGD03112.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001246.1 1 756 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001246.1 Genbank region 1 756 . + . ID=PYKB01001246.1:1..756;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001246.1 Genbank pseudogene 1 756 . + . ID=gene-C9F09_21250;Name=C9F09_21250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21250;pseudo=true PYKB01001246.1 Protein Homology CDS 1 756 . + 2 ID=cds-C9F09_21250;Parent=gene-C9F09_21250;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=C9F09_21250;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000772.1 1 755 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000772.1 Genbank region 1 755 . + . ID=PYKB01000772.1:1..755;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000772.1 Genbank gene 1 386 . + . ID=gene-C9F09_11970;Name=C9F09_11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11970;partial=true;start_range=.,1 PYKB01000772.1 Protein Homology CDS 1 386 . + 2 ID=cds-TGC92573.1;Parent=gene-C9F09_11970;Dbxref=NCBI_GP:TGC92573.1;Name=TGC92573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=C9F09_11970;partial=true;product=two-component sensor histidine kinase;protein_id=TGC92573.1;start_range=.,1;transl_table=11 PYKB01000772.1 Genbank gene 559 755 . + . ID=gene-C9F09_11975;Name=C9F09_11975;end_range=755,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11975;partial=true PYKB01000772.1 Protein Homology CDS 559 755 . + 0 ID=cds-TGC92574.1;Parent=gene-C9F09_11975;Dbxref=NCBI_GP:TGC92574.1;Name=TGC92574.1;end_range=755,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455591.1;locus_tag=C9F09_11975;partial=true;product=dipeptidase;protein_id=TGC92574.1;transl_table=11 ##sequence-region PYKB01000032.1 1 755 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000032.1 Genbank region 1 755 . + . ID=PYKB01000032.1:1..755;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000032.1 Genbank gene 1 213 . - . ID=gene-C9F09_00395;Name=C9F09_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00395;partial=true;start_range=.,1 PYKB01000032.1 Protein Homology CDS 1 213 . - 0 ID=cds-TGD06818.1;Parent=gene-C9F09_00395;Dbxref=NCBI_GP:TGD06818.1;Name=TGD06818.1;Note=sodium:branched-chain amino acid symporter;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454993.1;locus_tag=C9F09_00395;partial=true;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=TGD06818.1;start_range=.,1;transl_table=11 PYKB01000032.1 Genbank gene 456 668 . + . ID=gene-C9F09_00400;Name=C9F09_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00400 PYKB01000032.1 Protein Homology CDS 456 668 . + 0 ID=cds-TGD06819.1;Parent=gene-C9F09_00400;Dbxref=NCBI_GP:TGD06819.1;Name=TGD06819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311463.1;locus_tag=C9F09_00400;product=hypothetical protein;protein_id=TGD06819.1;transl_table=11 PYKB01000032.1 Genbank gene 622 755 . - . ID=gene-C9F09_00405;Name=C9F09_00405;end_range=755,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00405;partial=true PYKB01000032.1 Protein Homology CDS 622 755 . - 2 ID=cds-TGD06820.1;Parent=gene-C9F09_00405;Dbxref=NCBI_GP:TGD06820.1;Name=TGD06820.1;end_range=755,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454992.1;locus_tag=C9F09_00405;partial=true;product=ATP-binding protein;protein_id=TGD06820.1;transl_table=11 ##sequence-region PYKB01001225.1 1 754 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001225.1 Genbank region 1 754 . + . ID=PYKB01001225.1:1..754;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001225.1 Genbank gene 1 379 . - . ID=gene-C9F09_20740;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=C9F09_20740;partial=true;start_range=.,1 PYKB01001225.1 Protein Homology CDS 1 379 . - 0 ID=cds-TGC83004.1;Parent=gene-C9F09_20740;Dbxref=NCBI_GP:TGC83004.1;Name=TGC83004.1;Note=with PduCE catalyzes the formation of propionaldehyde from 1%2C2-propanediol;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456591.1;locus_tag=C9F09_20740;partial=true;product=propanediol dehydratase;protein_id=TGC83004.1;start_range=.,1;transl_table=11 PYKB01001225.1 Genbank gene 390 754 . - . ID=gene-C9F09_20745;Name=pduC;end_range=754,.;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=C9F09_20745;partial=true PYKB01001225.1 Protein Homology CDS 390 754 . - 2 ID=cds-TGC83005.1;Parent=gene-C9F09_20745;Dbxref=NCBI_GP:TGC83005.1;Name=TGC83005.1;Note=with pduED catalyzes the formation of propionaldehyde from 1%2C2-propanediol;end_range=754,.;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456590.1;locus_tag=C9F09_20745;partial=true;product=propanediol dehydratase;protein_id=TGC83005.1;transl_table=11 ##sequence-region PYKB01000299.1 1 749 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000299.1 Genbank region 1 749 . + . ID=PYKB01000299.1:1..749;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000299.1 Genbank gene 1 456 . + . ID=gene-C9F09_03385;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=C9F09_03385;partial=true;start_range=.,1 PYKB01000299.1 Protein Homology CDS 1 456 . + 0 ID=cds-TGD01472.1;Parent=gene-C9F09_03385;Dbxref=NCBI_GP:TGD01472.1;Name=TGD01472.1;Note=outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone;gbkey=CDS;gene=lolD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455710.1;locus_tag=C9F09_03385;partial=true;product=lipoprotein-releasing system ATP-binding protein LolD;protein_id=TGD01472.1;start_range=.,1;transl_table=11 PYKB01000299.1 Genbank pseudogene 456 734 . + . ID=gene-C9F09_03390;Name=C9F09_03390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03390;pseudo=true PYKB01000299.1 Protein Homology CDS 456 734 . + 0 ID=cds-C9F09_03390;Parent=gene-C9F09_03390;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455711.1;locus_tag=C9F09_03390;product=lipoprotein-releasing system transmembrane subunit LolE;pseudo=true;transl_table=11 ##sequence-region PYKB01000201.1 1 749 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000201.1 Genbank region 1 749 . + . ID=PYKB01000201.1:1..749;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000201.1 Genbank pseudogene 1 679 . - . ID=gene-C9F09_02205;Name=C9F09_02205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02205;pseudo=true PYKB01000201.1 Protein Homology CDS 1 679 . - 0 ID=cds-C9F09_02205;Parent=gene-C9F09_02205;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455246.1;locus_tag=C9F09_02205;product=PTS N-acetyl glucosamine transporter subunit IIABC;pseudo=true;transl_table=11 ##sequence-region PYKB01000647.1 1 747 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000647.1 Genbank region 1 747 . + . ID=PYKB01000647.1:1..747;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000647.1 Genbank gene 1 414 . - . ID=gene-C9F09_09700;Name=C9F09_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09700;partial=true;start_range=.,1 PYKB01000647.1 Protein Homology CDS 1 414 . - 0 ID=cds-TGC94427.1;Parent=gene-C9F09_09700;Dbxref=NCBI_GP:TGC94427.1;Name=TGC94427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456324.1;locus_tag=C9F09_09700;partial=true;product=ribonuclease D;protein_id=TGC94427.1;start_range=.,1;transl_table=11 PYKB01000647.1 Genbank gene 487 747 . - . ID=gene-C9F09_09705;Name=C9F09_09705;end_range=747,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09705;partial=true PYKB01000647.1 Protein Homology CDS 487 747 . - 0 ID=cds-TGC94426.1;Parent=gene-C9F09_09705;Dbxref=NCBI_GP:TGC94426.1;Name=TGC94426.1;Note=Activates fatty acids by binding to coenzyme A;end_range=747,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456325.1;locus_tag=C9F09_09705;partial=true;product=long-chain-fatty-acid--CoA ligase;protein_id=TGC94426.1;transl_table=11 ##sequence-region PYKB01000568.1 1 745 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000568.1 Genbank region 1 745 . + . ID=PYKB01000568.1:1..745;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000568.1 Genbank gene 1 239 . - . ID=gene-C9F09_08005;Name=C9F09_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08005;partial=true;start_range=.,1 PYKB01000568.1 Protein Homology CDS 1 239 . - 0 ID=cds-TGC96088.1;Parent=gene-C9F09_08005;Dbxref=NCBI_GP:TGC96088.1;Name=TGC96088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=C9F09_08005;partial=true;product=DUF421 domain-containing protein;protein_id=TGC96088.1;start_range=.,1;transl_table=11 PYKB01000568.1 Genbank pseudogene 376 681 . + . ID=gene-C9F09_08010;Name=C9F09_08010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08010;pseudo=true PYKB01000568.1 Protein Homology CDS 376 681 . + 0 ID=cds-C9F09_08010;Parent=gene-C9F09_08010;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=C9F09_08010;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001227.1 1 744 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001227.1 Genbank region 1 744 . + . ID=PYKB01001227.1:1..744;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001227.1 Genbank gene 57 314 . + . ID=gene-C9F09_20760;Name=C9F09_20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20760 PYKB01001227.1 Protein Homology CDS 57 314 . + 0 ID=cds-TGC82982.1;Parent=gene-C9F09_20760;Dbxref=NCBI_GP:TGC82982.1;Name=TGC82982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007369914.1;locus_tag=C9F09_20760;product=50S ribosomal protein L27;protein_id=TGC82982.1;transl_table=11 PYKB01001227.1 Genbank gene 444 744 . + . ID=gene-C9F09_20765;Name=C9F09_20765;end_range=744,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20765;partial=true PYKB01001227.1 Protein Homology CDS 444 744 . + 0 ID=cds-TGC82983.1;Parent=gene-C9F09_20765;Dbxref=NCBI_GP:TGC82983.1;Name=TGC82983.1;end_range=744,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=C9F09_20765;partial=true;product=EamA family transporter;protein_id=TGC82983.1;transl_table=11 ##sequence-region PYKB01000741.1 1 7252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000741.1 Genbank region 1 7252 . + . ID=PYKB01000741.1:1..7252;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000741.1 Genbank gene 1 194 . + . ID=gene-C9F09_11415;Name=C9F09_11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11415;partial=true;start_range=.,1 PYKB01000741.1 Protein Homology CDS 1 194 . + 2 ID=cds-TGC93088.1;Parent=gene-C9F09_11415;Dbxref=NCBI_GP:TGC93088.1;Name=TGC93088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310038.1;locus_tag=C9F09_11415;partial=true;product=phosphatidate cytidylyltransferase;protein_id=TGC93088.1;start_range=.,1;transl_table=11 PYKB01000741.1 Genbank gene 201 857 . + . ID=gene-C9F09_11420;Name=C9F09_11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11420 PYKB01000741.1 Protein Homology CDS 201 857 . + 0 ID=cds-TGC93089.1;Parent=gene-C9F09_11420;Dbxref=NCBI_GP:TGC93089.1;Name=TGC93089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015702890.1;locus_tag=C9F09_11420;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=TGC93089.1;transl_table=11 PYKB01000741.1 Genbank gene 832 2592 . + . ID=gene-C9F09_11425;Name=C9F09_11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11425 PYKB01000741.1 Protein Homology CDS 832 2592 . + 0 ID=cds-TGC93090.1;Parent=gene-C9F09_11425;Dbxref=NCBI_GP:TGC93090.1;Name=TGC93090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008812691.1;locus_tag=C9F09_11425;product=hypothetical protein;protein_id=TGC93090.1;transl_table=11 PYKB01000741.1 Genbank gene 2582 3892 . + . ID=gene-C9F09_11430;Name=C9F09_11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11430 PYKB01000741.1 Protein Homology CDS 2582 3892 . + 0 ID=cds-TGC93091.1;Parent=gene-C9F09_11430;Dbxref=NCBI_GP:TGC93091.1;Name=TGC93091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835230.1;locus_tag=C9F09_11430;product=hypothetical protein;protein_id=TGC93091.1;transl_table=11 PYKB01000741.1 Genbank gene 4000 4287 . + . ID=gene-C9F09_11435;Name=C9F09_11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11435 PYKB01000741.1 Protein Homology CDS 4000 4287 . + 0 ID=cds-TGC93092.1;Parent=gene-C9F09_11435;Dbxref=NCBI_GP:TGC93092.1;Name=TGC93092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835231.1;locus_tag=C9F09_11435;product=hypothetical protein;protein_id=TGC93092.1;transl_table=11 PYKB01000741.1 Genbank gene 4346 4951 . - . ID=gene-C9F09_11440;Name=C9F09_11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11440 PYKB01000741.1 Protein Homology CDS 4346 4951 . - 0 ID=cds-TGC93093.1;Parent=gene-C9F09_11440;Dbxref=NCBI_GP:TGC93093.1;Name=TGC93093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455862.1;locus_tag=C9F09_11440;product=FMN-dependent NADH-azoreductase;protein_id=TGC93093.1;transl_table=11 PYKB01000741.1 Genbank gene 5152 7252 . + . ID=gene-C9F09_11445;Name=hrpA;end_range=7252,.;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=C9F09_11445;partial=true PYKB01000741.1 Protein Homology CDS 5152 7252 . + 0 ID=cds-TGC93094.1;Parent=gene-C9F09_11445;Dbxref=NCBI_GP:TGC93094.1;Name=TGC93094.1;end_range=7252,.;gbkey=CDS;gene=hrpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=C9F09_11445;partial=true;product=ATP-dependent RNA helicase HrpA;protein_id=TGC93094.1;transl_table=11 ##sequence-region PYKB01000859.1 1 15099 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000859.1 Genbank region 1 15099 . + . ID=PYKB01000859.1:1..15099;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000859.1 Genbank gene 1 261 . - . ID=gene-C9F09_13715;Name=C9F09_13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13715;partial=true;start_range=.,1 PYKB01000859.1 Protein Homology CDS 1 261 . - 0 ID=cds-TGC91042.1;Parent=gene-C9F09_13715;Dbxref=NCBI_GP:TGC91042.1;Name=TGC91042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456632.1;locus_tag=C9F09_13715;partial=true;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=TGC91042.1;start_range=.,1;transl_table=11 PYKB01000859.1 Genbank gene 262 1206 . - . ID=gene-C9F09_13720;Name=rfbN;gbkey=Gene;gene=rfbN;gene_biotype=protein_coding;locus_tag=C9F09_13720 PYKB01000859.1 Protein Homology CDS 262 1206 . - 0 ID=cds-TGC91043.1;Parent=gene-C9F09_13720;Dbxref=NCBI_GP:TGC91043.1;Name=TGC91043.1;gbkey=CDS;gene=rfbN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461030.1;locus_tag=C9F09_13720;product=O antigen biosynthesis rhamnosyltransferase RfbN;protein_id=TGC91043.1;transl_table=11 PYKB01000859.1 Genbank gene 1207 2268 . - . ID=gene-C9F09_13725;Name=C9F09_13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13725 PYKB01000859.1 Protein Homology CDS 1207 2268 . - 0 ID=cds-TGC91044.1;Parent=gene-C9F09_13725;Dbxref=NCBI_GP:TGC91044.1;Name=TGC91044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461031.1;locus_tag=C9F09_13725;product=protein RfbU;protein_id=TGC91044.1;transl_table=11 PYKB01000859.1 Genbank gene 2589 3590 . - . ID=gene-C9F09_13730;Name=rfbV;gbkey=Gene;gene=rfbV;gene_biotype=protein_coding;locus_tag=C9F09_13730 PYKB01000859.1 Protein Homology CDS 2589 3590 . - 0 ID=cds-TGC91045.1;Parent=gene-C9F09_13730;Dbxref=NCBI_GP:TGC91045.1;Name=TGC91045.1;gbkey=CDS;gene=rfbV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461032.1;locus_tag=C9F09_13730;product=abequosyltransferase RfbV;protein_id=TGC91045.1;transl_table=11 PYKB01000859.1 Genbank gene 3595 4887 . - . ID=gene-C9F09_13735;Name=C9F09_13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13735 PYKB01000859.1 Protein Homology CDS 3595 4887 . - 0 ID=cds-TGC91046.1;Parent=gene-C9F09_13735;Dbxref=NCBI_GP:TGC91046.1;Name=TGC91046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461033.1;locus_tag=C9F09_13735;product=transporter;protein_id=TGC91046.1;transl_table=11 PYKB01000859.1 Genbank gene 4969 5868 . - . ID=gene-C9F09_13740;Name=C9F09_13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13740 PYKB01000859.1 Protein Homology CDS 4969 5868 . - 0 ID=cds-TGC91047.1;Parent=gene-C9F09_13740;Dbxref=NCBI_GP:TGC91047.1;Name=TGC91047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461034.1;locus_tag=C9F09_13740;product=CDP-abequose synthase;protein_id=TGC91047.1;transl_table=11 PYKB01000859.1 Genbank gene 5896 7209 . - . ID=gene-C9F09_13745;Name=C9F09_13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13745 PYKB01000859.1 Protein Homology CDS 5896 7209 . - 0 ID=cds-TGC91048.1;Parent=gene-C9F09_13745;Dbxref=NCBI_GP:TGC91048.1;Name=TGC91048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461035.1;locus_tag=C9F09_13745;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=TGC91048.1;transl_table=11 PYKB01000859.1 Genbank gene 7236 8315 . - . ID=gene-C9F09_13750;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=C9F09_13750 PYKB01000859.1 Protein Homology CDS 7236 8315 . - 0 ID=cds-TGC91049.1;Parent=gene-C9F09_13750;Dbxref=NCBI_GP:TGC91049.1;Name=TGC91049.1;gbkey=CDS;gene=rfbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461036.1;locus_tag=C9F09_13750;product=CDP-glucose 4%2C6-dehydratase;protein_id=TGC91049.1;transl_table=11 PYKB01000859.1 Genbank gene 8320 9093 . - . ID=gene-C9F09_13755;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=C9F09_13755 PYKB01000859.1 Protein Homology CDS 8320 9093 . - 0 ID=cds-TGC91050.1;Parent=gene-C9F09_13755;Dbxref=NCBI_GP:TGC91050.1;Name=TGC91050.1;gbkey=CDS;gene=rfbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461037.1;locus_tag=C9F09_13755;product=glucose-1-phosphate cytidylyltransferase;protein_id=TGC91050.1;transl_table=11 PYKB01000859.1 Genbank gene 9090 10082 . - . ID=gene-C9F09_13760;Name=C9F09_13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13760 PYKB01000859.1 Protein Homology CDS 9090 10082 . - 0 ID=cds-TGC91051.1;Parent=gene-C9F09_13760;Dbxref=NCBI_GP:TGC91051.1;Name=TGC91051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461038.1;locus_tag=C9F09_13760;product=protein RfbI;protein_id=TGC91051.1;transl_table=11 PYKB01000859.1 Genbank gene 10088 10639 . - . ID=gene-C9F09_13765;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=C9F09_13765 PYKB01000859.1 Protein Homology CDS 10088 10639 . - 0 ID=cds-TGC91052.1;Parent=gene-C9F09_13765;Dbxref=NCBI_GP:TGC91052.1;Name=TGC91052.1;gbkey=CDS;gene=rfbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456643.1;locus_tag=C9F09_13765;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=TGC91052.1;transl_table=11 PYKB01000859.1 Genbank gene 10640 11518 . - . ID=gene-C9F09_13770;Name=C9F09_13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13770 PYKB01000859.1 Protein Homology CDS 10640 11518 . - 0 ID=cds-TGC91056.1;Parent=gene-C9F09_13770;Dbxref=NCBI_GP:TGC91056.1;Name=TGC91056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461040.1;locus_tag=C9F09_13770;product=glucose-1-phosphate thymidylyltransferase;protein_id=TGC91056.1;transl_table=11 PYKB01000859.1 Genbank gene 11566 12465 . - . ID=gene-C9F09_13775;Name=C9F09_13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13775 PYKB01000859.1 Protein Homology CDS 11566 12465 . - 0 ID=cds-TGC91053.1;Parent=gene-C9F09_13775;Dbxref=NCBI_GP:TGC91053.1;Name=TGC91053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=C9F09_13775;product=dTDP-4-dehydrorhamnose reductase;protein_id=TGC91053.1;transl_table=11 PYKB01000859.1 Genbank gene 12465 13550 . - . ID=gene-C9F09_13780;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=C9F09_13780 PYKB01000859.1 Protein Homology CDS 12465 13550 . - 0 ID=cds-TGC91054.1;Parent=gene-C9F09_13780;Dbxref=NCBI_GP:TGC91054.1;Name=TGC91054.1;gbkey=CDS;gene=rfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456646.1;locus_tag=C9F09_13780;product=dTDP-glucose 4%2C6-dehydratase;protein_id=TGC91054.1;transl_table=11 PYKB01000859.1 Genbank gene 13927 14820 . - . ID=gene-C9F09_13785;Name=C9F09_13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13785 PYKB01000859.1 Protein Homology CDS 13927 14820 . - 0 ID=cds-TGC91055.1;Parent=gene-C9F09_13785;Dbxref=NCBI_GP:TGC91055.1;Name=TGC91055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456647.1;locus_tag=C9F09_13785;product=GalU regulator GalF;protein_id=TGC91055.1;transl_table=11 ##sequence-region PYKB01000319.1 1 743 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000319.1 Genbank region 1 743 . + . ID=PYKB01000319.1:1..743;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000319.1 Genbank gene 88 743 . + . ID=gene-C9F09_03580;Name=C9F09_03580;end_range=743,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03580;partial=true PYKB01000319.1 Protein Homology CDS 88 743 . + 0 ID=cds-TGD01170.1;Parent=gene-C9F09_03580;Dbxref=NCBI_GP:TGD01170.1;Name=TGD01170.1;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity;end_range=743,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457957.1;locus_tag=C9F09_03580;partial=true;product=primosomal protein N';protein_id=TGD01170.1;transl_table=11 ##sequence-region PYKB01001508.1 1 741 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001508.1 Genbank region 1 741 . + . ID=PYKB01001508.1:1..741;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001508.1 Genbank gene 1 741 . - . ID=gene-C9F09_26205;Name=C9F09_26205;end_range=741,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26205;partial=true;start_range=.,1 PYKB01001508.1 Protein Homology CDS 1 741 . - 1 ID=cds-TGC77053.1;Parent=gene-C9F09_26205;Dbxref=NCBI_GP:TGC77053.1;Name=TGC77053.1;end_range=741,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459348.1;locus_tag=C9F09_26205;partial=true;product=ATPase;protein_id=TGC77053.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001478.1 1 737 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001478.1 Genbank region 1 737 . + . ID=PYKB01001478.1:1..737;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001478.1 Genbank gene 1 737 . - . ID=gene-C9F09_25695;Name=C9F09_25695;end_range=737,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25695;partial=true;start_range=.,1 PYKB01001478.1 Protein Homology CDS 1 737 . - 0 ID=cds-TGC77705.1;Parent=gene-C9F09_25695;Dbxref=NCBI_GP:TGC77705.1;Name=TGC77705.1;end_range=737,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=C9F09_25695;partial=true;product=Fis family transcriptional regulator;protein_id=TGC77705.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000057.1 1 736 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000057.1 Genbank region 1 736 . + . ID=PYKB01000057.1:1..736;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000057.1 Genbank gene 1 736 . + . ID=gene-C9F09_00655;Name=C9F09_00655;end_range=736,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00655;partial=true;start_range=.,1 PYKB01000057.1 Protein Homology CDS 1 736 . + 2 ID=cds-TGD06336.1;Parent=gene-C9F09_00655;Dbxref=NCBI_GP:TGD06336.1;Name=TGD06336.1;end_range=736,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455075.1;locus_tag=C9F09_00655;partial=true;product=mechanosensitive channel MscK;protein_id=TGD06336.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000899.1 1 736 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000899.1 Genbank region 1 736 . + . ID=PYKB01000899.1:1..736;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000899.1 Genbank gene 1 601 . + . ID=gene-C9F09_14805;Name=C9F09_14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14805;partial=true;start_range=.,1 PYKB01000899.1 Protein Homology CDS 1 601 . + 1 ID=cds-TGC90192.1;Parent=gene-C9F09_14805;Dbxref=NCBI_GP:TGC90192.1;Name=TGC90192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=C9F09_14805;partial=true;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase;protein_id=TGC90192.1;start_range=.,1;transl_table=11 PYKB01000899.1 Genbank gene 604 736 . + . ID=gene-C9F09_14810;Name=C9F09_14810;end_range=736,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14810;partial=true PYKB01000899.1 Protein Homology CDS 604 736 . + 0 ID=cds-TGC90193.1;Parent=gene-C9F09_14810;Dbxref=NCBI_GP:TGC90193.1;Name=TGC90193.1;Note=required for efficient enterobactin production;end_range=736,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455175.1;locus_tag=C9F09_14810;partial=true;product=thioesterase;protein_id=TGC90193.1;transl_table=11 ##sequence-region PYKB01000417.1 1 735 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000417.1 Genbank region 1 735 . + . ID=PYKB01000417.1:1..735;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000417.1 Genbank gene 30 735 . + . ID=gene-C9F09_04790;Name=C9F09_04790;end_range=735,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04790;partial=true PYKB01000417.1 Protein Homology CDS 30 735 . + 0 ID=cds-TGC99312.1;Parent=gene-C9F09_04790;Dbxref=NCBI_GP:TGC99312.1;Name=TGC99312.1;end_range=735,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457028.1;locus_tag=C9F09_04790;partial=true;product=AI-2E family transporter;protein_id=TGC99312.1;transl_table=11 ##sequence-region PYKB01001714.1 1 731 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001714.1 Genbank region 1 731 . + . ID=PYKB01001714.1:1..731;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001714.1 Genbank gene 1 731 . + . ID=gene-C9F09_29995;Name=C9F09_29995;end_range=731,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29995;partial=true;start_range=.,1 PYKB01001714.1 Protein Homology CDS 1 731 . + 2 ID=cds-TGC71514.1;Parent=gene-C9F09_29995;Dbxref=NCBI_GP:TGC71514.1;Name=TGC71514.1;end_range=731,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=C9F09_29995;partial=true;product=CTP synthase;protein_id=TGC71514.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000807.1 1 730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000807.1 Genbank region 1 730 . + . ID=PYKB01000807.1:1..730;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000807.1 Genbank gene 1 730 . - . ID=gene-C9F09_12590;Name=sufB;end_range=730,.;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=C9F09_12590;partial=true;start_range=.,1 PYKB01000807.1 Protein Homology CDS 1 730 . - 1 ID=cds-TGC92053.1;Parent=gene-C9F09_12590;Dbxref=NCBI_GP:TGC92053.1;Name=TGC92053.1;end_range=730,.;gbkey=CDS;gene=sufB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=C9F09_12590;partial=true;product=Fe-S cluster assembly protein SufB;protein_id=TGC92053.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000191.1 1 723 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000191.1 Genbank region 1 723 . + . ID=PYKB01000191.1:1..723;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000191.1 Genbank gene 1 723 . - . ID=gene-C9F09_02140;Name=pduF;end_range=723,.;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=C9F09_02140;partial=true;start_range=.,1 PYKB01000191.1 Protein Homology CDS 1 723 . - 1 ID=cds-TGD03811.1;Parent=gene-C9F09_02140;Dbxref=NCBI_GP:TGD03811.1;Name=TGD03811.1;end_range=723,.;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=C9F09_02140;partial=true;product=propanediol diffusion facilitator PduF;protein_id=TGD03811.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000623.1 1 723 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000623.1 Genbank region 1 723 . + . ID=PYKB01000623.1:1..723;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000623.1 Genbank gene 1 570 . - . ID=gene-C9F09_09255;Name=C9F09_09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09255;partial=true;start_range=.,1 PYKB01000623.1 Protein Homology CDS 1 570 . - 0 ID=cds-TGC94866.1;Parent=gene-C9F09_09255;Dbxref=NCBI_GP:TGC94866.1;Name=TGC94866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457477.1;locus_tag=C9F09_09255;partial=true;product=metalloprotease;protein_id=TGC94866.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000767.1 1 7248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000767.1 Genbank region 1 7248 . + . ID=PYKB01000767.1:1..7248;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000767.1 Genbank gene 1 262 . + . ID=gene-C9F09_11885;Name=C9F09_11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11885;partial=true;start_range=.,1 PYKB01000767.1 Protein Homology CDS 1 262 . + 1 ID=cds-TGC92642.1;Parent=gene-C9F09_11885;Dbxref=NCBI_GP:TGC92642.1;Name=TGC92642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=C9F09_11885;partial=true;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=TGC92642.1;start_range=.,1;transl_table=11 PYKB01000767.1 Genbank gene 262 1131 . + . ID=gene-C9F09_11890;Name=C9F09_11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11890 PYKB01000767.1 Protein Homology CDS 262 1131 . + 0 ID=cds-TGC92643.1;Parent=gene-C9F09_11890;Dbxref=NCBI_GP:TGC92643.1;Name=TGC92643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=C9F09_11890;product=succinate--CoA ligase subunit alpha;protein_id=TGC92643.1;transl_table=11 PYKB01000767.1 Genbank pseudogene 1466 1570 . + . ID=gene-C9F09_11895;Name=C9F09_11895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11895;pseudo=true PYKB01000767.1 Protein Homology CDS 1466 1570 . + 0 ID=cds-C9F09_11895;Parent=gene-C9F09_11895;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022931.1;locus_tag=C9F09_11895;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 PYKB01000767.1 Genbank gene 2714 4282 . + . ID=gene-C9F09_11900;Name=C9F09_11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11900 PYKB01000767.1 Protein Homology CDS 2714 4282 . + 0 ID=cds-TGC92644.1;Parent=gene-C9F09_11900;Dbxref=NCBI_GP:TGC92644.1;Name=TGC92644.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125442.1;locus_tag=C9F09_11900;product=cytochrome bd-I ubiquinol oxidase subunit CydA;protein_id=TGC92644.1;transl_table=11 PYKB01000767.1 Genbank gene 4298 5437 . + . ID=gene-C9F09_11905;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=C9F09_11905 PYKB01000767.1 Protein Homology CDS 4298 5437 . + 0 ID=cds-TGC92645.1;Parent=gene-C9F09_11905;Dbxref=NCBI_GP:TGC92645.1;Name=TGC92645.1;gbkey=CDS;gene=cydB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=C9F09_11905;product=cytochrome d ubiquinol oxidase subunit II;protein_id=TGC92645.1;transl_table=11 PYKB01000767.1 Genbank gene 5452 5565 . + . ID=gene-C9F09_11910;Name=C9F09_11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11910 PYKB01000767.1 Protein Homology CDS 5452 5565 . + 0 ID=cds-TGC92646.1;Parent=gene-C9F09_11910;Dbxref=NCBI_GP:TGC92646.1;Name=TGC92646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455298.1;locus_tag=C9F09_11910;product=cytochrome bd-I oxidase subunit CydX;protein_id=TGC92646.1;transl_table=11 PYKB01000767.1 Genbank gene 5565 5858 . + . ID=gene-C9F09_11915;Name=C9F09_11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11915 PYKB01000767.1 Protein Homology CDS 5565 5858 . + 0 ID=cds-TGC92647.1;Parent=gene-C9F09_11915;Dbxref=NCBI_GP:TGC92647.1;Name=TGC92647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=C9F09_11915;product=cyd operon protein YbgE;protein_id=TGC92647.1;transl_table=11 PYKB01000767.1 Genbank gene 6087 6491 . + . ID=gene-C9F09_11920;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=C9F09_11920 PYKB01000767.1 Protein Homology CDS 6087 6491 . + 0 ID=cds-TGC92648.1;Parent=gene-C9F09_11920;Dbxref=NCBI_GP:TGC92648.1;Name=TGC92648.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=C9F09_11920;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=TGC92648.1;transl_table=11 PYKB01000767.1 Genbank gene 6488 7180 . + . ID=gene-C9F09_11925;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=C9F09_11925 PYKB01000767.1 Protein Homology CDS 6488 7180 . + 0 ID=cds-TGC92649.1;Parent=gene-C9F09_11925;Dbxref=NCBI_GP:TGC92649.1;Name=TGC92649.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455301.1;locus_tag=C9F09_11925;product=Tol-Pal system subunit TolQ;protein_id=TGC92649.1;transl_table=11 ##sequence-region PYKB01000127.1 1 717 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000127.1 Genbank region 1 717 . + . ID=PYKB01000127.1:1..717;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000127.1 Genbank gene 31 717 . + . ID=gene-C9F09_01455;Name=C9F09_01455;end_range=717,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01455;partial=true PYKB01000127.1 Protein Homology CDS 31 717 . + 0 ID=cds-TGD04937.1;Parent=gene-C9F09_01455;Dbxref=NCBI_GP:TGD04937.1;Name=TGD04937.1;end_range=717,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456986.1;locus_tag=C9F09_01455;partial=true;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=TGD04937.1;transl_table=11 ##sequence-region PYKB01000962.1 1 711 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000962.1 Genbank region 1 711 . + . ID=PYKB01000962.1:1..711;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000962.1 Genbank gene 477 711 . + . ID=gene-C9F09_15955;Name=C9F09_15955;end_range=711,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15955;partial=true PYKB01000962.1 Protein Homology CDS 477 711 . + 0 ID=cds-TGC89040.1;Parent=gene-C9F09_15955;Dbxref=NCBI_GP:TGC89040.1;Name=TGC89040.1;end_range=711,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457370.1;locus_tag=C9F09_15955;partial=true;product=MFS transporter;protein_id=TGC89040.1;transl_table=11 ##sequence-region PYKB01000611.1 1 711 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000611.1 Genbank region 1 711 . + . ID=PYKB01000611.1:1..711;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000611.1 Genbank gene 1 711 . + . ID=gene-C9F09_09035;Name=purH;end_range=711,.;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=C9F09_09035;partial=true;start_range=.,1 PYKB01000611.1 Protein Homology CDS 1 711 . + 2 ID=cds-TGC95125.1;Parent=gene-C9F09_09035;Dbxref=NCBI_GP:TGC95125.1;Name=TGC95125.1;Note=involved in de novo purine biosynthesis;end_range=711,.;gbkey=CDS;gene=purH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=C9F09_09035;partial=true;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase;protein_id=TGC95125.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001334.1 1 708 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001334.1 Genbank region 1 708 . + . ID=PYKB01001334.1:1..708;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001334.1 Genbank gene 1 516 . - . ID=gene-C9F09_22950;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=C9F09_22950;partial=true;start_range=.,1 PYKB01001334.1 Protein Homology CDS 1 516 . - 0 ID=cds-TGC80861.1;Parent=gene-C9F09_22950;Dbxref=NCBI_GP:TGC80861.1;Name=TGC80861.1;gbkey=CDS;gene=tsaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456327.1;locus_tag=C9F09_22950;partial=true;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=TGC80861.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000190.1 1 708 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000190.1 Genbank region 1 708 . + . ID=PYKB01000190.1:1..708;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000190.1 Genbank pseudogene 4 708 . - . ID=gene-C9F09_02135;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=pseudogene;locus_tag=C9F09_02135;pseudo=true PYKB01000190.1 Protein Homology CDS 4 708 . - 0 ID=cds-C9F09_02135;Parent=gene-C9F09_02135;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=coaBC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462630.3;locus_tag=C9F09_02135;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;pseudo=true;transl_table=11 ##sequence-region PYKB01000220.1 1 706 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000220.1 Genbank region 1 706 . + . ID=PYKB01000220.1:1..706;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000220.1 Genbank gene 1 361 . - . ID=gene-C9F09_02350;Name=C9F09_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02350;partial=true;start_range=.,1 PYKB01000220.1 Protein Homology CDS 1 361 . - 0 ID=cds-TGD03338.1;Parent=gene-C9F09_02350;Dbxref=NCBI_GP:TGD03338.1;Name=TGD03338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457633.1;locus_tag=C9F09_02350;partial=true;product=glycerate kinase;protein_id=TGD03338.1;start_range=.,1;transl_table=11 PYKB01000220.1 Genbank gene 459 706 . - . ID=gene-C9F09_02355;Name=garR;end_range=706,.;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=C9F09_02355;partial=true PYKB01000220.1 Protein Homology CDS 459 706 . - 2 ID=cds-TGD03339.1;Parent=gene-C9F09_02355;Dbxref=NCBI_GP:TGD03339.1;Name=TGD03339.1;Note=catalyzes the reduction of tartronate semialdehyde to glycerate;end_range=706,.;gbkey=CDS;gene=garR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=C9F09_02355;partial=true;product=2-hydroxy-3-oxopropionate reductase;protein_id=TGD03339.1;transl_table=11 ##sequence-region PYKB01000997.1 1 645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000997.1 Genbank region 1 645 . + . ID=PYKB01000997.1:1..645;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000997.1 Genbank gene 1 202 . + . ID=gene-C9F09_16645;Name=C9F09_16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16645;partial=true;start_range=.,1 PYKB01000997.1 Protein Homology CDS 1 202 . + 1 ID=cds-TGC88229.1;Parent=gene-C9F09_16645;Dbxref=NCBI_GP:TGC88229.1;Name=TGC88229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454785.1;locus_tag=C9F09_16645;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGC88229.1;start_range=.,1;transl_table=11 PYKB01000997.1 Genbank gene 199 645 . + . ID=gene-C9F09_16650;Name=C9F09_16650;end_range=645,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16650;partial=true PYKB01000997.1 Protein Homology CDS 199 645 . + 0 ID=cds-TGC88230.1;Parent=gene-C9F09_16650;Dbxref=NCBI_GP:TGC88230.1;Name=TGC88230.1;end_range=645,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=C9F09_16650;partial=true;product=ABC transporter permease;protein_id=TGC88230.1;transl_table=11 ##sequence-region PYKB01001628.1 1 705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001628.1 Genbank region 1 705 . + . ID=PYKB01001628.1:1..705;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001628.1 Genbank pseudogene 1 705 . - . ID=gene-C9F09_28475;Name=C9F09_28475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28475;pseudo=true PYKB01001628.1 Protein Homology CDS 1 705 . - 1 ID=cds-C9F09_28475;Parent=gene-C9F09_28475;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456804.1;locus_tag=C9F09_28475;product=periplasmic nitrate reductase subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKB01001313.1 1 704 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001313.1 Genbank region 1 704 . + . ID=PYKB01001313.1:1..704;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001313.1 Genbank gene 1 459 . - . ID=gene-C9F09_22565;Name=C9F09_22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22565;partial=true;start_range=.,1 PYKB01001313.1 Protein Homology CDS 1 459 . - 0 ID=cds-TGC81290.1;Parent=gene-C9F09_22565;Dbxref=NCBI_GP:TGC81290.1;Name=TGC81290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=C9F09_22565;partial=true;product=Nif3-like dinuclear metal center hexameric protein;protein_id=TGC81290.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000970.1 1 703 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000970.1 Genbank region 1 703 . + . ID=PYKB01000970.1:1..703;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000970.1 Genbank gene 1 264 . - . ID=gene-C9F09_16055;Name=C9F09_16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16055;partial=true;start_range=.,1 PYKB01000970.1 Protein Homology CDS 1 264 . - 0 ID=cds-TGC88879.1;Parent=gene-C9F09_16055;Dbxref=NCBI_GP:TGC88879.1;Name=TGC88879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264185.1;locus_tag=C9F09_16055;partial=true;product=hypothetical protein;protein_id=TGC88879.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001092.1 1 7198 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001092.1 Genbank region 1 7198 . + . ID=PYKB01001092.1:1..7198;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001092.1 Genbank pseudogene 31 318 . + . ID=gene-C9F09_18265;Name=C9F09_18265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18265;pseudo=true PYKB01001092.1 Protein Homology CDS 31 318 . + 0 ID=cds-C9F09_18265;Parent=gene-C9F09_18265;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=C9F09_18265;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001092.1 Genbank gene 280 690 . - . ID=gene-C9F09_18270;Name=C9F09_18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18270 PYKB01001092.1 Protein Homology CDS 280 690 . - 0 ID=cds-TGC86208.1;Parent=gene-C9F09_18270;Dbxref=NCBI_GP:TGC86208.1;Name=TGC86208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455352.1;locus_tag=C9F09_18270;product=hypothetical protein;protein_id=TGC86208.1;transl_table=11 PYKB01001092.1 Genbank gene 823 1581 . + . ID=gene-C9F09_18275;Name=C9F09_18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18275 PYKB01001092.1 Protein Homology CDS 823 1581 . + 0 ID=cds-TGC86209.1;Parent=gene-C9F09_18275;Dbxref=NCBI_GP:TGC86209.1;Name=TGC86209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=C9F09_18275;product=EEP domain-containing protein;protein_id=TGC86209.1;transl_table=11 PYKB01001092.1 Genbank gene 1578 2819 . + . ID=gene-C9F09_18280;Name=C9F09_18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18280 PYKB01001092.1 Protein Homology CDS 1578 2819 . + 0 ID=cds-TGC86210.1;Parent=gene-C9F09_18280;Dbxref=NCBI_GP:TGC86210.1;Name=TGC86210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455350.1;locus_tag=C9F09_18280;product=cardiolipin synthase ClsB;protein_id=TGC86210.1;transl_table=11 PYKB01001092.1 Genbank gene 2819 3781 . + . ID=gene-C9F09_18285;Name=C9F09_18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18285 PYKB01001092.1 Protein Homology CDS 2819 3781 . + 0 ID=cds-TGC86211.1;Parent=gene-C9F09_18285;Dbxref=NCBI_GP:TGC86211.1;Name=TGC86211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455349.1;locus_tag=C9F09_18285;product=UPF0104 family protein;protein_id=TGC86211.1;transl_table=11 PYKB01001092.1 Genbank gene 3784 4344 . - . ID=gene-C9F09_18290;Name=C9F09_18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18290 PYKB01001092.1 Protein Homology CDS 3784 4344 . - 0 ID=cds-TGC86212.1;Parent=gene-C9F09_18290;Dbxref=NCBI_GP:TGC86212.1;Name=TGC86212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=C9F09_18290;product=hypothetical protein;protein_id=TGC86212.1;transl_table=11 PYKB01001092.1 Genbank gene 4352 4960 . - . ID=gene-C9F09_18295;Name=C9F09_18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18295 PYKB01001092.1 Protein Homology CDS 4352 4960 . - 0 ID=cds-TGC86213.1;Parent=gene-C9F09_18295;Dbxref=NCBI_GP:TGC86213.1;Name=TGC86213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=C9F09_18295;product=hypothetical protein;protein_id=TGC86213.1;transl_table=11 PYKB01001092.1 Genbank gene 4984 5691 . - . ID=gene-C9F09_18300;Name=C9F09_18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18300 PYKB01001092.1 Protein Homology CDS 4984 5691 . - 0 ID=cds-TGC86214.1;Parent=gene-C9F09_18300;Dbxref=NCBI_GP:TGC86214.1;Name=TGC86214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455348.1;locus_tag=C9F09_18300;product=hypothetical protein;protein_id=TGC86214.1;transl_table=11 PYKB01001092.1 Genbank pseudogene 5652 5835 . + . ID=gene-C9F09_18305;Name=C9F09_18305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18305;pseudo=true PYKB01001092.1 Protein Homology CDS 5652 5835 . + 0 ID=cds-C9F09_18305;Parent=gene-C9F09_18305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682289.1;locus_tag=C9F09_18305;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001092.1 Genbank gene 5836 6540 . - . ID=gene-C9F09_18310;Name=C9F09_18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18310 PYKB01001092.1 Protein Homology CDS 5836 6540 . - 0 ID=cds-TGC86215.1;Parent=gene-C9F09_18310;Dbxref=NCBI_GP:TGC86215.1;Name=TGC86215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000373608.1;locus_tag=C9F09_18310;product=BAX inhibitor (BI)-1/YccA family protein;protein_id=TGC86215.1;transl_table=11 PYKB01001092.1 Genbank gene 6588 7040 . - . ID=gene-C9F09_18315;Name=C9F09_18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18315 PYKB01001092.1 Protein Homology CDS 6588 7040 . - 0 ID=cds-TGC86216.1;Parent=gene-C9F09_18315;Dbxref=NCBI_GP:TGC86216.1;Name=TGC86216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455347.1;locus_tag=C9F09_18315;product=molybdopterin synthase catalytic subunit MoaE;protein_id=TGC86216.1;transl_table=11 PYKB01001092.1 Genbank gene 7042 7198 . - . ID=gene-C9F09_18320;Name=moaD;end_range=7198,.;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=C9F09_18320;partial=true PYKB01001092.1 Protein Homology CDS 7042 7198 . - 1 ID=cds-TGC86217.1;Parent=gene-C9F09_18320;Dbxref=NCBI_GP:TGC86217.1;Name=TGC86217.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;end_range=7198,.;gbkey=CDS;gene=moaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455346.3;locus_tag=C9F09_18320;partial=true;product=molybdopterin synthase sulfur carrier subunit;protein_id=TGC86217.1;transl_table=11 ##sequence-region PYKB01000137.1 1 702 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000137.1 Genbank region 1 702 . + . ID=PYKB01000137.1:1..702;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000137.1 Genbank gene 1 702 . - . ID=gene-C9F09_01560;Name=C9F09_01560;end_range=702,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01560;partial=true;start_range=.,1 PYKB01000137.1 Protein Homology CDS 1 702 . - 2 ID=cds-TGD04668.1;Parent=gene-C9F09_01560;Dbxref=NCBI_GP:TGD04668.1;Name=TGD04668.1;Note=catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine;end_range=702,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458281.1;locus_tag=C9F09_01560;partial=true;product=trimethylamine-N-oxide reductase TorA;protein_id=TGD04668.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001255.1 1 701 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001255.1 Genbank region 1 701 . + . ID=PYKB01001255.1:1..701;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001255.1 Genbank gene 111 701 . - . ID=gene-C9F09_21455;Name=C9F09_21455;end_range=701,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21455;partial=true PYKB01001255.1 Protein Homology CDS 111 701 . - 0 ID=cds-TGC82317.1;Parent=gene-C9F09_21455;Dbxref=NCBI_GP:TGC82317.1;Name=TGC82317.1;end_range=701,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=C9F09_21455;partial=true;product=peptide ABC transporter ATP-binding protein;protein_id=TGC82317.1;transl_table=11 ##sequence-region PYKB01000174.1 1 701 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000174.1 Genbank region 1 701 . + . ID=PYKB01000174.1:1..701;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000174.1 Genbank pseudogene 1 701 . - . ID=gene-C9F09_01965;Name=C9F09_01965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01965;pseudo=true PYKB01000174.1 Protein Homology CDS 1 701 . - 1 ID=cds-C9F09_01965;Parent=gene-C9F09_01965;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane%3B frameshifted%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455711.1;locus_tag=C9F09_01965;product=lipoprotein-releasing system transmembrane subunit LolE;pseudo=true;transl_table=11 ##sequence-region PYKB01000849.1 1 697 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000849.1 Genbank region 1 697 . + . ID=PYKB01000849.1:1..697;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000849.1 Genbank gene 1 196 . + . ID=gene-C9F09_13535;Name=C9F09_13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13535;partial=true;start_range=.,1 PYKB01000849.1 Protein Homology CDS 1 196 . + 1 ID=cds-TGC91273.1;Parent=gene-C9F09_13535;Dbxref=NCBI_GP:TGC91273.1;Name=TGC91273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=C9F09_13535;partial=true;product=hypothetical protein;protein_id=TGC91273.1;start_range=.,1;transl_table=11 PYKB01000849.1 Genbank gene 279 697 . - . ID=gene-C9F09_13540;Name=C9F09_13540;end_range=697,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13540;partial=true PYKB01000849.1 Protein Homology CDS 279 697 . - 2 ID=cds-TGC91274.1;Parent=gene-C9F09_13540;Dbxref=NCBI_GP:TGC91274.1;Name=TGC91274.1;end_range=697,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=C9F09_13540;partial=true;product=MFS transporter;protein_id=TGC91274.1;transl_table=11 ##sequence-region PYKB01001418.1 1 696 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001418.1 Genbank region 1 696 . + . ID=PYKB01001418.1:1..696;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001418.1 Genbank gene 149 370 . + . ID=gene-C9F09_24395;Name=C9F09_24395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24395 PYKB01001418.1 Protein Homology CDS 149 370 . + 0 ID=cds-TGC79071.1;Parent=gene-C9F09_24395;Dbxref=NCBI_GP:TGC79071.1;Name=TGC79071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458431.1;locus_tag=C9F09_24395;product=DUF2559 domain-containing protein;protein_id=TGC79071.1;transl_table=11 PYKB01001418.1 Genbank gene 363 696 . + . ID=gene-C9F09_24400;Name=C9F09_24400;end_range=696,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24400;partial=true PYKB01001418.1 Protein Homology CDS 363 696 . + 0 ID=cds-TGC79070.1;Parent=gene-C9F09_24400;Dbxref=NCBI_GP:TGC79070.1;Name=TGC79070.1;end_range=696,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PRK10347.1;locus_tag=C9F09_24400;partial=true;product=cell filamentation protein Fic;protein_id=TGC79070.1;transl_table=11 ##sequence-region PYKB01000225.1 1 683 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000225.1 Genbank region 1 683 . + . ID=PYKB01000225.1:1..683;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000225.1 Genbank gene 1 126 . - . ID=gene-C9F09_02440;Name=C9F09_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02440;partial=true;start_range=.,1 PYKB01000225.1 Protein Homology CDS 1 126 . - 0 ID=cds-TGD03180.1;Parent=gene-C9F09_02440;Dbxref=NCBI_GP:TGD03180.1;Name=TGD03180.1;Note=membrane protein AaeX%3B the gene is a member of the aaeXAB operon;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=C9F09_02440;partial=true;product=transporter;protein_id=TGD03180.1;start_range=.,1;transl_table=11 PYKB01000225.1 Genbank gene 308 683 . + . ID=gene-C9F09_02445;Name=C9F09_02445;end_range=683,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02445;partial=true PYKB01000225.1 Protein Homology CDS 308 683 . + 0 ID=cds-TGD03181.1;Parent=gene-C9F09_02445;Dbxref=NCBI_GP:TGD03181.1;Name=TGD03181.1;Note=for aaeXAB operon;end_range=683,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457743.1;locus_tag=C9F09_02445;partial=true;product=transcriptional regulator;protein_id=TGD03181.1;transl_table=11 ##sequence-region PYKB01001287.1 1 682 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001287.1 Genbank region 1 682 . + . ID=PYKB01001287.1:1..682;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001287.1 Genbank pseudogene 1 611 . - . ID=gene-C9F09_22030;Name=C9F09_22030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22030;pseudo=true PYKB01001287.1 Protein Homology CDS 1 611 . - 0 ID=cds-C9F09_22030;Parent=gene-C9F09_22030;Note=with SsaC forms part of a protein export system across the inner and outer cell membranes%3B part of the Salmonella pathogenicity island 2%3B part of the type III secretion system%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456114.1;locus_tag=C9F09_22030;product=EscV/YscV/HrcV family type III secretion system export apparatus protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001293.1 1 679 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001293.1 Genbank region 1 679 . + . ID=PYKB01001293.1:1..679;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001293.1 Genbank gene 1 534 . + . ID=gene-C9F09_22080;Name=C9F09_22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22080;partial=true;start_range=.,1 PYKB01001293.1 Protein Homology CDS 1 534 . + 0 ID=cds-TGC81766.1;Parent=gene-C9F09_22080;Dbxref=NCBI_GP:TGC81766.1;Name=TGC81766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954815.1;locus_tag=C9F09_22080;partial=true;product=acyltransferase;protein_id=TGC81766.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001354.1 1 679 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001354.1 Genbank region 1 679 . + . ID=PYKB01001354.1:1..679;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001354.1 Genbank gene 1 587 . + . ID=gene-C9F09_23290;Name=C9F09_23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23290;partial=true;start_range=.,1 PYKB01001354.1 Protein Homology CDS 1 587 . + 2 ID=cds-TGC80443.1;Parent=gene-C9F09_23290;Dbxref=NCBI_GP:TGC80443.1;Name=TGC80443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454923.1;locus_tag=C9F09_23290;partial=true;product=class II glutamine amidotransferase;protein_id=TGC80443.1;start_range=.,1;transl_table=11 PYKB01001354.1 Genbank gene 558 679 . - . ID=gene-C9F09_23295;Name=C9F09_23295;end_range=679,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23295;partial=true PYKB01001354.1 Protein Homology CDS 558 679 . - 2 ID=cds-TGC80444.1;Parent=gene-C9F09_23295;Dbxref=NCBI_GP:TGC80444.1;Name=TGC80444.1;end_range=679,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454924.1;locus_tag=C9F09_23295;partial=true;product=transpeptidase;protein_id=TGC80444.1;transl_table=11 ##sequence-region PYKB01000389.1 1 676 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000389.1 Genbank region 1 676 . + . ID=PYKB01000389.1:1..676;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000389.1 Genbank gene 1 676 . - . ID=gene-C9F09_04380;Name=C9F09_04380;end_range=676,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04380;partial=true;start_range=.,1 PYKB01000389.1 Protein Homology CDS 1 676 . - 2 ID=cds-TGC99849.1;Parent=gene-C9F09_04380;Dbxref=NCBI_GP:TGC99849.1;Name=TGC99849.1;end_range=676,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=C9F09_04380;partial=true;product=hypothetical protein;protein_id=TGC99849.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000607.1 1 7138 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000607.1 Genbank region 1 7138 . + . ID=PYKB01000607.1:1..7138;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000607.1 Genbank pseudogene 100 324 . - . ID=gene-C9F09_08940;Name=C9F09_08940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08940;pseudo=true PYKB01000607.1 Protein Homology CDS 100 324 . - 0 ID=cds-C9F09_08940;Parent=gene-C9F09_08940;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455611.1;locus_tag=C9F09_08940;product=protein disulfide oxidoreductase;pseudo=true;transl_table=11 PYKB01000607.1 Genbank gene 314 937 . - . ID=gene-C9F09_08945;Name=C9F09_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08945 PYKB01000607.1 Protein Homology CDS 314 937 . - 0 ID=cds-TGC95199.1;Parent=gene-C9F09_08945;Dbxref=NCBI_GP:TGC95199.1;Name=TGC95199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=C9F09_08945;product=disulfide bond formation protein DsbA;protein_id=TGC95199.1;transl_table=11 PYKB01000607.1 Genbank gene 934 2820 . - . ID=gene-C9F09_08950;Name=C9F09_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08950 PYKB01000607.1 Protein Homology CDS 934 2820 . - 0 ID=cds-TGC95200.1;Parent=gene-C9F09_08950;Dbxref=NCBI_GP:TGC95200.1;Name=TGC95200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455609.1;locus_tag=C9F09_08950;product=protein-disulfide reductase;protein_id=TGC95200.1;transl_table=11 PYKB01000607.1 Genbank gene 2869 3231 . - . ID=gene-C9F09_08955;Name=C9F09_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08955 PYKB01000607.1 Protein Homology CDS 2869 3231 . - 0 ID=cds-TGC95201.1;Parent=gene-C9F09_08955;Dbxref=NCBI_GP:TGC95201.1;Name=TGC95201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=C9F09_08955;product=copper resistance protein;protein_id=TGC95201.1;transl_table=11 PYKB01000607.1 Genbank gene 3152 3346 . + . ID=gene-C9F09_08960;Name=C9F09_08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08960 PYKB01000607.1 Protein Homology CDS 3152 3346 . + 0 ID=cds-TGC95207.1;Parent=gene-C9F09_08960;Dbxref=NCBI_GP:TGC95207.1;Name=TGC95207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218966.1;locus_tag=C9F09_08960;product=hypothetical protein;protein_id=TGC95207.1;transl_table=11 PYKB01000607.1 Genbank gene 3467 4387 . + . ID=gene-C9F09_08965;Name=C9F09_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08965 PYKB01000607.1 Protein Homology CDS 3467 4387 . + 0 ID=cds-TGC95202.1;Parent=gene-C9F09_08965;Dbxref=NCBI_GP:TGC95202.1;Name=TGC95202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455607.1;locus_tag=C9F09_08965;product=curved DNA-binding protein;protein_id=TGC95202.1;transl_table=11 PYKB01000607.1 Genbank gene 4387 4692 . + . ID=gene-C9F09_08970;Name=C9F09_08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08970 PYKB01000607.1 Protein Homology CDS 4387 4692 . + 0 ID=cds-TGC95203.1;Parent=gene-C9F09_08970;Dbxref=NCBI_GP:TGC95203.1;Name=TGC95203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455606.1;locus_tag=C9F09_08970;product=chaperone modulator CbpM;protein_id=TGC95203.1;transl_table=11 PYKB01000607.1 Genbank gene 4743 4898 . - . ID=gene-C9F09_08975;Name=C9F09_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08975 PYKB01000607.1 Protein Homology CDS 4743 4898 . - 0 ID=cds-TGC95204.1;Parent=gene-C9F09_08975;Dbxref=NCBI_GP:TGC95204.1;Name=TGC95204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991979.1;locus_tag=C9F09_08975;product=hypothetical protein;protein_id=TGC95204.1;transl_table=11 PYKB01000607.1 Genbank gene 5346 5708 . + . ID=gene-C9F09_08980;Name=C9F09_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08980 PYKB01000607.1 Protein Homology CDS 5346 5708 . + 0 ID=cds-TGC95205.1;Parent=gene-C9F09_08980;Dbxref=NCBI_GP:TGC95205.1;Name=TGC95205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=C9F09_08980;product=anti-adapter protein IraM;protein_id=TGC95205.1;transl_table=11 PYKB01000607.1 Genbank gene 6116 7054 . - . ID=gene-C9F09_08985;Name=C9F09_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08985 PYKB01000607.1 Protein Homology CDS 6116 7054 . - 0 ID=cds-TGC95206.1;Parent=gene-C9F09_08985;Dbxref=NCBI_GP:TGC95206.1;Name=TGC95206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455605.1;locus_tag=C9F09_08985;product=MBL fold metallo-hydrolase;protein_id=TGC95206.1;transl_table=11 ##sequence-region PYKB01000124.1 1 676 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000124.1 Genbank region 1 676 . + . ID=PYKB01000124.1:1..676;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000124.1 Genbank gene 1 299 . - . ID=gene-C9F09_01435;Name=C9F09_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01435;partial=true;start_range=.,1 PYKB01000124.1 Protein Homology CDS 1 299 . - 0 ID=cds-TGD05000.1;Parent=gene-C9F09_01435;Dbxref=NCBI_GP:TGD05000.1;Name=TGD05000.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457021.1;locus_tag=C9F09_01435;partial=true;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=TGD05000.1;start_range=.,1;transl_table=11 PYKB01000124.1 Genbank gene 474 676 . - . ID=gene-C9F09_01440;Name=C9F09_01440;end_range=676,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01440;partial=true PYKB01000124.1 Protein Homology CDS 474 676 . - 2 ID=cds-TGD05001.1;Parent=gene-C9F09_01440;Dbxref=NCBI_GP:TGD05001.1;Name=TGD05001.1;end_range=676,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457022.1;locus_tag=C9F09_01440;partial=true;product=outer membrane protein assembly factor BamC;protein_id=TGD05001.1;transl_table=11 ##sequence-region PYKB01001622.1 1 675 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001622.1 Genbank region 1 675 . + . ID=PYKB01001622.1:1..675;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001622.1 Genbank gene 1 675 . + . ID=gene-C9F09_28415;Name=C9F09_28415;end_range=675,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28415;partial=true;start_range=.,1 PYKB01001622.1 Protein Homology CDS 1 675 . + 0 ID=cds-TGC74329.1;Parent=gene-C9F09_28415;Dbxref=NCBI_GP:TGC74329.1;Name=TGC74329.1;end_range=675,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131976.1;locus_tag=C9F09_28415;partial=true;product=flagellar biosynthesis protein FlhA;protein_id=TGC74329.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000363.1 1 675 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000363.1 Genbank region 1 675 . + . ID=PYKB01000363.1:1..675;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000363.1 Genbank gene 1 416 . - . ID=gene-C9F09_04110;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=C9F09_04110;partial=true;start_range=.,1 PYKB01000363.1 Protein Homology CDS 1 416 . - 0 ID=cds-TGD00236.1;Parent=gene-C9F09_04110;Dbxref=NCBI_GP:TGD00236.1;Name=TGD00236.1;Note=FadI%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadJ%3B similar to FadA2B2 complex%3B functions in beta-oxidation of fatty acids during anaerobic growth;gbkey=CDS;gene=fadI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456930.1;locus_tag=C9F09_04110;partial=true;product=acetyl-CoA C-acyltransferase FadI;protein_id=TGD00236.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000386.1 1 672 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000386.1 Genbank region 1 672 . + . ID=PYKB01000386.1:1..672;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000386.1 Genbank gene 1 672 . + . ID=gene-C9F09_04355;Name=C9F09_04355;end_range=672,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04355;partial=true;start_range=.,1 PYKB01000386.1 Protein Homology CDS 1 672 . + 0 ID=cds-TGC99902.1;Parent=gene-C9F09_04355;Dbxref=NCBI_GP:TGC99902.1;Name=TGC99902.1;end_range=672,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458832.1;locus_tag=C9F09_04355;partial=true;product=hypothetical protein;protein_id=TGC99902.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001062.1 1 672 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001062.1 Genbank region 1 672 . + . ID=PYKB01001062.1:1..672;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001062.1 Genbank pseudogene 1 637 . - . ID=gene-C9F09_17790;Name=C9F09_17790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17790;pseudo=true PYKB01001062.1 Protein Homology CDS 1 637 . - 0 ID=cds-C9F09_17790;Parent=gene-C9F09_17790;Note=Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=C9F09_17790;product=TMAO reductase two-component system sensor histidine kinase TorS;pseudo=true;transl_table=11 ##sequence-region PYKB01000944.1 1 668 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000944.1 Genbank region 1 668 . + . ID=PYKB01000944.1:1..668;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000944.1 Genbank gene 1 296 . - . ID=gene-C9F09_15590;Name=C9F09_15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15590;partial=true;start_range=.,1 PYKB01000944.1 Protein Homology CDS 1 296 . - 0 ID=cds-TGC89443.1;Parent=gene-C9F09_15590;Dbxref=NCBI_GP:TGC89443.1;Name=TGC89443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455376.1;locus_tag=C9F09_15590;partial=true;product=sugar-phosphatase;protein_id=TGC89443.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000123.1 1 665 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000123.1 Genbank region 1 665 . + . ID=PYKB01000123.1:1..665;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000123.1 Genbank gene 1 665 . - . ID=gene-C9F09_01430;Name=C9F09_01430;end_range=665,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01430;partial=true;start_range=.,1 PYKB01000123.1 Protein Homology CDS 1 665 . - 0 ID=cds-TGD05022.1;Parent=gene-C9F09_01430;Dbxref=NCBI_GP:TGD05022.1;Name=TGD05022.1;end_range=665,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=C9F09_01430;partial=true;product=putrescine ABC transporter permease PotI;protein_id=TGD05022.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000338.1 1 664 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000338.1 Genbank region 1 664 . + . ID=PYKB01000338.1:1..664;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000338.1 Genbank pseudogene 1 664 . - . ID=gene-C9F09_03760;Name=C9F09_03760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03760;pseudo=true PYKB01000338.1 Protein Homology CDS 1 664 . - 0 ID=cds-C9F09_03760;Parent=gene-C9F09_03760;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457063.1;locus_tag=C9F09_03760;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000667.1 1 663 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000667.1 Genbank region 1 663 . + . ID=PYKB01000667.1:1..663;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000667.1 Genbank gene 1 213 . + . ID=gene-C9F09_10020;Name=C9F09_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10020;partial=true;start_range=.,1 PYKB01000667.1 Protein Homology CDS 1 213 . + 0 ID=cds-TGC94086.1;Parent=gene-C9F09_10020;Dbxref=NCBI_GP:TGC94086.1;Name=TGC94086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=C9F09_10020;partial=true;product=GNAT family N-acetyltransferase;protein_id=TGC94086.1;start_range=.,1;transl_table=11 PYKB01000667.1 Genbank pseudogene 428 663 . + . ID=gene-C9F09_10025;Name=C9F09_10025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10025;pseudo=true PYKB01000667.1 Protein Homology CDS 428 663 . + 0 ID=cds-C9F09_10025;Parent=gene-C9F09_10025;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=C9F09_10025;product=IS481 family transposase;pseudo=true;transl_table=11 ##sequence-region PYKB01000020.1 1 662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000020.1 Genbank region 1 662 . + . ID=PYKB01000020.1:1..662;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000020.1 Genbank gene 1 549 . - . ID=gene-C9F09_00225;Name=C9F09_00225;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F09_00225;partial=true;start_range=.,1 PYKB01000020.1 Genbank rRNA 1 549 . - . ID=rna-C9F09_00225;Parent=gene-C9F09_00225;gbkey=rRNA;locus_tag=C9F09_00225;partial=true;product=23S ribosomal RNA;start_range=.,1 PYKB01000020.1 Genbank exon 1 549 . - . ID=exon-C9F09_00225-1;Parent=rna-C9F09_00225;gbkey=rRNA;locus_tag=C9F09_00225;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region PYKB01001544.1 1 7128 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001544.1 Genbank region 1 7128 . + . ID=PYKB01001544.1:1..7128;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001544.1 Genbank pseudogene 60 584 . + . ID=gene-C9F09_26890;Name=C9F09_26890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_26890;pseudo=true PYKB01001544.1 Protein Homology CDS 60 584 . + 0 ID=cds-C9F09_26890;Parent=gene-C9F09_26890;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=C9F09_26890;product=DNA-binding transcriptional regulator;pseudo=true;transl_table=11 PYKB01001544.1 Genbank pseudogene 668 993 . - . ID=gene-C9F09_26895;Name=C9F09_26895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_26895;pseudo=true PYKB01001544.1 Protein Homology CDS 668 993 . - 0 ID=cds-C9F09_26895;Parent=gene-C9F09_26895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457201.1;locus_tag=C9F09_26895;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001544.1 Genbank gene 1155 1505 . + . ID=gene-C9F09_26900;Name=C9F09_26900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26900 PYKB01001544.1 Protein Homology CDS 1155 1505 . + 0 ID=cds-TGC76175.1;Parent=gene-C9F09_26900;Dbxref=NCBI_GP:TGC76175.1;Name=TGC76175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=C9F09_26900;product=hypothetical protein;protein_id=TGC76175.1;transl_table=11 PYKB01001544.1 Genbank gene 1540 1989 . - . ID=gene-C9F09_26905;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=C9F09_26905 PYKB01001544.1 Protein Homology CDS 1540 1989 . - 0 ID=cds-TGC76176.1;Parent=gene-C9F09_26905;Dbxref=NCBI_GP:TGC76176.1;Name=TGC76176.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=C9F09_26905;product=L-alanine exporter AlaE;protein_id=TGC76176.1;transl_table=11 PYKB01001544.1 Genbank gene 2015 2194 . - . ID=gene-C9F09_26910;Name=C9F09_26910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26910 PYKB01001544.1 Protein Homology CDS 2015 2194 . - 0 ID=cds-TGC76184.1;Parent=gene-C9F09_26910;Dbxref=NCBI_GP:TGC76184.1;Name=TGC76184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662860.1;locus_tag=C9F09_26910;product=hypothetical protein;protein_id=TGC76184.1;transl_table=11 PYKB01001544.1 Genbank gene 2688 3089 . + . ID=gene-C9F09_26915;Name=C9F09_26915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26915 PYKB01001544.1 Protein Homology CDS 2688 3089 . + 0 ID=cds-TGC76177.1;Parent=gene-C9F09_26915;Dbxref=NCBI_GP:TGC76177.1;Name=TGC76177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457198.1;locus_tag=C9F09_26915;product=DNA-binding protein StpA;protein_id=TGC76177.1;transl_table=11 PYKB01001544.1 Genbank gene 3179 3358 . - . ID=gene-C9F09_26920;Name=C9F09_26920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26920 PYKB01001544.1 Protein Homology CDS 3179 3358 . - 0 ID=cds-TGC76178.1;Parent=gene-C9F09_26920;Dbxref=NCBI_GP:TGC76178.1;Name=TGC76178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016154141.1;locus_tag=C9F09_26920;product=hypothetical protein;protein_id=TGC76178.1;transl_table=11 PYKB01001544.1 Genbank gene 3437 3964 . - . ID=gene-C9F09_26925;Name=C9F09_26925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26925 PYKB01001544.1 Protein Homology CDS 3437 3964 . - 0 ID=cds-TGC76179.1;Parent=gene-C9F09_26925;Dbxref=NCBI_GP:TGC76179.1;Name=TGC76179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457196.1;locus_tag=C9F09_26925;product=DUF2892 domain-containing protein;protein_id=TGC76179.1;transl_table=11 PYKB01001544.1 Genbank gene 3974 4273 . - . ID=gene-C9F09_26930;Name=C9F09_26930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26930 PYKB01001544.1 Protein Homology CDS 3974 4273 . - 0 ID=cds-TGC76180.1;Parent=gene-C9F09_26930;Dbxref=NCBI_GP:TGC76180.1;Name=TGC76180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=C9F09_26930;product=transcriptional regulator;protein_id=TGC76180.1;transl_table=11 PYKB01001544.1 Genbank gene 4456 4614 . + . ID=gene-C9F09_26935;Name=C9F09_26935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26935 PYKB01001544.1 Protein Homology CDS 4456 4614 . + 0 ID=cds-TGC76181.1;Parent=gene-C9F09_26935;Dbxref=NCBI_GP:TGC76181.1;Name=TGC76181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457194.1;locus_tag=C9F09_26935;product=YqaE/Pmp3 family membrane protein;protein_id=TGC76181.1;transl_table=11 PYKB01001544.1 Genbank pseudogene 4647 4748 . + . ID=gene-C9F09_26940;Name=C9F09_26940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_26940;pseudo=true PYKB01001544.1 Protein Homology CDS 4647 4748 . + 0 ID=cds-C9F09_26940;Parent=gene-C9F09_26940;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001640746.1;locus_tag=C9F09_26940;product=uridine kinase;pseudo=true;transl_table=11 PYKB01001544.1 Genbank gene 4714 5163 . + . ID=gene-C9F09_26945;Name=C9F09_26945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26945 PYKB01001544.1 Protein Homology CDS 4714 5163 . + 0 ID=cds-TGC76182.1;Parent=gene-C9F09_26945;Dbxref=NCBI_GP:TGC76182.1;Name=TGC76182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=C9F09_26945;product=peptidoglycan-binding protein LysM;protein_id=TGC76182.1;transl_table=11 PYKB01001544.1 Genbank gene 5185 5862 . - . ID=gene-C9F09_26950;Name=C9F09_26950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26950 PYKB01001544.1 Protein Homology CDS 5185 5862 . - 0 ID=cds-TGC76183.1;Parent=gene-C9F09_26950;Dbxref=NCBI_GP:TGC76183.1;Name=TGC76183.1;Note=regulator of gab gene expression;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457193.1;locus_tag=C9F09_26950;product=transcriptional regulator;protein_id=TGC76183.1;transl_table=11 PYKB01001544.1 Genbank pseudogene 5904 7059 . - . ID=gene-C9F09_26955;Name=C9F09_26955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_26955;pseudo=true PYKB01001544.1 Protein Homology CDS 5904 7059 . - 0 ID=cds-C9F09_26955;Parent=gene-C9F09_26955;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=C9F09_26955;product=GABA permease;pseudo=true;transl_table=11 ##sequence-region PYKB01000535.1 1 662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000535.1 Genbank region 1 662 . + . ID=PYKB01000535.1:1..662;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000535.1 Genbank pseudogene 16 662 . + . ID=gene-C9F09_07285;Name=C9F09_07285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07285;pseudo=true PYKB01000535.1 Protein Homology CDS 16 662 . + 0 ID=cds-C9F09_07285;Parent=gene-C9F09_07285;Note=part of the microcin C transport system%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456775.1;locus_tag=C9F09_07285;product=microcin ABC transporter permease;pseudo=true;transl_table=11 ##sequence-region PYKB01000918.1 1 661 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000918.1 Genbank region 1 661 . + . ID=PYKB01000918.1:1..661;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000918.1 Genbank gene 1 388 . - . ID=gene-C9F09_15100;Name=C9F09_15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15100;partial=true;start_range=.,1 PYKB01000918.1 Protein Homology CDS 1 388 . - 0 ID=cds-TGC89852.1;Parent=gene-C9F09_15100;Dbxref=NCBI_GP:TGC89852.1;Name=TGC89852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=C9F09_15100;partial=true;product=hypothetical protein;protein_id=TGC89852.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000422.1 1 572 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000422.1 Genbank region 1 572 . + . ID=PYKB01000422.1:1..572;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000422.1 Genbank gene 1 572 . - . ID=gene-C9F09_04875;Name=C9F09_04875;end_range=572,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04875;partial=true;start_range=.,1 PYKB01000422.1 Protein Homology CDS 1 572 . - 2 ID=cds-TGC99207.1;Parent=gene-C9F09_04875;Dbxref=NCBI_GP:TGC99207.1;Name=TGC99207.1;end_range=572,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=C9F09_04875;partial=true;product=LysR family transcriptional regulator;protein_id=TGC99207.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000779.1 1 656 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000779.1 Genbank region 1 656 . + . ID=PYKB01000779.1:1..656;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000779.1 Genbank gene 1 656 . - . ID=gene-C9F09_12060;Name=C9F09_12060;end_range=656,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12060;partial=true;start_range=.,1 PYKB01000779.1 Protein Homology CDS 1 656 . - 1 ID=cds-TGC92508.1;Parent=gene-C9F09_12060;Dbxref=NCBI_GP:TGC92508.1;Name=TGC92508.1;end_range=656,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=C9F09_12060;partial=true;product=chromosome partition protein MukF;protein_id=TGC92508.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000325.1 1 656 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000325.1 Genbank region 1 656 . + . ID=PYKB01000325.1:1..656;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000325.1 Genbank pseudogene 1 589 . - . ID=gene-C9F09_03625;Name=C9F09_03625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03625;pseudo=true PYKB01000325.1 Protein Homology CDS 1 589 . - 0 ID=cds-C9F09_03625;Parent=gene-C9F09_03625;Note=involved in the transport of aldohexuronates%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457529.1;locus_tag=C9F09_03625;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKB01000388.1 1 655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000388.1 Genbank region 1 655 . + . ID=PYKB01000388.1:1..655;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000388.1 Genbank pseudogene 1 415 . + . ID=gene-C9F09_04375;Name=C9F09_04375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04375;pseudo=true PYKB01000388.1 Protein Homology CDS 1 415 . + 1 ID=cds-C9F09_04375;Parent=gene-C9F09_04375;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=C9F09_04375;product=fimbrial protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000347.1 1 654 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000347.1 Genbank region 1 654 . + . ID=PYKB01000347.1:1..654;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000347.1 Genbank gene 1 294 . + . ID=gene-C9F09_03900;Name=C9F09_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03900;partial=true;start_range=.,1 PYKB01000347.1 Protein Homology CDS 1 294 . + 0 ID=cds-TGD00590.1;Parent=gene-C9F09_03900;Dbxref=NCBI_GP:TGD00590.1;Name=TGD00590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=C9F09_03900;partial=true;product=hypothetical protein;protein_id=TGD00590.1;start_range=.,1;transl_table=11 PYKB01000347.1 Genbank gene 287 654 . + . ID=gene-C9F09_03905;Name=C9F09_03905;end_range=654,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03905;partial=true PYKB01000347.1 Protein Homology CDS 287 654 . + 0 ID=cds-TGD00591.1;Parent=gene-C9F09_03905;Dbxref=NCBI_GP:TGD00591.1;Name=TGD00591.1;Note=with ProVX is involved in the high-affinity uptake of glycine betaine;end_range=654,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457208.1;locus_tag=C9F09_03905;partial=true;product=proline/betaine ABC transporter permease ProW;protein_id=TGD00591.1;transl_table=11 ##sequence-region PYKB01001362.1 1 645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001362.1 Genbank region 1 645 . + . ID=PYKB01001362.1:1..645;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001362.1 Genbank gene 1 549 . - . ID=gene-C9F09_23380;Name=C9F09_23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23380;partial=true;start_range=.,1 PYKB01001362.1 Protein Homology CDS 1 549 . - 0 ID=cds-TGC80299.1;Parent=gene-C9F09_23380;Dbxref=NCBI_GP:TGC80299.1;Name=TGC80299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457741.1;locus_tag=C9F09_23380;partial=true;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=TGC80299.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000627.1 1 607 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000627.1 Genbank region 1 607 . + . ID=PYKB01000627.1:1..607;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000627.1 Genbank pseudogene 31 357 . + . ID=gene-C9F09_09305;Name=C9F09_09305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_09305;pseudo=true PYKB01000627.1 Protein Homology CDS 31 357 . + 0 ID=cds-C9F09_09305;Parent=gene-C9F09_09305;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=C9F09_09305;product=DUF2593 domain-containing protein;pseudo=true;transl_table=11 PYKB01000627.1 Genbank gene 400 607 . + . ID=gene-C9F09_09310;Name=rumB;end_range=607,.;gbkey=Gene;gene=rumB;gene_biotype=protein_coding;locus_tag=C9F09_09310;partial=true PYKB01000627.1 Protein Homology CDS 400 607 . + 0 ID=cds-TGC94799.1;Parent=gene-C9F09_09310;Dbxref=NCBI_GP:TGC94799.1;Name=TGC94799.1;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;end_range=607,.;gbkey=CDS;gene=rumB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459859.1;locus_tag=C9F09_09310;partial=true;product=23S rRNA (uracil(747)-C(5))-methyltransferase;protein_id=TGC94799.1;transl_table=11 ##sequence-region PYKB01000305.1 1 641 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000305.1 Genbank region 1 641 . + . ID=PYKB01000305.1:1..641;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000305.1 Genbank gene 21 641 . - . ID=gene-C9F09_03435;Name=C9F09_03435;end_range=641,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03435;partial=true PYKB01000305.1 Protein Homology CDS 21 641 . - 0 ID=cds-TGD01419.1;Parent=gene-C9F09_03435;Dbxref=NCBI_GP:TGD01419.1;Name=TGD01419.1;end_range=641,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456769.1;locus_tag=C9F09_03435;partial=true;product=hypothetical protein;protein_id=TGD01419.1;transl_table=11 ##sequence-region PYKB01001314.1 1 7115 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001314.1 Genbank region 1 7115 . + . ID=PYKB01001314.1:1..7115;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001314.1 Genbank gene 1 706 . - . ID=gene-C9F09_22570;Name=C9F09_22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22570;partial=true;start_range=.,1 PYKB01001314.1 Protein Homology CDS 1 706 . - 0 ID=cds-TGC81278.1;Parent=gene-C9F09_22570;Dbxref=NCBI_GP:TGC81278.1;Name=TGC81278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455216.1;locus_tag=C9F09_22570;partial=true;product=penicillin-binding protein 2;protein_id=TGC81278.1;start_range=.,1;transl_table=11 PYKB01001314.1 Genbank gene 737 1204 . - . ID=gene-C9F09_22575;Name=C9F09_22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22575 PYKB01001314.1 Protein Homology CDS 737 1204 . - 0 ID=cds-TGC81279.1;Parent=gene-C9F09_22575;Dbxref=NCBI_GP:TGC81279.1;Name=TGC81279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=C9F09_22575;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=TGC81279.1;transl_table=11 PYKB01001314.1 Genbank gene 1208 1525 . - . ID=gene-C9F09_22580;Name=C9F09_22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22580 PYKB01001314.1 Protein Homology CDS 1208 1525 . - 0 ID=cds-TGC81280.1;Parent=gene-C9F09_22580;Dbxref=NCBI_GP:TGC81280.1;Name=TGC81280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455218.1;locus_tag=C9F09_22580;product=ribosome silencing factor RsfS;protein_id=TGC81280.1;transl_table=11 PYKB01001314.1 Genbank gene 1854 2462 . - . ID=gene-C9F09_22585;Name=C9F09_22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22585 PYKB01001314.1 Protein Homology CDS 1854 2462 . - 0 ID=cds-TGC81284.1;Parent=gene-C9F09_22585;Dbxref=NCBI_GP:TGC81284.1;Name=TGC81284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=C9F09_22585;product=alpha-ribazole phosphatase;protein_id=TGC81284.1;transl_table=11 PYKB01001314.1 Genbank gene 2559 3653 . + . ID=gene-C9F09_22590;Name=C9F09_22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22590 PYKB01001314.1 Protein Homology CDS 2559 3653 . + 0 ID=cds-TGC81281.1;Parent=gene-C9F09_22590;Dbxref=NCBI_GP:TGC81281.1;Name=TGC81281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455220.1;locus_tag=C9F09_22590;product=threonine-phosphate decarboxylase;protein_id=TGC81281.1;transl_table=11 PYKB01001314.1 Genbank gene 3628 4269 . - . ID=gene-C9F09_22595;Name=C9F09_22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22595 PYKB01001314.1 Protein Homology CDS 3628 4269 . - 0 ID=cds-TGC81285.1;Parent=gene-C9F09_22595;Dbxref=NCBI_GP:TGC81285.1;Name=TGC81285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=C9F09_22595;product=nicotinate-nucleotide adenylyltransferase;protein_id=TGC81285.1;transl_table=11 PYKB01001314.1 Genbank gene 4271 5302 . - . ID=gene-C9F09_22600;Name=C9F09_22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22600 PYKB01001314.1 Protein Homology CDS 4271 5302 . - 0 ID=cds-TGC81282.1;Parent=gene-C9F09_22600;Dbxref=NCBI_GP:TGC81282.1;Name=TGC81282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455222.1;locus_tag=C9F09_22600;product=DNA polymerase III subunit delta;protein_id=TGC81282.1;transl_table=11 PYKB01001314.1 Genbank gene 5302 5892 . - . ID=gene-C9F09_22605;Name=C9F09_22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22605 PYKB01001314.1 Protein Homology CDS 5302 5892 . - 0 ID=cds-TGC81283.1;Parent=gene-C9F09_22605;Dbxref=NCBI_GP:TGC81283.1;Name=TGC81283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455223.1;locus_tag=C9F09_22605;product=LPS assembly lipoprotein LptE;protein_id=TGC81283.1;transl_table=11 PYKB01001314.1 Genbank gene 5907 7115 . - . ID=gene-C9F09_22610;Name=leuS;end_range=7115,.;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=C9F09_22610;partial=true PYKB01001314.1 Protein Homology CDS 5907 7115 . - 0 ID=cds-TGC81286.1;Parent=gene-C9F09_22610;Dbxref=NCBI_GP:TGC81286.1;Name=TGC81286.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;end_range=7115,.;gbkey=CDS;gene=leuS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455224.1;locus_tag=C9F09_22610;partial=true;product=leucine--tRNA ligase;protein_id=TGC81286.1;transl_table=11 ##sequence-region PYKB01000698.1 1 641 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000698.1 Genbank region 1 641 . + . ID=PYKB01000698.1:1..641;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000698.1 Genbank gene 70 641 . + . ID=gene-C9F09_10620;Name=C9F09_10620;end_range=641,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10620;partial=true PYKB01000698.1 Protein Homology CDS 70 641 . + 0 ID=cds-TGC93727.1;Parent=gene-C9F09_10620;Dbxref=NCBI_GP:TGC93727.1;Name=TGC93727.1;Note=Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1;end_range=641,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=C9F09_10620;partial=true;product=bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-ACP synthetase;protein_id=TGC93727.1;transl_table=11 ##sequence-region PYKB01001597.1 1 637 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001597.1 Genbank region 1 637 . + . ID=PYKB01001597.1:1..637;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001597.1 Genbank gene 1 257 . - . ID=gene-C9F09_28070;Name=C9F09_28070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28070;partial=true;start_range=.,1 PYKB01001597.1 Protein Homology CDS 1 257 . - 0 ID=cds-TGC74915.1;Parent=gene-C9F09_28070;Dbxref=NCBI_GP:TGC74915.1;Name=TGC74915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=C9F09_28070;partial=true;product=DNA oxidative demethylase AlkB;protein_id=TGC74915.1;start_range=.,1;transl_table=11 PYKB01001597.1 Genbank gene 260 637 . - . ID=gene-C9F09_28075;Name=C9F09_28075;end_range=637,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28075;partial=true PYKB01001597.1 Protein Homology CDS 260 637 . - 0 ID=cds-TGC74916.1;Parent=gene-C9F09_28075;Dbxref=NCBI_GP:TGC74916.1;Name=TGC74916.1;Note=regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine;end_range=637,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456810.1;locus_tag=C9F09_28075;partial=true;product=bifunctional transcriptional activator/DNA repair enzyme protein Ada;protein_id=TGC74916.1;transl_table=11 ##sequence-region PYKB01001120.1 1 636 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001120.1 Genbank region 1 636 . + . ID=PYKB01001120.1:1..636;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001120.1 Genbank gene 1 121 . - . ID=gene-C9F09_18825;Name=C9F09_18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18825;partial=true;start_range=.,1 PYKB01001120.1 Protein Homology CDS 1 121 . - 0 ID=cds-TGC85498.1;Parent=gene-C9F09_18825;Dbxref=NCBI_GP:TGC85498.1;Name=TGC85498.1;Note=is involved with the sodium-dependent uptake of glutamate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458182.1;locus_tag=C9F09_18825;partial=true;product=sodium/glutamate symporter;protein_id=TGC85498.1;start_range=.,1;transl_table=11 PYKB01001120.1 Genbank gene 349 636 . + . ID=gene-C9F09_18830;Name=C9F09_18830;end_range=636,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18830;partial=true PYKB01001120.1 Protein Homology CDS 349 636 . + 0 ID=cds-TGC85499.1;Parent=gene-C9F09_18830;Dbxref=NCBI_GP:TGC85499.1;Name=TGC85499.1;Note=high-affinity transporter for xanthine;end_range=636,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458181.1;locus_tag=C9F09_18830;partial=true;product=xanthine permease XanP;protein_id=TGC85499.1;transl_table=11 ##sequence-region PYKB01001040.1 1 635 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001040.1 Genbank region 1 635 . + . ID=PYKB01001040.1:1..635;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001040.1 Genbank pseudogene 380 598 . + . ID=gene-C9F09_17450;Name=C9F09_17450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17450;pseudo=true PYKB01001040.1 Protein Homology CDS 380 598 . + 0 ID=cds-C9F09_17450;Parent=gene-C9F09_17450;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455367.1;locus_tag=C9F09_17450;product=EamA family transporter;pseudo=true;transl_table=11 ##sequence-region PYKB01000396.1 1 633 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000396.1 Genbank region 1 633 . + . ID=PYKB01000396.1:1..633;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000396.1 Genbank gene 1 633 . - . ID=gene-C9F09_04420;Name=mnmC;end_range=633,.;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;gene_synonym=trmC,yfcK;locus_tag=C9F09_04420;partial=true;start_range=.,1 PYKB01000396.1 Protein Homology CDS 1 633 . - 0 ID=cds-TGC99705.1;Parent=gene-C9F09_04420;Dbxref=NCBI_GP:TGC99705.1;Name=TGC99705.1;Note=5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme;end_range=633,.;gbkey=CDS;gene=mnmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456921.3;locus_tag=C9F09_04420;partial=true;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=TGC99705.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000052.1 1 630 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000052.1 Genbank region 1 630 . + . ID=PYKB01000052.1:1..630;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000052.1 Genbank gene 1 258 . + . ID=gene-C9F09_00575;Name=C9F09_00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00575;partial=true;start_range=.,1 PYKB01000052.1 Protein Homology CDS 1 258 . + 0 ID=cds-TGD06410.1;Parent=gene-C9F09_00575;Dbxref=NCBI_GP:TGD06410.1;Name=TGD06410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=C9F09_00575;partial=true;product=MFS transporter;protein_id=TGD06410.1;start_range=.,1;transl_table=11 PYKB01000052.1 Genbank gene 476 630 . + . ID=gene-C9F09_00580;Name=C9F09_00580;end_range=630,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00580;partial=true PYKB01000052.1 Protein Homology CDS 476 630 . + 0 ID=cds-TGD06411.1;Parent=gene-C9F09_00580;Dbxref=NCBI_GP:TGD06411.1;Name=TGD06411.1;end_range=630,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455457.1;locus_tag=C9F09_00580;partial=true;product=amino acid permease;protein_id=TGD06411.1;transl_table=11 ##sequence-region PYKB01000390.1 1 627 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000390.1 Genbank region 1 627 . + . ID=PYKB01000390.1:1..627;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000390.1 Genbank gene 6 627 . + . ID=gene-C9F09_04385;Name=kbaY;end_range=627,.;gbkey=Gene;gene=kbaY;gene_biotype=protein_coding;gene_synonym=agaY;locus_tag=C9F09_04385;partial=true PYKB01000390.1 Protein Homology CDS 6 627 . + 0 ID=cds-TGC99833.1;Parent=gene-C9F09_04385;Dbxref=NCBI_GP:TGC99833.1;Name=TGC99833.1;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway;end_range=627,.;gbkey=CDS;gene=kbaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457638.1;locus_tag=C9F09_04385;partial=true;product=tagatose-bisphosphate aldolase;protein_id=TGC99833.1;transl_table=11 ##sequence-region PYKB01001162.1 1 625 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001162.1 Genbank region 1 625 . + . ID=PYKB01001162.1:1..625;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001162.1 Genbank gene 1 441 . - . ID=gene-C9F09_19635;Name=C9F09_19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19635;partial=true;start_range=.,1 PYKB01001162.1 Protein Homology CDS 1 441 . - 0 ID=cds-TGC84497.1;Parent=gene-C9F09_19635;Dbxref=NCBI_GP:TGC84497.1;Name=TGC84497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015836041.1;locus_tag=C9F09_19635;partial=true;product=transcriptional regulator;protein_id=TGC84497.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000306.1 1 625 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000306.1 Genbank region 1 625 . + . ID=PYKB01000306.1:1..625;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000306.1 Genbank gene 1 625 . + . ID=gene-C9F09_03440;Name=C9F09_03440;end_range=625,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03440;partial=true;start_range=.,1 PYKB01000306.1 Protein Homology CDS 1 625 . + 0 ID=cds-TGD01417.1;Parent=gene-C9F09_03440;Dbxref=NCBI_GP:TGD01417.1;Name=TGD01417.1;end_range=625,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=C9F09_03440;partial=true;product=flotillin;protein_id=TGD01417.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000828.1 1 625 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000828.1 Genbank region 1 625 . + . ID=PYKB01000828.1:1..625;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000828.1 Genbank gene 1 347 . - . ID=gene-C9F09_13065;Name=C9F09_13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13065;partial=true;start_range=.,1 PYKB01000828.1 Protein Homology CDS 1 347 . - 0 ID=cds-TGC91646.1;Parent=gene-C9F09_13065;Dbxref=NCBI_GP:TGC91646.1;Name=TGC91646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=C9F09_13065;partial=true;product=hypothetical protein;protein_id=TGC91646.1;start_range=.,1;transl_table=11 PYKB01000828.1 Genbank gene 331 625 . - . ID=gene-C9F09_13070;Name=C9F09_13070;end_range=625,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13070;partial=true PYKB01000828.1 Protein Homology CDS 331 625 . - 1 ID=cds-TGC91647.1;Parent=gene-C9F09_13070;Dbxref=NCBI_GP:TGC91647.1;Name=TGC91647.1;end_range=625,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458413.1;locus_tag=C9F09_13070;partial=true;product=hypothetical protein;protein_id=TGC91647.1;transl_table=11 ##sequence-region PYKB01000570.1 1 7071 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000570.1 Genbank region 1 7071 . + . ID=PYKB01000570.1:1..7071;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000570.1 Genbank gene 1 409 . - . ID=gene-C9F09_08030;Name=C9F09_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08030;partial=true;start_range=.,1 PYKB01000570.1 Protein Homology CDS 1 409 . - 0 ID=cds-TGC96035.1;Parent=gene-C9F09_08030;Dbxref=NCBI_GP:TGC96035.1;Name=TGC96035.1;Note=predicted SAM-dependent methyltransferase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458324.1;locus_tag=C9F09_08030;partial=true;product=16S rRNA (guanine(1516)-N(2))-methyltransferase;protein_id=TGC96035.1;start_range=.,1;transl_table=11 PYKB01000570.1 Genbank gene 416 2458 . - . ID=gene-C9F09_08035;Name=C9F09_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08035 PYKB01000570.1 Protein Homology CDS 416 2458 . - 0 ID=cds-TGC96031.1;Parent=gene-C9F09_08035;Dbxref=NCBI_GP:TGC96031.1;Name=TGC96031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462495.1;locus_tag=C9F09_08035;product=oligopeptidase A;protein_id=TGC96031.1;transl_table=11 PYKB01000570.1 Genbank gene 2621 3274 . - . ID=gene-C9F09_08040;Name=C9F09_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08040 PYKB01000570.1 Protein Homology CDS 2621 3274 . - 0 ID=cds-TGC96032.1;Parent=gene-C9F09_08040;Dbxref=NCBI_GP:TGC96032.1;Name=TGC96032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458322.1;locus_tag=C9F09_08040;product=hypothetical protein;protein_id=TGC96032.1;transl_table=11 PYKB01000570.1 Genbank gene 3504 3995 . + . ID=gene-C9F09_08045;Name=C9F09_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08045 PYKB01000570.1 Protein Homology CDS 3504 3995 . + 0 ID=cds-TGC96033.1;Parent=gene-C9F09_08045;Dbxref=NCBI_GP:TGC96033.1;Name=TGC96033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458321.1;locus_tag=C9F09_08045;product=hypothetical protein;protein_id=TGC96033.1;transl_table=11 PYKB01000570.1 Genbank pseudogene 4116 4958 . + . ID=gene-C9F09_08050;Name=C9F09_08050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08050;pseudo=true PYKB01000570.1 Protein Homology CDS 4116 4958 . + 0 ID=cds-C9F09_08050;Parent=gene-C9F09_08050;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458320.1;locus_tag=C9F09_08050;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;pseudo=true;transl_table=11 PYKB01000570.1 Genbank gene 5063 6415 . + . ID=gene-C9F09_08055;Name=C9F09_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08055 PYKB01000570.1 Protein Homology CDS 5063 6415 . + 0 ID=cds-TGC96034.1;Parent=gene-C9F09_08055;Dbxref=NCBI_GP:TGC96034.1;Name=TGC96034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=C9F09_08055;product=glutathione-disulfide reductase;protein_id=TGC96034.1;transl_table=11 PYKB01000570.1 Genbank gene 6462 7071 . - . ID=gene-C9F09_08060;Name=C9F09_08060;end_range=7071,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08060;partial=true PYKB01000570.1 Protein Homology CDS 6462 7071 . - 1 ID=cds-TGC96036.1;Parent=gene-C9F09_08060;Dbxref=NCBI_GP:TGC96036.1;Name=TGC96036.1;end_range=7071,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=C9F09_08060;partial=true;product=L-asparaginase;protein_id=TGC96036.1;transl_table=11 ##sequence-region PYKB01000912.1 1 622 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000912.1 Genbank region 1 622 . + . ID=PYKB01000912.1:1..622;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000912.1 Genbank pseudogene 77 622 . + . ID=gene-C9F09_14995;Name=C9F09_14995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_14995;pseudo=true PYKB01000912.1 Protein Homology CDS 77 622 . + 0 ID=cds-C9F09_14995;Parent=gene-C9F09_14995;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457158.1;locus_tag=C9F09_14995;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000659.1 1 619 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000659.1 Genbank region 1 619 . + . ID=PYKB01000659.1:1..619;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000659.1 Genbank pseudogene 1 355 . + . ID=gene-C9F09_09915;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=pseudogene;locus_tag=C9F09_09915;pseudo=true PYKB01000659.1 Protein Homology CDS 1 355 . + 1 ID=cds-C9F09_09915;Parent=gene-C9F09_09915;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=mraY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=C9F09_09915;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;pseudo=true;transl_table=11 PYKB01000659.1 Genbank gene 358 619 . + . ID=gene-C9F09_09920;Name=murD;end_range=619,.;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=C9F09_09920;partial=true PYKB01000659.1 Protein Homology CDS 358 619 . + 0 ID=cds-TGC94207.1;Parent=gene-C9F09_09920;Dbxref=NCBI_GP:TGC94207.1;Name=TGC94207.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;end_range=619,.;gbkey=CDS;gene=murD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454738.1;locus_tag=C9F09_09920;partial=true;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=TGC94207.1;transl_table=11 ##sequence-region PYKB01000443.1 1 616 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000443.1 Genbank region 1 616 . + . ID=PYKB01000443.1:1..616;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000443.1 Genbank gene 1 616 . - . ID=gene-C9F09_05495;Name=sopB;end_range=616,.;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;gene_synonym=ipgD,sigD;locus_tag=C9F09_05495;partial=true;start_range=.,1 PYKB01000443.1 Protein Homology CDS 1 616 . - 0 ID=cds-TGC98757.1;Parent=gene-C9F09_05495;Dbxref=NCBI_GP:TGC98757.1;Name=TGC98757.1;Note=pathogenicity island 1 protein%3B catalyzes the formation of phosphatidylinositol-3 phosphate from phosphatidylinositol-3%2C4%2C5-triphosphate%3B involved in the formation and maintenance of Salmonella-containing vacuole in the host cell;end_range=616,.;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=C9F09_05495;partial=true;product=inositol phosphatase;protein_id=TGC98757.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001611.1 1 614 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001611.1 Genbank region 1 614 . + . ID=PYKB01001611.1:1..614;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001611.1 Genbank pseudogene 52 614 . - . ID=gene-C9F09_28235;Name=C9F09_28235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28235;pseudo=true PYKB01001611.1 Protein Homology CDS 52 614 . - 2 ID=cds-C9F09_28235;Parent=gene-C9F09_28235;Note=Enables the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=C9F09_28235;product=acetate kinase;pseudo=true;transl_table=11 ##sequence-region PYKB01000200.1 1 613 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000200.1 Genbank region 1 613 . + . ID=PYKB01000200.1:1..613;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000200.1 Genbank gene 1 77 . + . ID=gene-C9F09_02195;Name=C9F09_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02195;partial=true;start_range=.,1 PYKB01000200.1 Protein Homology CDS 1 77 . + 2 ID=cds-TGD03723.1;Parent=gene-C9F09_02195;Dbxref=NCBI_GP:TGD03723.1;Name=TGD03723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457086.1;locus_tag=C9F09_02195;partial=true;product=family 1 flavodoxin reductase;protein_id=TGD03723.1;start_range=.,1;transl_table=11 PYKB01000200.1 Genbank pseudogene 259 540 . + . ID=gene-C9F09_02200;Name=C9F09_02200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02200;pseudo=true PYKB01000200.1 Protein Homology CDS 259 540 . + 0 ID=cds-C9F09_02200;Parent=gene-C9F09_02200;Note=regulates the cadBA operon%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457087.1;locus_tag=C9F09_02200;product=transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKB01000391.1 1 613 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000391.1 Genbank region 1 613 . + . ID=PYKB01000391.1:1..613;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000391.1 Genbank gene 89 613 . + . ID=gene-C9F09_04390;Name=C9F09_04390;end_range=613,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04390;partial=true PYKB01000391.1 Protein Homology CDS 89 613 . + 0 ID=cds-TGC99784.1;Parent=gene-C9F09_04390;Dbxref=NCBI_GP:TGC99784.1;Name=TGC99784.1;end_range=613,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=C9F09_04390;partial=true;product=invasin;protein_id=TGC99784.1;transl_table=11 ##sequence-region PYKB01000318.1 1 612 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000318.1 Genbank region 1 612 . + . ID=PYKB01000318.1:1..612;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000318.1 Genbank gene 1 612 . - . ID=gene-C9F09_03575;Name=C9F09_03575;end_range=612,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03575;partial=true;start_range=.,1 PYKB01000318.1 Protein Homology CDS 1 612 . - 2 ID=cds-TGD01173.1;Parent=gene-C9F09_03575;Dbxref=NCBI_GP:TGD01173.1;Name=TGD01173.1;end_range=612,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456731.1;locus_tag=C9F09_03575;partial=true;product=hypothetical protein;protein_id=TGD01173.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001396.1 1 612 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001396.1 Genbank region 1 612 . + . ID=PYKB01001396.1:1..612;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001396.1 Genbank gene 1 612 . - . ID=gene-C9F09_23985;Name=C9F09_23985;end_range=612,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23985;partial=true;start_range=.,1 PYKB01001396.1 Protein Homology CDS 1 612 . - 1 ID=cds-TGC79552.1;Parent=gene-C9F09_23985;Dbxref=NCBI_GP:TGC79552.1;Name=TGC79552.1;end_range=612,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457045.1;locus_tag=C9F09_23985;partial=true;product=IMP dehydrogenase;protein_id=TGC79552.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000746.1 1 605 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000746.1 Genbank region 1 605 . + . ID=PYKB01000746.1:1..605;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000746.1 Genbank gene 1 605 . + . ID=gene-C9F09_11490;Name=C9F09_11490;end_range=605,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11490;partial=true;start_range=.,1 PYKB01000746.1 Protein Homology CDS 1 605 . + 2 ID=cds-TGC92979.1;Parent=gene-C9F09_11490;Dbxref=NCBI_GP:TGC92979.1;Name=TGC92979.1;Note=with ProWX is involved in the high-affinity uptake of glycine betaine;end_range=605,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=C9F09_11490;partial=true;product=glycine betaine/L-proline ABC transporter ATP-binding protein;protein_id=TGC92979.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000397.1 1 603 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000397.1 Genbank region 1 603 . + . ID=PYKB01000397.1:1..603;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000397.1 Genbank pseudogene 8 603 . + . ID=gene-C9F09_04425;Name=C9F09_04425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04425;pseudo=true PYKB01000397.1 Protein Homology CDS 8 603 . + 0 ID=cds-C9F09_04425;Parent=gene-C9F09_04425;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456324.1;locus_tag=C9F09_04425;product=ribonuclease D;pseudo=true;transl_table=11 ##sequence-region PYKB01001380.1 1 7052 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001380.1 Genbank region 1 7052 . + . ID=PYKB01001380.1:1..7052;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001380.1 Genbank gene 12 1145 . + . ID=gene-C9F09_23780;Name=C9F09_23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23780 PYKB01001380.1 Protein Homology CDS 12 1145 . + 0 ID=cds-TGC79876.1;Parent=gene-C9F09_23780;Dbxref=NCBI_GP:TGC79876.1;Name=TGC79876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000434200.1;locus_tag=C9F09_23780;product=cytoplasmic protein;protein_id=TGC79876.1;transl_table=11 PYKB01001380.1 Genbank gene 1234 3168 . + . ID=gene-C9F09_23785;Name=C9F09_23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23785 PYKB01001380.1 Protein Homology CDS 1234 3168 . + 0 ID=cds-TGC79871.1;Parent=gene-C9F09_23785;Dbxref=NCBI_GP:TGC79871.1;Name=TGC79871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=C9F09_23785;product=exoribonuclease II;protein_id=TGC79871.1;transl_table=11 PYKB01001380.1 Genbank gene 3194 3415 . + . ID=gene-C9F09_23790;Name=C9F09_23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23790 PYKB01001380.1 Protein Homology CDS 3194 3415 . + 0 ID=cds-TGC79872.1;Parent=gene-C9F09_23790;Dbxref=NCBI_GP:TGC79872.1;Name=TGC79872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218763.1;locus_tag=C9F09_23790;product=hypothetical protein;protein_id=TGC79872.1;transl_table=11 PYKB01001380.1 Genbank pseudogene 3430 5412 . + . ID=gene-C9F09_23795;Name=C9F09_23795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23795;pseudo=true PYKB01001380.1 Protein Homology CDS 3430 5412 . + 0 ID=cds-C9F09_23795;Parent=gene-C9F09_23795;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=C9F09_23795;product=cyclic di-GMP phosphodiesterase;pseudo=true;transl_table=11 PYKB01001380.1 Genbank gene 5534 5713 . + . ID=gene-C9F09_23800;Name=C9F09_23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23800 PYKB01001380.1 Protein Homology CDS 5534 5713 . + 0 ID=cds-TGC79873.1;Parent=gene-C9F09_23800;Dbxref=NCBI_GP:TGC79873.1;Name=TGC79873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=C9F09_23800;product=hypothetical protein;protein_id=TGC79873.1;transl_table=11 PYKB01001380.1 Genbank gene 5800 6552 . + . ID=gene-C9F09_23805;Name=C9F09_23805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23805 PYKB01001380.1 Protein Homology CDS 5800 6552 . + 0 ID=cds-TGC79874.1;Parent=gene-C9F09_23805;Dbxref=NCBI_GP:TGC79874.1;Name=TGC79874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455793.1;locus_tag=C9F09_23805;product=DeoR/GlpR transcriptional regulator;protein_id=TGC79874.1;transl_table=11 PYKB01001380.1 Genbank gene 6811 7052 . + . ID=gene-C9F09_23810;Name=C9F09_23810;end_range=7052,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23810;partial=true PYKB01001380.1 Protein Homology CDS 6811 7052 . + 0 ID=cds-TGC79875.1;Parent=gene-C9F09_23810;Dbxref=NCBI_GP:TGC79875.1;Name=TGC79875.1;end_range=7052,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=C9F09_23810;partial=true;product=osmotically-inducible lipoprotein OsmB;protein_id=TGC79875.1;transl_table=11 ##sequence-region PYKB01000646.1 1 597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000646.1 Genbank region 1 597 . + . ID=PYKB01000646.1:1..597;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000646.1 Genbank gene 1 171 . - . ID=gene-C9F09_09685;Name=C9F09_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09685;partial=true;start_range=.,1 PYKB01000646.1 Protein Homology CDS 1 171 . - 0 ID=cds-TGC94445.1;Parent=gene-C9F09_09685;Dbxref=NCBI_GP:TGC94445.1;Name=TGC94445.1;Note=converts protoheme IX and farnesyl diphosphate to heme O;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308509.1;locus_tag=C9F09_09685;partial=true;product=protoheme IX farnesyltransferase;protein_id=TGC94445.1;start_range=.,1;transl_table=11 PYKB01000646.1 Genbank gene 183 512 . - . ID=gene-C9F09_09690;Name=C9F09_09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09690 PYKB01000646.1 Protein Homology CDS 183 512 . - 0 ID=cds-TGC94443.1;Parent=gene-C9F09_09690;Dbxref=NCBI_GP:TGC94443.1;Name=TGC94443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455037.1;locus_tag=C9F09_09690;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=TGC94443.1;transl_table=11 PYKB01000646.1 Genbank gene 512 597 . - . ID=gene-C9F09_09695;Name=C9F09_09695;end_range=597,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09695;partial=true PYKB01000646.1 Protein Homology CDS 512 597 . - 2 ID=cds-TGC94444.1;Parent=gene-C9F09_09695;Dbxref=NCBI_GP:TGC94444.1;Name=TGC94444.1;end_range=597,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455038.1;locus_tag=C9F09_09695;partial=true;product=cytochrome o ubiquinol oxidase subunit III;protein_id=TGC94444.1;transl_table=11 ##sequence-region PYKB01000342.1 1 597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000342.1 Genbank region 1 597 . + . ID=PYKB01000342.1:1..597;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000342.1 Genbank gene 1 201 . + . ID=gene-C9F09_03805;Name=C9F09_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03805;partial=true;start_range=.,1 PYKB01000342.1 Protein Homology CDS 1 201 . + 0 ID=cds-TGD00659.1;Parent=gene-C9F09_03805;Dbxref=NCBI_GP:TGD00659.1;Name=TGD00659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455630.1;locus_tag=C9F09_03805;partial=true;product=hypothetical protein;protein_id=TGD00659.1;start_range=.,1;transl_table=11 PYKB01000342.1 Genbank gene 225 597 . + . ID=gene-C9F09_03810;Name=C9F09_03810;end_range=597,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03810;partial=true PYKB01000342.1 Protein Homology CDS 225 597 . + 0 ID=cds-TGD00660.1;Parent=gene-C9F09_03810;Dbxref=NCBI_GP:TGD00660.1;Name=TGD00660.1;end_range=597,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455631.1;locus_tag=C9F09_03810;partial=true;product=molecular chaperone;protein_id=TGD00660.1;transl_table=11 ##sequence-region PYKB01000084.1 1 597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000084.1 Genbank region 1 597 . + . ID=PYKB01000084.1:1..597;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000084.1 Genbank gene 1 597 . + . ID=gene-C9F09_01020;Name=C9F09_01020;end_range=597,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01020;partial=true;start_range=.,1 PYKB01000084.1 Protein Homology CDS 1 597 . + 1 ID=cds-TGD05779.1;Parent=gene-C9F09_01020;Dbxref=NCBI_GP:TGD05779.1;Name=TGD05779.1;end_range=597,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=C9F09_01020;partial=true;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=TGD05779.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000051.1 1 593 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000051.1 Genbank region 1 593 . + . ID=PYKB01000051.1:1..593;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000051.1 Genbank pseudogene 1 552 . - . ID=gene-C9F09_00570;Name=C9F09_00570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00570;pseudo=true PYKB01000051.1 Protein Homology CDS 1 552 . - 0 ID=cds-C9F09_00570;Parent=gene-C9F09_00570;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457063.1;locus_tag=C9F09_00570;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000188.1 1 593 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000188.1 Genbank region 1 593 . + . ID=PYKB01000188.1:1..593;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000188.1 Genbank pseudogene 1 593 . + . ID=gene-C9F09_02125;Name=C9F09_02125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02125;pseudo=true PYKB01000188.1 Protein Homology CDS 1 593 . + 1 ID=cds-C9F09_02125;Parent=gene-C9F09_02125;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457476.1;locus_tag=C9F09_02125;product=transketolase;pseudo=true;transl_table=11 ##sequence-region PYKB01000505.1 1 588 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000505.1 Genbank region 1 588 . + . ID=PYKB01000505.1:1..588;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000505.1 Genbank pseudogene 61 588 . + . ID=gene-C9F09_06490;Name=C9F09_06490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_06490;pseudo=true PYKB01000505.1 Protein Homology CDS 61 588 . + 0 ID=cds-C9F09_06490;Parent=gene-C9F09_06490;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456804.1;locus_tag=C9F09_06490;product=periplasmic nitrate reductase subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKB01001301.1 1 587 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001301.1 Genbank region 1 587 . + . ID=PYKB01001301.1:1..587;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001301.1 Genbank gene 1 228 . - . ID=gene-C9F09_22280;Name=C9F09_22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22280;partial=true;start_range=.,1 PYKB01001301.1 Protein Homology CDS 1 228 . - 0 ID=cds-TGC81559.1;Parent=gene-C9F09_22280;Dbxref=NCBI_GP:TGC81559.1;Name=TGC81559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456101.1;locus_tag=C9F09_22280;partial=true;product=LysR family transcriptional regulator;protein_id=TGC81559.1;start_range=.,1;transl_table=11 PYKB01001301.1 Genbank gene 341 587 . + . ID=gene-C9F09_22285;Name=C9F09_22285;end_range=587,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22285;partial=true PYKB01001301.1 Protein Homology CDS 341 587 . + 0 ID=cds-TGC81560.1;Parent=gene-C9F09_22285;Dbxref=NCBI_GP:TGC81560.1;Name=TGC81560.1;Note=uncharacterized member of the major facilitator superfamily (MFS);end_range=587,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456102.1;locus_tag=C9F09_22285;partial=true;product=Bcr/CflA family multidrug efflux transporter;protein_id=TGC81560.1;transl_table=11 ##sequence-region PYKB01000527.1 1 579 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000527.1 Genbank region 1 579 . + . ID=PYKB01000527.1:1..579;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000527.1 Genbank pseudogene 1 579 . - . ID=gene-C9F09_07095;Name=C9F09_07095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07095;pseudo=true PYKB01000527.1 Protein Homology CDS 1 579 . - 2 ID=cds-C9F09_07095;Parent=gene-C9F09_07095;Note=with SsaC forms part of a protein export system across the inner and outer cell membranes%3B part of the Salmonella pathogenicity island 2%3B part of the type III secretion system%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456114.1;locus_tag=C9F09_07095;product=EscV/YscV/HrcV family type III secretion system export apparatus protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001456.1 1 575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001456.1 Genbank region 1 575 . + . ID=PYKB01001456.1:1..575;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001456.1 Genbank pseudogene 1 501 . + . ID=gene-C9F09_25295;Name=C9F09_25295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_25295;pseudo=true PYKB01001456.1 Protein Homology CDS 1 501 . + 0 ID=cds-C9F09_25295;Parent=gene-C9F09_25295;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455388.1;locus_tag=C9F09_25295;product=oxidoreductase;pseudo=true;transl_table=11 ##sequence-region PYKB01001036.1 1 572 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001036.1 Genbank region 1 572 . + . ID=PYKB01001036.1:1..572;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001036.1 Genbank gene 1 269 . + . ID=gene-C9F09_17280;Name=C9F09_17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17280;partial=true;start_range=.,1 PYKB01001036.1 Protein Homology CDS 1 269 . + 2 ID=cds-TGC87474.1;Parent=gene-C9F09_17280;Dbxref=NCBI_GP:TGC87474.1;Name=TGC87474.1;Note=catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462630.3;locus_tag=C9F09_17280;partial=true;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase;protein_id=TGC87474.1;start_range=.,1;transl_table=11 PYKB01001036.1 Genbank gene 250 572 . + . ID=gene-C9F09_17285;Name=C9F09_17285;end_range=572,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17285;partial=true PYKB01001036.1 Protein Homology CDS 250 572 . + 0 ID=cds-TGC87475.1;Parent=gene-C9F09_17285;Dbxref=NCBI_GP:TGC87475.1;Name=TGC87475.1;end_range=572,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458195.1;locus_tag=C9F09_17285;partial=true;product=dUTP diphosphatase;protein_id=TGC87475.1;transl_table=11 ##sequence-region PYKB01001295.1 1 7005 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001295.1 Genbank region 1 7005 . + . ID=PYKB01001295.1:1..7005;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001295.1 Genbank gene 1 197 . - . ID=gene-C9F09_22115;Name=C9F09_22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22115;partial=true;start_range=.,1 PYKB01001295.1 Protein Homology CDS 1 197 . - 0 ID=cds-TGC81745.1;Parent=gene-C9F09_22115;Dbxref=NCBI_GP:TGC81745.1;Name=TGC81745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458721.1;locus_tag=C9F09_22115;partial=true;product=DUF2724 domain-containing protein;protein_id=TGC81745.1;start_range=.,1;transl_table=11 PYKB01001295.1 Genbank gene 205 714 . - . ID=gene-C9F09_22120;Name=C9F09_22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22120 PYKB01001295.1 Protein Homology CDS 205 714 . - 0 ID=cds-TGC81746.1;Parent=gene-C9F09_22120;Dbxref=NCBI_GP:TGC81746.1;Name=TGC81746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458722.1;locus_tag=C9F09_22120;product=hypothetical protein;protein_id=TGC81746.1;transl_table=11 PYKB01001295.1 Genbank gene 747 989 . - . ID=gene-C9F09_22125;Name=C9F09_22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22125 PYKB01001295.1 Protein Homology CDS 747 989 . - 0 ID=cds-TGC81747.1;Parent=gene-C9F09_22125;Dbxref=NCBI_GP:TGC81747.1;Name=TGC81747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458723.1;locus_tag=C9F09_22125;product=Rha family transcriptional regulator;protein_id=TGC81747.1;transl_table=11 PYKB01001295.1 Genbank gene 1106 1738 . + . ID=gene-C9F09_22130;Name=C9F09_22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22130 PYKB01001295.1 Protein Homology CDS 1106 1738 . + 0 ID=cds-TGC81748.1;Parent=gene-C9F09_22130;Dbxref=NCBI_GP:TGC81748.1;Name=TGC81748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458724.1;locus_tag=C9F09_22130;product=phage repressor protein;protein_id=TGC81748.1;transl_table=11 PYKB01001295.1 Genbank gene 1741 2760 . + . ID=gene-C9F09_22135;Name=C9F09_22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22135 PYKB01001295.1 Protein Homology CDS 1741 2760 . + 0 ID=cds-TGC81749.1;Parent=gene-C9F09_22135;Dbxref=NCBI_GP:TGC81749.1;Name=TGC81749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461666.1;locus_tag=C9F09_22135;product=integrase;protein_id=TGC81749.1;transl_table=11 PYKB01001295.1 Genbank gene 2820 3287 . + . ID=gene-C9F09_22140;Name=C9F09_22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22140 PYKB01001295.1 GeneMarkS+ CDS 2820 3287 . + 0 ID=cds-TGC81750.1;Parent=gene-C9F09_22140;Dbxref=NCBI_GP:TGC81750.1;Name=TGC81750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_22140;product=hypothetical protein;protein_id=TGC81750.1;transl_table=11 PYKB01001295.1 Genbank gene 3597 4298 . + . ID=gene-C9F09_22145;Name=C9F09_22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22145 PYKB01001295.1 GeneMarkS+ CDS 3597 4298 . + 0 ID=cds-TGC81751.1;Parent=gene-C9F09_22145;Dbxref=NCBI_GP:TGC81751.1;Name=TGC81751.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_22145;product=hypothetical protein;protein_id=TGC81751.1;transl_table=11 PYKB01001295.1 Genbank gene 4388 4573 . - . ID=gene-C9F09_22150;Name=C9F09_22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22150 PYKB01001295.1 Protein Homology CDS 4388 4573 . - 0 ID=cds-TGC81755.1;Parent=gene-C9F09_22150;Dbxref=NCBI_GP:TGC81755.1;Name=TGC81755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748185.1;locus_tag=C9F09_22150;product=hypothetical protein;protein_id=TGC81755.1;transl_table=11 PYKB01001295.1 Genbank gene 4599 4814 . - . ID=gene-C9F09_22155;Name=C9F09_22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22155 PYKB01001295.1 Protein Homology CDS 4599 4814 . - 0 ID=cds-TGC81752.1;Parent=gene-C9F09_22155;Dbxref=NCBI_GP:TGC81752.1;Name=TGC81752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016760.1;locus_tag=C9F09_22155;product=late control protein B;protein_id=TGC81752.1;transl_table=11 PYKB01001295.1 Genbank gene 4882 5985 . - . ID=gene-C9F09_22160;Name=C9F09_22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22160 PYKB01001295.1 Protein Homology CDS 4882 5985 . - 0 ID=cds-TGC81753.1;Parent=gene-C9F09_22160;Dbxref=NCBI_GP:TGC81753.1;Name=TGC81753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458684.1;locus_tag=C9F09_22160;product=late control protein D;protein_id=TGC81753.1;transl_table=11 PYKB01001295.1 Genbank gene 5982 6467 . - . ID=gene-C9F09_22165;Name=C9F09_22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22165 PYKB01001295.1 Protein Homology CDS 5982 6467 . - 0 ID=cds-TGC81754.1;Parent=gene-C9F09_22165;Dbxref=NCBI_GP:TGC81754.1;Name=TGC81754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458685.1;locus_tag=C9F09_22165;product=phage tail protein;protein_id=TGC81754.1;transl_table=11 PYKB01001295.1 Genbank pseudogene 6464 6883 . - . ID=gene-C9F09_22170;Name=C9F09_22170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22170;pseudo=true PYKB01001295.1 Protein Homology CDS 6464 6883 . - 0 ID=cds-C9F09_22170;Parent=gene-C9F09_22170;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458686.1;locus_tag=C9F09_22170;product=phage tail protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001670.1 1 570 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001670.1 Genbank region 1 570 . + . ID=PYKB01001670.1:1..570;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001670.1 Genbank gene 1 475 . + . ID=gene-C9F09_29065;Name=C9F09_29065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29065;partial=true;start_range=.,1 PYKB01001670.1 Protein Homology CDS 1 475 . + 1 ID=cds-TGC73100.1;Parent=gene-C9F09_29065;Dbxref=NCBI_GP:TGC73100.1;Name=TGC73100.1;Note=with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457741.1;locus_tag=C9F09_29065;partial=true;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=TGC73100.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000235.1 1 569 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000235.1 Genbank region 1 569 . + . ID=PYKB01000235.1:1..569;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000235.1 Genbank gene 1 569 . - . ID=gene-C9F09_02565;Name=C9F09_02565;end_range=569,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02565;partial=true;start_range=.,1 PYKB01000235.1 Protein Homology CDS 1 569 . - 2 ID=cds-TGD02987.1;Parent=gene-C9F09_02565;Dbxref=NCBI_GP:TGD02987.1;Name=TGD02987.1;end_range=569,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=C9F09_02565;partial=true;product=MFS transporter;protein_id=TGD02987.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001643.1 1 565 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001643.1 Genbank region 1 565 . + . ID=PYKB01001643.1:1..565;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001643.1 Genbank gene 66 470 . + . ID=gene-C9F09_28715;Name=C9F09_28715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28715 PYKB01001643.1 Protein Homology CDS 66 470 . + 0 ID=cds-TGC73709.1;Parent=gene-C9F09_28715;Dbxref=NCBI_GP:TGC73709.1;Name=TGC73709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=C9F09_28715;product=hypothetical protein;protein_id=TGC73709.1;transl_table=11 ##sequence-region PYKB01001617.1 1 565 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001617.1 Genbank region 1 565 . + . ID=PYKB01001617.1:1..565;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001617.1 Genbank pseudogene 1 565 . + . ID=gene-C9F09_28315;Name=C9F09_28315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28315;pseudo=true PYKB01001617.1 Protein Homology CDS 1 565 . + 2 ID=cds-C9F09_28315;Parent=gene-C9F09_28315;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457158.1;locus_tag=C9F09_28315;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000774.1 1 562 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000774.1 Genbank region 1 562 . + . ID=PYKB01000774.1:1..562;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000774.1 Genbank gene 1 411 . - . ID=gene-C9F09_11995;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=C9F09_11995;partial=true;start_range=.,1 PYKB01000774.1 Protein Homology CDS 1 411 . - 0 ID=cds-TGC92551.1;Parent=gene-C9F09_11995;Dbxref=NCBI_GP:TGC92551.1;Name=TGC92551.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=C9F09_11995;partial=true;product=SPI-1 type III secretion system protein SpaO;protein_id=TGC92551.1;start_range=.,1;transl_table=11 PYKB01000774.1 Genbank gene 411 562 . - . ID=gene-C9F09_12000;Name=spaN;end_range=562,.;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;gene_synonym=invJ;locus_tag=C9F09_12000;partial=true PYKB01000774.1 Protein Homology CDS 411 562 . - 2 ID=cds-TGC92550.1;Parent=gene-C9F09_12000;Dbxref=NCBI_GP:TGC92550.1;Name=TGC92550.1;Note=involved in the surface presentation of antigens needed for the invasion of Salmonella into host cells;end_range=562,.;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457286.1;locus_tag=C9F09_12000;partial=true;product=antigen presentation protein SpaN;protein_id=TGC92550.1;transl_table=11 ##sequence-region PYKB01001440.1 1 562 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001440.1 Genbank region 1 562 . + . ID=PYKB01001440.1:1..562;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001440.1 Genbank gene 1 562 . + . ID=gene-C9F09_24870;Name=serB;end_range=562,.;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=C9F09_24870;partial=true;start_range=.,1 PYKB01001440.1 Protein Homology CDS 1 562 . + 0 ID=cds-TGC78547.1;Parent=gene-C9F09_24870;Dbxref=NCBI_GP:TGC78547.1;Name=TGC78547.1;end_range=562,.;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456756.1;locus_tag=C9F09_24870;partial=true;product=phosphoserine phosphatase SerB;protein_id=TGC78547.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000733.1 1 561 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000733.1 Genbank region 1 561 . + . ID=PYKB01000733.1:1..561;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000733.1 Genbank gene 11 561 . + . ID=gene-C9F09_11265;Name=C9F09_11265;end_range=561,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11265;partial=true PYKB01000733.1 Protein Homology CDS 11 561 . + 0 ID=cds-TGC93222.1;Parent=gene-C9F09_11265;Dbxref=NCBI_GP:TGC93222.1;Name=TGC93222.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;end_range=561,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458882.1;locus_tag=C9F09_11265;partial=true;product=ornithine carbamoyltransferase subunit F;protein_id=TGC93222.1;transl_table=11 ##sequence-region PYKB01001080.1 1 556 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001080.1 Genbank region 1 556 . + . ID=PYKB01001080.1:1..556;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001080.1 Genbank pseudogene 76 556 . - . ID=gene-C9F09_18060;Name=C9F09_18060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18060;pseudo=true PYKB01001080.1 Protein Homology CDS 76 556 . - 1 ID=cds-C9F09_18060;Parent=gene-C9F09_18060;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044775.1;locus_tag=C9F09_18060;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000609.1 1 549 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000609.1 Genbank region 1 549 . + . ID=PYKB01000609.1:1..549;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000609.1 Genbank gene 1 221 . - . ID=gene-C9F09_09020;Name=C9F09_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09020;partial=true;start_range=.,1 PYKB01000609.1 Protein Homology CDS 1 221 . - 0 ID=cds-TGC95162.1;Parent=gene-C9F09_09020;Dbxref=NCBI_GP:TGC95162.1;Name=TGC95162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456726.1;locus_tag=C9F09_09020;partial=true;product=beta-glucosidase BglX;protein_id=TGC95162.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000144.1 1 549 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000144.1 Genbank region 1 549 . + . ID=PYKB01000144.1:1..549;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000144.1 Genbank pseudogene 27 503 . - . ID=gene-C9F09_01645;Name=C9F09_01645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01645;pseudo=true PYKB01000144.1 Protein Homology CDS 27 503 . - 0 ID=cds-C9F09_01645;Parent=gene-C9F09_01645;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129221.1;locus_tag=C9F09_01645;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKB01001526.1 1 7000 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001526.1 Genbank region 1 7000 . + . ID=PYKB01001526.1:1..7000;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001526.1 Genbank pseudogene 17 1195 . + . ID=gene-C9F09_26520;Name=C9F09_26520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_26520;pseudo=true PYKB01001526.1 Protein Homology CDS 17 1195 . + 0 ID=cds-C9F09_26520;Parent=gene-C9F09_26520;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455457.1;locus_tag=C9F09_26520;product=amino acid permease;pseudo=true;transl_table=11 PYKB01001526.1 Genbank gene 1488 2312 . - . ID=gene-C9F09_26525;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=C9F09_26525 PYKB01001526.1 Protein Homology CDS 1488 2312 . - 0 ID=cds-TGC76607.1;Parent=gene-C9F09_26525;Dbxref=NCBI_GP:TGC76607.1;Name=TGC76607.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459945.3;locus_tag=C9F09_26525;product=pyruvate formate lyase 1-activating protein;protein_id=TGC76607.1;transl_table=11 PYKB01001526.1 Genbank gene 2860 3813 . + . ID=gene-C9F09_26530;Name=C9F09_26530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26530 PYKB01001526.1 Protein Homology CDS 2860 3813 . + 0 ID=cds-TGC76608.1;Parent=gene-C9F09_26530;Dbxref=NCBI_GP:TGC76608.1;Name=TGC76608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145561.1;locus_tag=C9F09_26530;product=type III secretion system effector SopD2;protein_id=TGC76608.1;transl_table=11 PYKB01001526.1 Genbank gene 3885 6167 . - . ID=gene-C9F09_26535;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=C9F09_26535 PYKB01001526.1 Protein Homology CDS 3885 6167 . - 0 ID=cds-TGC76609.1;Parent=gene-C9F09_26535;Dbxref=NCBI_GP:TGC76609.1;Name=TGC76609.1;gbkey=CDS;gene=pflB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455460.1;locus_tag=C9F09_26535;product=formate C-acetyltransferase;protein_id=TGC76609.1;transl_table=11 PYKB01001526.1 Genbank gene 6227 7000 . - . ID=gene-C9F09_26540;Name=C9F09_26540;end_range=7000,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26540;partial=true PYKB01001526.1 Protein Homology CDS 6227 7000 . - 0 ID=cds-TGC76610.1;Parent=gene-C9F09_26540;Dbxref=NCBI_GP:TGC76610.1;Name=TGC76610.1;end_range=7000,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455461.1;locus_tag=C9F09_26540;partial=true;product=formate transporter FocA;protein_id=TGC76610.1;transl_table=11 ##sequence-region PYKB01000298.1 1 548 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000298.1 Genbank region 1 548 . + . ID=PYKB01000298.1:1..548;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000298.1 Genbank gene 103 548 . + . ID=gene-C9F09_03380;Name=C9F09_03380;end_range=548,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03380;partial=true PYKB01000298.1 Protein Homology CDS 103 548 . + 0 ID=cds-TGD01522.1;Parent=gene-C9F09_03380;Dbxref=NCBI_GP:TGD01522.1;Name=TGD01522.1;Note=necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space;end_range=548,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005139913.1;locus_tag=C9F09_03380;partial=true;product=glucan biosynthesis glucosyltransferase H;protein_id=TGD01522.1;transl_table=11 ##sequence-region PYKB01000965.1 1 546 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000965.1 Genbank region 1 546 . + . ID=PYKB01000965.1:1..546;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000965.1 Genbank pseudogene 76 297 . - . ID=gene-C9F09_15970;Name=C9F09_15970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15970;pseudo=true PYKB01000965.1 Protein Homology CDS 76 297 . - 0 ID=cds-C9F09_15970;Parent=gene-C9F09_15970;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456173.1;locus_tag=C9F09_15970;product=phenylalanine--tRNA ligase subunit beta;pseudo=true;transl_table=11 PYKB01000965.1 Genbank pseudogene 313 462 . - . ID=gene-C9F09_15975;Name=C9F09_15975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15975;pseudo=true PYKB01000965.1 Protein Homology CDS 313 462 . - 0 ID=cds-C9F09_15975;Parent=gene-C9F09_15975;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004395419.1;locus_tag=C9F09_15975;product=phenylalanine--tRNA ligase subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKB01001146.1 1 546 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001146.1 Genbank region 1 546 . + . ID=PYKB01001146.1:1..546;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001146.1 Genbank gene 1 546 . - . ID=gene-C9F09_19380;Name=C9F09_19380;end_range=546,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19380;partial=true;start_range=.,1 PYKB01001146.1 Protein Homology CDS 1 546 . - 2 ID=cds-TGC84787.1;Parent=gene-C9F09_19380;Dbxref=NCBI_GP:TGC84787.1;Name=TGC84787.1;end_range=546,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016158396.1;locus_tag=C9F09_19380;partial=true;product=tryptophan synthase subunit beta;protein_id=TGC84787.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001057.1 1 545 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001057.1 Genbank region 1 545 . + . ID=PYKB01001057.1:1..545;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001057.1 Genbank pseudogene 51 350 . - . ID=gene-C9F09_17720;Name=C9F09_17720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17720;pseudo=true PYKB01001057.1 Protein Homology CDS 51 350 . - 0 ID=cds-C9F09_17720;Parent=gene-C9F09_17720;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457041.1;locus_tag=C9F09_17720;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001057.1 Genbank gene 366 545 . - . ID=gene-C9F09_17725;Name=C9F09_17725;end_range=545,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17725;partial=true PYKB01001057.1 Protein Homology CDS 366 545 . - 0 ID=cds-TGC87012.1;Parent=gene-C9F09_17725;Dbxref=NCBI_GP:TGC87012.1;Name=TGC87012.1;end_range=545,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311394.1;locus_tag=C9F09_17725;partial=true;product=hypothetical protein;protein_id=TGC87012.1;transl_table=11 ##sequence-region PYKB01000697.1 1 545 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000697.1 Genbank region 1 545 . + . ID=PYKB01000697.1:1..545;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000697.1 Genbank gene 1 545 . - . ID=gene-C9F09_10615;Name=C9F09_10615;end_range=545,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10615;partial=true;start_range=.,1 PYKB01000697.1 Protein Homology CDS 1 545 . - 0 ID=cds-TGC93747.1;Parent=gene-C9F09_10615;Dbxref=NCBI_GP:TGC93747.1;Name=TGC93747.1;Note=involved in the transport of nitrate and nitrite;end_range=545,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455920.1;locus_tag=C9F09_10615;partial=true;product=nitrate/nitrite transporter;protein_id=TGC93747.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000309.1 1 544 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000309.1 Genbank region 1 544 . + . ID=PYKB01000309.1:1..544;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000309.1 Genbank gene 1 544 . - . ID=gene-C9F09_03465;Name=mdoG;end_range=544,.;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=C9F09_03465;partial=true;start_range=.,1 PYKB01000309.1 Protein Homology CDS 1 544 . - 0 ID=cds-TGD01393.1;Parent=gene-C9F09_03465;Dbxref=NCBI_GP:TGD01393.1;Name=TGD01393.1;end_range=544,.;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455644.1;locus_tag=C9F09_03465;partial=true;product=glucans biosynthesis protein MdoG;protein_id=TGD01393.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000466.1 1 542 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000466.1 Genbank region 1 542 . + . ID=PYKB01000466.1:1..542;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000466.1 Genbank pseudogene 80 542 . + . ID=gene-C9F09_05845;Name=C9F09_05845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05845;pseudo=true PYKB01000466.1 Protein Homology CDS 80 542 . + 0 ID=cds-C9F09_05845;Parent=gene-C9F09_05845;Note=Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose ph%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458148.1;locus_tag=C9F09_05845;product=two-component system sensor histidine kinase UhpB;pseudo=true;transl_table=11 ##sequence-region PYKB01001631.1 1 541 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001631.1 Genbank region 1 541 . + . ID=PYKB01001631.1:1..541;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001631.1 Genbank gene 1 256 . - . ID=gene-C9F09_28490;Name=C9F09_28490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28490;partial=true;start_range=.,1 PYKB01001631.1 Protein Homology CDS 1 256 . - 0 ID=cds-TGC74072.1;Parent=gene-C9F09_28490;Dbxref=NCBI_GP:TGC74072.1;Name=TGC74072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458166.1;locus_tag=C9F09_28490;partial=true;product=SelA-like pyridoxal phosphate-dependent enzyme;protein_id=TGC74072.1;start_range=.,1;transl_table=11 PYKB01001631.1 Genbank gene 260 541 . - . ID=gene-C9F09_28495;Name=C9F09_28495;end_range=541,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28495;partial=true PYKB01001631.1 Protein Homology CDS 260 541 . - 0 ID=cds-TGC74073.1;Parent=gene-C9F09_28495;Dbxref=NCBI_GP:TGC74073.1;Name=TGC74073.1;end_range=541,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458165.1;locus_tag=C9F09_28495;partial=true;product=PTS fructose transporter subunit IID;protein_id=TGC74073.1;transl_table=11 ##sequence-region PYKB01000330.1 1 537 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000330.1 Genbank region 1 537 . + . ID=PYKB01000330.1:1..537;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000330.1 Genbank gene 1 344 . + . ID=gene-C9F09_03660;Name=C9F09_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03660;partial=true;start_range=.,1 PYKB01000330.1 Protein Homology CDS 1 344 . + 2 ID=cds-TGD00943.1;Parent=gene-C9F09_03660;Dbxref=NCBI_GP:TGD00943.1;Name=TGD00943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653833.1;locus_tag=C9F09_03660;partial=true;product=2-ketogluconate transporter;protein_id=TGD00943.1;start_range=.,1;transl_table=11 PYKB01000330.1 Genbank gene 341 537 . + . ID=gene-C9F09_03665;Name=C9F09_03665;end_range=537,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03665;partial=true PYKB01000330.1 Protein Homology CDS 341 537 . + 0 ID=cds-TGD00944.1;Parent=gene-C9F09_03665;Dbxref=NCBI_GP:TGD00944.1;Name=TGD00944.1;end_range=537,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462432.1;locus_tag=C9F09_03665;partial=true;product=dihydroxy-acid dehydratase;protein_id=TGD00944.1;transl_table=11 ##sequence-region PYKB01001217.1 1 534 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001217.1 Genbank region 1 534 . + . ID=PYKB01001217.1:1..534;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001217.1 Genbank gene 1 534 . + . ID=gene-C9F09_20695;Name=C9F09_20695;end_range=534,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20695;partial=true;start_range=.,1 PYKB01001217.1 Protein Homology CDS 1 534 . + 0 ID=cds-TGC83073.1;Parent=gene-C9F09_20695;Dbxref=NCBI_GP:TGC83073.1;Name=TGC83073.1;Note=Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1;end_range=534,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457404.1;locus_tag=C9F09_20695;partial=true;product=bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-ACP synthetase;protein_id=TGC83073.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000268.1 1 6981 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000268.1 Genbank region 1 6981 . + . ID=PYKB01000268.1:1..6981;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000268.1 Genbank gene 1 915 . + . ID=gene-C9F09_03010;Name=C9F09_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03010;partial=true;start_range=.,1 PYKB01000268.1 Protein Homology CDS 1 915 . + 0 ID=cds-TGD02052.1;Parent=gene-C9F09_03010;Dbxref=NCBI_GP:TGD02052.1;Name=TGD02052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457139.1;locus_tag=C9F09_03010;partial=true;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=TGD02052.1;start_range=.,1;transl_table=11 PYKB01000268.1 Genbank gene 973 1881 . + . ID=gene-C9F09_03015;Name=C9F09_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03015 PYKB01000268.1 Protein Homology CDS 973 1881 . + 0 ID=cds-TGD02053.1;Parent=gene-C9F09_03015;Dbxref=NCBI_GP:TGD02053.1;Name=TGD02053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457138.1;locus_tag=C9F09_03015;product=SMP-30/gluconolactonase/LRE family protein;protein_id=TGD02053.1;transl_table=11 PYKB01000268.1 Genbank gene 1842 3002 . - . ID=gene-C9F09_03020;Name=C9F09_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03020 PYKB01000268.1 Protein Homology CDS 1842 3002 . - 0 ID=cds-TGD02054.1;Parent=gene-C9F09_03020;Dbxref=NCBI_GP:TGD02054.1;Name=TGD02054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=C9F09_03020;product=chorismate mutase;protein_id=TGD02054.1;transl_table=11 PYKB01000268.1 Genbank gene 3102 3149 . - . ID=gene-C9F09_03025;Name=C9F09_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03025 PYKB01000268.1 Protein Homology CDS 3102 3149 . - 0 ID=cds-TGD02060.1;Parent=gene-C9F09_03025;Dbxref=NCBI_GP:TGD02060.1;Name=TGD02060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457136.1;locus_tag=C9F09_03025;product=hypothetical protein;protein_id=TGD02060.1;transl_table=11 PYKB01000268.1 Genbank gene 3253 3591 . - . ID=gene-C9F09_03030;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=C9F09_03030 PYKB01000268.1 Protein Homology CDS 3253 3591 . - 0 ID=cds-TGD02055.1;Parent=gene-C9F09_03030;Dbxref=NCBI_GP:TGD02055.1;Name=TGD02055.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457135.1;locus_tag=C9F09_03030;product=ribosome-associated translation inhibitor RaiA;protein_id=TGD02055.1;transl_table=11 PYKB01000268.1 Genbank gene 3863 4600 . - . ID=gene-C9F09_03035;Name=C9F09_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03035 PYKB01000268.1 Protein Homology CDS 3863 4600 . - 0 ID=cds-TGD02056.1;Parent=gene-C9F09_03035;Dbxref=NCBI_GP:TGD02056.1;Name=TGD02056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=C9F09_03035;product=outer membrane protein assembly factor BamD;protein_id=TGD02056.1;transl_table=11 PYKB01000268.1 Genbank gene 4732 5712 . + . ID=gene-C9F09_03040;Name=C9F09_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03040 PYKB01000268.1 Protein Homology CDS 4732 5712 . + 0 ID=cds-TGD02057.1;Parent=gene-C9F09_03040;Dbxref=NCBI_GP:TGD02057.1;Name=TGD02057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=C9F09_03040;product=ribosomal large subunit pseudouridine synthase D;protein_id=TGD02057.1;transl_table=11 PYKB01000268.1 Genbank gene 5709 6440 . + . ID=gene-C9F09_03045;Name=C9F09_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03045 PYKB01000268.1 Protein Homology CDS 5709 6440 . + 0 ID=cds-TGD02058.1;Parent=gene-C9F09_03045;Dbxref=NCBI_GP:TGD02058.1;Name=TGD02058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457132.1;locus_tag=C9F09_03045;product=peptidoglycan editing factor PgeF;protein_id=TGD02058.1;transl_table=11 PYKB01000268.1 Genbank gene 6570 6981 . + . ID=gene-C9F09_03050;Name=C9F09_03050;end_range=6981,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03050;partial=true PYKB01000268.1 Protein Homology CDS 6570 6981 . + 0 ID=cds-TGD02059.1;Parent=gene-C9F09_03050;Dbxref=NCBI_GP:TGD02059.1;Name=TGD02059.1;end_range=6981,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=C9F09_03050;partial=true;product=hypothetical protein;protein_id=TGD02059.1;transl_table=11 ##sequence-region PYKB01001339.1 1 15064 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001339.1 Genbank region 1 15064 . + . ID=PYKB01001339.1:1..15064;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001339.1 Genbank pseudogene 26 268 . - . ID=gene-C9F09_23000;Name=C9F09_23000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23000;pseudo=true PYKB01001339.1 Protein Homology CDS 26 268 . - 0 ID=cds-C9F09_23000;Parent=gene-C9F09_23000;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455948.1;locus_tag=C9F09_23000;product=HyaD/HybD family hydrogenase maturation endopeptidase;pseudo=true;transl_table=11 PYKB01001339.1 Genbank gene 274 1017 . - . ID=gene-C9F09_23005;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=C9F09_23005 PYKB01001339.1 Protein Homology CDS 274 1017 . - 0 ID=cds-TGC80742.1;Parent=gene-C9F09_23005;Dbxref=NCBI_GP:TGC80742.1;Name=TGC80742.1;gbkey=CDS;gene=cybH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=C9F09_23005;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=TGC80742.1;transl_table=11 PYKB01001339.1 Genbank gene 968 2770 . - . ID=gene-C9F09_23010;Name=C9F09_23010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23010 PYKB01001339.1 Protein Homology CDS 968 2770 . - 0 ID=cds-TGC80743.1;Parent=gene-C9F09_23010;Dbxref=NCBI_GP:TGC80743.1;Name=TGC80743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=C9F09_23010;product=hydrogenase 2 large subunit;protein_id=TGC80743.1;transl_table=11 PYKB01001339.1 Genbank gene 2773 3876 . - . ID=gene-C9F09_23015;Name=C9F09_23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23015 PYKB01001339.1 Protein Homology CDS 2773 3876 . - 0 ID=cds-TGC80744.1;Parent=gene-C9F09_23015;Dbxref=NCBI_GP:TGC80744.1;Name=TGC80744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=C9F09_23015;product=uptake hydrogenase small subunit;protein_id=TGC80744.1;transl_table=11 PYKB01001339.1 Genbank gene 4305 5396 . + . ID=gene-C9F09_23020;Name=C9F09_23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23020 PYKB01001339.1 Protein Homology CDS 4305 5396 . + 0 ID=cds-TGC80745.1;Parent=gene-C9F09_23020;Dbxref=NCBI_GP:TGC80745.1;Name=TGC80745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455945.1;locus_tag=C9F09_23020;product=linear amide C-N hydrolase;protein_id=TGC80745.1;transl_table=11 PYKB01001339.1 Genbank gene 5442 6233 . + . ID=gene-C9F09_23025;Name=C9F09_23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23025 PYKB01001339.1 Protein Homology CDS 5442 6233 . + 0 ID=cds-TGC80746.1;Parent=gene-C9F09_23025;Dbxref=NCBI_GP:TGC80746.1;Name=TGC80746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455944.1;locus_tag=C9F09_23025;product=FadR family transcriptional regulator;protein_id=TGC80746.1;transl_table=11 PYKB01001339.1 Genbank pseudogene 6292 7317 . - . ID=gene-C9F09_23030;Name=C9F09_23030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23030;pseudo=true PYKB01001339.1 Protein Homology CDS 6292 7317 . - 0 ID=cds-C9F09_23030;Parent=gene-C9F09_23030;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=C9F09_23030;product=alcohol dehydrogenase;pseudo=true;transl_table=11 PYKB01001339.1 Genbank gene 7292 8578 . - . ID=gene-C9F09_23035;Name=C9F09_23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23035 PYKB01001339.1 Protein Homology CDS 7292 8578 . - 0 ID=cds-TGC80747.1;Parent=gene-C9F09_23035;Dbxref=NCBI_GP:TGC80747.1;Name=TGC80747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=C9F09_23035;product=MFS transporter;protein_id=TGC80747.1;transl_table=11 PYKB01001339.1 Genbank gene 8755 10311 . - . ID=gene-C9F09_23040;Name=C9F09_23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23040 PYKB01001339.1 Protein Homology CDS 8755 10311 . - 0 ID=cds-TGC80748.1;Parent=gene-C9F09_23040;Dbxref=NCBI_GP:TGC80748.1;Name=TGC80748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=C9F09_23040;product=PhoPQ-regulated protein;protein_id=TGC80748.1;transl_table=11 PYKB01001339.1 Genbank gene 10381 11622 . - . ID=gene-C9F09_23045;Name=C9F09_23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23045 PYKB01001339.1 Protein Homology CDS 10381 11622 . - 0 ID=cds-TGC80749.1;Parent=gene-C9F09_23045;Dbxref=NCBI_GP:TGC80749.1;Name=TGC80749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455940.1;locus_tag=C9F09_23045;product=MFS transporter;protein_id=TGC80749.1;transl_table=11 PYKB01001339.1 Genbank gene 11612 13120 . - . ID=gene-C9F09_23050;Name=C9F09_23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23050 PYKB01001339.1 Protein Homology CDS 11612 13120 . - 0 ID=cds-TGC80750.1;Parent=gene-C9F09_23050;Dbxref=NCBI_GP:TGC80750.1;Name=TGC80750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=C9F09_23050;product=hypothetical protein;protein_id=TGC80750.1;transl_table=11 PYKB01001339.1 Genbank gene 13165 13653 . + . ID=gene-C9F09_23055;Name=C9F09_23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23055 PYKB01001339.1 Protein Homology CDS 13165 13653 . + 0 ID=cds-TGC80751.1;Parent=gene-C9F09_23055;Dbxref=NCBI_GP:TGC80751.1;Name=TGC80751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455939.1;locus_tag=C9F09_23055;product=MarR family transcriptional regulator;protein_id=TGC80751.1;transl_table=11 PYKB01001339.1 Genbank gene 13846 14925 . + . ID=gene-C9F09_23060;Name=C9F09_23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23060 PYKB01001339.1 Protein Homology CDS 13846 14925 . + 0 ID=cds-TGC80752.1;Parent=gene-C9F09_23060;Dbxref=NCBI_GP:TGC80752.1;Name=TGC80752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455938.1;locus_tag=C9F09_23060;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=TGC80752.1;transl_table=11 PYKB01001339.1 Genbank gene 14973 15064 . - . ID=gene-C9F09_23065;Name=C9F09_23065;end_range=15064,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23065;partial=true PYKB01001339.1 Protein Homology CDS 14973 15064 . - 2 ID=cds-TGC80753.1;Parent=gene-C9F09_23065;Dbxref=NCBI_GP:TGC80753.1;Name=TGC80753.1;end_range=15064,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460509.1;locus_tag=C9F09_23065;partial=true;product=endoribonuclease L-PSP;protein_id=TGC80753.1;transl_table=11 ##sequence-region PYKB01001273.1 1 529 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001273.1 Genbank region 1 529 . + . ID=PYKB01001273.1:1..529;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001273.1 Genbank gene 1 529 . - . ID=gene-C9F09_21765;Name=C9F09_21765;end_range=529,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21765;partial=true;start_range=.,1 PYKB01001273.1 Protein Homology CDS 1 529 . - 2 ID=cds-TGC82195.1;Parent=gene-C9F09_21765;Dbxref=NCBI_GP:TGC82195.1;Name=TGC82195.1;end_range=529,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044775.1;locus_tag=C9F09_21765;partial=true;product=hypothetical protein;protein_id=TGC82195.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000964.1 1 529 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000964.1 Genbank region 1 529 . + . ID=PYKB01000964.1:1..529;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000964.1 Genbank gene 1 529 . - . ID=gene-C9F09_15965;Name=C9F09_15965;end_range=529,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15965;partial=true;start_range=.,1 PYKB01000964.1 Protein Homology CDS 1 529 . - 1 ID=cds-TGC89014.1;Parent=gene-C9F09_15965;Dbxref=NCBI_GP:TGC89014.1;Name=TGC89014.1;Note=catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis;end_range=529,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312944.1;locus_tag=C9F09_15965;partial=true;product=phosphomethylpyrimidine synthase ThiC;protein_id=TGC89014.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000290.1 1 527 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000290.1 Genbank region 1 527 . + . ID=PYKB01000290.1:1..527;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000290.1 Genbank gene 1 527 . + . ID=gene-C9F09_03325;Name=sipB;end_range=527,.;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=C9F09_03325;partial=true;start_range=.,1 PYKB01000290.1 Protein Homology CDS 1 527 . + 1 ID=cds-TGD01592.1;Parent=gene-C9F09_03325;Dbxref=NCBI_GP:TGD01592.1;Name=TGD01592.1;end_range=527,.;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457279.1;locus_tag=C9F09_03325;partial=true;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=TGD01592.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000236.1 1 527 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000236.1 Genbank region 1 527 . + . ID=PYKB01000236.1:1..527;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000236.1 Genbank pseudogene 62 527 . + . ID=gene-C9F09_02570;Name=C9F09_02570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02570;pseudo=true PYKB01000236.1 Protein Homology CDS 62 527 . + 0 ID=cds-C9F09_02570;Parent=gene-C9F09_02570;Note=catalyzes the oxidation of formate to carbon dioxide and molecular hydrogen%3B formate hydrogenlyase comprises of a formate dehydrogenase%2C unidentified electron carriers and a hydrogenase (subunit 3)%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=C9F09_02570;product=formate hydrogenlyase subunit 3;pseudo=true;transl_table=11 ##sequence-region PYKB01000304.1 1 525 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000304.1 Genbank region 1 525 . + . ID=PYKB01000304.1:1..525;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000304.1 Genbank gene 1 134 . + . ID=gene-C9F09_03425;Name=C9F09_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03425;partial=true;start_range=.,1 PYKB01000304.1 Protein Homology CDS 1 134 . + 2 ID=cds-TGD01434.1;Parent=gene-C9F09_03425;Dbxref=NCBI_GP:TGD01434.1;Name=TGD01434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=C9F09_03425;partial=true;product=virulence factor;protein_id=TGD01434.1;start_range=.,1;transl_table=11 PYKB01000304.1 Genbank gene 266 478 . + . ID=gene-C9F09_03430;Name=C9F09_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03430 PYKB01000304.1 Protein Homology CDS 266 478 . + 0 ID=cds-TGD01435.1;Parent=gene-C9F09_03430;Dbxref=NCBI_GP:TGD01435.1;Name=TGD01435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456272.1;locus_tag=C9F09_03430;product=cold-shock protein;protein_id=TGD01435.1;transl_table=11 ##sequence-region PYKB01000562.1 1 524 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000562.1 Genbank region 1 524 . + . ID=PYKB01000562.1:1..524;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000562.1 Genbank pseudogene 1 498 . + . ID=gene-C9F09_07805;Name=C9F09_07805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07805;pseudo=true PYKB01000562.1 Protein Homology CDS 1 498 . + 0 ID=cds-C9F09_07805;Parent=gene-C9F09_07805;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014599107.1;locus_tag=C9F09_07805;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKB01000079.1 1 521 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000079.1 Genbank region 1 521 . + . ID=PYKB01000079.1:1..521;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000079.1 Genbank pseudogene 35 521 . - . ID=gene-C9F09_00945;Name=C9F09_00945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00945;pseudo=true PYKB01000079.1 Protein Homology CDS 35 521 . - 1 ID=cds-C9F09_00945;Parent=gene-C9F09_00945;Note=LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=C9F09_00945;product=branched-chain amino acid ABC transporter permease LivH;pseudo=true;transl_table=11 ##sequence-region PYKB01000559.1 1 521 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000559.1 Genbank region 1 521 . + . ID=PYKB01000559.1:1..521;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000559.1 Genbank pseudogene 1 521 . - . ID=gene-C9F09_07740;Name=C9F09_07740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07740;pseudo=true PYKB01000559.1 Protein Homology CDS 1 521 . - 0 ID=cds-C9F09_07740;Parent=gene-C9F09_07740;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457593.1;locus_tag=C9F09_07740;product=inorganic triphosphatase;pseudo=true;transl_table=11 ##sequence-region PYKB01000756.1 1 520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000756.1 Genbank region 1 520 . + . ID=PYKB01000756.1:1..520;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000756.1 Genbank pseudogene 38 520 . - . ID=gene-C9F09_11690;Name=C9F09_11690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11690;pseudo=true PYKB01000756.1 Protein Homology CDS 38 520 . - 0 ID=cds-C9F09_11690;Parent=gene-C9F09_11690;Note=regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456810.1;locus_tag=C9F09_11690;product=bifunctional transcriptional activator/DNA repair enzyme protein Ada;pseudo=true;transl_table=11 ##sequence-region PYKB01001093.1 1 494 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001093.1 Genbank region 1 494 . + . ID=PYKB01001093.1:1..494;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001093.1 Genbank pseudogene 1 291 . + . ID=gene-C9F09_18325;Name=C9F09_18325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18325;pseudo=true PYKB01001093.1 Protein Homology CDS 1 291 . + 0 ID=cds-C9F09_18325;Parent=gene-C9F09_18325;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462422.1;locus_tag=C9F09_18325;product=RNA-splicing ligase RtcB;pseudo=true;transl_table=11 PYKB01001093.1 Genbank gene 295 494 . + . ID=gene-C9F09_18330;Name=C9F09_18330;end_range=494,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18330;partial=true PYKB01001093.1 Protein Homology CDS 295 494 . + 0 ID=cds-TGC86206.1;Parent=gene-C9F09_18330;Dbxref=NCBI_GP:TGC86206.1;Name=TGC86206.1;Note=catalyzes the conversion of terminal3'-phosphate of RNA to the 2'%2C3'-cyclicphosphodiester;end_range=494,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462421.1;locus_tag=C9F09_18330;partial=true;product=RNA 3'-terminal phosphate cyclase;protein_id=TGC86206.1;transl_table=11 ##sequence-region PYKB01001027.1 1 6960 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001027.1 Genbank region 1 6960 . + . ID=PYKB01001027.1:1..6960;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001027.1 Genbank gene 118 1356 . + . ID=gene-C9F09_17155;Name=C9F09_17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17155 PYKB01001027.1 Protein Homology CDS 118 1356 . + 0 ID=cds-TGC87648.1;Parent=gene-C9F09_17155;Dbxref=NCBI_GP:TGC87648.1;Name=TGC87648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=C9F09_17155;product=alanine transaminase;protein_id=TGC87648.1;transl_table=11 PYKB01001027.1 Genbank gene 1406 1477 . - . ID=gene-C9F09_17160;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=C9F09_17160 PYKB01001027.1 Protein Homology CDS 1406 1477 . - 0 ID=cds-TGC87652.1;Parent=gene-C9F09_17160;Dbxref=NCBI_GP:TGC87652.1;Name=TGC87652.1;gbkey=CDS;gene=ypdK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=C9F09_17160;product=membrane protein YpdK;protein_id=TGC87652.1;transl_table=11 PYKB01001027.1 Genbank gene 1880 2800 . - . ID=gene-C9F09_17165;Name=C9F09_17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17165 PYKB01001027.1 Protein Homology CDS 1880 2800 . - 0 ID=cds-TGC87649.1;Parent=gene-C9F09_17165;Dbxref=NCBI_GP:TGC87649.1;Name=TGC87649.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456943.1;locus_tag=C9F09_17165;product=lipid A biosynthesis palmitoleoyl acyltransferase;protein_id=TGC87649.1;transl_table=11 PYKB01001027.1 Genbank gene 3322 3564 . + . ID=gene-C9F09_17170;Name=C9F09_17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17170 PYKB01001027.1 Protein Homology CDS 3322 3564 . + 0 ID=cds-TGC87650.1;Parent=gene-C9F09_17170;Dbxref=NCBI_GP:TGC87650.1;Name=TGC87650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456942.1;locus_tag=C9F09_17170;product=DUF2545 domain-containing protein;protein_id=TGC87650.1;transl_table=11 PYKB01001027.1 Genbank gene 3840 5231 . - . ID=gene-C9F09_17175;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=C9F09_17175 PYKB01001027.1 Protein Homology CDS 3840 5231 . - 0 ID=cds-TGC87651.1;Parent=gene-C9F09_17175;Dbxref=NCBI_GP:TGC87651.1;Name=TGC87651.1;gbkey=CDS;gene=pgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456941.1;locus_tag=C9F09_17175;product=phosphoglycerate transporter PgtP;protein_id=TGC87651.1;transl_table=11 PYKB01001027.1 Genbank pseudogene 5405 5620 . + . ID=gene-C9F09_17180;Name=C9F09_17180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17180;pseudo=true PYKB01001027.1 Protein Homology CDS 5405 5620 . + 0 ID=cds-C9F09_17180;Parent=gene-C9F09_17180;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001650260.1;locus_tag=C9F09_17180;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001027.1 Genbank gene 5667 6860 . + . ID=gene-C9F09_17185;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=C9F09_17185 PYKB01001027.1 Protein Homology CDS 5667 6860 . + 0 ID=cds-TGC87653.1;Parent=gene-C9F09_17185;Dbxref=NCBI_GP:TGC87653.1;Name=TGC87653.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456940.1;locus_tag=C9F09_17185;product=phosphoglycerate transport regulator PgtC;protein_id=TGC87653.1;transl_table=11 ##sequence-region PYKB01000248.1 1 516 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000248.1 Genbank region 1 516 . + . ID=PYKB01000248.1:1..516;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000248.1 Genbank gene 1 495 . + . ID=gene-C9F09_02715;Name=C9F09_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02715;partial=true;start_range=.,1 PYKB01000248.1 Protein Homology CDS 1 495 . + 0 ID=cds-TGD02593.1;Parent=gene-C9F09_02715;Dbxref=NCBI_GP:TGD02593.1;Name=TGD02593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=C9F09_02715;partial=true;product=Sec-independent protein translocase protein TatB;protein_id=TGD02593.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001056.1 1 513 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001056.1 Genbank region 1 513 . + . ID=PYKB01001056.1:1..513;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001056.1 Genbank gene 1 513 . + . ID=gene-C9F09_17715;Name=C9F09_17715;end_range=513,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17715;partial=true;start_range=.,1 PYKB01001056.1 Protein Homology CDS 1 513 . + 2 ID=cds-TGC87021.1;Parent=gene-C9F09_17715;Dbxref=NCBI_GP:TGC87021.1;Name=TGC87021.1;end_range=513,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458567.1;locus_tag=C9F09_17715;partial=true;product=Na+/H+ antiporter;protein_id=TGC87021.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000340.1 1 512 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000340.1 Genbank region 1 512 . + . ID=PYKB01000340.1:1..512;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000340.1 Genbank gene 1 512 . - . ID=gene-C9F09_03775;Name=C9F09_03775;end_range=512,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03775;partial=true;start_range=.,1 PYKB01000340.1 Protein Homology CDS 1 512 . - 1 ID=cds-TGD00754.1;Parent=gene-C9F09_03775;Dbxref=NCBI_GP:TGD00754.1;Name=TGD00754.1;Note=protein p43%3B inner membrane protein that exports enterobactin to the periplasmic space%3B member of the major facilitator superfamily (MFS) of transporters;end_range=512,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=C9F09_03775;partial=true;product=MFS transporter;protein_id=TGD00754.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001222.1 1 511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001222.1 Genbank region 1 511 . + . ID=PYKB01001222.1:1..511;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001222.1 Genbank gene 1 511 . + . ID=gene-C9F09_20725;Name=cysG;end_range=511,.;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=C9F09_20725;partial=true;start_range=.,1 PYKB01001222.1 Protein Homology CDS 1 511 . + 2 ID=cds-TGC83033.1;Parent=gene-C9F09_20725;Dbxref=NCBI_GP:TGC83033.1;Name=TGC83033.1;Note=multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin;end_range=511,.;gbkey=CDS;gene=cysG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=C9F09_20725;partial=true;product=siroheme synthase;protein_id=TGC83033.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000419.1 1 511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000419.1 Genbank region 1 511 . + . ID=PYKB01000419.1:1..511;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000419.1 Genbank gene 1 511 . - . ID=gene-C9F09_04820;Name=C9F09_04820;end_range=511,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04820;partial=true;start_range=.,1 PYKB01000419.1 Protein Homology CDS 1 511 . - 0 ID=cds-TGC99269.1;Parent=gene-C9F09_04820;Dbxref=NCBI_GP:TGC99269.1;Name=TGC99269.1;Note=constitutive%3B catalyzes the formation of cadaverine from lysine;end_range=511,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=C9F09_04820;partial=true;product=lysine decarboxylase LdcC;protein_id=TGC99269.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000002.1 1 510 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000002.1 Genbank region 1 510 . + . ID=PYKB01000002.1:1..510;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000002.1 Genbank pseudogene 152 496 . - . ID=gene-C9F09_00010;Name=C9F09_00010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00010;pseudo=true PYKB01000002.1 Protein Homology CDS 152 496 . - 0 ID=cds-C9F09_00010;Parent=gene-C9F09_00010;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192753.1;locus_tag=C9F09_00010;product=restriction endonuclease subunit M;pseudo=true;transl_table=11 ##sequence-region PYKB01001291.1 1 509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001291.1 Genbank region 1 509 . + . ID=PYKB01001291.1:1..509;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001291.1 Genbank gene 42 509 . + . ID=gene-C9F09_22055;Name=C9F09_22055;end_range=509,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22055;partial=true PYKB01001291.1 Protein Homology CDS 42 509 . + 0 ID=cds-TGC81795.1;Parent=gene-C9F09_22055;Dbxref=NCBI_GP:TGC81795.1;Name=TGC81795.1;end_range=509,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454965.1;locus_tag=C9F09_22055;partial=true;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=TGC81795.1;transl_table=11 ##sequence-region PYKB01001645.1 1 506 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001645.1 Genbank region 1 506 . + . ID=PYKB01001645.1:1..506;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001645.1 Genbank gene 1 506 . + . ID=gene-C9F09_28725;Name=C9F09_28725;end_range=506,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28725;partial=true;start_range=.,1 PYKB01001645.1 Protein Homology CDS 1 506 . + 0 ID=cds-TGC73684.1;Parent=gene-C9F09_28725;Dbxref=NCBI_GP:TGC73684.1;Name=TGC73684.1;end_range=506,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456226.1;locus_tag=C9F09_28725;partial=true;product=PrkA family serine protein kinase;protein_id=TGC73684.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001284.1 1 6952 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001284.1 Genbank region 1 6952 . + . ID=PYKB01001284.1:1..6952;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001284.1 Genbank gene 1 813 . + . ID=gene-C9F09_21965;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=C9F09_21965;partial=true;start_range=.,1 PYKB01001284.1 Protein Homology CDS 1 813 . + 0 ID=cds-TGC81926.1;Parent=gene-C9F09_21965;Dbxref=NCBI_GP:TGC81926.1;Name=TGC81926.1;gbkey=CDS;gene=pyk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=C9F09_21965;partial=true;product=pyruvate kinase;protein_id=TGC81926.1;start_range=.,1;transl_table=11 PYKB01001284.1 Genbank gene 1124 1360 . + . ID=gene-C9F09_21970;Name=C9F09_21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21970 PYKB01001284.1 Protein Homology CDS 1124 1360 . + 0 ID=cds-TGC81927.1;Parent=gene-C9F09_21970;Dbxref=NCBI_GP:TGC81927.1;Name=TGC81927.1;Note=major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006675846.1;locus_tag=C9F09_21970;product=murein lipoprotein;protein_id=TGC81927.1;transl_table=11 PYKB01001284.1 Genbank gene 1443 1682 . + . ID=gene-C9F09_21975;Name=C9F09_21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21975 PYKB01001284.1 Protein Homology CDS 1443 1682 . + 0 ID=cds-TGC81928.1;Parent=gene-C9F09_21975;Dbxref=NCBI_GP:TGC81928.1;Name=TGC81928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460341.1;locus_tag=C9F09_21975;product=hypothetical protein;protein_id=TGC81928.1;transl_table=11 PYKB01001284.1 Genbank gene 1749 2750 . - . ID=gene-C9F09_21980;Name=C9F09_21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21980 PYKB01001284.1 Protein Homology CDS 1749 2750 . - 0 ID=cds-TGC81929.1;Parent=gene-C9F09_21980;Dbxref=NCBI_GP:TGC81929.1;Name=TGC81929.1;Note=catalyzes the formation of a meso-diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link in peptidoglycan synthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=C9F09_21980;product=murein L%2CD-transpeptidase;protein_id=TGC81929.1;transl_table=11 PYKB01001284.1 Genbank gene 2905 3321 . - . ID=gene-C9F09_21985;Name=C9F09_21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21985 PYKB01001284.1 Protein Homology CDS 2905 3321 . - 0 ID=cds-TGC81930.1;Parent=gene-C9F09_21985;Dbxref=NCBI_GP:TGC81930.1;Name=TGC81930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456150.1;locus_tag=C9F09_21985;product=cysteine desulfuration protein SufE;protein_id=TGC81930.1;transl_table=11 PYKB01001284.1 Genbank gene 3334 4554 . - . ID=gene-C9F09_21990;Name=C9F09_21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21990 PYKB01001284.1 Protein Homology CDS 3334 4554 . - 0 ID=cds-TGC81931.1;Parent=gene-C9F09_21990;Dbxref=NCBI_GP:TGC81931.1;Name=TGC81931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456151.1;locus_tag=C9F09_21990;product=cysteine desulfurase;protein_id=TGC81931.1;transl_table=11 PYKB01001284.1 Genbank gene 4551 5822 . - . ID=gene-C9F09_21995;Name=C9F09_21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21995 PYKB01001284.1 Protein Homology CDS 4551 5822 . - 0 ID=cds-TGC81932.1;Parent=gene-C9F09_21995;Dbxref=NCBI_GP:TGC81932.1;Name=TGC81932.1;Note=with SufBC activates cysteine desulfurase SufS;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=C9F09_21995;product=signal peptide peptidase SppA;protein_id=TGC81932.1;transl_table=11 PYKB01001284.1 Genbank gene 5797 6543 . - . ID=gene-C9F09_22000;Name=C9F09_22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22000 PYKB01001284.1 Protein Homology CDS 5797 6543 . - 0 ID=cds-TGC81933.1;Parent=gene-C9F09_22000;Dbxref=NCBI_GP:TGC81933.1;Name=TGC81933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460336.1;locus_tag=C9F09_22000;product=Fe-S cluster assembly ATPase SufC;protein_id=TGC81933.1;transl_table=11 PYKB01001284.1 Genbank gene 6560 6952 . - . ID=gene-C9F09_22005;Name=C9F09_22005;end_range=6952,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22005;partial=true PYKB01001284.1 Protein Homology CDS 6560 6952 . - 0 ID=cds-TGC81934.1;Parent=gene-C9F09_22005;Dbxref=NCBI_GP:TGC81934.1;Name=TGC81934.1;Note=with SufCD activates cysteine desulfurase SufS;end_range=6952,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=C9F09_22005;partial=true;product=Fe-S cluster assembly protein SufB;protein_id=TGC81934.1;transl_table=11 ##sequence-region PYKB01001261.1 1 505 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001261.1 Genbank region 1 505 . + . ID=PYKB01001261.1:1..505;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001261.1 Genbank gene 1 505 . + . ID=gene-C9F09_21550;Name=C9F09_21550;end_range=505,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21550;partial=true;start_range=.,1 PYKB01001261.1 Protein Homology CDS 1 505 . + 0 ID=cds-TGC82281.1;Parent=gene-C9F09_21550;Dbxref=NCBI_GP:TGC82281.1;Name=TGC82281.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;end_range=505,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000069371.1;locus_tag=C9F09_21550;partial=true;product=phosphoenolpyruvate synthase;protein_id=TGC82281.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001361.1 1 505 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001361.1 Genbank region 1 505 . + . ID=PYKB01001361.1:1..505;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001361.1 Genbank gene 1 505 . + . ID=gene-C9F09_23375;Name=nadC;end_range=505,.;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=C9F09_23375;partial=true;start_range=.,1 PYKB01001361.1 Protein Homology CDS 1 505 . + 0 ID=cds-TGC80310.1;Parent=gene-C9F09_23375;Dbxref=NCBI_GP:TGC80310.1;Name=TGC80310.1;end_range=505,.;gbkey=CDS;gene=nadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459150.1;locus_tag=C9F09_23375;partial=true;product=nicotinate-nucleotide diphosphorylase (carboxylating);protein_id=TGC80310.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000801.1 1 504 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000801.1 Genbank region 1 504 . + . ID=PYKB01000801.1:1..504;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000801.1 Genbank gene 261 504 . + . ID=gene-C9F09_12465;Name=C9F09_12465;end_range=504,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12465;partial=true PYKB01000801.1 Protein Homology CDS 261 504 . + 0 ID=cds-TGC92160.1;Parent=gene-C9F09_12465;Dbxref=NCBI_GP:TGC92160.1;Name=TGC92160.1;Note=regulates the tdcABCDEFG operon which is involved in amino acid degradation;end_range=504,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457632.1;locus_tag=C9F09_12465;partial=true;product=transcriptional regulator TdcA;protein_id=TGC92160.1;transl_table=11 ##sequence-region PYKB01000251.1 1 503 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000251.1 Genbank region 1 503 . + . ID=PYKB01000251.1:1..503;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000251.1 Genbank gene 103 179 . + . ID=gene-C9F09_02745;Name=C9F09_02745;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_02745 PYKB01000251.1 tRNAscan-SE tRNA 103 179 . + . ID=rna-C9F09_02745;Parent=gene-C9F09_02745;anticodon=(pos:137..139);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_02745;product=tRNA-Ile PYKB01000251.1 tRNAscan-SE exon 103 179 . + . ID=exon-C9F09_02745-1;Parent=rna-C9F09_02745;anticodon=(pos:137..139);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_02745;product=tRNA-Ile PYKB01000251.1 Genbank gene 291 366 . + . ID=gene-C9F09_02750;Name=C9F09_02750;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_02750 PYKB01000251.1 tRNAscan-SE tRNA 291 366 . + . ID=rna-C9F09_02750;Parent=gene-C9F09_02750;anticodon=(pos:324..326);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_02750;product=tRNA-Ala PYKB01000251.1 tRNAscan-SE exon 291 366 . + . ID=exon-C9F09_02750-1;Parent=rna-C9F09_02750;anticodon=(pos:324..326);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_02750;product=tRNA-Ala ##sequence-region PYKB01001219.1 1 503 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001219.1 Genbank region 1 503 . + . ID=PYKB01001219.1:1..503;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001219.1 Genbank pseudogene 1 503 . - . ID=gene-C9F09_20710;Name=C9F09_20710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_20710;pseudo=true PYKB01001219.1 Protein Homology CDS 1 503 . - 2 ID=cds-C9F09_20710;Parent=gene-C9F09_20710;Note=catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455332.1;locus_tag=C9F09_20710;product=urocanate hydratase;pseudo=true;transl_table=11 ##sequence-region PYKB01000279.1 1 502 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000279.1 Genbank region 1 502 . + . ID=PYKB01000279.1:1..502;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000279.1 Genbank gene 45 502 . + . ID=gene-C9F09_03175;Name=eutA;end_range=502,.;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=C9F09_03175;partial=true PYKB01000279.1 Protein Homology CDS 45 502 . + 0 ID=cds-TGD01793.1;Parent=gene-C9F09_03175;Dbxref=NCBI_GP:TGD01793.1;Name=TGD01793.1;Note=ethanolamine utilization protein EutA;end_range=502,.;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456994.1;locus_tag=C9F09_03175;partial=true;product=ethanolamine utilization protein EutA;protein_id=TGD01793.1;transl_table=11 ##sequence-region PYKB01000198.1 1 501 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000198.1 Genbank region 1 501 . + . ID=PYKB01000198.1:1..501;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000198.1 Genbank gene 1 501 . - . ID=gene-C9F09_02185;Name=C9F09_02185;end_range=501,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02185;partial=true;start_range=.,1 PYKB01000198.1 Protein Homology CDS 1 501 . - 1 ID=cds-TGD03725.1;Parent=gene-C9F09_02185;Dbxref=NCBI_GP:TGD03725.1;Name=TGD03725.1;end_range=501,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456881.1;locus_tag=C9F09_02185;partial=true;product=basic amino acid antiporter;protein_id=TGD03725.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000435.1 1 501 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000435.1 Genbank region 1 501 . + . ID=PYKB01000435.1:1..501;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000435.1 Genbank gene 1 255 . + . ID=gene-C9F09_05235;Name=C9F09_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05235;partial=true;start_range=.,1 PYKB01000435.1 Protein Homology CDS 1 255 . + 0 ID=cds-TGC98890.1;Parent=gene-C9F09_05235;Dbxref=NCBI_GP:TGC98890.1;Name=TGC98890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411636.1;locus_tag=C9F09_05235;partial=true;product=phage holin%2C lambda family;protein_id=TGC98890.1;start_range=.,1;transl_table=11 PYKB01000435.1 Genbank gene 259 501 . + . ID=gene-C9F09_05240;Name=C9F09_05240;end_range=501,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05240;partial=true PYKB01000435.1 Protein Homology CDS 259 501 . + 0 ID=cds-TGC98891.1;Parent=gene-C9F09_05240;Dbxref=NCBI_GP:TGC98891.1;Name=TGC98891.1;end_range=501,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456404.1;locus_tag=C9F09_05240;partial=true;product=lysozyme;protein_id=TGC98891.1;transl_table=11 ##sequence-region PYKB01001559.1 1 497 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001559.1 Genbank region 1 497 . + . ID=PYKB01001559.1:1..497;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001559.1 Genbank gene 1 497 . + . ID=gene-C9F09_27235;Name=C9F09_27235;end_range=497,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27235;partial=true;start_range=.,1 PYKB01001559.1 Protein Homology CDS 1 497 . + 0 ID=cds-TGC75836.1;Parent=gene-C9F09_27235;Dbxref=NCBI_GP:TGC75836.1;Name=TGC75836.1;end_range=497,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458404.1;locus_tag=C9F09_27235;partial=true;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=TGC75836.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001329.1 1 496 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001329.1 Genbank region 1 496 . + . ID=PYKB01001329.1:1..496;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001329.1 Genbank gene 100 496 . + . ID=gene-C9F09_22830;Name=C9F09_22830;end_range=496,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22830;partial=true PYKB01001329.1 Protein Homology CDS 100 496 . + 0 ID=cds-TGC80950.1;Parent=gene-C9F09_22830;Dbxref=NCBI_GP:TGC80950.1;Name=TGC80950.1;end_range=496,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457158.1;locus_tag=C9F09_22830;partial=true;product=large repetitive protein;protein_id=TGC80950.1;transl_table=11 ##sequence-region PYKB01001009.1 1 6951 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001009.1 Genbank region 1 6951 . + . ID=PYKB01001009.1:1..6951;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001009.1 Genbank gene 1 793 . - . ID=gene-C9F09_16825;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=C9F09_16825;partial=true;start_range=.,1 PYKB01001009.1 Protein Homology CDS 1 793 . - 0 ID=cds-TGC88022.1;Parent=gene-C9F09_16825;Dbxref=NCBI_GP:TGC88022.1;Name=TGC88022.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=C9F09_16825;partial=true;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=TGC88022.1;start_range=.,1;transl_table=11 PYKB01001009.1 Genbank gene 759 1433 . - . ID=gene-C9F09_16830;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=C9F09_16830 PYKB01001009.1 Protein Homology CDS 759 1433 . - 0 ID=cds-TGC88012.1;Parent=gene-C9F09_16830;Dbxref=NCBI_GP:TGC88012.1;Name=TGC88012.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=C9F09_16830;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=TGC88012.1;transl_table=11 PYKB01001009.1 Genbank gene 1430 1978 . - . ID=gene-C9F09_16835;Name=C9F09_16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16835 PYKB01001009.1 Protein Homology CDS 1430 1978 . - 0 ID=cds-TGC88023.1;Parent=gene-C9F09_16835;Dbxref=NCBI_GP:TGC88023.1;Name=TGC88023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=C9F09_16835;product=cytoplasmic protein;protein_id=TGC88023.1;transl_table=11 PYKB01001009.1 Genbank gene 1996 2745 . - . ID=gene-C9F09_16840;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=C9F09_16840 PYKB01001009.1 Protein Homology CDS 1996 2745 . - 0 ID=cds-TGC88013.1;Parent=gene-C9F09_16840;Dbxref=NCBI_GP:TGC88013.1;Name=TGC88013.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456119.1;locus_tag=C9F09_16840;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=TGC88013.1;transl_table=11 PYKB01001009.1 Genbank gene 2742 2990 . - . ID=gene-C9F09_16845;Name=C9F09_16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16845 PYKB01001009.1 Protein Homology CDS 2742 2990 . - 0 ID=cds-TGC88024.1;Parent=gene-C9F09_16845;Dbxref=NCBI_GP:TGC88024.1;Name=TGC88024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456120.1;locus_tag=C9F09_16845;product=EscI/YscI/HrpB family type III secretion system inner rod protein;protein_id=TGC88024.1;transl_table=11 PYKB01001009.1 Genbank gene 3002 3292 . - . ID=gene-C9F09_16850;Name=C9F09_16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16850 PYKB01001009.1 Protein Homology CDS 3002 3292 . - 0 ID=cds-TGC88014.1;Parent=gene-C9F09_16850;Dbxref=NCBI_GP:TGC88014.1;Name=TGC88014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=C9F09_16850;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=TGC88014.1;transl_table=11 PYKB01001009.1 Genbank gene 3270 3485 . - . ID=gene-C9F09_16855;Name=C9F09_16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16855 PYKB01001009.1 Protein Homology CDS 3270 3485 . - 0 ID=cds-TGC88015.1;Parent=gene-C9F09_16855;Dbxref=NCBI_GP:TGC88015.1;Name=TGC88015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456122.1;locus_tag=C9F09_16855;product=EscF/YscF/HrpA family type III secretion system needle major subunit;protein_id=TGC88015.1;transl_table=11 PYKB01001009.1 Genbank gene 3579 4268 . - . ID=gene-C9F09_16860;Name=C9F09_16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16860 PYKB01001009.1 Protein Homology CDS 3579 4268 . - 0 ID=cds-TGC88016.1;Parent=gene-C9F09_16860;Dbxref=NCBI_GP:TGC88016.1;Name=TGC88016.1;Note=with SseF is involved in the aggregation of the host endosomes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=C9F09_16860;product=pathogenicity island 2 effector protein SseG;protein_id=TGC88016.1;transl_table=11 PYKB01001009.1 Genbank gene 4265 5047 . - . ID=gene-C9F09_16865;Name=C9F09_16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16865 PYKB01001009.1 Protein Homology CDS 4265 5047 . - 0 ID=cds-TGC88017.1;Parent=gene-C9F09_16865;Dbxref=NCBI_GP:TGC88017.1;Name=TGC88017.1;Note=with SseG is involved in the aggregation of the host endosomes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=C9F09_16865;product=pathogenicity island 2 effector protein SseF;protein_id=TGC88017.1;transl_table=11 PYKB01001009.1 Genbank gene 5063 5497 . - . ID=gene-C9F09_16870;Name=C9F09_16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16870 PYKB01001009.1 Protein Homology CDS 5063 5497 . - 0 ID=cds-TGC88018.1;Parent=gene-C9F09_16870;Dbxref=NCBI_GP:TGC88018.1;Name=TGC88018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=C9F09_16870;product=CesD/SycD/LcrH family type III secretion system chaperone;protein_id=TGC88018.1;transl_table=11 PYKB01001009.1 Genbank gene 5549 5965 . - . ID=gene-C9F09_16875;Name=C9F09_16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16875 PYKB01001009.1 Protein Homology CDS 5549 5965 . - 0 ID=cds-TGC88019.1;Parent=gene-C9F09_16875;Dbxref=NCBI_GP:TGC88019.1;Name=TGC88019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=C9F09_16875;product=pathogenicity island 2 effector protein SseE;protein_id=TGC88019.1;transl_table=11 PYKB01001009.1 Genbank gene 5968 6555 . - . ID=gene-C9F09_16880;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=C9F09_16880 PYKB01001009.1 Protein Homology CDS 5968 6555 . - 0 ID=cds-TGC88020.1;Parent=gene-C9F09_16880;Dbxref=NCBI_GP:TGC88020.1;Name=TGC88020.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=C9F09_16880;product=SPI-2 type III secretion system translocon protein SseD;protein_id=TGC88020.1;transl_table=11 PYKB01001009.1 Genbank gene 6571 6951 . - . ID=gene-C9F09_16885;Name=C9F09_16885;end_range=6951,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16885;partial=true PYKB01001009.1 Protein Homology CDS 6571 6951 . - 0 ID=cds-TGC88021.1;Parent=gene-C9F09_16885;Dbxref=NCBI_GP:TGC88021.1;Name=TGC88021.1;Note=may be involved in the translocation of effector proteins into the host cell;end_range=6951,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456128.1;locus_tag=C9F09_16885;partial=true;product=pathogenicity island 2 effector protein SseC;protein_id=TGC88021.1;transl_table=11 ##sequence-region PYKB01001594.1 1 494 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001594.1 Genbank region 1 494 . + . ID=PYKB01001594.1:1..494;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001594.1 Genbank gene 1 494 . + . ID=gene-C9F09_28055;Name=C9F09_28055;end_range=494,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28055;partial=true;start_range=.,1 PYKB01001594.1 Protein Homology CDS 1 494 . + 1 ID=cds-TGC74967.1;Parent=gene-C9F09_28055;Dbxref=NCBI_GP:TGC74967.1;Name=TGC74967.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;end_range=494,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456804.1;locus_tag=C9F09_28055;partial=true;product=periplasmic nitrate reductase subunit alpha;protein_id=TGC74967.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000494.1 1 493 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000494.1 Genbank region 1 493 . + . ID=PYKB01000494.1:1..493;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000494.1 Genbank gene 1 493 . - . ID=gene-C9F09_06230;Name=C9F09_06230;end_range=493,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06230;partial=true;start_range=.,1 PYKB01000494.1 Protein Homology CDS 1 493 . - 1 ID=cds-TGC97817.1;Parent=gene-C9F09_06230;Dbxref=NCBI_GP:TGC97817.1;Name=TGC97817.1;end_range=493,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457590.1;locus_tag=C9F09_06230;partial=true;product=flotillin;protein_id=TGC97817.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000780.1 1 492 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000780.1 Genbank region 1 492 . + . ID=PYKB01000780.1:1..492;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000780.1 Genbank gene 1 245 . - . ID=gene-C9F09_12065;Name=C9F09_12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12065;partial=true;start_range=.,1 PYKB01000780.1 Protein Homology CDS 1 245 . - 0 ID=cds-TGC92505.1;Parent=gene-C9F09_12065;Dbxref=NCBI_GP:TGC92505.1;Name=TGC92505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456193.1;locus_tag=C9F09_12065;partial=true;product=catalase;protein_id=TGC92505.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000270.1 1 491 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000270.1 Genbank region 1 491 . + . ID=PYKB01000270.1:1..491;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000270.1 Genbank gene 1 491 . - . ID=gene-C9F09_03060;Name=C9F09_03060;end_range=491,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03060;partial=true;start_range=.,1 PYKB01000270.1 Protein Homology CDS 1 491 . - 0 ID=cds-TGD01988.1;Parent=gene-C9F09_03060;Dbxref=NCBI_GP:TGD01988.1;Name=TGD01988.1;Note=cleaves DNA 25 basepairs downstream from the recognition site;end_range=491,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=C9F09_03060;partial=true;product=type III restriction endonuclease subunit R;protein_id=TGD01988.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000271.1 1 490 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000271.1 Genbank region 1 490 . + . ID=PYKB01000271.1:1..490;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000271.1 Genbank gene 1 490 . - . ID=gene-C9F09_03065;Name=C9F09_03065;end_range=490,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03065;partial=true;start_range=.,1 PYKB01000271.1 Protein Homology CDS 1 490 . - 1 ID=cds-TGD01979.1;Parent=gene-C9F09_03065;Dbxref=NCBI_GP:TGD01979.1;Name=TGD01979.1;Note=catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine;end_range=490,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=C9F09_03065;partial=true;product=trimethylamine-N-oxide reductase TorA;protein_id=TGD01979.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000265.1 1 489 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000265.1 Genbank region 1 489 . + . ID=PYKB01000265.1:1..489;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000265.1 Genbank pseudogene 1 444 . - . ID=gene-C9F09_02995;Name=C9F09_02995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02995;pseudo=true PYKB01000265.1 Protein Homology CDS 1 444 . - 0 ID=cds-C9F09_02995;Parent=gene-C9F09_02995;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455562.1;locus_tag=C9F09_02995;product=paraquat-inducible protein B;pseudo=true;transl_table=11 ##sequence-region PYKB01000093.1 1 488 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000093.1 Genbank region 1 488 . + . ID=PYKB01000093.1:1..488;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000093.1 Genbank gene 1 488 . + . ID=gene-C9F09_01105;Name=C9F09_01105;end_range=488,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01105;partial=true;start_range=.,1 PYKB01000093.1 Protein Homology CDS 1 488 . + 0 ID=cds-TGD05614.1;Parent=gene-C9F09_01105;Dbxref=NCBI_GP:TGD05614.1;Name=TGD05614.1;end_range=488,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121936.1;locus_tag=C9F09_01105;partial=true;product=sulfate ABC transporter substrate-binding protein;protein_id=TGD05614.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001587.1 1 487 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001587.1 Genbank region 1 487 . + . ID=PYKB01001587.1:1..487;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001587.1 Genbank gene 1 208 . - . ID=gene-C9F09_27885;Name=C9F09_27885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27885;partial=true;start_range=.,1 PYKB01001587.1 Protein Homology CDS 1 208 . - 0 ID=cds-TGC75107.1;Parent=gene-C9F09_27885;Dbxref=NCBI_GP:TGC75107.1;Name=TGC75107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=C9F09_27885;partial=true;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=TGC75107.1;start_range=.,1;transl_table=11 PYKB01001587.1 Genbank gene 205 487 . - . ID=gene-C9F09_27890;Name=C9F09_27890;end_range=487,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27890;partial=true PYKB01001587.1 Protein Homology CDS 205 487 . - 1 ID=cds-TGC75108.1;Parent=gene-C9F09_27890;Dbxref=NCBI_GP:TGC75108.1;Name=TGC75108.1;Note=Catalyzes the transfer of electrons from NADH to quinone;end_range=487,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456862.1;locus_tag=C9F09_27890;partial=true;product=NADH-quinone oxidoreductase subunit J;protein_id=TGC75108.1;transl_table=11 ##sequence-region PYKB01001289.1 1 487 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001289.1 Genbank region 1 487 . + . ID=PYKB01001289.1:1..487;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001289.1 Genbank gene 1 487 . - . ID=gene-C9F09_22045;Name=C9F09_22045;end_range=487,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22045;partial=true;start_range=.,1 PYKB01001289.1 Protein Homology CDS 1 487 . - 1 ID=cds-TGC81835.1;Parent=gene-C9F09_22045;Dbxref=NCBI_GP:TGC81835.1;Name=TGC81835.1;end_range=487,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044774.1;locus_tag=C9F09_22045;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=TGC81835.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000059.1 1 485 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000059.1 Genbank region 1 485 . + . ID=PYKB01000059.1:1..485;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000059.1 Genbank gene 1 394 . - . ID=gene-C9F09_00670;Name=C9F09_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00670;partial=true;start_range=.,1 PYKB01000059.1 Protein Homology CDS 1 394 . - 0 ID=cds-TGD06301.1;Parent=gene-C9F09_00670;Dbxref=NCBI_GP:TGD06301.1;Name=TGD06301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460790.1;locus_tag=C9F09_00670;partial=true;product=manganese efflux pump MntP;protein_id=TGD06301.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000575.1 1 6937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000575.1 Genbank region 1 6937 . + . ID=PYKB01000575.1:1..6937;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000575.1 Genbank gene 1 521 . + . ID=gene-C9F09_08130;Name=C9F09_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08130;partial=true;start_range=.,1 PYKB01000575.1 Protein Homology CDS 1 521 . + 2 ID=cds-TGC95929.1;Parent=gene-C9F09_08130;Dbxref=NCBI_GP:TGC95929.1;Name=TGC95929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456066.1;locus_tag=C9F09_08130;partial=true;product=hypothetical protein;protein_id=TGC95929.1;start_range=.,1;transl_table=11 PYKB01000575.1 Genbank pseudogene 579 1190 . - . ID=gene-C9F09_08135;Name=C9F09_08135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08135;pseudo=true PYKB01000575.1 Protein Homology CDS 579 1190 . - 0 ID=cds-C9F09_08135;Parent=gene-C9F09_08135;Note=regulates malXY which are involved in maltose-glucose transport%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=C9F09_08135;product=Mal regulon transcriptional regulator MalI;pseudo=true;transl_table=11 PYKB01000575.1 Genbank gene 1179 1574 . + . ID=gene-C9F09_08140;Name=C9F09_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08140 PYKB01000575.1 Protein Homology CDS 1179 1574 . + 0 ID=cds-TGC95930.1;Parent=gene-C9F09_08140;Dbxref=NCBI_GP:TGC95930.1;Name=TGC95930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000337798.1;locus_tag=C9F09_08140;product=cystathionine beta-lyase;protein_id=TGC95930.1;transl_table=11 PYKB01000575.1 Genbank gene 1792 2793 . + . ID=gene-C9F09_08145;Name=C9F09_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08145 PYKB01000575.1 Protein Homology CDS 1792 2793 . + 0 ID=cds-TGC95931.1;Parent=gene-C9F09_08145;Dbxref=NCBI_GP:TGC95931.1;Name=TGC95931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456067.1;locus_tag=C9F09_08145;product=adenosine deaminase;protein_id=TGC95931.1;transl_table=11 PYKB01000575.1 Genbank gene 2834 3982 . - . ID=gene-C9F09_08150;Name=C9F09_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08150 PYKB01000575.1 Protein Homology CDS 2834 3982 . - 0 ID=cds-TGC95932.1;Parent=gene-C9F09_08150;Dbxref=NCBI_GP:TGC95932.1;Name=TGC95932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460425.3;locus_tag=C9F09_08150;product=oxidoreductase;protein_id=TGC95932.1;transl_table=11 PYKB01000575.1 Genbank gene 4085 4240 . + . ID=gene-C9F09_08155;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=C9F09_08155 PYKB01000575.1 Protein Homology CDS 4085 4240 . + 0 ID=cds-TGC95933.1;Parent=gene-C9F09_08155;Dbxref=NCBI_GP:TGC95933.1;Name=TGC95933.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991985.1;locus_tag=C9F09_08155;product=division septum protein Blr;protein_id=TGC95933.1;transl_table=11 PYKB01000575.1 Genbank gene 4538 4753 . + . ID=gene-C9F09_08160;Name=C9F09_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08160 PYKB01000575.1 Protein Homology CDS 4538 4753 . + 0 ID=cds-TGC95934.1;Parent=gene-C9F09_08160;Dbxref=NCBI_GP:TGC95934.1;Name=TGC95934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456069.1;locus_tag=C9F09_08160;product=nucleoid-associated protein;protein_id=TGC95934.1;transl_table=11 PYKB01000575.1 Genbank gene 4842 5282 . + . ID=gene-C9F09_08165;Name=C9F09_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08165 PYKB01000575.1 Protein Homology CDS 4842 5282 . + 0 ID=cds-TGC95935.1;Parent=gene-C9F09_08165;Dbxref=NCBI_GP:TGC95935.1;Name=TGC95935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456070.1;locus_tag=C9F09_08165;product=DUF2569 domain-containing protein;protein_id=TGC95935.1;transl_table=11 PYKB01000575.1 Genbank gene 5359 5940 . + . ID=gene-C9F09_08170;Name=C9F09_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08170 PYKB01000575.1 Protein Homology CDS 5359 5940 . + 0 ID=cds-TGC95936.1;Parent=gene-C9F09_08170;Dbxref=NCBI_GP:TGC95936.1;Name=TGC95936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=C9F09_08170;product=electron transport complex subunit A;protein_id=TGC95936.1;transl_table=11 PYKB01000575.1 Genbank gene 5940 6518 . + . ID=gene-C9F09_08175;Name=C9F09_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08175 PYKB01000575.1 Protein Homology CDS 5940 6518 . + 0 ID=cds-TGC95937.1;Parent=gene-C9F09_08175;Dbxref=NCBI_GP:TGC95937.1;Name=TGC95937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=C9F09_08175;product=electron transport complex subunit RsxB;protein_id=TGC95937.1;transl_table=11 PYKB01000575.1 Genbank gene 6511 6937 . + . ID=gene-C9F09_08180;Name=C9F09_08180;end_range=6937,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08180;partial=true PYKB01000575.1 Protein Homology CDS 6511 6937 . + 0 ID=cds-TGC95938.1;Parent=gene-C9F09_08180;Dbxref=NCBI_GP:TGC95938.1;Name=TGC95938.1;end_range=6937,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=C9F09_08180;partial=true;product=electron transport complex subunit RsxC;protein_id=TGC95938.1;transl_table=11 ##sequence-region PYKB01000146.1 1 442 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000146.1 Genbank region 1 442 . + . ID=PYKB01000146.1:1..442;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000146.1 Genbank gene 1 442 . - . ID=gene-C9F09_01655;Name=cdsA;end_range=442,.;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=C9F09_01655;partial=true;start_range=.,1 PYKB01000146.1 Protein Homology CDS 1 442 . - 0 ID=cds-TGD04584.1;Parent=gene-C9F09_01655;Dbxref=NCBI_GP:TGD04584.1;Name=TGD04584.1;Note=catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate;end_range=442,.;gbkey=CDS;gene=cdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454829.1;locus_tag=C9F09_01655;partial=true;product=CDP-diglyceride synthetase;protein_id=TGD04584.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000574.1 1 484 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000574.1 Genbank region 1 484 . + . ID=PYKB01000574.1:1..484;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000574.1 Genbank gene 1 325 . - . ID=gene-C9F09_08125;Name=C9F09_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08125;partial=true;start_range=.,1 PYKB01000574.1 Protein Homology CDS 1 325 . - 0 ID=cds-TGC95955.1;Parent=gene-C9F09_08125;Dbxref=NCBI_GP:TGC95955.1;Name=TGC95955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000433537.1;locus_tag=C9F09_08125;partial=true;product=thiol:disulfide interchange protein;protein_id=TGC95955.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001412.1 1 481 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001412.1 Genbank region 1 481 . + . ID=PYKB01001412.1:1..481;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001412.1 Genbank gene 1 481 . - . ID=gene-C9F09_24255;Name=C9F09_24255;end_range=481,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24255;partial=true;start_range=.,1 PYKB01001412.1 Protein Homology CDS 1 481 . - 0 ID=cds-TGC79215.1;Parent=gene-C9F09_24255;Dbxref=NCBI_GP:TGC79215.1;Name=TGC79215.1;Note=may be involved in the transport of ethanolamine;end_range=481,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=C9F09_24255;partial=true;product=ethanolamine utilization protein EutH;protein_id=TGC79215.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000808.1 1 480 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000808.1 Genbank region 1 480 . + . ID=PYKB01000808.1:1..480;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000808.1 Genbank gene 1 480 . - . ID=gene-C9F09_12595;Name=C9F09_12595;end_range=480,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12595;partial=true;start_range=.,1 PYKB01000808.1 Protein Homology CDS 1 480 . - 0 ID=cds-TGC92037.1;Parent=gene-C9F09_12595;Dbxref=NCBI_GP:TGC92037.1;Name=TGC92037.1;end_range=480,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455854.1;locus_tag=C9F09_12595;partial=true;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=TGC92037.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000809.1 1 478 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000809.1 Genbank region 1 478 . + . ID=PYKB01000809.1:1..478;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000809.1 Genbank pseudogene 1 478 . - . ID=gene-C9F09_12600;Name=C9F09_12600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12600;pseudo=true PYKB01000809.1 Protein Homology CDS 1 478 . - 1 ID=cds-C9F09_12600;Parent=gene-C9F09_12600;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457330.1;locus_tag=C9F09_12600;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;pseudo=true;transl_table=11 ##sequence-region PYKB01000107.1 1 478 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000107.1 Genbank region 1 478 . + . ID=PYKB01000107.1:1..478;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000107.1 Genbank gene 1 478 . + . ID=gene-C9F09_01215;Name=C9F09_01215;end_range=478,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01215;partial=true;start_range=.,1 PYKB01000107.1 Protein Homology CDS 1 478 . + 0 ID=cds-TGD05312.1;Parent=gene-C9F09_01215;Dbxref=NCBI_GP:TGD05312.1;Name=TGD05312.1;end_range=478,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455575.1;locus_tag=C9F09_01215;partial=true;product=hypothetical protein;protein_id=TGD05312.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001738.1 1 477 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001738.1 Genbank region 1 477 . + . ID=PYKB01001738.1:1..477;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001738.1 Genbank gene 302 477 . + . ID=gene-C9F09_30495;Name=C9F09_30495;end_range=477,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30495;partial=true PYKB01001738.1 Protein Homology CDS 302 477 . + 0 ID=cds-TGC70788.1;Parent=gene-C9F09_30495;Dbxref=NCBI_GP:TGC70788.1;Name=TGC70788.1;end_range=477,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454624.1;locus_tag=C9F09_30495;partial=true;product=hypothetical protein;protein_id=TGC70788.1;transl_table=11 ##sequence-region PYKB01000963.1 1 475 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000963.1 Genbank region 1 475 . + . ID=PYKB01000963.1:1..475;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000963.1 Genbank gene 1 475 . + . ID=gene-C9F09_15960;Name=C9F09_15960;end_range=475,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15960;partial=true;start_range=.,1 PYKB01000963.1 Protein Homology CDS 1 475 . + 1 ID=cds-TGC89033.1;Parent=gene-C9F09_15960;Dbxref=NCBI_GP:TGC89033.1;Name=TGC89033.1;end_range=475,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=C9F09_15960;partial=true;product=multifunctional fatty acid oxidation complex subunit alpha;protein_id=TGC89033.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001061.1 1 474 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001061.1 Genbank region 1 474 . + . ID=PYKB01001061.1:1..474;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001061.1 Genbank gene 1 191 . - . ID=gene-C9F09_17785;Name=C9F09_17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17785;partial=true;start_range=.,1 PYKB01001061.1 Protein Homology CDS 1 191 . - 0 ID=cds-TGC86880.1;Parent=gene-C9F09_17785;Dbxref=NCBI_GP:TGC86880.1;Name=TGC86880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456565.1;locus_tag=C9F09_17785;partial=true;product=hypothetical protein;protein_id=TGC86880.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001221.1 1 473 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001221.1 Genbank region 1 473 . + . ID=PYKB01001221.1:1..473;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001221.1 Genbank gene 1 473 . + . ID=gene-C9F09_20720;Name=C9F09_20720;end_range=473,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20720;partial=true;start_range=.,1 PYKB01001221.1 Protein Homology CDS 1 473 . + 0 ID=cds-TGC83034.1;Parent=gene-C9F09_20720;Dbxref=NCBI_GP:TGC83034.1;Name=TGC83034.1;end_range=473,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460251.1;locus_tag=C9F09_20720;partial=true;product=PrkA family serine protein kinase;protein_id=TGC83034.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000529.1 1 6927 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000529.1 Genbank region 1 6927 . + . ID=PYKB01000529.1:1..6927;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000529.1 Genbank gene 1 734 . - . ID=gene-C9F09_07115;Name=C9F09_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07115;partial=true;start_range=.,1 PYKB01000529.1 Protein Homology CDS 1 734 . - 0 ID=cds-TGC97016.1;Parent=gene-C9F09_07115;Dbxref=NCBI_GP:TGC97016.1;Name=TGC97016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=C9F09_07115;partial=true;product=outer membrane assembly protein AsmA;protein_id=TGC97016.1;start_range=.,1;transl_table=11 PYKB01000529.1 Genbank gene 773 1354 . - . ID=gene-C9F09_07120;Name=C9F09_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07120 PYKB01000529.1 Protein Homology CDS 773 1354 . - 0 ID=cds-TGC97011.1;Parent=gene-C9F09_07120;Dbxref=NCBI_GP:TGC97011.1;Name=TGC97011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456667.1;locus_tag=C9F09_07120;product=dCTP deaminase;protein_id=TGC97011.1;transl_table=11 PYKB01000529.1 Genbank gene 1445 2086 . - . ID=gene-C9F09_07125;Name=C9F09_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07125 PYKB01000529.1 Protein Homology CDS 1445 2086 . - 0 ID=cds-TGC97012.1;Parent=gene-C9F09_07125;Dbxref=NCBI_GP:TGC97012.1;Name=TGC97012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456668.1;locus_tag=C9F09_07125;product=uridine kinase;protein_id=TGC97012.1;transl_table=11 PYKB01000529.1 Genbank gene 2417 5407 . + . ID=gene-C9F09_07130;Name=C9F09_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07130 PYKB01000529.1 Protein Homology CDS 2417 5407 . + 0 ID=cds-TGC97013.1;Parent=gene-C9F09_07130;Dbxref=NCBI_GP:TGC97013.1;Name=TGC97013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=C9F09_07130;product=diguanylate cyclase;protein_id=TGC97013.1;transl_table=11 PYKB01000529.1 Genbank gene 5375 6244 . - . ID=gene-C9F09_07135;Name=C9F09_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07135 PYKB01000529.1 Protein Homology CDS 5375 6244 . - 0 ID=cds-TGC97014.1;Parent=gene-C9F09_07135;Dbxref=NCBI_GP:TGC97014.1;Name=TGC97014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=C9F09_07135;product=DNA-3-methyladenine glycosylase 2;protein_id=TGC97014.1;transl_table=11 PYKB01000529.1 Genbank pseudogene 6267 6365 . - . ID=gene-C9F09_07140;Name=C9F09_07140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07140;pseudo=true PYKB01000529.1 Protein Homology CDS 6267 6365 . - 0 ID=cds-C9F09_07140;Parent=gene-C9F09_07140;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001144486.1;locus_tag=C9F09_07140;product=DNA-3-methyladenine glycosidase;pseudo=true;transl_table=11 PYKB01000529.1 Genbank gene 6378 6927 . + . ID=gene-C9F09_07145;Name=C9F09_07145;end_range=6927,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07145;partial=true PYKB01000529.1 Protein Homology CDS 6378 6927 . + 0 ID=cds-TGC97015.1;Parent=gene-C9F09_07145;Dbxref=NCBI_GP:TGC97015.1;Name=TGC97015.1;end_range=6927,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=C9F09_07145;partial=true;product=molecular chaperone;protein_id=TGC97015.1;transl_table=11 ##sequence-region PYKB01000394.1 1 471 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000394.1 Genbank region 1 471 . + . ID=PYKB01000394.1:1..471;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000394.1 Genbank pseudogene 74 400 . - . ID=gene-C9F09_04410;Name=C9F09_04410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04410;pseudo=true PYKB01000394.1 Protein Homology CDS 74 400 . - 0 ID=cds-C9F09_04410;Parent=gene-C9F09_04410;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417622.2;locus_tag=C9F09_04410;product=protease;pseudo=true;transl_table=11 ##sequence-region PYKB01000781.1 1 470 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000781.1 Genbank region 1 470 . + . ID=PYKB01000781.1:1..470;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000781.1 Genbank gene 1 373 . - . ID=gene-C9F09_12070;Name=C9F09_12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12070;partial=true;start_range=.,1 PYKB01000781.1 Protein Homology CDS 1 373 . - 0 ID=cds-TGC92493.1;Parent=gene-C9F09_12070;Dbxref=NCBI_GP:TGC92493.1;Name=TGC92493.1;Note=exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=C9F09_12070;partial=true;product=ATP-dependent RNA helicase DbpA;protein_id=TGC92493.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000518.1 1 470 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000518.1 Genbank region 1 470 . + . ID=PYKB01000518.1:1..470;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000518.1 Genbank gene 1 470 . + . ID=gene-C9F09_06940;Name=C9F09_06940;end_range=470,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06940;partial=true;start_range=.,1 PYKB01000518.1 Protein Homology CDS 1 470 . + 0 ID=cds-TGC97176.1;Parent=gene-C9F09_06940;Dbxref=NCBI_GP:TGC97176.1;Name=TGC97176.1;end_range=470,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183482.1;locus_tag=C9F09_06940;partial=true;product=transketolase;protein_id=TGC97176.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000096.1 1 470 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000096.1 Genbank region 1 470 . + . ID=PYKB01000096.1:1..470;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000096.1 Genbank gene 1 470 . + . ID=gene-C9F09_01125;Name=leuS;end_range=470,.;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=C9F09_01125;partial=true;start_range=.,1 PYKB01000096.1 Protein Homology CDS 1 470 . + 1 ID=cds-TGD05560.1;Parent=gene-C9F09_01125;Dbxref=NCBI_GP:TGD05560.1;Name=TGD05560.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;end_range=470,.;gbkey=CDS;gene=leuS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455224.1;locus_tag=C9F09_01125;partial=true;product=leucine--tRNA ligase;protein_id=TGD05560.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000228.1 1 469 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000228.1 Genbank region 1 469 . + . ID=PYKB01000228.1:1..469;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000228.1 Genbank gene 1 94 . - . ID=gene-C9F09_02460;Name=C9F09_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02460;partial=true;start_range=.,1 PYKB01000228.1 Protein Homology CDS 1 94 . - 0 ID=cds-TGD03137.1;Parent=gene-C9F09_02460;Dbxref=NCBI_GP:TGD03137.1;Name=TGD03137.1;Note=involved in the transport of glycerol into the cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456587.1;locus_tag=C9F09_02460;partial=true;product=aquaporin;protein_id=TGD03137.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001596.1 1 468 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001596.1 Genbank region 1 468 . + . ID=PYKB01001596.1:1..468;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001596.1 Genbank pseudogene 43 390 . + . ID=gene-C9F09_28065;Name=C9F09_28065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28065;pseudo=true PYKB01001596.1 Protein Homology CDS 43 390 . + 0 ID=cds-C9F09_28065;Parent=gene-C9F09_28065;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456927.1;locus_tag=C9F09_28065;product=endonuclease SmrB;pseudo=true;transl_table=11 ##sequence-region PYKB01001653.1 1 468 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001653.1 Genbank region 1 468 . + . ID=PYKB01001653.1:1..468;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001653.1 Genbank gene 1 468 . + . ID=gene-C9F09_28845;Name=C9F09_28845;end_range=468,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28845;partial=true;start_range=.,1 PYKB01001653.1 Protein Homology CDS 1 468 . + 0 ID=cds-TGC73464.1;Parent=gene-C9F09_28845;Dbxref=NCBI_GP:TGC73464.1;Name=TGC73464.1;end_range=468,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455355.1;locus_tag=C9F09_28845;partial=true;product=multidrug ABC transporter ATP-binding protein;protein_id=TGC73464.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000452.1 1 467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000452.1 Genbank region 1 467 . + . ID=PYKB01000452.1:1..467;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000452.1 Genbank gene 1 392 . + . ID=gene-C9F09_05630;Name=C9F09_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05630;partial=true;start_range=.,1 PYKB01000452.1 Protein Homology CDS 1 392 . + 2 ID=cds-TGC98584.1;Parent=gene-C9F09_05630;Dbxref=NCBI_GP:TGC98584.1;Name=TGC98584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458410.3;locus_tag=C9F09_05630;partial=true;product=ADP compounds hydrolase NudE;protein_id=TGC98584.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000177.1 1 467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000177.1 Genbank region 1 467 . + . ID=PYKB01000177.1:1..467;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000177.1 Genbank gene 79 467 . + . ID=gene-C9F09_01985;Name=C9F09_01985;end_range=467,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01985;partial=true PYKB01000177.1 Protein Homology CDS 79 467 . + 0 ID=cds-TGD03843.1;Parent=gene-C9F09_01985;Dbxref=NCBI_GP:TGD03843.1;Name=TGD03843.1;end_range=467,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310542.1;locus_tag=C9F09_01985;partial=true;product=hypothetical protein;protein_id=TGD03843.1;transl_table=11 ##sequence-region PYKB01000313.1 1 466 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000313.1 Genbank region 1 466 . + . ID=PYKB01000313.1:1..466;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000313.1 Genbank gene 1 165 . - . ID=gene-C9F09_03510;Name=C9F09_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03510;partial=true;start_range=.,1 PYKB01000313.1 Protein Homology CDS 1 165 . - 0 ID=cds-TGD01300.1;Parent=gene-C9F09_03510;Dbxref=NCBI_GP:TGD01300.1;Name=TGD01300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455602.1;locus_tag=C9F09_03510;partial=true;product=hypothetical protein;protein_id=TGD01300.1;start_range=.,1;transl_table=11 PYKB01000313.1 Genbank gene 176 466 . - . ID=gene-C9F09_03515;Name=C9F09_03515;end_range=466,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03515;partial=true PYKB01000313.1 Protein Homology CDS 176 466 . - 0 ID=cds-TGD01301.1;Parent=gene-C9F09_03515;Dbxref=NCBI_GP:TGD01301.1;Name=TGD01301.1;end_range=466,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455601.1;locus_tag=C9F09_03515;partial=true;product=hypothetical protein;protein_id=TGD01301.1;transl_table=11 ##sequence-region PYKB01001571.1 1 6891 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001571.1 Genbank region 1 6891 . + . ID=PYKB01001571.1:1..6891;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001571.1 Genbank gene 1 228 . - . ID=gene-C9F09_27410;Name=C9F09_27410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27410;partial=true;start_range=.,1 PYKB01001571.1 Protein Homology CDS 1 228 . - 0 ID=cds-TGC75537.1;Parent=gene-C9F09_27410;Dbxref=NCBI_GP:TGC75537.1;Name=TGC75537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455185.1;locus_tag=C9F09_27410;partial=true;product=alkyl hydroperoxide reductase;protein_id=TGC75537.1;start_range=.,1;transl_table=11 PYKB01001571.1 Genbank gene 470 1033 . - . ID=gene-C9F09_27415;Name=C9F09_27415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27415 PYKB01001571.1 Protein Homology CDS 470 1033 . - 0 ID=cds-TGC75538.1;Parent=gene-C9F09_27415;Dbxref=NCBI_GP:TGC75538.1;Name=TGC75538.1;Note=with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols%3B AhpC reduced the hydroperoxide substrate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=C9F09_27415;product=peroxiredoxin;protein_id=TGC75538.1;transl_table=11 PYKB01001571.1 Genbank gene 1474 2220 . + . ID=gene-C9F09_27420;Name=C9F09_27420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27420 PYKB01001571.1 Protein Homology CDS 1474 2220 . + 0 ID=cds-TGC75539.1;Parent=gene-C9F09_27420;Dbxref=NCBI_GP:TGC75539.1;Name=TGC75539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=C9F09_27420;product=thiol:disulfide interchange protein DsbG;protein_id=TGC75539.1;transl_table=11 PYKB01001571.1 Genbank pseudogene 2376 2612 . + . ID=gene-C9F09_27425;Name=C9F09_27425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_27425;pseudo=true PYKB01001571.1 Protein Homology CDS 2376 2612 . + 0 ID=cds-C9F09_27425;Parent=gene-C9F09_27425;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663639.1;locus_tag=C9F09_27425;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001571.1 Genbank gene 2537 3439 . + . ID=gene-C9F09_27430;Name=C9F09_27430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27430 PYKB01001571.1 Protein Homology CDS 2537 3439 . + 0 ID=cds-TGC75540.1;Parent=gene-C9F09_27430;Dbxref=NCBI_GP:TGC75540.1;Name=TGC75540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=C9F09_27430;product=LysR family transcriptional regulator;protein_id=TGC75540.1;transl_table=11 PYKB01001571.1 Genbank gene 3605 4840 . + . ID=gene-C9F09_27435;Name=C9F09_27435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27435 PYKB01001571.1 Protein Homology CDS 3605 4840 . + 0 ID=cds-TGC75541.1;Parent=gene-C9F09_27435;Dbxref=NCBI_GP:TGC75541.1;Name=TGC75541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=C9F09_27435;product=phosphoadenosine phosphosulfate reductase;protein_id=TGC75541.1;transl_table=11 PYKB01001571.1 Genbank gene 4813 5430 . + . ID=gene-C9F09_27440;Name=C9F09_27440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27440 PYKB01001571.1 Protein Homology CDS 4813 5430 . + 0 ID=cds-TGC75542.1;Parent=gene-C9F09_27440;Dbxref=NCBI_GP:TGC75542.1;Name=TGC75542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=C9F09_27440;product=hypothetical protein;protein_id=TGC75542.1;transl_table=11 PYKB01001571.1 Genbank gene 5431 6591 . - . ID=gene-C9F09_27445;Name=C9F09_27445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27445 PYKB01001571.1 Protein Homology CDS 5431 6591 . - 0 ID=cds-TGC75543.1;Parent=gene-C9F09_27445;Dbxref=NCBI_GP:TGC75543.1;Name=TGC75543.1;Note=catalyzes the transfer of an amino moiety%3B preference for methionine followed by histidine and phenylalanine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=C9F09_27445;product=methionine aminotransferase;protein_id=TGC75543.1;transl_table=11 ##sequence-region PYKB01000006.1 1 463 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000006.1 Genbank region 1 463 . + . ID=PYKB01000006.1:1..463;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000006.1 Genbank gene 1 291 . + . ID=gene-C9F09_00035;Name=C9F09_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00035;partial=true;start_range=.,1 PYKB01000006.1 Protein Homology CDS 1 291 . + 0 ID=cds-TGD07296.1;Parent=gene-C9F09_00035;Dbxref=NCBI_GP:TGD07296.1;Name=TGD07296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455243.1;locus_tag=C9F09_00035;partial=true;product=transcriptional regulator;protein_id=TGD07296.1;start_range=.,1;transl_table=11 PYKB01000006.1 Genbank gene 338 463 . + . ID=gene-C9F09_00040;Name=C9F09_00040;end_range=463,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00040;partial=true PYKB01000006.1 Protein Homology CDS 338 463 . + 0 ID=cds-TGD07297.1;Parent=gene-C9F09_00040;Dbxref=NCBI_GP:TGD07297.1;Name=TGD07297.1;end_range=463,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455242.1;locus_tag=C9F09_00040;partial=true;product=UMP phosphatase;protein_id=TGD07297.1;transl_table=11 ##sequence-region PYKB01000708.1 1 463 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000708.1 Genbank region 1 463 . + . ID=PYKB01000708.1:1..463;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000708.1 Genbank gene 12 463 . + . ID=gene-C9F09_10770;Name=C9F09_10770;end_range=463,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10770;partial=true PYKB01000708.1 Protein Homology CDS 12 463 . + 0 ID=cds-TGC93592.1;Parent=gene-C9F09_10770;Dbxref=NCBI_GP:TGC93592.1;Name=TGC93592.1;Note=represses the modABCD operon and activates the moaABCD and napFDAGHBC operons;end_range=463,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=C9F09_10770;partial=true;product=molybdenum-dependent transcriptional regulator;protein_id=TGC93592.1;transl_table=11 ##sequence-region PYKB01000685.1 1 456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000685.1 Genbank region 1 456 . + . ID=PYKB01000685.1:1..456;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000685.1 Genbank pseudogene 16 456 . - . ID=gene-C9F09_10395;Name=C9F09_10395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10395;pseudo=true PYKB01000685.1 Protein Homology CDS 16 456 . - 0 ID=cds-C9F09_10395;Parent=gene-C9F09_10395;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455464.1;locus_tag=C9F09_10395;product=phosphoserine transaminase;pseudo=true;transl_table=11 ##sequence-region PYKB01001624.1 1 456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001624.1 Genbank region 1 456 . + . ID=PYKB01001624.1:1..456;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001624.1 Genbank gene 1 456 . - . ID=gene-C9F09_28430;Name=C9F09_28430;end_range=456,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28430;partial=true;start_range=.,1 PYKB01001624.1 Protein Homology CDS 1 456 . - 1 ID=cds-TGC74220.1;Parent=gene-C9F09_28430;Dbxref=NCBI_GP:TGC74220.1;Name=TGC74220.1;end_range=456,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=C9F09_28430;partial=true;product=hypothetical protein;protein_id=TGC74220.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000599.1 1 453 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000599.1 Genbank region 1 453 . + . ID=PYKB01000599.1:1..453;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000599.1 Genbank gene 54 167 . + . ID=gene-C9F09_08760;Name=C9F09_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08760 PYKB01000599.1 Protein Homology CDS 54 167 . + 0 ID=cds-TGC95328.1;Parent=gene-C9F09_08760;Dbxref=NCBI_GP:TGC95328.1;Name=TGC95328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531359.1;locus_tag=C9F09_08760;product=transporter;protein_id=TGC95328.1;transl_table=11 PYKB01000599.1 Genbank gene 211 453 . + . ID=gene-C9F09_08765;Name=C9F09_08765;end_range=453,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08765;partial=true PYKB01000599.1 Protein Homology CDS 211 453 . + 0 ID=cds-TGC95327.1;Parent=gene-C9F09_08765;Dbxref=NCBI_GP:TGC95327.1;Name=TGC95327.1;end_range=453,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455269.1;locus_tag=C9F09_08765;partial=true;product=MFS transporter;protein_id=TGC95327.1;transl_table=11 ##sequence-region PYKB01000118.1 1 448 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000118.1 Genbank region 1 448 . + . ID=PYKB01000118.1:1..448;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000118.1 Genbank gene 1 210 . + . ID=gene-C9F09_01330;Name=C9F09_01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01330;partial=true;start_range=.,1 PYKB01000118.1 Protein Homology CDS 1 210 . + 0 ID=cds-TGD05148.1;Parent=gene-C9F09_01330;Dbxref=NCBI_GP:TGD05148.1;Name=TGD05148.1;Note=catalyzes the formation of 2%2C4-dinitrophenyl-S-glutathione from 1-chloro-2%2C4-dinitrobenzene and glutathione;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=C9F09_01330;partial=true;product=glutathione S-transferase;protein_id=TGD05148.1;start_range=.,1;transl_table=11 PYKB01000118.1 Genbank gene 266 448 . + . ID=gene-C9F09_01335;Name=C9F09_01335;end_range=448,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01335;partial=true PYKB01000118.1 Protein Homology CDS 266 448 . + 0 ID=cds-TGD05149.1;Parent=gene-C9F09_01335;Dbxref=NCBI_GP:TGD05149.1;Name=TGD05149.1;end_range=448,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004595069.1;locus_tag=C9F09_01335;partial=true;product=YfcE family phosphodiesterase;protein_id=TGD05149.1;transl_table=11 ##sequence-region PYKB01000261.1 1 447 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000261.1 Genbank region 1 447 . + . ID=PYKB01000261.1:1..447;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000261.1 Genbank gene 1 312 . + . ID=gene-C9F09_02970;Name=C9F09_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02970;partial=true;start_range=.,1 PYKB01000261.1 Protein Homology CDS 1 312 . + 0 ID=cds-TGD02245.1;Parent=gene-C9F09_02970;Dbxref=NCBI_GP:TGD02245.1;Name=TGD02245.1;Note=involved in the phosphorylation and transport of sugars across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458819.1;locus_tag=C9F09_02970;partial=true;product=PTS ascorbate-specific transporter subunit IIA;protein_id=TGD02245.1;start_range=.,1;transl_table=11 PYKB01000261.1 Genbank gene 326 447 . + . ID=gene-C9F09_02975;Name=ulaD;end_range=447,.;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=C9F09_02975;partial=true PYKB01000261.1 Protein Homology CDS 326 447 . + 0 ID=cds-TGD02246.1;Parent=gene-C9F09_02975;Dbxref=NCBI_GP:TGD02246.1;Name=TGD02246.1;Note=catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization;end_range=447,.;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313199.1;locus_tag=C9F09_02975;partial=true;product=3-keto-L-gulonate-6-phosphate decarboxylase;protein_id=TGD02246.1;transl_table=11 ##sequence-region PYKB01000383.1 1 444 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000383.1 Genbank region 1 444 . + . ID=PYKB01000383.1:1..444;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000383.1 Genbank gene 65 444 . + . ID=gene-C9F09_04340;Name=C9F09_04340;end_range=444,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04340;partial=true PYKB01000383.1 Protein Homology CDS 65 444 . + 0 ID=cds-TGC99960.1;Parent=gene-C9F09_04340;Dbxref=NCBI_GP:TGC99960.1;Name=TGC99960.1;end_range=444,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=C9F09_04340;partial=true;product=HTH-type transcriptional regulator HdfR;protein_id=TGC99960.1;transl_table=11 ##sequence-region PYKB01000662.1 1 440 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000662.1 Genbank region 1 440 . + . ID=PYKB01000662.1:1..440;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000662.1 Genbank gene 1 440 . + . ID=gene-C9F09_09950;Name=C9F09_09950;end_range=440,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09950;partial=true;start_range=.,1 PYKB01000662.1 Protein Homology CDS 1 440 . + 1 ID=cds-TGC94186.1;Parent=gene-C9F09_09950;Dbxref=NCBI_GP:TGC94186.1;Name=TGC94186.1;end_range=440,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458567.1;locus_tag=C9F09_09950;partial=true;product=Na+/H+ antiporter;protein_id=TGC94186.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001321.1 1 439 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001321.1 Genbank region 1 439 . + . ID=PYKB01001321.1:1..439;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001321.1 Genbank gene 1 439 . - . ID=gene-C9F09_22690;Name=C9F09_22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22690;partial=true;start_range=.,1 PYKB01001321.1 Protein Homology CDS 1 439 . - 0 ID=cds-TGC81134.1;Parent=gene-C9F09_22690;Dbxref=NCBI_GP:TGC81134.1;Name=TGC81134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001638058.1;locus_tag=C9F09_22690;partial=true;product=electron transport complex subunit RsxG;protein_id=TGC81134.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000738.1 1 6875 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000738.1 Genbank region 1 6875 . + . ID=PYKB01000738.1:1..6875;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000738.1 Genbank gene 1 186 . - . ID=gene-C9F09_11335;Name=C9F09_11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11335;partial=true;start_range=.,1 PYKB01000738.1 Protein Homology CDS 1 186 . - 0 ID=cds-TGC93165.1;Parent=gene-C9F09_11335;Dbxref=NCBI_GP:TGC93165.1;Name=TGC93165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936587.1;locus_tag=C9F09_11335;partial=true;product=hypothetical protein;protein_id=TGC93165.1;start_range=.,1;transl_table=11 PYKB01000738.1 Genbank gene 400 834 . + . ID=gene-C9F09_11340;Name=C9F09_11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11340 PYKB01000738.1 Protein Homology CDS 400 834 . + 0 ID=cds-TGC93166.1;Parent=gene-C9F09_11340;Dbxref=NCBI_GP:TGC93166.1;Name=TGC93166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455852.1;locus_tag=C9F09_11340;product=universal stress protein UspF;protein_id=TGC93166.1;transl_table=11 PYKB01000738.1 Genbank gene 884 1222 . - . ID=gene-C9F09_11345;Name=C9F09_11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11345 PYKB01000738.1 Protein Homology CDS 884 1222 . - 0 ID=cds-TGC93167.1;Parent=gene-C9F09_11345;Dbxref=NCBI_GP:TGC93167.1;Name=TGC93167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455851.1;locus_tag=C9F09_11345;product=QacE family quaternary ammonium compound efflux SMR transporter;protein_id=TGC93167.1;transl_table=11 PYKB01000738.1 Genbank gene 1496 4918 . - . ID=gene-C9F09_11350;Name=C9F09_11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11350 PYKB01000738.1 Protein Homology CDS 1496 4918 . - 0 ID=cds-TGC93168.1;Parent=gene-C9F09_11350;Dbxref=NCBI_GP:TGC93168.1;Name=TGC93168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835222.1;locus_tag=C9F09_11350;product=DUF4765 domain-containing protein;protein_id=TGC93168.1;transl_table=11 PYKB01000738.1 Genbank gene 5362 5499 . + . ID=gene-C9F09_11355;Name=C9F09_11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11355 PYKB01000738.1 Protein Homology CDS 5362 5499 . + 0 ID=cds-TGC93169.1;Parent=gene-C9F09_11355;Dbxref=NCBI_GP:TGC93169.1;Name=TGC93169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005023097.1;locus_tag=C9F09_11355;product=hypothetical protein;protein_id=TGC93169.1;transl_table=11 PYKB01000738.1 Genbank gene 5605 6540 . + . ID=gene-C9F09_11360;Name=C9F09_11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11360 PYKB01000738.1 Protein Homology CDS 5605 6540 . + 0 ID=cds-TGC93170.1;Parent=gene-C9F09_11360;Dbxref=NCBI_GP:TGC93170.1;Name=TGC93170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455849.1;locus_tag=C9F09_11360;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=TGC93170.1;transl_table=11 PYKB01000738.1 Genbank gene 6584 6875 . - . ID=gene-C9F09_11365;Name=C9F09_11365;end_range=6875,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11365;partial=true PYKB01000738.1 Protein Homology CDS 6584 6875 . - 1 ID=cds-TGC93171.1;Parent=gene-C9F09_11365;Dbxref=NCBI_GP:TGC93171.1;Name=TGC93171.1;Note=exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA;end_range=6875,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=C9F09_11365;partial=true;product=ATP-dependent RNA helicase DbpA;protein_id=TGC93171.1;transl_table=11 ##sequence-region PYKB01000039.1 1 437 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000039.1 Genbank region 1 437 . + . ID=PYKB01000039.1:1..437;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000039.1 Genbank pseudogene 64 396 . + . ID=gene-C9F09_00475;Name=C9F09_00475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00475;pseudo=true PYKB01000039.1 Protein Homology CDS 64 396 . + 0 ID=cds-C9F09_00475;Parent=gene-C9F09_00475;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=C9F09_00475;product=DNA-binding response regulator;pseudo=true;transl_table=11 ##sequence-region PYKB01001697.1 1 434 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001697.1 Genbank region 1 434 . + . ID=PYKB01001697.1:1..434;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001697.1 Genbank gene 1 434 . + . ID=gene-C9F09_29660;Name=cobS;end_range=434,.;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=C9F09_29660;partial=true;start_range=.,1 PYKB01001697.1 Protein Homology CDS 1 434 . + 1 ID=cds-TGC72190.1;Parent=gene-C9F09_29660;Dbxref=NCBI_GP:TGC72190.1;Name=TGC72190.1;end_range=434,.;gbkey=CDS;gene=cobS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456571.1;locus_tag=C9F09_29660;partial=true;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=TGC72190.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000128.1 1 433 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000128.1 Genbank region 1 433 . + . ID=PYKB01000128.1:1..433;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000128.1 Genbank gene 1 433 . + . ID=gene-C9F09_01460;Name=C9F09_01460;end_range=433,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01460;partial=true;start_range=.,1 PYKB01000128.1 Protein Homology CDS 1 433 . + 0 ID=cds-TGD04913.1;Parent=gene-C9F09_01460;Dbxref=NCBI_GP:TGD04913.1;Name=TGD04913.1;end_range=433,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=C9F09_01460;partial=true;product=DNA repair protein;protein_id=TGD04913.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000044.1 1 430 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000044.1 Genbank region 1 430 . + . ID=PYKB01000044.1:1..430;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000044.1 Genbank gene 1 430 . + . ID=gene-C9F09_00505;Name=C9F09_00505;end_range=430,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00505;partial=true;start_range=.,1 PYKB01000044.1 Protein Homology CDS 1 430 . + 0 ID=cds-TGD06572.1;Parent=gene-C9F09_00505;Dbxref=NCBI_GP:TGD06572.1;Name=TGD06572.1;end_range=430,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454774.1;locus_tag=C9F09_00505;partial=true;product=2-keto-3-deoxygluconate permease 1;protein_id=TGD06572.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000238.1 1 427 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000238.1 Genbank region 1 427 . + . ID=PYKB01000238.1:1..427;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000238.1 Genbank gene 1 299 . + . ID=gene-C9F09_02580;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=C9F09_02580;partial=true;start_range=.,1 PYKB01000238.1 Protein Homology CDS 1 299 . + 2 ID=cds-TGD02892.1;Parent=gene-C9F09_02580;Dbxref=NCBI_GP:TGD02892.1;Name=TGD02892.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=C9F09_02580;partial=true;product=transcriptional regulator CysB;protein_id=TGD02892.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001558.1 1 426 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001558.1 Genbank region 1 426 . + . ID=PYKB01001558.1:1..426;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001558.1 Genbank pseudogene 61 426 . - . ID=gene-C9F09_27230;Name=C9F09_27230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_27230;pseudo=true PYKB01001558.1 Protein Homology CDS 61 426 . - 0 ID=cds-C9F09_27230;Parent=gene-C9F09_27230;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015968581.1;locus_tag=C9F09_27230;product=phage tail tape measure protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000373.1 1 422 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000373.1 Genbank region 1 422 . + . ID=PYKB01000373.1:1..422;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000373.1 Genbank gene 1 422 . + . ID=gene-C9F09_04265;Name=C9F09_04265;end_range=422,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04265;partial=true;start_range=.,1 PYKB01000373.1 Protein Homology CDS 1 422 . + 1 ID=cds-TGD00077.1;Parent=gene-C9F09_04265;Dbxref=NCBI_GP:TGD00077.1;Name=TGD00077.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;end_range=422,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457602.1;locus_tag=C9F09_04265;partial=true;product=RNA polymerase sigma factor RpoD;protein_id=TGD00077.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000712.1 1 420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000712.1 Genbank region 1 420 . + . ID=PYKB01000712.1:1..420;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000712.1 Genbank gene 1 420 . + . ID=gene-C9F09_10875;Name=C9F09_10875;end_range=420,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10875;partial=true;start_range=.,1 PYKB01000712.1 Protein Homology CDS 1 420 . + 0 ID=cds-TGC93533.1;Parent=gene-C9F09_10875;Dbxref=NCBI_GP:TGC93533.1;Name=TGC93533.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;end_range=420,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460845.1;locus_tag=C9F09_10875;partial=true;product=pyruvate kinase;protein_id=TGC93533.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000181.1 1 420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000181.1 Genbank region 1 420 . + . ID=PYKB01000181.1:1..420;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000181.1 Genbank gene 1 420 . - . ID=gene-C9F09_02030;Name=C9F09_02030;end_range=420,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02030;partial=true;start_range=.,1 PYKB01000181.1 Protein Homology CDS 1 420 . - 1 ID=cds-TGD03831.1;Parent=gene-C9F09_02030;Dbxref=NCBI_GP:TGD03831.1;Name=TGD03831.1;end_range=420,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=C9F09_02030;partial=true;product=cobalamin biosynthesis protein CbiM;protein_id=TGD03831.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000199.1 1 416 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000199.1 Genbank region 1 416 . + . ID=PYKB01000199.1:1..416;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000199.1 Genbank gene 1 416 . + . ID=gene-C9F09_02190;Name=C9F09_02190;end_range=416,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02190;partial=true;start_range=.,1 PYKB01000199.1 Protein Homology CDS 1 416 . + 1 ID=cds-TGD03724.1;Parent=gene-C9F09_02190;Dbxref=NCBI_GP:TGD03724.1;Name=TGD03724.1;end_range=416,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457003.1;locus_tag=C9F09_02190;partial=true;product=ethanolamine utilization protein EutP;protein_id=TGD03724.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001712.1 1 6842 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001712.1 Genbank region 1 6842 . + . ID=PYKB01001712.1:1..6842;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001712.1 Genbank gene 1 336 . - . ID=gene-C9F09_29925;Name=C9F09_29925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29925;partial=true;start_range=.,1 PYKB01001712.1 Protein Homology CDS 1 336 . - 0 ID=cds-TGC71717.1;Parent=gene-C9F09_29925;Dbxref=NCBI_GP:TGC71717.1;Name=TGC71717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458255.1;locus_tag=C9F09_29925;partial=true;product=hypothetical protein;protein_id=TGC71717.1;start_range=.,1;transl_table=11 PYKB01001712.1 Genbank gene 339 812 . - . ID=gene-C9F09_29930;Name=C9F09_29930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29930 PYKB01001712.1 Protein Homology CDS 339 812 . - 0 ID=cds-TGC71718.1;Parent=gene-C9F09_29930;Dbxref=NCBI_GP:TGC71718.1;Name=TGC71718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458256.1;locus_tag=C9F09_29930;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=TGC71718.1;transl_table=11 PYKB01001712.1 Genbank gene 941 1882 . - . ID=gene-C9F09_29935;Name=C9F09_29935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29935 PYKB01001712.1 Protein Homology CDS 941 1882 . - 0 ID=cds-TGC71719.1;Parent=gene-C9F09_29935;Dbxref=NCBI_GP:TGC71719.1;Name=TGC71719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466038.1;locus_tag=C9F09_29935;product=DUF4862 domain-containing protein;protein_id=TGC71719.1;transl_table=11 PYKB01001712.1 Genbank gene 1906 2370 . - . ID=gene-C9F09_29940;Name=C9F09_29940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29940 PYKB01001712.1 Protein Homology CDS 1906 2370 . - 0 ID=cds-TGC71720.1;Parent=gene-C9F09_29940;Dbxref=NCBI_GP:TGC71720.1;Name=TGC71720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=C9F09_29940;product=YhcH/YjgK/YiaL family protein;protein_id=TGC71720.1;transl_table=11 PYKB01001712.1 Genbank gene 2382 3380 . - . ID=gene-C9F09_29945;Name=C9F09_29945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29945 PYKB01001712.1 Protein Homology CDS 2382 3380 . - 0 ID=cds-TGC71721.1;Parent=gene-C9F09_29945;Dbxref=NCBI_GP:TGC71721.1;Name=TGC71721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=C9F09_29945;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=TGC71721.1;transl_table=11 PYKB01001712.1 Genbank gene 3610 4416 . + . ID=gene-C9F09_29950;Name=C9F09_29950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29950 PYKB01001712.1 Protein Homology CDS 3610 4416 . + 0 ID=cds-TGC71722.1;Parent=gene-C9F09_29950;Dbxref=NCBI_GP:TGC71722.1;Name=TGC71722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=C9F09_29950;product=IclR family transcriptional regulator;protein_id=TGC71722.1;transl_table=11 PYKB01001712.1 Genbank gene 4533 5006 . + . ID=gene-C9F09_29955;Name=C9F09_29955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29955 PYKB01001712.1 Protein Homology CDS 4533 5006 . + 0 ID=cds-TGC71723.1;Parent=gene-C9F09_29955;Dbxref=NCBI_GP:TGC71723.1;Name=TGC71723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458261.1;locus_tag=C9F09_29955;product=electron transporter;protein_id=TGC71723.1;transl_table=11 PYKB01001712.1 Genbank gene 5043 6293 . - . ID=gene-C9F09_29960;Name=C9F09_29960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29960 PYKB01001712.1 Protein Homology CDS 5043 6293 . - 0 ID=cds-TGC71724.1;Parent=gene-C9F09_29960;Dbxref=NCBI_GP:TGC71724.1;Name=TGC71724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=C9F09_29960;product=valine--pyruvate transaminase;protein_id=TGC71724.1;transl_table=11 PYKB01001712.1 Genbank gene 6467 6842 . - . ID=gene-C9F09_29965;Name=malS;end_range=6842,.;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=C9F09_29965;partial=true PYKB01001712.1 Protein Homology CDS 6467 6842 . - 1 ID=cds-TGC71725.1;Parent=gene-C9F09_29965;Dbxref=NCBI_GP:TGC71725.1;Name=TGC71725.1;Note=periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds;end_range=6842,.;gbkey=CDS;gene=malS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458263.1;locus_tag=C9F09_29965;partial=true;product=alpha-amylase;protein_id=TGC71725.1;transl_table=11 ##sequence-region PYKB01001194.1 1 415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001194.1 Genbank region 1 415 . + . ID=PYKB01001194.1:1..415;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001194.1 Genbank pseudogene 1 415 . - . ID=gene-C9F09_20355;Name=C9F09_20355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_20355;pseudo=true PYKB01001194.1 Protein Homology CDS 1 415 . - 0 ID=cds-C9F09_20355;Parent=gene-C9F09_20355;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=C9F09_20355;product=phosphate acetyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKB01001393.1 1 414 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001393.1 Genbank region 1 414 . + . ID=PYKB01001393.1:1..414;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001393.1 Genbank gene 1 414 . - . ID=gene-C9F09_23950;Name=C9F09_23950;end_range=414,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23950;partial=true;start_range=.,1 PYKB01001393.1 Protein Homology CDS 1 414 . - 1 ID=cds-TGC79612.1;Parent=gene-C9F09_23950;Dbxref=NCBI_GP:TGC79612.1;Name=TGC79612.1;end_range=414,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653833.1;locus_tag=C9F09_23950;partial=true;product=2-ketogluconate transporter;protein_id=TGC79612.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000339.1 1 414 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000339.1 Genbank region 1 414 . + . ID=PYKB01000339.1:1..414;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000339.1 Genbank gene 1 111 . + . ID=gene-C9F09_03765;Name=C9F09_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03765;partial=true;start_range=.,1 PYKB01000339.1 Protein Homology CDS 1 111 . + 0 ID=cds-TGD00781.1;Parent=gene-C9F09_03765;Dbxref=NCBI_GP:TGD00781.1;Name=TGD00781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=C9F09_03765;partial=true;product=hypothetical protein;protein_id=TGD00781.1;start_range=.,1;transl_table=11 PYKB01000339.1 Genbank gene 175 414 . + . ID=gene-C9F09_03770;Name=C9F09_03770;end_range=414,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03770;partial=true PYKB01000339.1 Protein Homology CDS 175 414 . + 0 ID=cds-TGD00782.1;Parent=gene-C9F09_03770;Dbxref=NCBI_GP:TGD00782.1;Name=TGD00782.1;end_range=414,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458521.1;locus_tag=C9F09_03770;partial=true;product=hypothetical protein;protein_id=TGD00782.1;transl_table=11 ##sequence-region PYKB01001337.1 1 414 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001337.1 Genbank region 1 414 . + . ID=PYKB01001337.1:1..414;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001337.1 Genbank gene 1 299 . + . ID=gene-C9F09_22975;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=C9F09_22975;partial=true;start_range=.,1 PYKB01001337.1 Protein Homology CDS 1 299 . + 2 ID=cds-TGC80779.1;Parent=gene-C9F09_22975;Dbxref=NCBI_GP:TGC80779.1;Name=TGC80779.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458984.1;locus_tag=C9F09_22975;partial=true;product=lipoate-protein ligase LplA;protein_id=TGC80779.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000205.1 1 414 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000205.1 Genbank region 1 414 . + . ID=PYKB01000205.1:1..414;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000205.1 Genbank gene 1 316 . - . ID=gene-C9F09_02245;Name=C9F09_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02245;partial=true;start_range=.,1 PYKB01000205.1 Protein Homology CDS 1 316 . - 0 ID=cds-TGD03654.1;Parent=gene-C9F09_02245;Dbxref=NCBI_GP:TGD03654.1;Name=TGD03654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=C9F09_02245;partial=true;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=TGD03654.1;start_range=.,1;transl_table=11 PYKB01000205.1 Genbank gene 310 414 . - . ID=gene-C9F09_02250;Name=C9F09_02250;end_range=414,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02250;partial=true PYKB01000205.1 Protein Homology CDS 310 414 . - 0 ID=cds-TGD03655.1;Parent=gene-C9F09_02250;Dbxref=NCBI_GP:TGD03655.1;Name=TGD03655.1;end_range=414,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456745.1;locus_tag=C9F09_02250;partial=true;product=NADH-dependent dehydrogenase;protein_id=TGD03655.1;transl_table=11 ##sequence-region PYKB01001497.1 1 413 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001497.1 Genbank region 1 413 . + . ID=PYKB01001497.1:1..413;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001497.1 Genbank gene 1 413 . + . ID=gene-C9F09_25985;Name=C9F09_25985;end_range=413,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25985;partial=true;start_range=.,1 PYKB01001497.1 Protein Homology CDS 1 413 . + 1 ID=cds-TGC77358.1;Parent=gene-C9F09_25985;Dbxref=NCBI_GP:TGC77358.1;Name=TGC77358.1;end_range=413,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9F09_25985;partial=true;product=heme lyase NrfEFG subunit NrfF;protein_id=TGC77358.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000040.1 1 412 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000040.1 Genbank region 1 412 . + . ID=PYKB01000040.1:1..412;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000040.1 Genbank gene 1 412 . + . ID=gene-C9F09_00480;Name=C9F09_00480;end_range=412,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00480;partial=true;start_range=.,1 PYKB01000040.1 Protein Homology CDS 1 412 . + 2 ID=cds-TGD06638.1;Parent=gene-C9F09_00480;Dbxref=NCBI_GP:TGD06638.1;Name=TGD06638.1;Note=catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis;end_range=412,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457822.1;locus_tag=C9F09_00480;partial=true;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=TGD06638.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001076.1 1 411 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001076.1 Genbank region 1 411 . + . ID=PYKB01001076.1:1..411;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001076.1 Genbank gene 1 411 . + . ID=gene-C9F09_17985;Name=relA;end_range=411,.;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=C9F09_17985;partial=true;start_range=.,1 PYKB01001076.1 Protein Homology CDS 1 411 . + 2 ID=cds-TGC86535.1;Parent=gene-C9F09_17985;Dbxref=NCBI_GP:TGC86535.1;Name=TGC86535.1;Note=(p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;end_range=411,.;gbkey=CDS;gene=relA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457352.1;locus_tag=C9F09_17985;partial=true;product=GTP diphosphokinase;protein_id=TGC86535.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000003.1 1 408 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000003.1 Genbank region 1 408 . + . ID=PYKB01000003.1:1..408;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000003.1 Genbank gene 1 408 . + . ID=gene-C9F09_00015;Name=C9F09_00015;end_range=408,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00015;partial=true;start_range=.,1 PYKB01000003.1 Protein Homology CDS 1 408 . + 0 ID=cds-TGD07348.1;Parent=gene-C9F09_00015;Dbxref=NCBI_GP:TGD07348.1;Name=TGD07348.1;end_range=408,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=C9F09_00015;partial=true;product=SLC13 family permease;protein_id=TGD07348.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000170.1 1 405 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000170.1 Genbank region 1 405 . + . ID=PYKB01000170.1:1..405;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000170.1 Genbank gene 1 405 . + . ID=gene-C9F09_01910;Name=C9F09_01910;end_range=405,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01910;partial=true;start_range=.,1 PYKB01000170.1 Protein Homology CDS 1 405 . + 0 ID=cds-TGD04011.1;Parent=gene-C9F09_01910;Dbxref=NCBI_GP:TGD04011.1;Name=TGD04011.1;end_range=405,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456091.1;locus_tag=C9F09_01910;partial=true;product=oxidoreductase;protein_id=TGD04011.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001633.1 1 6821 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001633.1 Genbank region 1 6821 . + . ID=PYKB01001633.1:1..6821;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001633.1 Genbank gene 1 1348 . - . ID=gene-C9F09_28510;Name=C9F09_28510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28510;partial=true;start_range=.,1 PYKB01001633.1 Protein Homology CDS 1 1348 . - 0 ID=cds-TGC73996.1;Parent=gene-C9F09_28510;Dbxref=NCBI_GP:TGC73996.1;Name=TGC73996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=C9F09_28510;partial=true;product=DNA repair protein RecN;protein_id=TGC73996.1;start_range=.,1;transl_table=11 PYKB01001633.1 Genbank gene 1434 2312 . - . ID=gene-C9F09_28515;Name=C9F09_28515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28515 PYKB01001633.1 Protein Homology CDS 1434 2312 . - 0 ID=cds-TGC73997.1;Parent=gene-C9F09_28515;Dbxref=NCBI_GP:TGC73997.1;Name=TGC73997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457152.1;locus_tag=C9F09_28515;product=NAD(+) kinase;protein_id=TGC73997.1;transl_table=11 PYKB01001633.1 Genbank gene 2244 2438 . + . ID=gene-C9F09_28520;Name=C9F09_28520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28520 PYKB01001633.1 Protein Homology CDS 2244 2438 . + 0 ID=cds-TGC74003.1;Parent=gene-C9F09_28520;Dbxref=NCBI_GP:TGC74003.1;Name=TGC74003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449071.1;locus_tag=C9F09_28520;product=molecular chaperone GrpE;protein_id=TGC74003.1;transl_table=11 PYKB01001633.1 Genbank gene 2435 3025 . + . ID=gene-C9F09_28525;Name=C9F09_28525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28525 PYKB01001633.1 Protein Homology CDS 2435 3025 . + 0 ID=cds-TGC73998.1;Parent=gene-C9F09_28525;Dbxref=NCBI_GP:TGC73998.1;Name=TGC73998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457151.1;locus_tag=C9F09_28525;product=nucleotide exchange factor GrpE;protein_id=TGC73998.1;transl_table=11 PYKB01001633.1 Genbank gene 3060 3665 . - . ID=gene-C9F09_28530;Name=C9F09_28530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28530 PYKB01001633.1 Protein Homology CDS 3060 3665 . - 0 ID=cds-TGC73999.1;Parent=gene-C9F09_28530;Dbxref=NCBI_GP:TGC73999.1;Name=TGC73999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=C9F09_28530;product=cytoplasmic protein;protein_id=TGC73999.1;transl_table=11 PYKB01001633.1 Genbank gene 3786 5027 . - . ID=gene-C9F09_28535;Name=C9F09_28535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28535 PYKB01001633.1 Protein Homology CDS 3786 5027 . - 0 ID=cds-TGC74000.1;Parent=gene-C9F09_28535;Dbxref=NCBI_GP:TGC74000.1;Name=TGC74000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457149.3;locus_tag=C9F09_28535;product=magnesium/cobalt efflux protein;protein_id=TGC74000.1;transl_table=11 PYKB01001633.1 Genbank gene 5092 5883 . - . ID=gene-C9F09_28540;Name=C9F09_28540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28540 PYKB01001633.1 Protein Homology CDS 5092 5883 . - 0 ID=cds-TGC74001.1;Parent=gene-C9F09_28540;Dbxref=NCBI_GP:TGC74001.1;Name=TGC74001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457148.1;locus_tag=C9F09_28540;product=inner membrane protein YpjD;protein_id=TGC74001.1;transl_table=11 PYKB01001633.1 Genbank gene 5829 6155 . - . ID=gene-C9F09_28545;Name=C9F09_28545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28545 PYKB01001633.1 Protein Homology CDS 5829 6155 . - 0 ID=cds-TGC74002.1;Parent=gene-C9F09_28545;Dbxref=NCBI_GP:TGC74002.1;Name=TGC74002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001349589.1;locus_tag=C9F09_28545;product=hypothetical protein;protein_id=TGC74002.1;transl_table=11 PYKB01001633.1 Genbank gene 6049 6821 . + . ID=gene-C9F09_28550;Name=C9F09_28550;end_range=6821,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28550;partial=true PYKB01001633.1 Protein Homology CDS 6049 6821 . + 0 ID=cds-TGC74004.1;Parent=gene-C9F09_28550;Dbxref=NCBI_GP:TGC74004.1;Name=TGC74004.1;end_range=6821,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=C9F09_28550;partial=true;product=signal recognition particle protein;protein_id=TGC74004.1;transl_table=11 ##sequence-region PYKB01000164.1 1 402 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000164.1 Genbank region 1 402 . + . ID=PYKB01000164.1:1..402;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000164.1 Genbank pseudogene 47 402 . - . ID=gene-C9F09_01830;Name=C9F09_01830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01830;pseudo=true PYKB01000164.1 Protein Homology CDS 47 402 . - 2 ID=cds-C9F09_01830;Parent=gene-C9F09_01830;Note=catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457822.1;locus_tag=C9F09_01830;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;pseudo=true;transl_table=11 ##sequence-region PYKB01001171.1 1 402 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001171.1 Genbank region 1 402 . + . ID=PYKB01001171.1:1..402;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001171.1 Genbank gene 1 402 . - . ID=gene-C9F09_19785;Name=malS;end_range=402,.;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=C9F09_19785;partial=true;start_range=.,1 PYKB01001171.1 Protein Homology CDS 1 402 . - 2 ID=cds-TGC84303.1;Parent=gene-C9F09_19785;Dbxref=NCBI_GP:TGC84303.1;Name=TGC84303.1;Note=periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds;end_range=402,.;gbkey=CDS;gene=malS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=C9F09_19785;partial=true;product=alpha-amylase;protein_id=TGC84303.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000308.1 1 401 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000308.1 Genbank region 1 401 . + . ID=PYKB01000308.1:1..401;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000308.1 Genbank gene 29 401 . + . ID=gene-C9F09_03460;Name=C9F09_03460;end_range=401,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03460;partial=true PYKB01000308.1 Protein Homology CDS 29 401 . + 0 ID=cds-TGD01396.1;Parent=gene-C9F09_03460;Dbxref=NCBI_GP:TGD01396.1;Name=TGD01396.1;end_range=401,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457304.1;locus_tag=C9F09_03460;partial=true;product=gluconate permease;protein_id=TGD01396.1;transl_table=11 ##sequence-region PYKB01000823.1 1 401 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000823.1 Genbank region 1 401 . + . ID=PYKB01000823.1:1..401;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000823.1 Genbank pseudogene 121 294 . + . ID=gene-C9F09_12970;Name=C9F09_12970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12970;pseudo=true PYKB01000823.1 Protein Homology CDS 121 294 . + 0 ID=cds-C9F09_12970;Parent=gene-C9F09_12970;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611593.1;locus_tag=C9F09_12970;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000593.1 1 400 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000593.1 Genbank region 1 400 . + . ID=PYKB01000593.1:1..400;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000593.1 Genbank pseudogene 83 400 . - . ID=gene-C9F09_08645;Name=C9F09_08645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08645;pseudo=true PYKB01000593.1 Protein Homology CDS 83 400 . - 0 ID=cds-C9F09_08645;Parent=gene-C9F09_08645;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=C9F09_08645;product=formate dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKB01001582.1 1 398 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001582.1 Genbank region 1 398 . + . ID=PYKB01001582.1:1..398;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001582.1 Genbank pseudogene 1 336 . + . ID=gene-C9F09_27805;Name=C9F09_27805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_27805;pseudo=true PYKB01001582.1 Protein Homology CDS 1 336 . + 0 ID=cds-C9F09_27805;Parent=gene-C9F09_27805;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458165.1;locus_tag=C9F09_27805;product=PTS fructose transporter subunit IID;pseudo=true;transl_table=11 ##sequence-region PYKB01000239.1 1 396 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000239.1 Genbank region 1 396 . + . ID=PYKB01000239.1:1..396;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000239.1 Genbank pseudogene 1 339 . - . ID=gene-C9F09_02585;Name=C9F09_02585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02585;pseudo=true PYKB01000239.1 Protein Homology CDS 1 339 . - 0 ID=cds-C9F09_02585;Parent=gene-C9F09_02585;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=C9F09_02585;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001302.1 1 395 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001302.1 Genbank region 1 395 . + . ID=PYKB01001302.1:1..395;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001302.1 Genbank gene 1 249 . - . ID=gene-C9F09_22290;Name=C9F09_22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22290;partial=true;start_range=.,1 PYKB01001302.1 Protein Homology CDS 1 249 . - 0 ID=cds-TGC81550.1;Parent=gene-C9F09_22290;Dbxref=NCBI_GP:TGC81550.1;Name=TGC81550.1;Note=catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457111.1;locus_tag=C9F09_22290;partial=true;product=S26 family signal peptidase;protein_id=TGC81550.1;start_range=.,1;transl_table=11 PYKB01001302.1 Genbank gene 266 395 . - . ID=gene-C9F09_22295;Name=C9F09_22295;end_range=395,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22295;partial=true PYKB01001302.1 Protein Homology CDS 266 395 . - 1 ID=cds-TGC81551.1;Parent=gene-C9F09_22295;Dbxref=NCBI_GP:TGC81551.1;Name=TGC81551.1;end_range=395,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311462.1;locus_tag=C9F09_22295;partial=true;product=hypothetical protein;protein_id=TGC81551.1;transl_table=11 ##sequence-region PYKB01001316.1 1 348 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001316.1 Genbank region 1 348 . + . ID=PYKB01001316.1:1..348;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001316.1 Genbank pseudogene 1 310 . + . ID=gene-C9F09_22625;Name=C9F09_22625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22625;pseudo=true PYKB01001316.1 Protein Homology CDS 1 310 . + 1 ID=cds-C9F09_22625;Parent=gene-C9F09_22625;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457723.1;locus_tag=C9F09_22625;product=cell division protein ZapE;pseudo=true;transl_table=11 ##sequence-region PYKB01000761.1 1 394 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000761.1 Genbank region 1 394 . + . ID=PYKB01000761.1:1..394;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000761.1 Genbank gene 1 394 . + . ID=gene-C9F09_11790;Name=cysG;end_range=394,.;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=C9F09_11790;partial=true;start_range=.,1 PYKB01000761.1 Protein Homology CDS 1 394 . + 0 ID=cds-TGC92709.1;Parent=gene-C9F09_11790;Dbxref=NCBI_GP:TGC92709.1;Name=TGC92709.1;Note=multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin;end_range=394,.;gbkey=CDS;gene=cysG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458425.1;locus_tag=C9F09_11790;partial=true;product=siroheme synthase;protein_id=TGC92709.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000512.1 1 6814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000512.1 Genbank region 1 6814 . + . ID=PYKB01000512.1:1..6814;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000512.1 Genbank gene 1 1203 . + . ID=gene-C9F09_06780;Name=C9F09_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06780;partial=true;start_range=.,1 PYKB01000512.1 Protein Homology CDS 1 1203 . + 0 ID=cds-TGC97307.1;Parent=gene-C9F09_06780;Dbxref=NCBI_GP:TGC97307.1;Name=TGC97307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=C9F09_06780;partial=true;product=DUF1479 domain-containing protein;protein_id=TGC97307.1;start_range=.,1;transl_table=11 PYKB01000512.1 Genbank pseudogene 1324 1407 . - . ID=gene-C9F09_06785;Name=C9F09_06785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_06785;pseudo=true PYKB01000512.1 Protein Homology CDS 1324 1407 . - 0 ID=cds-C9F09_06785;Parent=gene-C9F09_06785;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001578785.1;locus_tag=C9F09_06785;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 PYKB01000512.1 Genbank gene 1407 1568 . + . ID=gene-C9F09_06790;Name=C9F09_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06790 PYKB01000512.1 Protein Homology CDS 1407 1568 . + 0 ID=cds-TGC97311.1;Parent=gene-C9F09_06790;Dbxref=NCBI_GP:TGC97311.1;Name=TGC97311.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08282.10;locus_tag=C9F09_06790;product=hypothetical protein;protein_id=TGC97311.1;transl_table=11 PYKB01000512.1 Genbank gene 1596 2126 . + . ID=gene-C9F09_06795;Name=C9F09_06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06795 PYKB01000512.1 Protein Homology CDS 1596 2126 . + 0 ID=cds-TGC97308.1;Parent=gene-C9F09_06795;Dbxref=NCBI_GP:TGC97308.1;Name=TGC97308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006636150.1;locus_tag=C9F09_06795;product=HAD family hydrolase;protein_id=TGC97308.1;transl_table=11 PYKB01000512.1 Genbank gene 2155 2898 . - . ID=gene-C9F09_06800;Name=C9F09_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06800 PYKB01000512.1 Protein Homology CDS 2155 2898 . - 0 ID=cds-TGC97312.1;Parent=gene-C9F09_06800;Dbxref=NCBI_GP:TGC97312.1;Name=TGC97312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459816.1;locus_tag=C9F09_06800;product=DUF4261 domain-containing protein;protein_id=TGC97312.1;transl_table=11 PYKB01000512.1 Genbank gene 3298 4890 . - . ID=gene-C9F09_06805;Name=C9F09_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06805 PYKB01000512.1 Protein Homology CDS 3298 4890 . - 0 ID=cds-TGC97309.1;Parent=gene-C9F09_06805;Dbxref=NCBI_GP:TGC97309.1;Name=TGC97309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455374.1;locus_tag=C9F09_06805;product=ABC-F family ATPase;protein_id=TGC97309.1;transl_table=11 PYKB01000512.1 Genbank gene 5110 6030 . + . ID=gene-C9F09_06810;Name=C9F09_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06810 PYKB01000512.1 Protein Homology CDS 5110 6030 . + 0 ID=cds-TGC97310.1;Parent=gene-C9F09_06810;Dbxref=NCBI_GP:TGC97310.1;Name=TGC97310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455373.1;locus_tag=C9F09_06810;product=L%2CD-transpeptidase;protein_id=TGC97310.1;transl_table=11 PYKB01000512.1 Genbank gene 6074 6814 . - . ID=gene-C9F09_06815;Name=C9F09_06815;end_range=6814,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06815;partial=true PYKB01000512.1 Protein Homology CDS 6074 6814 . - 0 ID=cds-TGC97313.1;Parent=gene-C9F09_06815;Dbxref=NCBI_GP:TGC97313.1;Name=TGC97313.1;end_range=6814,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455372.1;locus_tag=C9F09_06815;partial=true;product=anion transporter;protein_id=TGC97313.1;transl_table=11 ##sequence-region PYKB01000731.1 1 14823 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000731.1 Genbank region 1 14823 . + . ID=PYKB01000731.1:1..14823;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000731.1 Genbank gene 1 1151 . + . ID=gene-C9F09_11165;Name=C9F09_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11165;partial=true;start_range=.,1 PYKB01000731.1 Protein Homology CDS 1 1151 . + 2 ID=cds-TGC93271.1;Parent=gene-C9F09_11165;Dbxref=NCBI_GP:TGC93271.1;Name=TGC93271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455958.1;locus_tag=C9F09_11165;partial=true;product=sugar transporter;protein_id=TGC93271.1;start_range=.,1;transl_table=11 PYKB01000731.1 Genbank gene 1198 1863 . - . ID=gene-C9F09_11170;Name=C9F09_11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11170 PYKB01000731.1 Protein Homology CDS 1198 1863 . - 0 ID=cds-TGC93272.1;Parent=gene-C9F09_11170;Dbxref=NCBI_GP:TGC93272.1;Name=TGC93272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455959.1;locus_tag=C9F09_11170;product=stress protection protein MarC;protein_id=TGC93272.1;transl_table=11 PYKB01000731.1 Genbank gene 2122 2556 . + . ID=gene-C9F09_11175;Name=C9F09_11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11175 PYKB01000731.1 Protein Homology CDS 2122 2556 . + 0 ID=cds-TGC93273.1;Parent=gene-C9F09_11175;Dbxref=NCBI_GP:TGC93273.1;Name=TGC93273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=C9F09_11175;product=MarR family transcriptional regulator;protein_id=TGC93273.1;transl_table=11 PYKB01000731.1 Genbank gene 2525 2959 . + . ID=gene-C9F09_11180;Name=C9F09_11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11180 PYKB01000731.1 Protein Homology CDS 2525 2959 . + 0 ID=cds-TGC93274.1;Parent=gene-C9F09_11180;Dbxref=NCBI_GP:TGC93274.1;Name=TGC93274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455961.3;locus_tag=C9F09_11180;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=TGC93274.1;transl_table=11 PYKB01000731.1 Genbank gene 2988 3203 . + . ID=gene-C9F09_11185;Name=C9F09_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11185 PYKB01000731.1 Protein Homology CDS 2988 3203 . + 0 ID=cds-TGC93275.1;Parent=gene-C9F09_11185;Dbxref=NCBI_GP:TGC93275.1;Name=TGC93275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455962.1;locus_tag=C9F09_11185;product=multiple antibiotic resistance regulatory periplasmic protein MarB;protein_id=TGC93275.1;transl_table=11 PYKB01000731.1 Genbank gene 3322 4224 . - . ID=gene-C9F09_11190;Name=C9F09_11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11190 PYKB01000731.1 Protein Homology CDS 3322 4224 . - 0 ID=cds-TGC93276.1;Parent=gene-C9F09_11190;Dbxref=NCBI_GP:TGC93276.1;Name=TGC93276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455963.1;locus_tag=C9F09_11190;product=O-acetylserine/cysteine exporter;protein_id=TGC93276.1;transl_table=11 PYKB01000731.1 Genbank gene 4452 5639 . + . ID=gene-C9F09_11195;Name=C9F09_11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11195 PYKB01000731.1 Protein Homology CDS 4452 5639 . + 0 ID=cds-TGC93277.1;Parent=gene-C9F09_11195;Dbxref=NCBI_GP:TGC93277.1;Name=TGC93277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=C9F09_11195;product=transporter;protein_id=TGC93277.1;transl_table=11 PYKB01000731.1 Genbank gene 5887 5982 . + . ID=gene-C9F09_11200;Name=C9F09_11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11200 PYKB01000731.1 Protein Homology CDS 5887 5982 . + 0 ID=cds-TGC93278.1;Parent=gene-C9F09_11200;Dbxref=NCBI_GP:TGC93278.1;Name=TGC93278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=C9F09_11200;product=hypothetical protein;protein_id=TGC93278.1;transl_table=11 PYKB01000731.1 Genbank gene 6330 6722 . - . ID=gene-C9F09_11205;Name=C9F09_11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11205 PYKB01000731.1 Protein Homology CDS 6330 6722 . - 0 ID=cds-TGC93279.1;Parent=gene-C9F09_11205;Dbxref=NCBI_GP:TGC93279.1;Name=TGC93279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=C9F09_11205;product=TIGR00156 family protein;protein_id=TGC93279.1;transl_table=11 PYKB01000731.1 Genbank gene 7148 7675 . + . ID=gene-C9F09_11210;Name=C9F09_11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11210 PYKB01000731.1 Protein Homology CDS 7148 7675 . + 0 ID=cds-TGC93280.1;Parent=gene-C9F09_11210;Dbxref=NCBI_GP:TGC93280.1;Name=TGC93280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=C9F09_11210;product=competence protein ComA;protein_id=TGC93280.1;transl_table=11 PYKB01000731.1 Genbank gene 7795 7977 . - . ID=gene-C9F09_11215;Name=C9F09_11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11215 PYKB01000731.1 Protein Homology CDS 7795 7977 . - 0 ID=cds-TGC93286.1;Parent=gene-C9F09_11215;Dbxref=NCBI_GP:TGC93286.1;Name=TGC93286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455967.1;locus_tag=C9F09_11215;product=stress-induced acidophilic repeat motif-containing protein;protein_id=TGC93286.1;transl_table=11 PYKB01000731.1 Genbank pseudogene 8109 8243 . - . ID=gene-C9F09_11220;Name=C9F09_11220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11220;pseudo=true PYKB01000731.1 Protein Homology CDS 8109 8243 . - 0 ID=cds-C9F09_11220;Parent=gene-C9F09_11220;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344059.1;locus_tag=C9F09_11220;product=peptidyl-dipeptidase dcp;pseudo=true;transl_table=11 PYKB01000731.1 Genbank gene 8322 10364 . - . ID=gene-C9F09_11225;Name=C9F09_11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11225 PYKB01000731.1 Protein Homology CDS 8322 10364 . - 0 ID=cds-TGC93281.1;Parent=gene-C9F09_11225;Dbxref=NCBI_GP:TGC93281.1;Name=TGC93281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=C9F09_11225;product=peptidyl-dipeptidase Dcp;protein_id=TGC93281.1;transl_table=11 PYKB01000731.1 Genbank gene 10503 11249 . + . ID=gene-C9F09_11230;Name=C9F09_11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11230 PYKB01000731.1 Protein Homology CDS 10503 11249 . + 0 ID=cds-TGC93282.1;Parent=gene-C9F09_11230;Dbxref=NCBI_GP:TGC93282.1;Name=TGC93282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455969.1;locus_tag=C9F09_11230;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=TGC93282.1;transl_table=11 PYKB01000731.1 Genbank gene 11379 12065 . + . ID=gene-C9F09_11235;Name=C9F09_11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11235 PYKB01000731.1 Protein Homology CDS 11379 12065 . + 0 ID=cds-TGC93283.1;Parent=gene-C9F09_11235;Dbxref=NCBI_GP:TGC93283.1;Name=TGC93283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455970.1;locus_tag=C9F09_11235;product=GntR family transcriptional regulator;protein_id=TGC93283.1;transl_table=11 PYKB01000731.1 Genbank gene 12246 12449 . + . ID=gene-C9F09_11240;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=C9F09_11240 PYKB01000731.1 Protein Homology CDS 12246 12449 . + 0 ID=cds-TGC93284.1;Parent=gene-C9F09_11240;Dbxref=NCBI_GP:TGC93284.1;Name=TGC93284.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455971.1;locus_tag=C9F09_11240;product=putative selenium delivery protein YdfZ;protein_id=TGC93284.1;transl_table=11 PYKB01000731.1 Genbank gene 12516 13982 . - . ID=gene-C9F09_11245;Name=C9F09_11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11245 PYKB01000731.1 Protein Homology CDS 12516 13982 . - 0 ID=cds-TGC93285.1;Parent=gene-C9F09_11245;Dbxref=NCBI_GP:TGC93285.1;Name=TGC93285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=C9F09_11245;product=mannitol dehydrogenase family protein;protein_id=TGC93285.1;transl_table=11 PYKB01000731.1 Genbank pseudogene 14126 14823 . - . ID=gene-C9F09_11250;Name=C9F09_11250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11250;pseudo=true PYKB01000731.1 Protein Homology CDS 14126 14823 . - 2 ID=cds-C9F09_11250;Parent=gene-C9F09_11250;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455973.1;locus_tag=C9F09_11250;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKB01000019.1 1 393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000019.1 Genbank region 1 393 . + . ID=PYKB01000019.1:1..393;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000019.1 Genbank pseudogene 73 252 . + . ID=gene-C9F09_00220;Name=C9F09_00220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00220;pseudo=true PYKB01000019.1 Protein Homology CDS 73 252 . + 0 ID=cds-C9F09_00220;Parent=gene-C9F09_00220;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000667713.1;locus_tag=C9F09_00220;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000136.1 1 392 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000136.1 Genbank region 1 392 . + . ID=PYKB01000136.1:1..392;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000136.1 Genbank gene 133 231 . + . ID=gene-C9F09_01555;Name=C9F09_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01555 PYKB01000136.1 Protein Homology CDS 133 231 . + 0 ID=cds-TGD04743.1;Parent=gene-C9F09_01555;Dbxref=NCBI_GP:TGD04743.1;Name=TGD04743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=C9F09_01555;product=IlvGMEDA operon leader peptide;protein_id=TGD04743.1;transl_table=11 ##sequence-region PYKB01000769.1 1 392 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000769.1 Genbank region 1 392 . + . ID=PYKB01000769.1:1..392;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000769.1 Genbank gene 1 197 . - . ID=gene-C9F09_11940;Name=C9F09_11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11940;partial=true;start_range=.,1 PYKB01000769.1 Protein Homology CDS 1 197 . - 0 ID=cds-TGC92634.1;Parent=gene-C9F09_11940;Dbxref=NCBI_GP:TGC92634.1;Name=TGC92634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455408.1;locus_tag=C9F09_11940;partial=true;product=DUF2593 domain-containing protein;protein_id=TGC92634.1;start_range=.,1;transl_table=11 PYKB01000769.1 Genbank pseudogene 271 348 . - . ID=gene-C9F09_11945;Name=C9F09_11945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11945;pseudo=true PYKB01000769.1 Protein Homology CDS 271 348 . - 0 ID=cds-C9F09_11945;Parent=gene-C9F09_11945;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415378.1;locus_tag=C9F09_11945;product=putrescine/spermidine ABC transporter permease;pseudo=true;transl_table=11 ##sequence-region PYKB01000033.1 1 392 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000033.1 Genbank region 1 392 . + . ID=PYKB01000033.1:1..392;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000033.1 Genbank pseudogene 89 392 . - . ID=gene-C9F09_00410;Name=C9F09_00410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00410;pseudo=true PYKB01000033.1 Protein Homology CDS 89 392 . - 1 ID=cds-C9F09_00410;Parent=gene-C9F09_00410;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454740.1;locus_tag=C9F09_00410;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000334.1 1 390 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000334.1 Genbank region 1 390 . + . ID=PYKB01000334.1:1..390;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000334.1 Genbank gene 1 390 . + . ID=gene-C9F09_03690;Name=C9F09_03690;end_range=390,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03690;partial=true;start_range=.,1 PYKB01000334.1 Protein Homology CDS 1 390 . + 1 ID=cds-TGD00852.1;Parent=gene-C9F09_03690;Dbxref=NCBI_GP:TGD00852.1;Name=TGD00852.1;Note=catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine;end_range=390,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455337.1;locus_tag=C9F09_03690;partial=true;product=8-amino-7-oxononanoate synthase;protein_id=TGD00852.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000415.1 1 386 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000415.1 Genbank region 1 386 . + . ID=PYKB01000415.1:1..386;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000415.1 Genbank gene 1 386 . - . ID=gene-C9F09_04750;Name=C9F09_04750;end_range=386,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04750;partial=true;start_range=.,1 PYKB01000415.1 Protein Homology CDS 1 386 . - 1 ID=cds-TGC99351.1;Parent=gene-C9F09_04750;Dbxref=NCBI_GP:TGC99351.1;Name=TGC99351.1;end_range=386,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=C9F09_04750;partial=true;product=C4-dicarboxylate ABC transporter;protein_id=TGC99351.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001600.1 1 385 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001600.1 Genbank region 1 385 . + . ID=PYKB01001600.1:1..385;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001600.1 Genbank gene 1 385 . - . ID=gene-C9F09_28100;Name=C9F09_28100;end_range=385,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28100;partial=true;start_range=.,1 PYKB01001600.1 Protein Homology CDS 1 385 . - 0 ID=cds-TGC74812.1;Parent=gene-C9F09_28100;Dbxref=NCBI_GP:TGC74812.1;Name=TGC74812.1;end_range=385,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459348.1;locus_tag=C9F09_28100;partial=true;product=ATPase;protein_id=TGC74812.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000979.1 1 381 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000979.1 Genbank region 1 381 . + . ID=PYKB01000979.1:1..381;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000979.1 Genbank gene 1 142 . + . ID=gene-C9F09_16230;Name=C9F09_16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16230;partial=true;start_range=.,1 PYKB01000979.1 Protein Homology CDS 1 142 . + 1 ID=cds-TGC88669.1;Parent=gene-C9F09_16230;Dbxref=NCBI_GP:TGC88669.1;Name=TGC88669.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=C9F09_16230;partial=true;product=3-oxoacyl-ACP synthase;protein_id=TGC88669.1;start_range=.,1;transl_table=11 PYKB01000979.1 Genbank gene 158 381 . + . ID=gene-C9F09_16235;Name=C9F09_16235;end_range=381,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16235;partial=true PYKB01000979.1 Protein Homology CDS 158 381 . + 0 ID=cds-TGC88670.1;Parent=gene-C9F09_16235;Dbxref=NCBI_GP:TGC88670.1;Name=TGC88670.1;end_range=381,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455687.1;locus_tag=C9F09_16235;partial=true;product=malonyl CoA-acyl carrier protein transacylase;protein_id=TGC88670.1;transl_table=11 ##sequence-region PYKB01000349.1 1 380 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000349.1 Genbank region 1 380 . + . ID=PYKB01000349.1:1..380;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000349.1 Genbank pseudogene 1 94 . + . ID=gene-C9F09_03925;Name=C9F09_03925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03925;pseudo=true PYKB01000349.1 Protein Homology CDS 1 94 . + 1 ID=cds-C9F09_03925;Parent=gene-C9F09_03925;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014850790.1;locus_tag=C9F09_03925;product=heparin-binding hemagglutinin;pseudo=true;transl_table=11 PYKB01000349.1 Genbank pseudogene 93 380 . - . ID=gene-C9F09_03930;Name=C9F09_03930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03930;pseudo=true PYKB01000349.1 Protein Homology CDS 93 380 . - 0 ID=cds-C9F09_03930;Parent=gene-C9F09_03930;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747946.1;locus_tag=C9F09_03930;product=surface-exposed virulence protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000322.1 1 380 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000322.1 Genbank region 1 380 . + . ID=PYKB01000322.1:1..380;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000322.1 Genbank gene 1 259 . + . ID=gene-C9F09_03605;Name=C9F09_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03605;partial=true;start_range=.,1 PYKB01000322.1 Protein Homology CDS 1 259 . + 1 ID=cds-TGD01116.1;Parent=gene-C9F09_03605;Dbxref=NCBI_GP:TGD01116.1;Name=TGD01116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920493.1;locus_tag=C9F09_03605;partial=true;product=peptidylprolyl isomerase A;protein_id=TGD01116.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000425.1 1 6780 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000425.1 Genbank region 1 6780 . + . ID=PYKB01000425.1:1..6780;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000425.1 Genbank gene 1 434 . - . ID=gene-C9F09_04980;Name=C9F09_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04980;partial=true;start_range=.,1 PYKB01000425.1 Protein Homology CDS 1 434 . - 0 ID=cds-TGC99105.1;Parent=gene-C9F09_04980;Dbxref=NCBI_GP:TGC99105.1;Name=TGC99105.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=C9F09_04980;partial=true;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=TGC99105.1;start_range=.,1;transl_table=11 PYKB01000425.1 Genbank gene 447 3929 . - . ID=gene-C9F09_04985;Name=C9F09_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04985 PYKB01000425.1 Protein Homology CDS 447 3929 . - 0 ID=cds-TGC99106.1;Parent=gene-C9F09_04985;Dbxref=NCBI_GP:TGC99106.1;Name=TGC99106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454838.1;locus_tag=C9F09_04985;product=DNA polymerase III subunit alpha;protein_id=TGC99106.1;transl_table=11 PYKB01000425.1 Genbank gene 3953 4549 . - . ID=gene-C9F09_04990;Name=C9F09_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04990 PYKB01000425.1 Protein Homology CDS 3953 4549 . - 0 ID=cds-TGC99107.1;Parent=gene-C9F09_04990;Dbxref=NCBI_GP:TGC99107.1;Name=TGC99107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454837.1;locus_tag=C9F09_04990;product=ribonuclease HII;protein_id=TGC99107.1;transl_table=11 PYKB01000425.1 Genbank gene 4546 5694 . - . ID=gene-C9F09_04995;Name=C9F09_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04995 PYKB01000425.1 Protein Homology CDS 4546 5694 . - 0 ID=cds-TGC99108.1;Parent=gene-C9F09_04995;Dbxref=NCBI_GP:TGC99108.1;Name=TGC99108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454836.1;locus_tag=C9F09_04995;product=lipid-A-disaccharide synthase;protein_id=TGC99108.1;transl_table=11 PYKB01000425.1 Genbank gene 5694 6482 . - . ID=gene-C9F09_05000;Name=C9F09_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05000 PYKB01000425.1 Protein Homology CDS 5694 6482 . - 0 ID=cds-TGC99109.1;Parent=gene-C9F09_05000;Dbxref=NCBI_GP:TGC99109.1;Name=TGC99109.1;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=C9F09_05000;product=acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase;protein_id=TGC99109.1;transl_table=11 PYKB01000425.1 Genbank gene 6486 6780 . - . ID=gene-C9F09_05005;Name=C9F09_05005;end_range=6780,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05005;partial=true PYKB01000425.1 Protein Homology CDS 6486 6780 . - 1 ID=cds-TGC99110.1;Parent=gene-C9F09_05005;Dbxref=NCBI_GP:TGC99110.1;Name=TGC99110.1;end_range=6780,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=C9F09_05005;partial=true;product=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ;protein_id=TGC99110.1;transl_table=11 ##sequence-region PYKB01000395.1 1 377 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000395.1 Genbank region 1 377 . + . ID=PYKB01000395.1:1..377;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000395.1 Genbank pseudogene 45 377 . - . ID=gene-C9F09_04415;Name=C9F09_04415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04415;pseudo=true PYKB01000395.1 Protein Homology CDS 45 377 . - 0 ID=cds-C9F09_04415;Parent=gene-C9F09_04415;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455687.1;locus_tag=C9F09_04415;product=ACP S-malonyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKB01001240.1 1 377 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001240.1 Genbank region 1 377 . + . ID=PYKB01001240.1:1..377;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001240.1 Genbank gene 76 377 . + . ID=gene-C9F09_21130;Name=C9F09_21130;end_range=377,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21130;partial=true PYKB01001240.1 Protein Homology CDS 76 377 . + 0 ID=cds-TGC82658.1;Parent=gene-C9F09_21130;Dbxref=NCBI_GP:TGC82658.1;Name=TGC82658.1;end_range=377,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458413.1;locus_tag=C9F09_21130;partial=true;product=hypothetical protein;protein_id=TGC82658.1;transl_table=11 ##sequence-region PYKB01000524.1 1 375 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000524.1 Genbank region 1 375 . + . ID=PYKB01000524.1:1..375;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000524.1 Genbank gene 1 375 . + . ID=gene-C9F09_07060;Name=C9F09_07060;end_range=375,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07060;partial=true;start_range=.,1 PYKB01000524.1 Protein Homology CDS 1 375 . + 2 ID=cds-TGC97104.1;Parent=gene-C9F09_07060;Dbxref=NCBI_GP:TGC97104.1;Name=TGC97104.1;Note=catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose;end_range=375,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458267.1;locus_tag=C9F09_07060;partial=true;product=xylulokinase;protein_id=TGC97104.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001589.1 1 375 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001589.1 Genbank region 1 375 . + . ID=PYKB01001589.1:1..375;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001589.1 Genbank pseudogene 107 375 . + . ID=gene-C9F09_27920;Name=rumB;gbkey=Gene;gene=rumB;gene_biotype=pseudogene;locus_tag=C9F09_27920;pseudo=true PYKB01001589.1 Protein Homology CDS 107 375 . + 0 ID=cds-C9F09_27920;Parent=gene-C9F09_27920;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=rumB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455409.1;locus_tag=C9F09_27920;product=23S rRNA (uracil(747)-C(5))-methyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKB01001629.1 1 375 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001629.1 Genbank region 1 375 . + . ID=PYKB01001629.1:1..375;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001629.1 Genbank pseudogene 1 375 . + . ID=gene-C9F09_28480;Name=C9F09_28480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28480;pseudo=true PYKB01001629.1 Protein Homology CDS 1 375 . + 2 ID=cds-C9F09_28480;Parent=gene-C9F09_28480;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455783.1;locus_tag=C9F09_28480;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000854.1 1 374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000854.1 Genbank region 1 374 . + . ID=PYKB01000854.1:1..374;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000854.1 Genbank gene 1 374 . + . ID=gene-C9F09_13600;Name=C9F09_13600;end_range=374,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13600;partial=true;start_range=.,1 PYKB01000854.1 Protein Homology CDS 1 374 . + 1 ID=cds-TGC91179.1;Parent=gene-C9F09_13600;Dbxref=NCBI_GP:TGC91179.1;Name=TGC91179.1;end_range=374,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044774.1;locus_tag=C9F09_13600;partial=true;product=hypothetical protein;protein_id=TGC91179.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000470.1 1 374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000470.1 Genbank region 1 374 . + . ID=PYKB01000470.1:1..374;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000470.1 Genbank gene 1 356 . + . ID=gene-C9F09_05895;Name=C9F09_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05895;partial=true;start_range=.,1 PYKB01000470.1 Protein Homology CDS 1 356 . + 2 ID=cds-TGC98280.1;Parent=gene-C9F09_05895;Dbxref=NCBI_GP:TGC98280.1;Name=TGC98280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455388.1;locus_tag=C9F09_05895;partial=true;product=oxidoreductase;protein_id=TGC98280.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000010.1 1 374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000010.1 Genbank region 1 374 . + . ID=PYKB01000010.1:1..374;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000010.1 Genbank gene 1 374 . + . ID=gene-C9F09_00100;Name=C9F09_00100;end_range=374,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00100;partial=true;start_range=.,1 PYKB01000010.1 Protein Homology CDS 1 374 . + 1 ID=cds-TGD07245.1;Parent=gene-C9F09_00100;Dbxref=NCBI_GP:TGD07245.1;Name=TGD07245.1;end_range=374,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458263.1;locus_tag=C9F09_00100;partial=true;product=hypothetical protein;protein_id=TGD07245.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000035.1 1 374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000035.1 Genbank region 1 374 . + . ID=PYKB01000035.1:1..374;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000035.1 Genbank gene 1 374 . - . ID=gene-C9F09_00430;Name=C9F09_00430;end_range=374,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00430;partial=true;start_range=.,1 PYKB01000035.1 Protein Homology CDS 1 374 . - 0 ID=cds-TGD06772.1;Parent=gene-C9F09_00430;Dbxref=NCBI_GP:TGD06772.1;Name=TGD06772.1;end_range=374,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454751.1;locus_tag=C9F09_00430;partial=true;product=LysR family transcriptional regulator;protein_id=TGD06772.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001482.1 1 373 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001482.1 Genbank region 1 373 . + . ID=PYKB01001482.1:1..373;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001482.1 Genbank gene 16 373 . + . ID=gene-C9F09_25745;Name=C9F09_25745;end_range=373,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25745;partial=true PYKB01001482.1 Protein Homology CDS 16 373 . + 0 ID=cds-TGC77625.1;Parent=gene-C9F09_25745;Dbxref=NCBI_GP:TGC77625.1;Name=TGC77625.1;end_range=373,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=C9F09_25745;partial=true;product=J domain-containing protein;protein_id=TGC77625.1;transl_table=11 ##sequence-region PYKB01000812.1 1 6779 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000812.1 Genbank region 1 6779 . + . ID=PYKB01000812.1:1..6779;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000812.1 Genbank gene 353 2314 . - . ID=gene-C9F09_12645;Name=C9F09_12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12645 PYKB01000812.1 Protein Homology CDS 353 2314 . - 0 ID=cds-TGC92005.1;Parent=gene-C9F09_12645;Dbxref=NCBI_GP:TGC92005.1;Name=TGC92005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=C9F09_12645;product=oxidoreductase FeS-binding subunit;protein_id=TGC92005.1;transl_table=11 PYKB01000812.1 Genbank pseudogene 2222 2465 . + . ID=gene-C9F09_12650;Name=C9F09_12650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12650;pseudo=true PYKB01000812.1 Protein Homology CDS 2222 2465 . + 0 ID=cds-C9F09_12650;Parent=gene-C9F09_12650;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572207.1;locus_tag=C9F09_12650;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000812.1 Genbank gene 2500 4200 . + . ID=gene-C9F09_12655;Name=C9F09_12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12655 PYKB01000812.1 Protein Homology CDS 2500 4200 . + 0 ID=cds-TGC92006.1;Parent=gene-C9F09_12655;Dbxref=NCBI_GP:TGC92006.1;Name=TGC92006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=C9F09_12655;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=TGC92006.1;transl_table=11 PYKB01000812.1 Genbank gene 4385 6779 . + . ID=gene-C9F09_12660;Name=C9F09_12660;end_range=6779,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12660;partial=true PYKB01000812.1 Protein Homology CDS 4385 6779 . + 0 ID=cds-TGC92007.1;Parent=gene-C9F09_12660;Dbxref=NCBI_GP:TGC92007.1;Name=TGC92007.1;end_range=6779,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=C9F09_12660;partial=true;product=hypothetical protein;protein_id=TGC92007.1;transl_table=11 ##sequence-region PYKB01001022.1 1 372 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001022.1 Genbank region 1 372 . + . ID=PYKB01001022.1:1..372;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001022.1 Genbank pseudogene 1 347 . + . ID=gene-C9F09_17070;Name=C9F09_17070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17070;pseudo=true PYKB01001022.1 Protein Homology CDS 1 347 . + 2 ID=cds-C9F09_17070;Parent=gene-C9F09_17070;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001462364.1;locus_tag=C9F09_17070;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001510.1 1 371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001510.1 Genbank region 1 371 . + . ID=PYKB01001510.1:1..371;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001510.1 Genbank pseudogene 73 371 . + . ID=gene-C9F09_26225;Name=C9F09_26225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_26225;pseudo=true PYKB01001510.1 Protein Homology CDS 73 371 . + 0 ID=cds-C9F09_26225;Parent=gene-C9F09_26225;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458196.3;locus_tag=C9F09_26225;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;pseudo=true;transl_table=11 ##sequence-region PYKB01001247.1 1 369 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001247.1 Genbank region 1 369 . + . ID=PYKB01001247.1:1..369;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001247.1 Genbank pseudogene 73 276 . + . ID=gene-C9F09_21255;Name=C9F09_21255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21255;pseudo=true PYKB01001247.1 Protein Homology CDS 73 276 . + 0 ID=cds-C9F09_21255;Parent=gene-C9F09_21255;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458411.3;locus_tag=C9F09_21255;product=penicillin-binding protein 1A;pseudo=true;transl_table=11 ##sequence-region PYKB01000163.1 1 369 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000163.1 Genbank region 1 369 . + . ID=PYKB01000163.1:1..369;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000163.1 Genbank pseudogene 1 305 . - . ID=gene-C9F09_01825;Name=C9F09_01825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01825;pseudo=true PYKB01000163.1 Protein Homology CDS 1 305 . - 0 ID=cds-C9F09_01825;Parent=gene-C9F09_01825;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454775.1;locus_tag=C9F09_01825;product=dihydrodipicolinate synthase;pseudo=true;transl_table=11 ##sequence-region PYKB01000476.1 1 364 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000476.1 Genbank region 1 364 . + . ID=PYKB01000476.1:1..364;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000476.1 Genbank gene 1 364 . - . ID=gene-C9F09_05980;Name=C9F09_05980;end_range=364,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05980;partial=true;start_range=.,1 PYKB01000476.1 Protein Homology CDS 1 364 . - 2 ID=cds-TGC98216.1;Parent=gene-C9F09_05980;Dbxref=NCBI_GP:TGC98216.1;Name=TGC98216.1;Note=invasion protein InvC%3B necessary for efficient entry of S.typhimurium into cultured epithelial cells%3B probable catalytic subunit of a protein translocase;end_range=364,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457288.1;locus_tag=C9F09_05980;partial=true;product=EscN/YscN/HrcN family type III secretion system ATPase;protein_id=TGC98216.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000450.1 1 363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000450.1 Genbank region 1 363 . + . ID=PYKB01000450.1:1..363;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000450.1 Genbank gene 1 363 . - . ID=gene-C9F09_05605;Name=C9F09_05605;end_range=363,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05605;partial=true;start_range=.,1 PYKB01000450.1 Protein Homology CDS 1 363 . - 2 ID=cds-TGC98640.1;Parent=gene-C9F09_05605;Dbxref=NCBI_GP:TGC98640.1;Name=TGC98640.1;end_range=363,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9F09_05605;partial=true;product=hypothetical protein;protein_id=TGC98640.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000335.1 1 360 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000335.1 Genbank region 1 360 . + . ID=PYKB01000335.1:1..360;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000335.1 Genbank gene 1 358 . - . ID=gene-C9F09_03695;Name=C9F09_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03695;partial=true;start_range=.,1 PYKB01000335.1 Protein Homology CDS 1 358 . - 0 ID=cds-TGD00845.1;Parent=gene-C9F09_03695;Dbxref=NCBI_GP:TGD00845.1;Name=TGD00845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001775374.1;locus_tag=C9F09_03695;partial=true;product=aromatic amino acid aminotransferase;protein_id=TGD00845.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001553.1 1 359 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001553.1 Genbank region 1 359 . + . ID=PYKB01001553.1:1..359;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001553.1 Genbank gene 1 359 . + . ID=gene-C9F09_27135;Name=C9F09_27135;end_range=359,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27135;partial=true;start_range=.,1 PYKB01001553.1 Protein Homology CDS 1 359 . + 2 ID=cds-TGC75951.1;Parent=gene-C9F09_27135;Dbxref=NCBI_GP:TGC75951.1;Name=TGC75951.1;Note=decatenates replicating daughter chromosomes;end_range=359,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456214.1;locus_tag=C9F09_27135;partial=true;product=DNA topoisomerase III;protein_id=TGC75951.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000492.1 1 356 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000492.1 Genbank region 1 356 . + . ID=PYKB01000492.1:1..356;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000492.1 Genbank gene 1 356 . + . ID=gene-C9F09_06220;Name=C9F09_06220;end_range=356,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06220;partial=true;start_range=.,1 PYKB01000492.1 Protein Homology CDS 1 356 . + 1 ID=cds-TGC97838.1;Parent=gene-C9F09_06220;Dbxref=NCBI_GP:TGC97838.1;Name=TGC97838.1;end_range=356,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454857.1;locus_tag=C9F09_06220;partial=true;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=TGC97838.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001595.1 1 355 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001595.1 Genbank region 1 355 . + . ID=PYKB01001595.1:1..355;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001595.1 Genbank gene 1 355 . + . ID=gene-C9F09_28060;Name=C9F09_28060;end_range=355,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28060;partial=true;start_range=.,1 PYKB01001595.1 Protein Homology CDS 1 355 . + 0 ID=cds-TGC74966.1;Parent=gene-C9F09_28060;Dbxref=NCBI_GP:TGC74966.1;Name=TGC74966.1;end_range=355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=C9F09_28060;partial=true;product=MFS transporter;protein_id=TGC74966.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000633.1 1 6766 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000633.1 Genbank region 1 6766 . + . ID=PYKB01000633.1:1..6766;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000633.1 Genbank gene 281 739 . - . ID=gene-C9F09_09420;Name=C9F09_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09420 PYKB01000633.1 Protein Homology CDS 281 739 . - 0 ID=cds-TGC94663.1;Parent=gene-C9F09_09420;Dbxref=NCBI_GP:TGC94663.1;Name=TGC94663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458564.1;locus_tag=C9F09_09420;product=redox-sensitive transcriptional activator SoxR;protein_id=TGC94663.1;transl_table=11 PYKB01000633.1 Genbank gene 826 1149 . + . ID=gene-C9F09_09425;Name=C9F09_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09425 PYKB01000633.1 Protein Homology CDS 826 1149 . + 0 ID=cds-TGC94664.1;Parent=gene-C9F09_09425;Dbxref=NCBI_GP:TGC94664.1;Name=TGC94664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=C9F09_09425;product=regulatory protein SoxS;protein_id=TGC94664.1;transl_table=11 PYKB01000633.1 Genbank gene 1137 2738 . - . ID=gene-C9F09_09430;Name=C9F09_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09430 PYKB01000633.1 Protein Homology CDS 1137 2738 . - 0 ID=cds-TGC94665.1;Parent=gene-C9F09_09430;Dbxref=NCBI_GP:TGC94665.1;Name=TGC94665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=C9F09_09430;product=EAL domain-containing protein;protein_id=TGC94665.1;transl_table=11 PYKB01000633.1 Genbank gene 3300 3581 . + . ID=gene-C9F09_09435;Name=C9F09_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09435 PYKB01000633.1 Protein Homology CDS 3300 3581 . + 0 ID=cds-TGC94666.1;Parent=gene-C9F09_09435;Dbxref=NCBI_GP:TGC94666.1;Name=TGC94666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458561.1;locus_tag=C9F09_09435;product=hypothetical protein;protein_id=TGC94666.1;transl_table=11 PYKB01000633.1 Genbank gene 3859 5925 . - . ID=gene-C9F09_09440;Name=C9F09_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09440 PYKB01000633.1 Protein Homology CDS 3859 5925 . - 0 ID=cds-TGC94667.1;Parent=gene-C9F09_09440;Dbxref=NCBI_GP:TGC94667.1;Name=TGC94667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458560.1;locus_tag=C9F09_09440;product=antibiotic ABC transporter ATP-binding protein;protein_id=TGC94667.1;transl_table=11 PYKB01000633.1 Genbank gene 5965 6766 . - . ID=gene-C9F09_09445;Name=C9F09_09445;end_range=6766,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09445;partial=true PYKB01000633.1 Protein Homology CDS 5965 6766 . - 1 ID=cds-TGC94668.1;Parent=gene-C9F09_09445;Dbxref=NCBI_GP:TGC94668.1;Name=TGC94668.1;end_range=6766,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458559.1;locus_tag=C9F09_09445;partial=true;product=hypothetical protein;protein_id=TGC94668.1;transl_table=11 ##sequence-region PYKB01001101.1 1 354 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001101.1 Genbank region 1 354 . + . ID=PYKB01001101.1:1..354;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001101.1 Genbank pseudogene 1 283 . + . ID=gene-C9F09_18450;Name=C9F09_18450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18450;pseudo=true PYKB01001101.1 Protein Homology CDS 1 283 . + 1 ID=cds-C9F09_18450;Parent=gene-C9F09_18450;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156609.1;locus_tag=C9F09_18450;product=phosphatidate cytidylyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKB01001750.1 1 351 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001750.1 Genbank region 1 351 . + . ID=PYKB01001750.1:1..351;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001750.1 Genbank gene 1 246 . - . ID=gene-C9F09_30675;Name=C9F09_30675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30675;partial=true;start_range=.,1 PYKB01001750.1 Protein Homology CDS 1 246 . - 0 ID=cds-TGC70441.1;Parent=gene-C9F09_30675;Dbxref=NCBI_GP:TGC70441.1;Name=TGC70441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455902.1;locus_tag=C9F09_30675;partial=true;product=hypothetical protein;protein_id=TGC70441.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001729.1 1 351 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001729.1 Genbank region 1 351 . + . ID=PYKB01001729.1:1..351;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001729.1 Genbank pseudogene 1 281 . + . ID=gene-C9F09_30300;Name=C9F09_30300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_30300;pseudo=true PYKB01001729.1 Protein Homology CDS 1 281 . + 2 ID=cds-C9F09_30300;Parent=gene-C9F09_30300;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=C9F09_30300;product=multifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase;pseudo=true;transl_table=11 ##sequence-region PYKB01000095.1 1 350 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000095.1 Genbank region 1 350 . + . ID=PYKB01000095.1:1..350;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000095.1 Genbank gene 1 350 . - . ID=gene-C9F09_01120;Name=C9F09_01120;end_range=350,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01120;partial=true;start_range=.,1 PYKB01000095.1 Protein Homology CDS 1 350 . - 0 ID=cds-TGD05584.1;Parent=gene-C9F09_01120;Dbxref=NCBI_GP:TGD05584.1;Name=TGD05584.1;end_range=350,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=C9F09_01120;partial=true;product=hemagglutinin;protein_id=TGD05584.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000986.1 1 350 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000986.1 Genbank region 1 350 . + . ID=PYKB01000986.1:1..350;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000986.1 Genbank gene 1 350 . - . ID=gene-C9F09_16440;Name=C9F09_16440;end_range=350,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16440;partial=true;start_range=.,1 PYKB01000986.1 Protein Homology CDS 1 350 . - 0 ID=cds-TGC88437.1;Parent=gene-C9F09_16440;Dbxref=NCBI_GP:TGC88437.1;Name=TGC88437.1;end_range=350,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454620.1;locus_tag=C9F09_16440;partial=true;product=hypothetical protein;protein_id=TGC88437.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001529.1 1 349 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001529.1 Genbank region 1 349 . + . ID=PYKB01001529.1:1..349;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001529.1 Genbank gene 1 349 . - . ID=gene-C9F09_26620;Name=C9F09_26620;end_range=349,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26620;partial=true;start_range=.,1 PYKB01001529.1 Protein Homology CDS 1 349 . - 2 ID=cds-TGC76493.1;Parent=gene-C9F09_26620;Dbxref=NCBI_GP:TGC76493.1;Name=TGC76493.1;end_range=349,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=C9F09_26620;partial=true;product=sugar ABC transporter ATP-binding protein;protein_id=TGC76493.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000346.1 1 347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000346.1 Genbank region 1 347 . + . ID=PYKB01000346.1:1..347;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000346.1 Genbank gene 26 347 . + . ID=gene-C9F09_03895;Name=C9F09_03895;end_range=347,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03895;partial=true PYKB01000346.1 Protein Homology CDS 26 347 . + 0 ID=cds-TGD00607.1;Parent=gene-C9F09_03895;Dbxref=NCBI_GP:TGD00607.1;Name=TGD00607.1;end_range=347,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456765.1;locus_tag=C9F09_03895;partial=true;product=MFS transporter;protein_id=TGD00607.1;transl_table=11 ##sequence-region PYKB01001565.1 1 346 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001565.1 Genbank region 1 346 . + . ID=PYKB01001565.1:1..346;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001565.1 Genbank gene 1 346 . - . ID=gene-C9F09_27320;Name=C9F09_27320;end_range=346,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27320;partial=true;start_range=.,1 PYKB01001565.1 Protein Homology CDS 1 346 . - 1 ID=cds-TGC75660.1;Parent=gene-C9F09_27320;Dbxref=NCBI_GP:TGC75660.1;Name=TGC75660.1;end_range=346,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=C9F09_27320;partial=true;product=MFS transporter;protein_id=TGC75660.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001224.1 1 345 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001224.1 Genbank region 1 345 . + . ID=PYKB01001224.1:1..345;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001224.1 Genbank pseudogene 1 287 . + . ID=gene-C9F09_20735;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=pseudogene;locus_tag=C9F09_20735;pseudo=true PYKB01001224.1 Protein Homology CDS 1 287 . + 2 ID=cds-C9F09_20735;Parent=gene-C9F09_20735;Note=catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=glpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311152.1;locus_tag=C9F09_20735;product=glycerol-3-phosphate transporter;pseudo=true;transl_table=11 ##sequence-region PYKB01000193.1 1 344 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000193.1 Genbank region 1 344 . + . ID=PYKB01000193.1:1..344;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000193.1 Genbank pseudogene 11 344 . + . ID=gene-C9F09_02150;Name=C9F09_02150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02150;pseudo=true PYKB01000193.1 Protein Homology CDS 11 344 . + 0 ID=cds-C9F09_02150;Parent=gene-C9F09_02150;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=C9F09_02150;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001367.1 1 6765 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001367.1 Genbank region 1 6765 . + . ID=PYKB01001367.1:1..6765;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001367.1 Genbank pseudogene 1 1653 . + . ID=gene-C9F09_23470;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=pseudogene;locus_tag=C9F09_23470;pseudo=true PYKB01001367.1 Protein Homology CDS 1 1653 . + 0 ID=cds-C9F09_23470;Parent=gene-C9F09_23470;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=alaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457220.1;locus_tag=C9F09_23470;product=alanine--tRNA ligase;pseudo=true;transl_table=11 PYKB01001367.1 Genbank gene 1888 2073 . + . ID=gene-C9F09_23475;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=C9F09_23475 PYKB01001367.1 Protein Homology CDS 1888 2073 . + 0 ID=cds-TGC80213.1;Parent=gene-C9F09_23475;Dbxref=NCBI_GP:TGC80213.1;Name=TGC80213.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=C9F09_23475;product=carbon storage regulator;protein_id=TGC80213.1;transl_table=11 PYKB01001367.1 Genbank gene 2086 2361 . - . ID=gene-C9F09_23480;Name=C9F09_23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23480 PYKB01001367.1 Protein Homology CDS 2086 2361 . - 0 ID=cds-TGC80214.1;Parent=gene-C9F09_23480;Dbxref=NCBI_GP:TGC80214.1;Name=TGC80214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328872.1%2CRefSeq:WP_012219151.1;locus_tag=C9F09_23480;product=hypothetical protein;protein_id=TGC80214.1;transl_table=11 PYKB01001367.1 Genbank gene 2377 2469 . + . ID=gene-C9F09_23485;Name=C9F09_23485;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_23485 PYKB01001367.1 tRNAscan-SE tRNA 2377 2469 . + . ID=rna-C9F09_23485;Parent=gene-C9F09_23485;anticodon=(pos:2411..2413);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_23485;product=tRNA-Ser PYKB01001367.1 tRNAscan-SE exon 2377 2469 . + . ID=exon-C9F09_23485-1;Parent=rna-C9F09_23485;anticodon=(pos:2411..2413);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_23485;product=tRNA-Ser PYKB01001367.1 Genbank gene 2473 2549 . + . ID=gene-C9F09_23490;Name=C9F09_23490;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_23490 PYKB01001367.1 tRNAscan-SE tRNA 2473 2549 . + . ID=rna-C9F09_23490;Parent=gene-C9F09_23490;anticodon=(pos:2507..2509);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_23490;product=tRNA-Arg PYKB01001367.1 tRNAscan-SE exon 2473 2549 . + . ID=exon-C9F09_23490-1;Parent=rna-C9F09_23490;anticodon=(pos:2507..2509);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_23490;product=tRNA-Arg PYKB01001367.1 Genbank gene 2611 2687 . + . ID=gene-C9F09_23495;Name=C9F09_23495;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_23495 PYKB01001367.1 tRNAscan-SE tRNA 2611 2687 . + . ID=rna-C9F09_23495;Parent=gene-C9F09_23495;anticodon=(pos:2645..2647);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_23495;product=tRNA-Arg PYKB01001367.1 tRNAscan-SE exon 2611 2687 . + . ID=exon-C9F09_23495-1;Parent=rna-C9F09_23495;anticodon=(pos:2645..2647);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_23495;product=tRNA-Arg PYKB01001367.1 Genbank gene 2923 3489 . + . ID=gene-C9F09_23500;Name=C9F09_23500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23500 PYKB01001367.1 Protein Homology CDS 2923 3489 . + 0 ID=cds-TGC80215.1;Parent=gene-C9F09_23500;Dbxref=NCBI_GP:TGC80215.1;Name=TGC80215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457218.1;locus_tag=C9F09_23500;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=TGC80215.1;transl_table=11 PYKB01001367.1 Genbank gene 3486 3911 . + . ID=gene-C9F09_23505;Name=C9F09_23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23505 PYKB01001367.1 Protein Homology CDS 3486 3911 . + 0 ID=cds-TGC80216.1;Parent=gene-C9F09_23505;Dbxref=NCBI_GP:TGC80216.1;Name=TGC80216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457217.1;locus_tag=C9F09_23505;product=DedA family protein;protein_id=TGC80216.1;transl_table=11 PYKB01001367.1 Genbank gene 3988 5544 . + . ID=gene-C9F09_23510;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=C9F09_23510 PYKB01001367.1 Protein Homology CDS 3988 5544 . + 0 ID=cds-TGC80217.1;Parent=gene-C9F09_23510;Dbxref=NCBI_GP:TGC80217.1;Name=TGC80217.1;gbkey=CDS;gene=gshA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=C9F09_23510;product=glutamate--cysteine ligase;protein_id=TGC80217.1;transl_table=11 PYKB01001367.1 Genbank gene 5694 6209 . + . ID=gene-C9F09_23515;Name=C9F09_23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23515 PYKB01001367.1 Protein Homology CDS 5694 6209 . + 0 ID=cds-TGC80218.1;Parent=gene-C9F09_23515;Dbxref=NCBI_GP:TGC80218.1;Name=TGC80218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461743.1;locus_tag=C9F09_23515;product=S-ribosylhomocysteine lyase;protein_id=TGC80218.1;transl_table=11 PYKB01001367.1 Genbank gene 6555 6765 . + . ID=gene-C9F09_23520;Name=C9F09_23520;end_range=6765,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23520;partial=true PYKB01001367.1 Protein Homology CDS 6555 6765 . + 0 ID=cds-TGC80219.1;Parent=gene-C9F09_23520;Dbxref=NCBI_GP:TGC80219.1;Name=TGC80219.1;end_range=6765,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=C9F09_23520;partial=true;product=porin;protein_id=TGC80219.1;transl_table=11 ##sequence-region PYKB01000447.1 1 343 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000447.1 Genbank region 1 343 . + . ID=PYKB01000447.1:1..343;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000447.1 Genbank pseudogene 74 334 . - . ID=gene-C9F09_05555;Name=C9F09_05555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05555;pseudo=true PYKB01000447.1 Protein Homology CDS 74 334 . - 0 ID=cds-C9F09_05555;Parent=gene-C9F09_05555;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001508025.1;locus_tag=C9F09_05555;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000620.1 1 342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000620.1 Genbank region 1 342 . + . ID=PYKB01000620.1:1..342;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000620.1 Genbank gene 119 194 . + . ID=gene-C9F09_09210;Name=C9F09_09210;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_09210 PYKB01000620.1 tRNAscan-SE tRNA 119 194 . + . ID=rna-C9F09_09210;Parent=gene-C9F09_09210;anticodon=(pos:153..155);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_09210;product=tRNA-Glu PYKB01000620.1 tRNAscan-SE exon 119 194 . + . ID=exon-C9F09_09210-1;Parent=rna-C9F09_09210;anticodon=(pos:153..155);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_09210;product=tRNA-Glu ##sequence-region PYKB01000456.1 1 342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000456.1 Genbank region 1 342 . + . ID=PYKB01000456.1:1..342;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000456.1 Genbank gene 1 342 . + . ID=gene-C9F09_05680;Name=flgK;end_range=342,.;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=C9F09_05680;partial=true;start_range=.,1 PYKB01000456.1 Protein Homology CDS 1 342 . + 0 ID=cds-TGC98511.1;Parent=gene-C9F09_05680;Dbxref=NCBI_GP:TGC98511.1;Name=TGC98511.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;end_range=342,.;gbkey=CDS;gene=flgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455676.1;locus_tag=C9F09_05680;partial=true;product=flagellar hook-associated protein FlgK;protein_id=TGC98511.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000328.1 1 342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000328.1 Genbank region 1 342 . + . ID=PYKB01000328.1:1..342;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000328.1 Genbank gene 1 342 . + . ID=gene-C9F09_03650;Name=C9F09_03650;end_range=342,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03650;partial=true;start_range=.,1 PYKB01000328.1 Protein Homology CDS 1 342 . + 0 ID=cds-TGD00993.1;Parent=gene-C9F09_03650;Dbxref=NCBI_GP:TGD00993.1;Name=TGD00993.1;end_range=342,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454990.1;locus_tag=C9F09_03650;partial=true;product=DNA exonuclease SbcCD subunit SbcD;protein_id=TGD00993.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001392.1 1 342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001392.1 Genbank region 1 342 . + . ID=PYKB01001392.1:1..342;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001392.1 Genbank pseudogene 1 280 . - . ID=gene-C9F09_23945;Name=C9F09_23945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23945;pseudo=true PYKB01001392.1 Protein Homology CDS 1 280 . - 0 ID=cds-C9F09_23945;Parent=gene-C9F09_23945;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=C9F09_23945;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000370.1 1 339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000370.1 Genbank region 1 339 . + . ID=PYKB01000370.1:1..339;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000370.1 Genbank gene 143 339 . - . ID=gene-C9F09_04200;Name=C9F09_04200;end_range=339,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04200;partial=true PYKB01000370.1 Protein Homology CDS 143 339 . - 2 ID=cds-TGD00123.1;Parent=gene-C9F09_04200;Dbxref=NCBI_GP:TGD00123.1;Name=TGD00123.1;Note=catalyzes the addition of the acetyl moity of acetyl-CoA to an N-hydroxy-arylamine to form an N-acetoxyarylamine;end_range=339,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=C9F09_04200;partial=true;product=N-hydroxyarylamine O-acetyltransferase;protein_id=TGD00123.1;transl_table=11 ##sequence-region PYKB01001021.1 1 339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001021.1 Genbank region 1 339 . + . ID=PYKB01001021.1:1..339;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001021.1 Genbank gene 1 339 . + . ID=gene-C9F09_17065;Name=C9F09_17065;end_range=339,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17065;partial=true;start_range=.,1 PYKB01001021.1 Protein Homology CDS 1 339 . + 2 ID=cds-TGC87791.1;Parent=gene-C9F09_17065;Dbxref=NCBI_GP:TGC87791.1;Name=TGC87791.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;end_range=339,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=C9F09_17065;partial=true;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=TGC87791.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000978.1 1 339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000978.1 Genbank region 1 339 . + . ID=PYKB01000978.1:1..339;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea ##sequence-region PYKB01000360.1 1 337 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000360.1 Genbank region 1 337 . + . ID=PYKB01000360.1:1..337;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000360.1 Genbank gene 1 337 . - . ID=gene-C9F09_04065;Name=hslU;end_range=337,.;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=C9F09_04065;partial=true;start_range=.,1 PYKB01000360.1 Protein Homology CDS 1 337 . - 0 ID=cds-TGD00280.1;Parent=gene-C9F09_04065;Dbxref=NCBI_GP:TGD00280.1;Name=TGD00280.1;Note=heat shock protein involved in degradation of misfolded proteins;end_range=337,.;gbkey=CDS;gene=hslU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=C9F09_04065;partial=true;product=HslU--HslV peptidase ATPase subunit;protein_id=TGD00280.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001342.1 1 335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001342.1 Genbank region 1 335 . + . ID=PYKB01001342.1:1..335;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001342.1 Genbank gene 1 88 . - . ID=gene-C9F09_23120;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F09_23120;partial=true;start_range=.,1 PYKB01001342.1 cmsearch rRNA 1 88 . - . ID=rna-C9F09_23120;Parent=gene-C9F09_23120;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00001,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_23120;partial=true;product=5S ribosomal RNA;start_range=.,1 PYKB01001342.1 cmsearch exon 1 88 . - . ID=exon-C9F09_23120-1;Parent=rna-C9F09_23120;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00001,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_23120;partial=true;product=5S ribosomal RNA;start_range=.,1 PYKB01001342.1 Genbank gene 273 335 . - . ID=gene-C9F09_23125;Name=C9F09_23125;end_range=335,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F09_23125;partial=true PYKB01001342.1 Genbank rRNA 273 335 . - . ID=rna-C9F09_23125;Parent=gene-C9F09_23125;end_range=335,.;gbkey=rRNA;locus_tag=C9F09_23125;partial=true;product=23S ribosomal RNA PYKB01001342.1 Genbank exon 273 335 . - . ID=exon-C9F09_23125-1;Parent=rna-C9F09_23125;end_range=335,.;gbkey=rRNA;locus_tag=C9F09_23125;partial=true;product=23S ribosomal RNA ##sequence-region PYKB01001493.1 1 6753 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001493.1 Genbank region 1 6753 . + . ID=PYKB01001493.1:1..6753;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001493.1 Genbank gene 1 379 . - . ID=gene-C9F09_25925;Name=C9F09_25925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25925;partial=true;start_range=.,1 PYKB01001493.1 Protein Homology CDS 1 379 . - 0 ID=cds-TGC77417.1;Parent=gene-C9F09_25925;Dbxref=NCBI_GP:TGC77417.1;Name=TGC77417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456654.1;locus_tag=C9F09_25925;partial=true;product=colanic acid biosynthesis glycosyltransferase WcaI;protein_id=TGC77417.1;start_range=.,1;transl_table=11 PYKB01001493.1 Genbank gene 376 849 . - . ID=gene-C9F09_25930;Name=C9F09_25930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25930 PYKB01001493.1 Protein Homology CDS 376 849 . - 0 ID=cds-TGC77418.1;Parent=gene-C9F09_25930;Dbxref=NCBI_GP:TGC77418.1;Name=TGC77418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461052.3;locus_tag=C9F09_25930;product=GDP-mannose mannosyl hydrolase;protein_id=TGC77418.1;transl_table=11 PYKB01001493.1 Genbank gene 852 1817 . - . ID=gene-C9F09_25935;Name=C9F09_25935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25935 PYKB01001493.1 Protein Homology CDS 852 1817 . - 0 ID=cds-TGC77419.1;Parent=gene-C9F09_25935;Dbxref=NCBI_GP:TGC77419.1;Name=TGC77419.1;Note=bifunctional GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase%3Bcatalyzes the formation of GDP-fucose from GDP-4-dehydro-6-deoxy-D-mannose;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456656.1;locus_tag=C9F09_25935;product=GDP-fucose synthetase;protein_id=TGC77419.1;transl_table=11 PYKB01001493.1 Genbank gene 1820 2941 . - . ID=gene-C9F09_25940;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=C9F09_25940 PYKB01001493.1 Protein Homology CDS 1820 2941 . - 0 ID=cds-TGC77420.1;Parent=gene-C9F09_25940;Dbxref=NCBI_GP:TGC77420.1;Name=TGC77420.1;gbkey=CDS;gene=gmd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=C9F09_25940;product=GDP-mannose 4%2C6-dehydratase;protein_id=TGC77420.1;transl_table=11 PYKB01001493.1 Genbank gene 2965 3519 . - . ID=gene-C9F09_25945;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=C9F09_25945 PYKB01001493.1 Protein Homology CDS 2965 3519 . - 0 ID=cds-TGC77421.1;Parent=gene-C9F09_25945;Dbxref=NCBI_GP:TGC77421.1;Name=TGC77421.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=C9F09_25945;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=TGC77421.1;transl_table=11 PYKB01001493.1 Genbank gene 3535 4281 . - . ID=gene-C9F09_25950;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=C9F09_25950 PYKB01001493.1 Protein Homology CDS 3535 4281 . - 0 ID=cds-TGC77422.1;Parent=gene-C9F09_25950;Dbxref=NCBI_GP:TGC77422.1;Name=TGC77422.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456659.1;locus_tag=C9F09_25950;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=TGC77422.1;transl_table=11 PYKB01001493.1 Genbank gene 4294 5508 . - . ID=gene-C9F09_25955;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=C9F09_25955 PYKB01001493.1 Protein Homology CDS 4294 5508 . - 0 ID=cds-TGC77423.1;Parent=gene-C9F09_25955;Dbxref=NCBI_GP:TGC77423.1;Name=TGC77423.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=C9F09_25955;product=putative colanic acid polymerase WcaD;protein_id=TGC77423.1;transl_table=11 PYKB01001493.1 Genbank gene 5483 6700 . - . ID=gene-C9F09_25960;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=C9F09_25960 PYKB01001493.1 Protein Homology CDS 5483 6700 . - 0 ID=cds-TGC77424.1;Parent=gene-C9F09_25960;Dbxref=NCBI_GP:TGC77424.1;Name=TGC77424.1;gbkey=CDS;gene=wcaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456660.1;locus_tag=C9F09_25960;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=TGC77424.1;transl_table=11 ##sequence-region PYKB01001216.1 1 334 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001216.1 Genbank region 1 334 . + . ID=PYKB01001216.1:1..334;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001216.1 Genbank gene 1 334 . - . ID=gene-C9F09_20690;Name=C9F09_20690;end_range=334,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20690;partial=true;start_range=.,1 PYKB01001216.1 Protein Homology CDS 1 334 . - 1 ID=cds-TGC83075.1;Parent=gene-C9F09_20690;Dbxref=NCBI_GP:TGC83075.1;Name=TGC83075.1;Note=converts protoheme IX and farnesyl diphosphate to heme O;end_range=334,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455036.1;locus_tag=C9F09_20690;partial=true;product=protoheme IX farnesyltransferase;protein_id=TGC83075.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000061.1 1 334 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000061.1 Genbank region 1 334 . + . ID=PYKB01000061.1:1..334;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000061.1 Genbank gene 1 334 . - . ID=gene-C9F09_00680;Name=C9F09_00680;end_range=334,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00680;partial=true;start_range=.,1 PYKB01000061.1 Protein Homology CDS 1 334 . - 0 ID=cds-TGD06251.1;Parent=gene-C9F09_00680;Dbxref=NCBI_GP:TGD06251.1;Name=TGD06251.1;end_range=334,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455198.1;locus_tag=C9F09_00680;partial=true;product=hypothetical protein;protein_id=TGD06251.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001166.1 1 332 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001166.1 Genbank region 1 332 . + . ID=PYKB01001166.1:1..332;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001166.1 Genbank pseudogene 59 332 . - . ID=gene-C9F09_19740;Name=argS;gbkey=Gene;gene=argS;gene_biotype=pseudogene;locus_tag=C9F09_19740;pseudo=true PYKB01001166.1 Protein Homology CDS 59 332 . - 1 ID=cds-C9F09_19740;Parent=gene-C9F09_19740;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=argS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=C9F09_19740;product=arginine--tRNA ligase;pseudo=true;transl_table=11 ##sequence-region PYKB01000468.1 1 332 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000468.1 Genbank region 1 332 . + . ID=PYKB01000468.1:1..332;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000468.1 Genbank gene 1 332 . + . ID=gene-C9F09_05855;Name=C9F09_05855;end_range=332,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05855;partial=true;start_range=.,1 PYKB01000468.1 Protein Homology CDS 1 332 . + 2 ID=cds-TGC98339.1;Parent=gene-C9F09_05855;Dbxref=NCBI_GP:TGC98339.1;Name=TGC98339.1;end_range=332,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457051.1;locus_tag=C9F09_05855;partial=true;product=ribosome biogenesis GTPase Der;protein_id=TGC98339.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000384.1 1 330 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000384.1 Genbank region 1 330 . + . ID=PYKB01000384.1:1..330;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000384.1 Genbank gene 1 330 . + . ID=gene-C9F09_04345;Name=C9F09_04345;end_range=330,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04345;partial=true;start_range=.,1 PYKB01000384.1 Protein Homology CDS 1 330 . + 2 ID=cds-TGC99920.1;Parent=gene-C9F09_04345;Dbxref=NCBI_GP:TGC99920.1;Name=TGC99920.1;Note=predicted SAM-dependent methyltransferase;end_range=330,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458324.1;locus_tag=C9F09_04345;partial=true;product=16S rRNA (guanine(1516)-N(2))-methyltransferase;protein_id=TGC99920.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000075.1 1 329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000075.1 Genbank region 1 329 . + . ID=PYKB01000075.1:1..329;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000075.1 Genbank gene 1 329 . - . ID=gene-C9F09_00885;Name=C9F09_00885;end_range=329,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00885;partial=true;start_range=.,1 PYKB01000075.1 Protein Homology CDS 1 329 . - 1 ID=cds-TGD05921.1;Parent=gene-C9F09_00885;Dbxref=NCBI_GP:TGD05921.1;Name=TGD05921.1;end_range=329,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=C9F09_00885;partial=true;product=hypothetical protein;protein_id=TGD05921.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000087.1 1 329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000087.1 Genbank region 1 329 . + . ID=PYKB01000087.1:1..329;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000087.1 Genbank gene 1 329 . - . ID=gene-C9F09_01040;Name=flgK;end_range=329,.;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=C9F09_01040;partial=true;start_range=.,1 PYKB01000087.1 Protein Homology CDS 1 329 . - 2 ID=cds-TGD05715.1;Parent=gene-C9F09_01040;Dbxref=NCBI_GP:TGD05715.1;Name=TGD05715.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;end_range=329,.;gbkey=CDS;gene=flgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455676.1;locus_tag=C9F09_01040;partial=true;product=flagellar hook-associated protein FlgK;protein_id=TGD05715.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000378.1 1 329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000378.1 Genbank region 1 329 . + . ID=PYKB01000378.1:1..329;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000378.1 Genbank pseudogene 7 300 . - . ID=gene-C9F09_04295;Name=C9F09_04295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04295;pseudo=true PYKB01000378.1 Protein Homology CDS 7 300 . - 0 ID=cds-C9F09_04295;Parent=gene-C9F09_04295;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=C9F09_04295;product=DNA repair protein RadA;pseudo=true;transl_table=11 ##sequence-region PYKB01001358.1 1 328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001358.1 Genbank region 1 328 . + . ID=PYKB01001358.1:1..328;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001358.1 Genbank gene 1 328 . - . ID=gene-C9F09_23350;Name=C9F09_23350;end_range=328,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F09_23350;partial=true;start_range=.,1 PYKB01001358.1 Genbank rRNA 1 328 . - . ID=rna-C9F09_23350;Parent=gene-C9F09_23350;end_range=328,.;gbkey=rRNA;locus_tag=C9F09_23350;partial=true;product=23S ribosomal RNA;start_range=.,1 PYKB01001358.1 Genbank exon 1 328 . - . ID=exon-C9F09_23350-1;Parent=rna-C9F09_23350;end_range=328,.;gbkey=rRNA;locus_tag=C9F09_23350;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region PYKB01000742.1 1 328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000742.1 Genbank region 1 328 . + . ID=PYKB01000742.1:1..328;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000742.1 Genbank gene 99 290 . + . ID=gene-C9F09_11450;Name=C9F09_11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11450 PYKB01000742.1 Protein Homology CDS 99 290 . + 0 ID=cds-TGC93081.1;Parent=gene-C9F09_11450;Dbxref=NCBI_GP:TGC93081.1;Name=TGC93081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=C9F09_11450;product=DUF2556 domain-containing protein;protein_id=TGC93081.1;transl_table=11 ##sequence-region PYKB01000420.1 1 6746 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000420.1 Genbank region 1 6746 . + . ID=PYKB01000420.1:1..6746;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000420.1 Genbank gene 1 281 . + . ID=gene-C9F09_04825;Name=C9F09_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04825;partial=true;start_range=.,1 PYKB01000420.1 Protein Homology CDS 1 281 . + 2 ID=cds-TGC99232.1;Parent=gene-C9F09_04825;Dbxref=NCBI_GP:TGC99232.1;Name=TGC99232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458582.1;locus_tag=C9F09_04825;partial=true;product=glutamate/aspartate:proton symporter GltP;protein_id=TGC99232.1;start_range=.,1;transl_table=11 PYKB01000420.1 Genbank gene 439 1128 . - . ID=gene-C9F09_04830;Name=C9F09_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04830 PYKB01000420.1 Protein Homology CDS 439 1128 . - 0 ID=cds-TGC99233.1;Parent=gene-C9F09_04830;Dbxref=NCBI_GP:TGC99233.1;Name=TGC99233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=C9F09_04830;product=hypothetical protein;protein_id=TGC99233.1;transl_table=11 PYKB01000420.1 Genbank gene 1305 3452 . - . ID=gene-C9F09_04835;Name=C9F09_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04835 PYKB01000420.1 Protein Homology CDS 1305 3452 . - 0 ID=cds-TGC99234.1;Parent=gene-C9F09_04835;Dbxref=NCBI_GP:TGC99234.1;Name=TGC99234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458584.1;locus_tag=C9F09_04835;product=formate dehydrogenase subunit alpha;protein_id=TGC99234.1;transl_except=(pos:complement(3033..3035)%2Caa:Sec);transl_table=11 PYKB01000420.1 Genbank gene 3807 4715 . - . ID=gene-C9F09_04840;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=C9F09_04840 PYKB01000420.1 Protein Homology CDS 3807 4715 . - 0 ID=cds-TGC99235.1;Parent=gene-C9F09_04840;Dbxref=NCBI_GP:TGC99235.1;Name=TGC99235.1;gbkey=CDS;gene=lpxO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=C9F09_04840;product=lipid A hydroxylase LpxO;protein_id=TGC99235.1;transl_table=11 PYKB01000420.1 Genbank gene 4893 5798 . - . ID=gene-C9F09_04845;Name=C9F09_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04845 PYKB01000420.1 Protein Homology CDS 4893 5798 . - 0 ID=cds-TGC99236.1;Parent=gene-C9F09_04845;Dbxref=NCBI_GP:TGC99236.1;Name=TGC99236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418508.1;locus_tag=C9F09_04845;product=allose kinase;protein_id=TGC99236.1;transl_table=11 PYKB01000420.1 Genbank gene 5782 6477 . - . ID=gene-C9F09_04850;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=C9F09_04850 PYKB01000420.1 Protein Homology CDS 5782 6477 . - 0 ID=cds-TGC99237.1;Parent=gene-C9F09_04850;Dbxref=NCBI_GP:TGC99237.1;Name=TGC99237.1;gbkey=CDS;gene=rpe;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418509.1;locus_tag=C9F09_04850;product=ribulose-phosphate 3-epimerase;protein_id=TGC99237.1;transl_table=11 PYKB01000420.1 Genbank pseudogene 6488 6746 . - . ID=gene-C9F09_04855;Name=C9F09_04855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04855;pseudo=true PYKB01000420.1 Protein Homology CDS 6488 6746 . - 1 ID=cds-C9F09_04855;Parent=gene-C9F09_04855;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418510.1;locus_tag=C9F09_04855;product=allose ABC transporter;pseudo=true;transl_table=11 ##sequence-region PYKB01000227.1 1 327 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000227.1 Genbank region 1 327 . + . ID=PYKB01000227.1:1..327;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000227.1 Genbank gene 120 327 . + . ID=gene-C9F09_02455;Name=C9F09_02455;end_range=327,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02455;partial=true PYKB01000227.1 Protein Homology CDS 120 327 . + 0 ID=cds-TGD03169.1;Parent=gene-C9F09_02455;Dbxref=NCBI_GP:TGD03169.1;Name=TGD03169.1;end_range=327,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457476.1;locus_tag=C9F09_02455;partial=true;product=transketolase;protein_id=TGD03169.1;transl_table=11 ##sequence-region PYKB01001514.1 1 327 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001514.1 Genbank region 1 327 . + . ID=PYKB01001514.1:1..327;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001514.1 Genbank gene 1 327 . - . ID=gene-C9F09_26270;Name=C9F09_26270;end_range=327,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26270;partial=true;start_range=.,1 PYKB01001514.1 Protein Homology CDS 1 327 . - 2 ID=cds-TGC76859.1;Parent=gene-C9F09_26270;Dbxref=NCBI_GP:TGC76859.1;Name=TGC76859.1;Note=cell invasion protein B%3B required for entry of the bacteria into the host cell%3B induces apoptosis in macrophages;end_range=327,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457279.1;locus_tag=C9F09_26270;partial=true;product=pathogenicity island 1 effector protein SipB;protein_id=TGC76859.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000332.1 1 326 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000332.1 Genbank region 1 326 . + . ID=PYKB01000332.1:1..326;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000332.1 Genbank pseudogene 114 290 . + . ID=gene-C9F09_03685;Name=C9F09_03685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03685;pseudo=true PYKB01000332.1 Protein Homology CDS 114 290 . + 0 ID=cds-C9F09_03685;Parent=gene-C9F09_03685;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=C9F09_03685;product=flagellar brake protein YcgR;pseudo=true;transl_table=11 ##sequence-region PYKB01000018.1 1 326 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000018.1 Genbank region 1 326 . + . ID=PYKB01000018.1:1..326;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000018.1 Genbank pseudogene 168 251 . - . ID=gene-C9F09_00215;Name=C9F09_00215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00215;pseudo=true PYKB01000018.1 Protein Homology CDS 168 251 . - 0 ID=cds-C9F09_00215;Parent=gene-C9F09_00215;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=C9F09_00215;product=phosphonate ABC transporter permease;pseudo=true;transl_table=11 ##sequence-region PYKB01000326.1 1 325 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000326.1 Genbank region 1 325 . + . ID=PYKB01000326.1:1..325;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000326.1 Genbank gene 195 325 . + . ID=gene-C9F09_03630;Name=C9F09_03630;end_range=325,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03630;partial=true PYKB01000326.1 Protein Homology CDS 195 325 . + 0 ID=cds-TGD01052.1;Parent=gene-C9F09_03630;Dbxref=NCBI_GP:TGD01052.1;Name=TGD01052.1;end_range=325,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308615.1;locus_tag=C9F09_03630;partial=true;product=YmiA family putative membrane protein;protein_id=TGD01052.1;transl_table=11 ##sequence-region PYKB01001532.1 1 324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001532.1 Genbank region 1 324 . + . ID=PYKB01001532.1:1..324;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001532.1 Genbank gene 1 324 . - . ID=gene-C9F09_26650;Name=C9F09_26650;end_range=324,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26650;partial=true;start_range=.,1 PYKB01001532.1 Protein Homology CDS 1 324 . - 2 ID=cds-TGC76431.1;Parent=gene-C9F09_26650;Dbxref=NCBI_GP:TGC76431.1;Name=TGC76431.1;end_range=324,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456098.1;locus_tag=C9F09_26650;partial=true;product=endopeptidase;protein_id=TGC76431.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000226.1 1 324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000226.1 Genbank region 1 324 . + . ID=PYKB01000226.1:1..324;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000226.1 Genbank gene 1 324 . + . ID=gene-C9F09_02450;Name=C9F09_02450;end_range=324,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02450;partial=true;start_range=.,1 PYKB01000226.1 Protein Homology CDS 1 324 . + 1 ID=cds-TGD03176.1;Parent=gene-C9F09_02450;Dbxref=NCBI_GP:TGD03176.1;Name=TGD03176.1;end_range=324,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457732.1;locus_tag=C9F09_02450;partial=true;product=cation transporter;protein_id=TGD03176.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001128.1 1 324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001128.1 Genbank region 1 324 . + . ID=PYKB01001128.1:1..324;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001128.1 Genbank gene 68 324 . + . ID=gene-C9F09_19000;Name=rumA;end_range=324,.;gbkey=Gene;gene=rumA;gene_biotype=protein_coding;locus_tag=C9F09_19000;partial=true PYKB01001128.1 Protein Homology CDS 68 324 . + 0 ID=cds-TGC85262.1;Parent=gene-C9F09_19000;Dbxref=NCBI_GP:TGC85262.1;Name=TGC85262.1;Note=in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA%3B binds an iron-sulfur cluster [4Fe-4S];end_range=324,.;gbkey=CDS;gene=rumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457353.1;locus_tag=C9F09_19000;partial=true;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=TGC85262.1;transl_table=11 ##sequence-region PYKB01000004.1 1 323 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000004.1 Genbank region 1 323 . + . ID=PYKB01000004.1:1..323;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000004.1 Genbank gene 1 323 . + . ID=gene-C9F09_00020;Name=C9F09_00020;end_range=323,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00020;partial=true;start_range=.,1 PYKB01000004.1 Protein Homology CDS 1 323 . + 0 ID=cds-TGD07346.1;Parent=gene-C9F09_00020;Dbxref=NCBI_GP:TGD07346.1;Name=TGD07346.1;Note=required for the formation of active formate dehydrogenase;end_range=323,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=C9F09_00020;partial=true;product=formate dehydrogenase accessory protein FdhE;protein_id=TGD07346.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000385.1 1 321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000385.1 Genbank region 1 321 . + . ID=PYKB01000385.1:1..321;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000385.1 Genbank gene 1 321 . - . ID=gene-C9F09_04350;Name=C9F09_04350;end_range=321,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04350;partial=true;start_range=.,1 PYKB01000385.1 Protein Homology CDS 1 321 . - 2 ID=cds-TGC99911.1;Parent=gene-C9F09_04350;Dbxref=NCBI_GP:TGC99911.1;Name=TGC99911.1;end_range=321,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457354.1;locus_tag=C9F09_04350;partial=true;product=two-component sensor histidine kinase BarA;protein_id=TGC99911.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000514.1 1 6727 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000514.1 Genbank region 1 6727 . + . ID=PYKB01000514.1:1..6727;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000514.1 Genbank pseudogene 51 686 . - . ID=gene-C9F09_06830;Name=C9F09_06830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_06830;pseudo=true PYKB01000514.1 Protein Homology CDS 51 686 . - 0 ID=cds-C9F09_06830;Parent=gene-C9F09_06830;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460251.1;locus_tag=C9F09_06830;product=PrkA family serine protein kinase;pseudo=true;transl_table=11 PYKB01000514.1 Genbank gene 1112 1858 . + . ID=gene-C9F09_06835;Name=C9F09_06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06835 PYKB01000514.1 Protein Homology CDS 1112 1858 . + 0 ID=cds-TGC97272.1;Parent=gene-C9F09_06835;Dbxref=NCBI_GP:TGC97272.1;Name=TGC97272.1;Note=scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456225.1;locus_tag=C9F09_06835;product=MltA-interacting protein MipA;protein_id=TGC97272.1;transl_table=11 PYKB01000514.1 Genbank gene 2148 3344 . + . ID=gene-C9F09_06840;Name=C9F09_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06840 PYKB01000514.1 Protein Homology CDS 2148 3344 . + 0 ID=cds-TGC97273.1;Parent=gene-C9F09_06840;Dbxref=NCBI_GP:TGC97273.1;Name=TGC97273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=C9F09_06840;product=anaerobic sulfatase maturase;protein_id=TGC97273.1;transl_table=11 PYKB01000514.1 Genbank gene 3441 4298 . + . ID=gene-C9F09_06845;Name=C9F09_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06845 PYKB01000514.1 Protein Homology CDS 3441 4298 . + 0 ID=cds-TGC97274.1;Parent=gene-C9F09_06845;Dbxref=NCBI_GP:TGC97274.1;Name=TGC97274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=C9F09_06845;product=aldo/keto reductase;protein_id=TGC97274.1;transl_table=11 PYKB01000514.1 Genbank gene 4397 5281 . - . ID=gene-C9F09_06850;Name=C9F09_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06850 PYKB01000514.1 Protein Homology CDS 4397 5281 . - 0 ID=cds-TGC97275.1;Parent=gene-C9F09_06850;Dbxref=NCBI_GP:TGC97275.1;Name=TGC97275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=C9F09_06850;product=D-hexose-6-phosphate mutarotase;protein_id=TGC97275.1;transl_table=11 PYKB01000514.1 Genbank gene 5281 5457 . - . ID=gene-C9F09_06855;Name=C9F09_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06855 PYKB01000514.1 Protein Homology CDS 5281 5457 . - 0 ID=cds-TGC97276.1;Parent=gene-C9F09_06855;Dbxref=NCBI_GP:TGC97276.1;Name=TGC97276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000050556.1;locus_tag=C9F09_06855;product=hypothetical protein;protein_id=TGC97276.1;transl_table=11 PYKB01000514.1 Genbank gene 5616 6611 . - . ID=gene-C9F09_06860;Name=C9F09_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06860 PYKB01000514.1 Protein Homology CDS 5616 6611 . - 0 ID=cds-TGC97277.1;Parent=gene-C9F09_06860;Dbxref=NCBI_GP:TGC97277.1;Name=TGC97277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456222.1;locus_tag=C9F09_06860;product=aldehyde dehydrogenase;protein_id=TGC97277.1;transl_table=11 ##sequence-region PYKB01000692.1 1 321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000692.1 Genbank region 1 321 . + . ID=PYKB01000692.1:1..321;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000692.1 Genbank pseudogene 1 309 . + . ID=gene-C9F09_10535;Name=C9F09_10535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10535;pseudo=true PYKB01000692.1 Protein Homology CDS 1 309 . + 0 ID=cds-C9F09_10535;Parent=gene-C9F09_10535;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=C9F09_10535;product=sulfite reductase subunit beta;pseudo=true;transl_table=11 ##sequence-region PYKB01000139.1 1 318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000139.1 Genbank region 1 318 . + . ID=PYKB01000139.1:1..318;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000139.1 Genbank gene 1 318 . - . ID=gene-C9F09_01585;Name=mreC;end_range=318,.;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=C9F09_01585;partial=true;start_range=.,1 PYKB01000139.1 Protein Homology CDS 1 318 . - 2 ID=cds-TGD04663.1;Parent=gene-C9F09_01585;Dbxref=NCBI_GP:TGD04663.1;Name=TGD04663.1;end_range=318,.;gbkey=CDS;gene=mreC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312149.1;locus_tag=C9F09_01585;partial=true;product=rod shape-determining protein MreC;protein_id=TGD04663.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000085.1 1 317 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000085.1 Genbank region 1 317 . + . ID=PYKB01000085.1:1..317;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000085.1 Genbank gene 1 166 . - . ID=gene-C9F09_01025;Name=C9F09_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01025;partial=true;start_range=.,1 PYKB01000085.1 Protein Homology CDS 1 166 . - 0 ID=cds-TGD05776.1;Parent=gene-C9F09_01025;Dbxref=NCBI_GP:TGD05776.1;Name=TGD05776.1;Note=ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456169.1;locus_tag=C9F09_01025;partial=true;product=vitamin B12-transporter ATPase;protein_id=TGD05776.1;start_range=.,1;transl_table=11 PYKB01000085.1 Genbank gene 166 317 . - . ID=gene-C9F09_01030;Name=C9F09_01030;end_range=317,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01030;partial=true PYKB01000085.1 Protein Homology CDS 166 317 . - 2 ID=cds-TGD05777.1;Parent=gene-C9F09_01030;Dbxref=NCBI_GP:TGD05777.1;Name=TGD05777.1;end_range=317,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456170.1;locus_tag=C9F09_01030;partial=true;product=glutathione peroxidase;protein_id=TGD05777.1;transl_table=11 ##sequence-region PYKB01001425.1 1 317 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001425.1 Genbank region 1 317 . + . ID=PYKB01001425.1:1..317;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001425.1 Genbank pseudogene 1 248 . + . ID=gene-C9F09_24530;Name=C9F09_24530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_24530;pseudo=true PYKB01001425.1 Protein Homology CDS 1 248 . + 2 ID=cds-C9F09_24530;Parent=gene-C9F09_24530;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459269.1;locus_tag=C9F09_24530;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000009.1 1 317 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000009.1 Genbank region 1 317 . + . ID=PYKB01000009.1:1..317;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000009.1 Genbank gene 1 317 . + . ID=gene-C9F09_00095;Name=C9F09_00095;end_range=317,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00095;partial=true;start_range=.,1 PYKB01000009.1 Protein Homology CDS 1 317 . + 1 ID=cds-TGD07260.1;Parent=gene-C9F09_00095;Dbxref=NCBI_GP:TGD07260.1;Name=TGD07260.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;end_range=317,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456762.1;locus_tag=C9F09_00095;partial=true;product=PTS fructose transporter subunit EIIBC;protein_id=TGD07260.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000283.1 1 316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000283.1 Genbank region 1 316 . + . ID=PYKB01000283.1:1..316;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000283.1 Genbank gene 39 316 . + . ID=gene-C9F09_03250;Name=C9F09_03250;end_range=316,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03250;partial=true PYKB01000283.1 Protein Homology CDS 39 316 . + 0 ID=cds-TGD01694.1;Parent=gene-C9F09_03250;Dbxref=NCBI_GP:TGD01694.1;Name=TGD01694.1;end_range=316,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457745.1;locus_tag=C9F09_03250;partial=true;product=hypothetical protein;protein_id=TGD01694.1;transl_table=11 ##sequence-region PYKB01000125.1 1 316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000125.1 Genbank region 1 316 . + . ID=PYKB01000125.1:1..316;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000125.1 Genbank gene 1 316 . - . ID=gene-C9F09_01445;Name=C9F09_01445;end_range=316,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01445;partial=true;start_range=.,1 PYKB01000125.1 Protein Homology CDS 1 316 . - 2 ID=cds-TGD04939.1;Parent=gene-C9F09_01445;Dbxref=NCBI_GP:TGD04939.1;Name=TGD04939.1;end_range=316,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=C9F09_01445;partial=true;product=NAD-dependent protein deacylase;protein_id=TGD04939.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001330.1 1 315 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001330.1 Genbank region 1 315 . + . ID=PYKB01001330.1:1..315;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001330.1 Genbank pseudogene 80 315 . - . ID=gene-C9F09_22835;Name=C9F09_22835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22835;pseudo=true PYKB01001330.1 Protein Homology CDS 80 315 . - 2 ID=cds-C9F09_22835;Parent=gene-C9F09_22835;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=C9F09_22835;product=UMP phosphatase;pseudo=true;transl_table=11 ##sequence-region PYKB01001279.1 1 314 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001279.1 Genbank region 1 314 . + . ID=PYKB01001279.1:1..314;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001279.1 Genbank pseudogene 1 314 . - . ID=gene-C9F09_21910;Name=C9F09_21910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21910;pseudo=true PYKB01001279.1 Protein Homology CDS 1 314 . - 2 ID=cds-C9F09_21910;Parent=gene-C9F09_21910;Note=catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=C9F09_21910;product=L-arabinose isomerase;pseudo=true;transl_table=11 ##sequence-region PYKB01000393.1 1 314 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000393.1 Genbank region 1 314 . + . ID=PYKB01000393.1:1..314;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000393.1 Genbank gene 1 298 . - . ID=gene-C9F09_04405;Name=C9F09_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04405;partial=true;start_range=.,1 PYKB01000393.1 Protein Homology CDS 1 298 . - 0 ID=cds-TGC99761.1;Parent=gene-C9F09_04405;Dbxref=NCBI_GP:TGC99761.1;Name=TGC99761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523642.1;locus_tag=C9F09_04405;partial=true;product=MFS transporter;protein_id=TGC99761.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001352.1 1 6724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001352.1 Genbank region 1 6724 . + . ID=PYKB01001352.1:1..6724;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001352.1 Genbank gene 1 293 . - . ID=gene-C9F09_23245;Name=C9F09_23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23245;partial=true;start_range=.,1 PYKB01001352.1 Protein Homology CDS 1 293 . - 0 ID=cds-TGC80473.1;Parent=gene-C9F09_23245;Dbxref=NCBI_GP:TGC80473.1;Name=TGC80473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456756.1;locus_tag=C9F09_23245;partial=true;product=phosphoserine phosphatase SerB;protein_id=TGC80473.1;start_range=.,1;transl_table=11 PYKB01001352.1 Genbank gene 510 1877 . + . ID=gene-C9F09_23250;Name=C9F09_23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23250 PYKB01001352.1 Protein Homology CDS 510 1877 . + 0 ID=cds-TGC80474.1;Parent=gene-C9F09_23250;Dbxref=NCBI_GP:TGC80474.1;Name=TGC80474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456755.1;locus_tag=C9F09_23250;product=L-serine ammonia-lyase;protein_id=TGC80474.1;transl_table=11 PYKB01001352.1 Genbank gene 1882 2271 . + . ID=gene-C9F09_23255;Name=C9F09_23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23255 PYKB01001352.1 Protein Homology CDS 1882 2271 . + 0 ID=cds-TGC80475.1;Parent=gene-C9F09_23255;Dbxref=NCBI_GP:TGC80475.1;Name=TGC80475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=C9F09_23255;product=transcriptional regulator;protein_id=TGC80475.1;transl_table=11 PYKB01001352.1 Genbank gene 2260 3117 . - . ID=gene-C9F09_23260;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=C9F09_23260 PYKB01001352.1 Protein Homology CDS 2260 3117 . - 0 ID=cds-TGC80476.1;Parent=gene-C9F09_23260;Dbxref=NCBI_GP:TGC80476.1;Name=TGC80476.1;gbkey=CDS;gene=fghA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=C9F09_23260;product=S-formylglutathione hydrolase;protein_id=TGC80476.1;transl_table=11 PYKB01001352.1 Genbank gene 3045 3278 . - . ID=gene-C9F09_23265;Name=C9F09_23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23265 PYKB01001352.1 Protein Homology CDS 3045 3278 . - 0 ID=cds-TGC80477.1;Parent=gene-C9F09_23265;Dbxref=NCBI_GP:TGC80477.1;Name=TGC80477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012209975.1;locus_tag=C9F09_23265;product=hypothetical protein;protein_id=TGC80477.1;transl_table=11 PYKB01001352.1 Genbank gene 3447 4115 . + . ID=gene-C9F09_23270;Name=C9F09_23270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23270 PYKB01001352.1 Protein Homology CDS 3447 4115 . + 0 ID=cds-TGC80478.1;Parent=gene-C9F09_23270;Dbxref=NCBI_GP:TGC80478.1;Name=TGC80478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456752.1;locus_tag=C9F09_23270;product=GTP cyclohydrolase I FolE;protein_id=TGC80478.1;transl_table=11 PYKB01001352.1 Genbank gene 4130 5272 . + . ID=gene-C9F09_23275;Name=C9F09_23275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23275 PYKB01001352.1 Protein Homology CDS 4130 5272 . + 0 ID=cds-TGC80480.1;Parent=gene-C9F09_23275;Dbxref=NCBI_GP:TGC80480.1;Name=TGC80480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456751.1;locus_tag=C9F09_23275;product=DUF418 family protein;protein_id=TGC80480.1;transl_table=11 PYKB01001352.1 Genbank gene 5422 6444 . + . ID=gene-C9F09_23280;Name=C9F09_23280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23280 PYKB01001352.1 Protein Homology CDS 5422 6444 . + 0 ID=cds-TGC80479.1;Parent=gene-C9F09_23280;Dbxref=NCBI_GP:TGC80479.1;Name=TGC80479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=C9F09_23280;product=transcriptional regulator;protein_id=TGC80479.1;transl_table=11 ##sequence-region PYKB01000637.1 1 314 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000637.1 Genbank region 1 314 . + . ID=PYKB01000637.1:1..314;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000637.1 Genbank gene 1 314 . - . ID=gene-C9F09_09540;Name=C9F09_09540;end_range=314,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09540;partial=true;start_range=.,1 PYKB01000637.1 Protein Homology CDS 1 314 . - 2 ID=cds-TGC94602.1;Parent=gene-C9F09_09540;Dbxref=NCBI_GP:TGC94602.1;Name=TGC94602.1;end_range=314,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454965.1;locus_tag=C9F09_09540;partial=true;product=hypothetical protein;protein_id=TGC94602.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000113.1 1 311 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000113.1 Genbank region 1 311 . + . ID=PYKB01000113.1:1..311;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000113.1 Genbank gene 1 129 . - . ID=gene-C9F09_01260;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=C9F09_01260;partial=true;start_range=.,1 PYKB01000113.1 Protein Homology CDS 1 129 . - 0 ID=cds-TGD05185.1;Parent=gene-C9F09_01260;Dbxref=NCBI_GP:TGD05185.1;Name=TGD05185.1;gbkey=CDS;gene=tatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457777.1;locus_tag=C9F09_01260;partial=true;product=twin-arginine translocase subunit TatB;protein_id=TGD05185.1;start_range=.,1;transl_table=11 PYKB01000113.1 Genbank gene 133 311 . - . ID=gene-C9F09_01265;Name=C9F09_01265;end_range=311,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01265;partial=true PYKB01000113.1 Protein Homology CDS 133 311 . - 2 ID=cds-TGD05186.1;Parent=gene-C9F09_01265;Dbxref=NCBI_GP:TGD05186.1;Name=TGD05186.1;end_range=311,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457778.1;locus_tag=C9F09_01265;partial=true;product=twin-arginine translocase subunit TatA;protein_id=TGD05186.1;transl_table=11 ##sequence-region PYKB01000493.1 1 307 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000493.1 Genbank region 1 307 . + . ID=PYKB01000493.1:1..307;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000493.1 Genbank gene 1 307 . - . ID=gene-C9F09_06225;Name=rne;end_range=307,.;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=C9F09_06225;partial=true;start_range=.,1 PYKB01000493.1 Protein Homology CDS 1 307 . - 2 ID=cds-TGC97825.1;Parent=gene-C9F09_06225;Dbxref=NCBI_GP:TGC97825.1;Name=TGC97825.1;Note=bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein%3B forms part of the membrane-associated degradosome complex along with PNPase%2C RhlB%2C and enolase;end_range=307,.;gbkey=CDS;gene=rne;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=C9F09_06225;partial=true;product=ribonuclease E;protein_id=TGC97825.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001353.1 1 306 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001353.1 Genbank region 1 306 . + . ID=PYKB01001353.1:1..306;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001353.1 Genbank pseudogene 20 202 . + . ID=gene-C9F09_23285;Name=C9F09_23285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23285;pseudo=true PYKB01001353.1 Protein Homology CDS 20 202 . + 0 ID=cds-C9F09_23285;Parent=gene-C9F09_23285;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=C9F09_23285;product=glycerate kinase;pseudo=true;transl_table=11 ##sequence-region PYKB01001013.1 1 304 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001013.1 Genbank region 1 304 . + . ID=PYKB01001013.1:1..304;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001013.1 Genbank pseudogene 1 304 . + . ID=gene-C9F09_16955;Name=C9F09_16955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16955;pseudo=true PYKB01001013.1 Protein Homology CDS 1 304 . + 2 ID=cds-C9F09_16955;Parent=gene-C9F09_16955;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455198.1;locus_tag=C9F09_16955;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001207.1 1 303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001207.1 Genbank region 1 303 . + . ID=PYKB01001207.1:1..303;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001207.1 Genbank gene 1 303 . - . ID=gene-C9F09_20535;Name=C9F09_20535;end_range=303,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20535;partial=true;start_range=.,1 PYKB01001207.1 Protein Homology CDS 1 303 . - 1 ID=cds-TGC83370.1;Parent=gene-C9F09_20535;Dbxref=NCBI_GP:TGC83370.1;Name=TGC83370.1;end_range=303,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=C9F09_20535;partial=true;product=diol dehydratase reactivase subunit alpha;protein_id=TGC83370.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000303.1 1 302 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000303.1 Genbank region 1 302 . + . ID=PYKB01000303.1:1..302;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000303.1 Genbank gene 1 302 . - . ID=gene-C9F09_03420;Name=C9F09_03420;end_range=302,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03420;partial=true;start_range=.,1 PYKB01000303.1 Protein Homology CDS 1 302 . - 2 ID=cds-TGD01452.1;Parent=gene-C9F09_03420;Dbxref=NCBI_GP:TGD01452.1;Name=TGD01452.1;end_range=302,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455332.1;locus_tag=C9F09_03420;partial=true;product=urocanate hydratase;protein_id=TGD01452.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000213.1 1 301 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000213.1 Genbank region 1 301 . + . ID=PYKB01000213.1:1..301;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000213.1 Genbank gene 1 139 . + . ID=gene-C9F09_02300;Name=C9F09_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02300;partial=true;start_range=.,1 PYKB01000213.1 Protein Homology CDS 1 139 . + 1 ID=cds-TGD03456.1;Parent=gene-C9F09_02300;Dbxref=NCBI_GP:TGD03456.1;Name=TGD03456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456327.1;locus_tag=C9F09_02300;partial=true;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=TGD03456.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000066.1 1 300 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000066.1 Genbank region 1 300 . + . ID=PYKB01000066.1:1..300;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000066.1 Genbank gene 1 300 . - . ID=gene-C9F09_00820;Name=C9F09_00820;end_range=300,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00820;partial=true;start_range=.,1 PYKB01000066.1 Protein Homology CDS 1 300 . - 0 ID=cds-TGD06135.1;Parent=gene-C9F09_00820;Dbxref=NCBI_GP:TGD06135.1;Name=TGD06135.1;Note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters;end_range=300,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456828.1;locus_tag=C9F09_00820;partial=true;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=TGD06135.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001406.1 1 300 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001406.1 Genbank region 1 300 . + . ID=PYKB01001406.1:1..300;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001406.1 Genbank gene 1 231 . - . ID=gene-C9F09_24165;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=C9F09_24165;partial=true;start_range=.,1 PYKB01001406.1 Protein Homology CDS 1 231 . - 0 ID=cds-TGC79306.1;Parent=gene-C9F09_24165;Dbxref=NCBI_GP:TGC79306.1;Name=TGC79306.1;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains;gbkey=CDS;gene=aceF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505910.1;locus_tag=C9F09_24165;partial=true;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=TGC79306.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000834.1 1 6668 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000834.1 Genbank region 1 6668 . + . ID=PYKB01000834.1:1..6668;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000834.1 Genbank pseudogene 62 451 . + . ID=gene-C9F09_13140;Name=C9F09_13140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13140;pseudo=true PYKB01000834.1 Protein Homology CDS 62 451 . + 0 ID=cds-C9F09_13140;Parent=gene-C9F09_13140;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=C9F09_13140;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000834.1 Genbank gene 742 1008 . + . ID=gene-C9F09_13145;Name=C9F09_13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13145 PYKB01000834.1 Protein Homology CDS 742 1008 . + 0 ID=cds-TGC91552.1;Parent=gene-C9F09_13145;Dbxref=NCBI_GP:TGC91552.1;Name=TGC91552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454978.1;locus_tag=C9F09_13145;product=anti-adapter protein IraP;protein_id=TGC91552.1;transl_table=11 PYKB01000834.1 Genbank gene 1357 1677 . + . ID=gene-C9F09_13150;Name=C9F09_13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13150 PYKB01000834.1 Protein Homology CDS 1357 1677 . + 0 ID=cds-TGC91553.1;Parent=gene-C9F09_13150;Dbxref=NCBI_GP:TGC91553.1;Name=TGC91553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454979.1;locus_tag=C9F09_13150;product=phosphate starvation-inducible protein PsiF;protein_id=TGC91553.1;transl_table=11 PYKB01000834.1 Genbank gene 1769 2881 . + . ID=gene-C9F09_13155;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=yaiC;locus_tag=C9F09_13155 PYKB01000834.1 Protein Homology CDS 1769 2881 . + 0 ID=cds-TGC91554.1;Parent=gene-C9F09_13155;Dbxref=NCBI_GP:TGC91554.1;Name=TGC91554.1;Note=catalyzes the conversion of 2 GTP into c-di-GMP%3B adrA overexpression induces cellulose biosynthesis%2C cell adherence to abiotic surfaces and swimming and swarming motility%3B AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynthesis;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=C9F09_13155;product=diguanylate cyclase AdrA;protein_id=TGC91554.1;transl_table=11 PYKB01000834.1 Genbank gene 2896 3705 . - . ID=gene-C9F09_13160;Name=C9F09_13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13160 PYKB01000834.1 Protein Homology CDS 2896 3705 . - 0 ID=cds-TGC91555.1;Parent=gene-C9F09_13160;Dbxref=NCBI_GP:TGC91555.1;Name=TGC91555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454981.1;locus_tag=C9F09_13160;product=pyrroline-5-carboxylate reductase;protein_id=TGC91555.1;transl_table=11 PYKB01000834.1 Genbank gene 3845 4300 . + . ID=gene-C9F09_13165;Name=C9F09_13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13165 PYKB01000834.1 Protein Homology CDS 3845 4300 . + 0 ID=cds-TGC91556.1;Parent=gene-C9F09_13165;Dbxref=NCBI_GP:TGC91556.1;Name=TGC91556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454982.1;locus_tag=C9F09_13165;product=YaiI/YqxD family protein;protein_id=TGC91556.1;transl_table=11 PYKB01000834.1 Genbank gene 4485 5030 . + . ID=gene-C9F09_13170;Name=C9F09_13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13170 PYKB01000834.1 Protein Homology CDS 4485 5030 . + 0 ID=cds-TGC91557.1;Parent=gene-C9F09_13170;Dbxref=NCBI_GP:TGC91557.1;Name=TGC91557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454983.1;locus_tag=C9F09_13170;product=shikimate kinase;protein_id=TGC91557.1;transl_table=11 PYKB01000834.1 Genbank gene 5057 5248 . + . ID=gene-C9F09_13175;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=C9F09_13175 PYKB01000834.1 Protein Homology CDS 5057 5248 . + 0 ID=cds-TGC91558.1;Parent=gene-C9F09_13175;Dbxref=NCBI_GP:TGC91558.1;Name=TGC91558.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454984.1;locus_tag=C9F09_13175;product=protein YaiA;protein_id=TGC91558.1;transl_table=11 PYKB01000834.1 Genbank gene 5499 6176 . + . ID=gene-C9F09_13180;Name=C9F09_13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13180 PYKB01000834.1 Protein Homology CDS 5499 6176 . + 0 ID=cds-TGC91559.1;Parent=gene-C9F09_13180;Dbxref=NCBI_GP:TGC91559.1;Name=TGC91559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=C9F09_13180;product=AroM protein;protein_id=TGC91559.1;transl_table=11 PYKB01000834.1 Genbank gene 6247 6531 . + . ID=gene-C9F09_13185;Name=C9F09_13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13185 PYKB01000834.1 Protein Homology CDS 6247 6531 . + 0 ID=cds-TGC91560.1;Parent=gene-C9F09_13185;Dbxref=NCBI_GP:TGC91560.1;Name=TGC91560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454986.1;locus_tag=C9F09_13185;product=pyrimidine/purine nucleoside phosphorylase;protein_id=TGC91560.1;transl_table=11 ##sequence-region PYKB01000060.1 1 300 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000060.1 Genbank region 1 300 . + . ID=PYKB01000060.1:1..300;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000060.1 Genbank gene 1 300 . - . ID=gene-C9F09_00675;Name=C9F09_00675;end_range=300,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00675;partial=true;start_range=.,1 PYKB01000060.1 Protein Homology CDS 1 300 . - 1 ID=cds-TGD06253.1;Parent=gene-C9F09_00675;Dbxref=NCBI_GP:TGD06253.1;Name=TGD06253.1;end_range=300,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454885.1;locus_tag=C9F09_00675;partial=true;product=type VI secretion system protein TssL;protein_id=TGD06253.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000677.1 1 299 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000677.1 Genbank region 1 299 . + . ID=PYKB01000677.1:1..299;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000677.1 Genbank gene 1 117 . - . ID=gene-C9F09_10115;Name=C9F09_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10115;partial=true;start_range=.,1 PYKB01000677.1 Protein Homology CDS 1 117 . - 0 ID=cds-TGC94004.1;Parent=gene-C9F09_10115;Dbxref=NCBI_GP:TGC94004.1;Name=TGC94004.1;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454759.1;locus_tag=C9F09_10115;partial=true;product=nicotinate-nucleotide diphosphorylase;protein_id=TGC94004.1;start_range=.,1;transl_table=11 PYKB01000677.1 Genbank gene 205 299 . + . ID=gene-C9F09_10120;Name=C9F09_10120;end_range=299,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10120;partial=true PYKB01000677.1 Protein Homology CDS 205 299 . + 0 ID=cds-TGC94005.1;Parent=gene-C9F09_10120;Dbxref=NCBI_GP:TGC94005.1;Name=TGC94005.1;end_range=299,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454760.1;locus_tag=C9F09_10120;partial=true;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=TGC94005.1;transl_table=11 ##sequence-region PYKB01000206.1 1 299 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000206.1 Genbank region 1 299 . + . ID=PYKB01000206.1:1..299;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000206.1 Genbank pseudogene 10 246 . - . ID=gene-C9F09_02255;Name=C9F09_02255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02255;pseudo=true PYKB01000206.1 Protein Homology CDS 10 246 . - 0 ID=cds-C9F09_02255;Parent=gene-C9F09_02255;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456353.1;locus_tag=C9F09_02255;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000472.1 1 298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000472.1 Genbank region 1 298 . + . ID=PYKB01000472.1:1..298;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000472.1 Genbank gene 1 298 . - . ID=gene-C9F09_05910;Name=C9F09_05910;end_range=298,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05910;partial=true;start_range=.,1 PYKB01000472.1 Protein Homology CDS 1 298 . - 2 ID=cds-TGC98262.1;Parent=gene-C9F09_05910;Dbxref=NCBI_GP:TGC98262.1;Name=TGC98262.1;end_range=298,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458263.1;locus_tag=C9F09_05910;partial=true;product=alpha-amylase;protein_id=TGC98262.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001630.1 1 298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001630.1 Genbank region 1 298 . + . ID=PYKB01001630.1:1..298;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001630.1 Genbank pseudogene 51 298 . + . ID=gene-C9F09_28485;Name=folP;gbkey=Gene;gene=folP;gene_biotype=pseudogene;locus_tag=C9F09_28485;pseudo=true PYKB01001630.1 Protein Homology CDS 51 298 . + 0 ID=cds-C9F09_28485;Parent=gene-C9F09_28485;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457674.1;locus_tag=C9F09_28485;product=dihydropteroate synthase;pseudo=true;transl_table=11 ##sequence-region PYKB01001515.1 1 298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001515.1 Genbank region 1 298 . + . ID=PYKB01001515.1:1..298;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001515.1 Genbank gene 1 298 . + . ID=gene-C9F09_26275;Name=C9F09_26275;end_range=298,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26275;partial=true;start_range=.,1 PYKB01001515.1 Protein Homology CDS 1 298 . + 1 ID=cds-TGC76858.1;Parent=gene-C9F09_26275;Dbxref=NCBI_GP:TGC76858.1;Name=TGC76858.1;end_range=298,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=C9F09_26275;partial=true;product=malonyl CoA-acyl carrier protein transacylase;protein_id=TGC76858.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000262.1 1 295 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000262.1 Genbank region 1 295 . + . ID=PYKB01000262.1:1..295;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000262.1 Genbank gene 1 295 . + . ID=gene-C9F09_02980;Name=mrcA;end_range=295,.;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=C9F09_02980;partial=true;start_range=.,1 PYKB01000262.1 Protein Homology CDS 1 295 . + 1 ID=cds-TGD02188.1;Parent=gene-C9F09_02980;Dbxref=NCBI_GP:TGD02188.1;Name=TGD02188.1;Note=bifunctional murein transglycosylase/murein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits;end_range=295,.;gbkey=CDS;gene=mrcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458411.3;locus_tag=C9F09_02980;partial=true;product=carboxypeptidase/penicillin-binding protein 1A;protein_id=TGD02188.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000467.1 1 294 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000467.1 Genbank region 1 294 . + . ID=PYKB01000467.1:1..294;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000467.1 Genbank pseudogene 2 294 . + . ID=gene-C9F09_05850;Name=C9F09_05850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05850;pseudo=true PYKB01000467.1 Protein Homology CDS 2 294 . + 0 ID=cds-C9F09_05850;Parent=gene-C9F09_05850;Note=with UgpEC is involved in the uptake of glycerol-3-phosphate%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210849.1;locus_tag=C9F09_05850;product=glycerol-3-phosphate transporter permease;pseudo=true;transl_table=11 ##sequence-region PYKB01000645.1 1 294 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000645.1 Genbank region 1 294 . + . ID=PYKB01000645.1:1..294;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000645.1 Genbank gene 1 205 . + . ID=gene-C9F09_09680;Name=C9F09_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09680;partial=true;start_range=.,1 PYKB01000645.1 Protein Homology CDS 1 205 . + 1 ID=cds-TGC94447.1;Parent=gene-C9F09_09680;Dbxref=NCBI_GP:TGC94447.1;Name=TGC94447.1;Note=reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=C9F09_09680;partial=true;product=carbamate kinase;protein_id=TGC94447.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000263.1 1 293 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000263.1 Genbank region 1 293 . + . ID=PYKB01000263.1:1..293;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000263.1 Genbank pseudogene 87 260 . - . ID=gene-C9F09_02985;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=pseudogene;locus_tag=C9F09_02985;pseudo=true PYKB01000263.1 Protein Homology CDS 87 260 . - 0 ID=cds-C9F09_02985;Parent=gene-C9F09_02985;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=nudE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=C9F09_02985;product=ADP compounds hydrolase NudE;pseudo=true;transl_table=11 ##sequence-region PYKB01000522.1 1 6638 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000522.1 Genbank region 1 6638 . + . ID=PYKB01000522.1:1..6638;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000522.1 Genbank gene 1 750 . + . ID=gene-C9F09_07000;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=C9F09_07000;partial=true;start_range=.,1 PYKB01000522.1 Protein Homology CDS 1 750 . + 0 ID=cds-TGC97120.1;Parent=gene-C9F09_07000;Dbxref=NCBI_GP:TGC97120.1;Name=TGC97120.1;Note=catalyzes the degradation of periplasmic UDP-glucose to uridine%2C glucose-1-phosphate and inorganic phosphate%3B specific for uridine nucleotides;gbkey=CDS;gene=ushA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=C9F09_07000;partial=true;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=TGC97120.1;start_range=.,1;transl_table=11 PYKB01000522.1 Genbank gene 867 1346 . - . ID=gene-C9F09_07005;Name=C9F09_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07005 PYKB01000522.1 Protein Homology CDS 867 1346 . - 0 ID=cds-TGC97121.1;Parent=gene-C9F09_07005;Dbxref=NCBI_GP:TGC97121.1;Name=TGC97121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=C9F09_07005;product=Cys-tRNA(Pro) deacylase;protein_id=TGC97121.1;transl_table=11 PYKB01000522.1 Genbank gene 1548 2342 . - . ID=gene-C9F09_07010;Name=C9F09_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07010 PYKB01000522.1 Protein Homology CDS 1548 2342 . - 0 ID=cds-TGC97122.1;Parent=gene-C9F09_07010;Dbxref=NCBI_GP:TGC97122.1;Name=TGC97122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=C9F09_07010;product=polysaccharide biosynthesis protein GumN;protein_id=TGC97122.1;transl_table=11 PYKB01000522.1 Genbank gene 2428 3255 . - . ID=gene-C9F09_07015;Name=C9F09_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07015 PYKB01000522.1 Protein Homology CDS 2428 3255 . - 0 ID=cds-TGC97123.1;Parent=gene-C9F09_07015;Dbxref=NCBI_GP:TGC97123.1;Name=TGC97123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455092.1;locus_tag=C9F09_07015;product=DUF1311 domain-containing protein;protein_id=TGC97123.1;transl_table=11 PYKB01000522.1 Genbank gene 3409 5910 . - . ID=gene-C9F09_07020;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=C9F09_07020 PYKB01000522.1 Protein Homology CDS 3409 5910 . - 0 ID=cds-TGC97124.1;Parent=gene-C9F09_07020;Dbxref=NCBI_GP:TGC97124.1;Name=TGC97124.1;gbkey=CDS;gene=copA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455093.1;locus_tag=C9F09_07020;product=Cu+ exporting ATPase;protein_id=TGC97124.1;transl_table=11 PYKB01000522.1 Genbank gene 6020 6436 . + . ID=gene-C9F09_07025;Name=C9F09_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07025 PYKB01000522.1 Protein Homology CDS 6020 6436 . + 0 ID=cds-TGC97125.1;Parent=gene-C9F09_07025;Dbxref=NCBI_GP:TGC97125.1;Name=TGC97125.1;Note=activator of copper-responsive regulon genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=C9F09_07025;product=transcriptional regulator;protein_id=TGC97125.1;transl_table=11 PYKB01000522.1 Genbank pseudogene 6437 6547 . - . ID=gene-C9F09_07030;Name=C9F09_07030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07030;pseudo=true PYKB01000522.1 Protein Homology CDS 6437 6547 . - 0 ID=cds-C9F09_07030;Parent=gene-C9F09_07030;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455095.1;locus_tag=C9F09_07030;product=NfeD family protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001375.1 1 14331 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001375.1 Genbank region 1 14331 . + . ID=PYKB01001375.1:1..14331;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001375.1 Genbank gene 202 411 . + . ID=gene-C9F09_23640;Name=C9F09_23640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23640 PYKB01001375.1 Protein Homology CDS 202 411 . + 0 ID=cds-TGC80003.1;Parent=gene-C9F09_23640;Dbxref=NCBI_GP:TGC80003.1;Name=TGC80003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673480.1;locus_tag=C9F09_23640;product=hypothetical protein;protein_id=TGC80003.1;transl_table=11 PYKB01001375.1 Genbank gene 599 2113 . + . ID=gene-C9F09_23645;Name=C9F09_23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23645 PYKB01001375.1 Protein Homology CDS 599 2113 . + 0 ID=cds-TGC80004.1;Parent=gene-C9F09_23645;Dbxref=NCBI_GP:TGC80004.1;Name=TGC80004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000923662.1;locus_tag=C9F09_23645;product=hypothetical protein;protein_id=TGC80004.1;transl_table=11 PYKB01001375.1 Genbank gene 2347 2967 . + . ID=gene-C9F09_23650;Name=C9F09_23650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23650 PYKB01001375.1 Protein Homology CDS 2347 2967 . + 0 ID=cds-TGC80005.1;Parent=gene-C9F09_23650;Dbxref=NCBI_GP:TGC80005.1;Name=TGC80005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861012.1;locus_tag=C9F09_23650;product=inovirus Gp2 family protein;protein_id=TGC80005.1;transl_table=11 PYKB01001375.1 Genbank gene 3197 4591 . - . ID=gene-C9F09_23655;Name=C9F09_23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23655 PYKB01001375.1 Protein Homology CDS 3197 4591 . - 0 ID=cds-TGC80006.1;Parent=gene-C9F09_23655;Dbxref=NCBI_GP:TGC80006.1;Name=TGC80006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_395411.1;locus_tag=C9F09_23655;product=ATP-binding protein;protein_id=TGC80006.1;transl_table=11 PYKB01001375.1 Genbank gene 5036 5725 . + . ID=gene-C9F09_23660;Name=C9F09_23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23660 PYKB01001375.1 Protein Homology CDS 5036 5725 . + 0 ID=cds-TGC80014.1;Parent=gene-C9F09_23660;Dbxref=NCBI_GP:TGC80014.1;Name=TGC80014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686258.1;locus_tag=C9F09_23660;product=haloacid dehalogenase type II;protein_id=TGC80014.1;transl_table=11 PYKB01001375.1 Genbank gene 5893 6150 . - . ID=gene-C9F09_23665;Name=C9F09_23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23665 PYKB01001375.1 Protein Homology CDS 5893 6150 . - 0 ID=cds-TGC80015.1;Parent=gene-C9F09_23665;Dbxref=NCBI_GP:TGC80015.1;Name=TGC80015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013316534.1;locus_tag=C9F09_23665;product=recombinase;protein_id=TGC80015.1;transl_table=11 PYKB01001375.1 Genbank gene 6440 8272 . + . ID=gene-C9F09_23670;Name=C9F09_23670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23670 PYKB01001375.1 GeneMarkS+ CDS 6440 8272 . + 0 ID=cds-TGC80007.1;Parent=gene-C9F09_23670;Dbxref=NCBI_GP:TGC80007.1;Name=TGC80007.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_23670;product=hypothetical protein;protein_id=TGC80007.1;transl_table=11 PYKB01001375.1 Genbank gene 8553 9341 . - . ID=gene-C9F09_23675;Name=C9F09_23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23675 PYKB01001375.1 Protein Homology CDS 8553 9341 . - 0 ID=cds-TGC80008.1;Parent=gene-C9F09_23675;Dbxref=NCBI_GP:TGC80008.1;Name=TGC80008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004619346.1;locus_tag=C9F09_23675;product=SAM-dependent methyltransferase;protein_id=TGC80008.1;transl_table=11 PYKB01001375.1 Genbank gene 9414 9974 . - . ID=gene-C9F09_23680;Name=C9F09_23680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23680 PYKB01001375.1 Protein Homology CDS 9414 9974 . - 0 ID=cds-TGC80009.1;Parent=gene-C9F09_23680;Dbxref=NCBI_GP:TGC80009.1;Name=TGC80009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020885073.1;locus_tag=C9F09_23680;product=GNAT family N-acetyltransferase;protein_id=TGC80009.1;transl_table=11 PYKB01001375.1 Genbank gene 10054 10851 . - . ID=gene-C9F09_23685;Name=C9F09_23685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23685 PYKB01001375.1 Protein Homology CDS 10054 10851 . - 0 ID=cds-TGC80010.1;Parent=gene-C9F09_23685;Dbxref=NCBI_GP:TGC80010.1;Name=TGC80010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003835726.1;locus_tag=C9F09_23685;product=MBL fold metallo-hydrolase;protein_id=TGC80010.1;transl_table=11 PYKB01001375.1 Genbank gene 11114 12034 . + . ID=gene-C9F09_23690;Name=C9F09_23690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23690 PYKB01001375.1 Protein Homology CDS 11114 12034 . + 0 ID=cds-TGC80016.1;Parent=gene-C9F09_23690;Dbxref=NCBI_GP:TGC80016.1;Name=TGC80016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016149848.1;locus_tag=C9F09_23690;product=EamA/RhaT family transporter;protein_id=TGC80016.1;transl_table=11 PYKB01001375.1 Genbank gene 12177 12470 . + . ID=gene-C9F09_23695;Name=C9F09_23695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23695 PYKB01001375.1 Protein Homology CDS 12177 12470 . + 0 ID=cds-TGC80011.1;Parent=gene-C9F09_23695;Dbxref=NCBI_GP:TGC80011.1;Name=TGC80011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806398.1;locus_tag=C9F09_23695;product=hypothetical protein;protein_id=TGC80011.1;transl_table=11 PYKB01001375.1 Genbank gene 12566 13201 . - . ID=gene-C9F09_23700;Name=C9F09_23700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23700 PYKB01001375.1 Protein Homology CDS 12566 13201 . - 0 ID=cds-TGC80012.1;Parent=gene-C9F09_23700;Dbxref=NCBI_GP:TGC80012.1;Name=TGC80012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015584170.1;locus_tag=C9F09_23700;product=CatA-like O-acetyltransferase;protein_id=TGC80012.1;transl_table=11 PYKB01001375.1 Genbank gene 13767 14072 . + . ID=gene-C9F09_23705;Name=C9F09_23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23705 PYKB01001375.1 Protein Homology CDS 13767 14072 . + 0 ID=cds-TGC80013.1;Parent=gene-C9F09_23705;Dbxref=NCBI_GP:TGC80013.1;Name=TGC80013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227087.1;locus_tag=C9F09_23705;product=hypothetical protein;protein_id=TGC80013.1;transl_table=11 ##sequence-region PYKB01000590.1 1 293 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000590.1 Genbank region 1 293 . + . ID=PYKB01000590.1:1..293;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000590.1 Genbank pseudogene 37 240 . - . ID=gene-C9F09_08615;Name=C9F09_08615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08615;pseudo=true PYKB01000590.1 Protein Homology CDS 37 240 . - 0 ID=cds-C9F09_08615;Parent=gene-C9F09_08615;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=C9F09_08615;product=MOSC domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001320.1 1 293 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001320.1 Genbank region 1 293 . + . ID=PYKB01001320.1:1..293;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001320.1 Genbank gene 1 293 . + . ID=gene-C9F09_22685;Name=C9F09_22685;end_range=293,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22685;partial=true;start_range=.,1 PYKB01001320.1 Protein Homology CDS 1 293 . + 1 ID=cds-TGC81147.1;Parent=gene-C9F09_22685;Dbxref=NCBI_GP:TGC81147.1;Name=TGC81147.1;end_range=293,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=C9F09_22685;partial=true;product=arginine--tRNA ligase;protein_id=TGC81147.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000145.1 1 293 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000145.1 Genbank region 1 293 . + . ID=PYKB01000145.1:1..293;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000145.1 Genbank gene 1 158 . + . ID=gene-C9F09_01650;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=C9F09_01650;partial=true;start_range=.,1 PYKB01000145.1 Protein Homology CDS 1 158 . + 2 ID=cds-TGD04599.1;Parent=gene-C9F09_01650;Dbxref=NCBI_GP:TGD04599.1;Name=TGD04599.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=C9F09_01650;partial=true;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=TGD04599.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000557.1 1 292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000557.1 Genbank region 1 292 . + . ID=PYKB01000557.1:1..292;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000557.1 Genbank gene 1 292 . - . ID=gene-C9F09_07710;Name=C9F09_07710;end_range=292,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07710;partial=true;start_range=.,1 PYKB01000557.1 Protein Homology CDS 1 292 . - 2 ID=cds-TGC96331.1;Parent=gene-C9F09_07710;Dbxref=NCBI_GP:TGC96331.1;Name=TGC96331.1;end_range=292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=C9F09_07710;partial=true;product=NAD-dependent protein deacylase;protein_id=TGC96331.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000067.1 1 292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000067.1 Genbank region 1 292 . + . ID=PYKB01000067.1:1..292;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000067.1 Genbank gene 128 292 . - . ID=gene-C9F09_00825;Name=C9F09_00825;end_range=292,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00825;partial=true PYKB01000067.1 Protein Homology CDS 128 292 . - 0 ID=cds-TGD06120.1;Parent=gene-C9F09_00825;Dbxref=NCBI_GP:TGD06120.1;Name=TGD06120.1;end_range=292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456074.1;locus_tag=C9F09_00825;partial=true;product=hypothetical protein;protein_id=TGD06120.1;transl_table=11 ##sequence-region PYKB01000254.1 1 292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000254.1 Genbank region 1 292 . + . ID=PYKB01000254.1:1..292;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000254.1 Genbank pseudogene 68 292 . - . ID=gene-C9F09_02770;Name=C9F09_02770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02770;pseudo=true PYKB01000254.1 Protein Homology CDS 68 292 . - 0 ID=cds-C9F09_02770;Parent=gene-C9F09_02770;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457051.1;locus_tag=C9F09_02770;product=ribosome biogenesis GTPase Der;pseudo=true;transl_table=11 ##sequence-region PYKB01000329.1 1 291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000329.1 Genbank region 1 291 . + . ID=PYKB01000329.1:1..291;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000329.1 Genbank gene 1 291 . + . ID=gene-C9F09_03655;Name=C9F09_03655;end_range=291,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03655;partial=true;start_range=.,1 PYKB01000329.1 Protein Homology CDS 1 291 . + 1 ID=cds-TGD00953.1;Parent=gene-C9F09_03655;Dbxref=NCBI_GP:TGD00953.1;Name=TGD00953.1;end_range=291,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455644.1;locus_tag=C9F09_03655;partial=true;product=hypothetical protein;protein_id=TGD00953.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001117.1 1 291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001117.1 Genbank region 1 291 . + . ID=PYKB01001117.1:1..291;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001117.1 Genbank pseudogene 1 204 . + . ID=gene-C9F09_18775;Name=C9F09_18775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18775;pseudo=true PYKB01001117.1 Protein Homology CDS 1 204 . + 0 ID=cds-C9F09_18775;Parent=gene-C9F09_18775;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457015.1;locus_tag=C9F09_18775;product=RND transporter;pseudo=true;transl_table=11 ##sequence-region PYKB01001742.1 1 291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001742.1 Genbank region 1 291 . + . ID=PYKB01001742.1:1..291;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001742.1 Genbank pseudogene 1 291 . - . ID=gene-C9F09_30530;Name=C9F09_30530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_30530;pseudo=true PYKB01001742.1 Protein Homology CDS 1 291 . - 2 ID=cds-C9F09_30530;Parent=gene-C9F09_30530;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455125.1;locus_tag=C9F09_30530;product=5-(carboxyamino)imidazole ribonucleotide synthase;pseudo=true;transl_table=11 ##sequence-region PYKB01000207.1 1 291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000207.1 Genbank region 1 291 . + . ID=PYKB01000207.1:1..291;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000207.1 Genbank gene 81 291 . + . ID=gene-C9F09_02260;Name=C9F09_02260;end_range=291,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02260;partial=true PYKB01000207.1 Protein Homology CDS 81 291 . + 0 ID=cds-TGD03616.1;Parent=gene-C9F09_02260;Dbxref=NCBI_GP:TGD03616.1;Name=TGD03616.1;end_range=291,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001599322.1;locus_tag=C9F09_02260;partial=true;product=hypothetical protein;protein_id=TGD03616.1;transl_table=11 ##sequence-region PYKB01000921.1 1 6627 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000921.1 Genbank region 1 6627 . + . ID=PYKB01000921.1:1..6627;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000921.1 Genbank pseudogene 10 651 . + . ID=gene-C9F09_15145;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=pseudogene;locus_tag=C9F09_15145;pseudo=true PYKB01000921.1 Protein Homology CDS 10 651 . + 0 ID=cds-C9F09_15145;Parent=gene-C9F09_15145;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=rsmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=C9F09_15145;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;pseudo=true;transl_table=11 PYKB01000921.1 Genbank gene 766 1005 . + . ID=gene-C9F09_15150;Name=C9F09_15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15150 PYKB01000921.1 Protein Homology CDS 766 1005 . + 0 ID=cds-TGC89823.1;Parent=gene-C9F09_15150;Dbxref=NCBI_GP:TGC89823.1;Name=TGC89823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456356.1;locus_tag=C9F09_15150;product=DUF1480 domain-containing protein;protein_id=TGC89823.1;transl_table=11 PYKB01000921.1 Genbank gene 1116 1307 . + . ID=gene-C9F09_15155;Name=C9F09_15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15155 PYKB01000921.1 Protein Homology CDS 1116 1307 . + 0 ID=cds-TGC89824.1;Parent=gene-C9F09_15155;Dbxref=NCBI_GP:TGC89824.1;Name=TGC89824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456357.1;locus_tag=C9F09_15155;product=DUF1482 domain-containing protein;protein_id=TGC89824.1;transl_table=11 PYKB01000921.1 Genbank gene 1326 1976 . - . ID=gene-C9F09_15160;Name=C9F09_15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15160 PYKB01000921.1 Protein Homology CDS 1326 1976 . - 0 ID=cds-TGC89825.1;Parent=gene-C9F09_15160;Dbxref=NCBI_GP:TGC89825.1;Name=TGC89825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=C9F09_15160;product=serine/threonine-protein phosphatase 1;protein_id=TGC89825.1;transl_table=11 PYKB01000921.1 Genbank gene 2200 2364 . - . ID=gene-C9F09_15165;Name=C9F09_15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15165 PYKB01000921.1 Protein Homology CDS 2200 2364 . - 0 ID=cds-TGC89826.1;Parent=gene-C9F09_15165;Dbxref=NCBI_GP:TGC89826.1;Name=TGC89826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=C9F09_15165;product=hypothetical protein;protein_id=TGC89826.1;transl_table=11 PYKB01000921.1 Genbank gene 2649 3371 . - . ID=gene-C9F09_15170;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=C9F09_15170 PYKB01000921.1 Protein Homology CDS 2649 3371 . - 0 ID=cds-TGC89827.1;Parent=gene-C9F09_15170;Dbxref=NCBI_GP:TGC89827.1;Name=TGC89827.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=C9F09_15170;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=TGC89827.1;transl_table=11 PYKB01000921.1 Genbank gene 4056 4451 . + . ID=gene-C9F09_15175;Name=C9F09_15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15175 PYKB01000921.1 Protein Homology CDS 4056 4451 . + 0 ID=cds-TGC89828.1;Parent=gene-C9F09_15175;Dbxref=NCBI_GP:TGC89828.1;Name=TGC89828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456360.1;locus_tag=C9F09_15175;product=DUF1398 domain-containing protein;protein_id=TGC89828.1;transl_table=11 PYKB01000921.1 Genbank gene 4780 5256 . + . ID=gene-C9F09_15180;Name=C9F09_15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15180 PYKB01000921.1 Protein Homology CDS 4780 5256 . + 0 ID=cds-TGC89829.1;Parent=gene-C9F09_15180;Dbxref=NCBI_GP:TGC89829.1;Name=TGC89829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456361.1;locus_tag=C9F09_15180;product=hypothetical protein;protein_id=TGC89829.1;transl_table=11 PYKB01000921.1 Genbank gene 5644 6063 . - . ID=gene-C9F09_15185;Name=C9F09_15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15185 PYKB01000921.1 Protein Homology CDS 5644 6063 . - 0 ID=cds-TGC89830.1;Parent=gene-C9F09_15185;Dbxref=NCBI_GP:TGC89830.1;Name=TGC89830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=C9F09_15185;product=N-acetyltransferase;protein_id=TGC89830.1;transl_table=11 PYKB01000921.1 Genbank gene 6192 6386 . - . ID=gene-C9F09_15190;Name=C9F09_15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15190 PYKB01000921.1 Protein Homology CDS 6192 6386 . - 0 ID=cds-TGC89831.1;Parent=gene-C9F09_15190;Dbxref=NCBI_GP:TGC89831.1;Name=TGC89831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495377.1;locus_tag=C9F09_15190;product=hypothetical protein;protein_id=TGC89831.1;transl_table=11 ##sequence-region PYKB01000681.1 1 290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000681.1 Genbank region 1 290 . + . ID=PYKB01000681.1:1..290;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000681.1 Genbank gene 1 115 . - . ID=gene-C9F09_10240;Name=C9F09_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10240;partial=true;start_range=.,1 PYKB01000681.1 Protein Homology CDS 1 115 . - 0 ID=cds-TGC93951.1;Parent=gene-C9F09_10240;Dbxref=NCBI_GP:TGC93951.1;Name=TGC93951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455095.1;locus_tag=C9F09_10240;partial=true;product=NfeD family protein;protein_id=TGC93951.1;start_range=.,1;transl_table=11 PYKB01000681.1 Genbank gene 112 290 . - . ID=gene-C9F09_10245;Name=C9F09_10245;end_range=290,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10245;partial=true PYKB01000681.1 Protein Homology CDS 112 290 . - 2 ID=cds-TGC93952.1;Parent=gene-C9F09_10245;Dbxref=NCBI_GP:TGC93952.1;Name=TGC93952.1;end_range=290,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=C9F09_10245;partial=true;product=paraslipin;protein_id=TGC93952.1;transl_table=11 ##sequence-region PYKB01001706.1 1 290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001706.1 Genbank region 1 290 . + . ID=PYKB01001706.1:1..290;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001706.1 Genbank gene 1 290 . + . ID=gene-C9F09_29825;Name=C9F09_29825;end_range=290,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29825;partial=true;start_range=.,1 PYKB01001706.1 Protein Homology CDS 1 290 . + 1 ID=cds-TGC71821.1;Parent=gene-C9F09_29825;Dbxref=NCBI_GP:TGC71821.1;Name=TGC71821.1;Note=sodium:branched-chain amino acid symporter;end_range=290,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454993.1;locus_tag=C9F09_29825;partial=true;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=TGC71821.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000026.1 1 290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000026.1 Genbank region 1 290 . + . ID=PYKB01000026.1:1..290;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000026.1 Genbank pseudogene 1 290 . - . ID=gene-C9F09_00305;Name=C9F09_00305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00305;pseudo=true PYKB01000026.1 Protein Homology CDS 1 290 . - 1 ID=cds-C9F09_00305;Parent=gene-C9F09_00305;Note=rotamase%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458447.1;locus_tag=C9F09_00305;product=FKBP-type peptidyl-prolyl cis-trans isomerase FkpA;pseudo=true;transl_table=11 ##sequence-region PYKB01000277.1 1 288 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000277.1 Genbank region 1 288 . + . ID=PYKB01000277.1:1..288;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000277.1 Genbank gene 51 288 . - . ID=gene-C9F09_03145;Name=C9F09_03145;end_range=288,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03145;partial=true PYKB01000277.1 Protein Homology CDS 51 288 . - 1 ID=cds-TGD01868.1;Parent=gene-C9F09_03145;Dbxref=NCBI_GP:TGD01868.1;Name=TGD01868.1;end_range=288,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457032.1;locus_tag=C9F09_03145;partial=true;product=uracil permease;protein_id=TGD01868.1;transl_table=11 ##sequence-region PYKB01000928.1 1 288 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000928.1 Genbank region 1 288 . + . ID=PYKB01000928.1:1..288;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000928.1 Genbank gene 1 288 . + . ID=gene-C9F09_15325;Name=garR;end_range=288,.;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=C9F09_15325;partial=true;start_range=.,1 PYKB01000928.1 Protein Homology CDS 1 288 . + 2 ID=cds-TGC89745.1;Parent=gene-C9F09_15325;Dbxref=NCBI_GP:TGC89745.1;Name=TGC89745.1;Note=catalyzes the reduction of tartronate semialdehyde to glycerate;end_range=288,.;gbkey=CDS;gene=garR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=C9F09_15325;partial=true;product=2-hydroxy-3-oxopropionate reductase;protein_id=TGC89745.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000008.1 1 288 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000008.1 Genbank region 1 288 . + . ID=PYKB01000008.1:1..288;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000008.1 Genbank gene 1 288 . - . ID=gene-C9F09_00090;Name=C9F09_00090;end_range=288,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00090;partial=true;start_range=.,1 PYKB01000008.1 Protein Homology CDS 1 288 . - 2 ID=cds-TGD07278.1;Parent=gene-C9F09_00090;Dbxref=NCBI_GP:TGD07278.1;Name=TGD07278.1;end_range=288,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457370.1;locus_tag=C9F09_00090;partial=true;product=MFS transporter;protein_id=TGD07278.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000267.1 1 287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000267.1 Genbank region 1 287 . + . ID=PYKB01000267.1:1..287;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000267.1 Genbank gene 1 287 . + . ID=gene-C9F09_03005;Name=C9F09_03005;end_range=287,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03005;partial=true;start_range=.,1 PYKB01000267.1 Protein Homology CDS 1 287 . + 0 ID=cds-TGD02064.1;Parent=gene-C9F09_03005;Dbxref=NCBI_GP:TGD02064.1;Name=TGD02064.1;Note=catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine;end_range=287,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458117.1;locus_tag=C9F09_03005;partial=true;product=trimethylamine-N-oxide reductase TorA;protein_id=TGD02064.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001169.1 1 286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001169.1 Genbank region 1 286 . + . ID=PYKB01001169.1:1..286;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001169.1 Genbank pseudogene 1 212 . + . ID=gene-C9F09_19765;Name=C9F09_19765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_19765;pseudo=true PYKB01001169.1 Protein Homology CDS 1 212 . + 2 ID=cds-C9F09_19765;Parent=gene-C9F09_19765;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457507.1;locus_tag=C9F09_19765;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000324.1 1 285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000324.1 Genbank region 1 285 . + . ID=PYKB01000324.1:1..285;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000324.1 Genbank gene 1 209 . - . ID=gene-C9F09_03615;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=C9F09_03615;partial=true;start_range=.,1 PYKB01000324.1 Protein Homology CDS 1 209 . - 0 ID=cds-TGD01087.1;Parent=gene-C9F09_03615;Dbxref=NCBI_GP:TGD01087.1;Name=TGD01087.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459783.3;locus_tag=C9F09_03615;partial=true;product=molybdopterin synthase sulfur carrier subunit;protein_id=TGD01087.1;start_range=.,1;transl_table=11 PYKB01000324.1 Genbank gene 196 285 . - . ID=gene-C9F09_03620;Name=moaC;end_range=285,.;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=C9F09_03620;partial=true PYKB01000324.1 Protein Homology CDS 196 285 . - 0 ID=cds-TGD01086.1;Parent=gene-C9F09_03620;Dbxref=NCBI_GP:TGD01086.1;Name=TGD01086.1;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;end_range=285,.;gbkey=CDS;gene=moaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455345.1;locus_tag=C9F09_03620;partial=true;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=TGD01086.1;transl_table=11 ##sequence-region PYKB01000804.1 1 6606 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000804.1 Genbank region 1 6606 . + . ID=PYKB01000804.1:1..6606;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000804.1 Genbank gene 431 775 . + . ID=gene-C9F09_12540;Name=C9F09_12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12540 PYKB01000804.1 Protein Homology CDS 431 775 . + 0 ID=cds-TGC92104.1;Parent=gene-C9F09_12540;Dbxref=NCBI_GP:TGC92104.1;Name=TGC92104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=C9F09_12540;product=cytoplasmic protein;protein_id=TGC92104.1;transl_table=11 PYKB01000804.1 Genbank gene 777 1103 . - . ID=gene-C9F09_12545;Name=C9F09_12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12545 PYKB01000804.1 Protein Homology CDS 777 1103 . - 0 ID=cds-TGC92105.1;Parent=gene-C9F09_12545;Dbxref=NCBI_GP:TGC92105.1;Name=TGC92105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675457.1;locus_tag=C9F09_12545;product=hypothetical protein;protein_id=TGC92105.1;transl_table=11 PYKB01000804.1 Genbank pseudogene 1145 5368 . - . ID=gene-C9F09_12550;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=pseudogene;locus_tag=C9F09_12550;pseudo=true PYKB01000804.1 Protein Homology CDS 1145 5368 . - 0 ID=cds-C9F09_12550;Parent=gene-C9F09_12550;Note=internal stop;gbkey=CDS;gene=rpoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457916.1;locus_tag=C9F09_12550;product=DNA-directed RNA polymerase subunit beta';pseudo=true;transl_table=11 PYKB01000804.1 Genbank gene 5445 6606 . - . ID=gene-C9F09_12555;Name=rpoB;end_range=6606,.;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=C9F09_12555;partial=true PYKB01000804.1 Protein Homology CDS 5445 6606 . - 1 ID=cds-TGC92106.1;Parent=gene-C9F09_12555;Dbxref=NCBI_GP:TGC92106.1;Name=TGC92106.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;end_range=6606,.;gbkey=CDS;gene=rpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457917.1;locus_tag=C9F09_12555;partial=true;product=DNA-directed RNA polymerase subunit beta;protein_id=TGC92106.1;transl_table=11 ##sequence-region PYKB01000853.1 1 284 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000853.1 Genbank region 1 284 . + . ID=PYKB01000853.1:1..284;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000853.1 Genbank gene 1 284 . + . ID=gene-C9F09_13595;Name=C9F09_13595;end_range=284,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13595;partial=true;start_range=.,1 PYKB01000853.1 Protein Homology CDS 1 284 . + 2 ID=cds-TGC91202.1;Parent=gene-C9F09_13595;Dbxref=NCBI_GP:TGC91202.1;Name=TGC91202.1;Note=catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine;end_range=284,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458281.1;locus_tag=C9F09_13595;partial=true;product=trimethylamine-N-oxide reductase TorA;protein_id=TGC91202.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001716.1 1 284 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001716.1 Genbank region 1 284 . + . ID=PYKB01001716.1:1..284;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001716.1 Genbank gene 1 284 . - . ID=gene-C9F09_30050;Name=C9F09_30050;end_range=284,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30050;partial=true;start_range=.,1 PYKB01001716.1 Protein Homology CDS 1 284 . - 2 ID=cds-TGC71503.1;Parent=gene-C9F09_30050;Dbxref=NCBI_GP:TGC71503.1;Name=TGC71503.1;end_range=284,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=C9F09_30050;partial=true;product=hypothetical protein;protein_id=TGC71503.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000289.1 1 283 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000289.1 Genbank region 1 283 . + . ID=PYKB01000289.1:1..283;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000289.1 Genbank gene 1 283 . + . ID=gene-C9F09_03320;Name=C9F09_03320;end_range=283,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03320;partial=true;start_range=.,1 PYKB01000289.1 Protein Homology CDS 1 283 . + 2 ID=cds-TGD01593.1;Parent=gene-C9F09_03320;Dbxref=NCBI_GP:TGD01593.1;Name=TGD01593.1;Note=catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine;end_range=283,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458281.1;locus_tag=C9F09_03320;partial=true;product=trimethylamine-N-oxide reductase TorA;protein_id=TGD01593.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000184.1 1 283 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000184.1 Genbank region 1 283 . + . ID=PYKB01000184.1:1..283;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000184.1 Genbank gene 1 283 . - . ID=gene-C9F09_02050;Name=C9F09_02050;end_range=283,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02050;partial=true;start_range=.,1 PYKB01000184.1 Protein Homology CDS 1 283 . - 1 ID=cds-TGD03826.1;Parent=gene-C9F09_02050;Dbxref=NCBI_GP:TGD03826.1;Name=TGD03826.1;end_range=283,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456817.1;locus_tag=C9F09_02050;partial=true;product=DNA gyrase subunit A;protein_id=TGD03826.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000351.1 1 283 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000351.1 Genbank region 1 283 . + . ID=PYKB01000351.1:1..283;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000351.1 Genbank pseudogene 61 219 . + . ID=gene-C9F09_03960;Name=C9F09_03960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03960;pseudo=true PYKB01000351.1 Protein Homology CDS 61 219 . + 0 ID=cds-C9F09_03960;Parent=gene-C9F09_03960;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454921.1;locus_tag=C9F09_03960;product=acyl-CoA dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKB01000296.1 1 282 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000296.1 Genbank region 1 282 . + . ID=PYKB01000296.1:1..282;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000296.1 Genbank gene 1 282 . + . ID=gene-C9F09_03370;Name=C9F09_03370;end_range=282,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03370;partial=true;start_range=.,1 PYKB01000296.1 Protein Homology CDS 1 282 . + 2 ID=cds-TGD01523.1;Parent=gene-C9F09_03370;Dbxref=NCBI_GP:TGD01523.1;Name=TGD01523.1;end_range=282,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457251.1;locus_tag=C9F09_03370;partial=true;product=hypothetical protein;protein_id=TGD01523.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000109.1 1 281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000109.1 Genbank region 1 281 . + . ID=PYKB01000109.1:1..281;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000109.1 Genbank gene 1 281 . + . ID=gene-C9F09_01225;Name=C9F09_01225;end_range=281,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01225;partial=true;start_range=.,1 PYKB01000109.1 Protein Homology CDS 1 281 . + 1 ID=cds-TGD05308.1;Parent=gene-C9F09_01225;Dbxref=NCBI_GP:TGD05308.1;Name=TGD05308.1;end_range=281,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455739.1;locus_tag=C9F09_01225;partial=true;product=nitrate reductase subunit alpha;protein_id=TGD05308.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000323.1 1 280 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000323.1 Genbank region 1 280 . + . ID=PYKB01000323.1:1..280;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000323.1 Genbank pseudogene 1 243 . + . ID=gene-C9F09_03610;Name=C9F09_03610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03610;pseudo=true PYKB01000323.1 Protein Homology CDS 1 243 . + 0 ID=cds-C9F09_03610;Parent=gene-C9F09_03610;Note=YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=C9F09_03610;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;pseudo=true;transl_table=11 ##sequence-region PYKB01001401.1 1 280 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001401.1 Genbank region 1 280 . + . ID=PYKB01001401.1:1..280;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001401.1 Genbank gene 1 280 . - . ID=gene-C9F09_24095;Name=C9F09_24095;end_range=280,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24095;partial=true;start_range=.,1 PYKB01001401.1 Protein Homology CDS 1 280 . - 2 ID=cds-TGC79420.1;Parent=gene-C9F09_24095;Dbxref=NCBI_GP:TGC79420.1;Name=TGC79420.1;end_range=280,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455592.1;locus_tag=C9F09_24095;partial=true;product=two-component sensor histidine kinase;protein_id=TGC79420.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000954.1 1 280 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000954.1 Genbank region 1 280 . + . ID=PYKB01000954.1:1..280;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000954.1 Genbank gene 1 280 . + . ID=gene-C9F09_15800;Name=mnmC;end_range=280,.;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;gene_synonym=trmC,yfcK;locus_tag=C9F09_15800;partial=true;start_range=.,1 PYKB01000954.1 Protein Homology CDS 1 280 . + 2 ID=cds-TGC89163.1;Parent=gene-C9F09_15800;Dbxref=NCBI_GP:TGC89163.1;Name=TGC89163.1;Note=5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme;end_range=280,.;gbkey=CDS;gene=mnmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461321.3;locus_tag=C9F09_15800;partial=true;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=TGC89163.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001408.1 1 6533 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001408.1 Genbank region 1 6533 . + . ID=PYKB01001408.1:1..6533;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001408.1 Genbank pseudogene 49 666 . - . ID=gene-C9F09_24175;Name=C9F09_24175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_24175;pseudo=true PYKB01001408.1 Protein Homology CDS 49 666 . - 0 ID=cds-C9F09_24175;Parent=gene-C9F09_24175;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456665.1;locus_tag=C9F09_24175;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001408.1 Genbank gene 1022 1258 . - . ID=gene-C9F09_24180;Name=C9F09_24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24180 PYKB01001408.1 Protein Homology CDS 1022 1258 . - 0 ID=cds-TGC79279.1;Parent=gene-C9F09_24180;Dbxref=NCBI_GP:TGC79279.1;Name=TGC79279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751884.1;locus_tag=C9F09_24180;product=hypothetical protein;protein_id=TGC79279.1;transl_table=11 PYKB01001408.1 Genbank gene 1341 2480 . + . ID=gene-C9F09_24185;Name=C9F09_24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24185 PYKB01001408.1 Protein Homology CDS 1341 2480 . + 0 ID=cds-TGC79280.1;Parent=gene-C9F09_24185;Dbxref=NCBI_GP:TGC79280.1;Name=TGC79280.1;Note=required for the translocation of capsular polysaccharide through the outer membrane;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=C9F09_24185;product=polysaccharide export protein Wza;protein_id=TGC79280.1;transl_table=11 PYKB01001408.1 Genbank gene 2486 2935 . + . ID=gene-C9F09_24190;Name=C9F09_24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24190 PYKB01001408.1 Protein Homology CDS 2486 2935 . + 0 ID=cds-TGC79281.1;Parent=gene-C9F09_24190;Dbxref=NCBI_GP:TGC79281.1;Name=TGC79281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=C9F09_24190;product=protein-tyrosine-phosphatase;protein_id=TGC79281.1;transl_table=11 PYKB01001408.1 Genbank gene 2932 5091 . + . ID=gene-C9F09_24195;Name=C9F09_24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24195 PYKB01001408.1 Protein Homology CDS 2932 5091 . + 0 ID=cds-TGC79282.1;Parent=gene-C9F09_24195;Dbxref=NCBI_GP:TGC79282.1;Name=TGC79282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=C9F09_24195;product=tyrosine-protein kinase Wzc;protein_id=TGC79282.1;transl_table=11 PYKB01001408.1 Genbank gene 5178 6020 . + . ID=gene-C9F09_24200;Name=C9F09_24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24200 PYKB01001408.1 Protein Homology CDS 5178 6020 . + 0 ID=cds-TGC79283.1;Parent=gene-C9F09_24200;Dbxref=NCBI_GP:TGC79283.1;Name=TGC79283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=C9F09_24200;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=TGC79283.1;transl_table=11 PYKB01001408.1 Genbank gene 6023 6523 . + . ID=gene-C9F09_24205;Name=C9F09_24205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24205 PYKB01001408.1 Protein Homology CDS 6023 6523 . + 0 ID=cds-TGC79284.1;Parent=gene-C9F09_24205;Dbxref=NCBI_GP:TGC79284.1;Name=TGC79284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015963830.1;locus_tag=C9F09_24205;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=TGC79284.1;transl_table=11 ##sequence-region PYKB01001052.1 1 279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001052.1 Genbank region 1 279 . + . ID=PYKB01001052.1:1..279;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001052.1 Genbank gene 1 279 . - . ID=gene-C9F09_17665;Name=C9F09_17665;end_range=279,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17665;partial=true;start_range=.,1 PYKB01001052.1 Protein Homology CDS 1 279 . - 0 ID=cds-TGC87071.1;Parent=gene-C9F09_17665;Dbxref=NCBI_GP:TGC87071.1;Name=TGC87071.1;Note=part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter;end_range=279,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454807.1;locus_tag=C9F09_17665;partial=true;product=iron-hydroxamate transporter ATP-binding subunit;protein_id=TGC87071.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000829.1 1 279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000829.1 Genbank region 1 279 . + . ID=PYKB01000829.1:1..279;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000829.1 Genbank gene 74 279 . - . ID=gene-C9F09_13075;Name=C9F09_13075;end_range=279,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13075;partial=true PYKB01000829.1 Protein Homology CDS 74 279 . - 2 ID=cds-TGC91642.1;Parent=gene-C9F09_13075;Dbxref=NCBI_GP:TGC91642.1;Name=TGC91642.1;end_range=279,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456723.1;locus_tag=C9F09_13075;partial=true;product=ATP-binding protein;protein_id=TGC91642.1;transl_table=11 ##sequence-region PYKB01001193.1 1 279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001193.1 Genbank region 1 279 . + . ID=PYKB01001193.1:1..279;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001193.1 Genbank gene 1 279 . - . ID=gene-C9F09_20350;Name=C9F09_20350;end_range=279,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20350;partial=true;start_range=.,1 PYKB01001193.1 Protein Homology CDS 1 279 . - 2 ID=cds-TGC83673.1;Parent=gene-C9F09_20350;Dbxref=NCBI_GP:TGC83673.1;Name=TGC83673.1;end_range=279,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455618.1;locus_tag=C9F09_20350;partial=true;product=hypothetical protein;protein_id=TGC83673.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000014.1 1 278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000014.1 Genbank region 1 278 . + . ID=PYKB01000014.1:1..278;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000014.1 Genbank gene 1 278 . + . ID=gene-C9F09_00160;Name=C9F09_00160;end_range=278,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00160;partial=true;start_range=.,1 PYKB01000014.1 Protein Homology CDS 1 278 . + 2 ID=cds-TGD07054.1;Parent=gene-C9F09_00160;Dbxref=NCBI_GP:TGD07054.1;Name=TGD07054.1;end_range=278,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457387.1;locus_tag=C9F09_00160;partial=true;product=hypothetical protein;protein_id=TGD07054.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001178.1 1 278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001178.1 Genbank region 1 278 . + . ID=PYKB01001178.1:1..278;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001178.1 Genbank gene 145 278 . - . ID=gene-C9F09_19985;Name=C9F09_19985;end_range=278,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19985;partial=true PYKB01001178.1 Protein Homology CDS 145 278 . - 2 ID=cds-TGC84115.1;Parent=gene-C9F09_19985;Dbxref=NCBI_GP:TGC84115.1;Name=TGC84115.1;end_range=278,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458836.1;locus_tag=C9F09_19985;partial=true;product=EamA family transporter;protein_id=TGC84115.1;transl_table=11 ##sequence-region PYKB01000994.1 1 278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000994.1 Genbank region 1 278 . + . ID=PYKB01000994.1:1..278;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000994.1 Genbank gene 1 278 . - . ID=gene-C9F09_16620;Name=C9F09_16620;end_range=278,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16620;partial=true;start_range=.,1 PYKB01000994.1 GeneMarkS+ CDS 1 278 . - 0 ID=cds-TGC88304.1;Parent=gene-C9F09_16620;Dbxref=NCBI_GP:TGC88304.1;Name=TGC88304.1;end_range=278,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_16620;partial=true;product=ABC transporter permease;protein_id=TGC88304.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000030.1 1 276 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000030.1 Genbank region 1 276 . + . ID=PYKB01000030.1:1..276;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000030.1 Genbank pseudogene 1 250 . + . ID=gene-C9F09_00375;Name=C9F09_00375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00375;pseudo=true PYKB01000030.1 Protein Homology CDS 1 250 . + 1 ID=cds-C9F09_00375;Parent=gene-C9F09_00375;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=C9F09_00375;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKB01000561.1 1 275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000561.1 Genbank region 1 275 . + . ID=PYKB01000561.1:1..275;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000561.1 Genbank gene 21 275 . + . ID=gene-C9F09_07800;Name=C9F09_07800;end_range=275,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07800;partial=true PYKB01000561.1 Protein Homology CDS 21 275 . + 0 ID=cds-TGC96250.1;Parent=gene-C9F09_07800;Dbxref=NCBI_GP:TGC96250.1;Name=TGC96250.1;end_range=275,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455152.1;locus_tag=C9F09_07800;partial=true;product=hypothetical protein;protein_id=TGC96250.1;transl_table=11 ##sequence-region PYKB01001428.1 1 275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001428.1 Genbank region 1 275 . + . ID=PYKB01001428.1:1..275;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001428.1 Genbank gene 1 275 . - . ID=gene-C9F09_24565;Name=aceF;end_range=275,.;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=C9F09_24565;partial=true;start_range=.,1 PYKB01001428.1 Protein Homology CDS 1 275 . - 2 ID=cds-TGC78849.1;Parent=gene-C9F09_24565;Dbxref=NCBI_GP:TGC78849.1;Name=TGC78849.1;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains;end_range=275,.;gbkey=CDS;gene=aceF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454767.1;locus_tag=C9F09_24565;partial=true;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=TGC78849.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000740.1 1 6524 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000740.1 Genbank region 1 6524 . + . ID=PYKB01000740.1:1..6524;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000740.1 Genbank gene 1 398 . + . ID=gene-C9F09_11380;Name=C9F09_11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11380;partial=true;start_range=.,1 PYKB01000740.1 Protein Homology CDS 1 398 . + 2 ID=cds-TGC93095.1;Parent=gene-C9F09_11380;Dbxref=NCBI_GP:TGC93095.1;Name=TGC93095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462000.3;locus_tag=C9F09_11380;partial=true;product=GntR family transcriptional regulator;protein_id=TGC93095.1;start_range=.,1;transl_table=11 PYKB01000740.1 Genbank pseudogene 477 1099 . - . ID=gene-C9F09_11385;Name=C9F09_11385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11385;pseudo=true PYKB01000740.1 Protein Homology CDS 477 1099 . - 0 ID=cds-C9F09_11385;Parent=gene-C9F09_11385;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727271.1;locus_tag=C9F09_11385;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000740.1 Genbank gene 1631 3103 . + . ID=gene-C9F09_11390;Name=C9F09_11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11390 PYKB01000740.1 Protein Homology CDS 1631 3103 . + 0 ID=cds-TGC93096.1;Parent=gene-C9F09_11390;Dbxref=NCBI_GP:TGC93096.1;Name=TGC93096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461999.1;locus_tag=C9F09_11390;product=mannitol dehydrogenase family protein;protein_id=TGC93096.1;transl_table=11 PYKB01000740.1 Genbank gene 3106 4122 . + . ID=gene-C9F09_11395;Name=C9F09_11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11395 PYKB01000740.1 Protein Homology CDS 3106 4122 . + 0 ID=cds-TGC93097.1;Parent=gene-C9F09_11395;Dbxref=NCBI_GP:TGC93097.1;Name=TGC93097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461998.1;locus_tag=C9F09_11395;product=galactonate oxidoreductase;protein_id=TGC93097.1;transl_table=11 PYKB01000740.1 Genbank gene 4136 5143 . + . ID=gene-C9F09_11400;Name=C9F09_11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11400 PYKB01000740.1 Protein Homology CDS 4136 5143 . + 0 ID=cds-TGC93098.1;Parent=gene-C9F09_11400;Dbxref=NCBI_GP:TGC93098.1;Name=TGC93098.1;Note=catalyzes the formation of oxalurate from ureidoglycolate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461997.1;locus_tag=C9F09_11400;product=Ldh family oxidoreductase;protein_id=TGC93098.1;transl_table=11 PYKB01000740.1 Genbank gene 5182 5655 . + . ID=gene-C9F09_11405;Name=C9F09_11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11405 PYKB01000740.1 Protein Homology CDS 5182 5655 . + 0 ID=cds-TGC93099.1;Parent=gene-C9F09_11405;Dbxref=NCBI_GP:TGC93099.1;Name=TGC93099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461996.1;locus_tag=C9F09_11405;product=YhcH/YjgK/YiaL family protein;protein_id=TGC93099.1;transl_table=11 PYKB01000740.1 Genbank gene 5869 6524 . + . ID=gene-C9F09_11410;Name=C9F09_11410;end_range=6524,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11410;partial=true PYKB01000740.1 Protein Homology CDS 5869 6524 . + 0 ID=cds-TGC93100.1;Parent=gene-C9F09_11410;Dbxref=NCBI_GP:TGC93100.1;Name=TGC93100.1;end_range=6524,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461995.3;locus_tag=C9F09_11410;partial=true;product=alpha/beta hydrolase;protein_id=TGC93100.1;transl_table=11 ##sequence-region PYKB01000106.1 1 274 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000106.1 Genbank region 1 274 . + . ID=PYKB01000106.1:1..274;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000106.1 Genbank pseudogene 65 256 . - . ID=gene-C9F09_01210;Name=C9F09_01210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01210;pseudo=true PYKB01000106.1 Protein Homology CDS 65 256 . - 0 ID=cds-C9F09_01210;Parent=gene-C9F09_01210;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=C9F09_01210;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000252.1 1 274 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000252.1 Genbank region 1 274 . + . ID=PYKB01000252.1:1..274;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000252.1 Genbank pseudogene 1 213 . + . ID=gene-C9F09_02755;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=pseudogene;locus_tag=C9F09_02755;pseudo=true PYKB01000252.1 Protein Homology CDS 1 213 . + 0 ID=cds-C9F09_02755;Parent=gene-C9F09_02755;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=hemA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309742.1;locus_tag=C9F09_02755;product=glutamyl-tRNA reductase;pseudo=true;transl_table=11 ##sequence-region PYKB01000600.1 1 274 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000600.1 Genbank region 1 274 . + . ID=PYKB01000600.1:1..274;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000600.1 Genbank gene 1 144 . + . ID=gene-C9F09_08770;Name=C9F09_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08770;partial=true;start_range=.,1 PYKB01000600.1 Protein Homology CDS 1 144 . + 0 ID=cds-TGC95315.1;Parent=gene-C9F09_08770;Dbxref=NCBI_GP:TGC95315.1;Name=TGC95315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454857.1;locus_tag=C9F09_08770;partial=true;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=TGC95315.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000657.1 1 273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000657.1 Genbank region 1 273 . + . ID=PYKB01000657.1:1..273;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000657.1 Genbank gene 89 247 . + . ID=gene-C9F09_09880;Name=C9F09_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09880 PYKB01000657.1 Protein Homology CDS 89 247 . + 0 ID=cds-TGC94270.1;Parent=gene-C9F09_09880;Dbxref=NCBI_GP:TGC94270.1;Name=TGC94270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008992001.1;locus_tag=C9F09_09880;product=hypothetical protein;protein_id=TGC94270.1;transl_table=11 ##sequence-region PYKB01000841.1 1 273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000841.1 Genbank region 1 273 . + . ID=PYKB01000841.1:1..273;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000841.1 Genbank gene 1 180 . - . ID=gene-C9F09_13340;Name=C9F09_13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13340;partial=true;start_range=.,1 PYKB01000841.1 Protein Homology CDS 1 180 . - 0 ID=cds-TGC91423.1;Parent=gene-C9F09_13340;Dbxref=NCBI_GP:TGC91423.1;Name=TGC91423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001547362.1;locus_tag=C9F09_13340;partial=true;product=inner membrane protein YhjD;protein_id=TGC91423.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000068.1 1 273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000068.1 Genbank region 1 273 . + . ID=PYKB01000068.1:1..273;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000068.1 Genbank pseudogene 1 273 . - . ID=gene-C9F09_00830;Name=C9F09_00830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00830;pseudo=true PYKB01000068.1 Protein Homology CDS 1 273 . - 1 ID=cds-C9F09_00830;Parent=gene-C9F09_00830;Note=catalyzes the conversion of NADPH to NADH%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457934.1;locus_tag=C9F09_00830;product=NAD(P)(+) transhydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKB01001033.1 1 272 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001033.1 Genbank region 1 272 . + . ID=PYKB01001033.1:1..272;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001033.1 Genbank gene 1 272 . + . ID=gene-C9F09_17250;Name=C9F09_17250;end_range=272,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17250;partial=true;start_range=.,1 PYKB01001033.1 Protein Homology CDS 1 272 . + 0 ID=cds-TGC87515.1;Parent=gene-C9F09_17250;Dbxref=NCBI_GP:TGC87515.1;Name=TGC87515.1;end_range=272,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456452.1;locus_tag=C9F09_17250;partial=true;product=hypothetical protein;protein_id=TGC87515.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000917.1 1 272 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000917.1 Genbank region 1 272 . + . ID=PYKB01000917.1:1..272;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000917.1 Genbank pseudogene 1 205 . - . ID=gene-C9F09_15095;Name=C9F09_15095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15095;pseudo=true PYKB01000917.1 Protein Homology CDS 1 205 . - 0 ID=cds-C9F09_15095;Parent=gene-C9F09_15095;Note=catalyzes the formation of pyruvate from oxaloacetate%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9F09_15095;product=oxaloacetate decarboxylase;pseudo=true;transl_table=11 ##sequence-region PYKB01000110.1 1 272 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000110.1 Genbank region 1 272 . + . ID=PYKB01000110.1:1..272;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea ##sequence-region PYKB01001197.1 1 6502 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001197.1 Genbank region 1 6502 . + . ID=PYKB01001197.1:1..6502;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001197.1 Genbank gene 1 947 . - . ID=gene-C9F09_20385;Name=C9F09_20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20385;partial=true;start_range=.,1 PYKB01001197.1 Protein Homology CDS 1 947 . - 0 ID=cds-TGC83578.1;Parent=gene-C9F09_20385;Dbxref=NCBI_GP:TGC83578.1;Name=TGC83578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=C9F09_20385;partial=true;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=TGC83578.1;start_range=.,1;transl_table=11 PYKB01001197.1 Genbank gene 991 2364 . - . ID=gene-C9F09_20390;Name=C9F09_20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20390 PYKB01001197.1 Protein Homology CDS 991 2364 . - 0 ID=cds-TGC83579.1;Parent=gene-C9F09_20390;Dbxref=NCBI_GP:TGC83579.1;Name=TGC83579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=C9F09_20390;product=PTS galactitol transporter subunit IIC;protein_id=TGC83579.1;transl_table=11 PYKB01001197.1 Genbank gene 2368 2652 . - . ID=gene-C9F09_20395;Name=C9F09_20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20395 PYKB01001197.1 Protein Homology CDS 2368 2652 . - 0 ID=cds-TGC83580.1;Parent=gene-C9F09_20395;Dbxref=NCBI_GP:TGC83580.1;Name=TGC83580.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457643.1;locus_tag=C9F09_20395;product=PTS galactitol transporter subunit IIB;protein_id=TGC83580.1;transl_table=11 PYKB01001197.1 Genbank gene 2683 3147 . - . ID=gene-C9F09_20400;Name=C9F09_20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20400 PYKB01001197.1 Protein Homology CDS 2683 3147 . - 0 ID=cds-TGC83581.1;Parent=gene-C9F09_20400;Dbxref=NCBI_GP:TGC83581.1;Name=TGC83581.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=C9F09_20400;product=PTS galactitol transporter subunit IIA;protein_id=TGC83581.1;transl_table=11 PYKB01001197.1 Genbank gene 3162 4433 . - . ID=gene-C9F09_20405;Name=C9F09_20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20405 PYKB01001197.1 Protein Homology CDS 3162 4433 . - 0 ID=cds-TGC83582.1;Parent=gene-C9F09_20405;Dbxref=NCBI_GP:TGC83582.1;Name=TGC83582.1;Note=with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate%3B subunit Z may act as a chaperone for the Y subunit;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=C9F09_20405;product=tagatose-bisphosphate aldolase;protein_id=TGC83582.1;transl_table=11 PYKB01001197.1 Genbank gene 4631 5437 . - . ID=gene-C9F09_20410;Name=C9F09_20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20410 PYKB01001197.1 Protein Homology CDS 4631 5437 . - 0 ID=cds-TGC83583.1;Parent=gene-C9F09_20410;Dbxref=NCBI_GP:TGC83583.1;Name=TGC83583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462169.1;locus_tag=C9F09_20410;product=HPr family phosphocarrier protein;protein_id=TGC83583.1;transl_table=11 PYKB01001197.1 Genbank gene 5424 6502 . - . ID=gene-C9F09_20415;Name=C9F09_20415;end_range=6502,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20415;partial=true PYKB01001197.1 Protein Homology CDS 5424 6502 . - 2 ID=cds-TGC83584.1;Parent=gene-C9F09_20415;Dbxref=NCBI_GP:TGC83584.1;Name=TGC83584.1;end_range=6502,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462168.1;locus_tag=C9F09_20415;partial=true;product=PTS fructose transporter subunit IIC;protein_id=TGC83584.1;transl_table=11 ##sequence-region PYKB01000244.1 1 272 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000244.1 Genbank region 1 272 . + . ID=PYKB01000244.1:1..272;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000244.1 Genbank gene 1 272 . + . ID=gene-C9F09_02680;Name=tbpA;end_range=272,.;gbkey=Gene;gene=tbpA;gene_biotype=protein_coding;locus_tag=C9F09_02680;partial=true;start_range=.,1 PYKB01000244.1 Protein Homology CDS 1 272 . + 1 ID=cds-TGD02652.1;Parent=gene-C9F09_02680;Dbxref=NCBI_GP:TGD02652.1;Name=TGD02652.1;Note=part of the thiamine and TPP transport system tbpA-thiPQ;end_range=272,.;gbkey=CDS;gene=tbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454720.1;locus_tag=C9F09_02680;partial=true;product=thiamine ABC transporter substrate-binding protein;protein_id=TGD02652.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000169.1 1 271 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000169.1 Genbank region 1 271 . + . ID=PYKB01000169.1:1..271;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000169.1 Genbank pseudogene 1 265 . + . ID=gene-C9F09_01905;Name=C9F09_01905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01905;pseudo=true PYKB01000169.1 Protein Homology CDS 1 265 . + 1 ID=cds-C9F09_01905;Parent=gene-C9F09_01905;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457592.1;locus_tag=C9F09_01905;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKB01000314.1 1 271 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000314.1 Genbank region 1 271 . + . ID=PYKB01000314.1:1..271;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000314.1 Genbank gene 1 271 . + . ID=gene-C9F09_03520;Name=C9F09_03520;end_range=271,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03520;partial=true;start_range=.,1 PYKB01000314.1 Protein Homology CDS 1 271 . + 0 ID=cds-TGD01282.1;Parent=gene-C9F09_03520;Dbxref=NCBI_GP:TGD01282.1;Name=TGD01282.1;end_range=271,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457032.1;locus_tag=C9F09_03520;partial=true;product=uracil permease;protein_id=TGD01282.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001060.1 1 271 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001060.1 Genbank region 1 271 . + . ID=PYKB01001060.1:1..271;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001060.1 Genbank pseudogene 1 271 . - . ID=gene-C9F09_17780;Name=C9F09_17780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17780;pseudo=true PYKB01001060.1 Protein Homology CDS 1 271 . - 0 ID=cds-C9F09_17780;Parent=gene-C9F09_17780;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=C9F09_17780;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000182.1 1 271 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000182.1 Genbank region 1 271 . + . ID=PYKB01000182.1:1..271;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000182.1 Genbank pseudogene 44 271 . - . ID=gene-C9F09_02035;Name=C9F09_02035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02035;pseudo=true PYKB01000182.1 Protein Homology CDS 44 271 . - 0 ID=cds-C9F09_02035;Parent=gene-C9F09_02035;Note=catalyzes the formation of cyclic di-3'%2C5'-guanylate from guanosine triphosphate%3B involved in the regulation of cellulose biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001726758.1;locus_tag=C9F09_02035;product=cellulose biosynthesis regulator YedQ;pseudo=true;transl_table=11 ##sequence-region PYKB01000022.1 1 270 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000022.1 Genbank region 1 270 . + . ID=PYKB01000022.1:1..270;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000022.1 Genbank gene 1 270 . - . ID=gene-C9F09_00245;Name=C9F09_00245;end_range=270,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00245;partial=true;start_range=.,1 PYKB01000022.1 Protein Homology CDS 1 270 . - 0 ID=cds-TGD06995.1;Parent=gene-C9F09_00245;Dbxref=NCBI_GP:TGD06995.1;Name=TGD06995.1;end_range=270,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=C9F09_00245;partial=true;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=TGD06995.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000056.1 1 270 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000056.1 Genbank region 1 270 . + . ID=PYKB01000056.1:1..270;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000056.1 Genbank gene 1 270 . + . ID=gene-C9F09_00650;Name=hslU;end_range=270,.;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=C9F09_00650;partial=true;start_range=.,1 PYKB01000056.1 Protein Homology CDS 1 270 . + 2 ID=cds-TGD06338.1;Parent=gene-C9F09_00650;Dbxref=NCBI_GP:TGD06338.1;Name=TGD06338.1;Note=heat shock protein involved in degradation of misfolded proteins;end_range=270,.;gbkey=CDS;gene=hslU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=C9F09_00650;partial=true;product=HslU--HslV peptidase ATPase subunit;protein_id=TGD06338.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000878.1 1 269 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000878.1 Genbank region 1 269 . + . ID=PYKB01000878.1:1..269;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000878.1 Genbank gene 1 257 . - . ID=gene-C9F09_14310;Name=C9F09_14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14310;partial=true;start_range=.,1 PYKB01000878.1 Protein Homology CDS 1 257 . - 0 ID=cds-TGC90651.1;Parent=gene-C9F09_14310;Dbxref=NCBI_GP:TGC90651.1;Name=TGC90651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747013.1;locus_tag=C9F09_14310;partial=true;product=hypothetical protein;protein_id=TGC90651.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000297.1 1 269 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000297.1 Genbank region 1 269 . + . ID=PYKB01000297.1:1..269;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000297.1 Genbank pseudogene 71 269 . + . ID=gene-C9F09_03375;Name=C9F09_03375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03375;pseudo=true PYKB01000297.1 Protein Homology CDS 71 269 . + 0 ID=cds-C9F09_03375;Parent=gene-C9F09_03375;Note=with HisPMQ is involved in the transport of histidine%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456896.1;locus_tag=C9F09_03375;product=histidine ABC transporter substrate-binding protein HisJ;pseudo=true;transl_table=11 ##sequence-region PYKB01001154.1 1 6481 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001154.1 Genbank region 1 6481 . + . ID=PYKB01001154.1:1..6481;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001154.1 Genbank gene 1 875 . - . ID=gene-C9F09_19500;Name=C9F09_19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19500;partial=true;start_range=.,1 PYKB01001154.1 Protein Homology CDS 1 875 . - 0 ID=cds-TGC84599.1;Parent=gene-C9F09_19500;Dbxref=NCBI_GP:TGC84599.1;Name=TGC84599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=C9F09_19500;partial=true;product=Pyoverdin chromophore biosynthetic protein pvcC;protein_id=TGC84599.1;start_range=.,1;transl_table=11 PYKB01001154.1 Genbank gene 1093 1533 . - . ID=gene-C9F09_19505;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=C9F09_19505 PYKB01001154.1 Protein Homology CDS 1093 1533 . - 0 ID=cds-TGC84600.1;Parent=gene-C9F09_19505;Dbxref=NCBI_GP:TGC84600.1;Name=TGC84600.1;gbkey=CDS;gene=hpaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=C9F09_19505;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=TGC84600.1;transl_table=11 PYKB01001154.1 Genbank pseudogene 1808 3097 . + . ID=gene-C9F09_19510;Name=C9F09_19510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_19510;pseudo=true PYKB01001154.1 Protein Homology CDS 1808 3097 . + 0 ID=cds-C9F09_19510;Parent=gene-C9F09_19510;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455598.1;locus_tag=C9F09_19510;product=4-hydroxyphenylacetate degradation protein;pseudo=true;transl_table=11 PYKB01001154.1 Genbank gene 3094 4560 . + . ID=gene-C9F09_19515;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=C9F09_19515 PYKB01001154.1 Protein Homology CDS 3094 4560 . + 0 ID=cds-TGC84601.1;Parent=gene-C9F09_19515;Dbxref=NCBI_GP:TGC84601.1;Name=TGC84601.1;gbkey=CDS;gene=hpaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=C9F09_19515;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=TGC84601.1;transl_table=11 PYKB01001154.1 Genbank gene 4562 5413 . + . ID=gene-C9F09_19520;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=C9F09_19520 PYKB01001154.1 Protein Homology CDS 4562 5413 . + 0 ID=cds-TGC84602.1;Parent=gene-C9F09_19520;Dbxref=NCBI_GP:TGC84602.1;Name=TGC84602.1;gbkey=CDS;gene=hpaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=C9F09_19520;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=TGC84602.1;transl_table=11 PYKB01001154.1 Genbank gene 5423 5803 . + . ID=gene-C9F09_19525;Name=C9F09_19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19525 PYKB01001154.1 Protein Homology CDS 5423 5803 . + 0 ID=cds-TGC84603.1;Parent=gene-C9F09_19525;Dbxref=NCBI_GP:TGC84603.1;Name=TGC84603.1;Note=catalyzes the formation of 5-oxo-pent-3-ene-1%2C2%2C5-tricarboxylic acid from 5-carboxymethyl-2-hydroxy-muconic acid;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455600.1;locus_tag=C9F09_19525;product=5-carboxymethyl-2-hydroxymuconate delta-isomerase;protein_id=TGC84603.1;transl_table=11 PYKB01001154.1 Genbank gene 5767 5967 . - . ID=gene-C9F09_19530;Name=C9F09_19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19530 PYKB01001154.1 Protein Homology CDS 5767 5967 . - 0 ID=cds-TGC84604.1;Parent=gene-C9F09_19530;Dbxref=NCBI_GP:TGC84604.1;Name=TGC84604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568399.1;locus_tag=C9F09_19530;product=hypothetical protein;protein_id=TGC84604.1;transl_table=11 PYKB01001154.1 Genbank gene 5947 6481 . + . ID=gene-C9F09_19535;Name=C9F09_19535;end_range=6481,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19535;partial=true PYKB01001154.1 Protein Homology CDS 5947 6481 . + 0 ID=cds-TGC84605.1;Parent=gene-C9F09_19535;Dbxref=NCBI_GP:TGC84605.1;Name=TGC84605.1;end_range=6481,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455601.1;locus_tag=C9F09_19535;partial=true;product=2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase;protein_id=TGC84605.1;transl_table=11 ##sequence-region PYKB01000154.1 1 268 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000154.1 Genbank region 1 268 . + . ID=PYKB01000154.1:1..268;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000154.1 Genbank gene 1 268 . + . ID=gene-C9F09_01725;Name=C9F09_01725;end_range=268,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01725;partial=true;start_range=.,1 PYKB01000154.1 Protein Homology CDS 1 268 . + 0 ID=cds-TGD04481.1;Parent=gene-C9F09_01725;Dbxref=NCBI_GP:TGD04481.1;Name=TGD04481.1;end_range=268,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458804.1;locus_tag=C9F09_01725;partial=true;product=hypothetical protein;protein_id=TGD04481.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001055.1 1 266 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001055.1 Genbank region 1 266 . + . ID=PYKB01001055.1:1..266;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001055.1 Genbank pseudogene 1 174 . + . ID=gene-C9F09_17710;Name=C9F09_17710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17710;pseudo=true PYKB01001055.1 Protein Homology CDS 1 174 . + 0 ID=cds-C9F09_17710;Parent=gene-C9F09_17710;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025205684.1;locus_tag=C9F09_17710;product=FosA family fosfomycin resistance glutathione transferase;pseudo=true;transl_table=11 ##sequence-region PYKB01001598.1 1 266 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001598.1 Genbank region 1 266 . + . ID=PYKB01001598.1:1..266;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001598.1 Genbank gene 1 266 . - . ID=gene-C9F09_28080;Name=C9F09_28080;end_range=266,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28080;partial=true;start_range=.,1 PYKB01001598.1 Protein Homology CDS 1 266 . - 2 ID=cds-TGC74894.1;Parent=gene-C9F09_28080;Dbxref=NCBI_GP:TGC74894.1;Name=TGC74894.1;end_range=266,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001005898.1;locus_tag=C9F09_28080;partial=true;product=hypothetical protein;protein_id=TGC74894.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000157.1 1 266 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000157.1 Genbank region 1 266 . + . ID=PYKB01000157.1:1..266;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000157.1 Genbank gene 95 266 . + . ID=gene-C9F09_01745;Name=C9F09_01745;end_range=266,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01745;partial=true PYKB01000157.1 Protein Homology CDS 95 266 . + 0 ID=cds-TGD04310.1;Parent=gene-C9F09_01745;Dbxref=NCBI_GP:TGD04310.1;Name=TGD04310.1;end_range=266,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458588.1;locus_tag=C9F09_01745;partial=true;product=phosphonoacetate hydrolase;protein_id=TGD04310.1;transl_table=11 ##sequence-region PYKB01001116.1 1 263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001116.1 Genbank region 1 263 . + . ID=PYKB01001116.1:1..263;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001116.1 Genbank gene 1 263 . - . ID=gene-C9F09_18770;Name=C9F09_18770;end_range=263,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18770;partial=true;start_range=.,1 PYKB01001116.1 Protein Homology CDS 1 263 . - 1 ID=cds-TGC85610.1;Parent=gene-C9F09_18770;Dbxref=NCBI_GP:TGC85610.1;Name=TGC85610.1;end_range=263,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458787.1;locus_tag=C9F09_18770;partial=true;product=phosphatidylserine decarboxylase;protein_id=TGC85610.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000150.1 1 262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000150.1 Genbank region 1 262 . + . ID=PYKB01000150.1:1..262;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000150.1 Genbank gene 1 262 . - . ID=gene-C9F09_01700;Name=C9F09_01700;end_range=262,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01700;partial=true;start_range=.,1 PYKB01000150.1 Protein Homology CDS 1 262 . - 0 ID=cds-TGD04495.1;Parent=gene-C9F09_01700;Dbxref=NCBI_GP:TGD04495.1;Name=TGD04495.1;end_range=262,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=C9F09_01700;partial=true;product=hypothetical protein;protein_id=TGD04495.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000214.1 1 262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000214.1 Genbank region 1 262 . + . ID=PYKB01000214.1:1..262;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000214.1 Genbank gene 1 262 . - . ID=gene-C9F09_02305;Name=C9F09_02305;end_range=262,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02305;partial=true;start_range=.,1 PYKB01000214.1 Protein Homology CDS 1 262 . - 0 ID=cds-TGD03455.1;Parent=gene-C9F09_02305;Dbxref=NCBI_GP:TGD03455.1;Name=TGD03455.1;end_range=262,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=C9F09_02305;partial=true;product=hypothetical protein;protein_id=TGD03455.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000540.1 1 261 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000540.1 Genbank region 1 261 . + . ID=PYKB01000540.1:1..261;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000540.1 Genbank gene 1 261 . + . ID=gene-C9F09_07365;Name=C9F09_07365;end_range=261,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07365;partial=true;start_range=.,1 PYKB01000540.1 Protein Homology CDS 1 261 . + 0 ID=cds-TGC96746.1;Parent=gene-C9F09_07365;Dbxref=NCBI_GP:TGC96746.1;Name=TGC96746.1;end_range=261,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454774.1;locus_tag=C9F09_07365;partial=true;product=hypothetical protein;protein_id=TGC96746.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000242.1 1 261 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000242.1 Genbank region 1 261 . + . ID=PYKB01000242.1:1..261;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000242.1 Genbank pseudogene 53 205 . + . ID=gene-C9F09_02615;Name=C9F09_02615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02615;pseudo=true PYKB01000242.1 Protein Homology CDS 53 205 . + 0 ID=cds-C9F09_02615;Parent=gene-C9F09_02615;Note=enterobacterial common antigen polymerase%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312754.1;locus_tag=C9F09_02615;product=O-antigen assembly polymerase;pseudo=true;transl_table=11 ##sequence-region PYKB01001260.1 1 261 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001260.1 Genbank region 1 261 . + . ID=PYKB01001260.1:1..261;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001260.1 Genbank pseudogene 1 199 . - . ID=gene-C9F09_21545;Name=C9F09_21545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21545;pseudo=true PYKB01001260.1 Protein Homology CDS 1 199 . - 0 ID=cds-C9F09_21545;Parent=gene-C9F09_21545;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455739.1;locus_tag=C9F09_21545;product=nitrate reductase subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKB01001379.1 1 6456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001379.1 Genbank region 1 6456 . + . ID=PYKB01001379.1:1..6456;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001379.1 Genbank gene 1 1182 . + . ID=gene-C9F09_23750;Name=C9F09_23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23750;partial=true;start_range=.,1 PYKB01001379.1 Protein Homology CDS 1 1182 . + 0 ID=cds-TGC79881.1;Parent=gene-C9F09_23750;Dbxref=NCBI_GP:TGC79881.1;Name=TGC79881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457725.1;locus_tag=C9F09_23750;partial=true;product=serine endoprotease DegQ;protein_id=TGC79881.1;start_range=.,1;transl_table=11 PYKB01001379.1 Genbank gene 1275 2345 . + . ID=gene-C9F09_23755;Name=C9F09_23755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23755 PYKB01001379.1 Protein Homology CDS 1275 2345 . + 0 ID=cds-TGC79882.1;Parent=gene-C9F09_23755;Dbxref=NCBI_GP:TGC79882.1;Name=TGC79882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457726.1;locus_tag=C9F09_23755;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=TGC79882.1;transl_table=11 PYKB01001379.1 Genbank gene 2379 3077 . - . ID=gene-C9F09_23760;Name=C9F09_23760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23760 PYKB01001379.1 Protein Homology CDS 2379 3077 . - 0 ID=cds-TGC79883.1;Parent=gene-C9F09_23760;Dbxref=NCBI_GP:TGC79883.1;Name=TGC79883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991998.1;locus_tag=C9F09_23760;product=hypothetical protein;protein_id=TGC79883.1;transl_table=11 PYKB01001379.1 Genbank gene 3130 4431 . - . ID=gene-C9F09_23765;Name=C9F09_23765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23765 PYKB01001379.1 Protein Homology CDS 3130 4431 . - 0 ID=cds-TGC79884.1;Parent=gene-C9F09_23765;Dbxref=NCBI_GP:TGC79884.1;Name=TGC79884.1;Note=catalyzes the formation of pyruvate from oxaloacetate%3B sodium translocating;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9F09_23765;product=sodium ion-translocating decarboxylase subunit beta;protein_id=TGC79884.1;transl_table=11 PYKB01001379.1 Genbank gene 4444 6213 . - . ID=gene-C9F09_23770;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=C9F09_23770 PYKB01001379.1 Protein Homology CDS 4444 6213 . - 0 ID=cds-TGC79885.1;Parent=gene-C9F09_23770;Dbxref=NCBI_GP:TGC79885.1;Name=TGC79885.1;gbkey=CDS;gene=oadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9F09_23770;product=oxaloacetate decarboxylase subunit alpha;protein_id=TGC79885.1;transl_table=11 PYKB01001379.1 Genbank gene 6230 6456 . - . ID=gene-C9F09_23775;Name=C9F09_23775;end_range=6456,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23775;partial=true PYKB01001379.1 Protein Homology CDS 6230 6456 . - 2 ID=cds-TGC79886.1;Parent=gene-C9F09_23775;Dbxref=NCBI_GP:TGC79886.1;Name=TGC79886.1;Note=catalyzes the decarboxylation of oxaloacetate to form pyruvate and carbon dioxide;end_range=6456,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459061.1;locus_tag=C9F09_23775;partial=true;product=oxaloacetate decarboxylase subunit gamma;protein_id=TGC79886.1;transl_table=11 ##sequence-region PYKB01001087.1 1 260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001087.1 Genbank region 1 260 . + . ID=PYKB01001087.1:1..260;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea ##sequence-region PYKB01000211.1 1 260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000211.1 Genbank region 1 260 . + . ID=PYKB01000211.1:1..260;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000211.1 Genbank gene 1 260 . + . ID=gene-C9F09_02285;Name=C9F09_02285;end_range=260,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02285;partial=true;start_range=.,1 PYKB01000211.1 Protein Homology CDS 1 260 . + 1 ID=cds-TGD03542.1;Parent=gene-C9F09_02285;Dbxref=NCBI_GP:TGD03542.1;Name=TGD03542.1;end_range=260,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455411.1;locus_tag=C9F09_02285;partial=true;product=PTS ascorbate transporter subunit IIC;protein_id=TGD03542.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000175.1 1 260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000175.1 Genbank region 1 260 . + . ID=PYKB01000175.1:1..260;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000175.1 Genbank pseudogene 1 245 . - . ID=gene-C9F09_01970;Name=C9F09_01970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01970;pseudo=true PYKB01000175.1 Protein Homology CDS 1 245 . - 0 ID=cds-C9F09_01970;Parent=gene-C9F09_01970;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=C9F09_01970;product=isocitrate dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKB01001579.1 1 260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001579.1 Genbank region 1 260 . + . ID=PYKB01001579.1:1..260;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001579.1 Genbank gene 1 260 . - . ID=gene-C9F09_27775;Name=C9F09_27775;end_range=260,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27775;partial=true;start_range=.,1 PYKB01001579.1 Protein Homology CDS 1 260 . - 2 ID=cds-TGC75267.1;Parent=gene-C9F09_27775;Dbxref=NCBI_GP:TGC75267.1;Name=TGC75267.1;Note=regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine;end_range=260,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456810.1;locus_tag=C9F09_27775;partial=true;product=bifunctional transcriptional activator/DNA repair enzyme protein Ada;protein_id=TGC75267.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001463.1 1 259 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001463.1 Genbank region 1 259 . + . ID=PYKB01001463.1:1..259;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001463.1 Genbank gene 1 259 . + . ID=gene-C9F09_25480;Name=C9F09_25480;end_range=259,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25480;partial=true;start_range=.,1 PYKB01001463.1 Protein Homology CDS 1 259 . + 0 ID=cds-TGC77967.1;Parent=gene-C9F09_25480;Dbxref=NCBI_GP:TGC77967.1;Name=TGC77967.1;Note=molecular chaperone;end_range=259,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=C9F09_25480;partial=true;product=molecular chaperone HtpG;protein_id=TGC77967.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000050.1 1 259 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000050.1 Genbank region 1 259 . + . ID=PYKB01000050.1:1..259;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000050.1 Genbank gene 1 259 . - . ID=gene-C9F09_00565;Name=C9F09_00565;end_range=259,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00565;partial=true;start_range=.,1 PYKB01000050.1 Protein Homology CDS 1 259 . - 1 ID=cds-TGD06525.1;Parent=gene-C9F09_00565;Dbxref=NCBI_GP:TGD06525.1;Name=TGD06525.1;end_range=259,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455192.1;locus_tag=C9F09_00565;partial=true;product=glutathione-dependent formaldehyde dehydrogenase;protein_id=TGD06525.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000215.1 1 226 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000215.1 Genbank region 1 226 . + . ID=PYKB01000215.1:1..226;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000215.1 Genbank pseudogene 40 226 . - . ID=gene-C9F09_02310;Name=C9F09_02310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02310;pseudo=true PYKB01000215.1 Protein Homology CDS 40 226 . - 1 ID=cds-C9F09_02310;Parent=gene-C9F09_02310;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455875.1;locus_tag=C9F09_02310;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000159.1 1 259 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000159.1 Genbank region 1 259 . + . ID=PYKB01000159.1:1..259;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000159.1 Genbank gene 1 259 . + . ID=gene-C9F09_01780;Name=C9F09_01780;end_range=259,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01780;partial=true;start_range=.,1 PYKB01000159.1 Protein Homology CDS 1 259 . + 0 ID=cds-TGD04305.1;Parent=gene-C9F09_01780;Dbxref=NCBI_GP:TGD04305.1;Name=TGD04305.1;end_range=259,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456342.1;locus_tag=C9F09_01780;partial=true;product=peptidoglycan synthase;protein_id=TGD04305.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000432.1 1 6453 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000432.1 Genbank region 1 6453 . + . ID=PYKB01000432.1:1..6453;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000432.1 Genbank pseudogene 6 1298 . + . ID=gene-C9F09_05165;Name=C9F09_05165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05165;pseudo=true PYKB01000432.1 Protein Homology CDS 6 1298 . + 0 ID=cds-C9F09_05165;Parent=gene-C9F09_05165;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=C9F09_05165;product=transcriptional regulator PtsJ;pseudo=true;transl_table=11 PYKB01000432.1 Genbank gene 1313 2032 . + . ID=gene-C9F09_05170;Name=C9F09_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05170 PYKB01000432.1 Protein Homology CDS 1313 2032 . + 0 ID=cds-TGC98955.1;Parent=gene-C9F09_05170;Dbxref=NCBI_GP:TGC98955.1;Name=TGC98955.1;Note=Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=C9F09_05170;product=GMP synthase;protein_id=TGC98955.1;transl_table=11 PYKB01000432.1 Genbank gene 2091 2471 . + . ID=gene-C9F09_05175;Name=C9F09_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05175 PYKB01000432.1 Protein Homology CDS 2091 2471 . + 0 ID=cds-TGC98956.1;Parent=gene-C9F09_05175;Dbxref=NCBI_GP:TGC98956.1;Name=TGC98956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461373.2;locus_tag=C9F09_05175;product=hypothetical protein;protein_id=TGC98956.1;transl_table=11 PYKB01000432.1 Genbank gene 2484 3023 . + . ID=gene-C9F09_05180;Name=C9F09_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05180 PYKB01000432.1 Protein Homology CDS 2484 3023 . + 0 ID=cds-TGC98957.1;Parent=gene-C9F09_05180;Dbxref=NCBI_GP:TGC98957.1;Name=TGC98957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461374.1;locus_tag=C9F09_05180;product=hypothetical protein;protein_id=TGC98957.1;transl_table=11 PYKB01000432.1 Genbank gene 2929 3135 . - . ID=gene-C9F09_05185;Name=C9F09_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05185 PYKB01000432.1 Protein Homology CDS 2929 3135 . - 0 ID=cds-TGC98958.1;Parent=gene-C9F09_05185;Dbxref=NCBI_GP:TGC98958.1;Name=TGC98958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540568.1;locus_tag=C9F09_05185;product=hypothetical protein;protein_id=TGC98958.1;transl_table=11 PYKB01000432.1 Genbank gene 3154 4065 . - . ID=gene-C9F09_05190;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=C9F09_05190 PYKB01000432.1 Protein Homology CDS 3154 4065 . - 0 ID=cds-TGC98959.1;Parent=gene-C9F09_05190;Dbxref=NCBI_GP:TGC98959.1;Name=TGC98959.1;Note=catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide;gbkey=CDS;gene=cysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=C9F09_05190;product=cysteine synthase B;protein_id=TGC98959.1;transl_table=11 PYKB01000432.1 Genbank gene 4133 5230 . - . ID=gene-C9F09_05195;Name=C9F09_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05195 PYKB01000432.1 Protein Homology CDS 4133 5230 . - 0 ID=cds-TGC98960.1;Parent=gene-C9F09_05195;Dbxref=NCBI_GP:TGC98960.1;Name=TGC98960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=C9F09_05195;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=TGC98960.1;transl_table=11 PYKB01000432.1 Genbank gene 5220 6095 . - . ID=gene-C9F09_05200;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=C9F09_05200 PYKB01000432.1 Protein Homology CDS 5220 6095 . - 0 ID=cds-TGC98961.1;Parent=gene-C9F09_05200;Dbxref=NCBI_GP:TGC98961.1;Name=TGC98961.1;gbkey=CDS;gene=cysW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=C9F09_05200;product=sulfate ABC transporter permease subunit CysW;protein_id=TGC98961.1;transl_table=11 PYKB01000432.1 Genbank gene 6095 6453 . - . ID=gene-C9F09_05205;Name=C9F09_05205;end_range=6453,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05205;partial=true PYKB01000432.1 Protein Homology CDS 6095 6453 . - 2 ID=cds-TGC98962.1;Parent=gene-C9F09_05205;Dbxref=NCBI_GP:TGC98962.1;Name=TGC98962.1;end_range=6453,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456978.1;locus_tag=C9F09_05205;partial=true;product=molybdate ABC transporter permease subunit;protein_id=TGC98962.1;transl_table=11 ##sequence-region PYKB01000250.1 1 258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000250.1 Genbank region 1 258 . + . ID=PYKB01000250.1:1..258;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea ##sequence-region PYKB01000333.1 1 258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000333.1 Genbank region 1 258 . + . ID=PYKB01000333.1:1..258;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea ##sequence-region PYKB01001206.1 1 257 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001206.1 Genbank region 1 257 . + . ID=PYKB01001206.1:1..257;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001206.1 Genbank gene 30 257 . + . ID=gene-C9F09_20530;Name=C9F09_20530;end_range=257,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20530;partial=true PYKB01001206.1 Protein Homology CDS 30 257 . + 0 ID=cds-TGC83371.1;Parent=gene-C9F09_20530;Dbxref=NCBI_GP:TGC83371.1;Name=TGC83371.1;Note=catalyzes the formation of pyruvate from oxaloacetate;end_range=257,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9F09_20530;partial=true;product=oxaloacetate decarboxylase;protein_id=TGC83371.1;transl_table=11 ##sequence-region PYKB01000045.1 1 257 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000045.1 Genbank region 1 257 . + . ID=PYKB01000045.1:1..257;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000045.1 Genbank gene 1 257 . + . ID=gene-C9F09_00510;Name=C9F09_00510;end_range=257,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00510;partial=true;start_range=.,1 PYKB01000045.1 Protein Homology CDS 1 257 . + 2 ID=cds-TGD06569.1;Parent=gene-C9F09_00510;Dbxref=NCBI_GP:TGD06569.1;Name=TGD06569.1;end_range=257,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=C9F09_00510;partial=true;product=hypothetical protein;protein_id=TGD06569.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000001.1 1 255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000001.1 Genbank region 1 255 . + . ID=PYKB01000001.1:1..255;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000001.1 Genbank gene 1 211 . - . ID=gene-C9F09_00005;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=C9F09_00005;partial=true;start_range=.,1 PYKB01000001.1 Protein Homology CDS 1 211 . - 0 ID=cds-TGD07366.1;Parent=gene-C9F09_00005;Dbxref=NCBI_GP:TGD07366.1;Name=TGD07366.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016960285.1;locus_tag=C9F09_00005;partial=true;product=phosphopyruvate hydratase;protein_id=TGD07366.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000405.1 1 255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000405.1 Genbank region 1 255 . + . ID=PYKB01000405.1:1..255;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000405.1 Genbank pseudogene 71 255 . + . ID=gene-C9F09_04580;Name=C9F09_04580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04580;pseudo=true PYKB01000405.1 Protein Homology CDS 71 255 . + 0 ID=cds-C9F09_04580;Parent=gene-C9F09_04580;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455558.1;locus_tag=C9F09_04580;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000141.1 1 254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000141.1 Genbank region 1 254 . + . ID=PYKB01000141.1:1..254;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000141.1 Genbank gene 1 254 . - . ID=gene-C9F09_01620;Name=C9F09_01620;end_range=254,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01620;partial=true;start_range=.,1 PYKB01000141.1 Protein Homology CDS 1 254 . - 2 ID=cds-TGD04610.1;Parent=gene-C9F09_01620;Dbxref=NCBI_GP:TGD04610.1;Name=TGD04610.1;end_range=254,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455152.1;locus_tag=C9F09_01620;partial=true;product=hypothetical protein;protein_id=TGD04610.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000649.1 1 254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000649.1 Genbank region 1 254 . + . ID=PYKB01000649.1:1..254;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000649.1 Genbank gene 70 254 . + . ID=gene-C9F09_09750;Name=C9F09_09750;end_range=254,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09750;partial=true PYKB01000649.1 Protein Homology CDS 70 254 . + 0 ID=cds-TGC94395.1;Parent=gene-C9F09_09750;Dbxref=NCBI_GP:TGC94395.1;Name=TGC94395.1;end_range=254,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454666.1;locus_tag=C9F09_09750;partial=true;product=oxaloacetate decarboxylase;protein_id=TGC94395.1;transl_table=11 ##sequence-region PYKB01001385.1 1 254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001385.1 Genbank region 1 254 . + . ID=PYKB01001385.1:1..254;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001385.1 Genbank gene 1 254 . - . ID=gene-C9F09_23885;Name=C9F09_23885;end_range=254,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23885;partial=true;start_range=.,1 PYKB01001385.1 Protein Homology CDS 1 254 . - 1 ID=cds-TGC79775.1;Parent=gene-C9F09_23885;Dbxref=NCBI_GP:TGC79775.1;Name=TGC79775.1;end_range=254,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=C9F09_23885;partial=true;product=MFS transporter;protein_id=TGC79775.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001267.1 1 6450 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001267.1 Genbank region 1 6450 . + . ID=PYKB01001267.1:1..6450;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001267.1 Genbank gene 1 272 . + . ID=gene-C9F09_21645;Name=C9F09_21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21645;partial=true;start_range=.,1 PYKB01001267.1 Protein Homology CDS 1 272 . + 2 ID=cds-TGC82229.1;Parent=gene-C9F09_21645;Dbxref=NCBI_GP:TGC82229.1;Name=TGC82229.1;Note=NorM%3B MdtK%3B functions as a Na(+)/drug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456105.1;locus_tag=C9F09_21645;partial=true;product=MATE family efflux transporter;protein_id=TGC82229.1;start_range=.,1;transl_table=11 PYKB01001267.1 Genbank gene 424 500 . + . ID=gene-C9F09_21650;Name=C9F09_21650;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_21650 PYKB01001267.1 tRNAscan-SE tRNA 424 500 . + . ID=rna-C9F09_21650;Parent=gene-C9F09_21650;anticodon=(pos:458..460);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_21650;product=tRNA-Val PYKB01001267.1 tRNAscan-SE exon 424 500 . + . ID=exon-C9F09_21650-1;Parent=rna-C9F09_21650;anticodon=(pos:458..460);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_21650;product=tRNA-Val PYKB01001267.1 Genbank gene 511 587 . + . ID=gene-C9F09_21655;Name=C9F09_21655;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_21655 PYKB01001267.1 tRNAscan-SE tRNA 511 587 . + . ID=rna-C9F09_21655;Parent=gene-C9F09_21655;anticodon=(pos:545..547);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_21655;product=tRNA-Val PYKB01001267.1 tRNAscan-SE exon 511 587 . + . ID=exon-C9F09_21655-1;Parent=rna-C9F09_21655;anticodon=(pos:545..547);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_21655;product=tRNA-Val PYKB01001267.1 Genbank gene 744 1802 . - . ID=gene-C9F09_21660;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=C9F09_21660 PYKB01001267.1 Protein Homology CDS 744 1802 . - 0 ID=cds-TGC82230.1;Parent=gene-C9F09_21660;Dbxref=NCBI_GP:TGC82230.1;Name=TGC82230.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456106.1;locus_tag=C9F09_21660;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=TGC82230.1;transl_table=11 PYKB01001267.1 Genbank gene 1799 2578 . - . ID=gene-C9F09_21665;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=C9F09_21665 PYKB01001267.1 Protein Homology CDS 1799 2578 . - 0 ID=cds-TGC82231.1;Parent=gene-C9F09_21665;Dbxref=NCBI_GP:TGC82231.1;Name=TGC82231.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456107.1;locus_tag=C9F09_21665;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=TGC82231.1;transl_table=11 PYKB01001267.1 Genbank gene 2579 2845 . - . ID=gene-C9F09_21670;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=C9F09_21670 PYKB01001267.1 Protein Homology CDS 2579 2845 . - 0 ID=cds-TGC82232.1;Parent=gene-C9F09_21670;Dbxref=NCBI_GP:TGC82232.1;Name=TGC82232.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=C9F09_21670;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=TGC82232.1;transl_table=11 PYKB01001267.1 Genbank gene 2842 3489 . - . ID=gene-C9F09_21675;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=C9F09_21675 PYKB01001267.1 Protein Homology CDS 2842 3489 . - 0 ID=cds-TGC82233.1;Parent=gene-C9F09_21675;Dbxref=NCBI_GP:TGC82233.1;Name=TGC82233.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=C9F09_21675;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=TGC82233.1;transl_table=11 PYKB01001267.1 Genbank gene 3557 4525 . - . ID=gene-C9F09_21680;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=C9F09_21680 PYKB01001267.1 Protein Homology CDS 3557 4525 . - 0 ID=cds-TGC82234.1;Parent=gene-C9F09_21680;Dbxref=NCBI_GP:TGC82234.1;Name=TGC82234.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=C9F09_21680;product=SPI-2 type III secretion system apparatus protein SsaQ;protein_id=TGC82234.1;transl_table=11 PYKB01001267.1 Genbank gene 4506 4880 . - . ID=gene-C9F09_21685;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=C9F09_21685 PYKB01001267.1 Protein Homology CDS 4506 4880 . - 0 ID=cds-TGC82235.1;Parent=gene-C9F09_21685;Dbxref=NCBI_GP:TGC82235.1;Name=TGC82235.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456111.1;locus_tag=C9F09_21685;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=TGC82235.1;transl_table=11 PYKB01001267.1 Genbank gene 4861 5238 . - . ID=gene-C9F09_21690;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=C9F09_21690 PYKB01001267.1 Protein Homology CDS 4861 5238 . - 0 ID=cds-TGC82236.1;Parent=gene-C9F09_21690;Dbxref=NCBI_GP:TGC82236.1;Name=TGC82236.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=C9F09_21690;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=TGC82236.1;transl_table=11 PYKB01001267.1 Genbank gene 5241 6450 . - . ID=gene-C9F09_21695;Name=C9F09_21695;end_range=6450,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21695;partial=true PYKB01001267.1 Protein Homology CDS 5241 6450 . - 1 ID=cds-TGC82237.1;Parent=gene-C9F09_21695;Dbxref=NCBI_GP:TGC82237.1;Name=TGC82237.1;end_range=6450,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=C9F09_21695;partial=true;product=EscN/YscN/HrcN family type III secretion system ATPase;protein_id=TGC82237.1;transl_table=11 ##sequence-region PYKB01000197.1 1 254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000197.1 Genbank region 1 254 . + . ID=PYKB01000197.1:1..254;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000197.1 Genbank gene 1 254 . - . ID=gene-C9F09_02180;Name=C9F09_02180;end_range=254,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02180;partial=true;start_range=.,1 PYKB01000197.1 Protein Homology CDS 1 254 . - 2 ID=cds-TGD03726.1;Parent=gene-C9F09_02180;Dbxref=NCBI_GP:TGD03726.1;Name=TGD03726.1;end_range=254,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454677.1;locus_tag=C9F09_02180;partial=true;product=hypothetical protein;protein_id=TGD03726.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000266.1 1 254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000266.1 Genbank region 1 254 . + . ID=PYKB01000266.1:1..254;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000266.1 Genbank gene 1 254 . + . ID=gene-C9F09_03000;Name=C9F09_03000;end_range=254,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03000;partial=true;start_range=.,1 PYKB01000266.1 Protein Homology CDS 1 254 . + 1 ID=cds-TGD02073.1;Parent=gene-C9F09_03000;Dbxref=NCBI_GP:TGD02073.1;Name=TGD02073.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;end_range=254,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312738.1;locus_tag=C9F09_03000;partial=true;product=ATP-dependent DNA helicase Rep;protein_id=TGD02073.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001288.1 1 253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001288.1 Genbank region 1 253 . + . ID=PYKB01001288.1:1..253;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001288.1 Genbank gene 1 144 . - . ID=gene-C9F09_22035;Name=C9F09_22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22035;partial=true;start_range=.,1 PYKB01001288.1 Protein Homology CDS 1 144 . - 0 ID=cds-TGC81872.1;Parent=gene-C9F09_22035;Dbxref=NCBI_GP:TGC81872.1;Name=TGC81872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458148.1;locus_tag=C9F09_22035;partial=true;product=histidine kinase;protein_id=TGC81872.1;start_range=.,1;transl_table=11 PYKB01001288.1 Genbank gene 144 253 . - . ID=gene-C9F09_22040;Name=C9F09_22040;end_range=253,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22040;partial=true PYKB01001288.1 Protein Homology CDS 144 253 . - 2 ID=cds-TGC81871.1;Parent=gene-C9F09_22040;Dbxref=NCBI_GP:TGC81871.1;Name=TGC81871.1;Note=response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter;end_range=253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=C9F09_22040;partial=true;product=transcriptional regulator UhpA;protein_id=TGC81871.1;transl_table=11 ##sequence-region PYKB01000025.1 1 253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000025.1 Genbank region 1 253 . + . ID=PYKB01000025.1:1..253;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000025.1 Genbank gene 1 253 . - . ID=gene-C9F09_00300;Name=C9F09_00300;end_range=253,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00300;partial=true;start_range=.,1 PYKB01000025.1 Protein Homology CDS 1 253 . - 0 ID=cds-TGD06923.1;Parent=gene-C9F09_00300;Dbxref=NCBI_GP:TGD06923.1;Name=TGD06923.1;end_range=253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457352.1;locus_tag=C9F09_00300;partial=true;product=GTP pyrophosphokinase;protein_id=TGD06923.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000364.1 1 253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000364.1 Genbank region 1 253 . + . ID=PYKB01000364.1:1..253;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea ##sequence-region PYKB01001663.1 1 252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001663.1 Genbank region 1 252 . + . ID=PYKB01001663.1:1..252;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001663.1 Genbank pseudogene 1 182 . + . ID=gene-C9F09_28955;Name=C9F09_28955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28955;pseudo=true PYKB01001663.1 Protein Homology CDS 1 182 . + 2 ID=cds-C9F09_28955;Parent=gene-C9F09_28955;Note=citrate-ACP transferase%2C the alpha subunit catalyzes the formation of (3S)-citryl-CoA from acetyl-CoA and citrate%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455198.1;locus_tag=C9F09_28955;product=citrate lyase subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKB01001569.1 1 251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001569.1 Genbank region 1 251 . + . ID=PYKB01001569.1:1..251;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001569.1 Genbank pseudogene 1 189 . + . ID=gene-C9F09_27395;Name=C9F09_27395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_27395;pseudo=true PYKB01001569.1 Protein Homology CDS 1 189 . + 0 ID=cds-C9F09_27395;Parent=gene-C9F09_27395;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033733.1;locus_tag=C9F09_27395;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000365.1 1 249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000365.1 Genbank region 1 249 . + . ID=PYKB01000365.1:1..249;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000365.1 Genbank gene 1 249 . + . ID=gene-C9F09_04115;Name=C9F09_04115;end_range=249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04115;partial=true;start_range=.,1 PYKB01000365.1 Protein Homology CDS 1 249 . + 2 ID=cds-TGD00213.1;Parent=gene-C9F09_04115;Dbxref=NCBI_GP:TGD00213.1;Name=TGD00213.1;Note=high-affinity transporter for xanthine;end_range=249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312557.1;locus_tag=C9F09_04115;partial=true;product=xanthine permease XanP;protein_id=TGD00213.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000898.1 1 249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000898.1 Genbank region 1 249 . + . ID=PYKB01000898.1:1..249;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000898.1 Genbank gene 1 249 . - . ID=gene-C9F09_14800;Name=C9F09_14800;end_range=249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14800;partial=true;start_range=.,1 PYKB01000898.1 Protein Homology CDS 1 249 . - 2 ID=cds-TGC90200.1;Parent=gene-C9F09_14800;Dbxref=NCBI_GP:TGC90200.1;Name=TGC90200.1;end_range=249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457379.1;locus_tag=C9F09_14800;partial=true;product=hypothetical protein;protein_id=TGC90200.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001319.1 1 248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001319.1 Genbank region 1 248 . + . ID=PYKB01001319.1:1..248;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001319.1 Genbank gene 1 248 . - . ID=gene-C9F09_22680;Name=narH;end_range=248,.;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=C9F09_22680;partial=true;start_range=.,1 PYKB01001319.1 Protein Homology CDS 1 248 . - 0 ID=cds-TGC81148.1;Parent=gene-C9F09_22680;Dbxref=NCBI_GP:TGC81148.1;Name=TGC81148.1;Note=with NarGJI catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high;end_range=248,.;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455740.1;locus_tag=C9F09_22680;partial=true;product=nitrate reductase subunit beta;protein_id=TGC81148.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000924.1 1 6445 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000924.1 Genbank region 1 6445 . + . ID=PYKB01000924.1:1..6445;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000924.1 Genbank gene 1 471 . - . ID=gene-C9F09_15210;Name=C9F09_15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15210;partial=true;start_range=.,1 PYKB01000924.1 Protein Homology CDS 1 471 . - 0 ID=cds-TGC89782.1;Parent=gene-C9F09_15210;Dbxref=NCBI_GP:TGC89782.1;Name=TGC89782.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455414.1;locus_tag=C9F09_15210;partial=true;product=arginine ABC transporter substrate-binding protein;protein_id=TGC89782.1;start_range=.,1;transl_table=11 PYKB01000924.1 Genbank gene 708 1376 . - . ID=gene-C9F09_15215;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=C9F09_15215 PYKB01000924.1 Protein Homology CDS 708 1376 . - 0 ID=cds-TGC89783.1;Parent=gene-C9F09_15215;Dbxref=NCBI_GP:TGC89783.1;Name=TGC89783.1;Note=with ArtPQJI acts to transport arginine across the inner membrane;gbkey=CDS;gene=artM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455415.1;locus_tag=C9F09_15215;product=arginine transporter permease subunit ArtM;protein_id=TGC89783.1;transl_table=11 PYKB01000924.1 Genbank gene 1376 2092 . - . ID=gene-C9F09_15220;Name=C9F09_15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15220 PYKB01000924.1 Protein Homology CDS 1376 2092 . - 0 ID=cds-TGC89784.1;Parent=gene-C9F09_15220;Dbxref=NCBI_GP:TGC89784.1;Name=TGC89784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455416.1;locus_tag=C9F09_15220;product=arginine ABC transporter permease ArtQ;protein_id=TGC89784.1;transl_table=11 PYKB01000924.1 Genbank gene 2099 2830 . - . ID=gene-C9F09_15225;Name=C9F09_15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15225 PYKB01000924.1 Protein Homology CDS 2099 2830 . - 0 ID=cds-TGC89785.1;Parent=gene-C9F09_15225;Dbxref=NCBI_GP:TGC89785.1;Name=TGC89785.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455417.1;locus_tag=C9F09_15225;product=arginine/ornithine ABC transporter substrate-binding protein;protein_id=TGC89785.1;transl_table=11 PYKB01000924.1 Genbank gene 2848 3576 . - . ID=gene-C9F09_15230;Name=C9F09_15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15230 PYKB01000924.1 Protein Homology CDS 2848 3576 . - 0 ID=cds-TGC89786.1;Parent=gene-C9F09_15230;Dbxref=NCBI_GP:TGC89786.1;Name=TGC89786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=C9F09_15230;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=TGC89786.1;transl_table=11 PYKB01000924.1 Genbank gene 3806 4321 . - . ID=gene-C9F09_15235;Name=C9F09_15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15235 PYKB01000924.1 Protein Homology CDS 3806 4321 . - 0 ID=cds-TGC89787.1;Parent=gene-C9F09_15235;Dbxref=NCBI_GP:TGC89787.1;Name=TGC89787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=C9F09_15235;product=lipoprotein;protein_id=TGC89787.1;transl_table=11 PYKB01000924.1 Genbank gene 4449 4772 . + . ID=gene-C9F09_15240;Name=C9F09_15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15240 PYKB01000924.1 Protein Homology CDS 4449 4772 . + 0 ID=cds-TGC89788.1;Parent=gene-C9F09_15240;Dbxref=NCBI_GP:TGC89788.1;Name=TGC89788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455420.1;locus_tag=C9F09_15240;product=hypothetical protein;protein_id=TGC89788.1;transl_table=11 PYKB01000924.1 Genbank gene 4769 5599 . + . ID=gene-C9F09_15245;Name=C9F09_15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15245 PYKB01000924.1 Protein Homology CDS 4769 5599 . + 0 ID=cds-TGC89789.1;Parent=gene-C9F09_15245;Dbxref=NCBI_GP:TGC89789.1;Name=TGC89789.1;Note=catalyzes the cleavage of the bond between muamic acid and l-alanine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455421.1;locus_tag=C9F09_15245;product=N-acetylmuramoyl-L-alanine amidase;protein_id=TGC89789.1;transl_table=11 PYKB01000924.1 Genbank gene 5596 6445 . - . ID=gene-C9F09_15250;Name=C9F09_15250;end_range=6445,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15250;partial=true PYKB01000924.1 Protein Homology CDS 5596 6445 . - 1 ID=cds-TGC89790.1;Parent=gene-C9F09_15250;Dbxref=NCBI_GP:TGC89790.1;Name=TGC89790.1;end_range=6445,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455422.1;locus_tag=C9F09_15250;partial=true;product=hypothetical protein;protein_id=TGC89790.1;transl_table=11 ##sequence-region PYKB01000260.1 1 14315 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000260.1 Genbank region 1 14315 . + . ID=PYKB01000260.1:1..14315;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000260.1 Genbank gene 144 1076 . - . ID=gene-C9F09_02880;Name=C9F09_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02880 PYKB01000260.1 Protein Homology CDS 144 1076 . - 0 ID=cds-TGD02252.1;Parent=gene-C9F09_02880;Dbxref=NCBI_GP:TGD02252.1;Name=TGD02252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461833.1;locus_tag=C9F09_02880;product=LysR family transcriptional regulator;protein_id=TGD02252.1;transl_table=11 PYKB01000260.1 Genbank gene 1164 2372 . + . ID=gene-C9F09_02885;Name=C9F09_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02885 PYKB01000260.1 Protein Homology CDS 1164 2372 . + 0 ID=cds-TGD02253.1;Parent=gene-C9F09_02885;Dbxref=NCBI_GP:TGD02253.1;Name=TGD02253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461832.1;locus_tag=C9F09_02885;product=MFS transporter;protein_id=TGD02253.1;transl_table=11 PYKB01000260.1 Genbank gene 2369 2749 . + . ID=gene-C9F09_02890;Name=C9F09_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02890 PYKB01000260.1 Protein Homology CDS 2369 2749 . + 0 ID=cds-TGD02254.1;Parent=gene-C9F09_02890;Dbxref=NCBI_GP:TGD02254.1;Name=TGD02254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=C9F09_02890;product=DUF4440 domain-containing protein;protein_id=TGD02254.1;transl_table=11 PYKB01000260.1 Genbank gene 2817 5372 . - . ID=gene-C9F09_02895;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=C9F09_02895 PYKB01000260.1 Protein Homology CDS 2817 5372 . - 0 ID=cds-TGD02255.1;Parent=gene-C9F09_02895;Dbxref=NCBI_GP:TGD02255.1;Name=TGD02255.1;gbkey=CDS;gene=mutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457300.1;locus_tag=C9F09_02895;product=DNA mismatch repair protein MutS;protein_id=TGD02255.1;transl_table=11 PYKB01000260.1 Genbank gene 5530 6051 . + . ID=gene-C9F09_02900;Name=C9F09_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02900 PYKB01000260.1 Protein Homology CDS 5530 6051 . + 0 ID=cds-TGD02256.1;Parent=gene-C9F09_02900;Dbxref=NCBI_GP:TGD02256.1;Name=TGD02256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=C9F09_02900;product=cytoplasmic protein;protein_id=TGD02256.1;transl_table=11 PYKB01000260.1 Genbank gene 6223 6879 . - . ID=gene-C9F09_02905;Name=C9F09_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02905 PYKB01000260.1 Protein Homology CDS 6223 6879 . - 0 ID=cds-TGD02257.1;Parent=gene-C9F09_02905;Dbxref=NCBI_GP:TGD02257.1;Name=TGD02257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=C9F09_02905;product=serine/threonine protein phosphatase;protein_id=TGD02257.1;transl_table=11 PYKB01000260.1 Genbank pseudogene 7012 7077 . + . ID=gene-C9F09_02910;Name=C9F09_02910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02910;pseudo=true PYKB01000260.1 Protein Homology CDS 7012 7077 . + 0 ID=cds-C9F09_02910;Parent=gene-C9F09_02910;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922865.1;locus_tag=C9F09_02910;product=AlpA family transcriptional regulator;pseudo=true;transl_table=11 PYKB01000260.1 Genbank pseudogene 7214 7432 . + . ID=gene-C9F09_02915;Name=C9F09_02915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02915;pseudo=true PYKB01000260.1 Protein Homology CDS 7214 7432 . + 0 ID=cds-C9F09_02915;Parent=gene-C9F09_02915;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491235.1;locus_tag=C9F09_02915;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PYKB01000260.1 Genbank gene 7505 8032 . - . ID=gene-C9F09_02920;Name=C9F09_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02920 PYKB01000260.1 Protein Homology CDS 7505 8032 . - 0 ID=cds-TGD02258.1;Parent=gene-C9F09_02920;Dbxref=NCBI_GP:TGD02258.1;Name=TGD02258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457296.1;locus_tag=C9F09_02920;product=N-acetyltransferase;protein_id=TGD02258.1;transl_table=11 PYKB01000260.1 Genbank gene 8029 8319 . - . ID=gene-C9F09_02925;Name=C9F09_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02925 PYKB01000260.1 Protein Homology CDS 8029 8319 . - 0 ID=cds-TGD02259.1;Parent=gene-C9F09_02925;Dbxref=NCBI_GP:TGD02259.1;Name=TGD02259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457295.1;locus_tag=C9F09_02925;product=DUF1778 domain-containing protein;protein_id=TGD02259.1;transl_table=11 PYKB01000260.1 Genbank pseudogene 8586 8778 . - . ID=gene-C9F09_02930;Name=C9F09_02930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02930;pseudo=true PYKB01000260.1 Protein Homology CDS 8586 8778 . - 0 ID=cds-C9F09_02930;Parent=gene-C9F09_02930;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=C9F09_02930;product=IS3 family transposase;pseudo=true;transl_table=11 PYKB01000260.1 Genbank gene 9019 9345 . + . ID=gene-C9F09_02935;Name=C9F09_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02935 PYKB01000260.1 Protein Homology CDS 9019 9345 . + 0 ID=cds-TGD02260.1;Parent=gene-C9F09_02935;Dbxref=NCBI_GP:TGD02260.1;Name=TGD02260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461824.1;locus_tag=C9F09_02935;product=hypothetical protein;protein_id=TGD02260.1;transl_table=11 PYKB01000260.1 Genbank gene 9618 9965 . - . ID=gene-C9F09_02940;Name=C9F09_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02940 PYKB01000260.1 Protein Homology CDS 9618 9965 . - 0 ID=cds-TGD02261.1;Parent=gene-C9F09_02940;Dbxref=NCBI_GP:TGD02261.1;Name=TGD02261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461823.1;locus_tag=C9F09_02940;product=hypothetical protein;protein_id=TGD02261.1;transl_table=11 PYKB01000260.1 Genbank pseudogene 9950 10399 . - . ID=gene-C9F09_02945;Name=C9F09_02945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02945;pseudo=true PYKB01000260.1 Protein Homology CDS 9950 10399 . - 0 ID=cds-C9F09_02945;Parent=gene-C9F09_02945;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461822.1;locus_tag=C9F09_02945;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000260.1 Genbank gene 10831 11274 . - . ID=gene-C9F09_02950;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=C9F09_02950 PYKB01000260.1 Protein Homology CDS 10831 11274 . - 0 ID=cds-TGD02262.1;Parent=gene-C9F09_02950;Dbxref=NCBI_GP:TGD02262.1;Name=TGD02262.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457294.1;locus_tag=C9F09_02950;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=TGD02262.1;transl_table=11 PYKB01000260.1 Genbank gene 11731 12381 . + . ID=gene-C9F09_02955;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=C9F09_02955 PYKB01000260.1 Protein Homology CDS 11731 12381 . + 0 ID=cds-TGD02265.1;Parent=gene-C9F09_02955;Dbxref=NCBI_GP:TGD02265.1;Name=TGD02265.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457293.1;locus_tag=C9F09_02955;product=AraC family transcriptional regulator InvF;protein_id=TGD02265.1;transl_table=11 PYKB01000260.1 Genbank gene 12378 14066 . + . ID=gene-C9F09_02960;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=C9F09_02960 PYKB01000260.1 Protein Homology CDS 12378 14066 . + 0 ID=cds-TGD02263.1;Parent=gene-C9F09_02960;Dbxref=NCBI_GP:TGD02263.1;Name=TGD02263.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457292.1;locus_tag=C9F09_02960;product=type III secretion system outer membrane ring protein InvG;protein_id=TGD02263.1;transl_table=11 PYKB01000260.1 Genbank gene 14063 14315 . + . ID=gene-C9F09_02965;Name=C9F09_02965;end_range=14315,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02965;partial=true PYKB01000260.1 Protein Homology CDS 14063 14315 . + 0 ID=cds-TGD02264.1;Parent=gene-C9F09_02965;Dbxref=NCBI_GP:TGD02264.1;Name=TGD02264.1;Note=involved in regulation of genes necessary for the entry of Salmonella into host cells;end_range=14315,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=C9F09_02965;partial=true;product=SepL/TyeA/HrpJ family type III secretion system gatekeeper;protein_id=TGD02264.1;transl_table=11 ##sequence-region PYKB01000189.1 1 248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000189.1 Genbank region 1 248 . + . ID=PYKB01000189.1:1..248;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000189.1 Genbank pseudogene 1 215 . + . ID=gene-C9F09_02130;Name=C9F09_02130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02130;pseudo=true PYKB01000189.1 Protein Homology CDS 1 215 . + 0 ID=cds-C9F09_02130;Parent=gene-C9F09_02130;Note=frameshifted%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640476.1;locus_tag=C9F09_02130;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001360.1 1 248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001360.1 Genbank region 1 248 . + . ID=PYKB01001360.1:1..248;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001360.1 Genbank pseudogene 67 248 . - . ID=gene-C9F09_23370;Name=C9F09_23370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23370;pseudo=true PYKB01001360.1 Protein Homology CDS 67 248 . - 2 ID=cds-C9F09_23370;Parent=gene-C9F09_23370;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455096.1;locus_tag=C9F09_23370;product=paraslipin;pseudo=true;transl_table=11 ##sequence-region PYKB01000358.1 1 246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000358.1 Genbank region 1 246 . + . ID=PYKB01000358.1:1..246;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000358.1 Genbank pseudogene 1 149 . + . ID=gene-C9F09_04040;Name=C9F09_04040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04040;pseudo=true PYKB01000358.1 Protein Homology CDS 1 149 . + 2 ID=cds-C9F09_04040;Parent=gene-C9F09_04040;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456671.1;locus_tag=C9F09_04040;product=molecular chaperone;pseudo=true;transl_table=11 ##sequence-region PYKB01001003.1 1 246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001003.1 Genbank region 1 246 . + . ID=PYKB01001003.1:1..246;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001003.1 Genbank pseudogene 25 246 . - . ID=gene-C9F09_16755;Name=C9F09_16755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16755;pseudo=true PYKB01001003.1 Protein Homology CDS 25 246 . - 0 ID=cds-C9F09_16755;Parent=gene-C9F09_16755;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9F09_16755;product=heme lyase NrfEFG subunit NrfE;pseudo=true;transl_table=11 ##sequence-region PYKB01000208.1 1 246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000208.1 Genbank region 1 246 . + . ID=PYKB01000208.1:1..246;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000208.1 Genbank gene 1 246 . - . ID=gene-C9F09_02265;Name=C9F09_02265;end_range=246,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02265;partial=true;start_range=.,1 PYKB01000208.1 GeneMarkS+ CDS 1 246 . - 0 ID=cds-TGD03553.1;Parent=gene-C9F09_02265;Dbxref=NCBI_GP:TGD03553.1;Name=TGD03553.1;end_range=246,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_02265;partial=true;product=hypothetical protein;protein_id=TGD03553.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001678.1 1 245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001678.1 Genbank region 1 245 . + . ID=PYKB01001678.1:1..245;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001678.1 Genbank gene 1 245 . - . ID=gene-C9F09_29180;Name=C9F09_29180;end_range=245,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29180;partial=true;start_range=.,1 PYKB01001678.1 Protein Homology CDS 1 245 . - 2 ID=cds-TGC72855.1;Parent=gene-C9F09_29180;Dbxref=NCBI_GP:TGC72855.1;Name=TGC72855.1;end_range=245,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311341.1;locus_tag=C9F09_29180;partial=true;product=hypothetical protein;protein_id=TGC72855.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000108.1 1 245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000108.1 Genbank region 1 245 . + . ID=PYKB01000108.1:1..245;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000108.1 Genbank gene 1 245 . + . ID=gene-C9F09_01220;Name=C9F09_01220;end_range=245,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01220;partial=true;start_range=.,1 PYKB01000108.1 Protein Homology CDS 1 245 . + 1 ID=cds-TGD05310.1;Parent=gene-C9F09_01220;Dbxref=NCBI_GP:TGD05310.1;Name=TGD05310.1;end_range=245,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=C9F09_01220;partial=true;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=TGD05310.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000665.1 1 245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000665.1 Genbank region 1 245 . + . ID=PYKB01000665.1:1..245;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000665.1 Genbank gene 1 245 . - . ID=gene-C9F09_10000;Name=C9F09_10000;end_range=245,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10000;partial=true;start_range=.,1 PYKB01000665.1 Protein Homology CDS 1 245 . - 0 ID=cds-TGC94105.1;Parent=gene-C9F09_10000;Dbxref=NCBI_GP:TGC94105.1;Name=TGC94105.1;end_range=245,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456875.1;locus_tag=C9F09_10000;partial=true;product=hypothetical protein;protein_id=TGC94105.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001703.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001703.1 Genbank region 1 244 . + . ID=PYKB01001703.1:1..244;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001703.1 Genbank pseudogene 1 206 . + . ID=gene-C9F09_29795;Name=C9F09_29795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29795;pseudo=true PYKB01001703.1 Protein Homology CDS 1 206 . + 2 ID=cds-C9F09_29795;Parent=gene-C9F09_29795;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000289625.1;locus_tag=C9F09_29795;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001462.1 1 6438 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001462.1 Genbank region 1 6438 . + . ID=PYKB01001462.1:1..6438;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001462.1 Genbank gene 177 671 . - . ID=gene-C9F09_25450;Name=C9F09_25450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25450 PYKB01001462.1 Protein Homology CDS 177 671 . - 0 ID=cds-TGC77971.1;Parent=gene-C9F09_25450;Dbxref=NCBI_GP:TGC77971.1;Name=TGC77971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459935.1;locus_tag=C9F09_25450;product=leucine-responsive regulatory protein;protein_id=TGC77971.1;transl_table=11 PYKB01001462.1 Genbank gene 600 875 . + . ID=gene-C9F09_25455;Name=C9F09_25455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25455 PYKB01001462.1 Protein Homology CDS 600 875 . + 0 ID=cds-TGC77972.1;Parent=gene-C9F09_25455;Dbxref=NCBI_GP:TGC77972.1;Name=TGC77972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751915.1;locus_tag=C9F09_25455;product=hypothetical protein;protein_id=TGC77972.1;transl_table=11 PYKB01001462.1 Genbank gene 1218 2186 . + . ID=gene-C9F09_25460;Name=C9F09_25460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25460 PYKB01001462.1 Protein Homology CDS 1218 2186 . + 0 ID=cds-TGC77973.1;Parent=gene-C9F09_25460;Dbxref=NCBI_GP:TGC77973.1;Name=TGC77973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455446.1;locus_tag=C9F09_25460;product=thioredoxin-disulfide reductase;protein_id=TGC77973.1;transl_table=11 PYKB01001462.1 Genbank gene 2300 4066 . + . ID=gene-C9F09_25465;Name=C9F09_25465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25465 PYKB01001462.1 Protein Homology CDS 2300 4066 . + 0 ID=cds-TGC77974.1;Parent=gene-C9F09_25465;Dbxref=NCBI_GP:TGC77974.1;Name=TGC77974.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=C9F09_25465;product=thiol reductant ABC exporter subunit CydD;protein_id=TGC77974.1;transl_table=11 PYKB01001462.1 Genbank gene 4067 5788 . + . ID=gene-C9F09_25470;Name=C9F09_25470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25470 PYKB01001462.1 Protein Homology CDS 4067 5788 . + 0 ID=cds-TGC77975.1;Parent=gene-C9F09_25470;Dbxref=NCBI_GP:TGC77975.1;Name=TGC77975.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=C9F09_25470;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=TGC77975.1;transl_table=11 PYKB01001462.1 Genbank gene 5833 6438 . + . ID=gene-C9F09_25475;Name=C9F09_25475;end_range=6438,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25475;partial=true PYKB01001462.1 Protein Homology CDS 5833 6438 . + 0 ID=cds-TGC77976.1;Parent=gene-C9F09_25475;Dbxref=NCBI_GP:TGC77976.1;Name=TGC77976.1;end_range=6438,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455443.1;locus_tag=C9F09_25475;partial=true;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=TGC77976.1;transl_table=11 ##sequence-region PYKB01000160.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000160.1 Genbank region 1 244 . + . ID=PYKB01000160.1:1..244;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000160.1 Genbank gene 1 244 . - . ID=gene-C9F09_01785;Name=C9F09_01785;end_range=244,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01785;partial=true;start_range=.,1 PYKB01000160.1 Protein Homology CDS 1 244 . - 2 ID=cds-TGD04304.1;Parent=gene-C9F09_01785;Dbxref=NCBI_GP:TGD04304.1;Name=TGD04304.1;end_range=244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456735.1;locus_tag=C9F09_01785;partial=true;product=maleylacetoacetate isomerase;protein_id=TGD04304.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001555.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001555.1 Genbank region 1 244 . + . ID=PYKB01001555.1:1..244;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001555.1 Genbank pseudogene 42 244 . - . ID=gene-C9F09_27165;Name=C9F09_27165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_27165;pseudo=true PYKB01001555.1 Protein Homology CDS 42 244 . - 2 ID=cds-C9F09_27165;Parent=gene-C9F09_27165;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442766.1;locus_tag=C9F09_27165;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000695.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000695.1 Genbank region 1 244 . + . ID=PYKB01000695.1:1..244;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000695.1 Genbank gene 21 244 . + . ID=gene-C9F09_10590;Name=C9F09_10590;end_range=244,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10590;partial=true PYKB01000695.1 Protein Homology CDS 21 244 . + 0 ID=cds-TGC93765.1;Parent=gene-C9F09_10590;Dbxref=NCBI_GP:TGC93765.1;Name=TGC93765.1;Note=Acts as a negative controlling element%2C employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB;end_range=244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458539.1;locus_tag=C9F09_10590;partial=true;product=transcriptional regulator Zur;protein_id=TGC93765.1;transl_table=11 ##sequence-region PYKB01001111.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001111.1 Genbank region 1 244 . + . ID=PYKB01001111.1:1..244;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea ##sequence-region PYKB01000156.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000156.1 Genbank region 1 244 . + . ID=PYKB01000156.1:1..244;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea ##sequence-region PYKB01000098.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000098.1 Genbank region 1 244 . + . ID=PYKB01000098.1:1..244;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000098.1 Genbank gene 1 244 . - . ID=gene-C9F09_01135;Name=C9F09_01135;end_range=244,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01135;partial=true;start_range=.,1 PYKB01000098.1 Protein Homology CDS 1 244 . - 1 ID=cds-TGD05457.1;Parent=gene-C9F09_01135;Dbxref=NCBI_GP:TGD05457.1;Name=TGD05457.1;Note=with UgpEC is involved in the uptake of glycerol-3-phosphate;end_range=244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=C9F09_01135;partial=true;product=glycerol-3-phosphate transporter permease;protein_id=TGD05457.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001001.1 1 243 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001001.1 Genbank region 1 243 . + . ID=PYKB01001001.1:1..243;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001001.1 Genbank gene 1 243 . + . ID=gene-C9F09_16745;Name=C9F09_16745;end_range=243,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16745;partial=true;start_range=.,1 PYKB01001001.1 Protein Homology CDS 1 243 . + 0 ID=cds-TGC88187.1;Parent=gene-C9F09_16745;Dbxref=NCBI_GP:TGC88187.1;Name=TGC88187.1;end_range=243,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456671.1;locus_tag=C9F09_16745;partial=true;product=molecular chaperone;protein_id=TGC88187.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000295.1 1 243 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000295.1 Genbank region 1 243 . + . ID=PYKB01000295.1:1..243;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000295.1 Genbank gene 1 171 . - . ID=gene-C9F09_03365;Name=C9F09_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03365;partial=true;start_range=.,1 PYKB01000295.1 Protein Homology CDS 1 171 . - 0 ID=cds-TGD01537.1;Parent=gene-C9F09_03365;Dbxref=NCBI_GP:TGD01537.1;Name=TGD01537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454758.1;locus_tag=C9F09_03365;partial=true;product=prepilin peptidase-dependent pilin;protein_id=TGD01537.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000374.1 1 243 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000374.1 Genbank region 1 243 . + . ID=PYKB01000374.1:1..243;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000374.1 Genbank gene 1 243 . + . ID=gene-C9F09_04270;Name=C9F09_04270;end_range=243,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04270;partial=true;start_range=.,1 PYKB01000374.1 Protein Homology CDS 1 243 . + 0 ID=cds-TGD00052.1;Parent=gene-C9F09_04270;Dbxref=NCBI_GP:TGD00052.1;Name=TGD00052.1;Note=accepts sulfur from CsdA;end_range=243,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457382.1;locus_tag=C9F09_04270;partial=true;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=TGD00052.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000813.1 1 6422 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000813.1 Genbank region 1 6422 . + . ID=PYKB01000813.1:1..6422;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000813.1 Genbank gene 116 775 . - . ID=gene-C9F09_12665;Name=C9F09_12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12665 PYKB01000813.1 Protein Homology CDS 116 775 . - 0 ID=cds-TGC91986.1;Parent=gene-C9F09_12665;Dbxref=NCBI_GP:TGC91986.1;Name=TGC91986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457447.1;locus_tag=C9F09_12665;product=hemolysin III family protein;protein_id=TGC91986.1;transl_table=11 PYKB01000813.1 Genbank gene 939 1250 . - . ID=gene-C9F09_12670;Name=C9F09_12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12670 PYKB01000813.1 Protein Homology CDS 939 1250 . - 0 ID=cds-TGC91987.1;Parent=gene-C9F09_12670;Dbxref=NCBI_GP:TGC91987.1;Name=TGC91987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=C9F09_12670;product=ASCH domain-containing protein;protein_id=TGC91987.1;transl_table=11 PYKB01000813.1 Genbank gene 1408 2841 . + . ID=gene-C9F09_12675;Name=C9F09_12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12675 PYKB01000813.1 Protein Homology CDS 1408 2841 . + 0 ID=cds-TGC91988.1;Parent=gene-C9F09_12675;Dbxref=NCBI_GP:TGC91988.1;Name=TGC91988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=C9F09_12675;product=6-phospho-beta-glucosidase;protein_id=TGC91988.1;transl_table=11 PYKB01000813.1 Genbank gene 2889 3782 . - . ID=gene-C9F09_12680;Name=C9F09_12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12680 PYKB01000813.1 Protein Homology CDS 2889 3782 . - 0 ID=cds-TGC91989.1;Parent=gene-C9F09_12680;Dbxref=NCBI_GP:TGC91989.1;Name=TGC91989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=C9F09_12680;product=transporter;protein_id=TGC91989.1;transl_table=11 PYKB01000813.1 Genbank gene 3866 4012 . - . ID=gene-C9F09_12685;Name=C9F09_12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12685 PYKB01000813.1 Protein Homology CDS 3866 4012 . - 0 ID=cds-TGC91990.1;Parent=gene-C9F09_12685;Dbxref=NCBI_GP:TGC91990.1;Name=TGC91990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751796.1;locus_tag=C9F09_12685;product=immunoglobulin;protein_id=TGC91990.1;transl_table=11 PYKB01000813.1 Genbank pseudogene 4238 6343 . - . ID=gene-C9F09_12690;Name=C9F09_12690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12690;pseudo=true PYKB01000813.1 Protein Homology CDS 4238 6343 . - 0 ID=cds-C9F09_12690;Parent=gene-C9F09_12690;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=C9F09_12690;product=aminomethyl-transferring glycine dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKB01000264.1 1 242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000264.1 Genbank region 1 242 . + . ID=PYKB01000264.1:1..242;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000264.1 Genbank pseudogene 1 146 . - . ID=gene-C9F09_02990;Name=C9F09_02990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02990;pseudo=true PYKB01000264.1 Protein Homology CDS 1 146 . - 0 ID=cds-C9F09_02990;Parent=gene-C9F09_02990;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611823.1;locus_tag=C9F09_02990;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region PYKB01000167.1 1 242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000167.1 Genbank region 1 242 . + . ID=PYKB01000167.1:1..242;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000167.1 Genbank gene 1 242 . + . ID=gene-C9F09_01895;Name=C9F09_01895;end_range=242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01895;partial=true;start_range=.,1 PYKB01000167.1 Protein Homology CDS 1 242 . + 2 ID=cds-TGD04153.1;Parent=gene-C9F09_01895;Dbxref=NCBI_GP:TGD04153.1;Name=TGD04153.1;end_range=242,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456139.1;locus_tag=C9F09_01895;partial=true;product=DUF1722 domain-containing protein;protein_id=TGD04153.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000043.1 1 242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000043.1 Genbank region 1 242 . + . ID=PYKB01000043.1:1..242;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000043.1 Genbank gene 1 242 . - . ID=gene-C9F09_00500;Name=C9F09_00500;end_range=242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00500;partial=true;start_range=.,1 PYKB01000043.1 Protein Homology CDS 1 242 . - 2 ID=cds-TGD06575.1;Parent=gene-C9F09_00500;Dbxref=NCBI_GP:TGD06575.1;Name=TGD06575.1;end_range=242,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004591089.1;locus_tag=C9F09_00500;partial=true;product=hypothetical protein;protein_id=TGD06575.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000293.1 1 242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000293.1 Genbank region 1 242 . + . ID=PYKB01000293.1:1..242;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000293.1 Genbank gene 1 242 . + . ID=gene-C9F09_03355;Name=C9F09_03355;end_range=242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03355;partial=true;start_range=.,1 PYKB01000293.1 Protein Homology CDS 1 242 . + 0 ID=cds-TGD01539.1;Parent=gene-C9F09_03355;Dbxref=NCBI_GP:TGD01539.1;Name=TGD01539.1;Note=involved in the transport of aldohexuronates;end_range=242,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457529.1;locus_tag=C9F09_03355;partial=true;product=MFS transporter;protein_id=TGD01539.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000286.1 1 241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000286.1 Genbank region 1 241 . + . ID=PYKB01000286.1:1..241;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000286.1 Genbank gene 1 241 . + . ID=gene-C9F09_03265;Name=C9F09_03265;end_range=241,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03265;partial=true;start_range=.,1 PYKB01000286.1 Protein Homology CDS 1 241 . + 2 ID=cds-TGD01657.1;Parent=gene-C9F09_03265;Dbxref=NCBI_GP:TGD01657.1;Name=TGD01657.1;Note=sodium:branched-chain amino acid symporter;end_range=241,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454993.1;locus_tag=C9F09_03265;partial=true;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=TGD01657.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001066.1 1 241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001066.1 Genbank region 1 241 . + . ID=PYKB01001066.1:1..241;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001066.1 Genbank pseudogene 1 182 . + . ID=gene-C9F09_17850;Name=C9F09_17850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17850;pseudo=true PYKB01001066.1 Protein Homology CDS 1 182 . + 2 ID=cds-C9F09_17850;Parent=gene-C9F09_17850;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=C9F09_17850;product=DNA/RNA non-specific endonuclease;pseudo=true;transl_table=11 ##sequence-region PYKB01000105.1 1 241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000105.1 Genbank region 1 241 . + . ID=PYKB01000105.1:1..241;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000105.1 Genbank pseudogene 1 211 . + . ID=gene-C9F09_01205;Name=C9F09_01205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01205;pseudo=true PYKB01000105.1 Protein Homology CDS 1 211 . + 1 ID=cds-C9F09_01205;Parent=gene-C9F09_01205;Note=ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456169.1;locus_tag=C9F09_01205;product=vitamin B12-transporter ATPase;pseudo=true;transl_table=11 ##sequence-region PYKB01000216.1 1 241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000216.1 Genbank region 1 241 . + . ID=PYKB01000216.1:1..241;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000216.1 Genbank gene 1 241 . + . ID=gene-C9F09_02315;Name=C9F09_02315;end_range=241,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02315;partial=true;start_range=.,1 PYKB01000216.1 Protein Homology CDS 1 241 . + 2 ID=cds-TGD03438.1;Parent=gene-C9F09_02315;Dbxref=NCBI_GP:TGD03438.1;Name=TGD03438.1;end_range=241,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456811.1;locus_tag=C9F09_02315;partial=true;product=hypothetical protein;protein_id=TGD03438.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000583.1 1 6380 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000583.1 Genbank region 1 6380 . + . ID=PYKB01000583.1:1..6380;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000583.1 Genbank gene 1 266 . - . ID=gene-C9F09_08360;Name=C9F09_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08360;partial=true;start_range=.,1 PYKB01000583.1 Protein Homology CDS 1 266 . - 0 ID=cds-TGC95754.1;Parent=gene-C9F09_08360;Dbxref=NCBI_GP:TGC95754.1;Name=TGC95754.1;Note=catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458281.1;locus_tag=C9F09_08360;partial=true;product=trimethylamine-N-oxide reductase TorA;protein_id=TGC95754.1;start_range=.,1;transl_table=11 PYKB01000583.1 Genbank gene 419 1081 . + . ID=gene-C9F09_08365;Name=C9F09_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08365 PYKB01000583.1 Protein Homology CDS 419 1081 . + 0 ID=cds-TGC95755.1;Parent=gene-C9F09_08365;Dbxref=NCBI_GP:TGC95755.1;Name=TGC95755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458280.1;locus_tag=C9F09_08365;product=OmpA family lipoprotein;protein_id=TGC95755.1;transl_table=11 PYKB01000583.1 Genbank gene 1300 2274 . + . ID=gene-C9F09_08370;Name=C9F09_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08370 PYKB01000583.1 Protein Homology CDS 1300 2274 . + 0 ID=cds-TGC95756.1;Parent=gene-C9F09_08370;Dbxref=NCBI_GP:TGC95756.1;Name=TGC95756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458279.1;locus_tag=C9F09_08370;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=TGC95756.1;transl_table=11 PYKB01000583.1 Genbank pseudogene 2324 3034 . - . ID=gene-C9F09_08375;Name=C9F09_08375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08375;pseudo=true PYKB01000583.1 Protein Homology CDS 2324 3034 . - 0 ID=cds-C9F09_08375;Parent=gene-C9F09_08375;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458278.1;locus_tag=C9F09_08375;product=DUF3053 domain-containing protein;pseudo=true;transl_table=11 PYKB01000583.1 Genbank gene 3473 3763 . + . ID=gene-C9F09_08380;Name=C9F09_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08380 PYKB01000583.1 Protein Homology CDS 3473 3763 . + 0 ID=cds-TGC95757.1;Parent=gene-C9F09_08380;Dbxref=NCBI_GP:TGC95757.1;Name=TGC95757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=C9F09_08380;product=transcriptional regulator;protein_id=TGC95757.1;transl_table=11 PYKB01000583.1 Genbank gene 4051 4263 . + . ID=gene-C9F09_08385;Name=C9F09_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08385 PYKB01000583.1 Protein Homology CDS 4051 4263 . + 0 ID=cds-TGC95758.1;Parent=gene-C9F09_08385;Dbxref=NCBI_GP:TGC95758.1;Name=TGC95758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=C9F09_08385;product=cold-shock protein;protein_id=TGC95758.1;transl_table=11 PYKB01000583.1 Genbank gene 4447 4986 . + . ID=gene-C9F09_08390;Name=C9F09_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08390 PYKB01000583.1 Protein Homology CDS 4447 4986 . + 0 ID=cds-TGC95759.1;Parent=gene-C9F09_08390;Dbxref=NCBI_GP:TGC95759.1;Name=TGC95759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458275.1;locus_tag=C9F09_08390;product=hypothetical protein;protein_id=TGC95759.1;transl_table=11 PYKB01000583.1 Genbank pseudogene 5037 6347 . - . ID=gene-C9F09_08395;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=pseudogene;locus_tag=C9F09_08395;pseudo=true PYKB01000583.1 Protein Homology CDS 5037 6347 . - 0 ID=cds-C9F09_08395;Parent=gene-C9F09_08395;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=glyS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=C9F09_08395;product=glycine--tRNA ligase subunit beta;pseudo=true;transl_table=11 ##sequence-region PYKB01001386.1 1 240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001386.1 Genbank region 1 240 . + . ID=PYKB01001386.1:1..240;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001386.1 Genbank gene 1 240 . - . ID=gene-C9F09_23890;Name=C9F09_23890;end_range=240,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23890;partial=true;start_range=.,1 PYKB01001386.1 Protein Homology CDS 1 240 . - 1 ID=cds-TGC79766.1;Parent=gene-C9F09_23890;Dbxref=NCBI_GP:TGC79766.1;Name=TGC79766.1;Note=required for efficient enterobactin production;end_range=240,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455175.1;locus_tag=C9F09_23890;partial=true;product=thioesterase;protein_id=TGC79766.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000285.1 1 239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000285.1 Genbank region 1 239 . + . ID=PYKB01000285.1:1..239;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000285.1 Genbank gene 1 239 . + . ID=gene-C9F09_03260;Name=C9F09_03260;end_range=239,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03260;partial=true;start_range=.,1 PYKB01000285.1 Protein Homology CDS 1 239 . + 2 ID=cds-TGD01671.1;Parent=gene-C9F09_03260;Dbxref=NCBI_GP:TGD01671.1;Name=TGD01671.1;end_range=239,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456487.1;locus_tag=C9F09_03260;partial=true;product=chemotaxis protein CheA;protein_id=TGD01671.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000635.1 1 239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000635.1 Genbank region 1 239 . + . ID=PYKB01000635.1:1..239;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000635.1 Genbank gene 1 239 . + . ID=gene-C9F09_09460;Name=C9F09_09460;end_range=239,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09460;partial=true;start_range=.,1 PYKB01000635.1 Protein Homology CDS 1 239 . + 1 ID=cds-TGC94634.1;Parent=gene-C9F09_09460;Dbxref=NCBI_GP:TGC94634.1;Name=TGC94634.1;end_range=239,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044775.1;locus_tag=C9F09_09460;partial=true;product=hypothetical protein;protein_id=TGC94634.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001661.1 1 239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001661.1 Genbank region 1 239 . + . ID=PYKB01001661.1:1..239;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001661.1 Genbank gene 1 239 . + . ID=gene-C9F09_28935;Name=C9F09_28935;end_range=239,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28935;partial=true;start_range=.,1 PYKB01001661.1 Protein Homology CDS 1 239 . + 2 ID=cds-TGC73261.1;Parent=gene-C9F09_28935;Dbxref=NCBI_GP:TGC73261.1;Name=TGC73261.1;end_range=239,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454665.1;locus_tag=C9F09_28935;partial=true;product=hypothetical protein;protein_id=TGC73261.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000168.1 1 239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000168.1 Genbank region 1 239 . + . ID=PYKB01000168.1:1..239;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000168.1 Genbank gene 1 239 . + . ID=gene-C9F09_01900;Name=C9F09_01900;end_range=239,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01900;partial=true;start_range=.,1 PYKB01000168.1 Protein Homology CDS 1 239 . + 1 ID=cds-TGD04151.1;Parent=gene-C9F09_01900;Dbxref=NCBI_GP:TGD04151.1;Name=TGD04151.1;end_range=239,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458400.1;locus_tag=C9F09_01900;partial=true;product=hypothetical protein;protein_id=TGD04151.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000269.1 1 239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000269.1 Genbank region 1 239 . + . ID=PYKB01000269.1:1..239;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000269.1 Genbank gene 1 239 . - . ID=gene-C9F09_03055;Name=C9F09_03055;end_range=239,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03055;partial=true;start_range=.,1 PYKB01000269.1 Protein Homology CDS 1 239 . - 0 ID=cds-TGD01990.1;Parent=gene-C9F09_03055;Dbxref=NCBI_GP:TGD01990.1;Name=TGD01990.1;end_range=239,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457592.1;locus_tag=C9F09_03055;partial=true;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=TGD01990.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001435.1 1 238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001435.1 Genbank region 1 238 . + . ID=PYKB01001435.1:1..238;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001435.1 Genbank gene 1 238 . - . ID=gene-C9F09_24665;Name=C9F09_24665;end_range=238,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24665;partial=true;start_range=.,1 PYKB01001435.1 Protein Homology CDS 1 238 . - 1 ID=cds-TGC78659.1;Parent=gene-C9F09_24665;Dbxref=NCBI_GP:TGC78659.1;Name=TGC78659.1;end_range=238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456593.1;locus_tag=C9F09_24665;partial=true;product=diol dehydratase reactivase subunit alpha;protein_id=TGC78659.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000048.1 1 238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000048.1 Genbank region 1 238 . + . ID=PYKB01000048.1:1..238;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000048.1 Genbank gene 1 238 . + . ID=gene-C9F09_00550;Name=C9F09_00550;end_range=238,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00550;partial=true;start_range=.,1 PYKB01000048.1 Protein Homology CDS 1 238 . + 0 ID=cds-TGD06557.1;Parent=gene-C9F09_00550;Dbxref=NCBI_GP:TGD06557.1;Name=TGD06557.1;end_range=238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=C9F09_00550;partial=true;product=hypothetical protein;protein_id=TGD06557.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001103.1 1 238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001103.1 Genbank region 1 238 . + . ID=PYKB01001103.1:1..238;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001103.1 Genbank gene 1 238 . + . ID=gene-C9F09_18485;Name=C9F09_18485;end_range=238,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18485;partial=true;start_range=.,1 PYKB01001103.1 Protein Homology CDS 1 238 . + 1 ID=cds-TGC85902.1;Parent=gene-C9F09_18485;Dbxref=NCBI_GP:TGC85902.1;Name=TGC85902.1;end_range=238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=C9F09_18485;partial=true;product=hypothetical protein;protein_id=TGC85902.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000598.1 1 6367 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000598.1 Genbank region 1 6367 . + . ID=PYKB01000598.1:1..6367;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000598.1 Genbank gene 1 707 . - . ID=gene-C9F09_08720;Name=C9F09_08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08720;partial=true;start_range=.,1 PYKB01000598.1 Protein Homology CDS 1 707 . - 0 ID=cds-TGC95368.1;Parent=gene-C9F09_08720;Dbxref=NCBI_GP:TGC95368.1;Name=TGC95368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454867.1;locus_tag=C9F09_08720;partial=true;product=DNA polymerase III subunit epsilon;protein_id=TGC95368.1;start_range=.,1;transl_table=11 PYKB01000598.1 Genbank gene 771 1238 . + . ID=gene-C9F09_08725;Name=C9F09_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08725 PYKB01000598.1 Protein Homology CDS 771 1238 . + 0 ID=cds-TGC95369.1;Parent=gene-C9F09_08725;Dbxref=NCBI_GP:TGC95369.1;Name=TGC95369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454866.1;locus_tag=C9F09_08725;product=ribonuclease HI;protein_id=TGC95369.1;transl_table=11 PYKB01000598.1 Genbank gene 1235 1957 . - . ID=gene-C9F09_08730;Name=C9F09_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08730 PYKB01000598.1 Protein Homology CDS 1235 1957 . - 0 ID=cds-TGC95363.1;Parent=gene-C9F09_08730;Dbxref=NCBI_GP:TGC95363.1;Name=TGC95363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=C9F09_08730;product=SAM-dependent methyltransferase;protein_id=TGC95363.1;transl_table=11 PYKB01000598.1 Genbank gene 1992 2747 . + . ID=gene-C9F09_08735;Name=C9F09_08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08735 PYKB01000598.1 Protein Homology CDS 1992 2747 . + 0 ID=cds-TGC95364.1;Parent=gene-C9F09_08735;Dbxref=NCBI_GP:TGC95364.1;Name=TGC95364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454864.1;locus_tag=C9F09_08735;product=hydroxyacylglutathione hydrolase;protein_id=TGC95364.1;transl_table=11 PYKB01000598.1 Genbank gene 2819 4186 . + . ID=gene-C9F09_08740;Name=C9F09_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08740 PYKB01000598.1 Protein Homology CDS 2819 4186 . + 0 ID=cds-TGC95365.1;Parent=gene-C9F09_08740;Dbxref=NCBI_GP:TGC95365.1;Name=TGC95365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454863.1;locus_tag=C9F09_08740;product=murein transglycosylase D;protein_id=TGC95365.1;transl_table=11 PYKB01000598.1 Genbank gene 4242 5012 . - . ID=gene-C9F09_08745;Name=C9F09_08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08745 PYKB01000598.1 Protein Homology CDS 4242 5012 . - 0 ID=cds-TGC95366.1;Parent=gene-C9F09_08745;Dbxref=NCBI_GP:TGC95366.1;Name=TGC95366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454862.1;locus_tag=C9F09_08745;product=SAM-dependent methyltransferase;protein_id=TGC95366.1;transl_table=11 PYKB01000598.1 Genbank gene 5090 5890 . - . ID=gene-C9F09_08750;Name=C9F09_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08750 PYKB01000598.1 Protein Homology CDS 5090 5890 . - 0 ID=cds-TGC95367.1;Parent=gene-C9F09_08750;Dbxref=NCBI_GP:TGC95367.1;Name=TGC95367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308232.1;locus_tag=C9F09_08750;product=endonuclease/exonuclease/phosphatase family protein;protein_id=TGC95367.1;transl_table=11 PYKB01000598.1 Genbank gene 6022 6367 . - . ID=gene-C9F09_08755;Name=C9F09_08755;end_range=6367,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08755;partial=true PYKB01000598.1 Protein Homology CDS 6022 6367 . - 1 ID=cds-TGC95370.1;Parent=gene-C9F09_08755;Dbxref=NCBI_GP:TGC95370.1;Name=TGC95370.1;end_range=6367,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=C9F09_08755;partial=true;product=MFS sugar transporter;protein_id=TGC95370.1;transl_table=11 ##sequence-region PYKB01001434.1 1 238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001434.1 Genbank region 1 238 . + . ID=PYKB01001434.1:1..238;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001434.1 Genbank gene 83 238 . + . ID=gene-C9F09_24660;Name=C9F09_24660;end_range=238,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24660;partial=true PYKB01001434.1 Protein Homology CDS 83 238 . + 0 ID=cds-TGC78712.1;Parent=gene-C9F09_24660;Dbxref=NCBI_GP:TGC78712.1;Name=TGC78712.1;end_range=238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461623.1;locus_tag=C9F09_24660;partial=true;product=late control protein D;protein_id=TGC78712.1;transl_table=11 ##sequence-region PYKB01000591.1 1 238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000591.1 Genbank region 1 238 . + . ID=PYKB01000591.1:1..238;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000591.1 Genbank gene 1 238 . + . ID=gene-C9F09_08620;Name=C9F09_08620;end_range=238,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08620;partial=true;start_range=.,1 PYKB01000591.1 Protein Homology CDS 1 238 . + 2 ID=cds-TGC95544.1;Parent=gene-C9F09_08620;Dbxref=NCBI_GP:TGC95544.1;Name=TGC95544.1;end_range=238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456993.1;locus_tag=C9F09_08620;partial=true;product=hypothetical protein;protein_id=TGC95544.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000996.1 1 238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000996.1 Genbank region 1 238 . + . ID=PYKB01000996.1:1..238;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000996.1 Genbank gene 1 238 . - . ID=gene-C9F09_16640;Name=C9F09_16640;end_range=238,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16640;partial=true;start_range=.,1 PYKB01000996.1 Protein Homology CDS 1 238 . - 2 ID=cds-TGC88231.1;Parent=gene-C9F09_16640;Dbxref=NCBI_GP:TGC88231.1;Name=TGC88231.1;end_range=238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456995.1;locus_tag=C9F09_16640;partial=true;product=hypothetical protein;protein_id=TGC88231.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000069.1 1 238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000069.1 Genbank region 1 238 . + . ID=PYKB01000069.1:1..238;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000069.1 Genbank pseudogene 63 238 . - . ID=gene-C9F09_00835;Name=C9F09_00835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00835;pseudo=true PYKB01000069.1 Protein Homology CDS 63 238 . - 2 ID=cds-C9F09_00835;Parent=gene-C9F09_00835;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308726.1;locus_tag=C9F09_00835;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;pseudo=true;transl_table=11 ##sequence-region PYKB01000162.1 1 238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000162.1 Genbank region 1 238 . + . ID=PYKB01000162.1:1..238;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000162.1 Genbank gene 1 238 . + . ID=gene-C9F09_01820;Name=C9F09_01820;end_range=238,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01820;partial=true;start_range=.,1 PYKB01000162.1 Protein Homology CDS 1 238 . + 1 ID=cds-TGD04255.1;Parent=gene-C9F09_01820;Dbxref=NCBI_GP:TGD04255.1;Name=TGD04255.1;Note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters;end_range=238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456828.1;locus_tag=C9F09_01820;partial=true;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=TGD04255.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000015.1 1 237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000015.1 Genbank region 1 237 . + . ID=PYKB01000015.1:1..237;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000015.1 Genbank pseudogene 48 237 . - . ID=gene-C9F09_00165;Name=C9F09_00165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00165;pseudo=true PYKB01000015.1 Protein Homology CDS 48 237 . - 1 ID=cds-C9F09_00165;Parent=gene-C9F09_00165;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=C9F09_00165;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000130.1 1 237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000130.1 Genbank region 1 237 . + . ID=PYKB01000130.1:1..237;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000130.1 Genbank pseudogene 1 159 . + . ID=gene-C9F09_01480;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=pseudogene;locus_tag=C9F09_01480;pseudo=true PYKB01000130.1 Protein Homology CDS 1 159 . + 0 ID=cds-C9F09_01480;Parent=gene-C9F09_01480;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458417.1;locus_tag=C9F09_01480;product=shikimate kinase I;pseudo=true;transl_table=11 ##sequence-region PYKB01000273.1 1 237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000273.1 Genbank region 1 237 . + . ID=PYKB01000273.1:1..237;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000273.1 Genbank gene 1 171 . + . ID=gene-C9F09_03090;Name=C9F09_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03090;partial=true;start_range=.,1 PYKB01000273.1 Protein Homology CDS 1 171 . + 0 ID=cds-TGD01930.1;Parent=gene-C9F09_03090;Dbxref=NCBI_GP:TGD01930.1;Name=TGD01930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455604.1;locus_tag=C9F09_03090;partial=true;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=TGD01930.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000301.1 1 237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000301.1 Genbank region 1 237 . + . ID=PYKB01000301.1:1..237;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000301.1 Genbank gene 1 89 . - . ID=gene-C9F09_03405;Name=C9F09_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03405;partial=true;start_range=.,1 PYKB01000301.1 Protein Homology CDS 1 89 . - 0 ID=cds-TGD01465.1;Parent=gene-C9F09_03405;Dbxref=NCBI_GP:TGD01465.1;Name=TGD01465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454944.1;locus_tag=C9F09_03405;partial=true;product=response regulator;protein_id=TGD01465.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000080.1 1 236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000080.1 Genbank region 1 236 . + . ID=PYKB01000080.1:1..236;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000080.1 Genbank gene 1 236 . + . ID=gene-C9F09_00950;Name=C9F09_00950;end_range=236,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00950;partial=true;start_range=.,1 PYKB01000080.1 Protein Homology CDS 1 236 . + 1 ID=cds-TGD05897.1;Parent=gene-C9F09_00950;Dbxref=NCBI_GP:TGD05897.1;Name=TGD05897.1;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;end_range=236,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=C9F09_00950;partial=true;product=condensin subunit MukF;protein_id=TGD05897.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001673.1 1 6362 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001673.1 Genbank region 1 6362 . + . ID=PYKB01001673.1:1..6362;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001673.1 Genbank gene 1 400 . - . ID=gene-C9F09_29095;Name=C9F09_29095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29095;partial=true;start_range=.,1 PYKB01001673.1 Protein Homology CDS 1 400 . - 0 ID=cds-TGC73026.1;Parent=gene-C9F09_29095;Dbxref=NCBI_GP:TGC73026.1;Name=TGC73026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458080.1;locus_tag=C9F09_29095;partial=true;product=permease;protein_id=TGC73026.1;start_range=.,1;transl_table=11 PYKB01001673.1 Genbank pseudogene 630 1049 . - . ID=gene-C9F09_29100;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=pseudogene;locus_tag=C9F09_29100;pseudo=true PYKB01001673.1 Protein Homology CDS 630 1049 . - 0 ID=cds-C9F09_29100;Parent=gene-C9F09_29100;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane%3B internal stop;gbkey=CDS;gene=atpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=C9F09_29100;product=F0F1 ATP synthase subunit epsilon;pseudo=true;transl_table=11 PYKB01001673.1 Genbank gene 1070 2452 . - . ID=gene-C9F09_29105;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=C9F09_29105 PYKB01001673.1 Protein Homology CDS 1070 2452 . - 0 ID=cds-TGC73027.1;Parent=gene-C9F09_29105;Dbxref=NCBI_GP:TGC73027.1;Name=TGC73027.1;gbkey=CDS;gene=atpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=C9F09_29105;product=ATP synthase subunit beta;protein_id=TGC73027.1;transl_table=11 PYKB01001673.1 Genbank gene 2479 3342 . - . ID=gene-C9F09_29110;Name=C9F09_29110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29110 PYKB01001673.1 Protein Homology CDS 2479 3342 . - 0 ID=cds-TGC73028.1;Parent=gene-C9F09_29110;Dbxref=NCBI_GP:TGC73028.1;Name=TGC73028.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077994.1;locus_tag=C9F09_29110;product=ATP synthase subunit gamma;protein_id=TGC73028.1;transl_table=11 PYKB01001673.1 Genbank gene 3393 4934 . - . ID=gene-C9F09_29115;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=C9F09_29115 PYKB01001673.1 Protein Homology CDS 3393 4934 . - 0 ID=cds-TGC73029.1;Parent=gene-C9F09_29115;Dbxref=NCBI_GP:TGC73029.1;Name=TGC73029.1;gbkey=CDS;gene=atpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=C9F09_29115;product=ATP synthase subunit alpha;protein_id=TGC73029.1;transl_table=11 PYKB01001673.1 Genbank gene 4947 5480 . - . ID=gene-C9F09_29120;Name=C9F09_29120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29120 PYKB01001673.1 Protein Homology CDS 4947 5480 . - 0 ID=cds-TGC73030.1;Parent=gene-C9F09_29120;Dbxref=NCBI_GP:TGC73030.1;Name=TGC73030.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=C9F09_29120;product=ATP synthase subunit delta;protein_id=TGC73030.1;transl_table=11 PYKB01001673.1 Genbank gene 5495 5965 . - . ID=gene-C9F09_29125;Name=C9F09_29125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29125 PYKB01001673.1 Protein Homology CDS 5495 5965 . - 0 ID=cds-TGC73031.1;Parent=gene-C9F09_29125;Dbxref=NCBI_GP:TGC73031.1;Name=TGC73031.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=C9F09_29125;product=ATP synthase subunit B;protein_id=TGC73031.1;transl_table=11 PYKB01001673.1 Genbank gene 6025 6264 . - . ID=gene-C9F09_29130;Name=C9F09_29130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29130 PYKB01001673.1 Protein Homology CDS 6025 6264 . - 0 ID=cds-TGC73032.1;Parent=gene-C9F09_29130;Dbxref=NCBI_GP:TGC73032.1;Name=TGC73032.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312706.1;locus_tag=C9F09_29130;product=ATP synthase subunit C;protein_id=TGC73032.1;transl_table=11 ##sequence-region PYKB01000196.1 1 236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000196.1 Genbank region 1 236 . + . ID=PYKB01000196.1:1..236;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000196.1 Genbank gene 1 236 . - . ID=gene-C9F09_02175;Name=C9F09_02175;end_range=236,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02175;partial=true;start_range=.,1 PYKB01000196.1 Protein Homology CDS 1 236 . - 1 ID=cds-TGD03805.1;Parent=gene-C9F09_02175;Dbxref=NCBI_GP:TGD03805.1;Name=TGD03805.1;end_range=236,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454740.1;locus_tag=C9F09_02175;partial=true;product=hypothetical protein;protein_id=TGD03805.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001215.1 1 236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001215.1 Genbank region 1 236 . + . ID=PYKB01001215.1:1..236;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001215.1 Genbank gene 1 236 . + . ID=gene-C9F09_20685;Name=C9F09_20685;end_range=236,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20685;partial=true;start_range=.,1 PYKB01001215.1 Protein Homology CDS 1 236 . + 1 ID=cds-TGC83079.1;Parent=gene-C9F09_20685;Dbxref=NCBI_GP:TGC83079.1;Name=TGC83079.1;end_range=236,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=C9F09_20685;partial=true;product=hypothetical protein;protein_id=TGC83079.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000382.1 1 236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000382.1 Genbank region 1 236 . + . ID=PYKB01000382.1:1..236;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea ##sequence-region PYKB01000072.1 1 236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000072.1 Genbank region 1 236 . + . ID=PYKB01000072.1:1..236;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000072.1 Genbank pseudogene 1 231 . + . ID=gene-C9F09_00860;Name=C9F09_00860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00860;pseudo=true PYKB01000072.1 Protein Homology CDS 1 231 . + 0 ID=cds-C9F09_00860;Parent=gene-C9F09_00860;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456193.1;locus_tag=C9F09_00860;product=catalase HPII;pseudo=true;transl_table=11 ##sequence-region PYKB01000053.1 1 235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000053.1 Genbank region 1 235 . + . ID=PYKB01000053.1:1..235;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000053.1 Genbank gene 1 235 . + . ID=gene-C9F09_00585;Name=C9F09_00585;end_range=235,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00585;partial=true;start_range=.,1 PYKB01000053.1 Protein Homology CDS 1 235 . + 1 ID=cds-TGD06408.1;Parent=gene-C9F09_00585;Dbxref=NCBI_GP:TGD06408.1;Name=TGD06408.1;end_range=235,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457745.1;locus_tag=C9F09_00585;partial=true;product=hypothetical protein;protein_id=TGD06408.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000217.1 1 235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000217.1 Genbank region 1 235 . + . ID=PYKB01000217.1:1..235;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000217.1 Genbank gene 1 235 . - . ID=gene-C9F09_02320;Name=C9F09_02320;end_range=235,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02320;partial=true;start_range=.,1 PYKB01000217.1 Protein Homology CDS 1 235 . - 1 ID=cds-TGD03378.1;Parent=gene-C9F09_02320;Dbxref=NCBI_GP:TGD03378.1;Name=TGD03378.1;end_range=235,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456487.1;locus_tag=C9F09_02320;partial=true;product=chemotaxis protein CheA;protein_id=TGD03378.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000368.1 1 235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000368.1 Genbank region 1 235 . + . ID=PYKB01000368.1:1..235;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000368.1 Genbank gene 1 235 . - . ID=gene-C9F09_04175;Name=C9F09_04175;end_range=235,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04175;partial=true;start_range=.,1 PYKB01000368.1 Protein Homology CDS 1 235 . - 1 ID=cds-TGD00141.1;Parent=gene-C9F09_04175;Dbxref=NCBI_GP:TGD00141.1;Name=TGD00141.1;Note=GTP-activating protein/tyrosine phosphatase%3B facilitates bacterial survival in host cells;end_range=235,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=C9F09_04175;partial=true;product=pathogenicity island 1 effector protein StpP;protein_id=TGD00141.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001190.1 1 234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001190.1 Genbank region 1 234 . + . ID=PYKB01001190.1:1..234;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001190.1 Genbank pseudogene 1 234 . - . ID=gene-C9F09_20240;Name=dipZ;gbkey=Gene;gene=dipZ;gene_biotype=pseudogene;locus_tag=C9F09_20240;pseudo=true PYKB01001190.1 Protein Homology CDS 1 234 . - 2 ID=cds-C9F09_20240;Parent=gene-C9F09_20240;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;gene=dipZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=C9F09_20240;product=protein-disulfide reductase DsbD;pseudo=true;transl_table=11 ##sequence-region PYKB01001298.1 1 234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001298.1 Genbank region 1 234 . + . ID=PYKB01001298.1:1..234;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea ##sequence-region PYKB01001487.1 1 6358 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001487.1 Genbank region 1 6358 . + . ID=PYKB01001487.1:1..6358;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001487.1 Genbank pseudogene 64 738 . - . ID=gene-C9F09_25820;Name=C9F09_25820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_25820;pseudo=true PYKB01001487.1 Protein Homology CDS 64 738 . - 0 ID=cds-C9F09_25820;Parent=gene-C9F09_25820;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=C9F09_25820;product=transcriptional regulator;pseudo=true;transl_table=11 PYKB01001487.1 Genbank gene 963 1658 . - . ID=gene-C9F09_25825;Name=C9F09_25825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25825 PYKB01001487.1 Protein Homology CDS 963 1658 . - 0 ID=cds-TGC77559.1;Parent=gene-C9F09_25825;Dbxref=NCBI_GP:TGC77559.1;Name=TGC77559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=C9F09_25825;product=pirin family protein;protein_id=TGC77559.1;transl_table=11 PYKB01001487.1 Genbank gene 1782 2819 . - . ID=gene-C9F09_25830;Name=C9F09_25830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25830 PYKB01001487.1 Protein Homology CDS 1782 2819 . - 0 ID=cds-TGC77560.1;Parent=gene-C9F09_25830;Dbxref=NCBI_GP:TGC77560.1;Name=TGC77560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=C9F09_25830;product=oxidoreductase;protein_id=TGC77560.1;transl_table=11 PYKB01001487.1 Genbank gene 3291 3779 . + . ID=gene-C9F09_25835;Name=C9F09_25835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25835 PYKB01001487.1 Protein Homology CDS 3291 3779 . + 0 ID=cds-TGC77561.1;Parent=gene-C9F09_25835;Dbxref=NCBI_GP:TGC77561.1;Name=TGC77561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458373.1;locus_tag=C9F09_25835;product=N-acetyltransferase;protein_id=TGC77561.1;transl_table=11 PYKB01001487.1 Genbank gene 4044 5258 . + . ID=gene-C9F09_25840;Name=C9F09_25840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25840 PYKB01001487.1 Protein Homology CDS 4044 5258 . + 0 ID=cds-TGC77562.1;Parent=gene-C9F09_25840;Dbxref=NCBI_GP:TGC77562.1;Name=TGC77562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=C9F09_25840;product=ribokinase;protein_id=TGC77562.1;transl_table=11 PYKB01001487.1 Genbank gene 5274 6035 . + . ID=gene-C9F09_25845;Name=C9F09_25845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25845 PYKB01001487.1 Protein Homology CDS 5274 6035 . + 0 ID=cds-TGC77563.1;Parent=gene-C9F09_25845;Dbxref=NCBI_GP:TGC77563.1;Name=TGC77563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=C9F09_25845;product=cytoplasmic protein;protein_id=TGC77563.1;transl_table=11 PYKB01001487.1 Genbank gene 6089 6358 . + . ID=gene-C9F09_25850;Name=C9F09_25850;end_range=6358,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25850;partial=true PYKB01001487.1 Protein Homology CDS 6089 6358 . + 0 ID=cds-TGC77564.1;Parent=gene-C9F09_25850;Dbxref=NCBI_GP:TGC77564.1;Name=TGC77564.1;end_range=6358,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458370.1;locus_tag=C9F09_25850;partial=true;product=hypothetical protein;protein_id=TGC77564.1;transl_table=11 ##sequence-region PYKB01000086.1 1 233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000086.1 Genbank region 1 233 . + . ID=PYKB01000086.1:1..233;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000086.1 Genbank gene 1 233 . + . ID=gene-C9F09_01035;Name=C9F09_01035;end_range=233,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01035;partial=true;start_range=.,1 PYKB01000086.1 Protein Homology CDS 1 233 . + 2 ID=cds-TGD05716.1;Parent=gene-C9F09_01035;Dbxref=NCBI_GP:TGD05716.1;Name=TGD05716.1;Note=laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification;end_range=233,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454781.1;locus_tag=C9F09_01035;partial=true;product=multicopper oxidase;protein_id=TGD05716.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001132.1 1 233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001132.1 Genbank region 1 233 . + . ID=PYKB01001132.1:1..233;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001132.1 Genbank pseudogene 69 221 . + . ID=gene-C9F09_19090;Name=potC;gbkey=Gene;gene=potC;gene_biotype=pseudogene;locus_tag=C9F09_19090;pseudo=true PYKB01001132.1 Protein Homology CDS 69 221 . + 0 ID=cds-C9F09_19090;Parent=gene-C9F09_19090;Note=can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotC is a membrane component%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=potC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455715.1;locus_tag=C9F09_19090;product=spermidine/putrescine ABC transporter permease PotC;pseudo=true;transl_table=11 ##sequence-region PYKB01001032.1 1 233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001032.1 Genbank region 1 233 . + . ID=PYKB01001032.1:1..233;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001032.1 Genbank gene 1 233 . + . ID=gene-C9F09_17245;Name=C9F09_17245;end_range=233,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17245;partial=true;start_range=.,1 PYKB01001032.1 Protein Homology CDS 1 233 . + 1 ID=cds-TGC87557.1;Parent=gene-C9F09_17245;Dbxref=NCBI_GP:TGC87557.1;Name=TGC87557.1;end_range=233,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044774.1;locus_tag=C9F09_17245;partial=true;product=hypothetical protein;protein_id=TGC87557.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001454.1 1 233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001454.1 Genbank region 1 233 . + . ID=PYKB01001454.1:1..233;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea ##sequence-region PYKB01000612.1 1 232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000612.1 Genbank region 1 232 . + . ID=PYKB01000612.1:1..232;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000612.1 Genbank gene 41 232 . - . ID=gene-C9F09_09040;Name=C9F09_09040;end_range=232,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09040;partial=true PYKB01000612.1 Protein Homology CDS 41 232 . - 0 ID=cds-TGC95122.1;Parent=gene-C9F09_09040;Dbxref=NCBI_GP:TGC95122.1;Name=TGC95122.1;end_range=232,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006911310.1;locus_tag=C9F09_09040;partial=true;product=hypothetical protein;protein_id=TGC95122.1;transl_table=11 ##sequence-region PYKB01000101.1 1 232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000101.1 Genbank region 1 232 . + . ID=PYKB01000101.1:1..232;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000101.1 Genbank gene 1 232 . + . ID=gene-C9F09_01160;Name=C9F09_01160;end_range=232,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01160;partial=true;start_range=.,1 PYKB01000101.1 Protein Homology CDS 1 232 . + 0 ID=cds-TGD05450.1;Parent=gene-C9F09_01160;Dbxref=NCBI_GP:TGD05450.1;Name=TGD05450.1;end_range=232,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457711.1;locus_tag=C9F09_01160;partial=true;product=hypothetical protein;protein_id=TGD05450.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000153.1 1 232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000153.1 Genbank region 1 232 . + . ID=PYKB01000153.1:1..232;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000153.1 Genbank gene 1 232 . - . ID=gene-C9F09_01720;Name=C9F09_01720;end_range=232,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01720;partial=true;start_range=.,1 PYKB01000153.1 Protein Homology CDS 1 232 . - 2 ID=cds-TGD04482.1;Parent=gene-C9F09_01720;Dbxref=NCBI_GP:TGD04482.1;Name=TGD04482.1;end_range=232,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455571.1;locus_tag=C9F09_01720;partial=true;product=TIGR01666 family membrane protein;protein_id=TGD04482.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001407.1 1 232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001407.1 Genbank region 1 232 . + . ID=PYKB01001407.1:1..232;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001407.1 Genbank gene 84 232 . - . ID=gene-C9F09_24170;Name=C9F09_24170;end_range=232,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24170;partial=true PYKB01001407.1 Protein Homology CDS 84 232 . - 2 ID=cds-TGC79305.1;Parent=gene-C9F09_24170;Dbxref=NCBI_GP:TGC79305.1;Name=TGC79305.1;Note=with FlhA%2C FlhB%2C FliP%2C FliQ and FliR is one of the membrane components of the flagellar export apparatus;end_range=232,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456539.1;locus_tag=C9F09_24170;partial=true;product=flagellar biosynthesis protein FliO;protein_id=TGC79305.1;transl_table=11 ##sequence-region PYKB01000643.1 1 231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000643.1 Genbank region 1 231 . + . ID=PYKB01000643.1:1..231;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000643.1 Genbank gene 1 58 . - . ID=gene-C9F09_09670;Name=C9F09_09670;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_09670 PYKB01000643.1 tRNAscan-SE tRNA 1 58 . - . ID=rna-C9F09_09670;Parent=gene-C9F09_09670;anticodon=(pos:complement(30..32));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_09670;product=tRNA-Val PYKB01000643.1 tRNAscan-SE exon 1 58 . - . ID=exon-C9F09_09670-1;Parent=rna-C9F09_09670;anticodon=(pos:complement(30..32));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_09670;product=tRNA-Val ##sequence-region PYKB01000357.1 1 231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000357.1 Genbank region 1 231 . + . ID=PYKB01000357.1:1..231;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000357.1 Genbank gene 1 231 . - . ID=gene-C9F09_04035;Name=clpX;end_range=231,.;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=C9F09_04035;partial=true;start_range=.,1 PYKB01000357.1 Protein Homology CDS 1 231 . - 0 ID=cds-TGD00363.1;Parent=gene-C9F09_04035;Dbxref=NCBI_GP:TGD00363.1;Name=TGD00363.1;Note=binds and unfolds substrates as part of the ClpXP protease;end_range=231,.;gbkey=CDS;gene=clpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=C9F09_04035;partial=true;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=TGD00363.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000556.1 1 6351 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000556.1 Genbank region 1 6351 . + . ID=PYKB01000556.1:1..6351;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000556.1 Genbank gene 1 81 . - . ID=gene-C9F09_07670;Name=C9F09_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07670;partial=true;start_range=.,1 PYKB01000556.1 Protein Homology CDS 1 81 . - 0 ID=cds-TGC96356.1;Parent=gene-C9F09_07670;Dbxref=NCBI_GP:TGC96356.1;Name=TGC96356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454650.1;locus_tag=C9F09_07670;partial=true;product=sodium:proton antiporter;protein_id=TGC96356.1;start_range=.,1;transl_table=11 PYKB01000556.1 Genbank pseudogene 244 471 . - . ID=gene-C9F09_07675;Name=C9F09_07675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07675;pseudo=true PYKB01000556.1 Protein Homology CDS 244 471 . - 0 ID=cds-C9F09_07675;Parent=gene-C9F09_07675;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454649.1;locus_tag=C9F09_07675;product=arylsulfatase;pseudo=true;transl_table=11 PYKB01000556.1 Genbank gene 393 650 . - . ID=gene-C9F09_07680;Name=C9F09_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07680 PYKB01000556.1 Protein Homology CDS 393 650 . - 0 ID=cds-TGC96357.1;Parent=gene-C9F09_07680;Dbxref=NCBI_GP:TGC96357.1;Name=TGC96357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528979.1;locus_tag=C9F09_07680;product=aryl sulfotransferase;protein_id=TGC96357.1;transl_table=11 PYKB01000556.1 Genbank gene 769 2022 . - . ID=gene-C9F09_07685;Name=C9F09_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07685 PYKB01000556.1 Protein Homology CDS 769 2022 . - 0 ID=cds-TGC96358.1;Parent=gene-C9F09_07685;Dbxref=NCBI_GP:TGC96358.1;Name=TGC96358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457886.1;locus_tag=C9F09_07685;product=cytoplasmic protein;protein_id=TGC96358.1;transl_table=11 PYKB01000556.1 Genbank gene 2040 3236 . - . ID=gene-C9F09_07690;Name=C9F09_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07690 PYKB01000556.1 Protein Homology CDS 2040 3236 . - 0 ID=cds-TGC96359.1;Parent=gene-C9F09_07690;Dbxref=NCBI_GP:TGC96359.1;Name=TGC96359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519625.1;locus_tag=C9F09_07690;product=anaerobic sulfatase maturase;protein_id=TGC96359.1;transl_table=11 PYKB01000556.1 Genbank gene 3340 4833 . - . ID=gene-C9F09_07695;Name=C9F09_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07695 PYKB01000556.1 Protein Homology CDS 3340 4833 . - 0 ID=cds-TGC96360.1;Parent=gene-C9F09_07695;Dbxref=NCBI_GP:TGC96360.1;Name=TGC96360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=C9F09_07695;product=arylsulfatase;protein_id=TGC96360.1;transl_table=11 PYKB01000556.1 Genbank gene 4854 5618 . - . ID=gene-C9F09_07700;Name=C9F09_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07700 PYKB01000556.1 Protein Homology CDS 4854 5618 . - 0 ID=cds-TGC96361.1;Parent=gene-C9F09_07700;Dbxref=NCBI_GP:TGC96361.1;Name=TGC96361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052612.1;locus_tag=C9F09_07700;product=hypothetical protein;protein_id=TGC96361.1;transl_table=11 PYKB01000556.1 Genbank pseudogene 6074 6267 . + . ID=gene-C9F09_07705;Name=C9F09_07705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07705;pseudo=true PYKB01000556.1 Protein Homology CDS 6074 6267 . + 0 ID=cds-C9F09_07705;Parent=gene-C9F09_07705;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542932.1;locus_tag=C9F09_07705;product=5'-nucleotidase;pseudo=true;transl_table=11 ##sequence-region PYKB01000166.1 1 231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000166.1 Genbank region 1 231 . + . ID=PYKB01000166.1:1..231;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000166.1 Genbank gene 1 219 . - . ID=gene-C9F09_01890;Name=C9F09_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01890;partial=true;start_range=.,1 PYKB01000166.1 Protein Homology CDS 1 219 . - 0 ID=cds-TGD04155.1;Parent=gene-C9F09_01890;Dbxref=NCBI_GP:TGD04155.1;Name=TGD04155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458439.1;locus_tag=C9F09_01890;partial=true;product=monooxygenase;protein_id=TGD04155.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001398.1 1 231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001398.1 Genbank region 1 231 . + . ID=PYKB01001398.1:1..231;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001398.1 Genbank gene 1 231 . - . ID=gene-C9F09_24000;Name=C9F09_24000;end_range=231,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24000;partial=true;start_range=.,1 PYKB01001398.1 Protein Homology CDS 1 231 . - 0 ID=cds-TGC79531.1;Parent=gene-C9F09_24000;Dbxref=NCBI_GP:TGC79531.1;Name=TGC79531.1;end_range=231,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455559.1;locus_tag=C9F09_24000;partial=true;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=TGC79531.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001044.1 1 229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001044.1 Genbank region 1 229 . + . ID=PYKB01001044.1:1..229;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001044.1 Genbank pseudogene 9 229 . + . ID=gene-C9F09_17540;Name=C9F09_17540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17540;pseudo=true PYKB01001044.1 Protein Homology CDS 9 229 . + 0 ID=cds-C9F09_17540;Parent=gene-C9F09_17540;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280241.1;locus_tag=C9F09_17540;product=DUF91 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001495.1 1 227 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001495.1 Genbank region 1 227 . + . ID=PYKB01001495.1:1..227;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001495.1 Genbank gene 1 227 . - . ID=gene-C9F09_25975;Name=C9F09_25975;end_range=227,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F09_25975;partial=true;start_range=.,1 PYKB01001495.1 Genbank rRNA 1 227 . - . ID=rna-C9F09_25975;Parent=gene-C9F09_25975;end_range=227,.;gbkey=rRNA;locus_tag=C9F09_25975;partial=true;product=23S ribosomal RNA;start_range=.,1 PYKB01001495.1 Genbank exon 1 227 . - . ID=exon-C9F09_25975-1;Parent=rna-C9F09_25975;end_range=227,.;gbkey=rRNA;locus_tag=C9F09_25975;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region PYKB01000097.1 1 201 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000097.1 Genbank region 1 201 . + . ID=PYKB01000097.1:1..201;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000097.1 Genbank gene 1 77 . - . ID=gene-C9F09_01130;Name=C9F09_01130;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_01130 PYKB01000097.1 tRNAscan-SE tRNA 1 77 . - . ID=rna-C9F09_01130;Parent=gene-C9F09_01130;anticodon=(pos:complement(41..43));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_01130;product=tRNA-Asp PYKB01000097.1 tRNAscan-SE exon 1 77 . - . ID=exon-C9F09_01130-1;Parent=rna-C9F09_01130;anticodon=(pos:complement(41..43));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_01130;product=tRNA-Asp ##sequence-region PYKB01000844.1 1 6339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000844.1 Genbank region 1 6339 . + . ID=PYKB01000844.1:1..6339;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000844.1 Genbank pseudogene 125 2389 . - . ID=gene-C9F09_13425;Name=C9F09_13425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13425;pseudo=true PYKB01000844.1 Protein Homology CDS 125 2389 . - 0 ID=cds-C9F09_13425;Parent=gene-C9F09_13425;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=C9F09_13425;product=glutamate synthase large subunit;pseudo=true;transl_table=11 PYKB01000844.1 Genbank gene 2312 2527 . + . ID=gene-C9F09_13430;Name=C9F09_13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13430 PYKB01000844.1 Protein Homology CDS 2312 2527 . + 0 ID=cds-TGC91386.1;Parent=gene-C9F09_13430;Dbxref=NCBI_GP:TGC91386.1;Name=TGC91386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001546060.1;locus_tag=C9F09_13430;product=hypothetical protein;protein_id=TGC91386.1;transl_table=11 PYKB01000844.1 Genbank gene 3061 3990 . + . ID=gene-C9F09_13435;Name=C9F09_13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13435 PYKB01000844.1 Protein Homology CDS 3061 3990 . + 0 ID=cds-TGC91387.1;Parent=gene-C9F09_13435;Dbxref=NCBI_GP:TGC91387.1;Name=TGC91387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457708.1;locus_tag=C9F09_13435;product=TIGR01212 family radical SAM protein;protein_id=TGC91387.1;transl_table=11 PYKB01000844.1 Genbank gene 4084 6339 . + . ID=gene-C9F09_13440;Name=C9F09_13440;end_range=6339,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13440;partial=true PYKB01000844.1 Protein Homology CDS 4084 6339 . + 0 ID=cds-TGC91388.1;Parent=gene-C9F09_13440;Dbxref=NCBI_GP:TGC91388.1;Name=TGC91388.1;end_range=6339,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=C9F09_13440;partial=true;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=TGC91388.1;transl_table=11 ##sequence-region PYKB01000873.1 1 6307 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000873.1 Genbank region 1 6307 . + . ID=PYKB01000873.1:1..6307;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000873.1 Genbank gene 1 261 . + . ID=gene-C9F09_14180;Name=C9F09_14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14180;partial=true;start_range=.,1 PYKB01000873.1 Protein Homology CDS 1 261 . + 0 ID=cds-TGC90752.1;Parent=gene-C9F09_14180;Dbxref=NCBI_GP:TGC90752.1;Name=TGC90752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463076.1;locus_tag=C9F09_14180;partial=true;product=phage tail tape measure protein;protein_id=TGC90752.1;start_range=.,1;transl_table=11 PYKB01000873.1 Genbank gene 261 1214 . + . ID=gene-C9F09_14185;Name=C9F09_14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14185 PYKB01000873.1 Protein Homology CDS 261 1214 . + 0 ID=cds-TGC90753.1;Parent=gene-C9F09_14185;Dbxref=NCBI_GP:TGC90753.1;Name=TGC90753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463075.1;locus_tag=C9F09_14185;product=chemotaxis protein;protein_id=TGC90753.1;transl_table=11 PYKB01000873.1 Genbank gene 1214 1423 . + . ID=gene-C9F09_14190;Name=C9F09_14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14190 PYKB01000873.1 Protein Homology CDS 1214 1423 . + 0 ID=cds-TGC90754.1;Parent=gene-C9F09_14190;Dbxref=NCBI_GP:TGC90754.1;Name=TGC90754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463074.1;locus_tag=C9F09_14190;product=hypothetical protein;protein_id=TGC90754.1;transl_table=11 PYKB01000873.1 Genbank gene 1411 2454 . + . ID=gene-C9F09_14195;Name=C9F09_14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14195 PYKB01000873.1 Protein Homology CDS 1411 2454 . + 0 ID=cds-TGC90755.1;Parent=gene-C9F09_14195;Dbxref=NCBI_GP:TGC90755.1;Name=TGC90755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463073.1;locus_tag=C9F09_14195;product=phage protein D;protein_id=TGC90755.1;transl_table=11 PYKB01000873.1 Genbank gene 2464 3186 . + . ID=gene-C9F09_14200;Name=C9F09_14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14200 PYKB01000873.1 Protein Homology CDS 2464 3186 . + 0 ID=cds-TGC90756.1;Parent=gene-C9F09_14200;Dbxref=NCBI_GP:TGC90756.1;Name=TGC90756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463072.1;locus_tag=C9F09_14200;product=phage baseplate assembly protein V;protein_id=TGC90756.1;transl_table=11 PYKB01000873.1 Genbank gene 3195 3434 . + . ID=gene-C9F09_14205;Name=C9F09_14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14205 PYKB01000873.1 Protein Homology CDS 3195 3434 . + 0 ID=cds-TGC90757.1;Parent=gene-C9F09_14205;Dbxref=NCBI_GP:TGC90757.1;Name=TGC90757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519528.1;locus_tag=C9F09_14205;product=hypothetical protein;protein_id=TGC90757.1;transl_table=11 PYKB01000873.1 Genbank gene 3510 3872 . + . ID=gene-C9F09_14210;Name=C9F09_14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14210 PYKB01000873.1 Protein Homology CDS 3510 3872 . + 0 ID=cds-TGC90758.1;Parent=gene-C9F09_14210;Dbxref=NCBI_GP:TGC90758.1;Name=TGC90758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463071.1;locus_tag=C9F09_14210;product=translocase;protein_id=TGC90758.1;transl_table=11 PYKB01000873.1 Genbank gene 3869 4798 . + . ID=gene-C9F09_14215;Name=C9F09_14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14215 PYKB01000873.1 Protein Homology CDS 3869 4798 . + 0 ID=cds-TGC90759.1;Parent=gene-C9F09_14215;Dbxref=NCBI_GP:TGC90759.1;Name=TGC90759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463070.1;locus_tag=C9F09_14215;product=glycosyltransferase;protein_id=TGC90759.1;transl_table=11 PYKB01000873.1 Genbank gene 4798 6307 . + . ID=gene-C9F09_14220;Name=C9F09_14220;end_range=6307,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14220;partial=true PYKB01000873.1 Protein Homology CDS 4798 6307 . + 0 ID=cds-TGC90760.1;Parent=gene-C9F09_14220;Dbxref=NCBI_GP:TGC90760.1;Name=TGC90760.1;end_range=6307,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463069.1;locus_tag=C9F09_14220;partial=true;product=hypothetical protein;protein_id=TGC90760.1;transl_table=11 ##sequence-region PYKB01000811.1 1 6303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000811.1 Genbank region 1 6303 . + . ID=PYKB01000811.1:1..6303;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000811.1 Genbank gene 1 1105 . - . ID=gene-C9F09_12615;Name=C9F09_12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12615;partial=true;start_range=.,1 PYKB01000811.1 Protein Homology CDS 1 1105 . - 0 ID=cds-TGC92010.1;Parent=gene-C9F09_12615;Dbxref=NCBI_GP:TGC92010.1;Name=TGC92010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=C9F09_12615;partial=true;product=MFS transporter;protein_id=TGC92010.1;start_range=.,1;transl_table=11 PYKB01000811.1 Genbank gene 1369 2124 . - . ID=gene-C9F09_12620;Name=C9F09_12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12620 PYKB01000811.1 Protein Homology CDS 1369 2124 . - 0 ID=cds-TGC92011.1;Parent=gene-C9F09_12620;Dbxref=NCBI_GP:TGC92011.1;Name=TGC92011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457987.1;locus_tag=C9F09_12620;product=CDP-diacylglycerol diphosphatase;protein_id=TGC92011.1;transl_table=11 PYKB01000811.1 Genbank gene 2225 3214 . - . ID=gene-C9F09_12625;Name=C9F09_12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12625 PYKB01000811.1 Protein Homology CDS 2225 3214 . - 0 ID=cds-TGC92012.1;Parent=gene-C9F09_12625;Dbxref=NCBI_GP:TGC92012.1;Name=TGC92012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=C9F09_12625;product=sulfate-binding protein;protein_id=TGC92012.1;transl_table=11 PYKB01000811.1 Genbank gene 3418 4380 . - . ID=gene-C9F09_12630;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=C9F09_12630 PYKB01000811.1 Protein Homology CDS 3418 4380 . - 0 ID=cds-TGC92013.1;Parent=gene-C9F09_12630;Dbxref=NCBI_GP:TGC92013.1;Name=TGC92013.1;gbkey=CDS;gene=pfkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457989.1;locus_tag=C9F09_12630;product=6-phosphofructokinase;protein_id=TGC92013.1;transl_table=11 PYKB01000811.1 Genbank gene 4565 5467 . - . ID=gene-C9F09_12635;Name=C9F09_12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12635 PYKB01000811.1 Protein Homology CDS 4565 5467 . - 0 ID=cds-TGC92014.1;Parent=gene-C9F09_12635;Dbxref=NCBI_GP:TGC92014.1;Name=TGC92014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=C9F09_12635;product=cation-efflux pump FieF;protein_id=TGC92014.1;transl_table=11 PYKB01000811.1 Genbank gene 5616 6116 . - . ID=gene-C9F09_12640;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=C9F09_12640 PYKB01000811.1 Protein Homology CDS 5616 6116 . - 0 ID=cds-TGC92015.1;Parent=gene-C9F09_12640;Dbxref=NCBI_GP:TGC92015.1;Name=TGC92015.1;Note=repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=C9F09_12640;product=stress adaptor protein CpxP;protein_id=TGC92015.1;transl_table=11 ##sequence-region PYKB01000648.1 1 13451 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000648.1 Genbank region 1 13451 . + . ID=PYKB01000648.1:1..13451;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000648.1 Genbank gene 1 554 . + . ID=gene-C9F09_09710;Name=C9F09_09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09710;partial=true;start_range=.,1 PYKB01000648.1 Protein Homology CDS 1 554 . + 2 ID=cds-TGC94407.1;Parent=gene-C9F09_09710;Dbxref=NCBI_GP:TGC94407.1;Name=TGC94407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=C9F09_09710;partial=true;product=ribosome biogenesis GTPase Der;protein_id=TGC94407.1;start_range=.,1;transl_table=11 PYKB01000648.1 Genbank gene 643 864 . + . ID=gene-C9F09_09715;Name=C9F09_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09715 PYKB01000648.1 Protein Homology CDS 643 864 . + 0 ID=cds-TGC94408.1;Parent=gene-C9F09_09715;Dbxref=NCBI_GP:TGC94408.1;Name=TGC94408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=C9F09_09715;product=hypothetical protein;protein_id=TGC94408.1;transl_table=11 PYKB01000648.1 Genbank gene 1210 3402 . + . ID=gene-C9F09_09720;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=C9F09_09720 PYKB01000648.1 Protein Homology CDS 1210 3402 . + 0 ID=cds-TGC94409.1;Parent=gene-C9F09_09720;Dbxref=NCBI_GP:TGC94409.1;Name=TGC94409.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=C9F09_09720;product=intimin-like inverse autotransporter SinH;protein_id=TGC94409.1;transl_table=11 PYKB01000648.1 Genbank gene 3460 4425 . + . ID=gene-C9F09_09725;Name=C9F09_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09725 PYKB01000648.1 Protein Homology CDS 3460 4425 . + 0 ID=cds-TGC94410.1;Parent=gene-C9F09_09725;Dbxref=NCBI_GP:TGC94410.1;Name=TGC94410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457049.1;locus_tag=C9F09_09725;product=hypothetical protein;protein_id=TGC94410.1;transl_table=11 PYKB01000648.1 Genbank gene 4563 8387 . + . ID=gene-C9F09_09730;Name=C9F09_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09730 PYKB01000648.1 Protein Homology CDS 4563 8387 . + 0 ID=cds-TGC94411.1;Parent=gene-C9F09_09730;Dbxref=NCBI_GP:TGC94411.1;Name=TGC94411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466001.1;locus_tag=C9F09_09730;product=hypothetical protein;protein_id=TGC94411.1;transl_table=11 PYKB01000648.1 Genbank pseudogene 8451 10145 . + . ID=gene-C9F09_09735;Name=C9F09_09735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_09735;pseudo=true PYKB01000648.1 Protein Homology CDS 8451 10145 . + 0 ID=cds-C9F09_09735;Parent=gene-C9F09_09735;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466000.1;locus_tag=C9F09_09735;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000648.1 Genbank gene 10304 10531 . + . ID=gene-C9F09_09740;Name=C9F09_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09740 PYKB01000648.1 Protein Homology CDS 10304 10531 . + 0 ID=cds-TGC94412.1;Parent=gene-C9F09_09740;Dbxref=NCBI_GP:TGC94412.1;Name=TGC94412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837122.1;locus_tag=C9F09_09740;product=hypothetical protein;protein_id=TGC94412.1;transl_table=11 PYKB01000648.1 Genbank gene 11214 13451 . + . ID=gene-C9F09_09745;Name=C9F09_09745;end_range=13451,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09745;partial=true PYKB01000648.1 Protein Homology CDS 11214 13451 . + 0 ID=cds-TGC94413.1;Parent=gene-C9F09_09745;Dbxref=NCBI_GP:TGC94413.1;Name=TGC94413.1;end_range=13451,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461448.1;locus_tag=C9F09_09745;partial=true;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=TGC94413.1;transl_table=11 ##sequence-region PYKB01000585.1 1 6289 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000585.1 Genbank region 1 6289 . + . ID=PYKB01000585.1:1..6289;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000585.1 Genbank pseudogene 72 845 . - . ID=gene-C9F09_08415;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=pseudogene;gene_synonym=aarF,yigQ,yigR;locus_tag=C9F09_08415;pseudo=true PYKB01000585.1 Protein Homology CDS 72 845 . - 0 ID=cds-C9F09_08415;Parent=gene-C9F09_08415;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=ubiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457779.1;locus_tag=C9F09_08415;product=ubiquinone biosynthesis regulatory protein kinase UbiB;pseudo=true;transl_table=11 PYKB01000585.1 Genbank gene 842 1447 . - . ID=gene-C9F09_08420;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=C9F09_08420 PYKB01000585.1 Protein Homology CDS 842 1447 . - 0 ID=cds-TGC95707.1;Parent=gene-C9F09_08420;Dbxref=NCBI_GP:TGC95707.1;Name=TGC95707.1;gbkey=CDS;gene=ubiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=C9F09_08420;product=ubiquinone biosynthesis protein UbiJ;protein_id=TGC95707.1;transl_table=11 PYKB01000585.1 Genbank gene 1457 2212 . - . ID=gene-C9F09_08425;Name=C9F09_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08425 PYKB01000585.1 Protein Homology CDS 1457 2212 . - 0 ID=cds-TGC95708.1;Parent=gene-C9F09_08425;Dbxref=NCBI_GP:TGC95708.1;Name=TGC95708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457781.1;locus_tag=C9F09_08425;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=TGC95708.1;transl_table=11 PYKB01000585.1 Genbank gene 2308 3738 . - . ID=gene-C9F09_08430;Name=C9F09_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08430 PYKB01000585.1 Protein Homology CDS 2308 3738 . - 0 ID=cds-TGC95709.1;Parent=gene-C9F09_08430;Dbxref=NCBI_GP:TGC95709.1;Name=TGC95709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457782.1;locus_tag=C9F09_08430;product=DNA recombination protein RmuC;protein_id=TGC95709.1;transl_table=11 PYKB01000585.1 Genbank gene 3878 4639 . - . ID=gene-C9F09_08435;Name=C9F09_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08435 PYKB01000585.1 Protein Homology CDS 3878 4639 . - 0 ID=cds-TGC95710.1;Parent=gene-C9F09_08435;Dbxref=NCBI_GP:TGC95710.1;Name=TGC95710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457783.1;locus_tag=C9F09_08435;product=uridine phosphorylase;protein_id=TGC95710.1;transl_table=11 PYKB01000585.1 Genbank gene 4898 5710 . + . ID=gene-C9F09_08440;Name=C9F09_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08440 PYKB01000585.1 Protein Homology CDS 4898 5710 . + 0 ID=cds-TGC95711.1;Parent=gene-C9F09_08440;Dbxref=NCBI_GP:TGC95711.1;Name=TGC95711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=C9F09_08440;product=carboxymethylenebutenolidase;protein_id=TGC95711.1;transl_table=11 PYKB01000585.1 Genbank gene 5790 6289 . - . ID=gene-C9F09_08445;Name=C9F09_08445;end_range=6289,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08445;partial=true PYKB01000585.1 Protein Homology CDS 5790 6289 . - 2 ID=cds-TGC95712.1;Parent=gene-C9F09_08445;Dbxref=NCBI_GP:TGC95712.1;Name=TGC95712.1;end_range=6289,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=C9F09_08445;partial=true;product=anaerobic sulfatase maturase;protein_id=TGC95712.1;transl_table=11 ##sequence-region PYKB01000872.1 1 6286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000872.1 Genbank region 1 6286 . + . ID=PYKB01000872.1:1..6286;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000872.1 Genbank gene 244 1068 . + . ID=gene-C9F09_14150;Name=C9F09_14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14150 PYKB01000872.1 Protein Homology CDS 244 1068 . + 0 ID=cds-TGC90768.1;Parent=gene-C9F09_14150;Dbxref=NCBI_GP:TGC90768.1;Name=TGC90768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463284.1;locus_tag=C9F09_14150;product=AraC family transcriptional regulator;protein_id=TGC90768.1;transl_table=11 PYKB01000872.1 Genbank gene 1328 2248 . + . ID=gene-C9F09_14155;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=C9F09_14155 PYKB01000872.1 Protein Homology CDS 1328 2248 . + 0 ID=cds-TGC90769.1;Parent=gene-C9F09_14155;Dbxref=NCBI_GP:TGC90769.1;Name=TGC90769.1;gbkey=CDS;gene=iolE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463285.3;locus_tag=C9F09_14155;product=myo-inosose-2 dehydratase;protein_id=TGC90769.1;transl_table=11 PYKB01000872.1 Genbank gene 2267 3277 . + . ID=gene-C9F09_14160;Name=C9F09_14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14160 PYKB01000872.1 Protein Homology CDS 2267 3277 . + 0 ID=cds-TGC90770.1;Parent=gene-C9F09_14160;Dbxref=NCBI_GP:TGC90770.1;Name=TGC90770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463286.1;locus_tag=C9F09_14160;product=inositol 2-dehydrogenase;protein_id=TGC90770.1;transl_table=11 PYKB01000872.1 Genbank gene 3375 4718 . + . ID=gene-C9F09_14165;Name=C9F09_14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14165 PYKB01000872.1 Protein Homology CDS 3375 4718 . + 0 ID=cds-TGC90771.1;Parent=gene-C9F09_14165;Dbxref=NCBI_GP:TGC90771.1;Name=TGC90771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463287.1;locus_tag=C9F09_14165;product=lysosomal glucosyl ceramidase;protein_id=TGC90771.1;transl_table=11 PYKB01000872.1 Genbank gene 4719 5552 . + . ID=gene-C9F09_14170;Name=C9F09_14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14170 PYKB01000872.1 Protein Homology CDS 4719 5552 . + 0 ID=cds-TGC90772.1;Parent=gene-C9F09_14170;Dbxref=NCBI_GP:TGC90772.1;Name=TGC90772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463288.1;locus_tag=C9F09_14170;product=sugar phosphate isomerase/epimerase;protein_id=TGC90772.1;transl_table=11 PYKB01000872.1 Genbank gene 5549 6286 . - . ID=gene-C9F09_14175;Name=C9F09_14175;end_range=6286,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14175;partial=true PYKB01000872.1 Protein Homology CDS 5549 6286 . - 0 ID=cds-TGC90773.1;Parent=gene-C9F09_14175;Dbxref=NCBI_GP:TGC90773.1;Name=TGC90773.1;end_range=6286,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463289.1;locus_tag=C9F09_14175;partial=true;product=arabinose transporter;protein_id=TGC90773.1;transl_table=11 ##sequence-region PYKB01001102.1 1 6281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001102.1 Genbank region 1 6281 . + . ID=PYKB01001102.1:1..6281;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001102.1 Genbank pseudogene 85 1473 . - . ID=gene-C9F09_18455;Name=C9F09_18455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18455;pseudo=true PYKB01001102.1 Protein Homology CDS 85 1473 . - 0 ID=cds-C9F09_18455;Parent=gene-C9F09_18455;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457337.1;locus_tag=C9F09_18455;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;pseudo=true;transl_table=11 PYKB01001102.1 Genbank gene 1798 1968 . - . ID=gene-C9F09_18460;Name=C9F09_18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18460 PYKB01001102.1 Protein Homology CDS 1798 1968 . - 0 ID=cds-TGC85910.1;Parent=gene-C9F09_18460;Dbxref=NCBI_GP:TGC85910.1;Name=TGC85910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219186.1;locus_tag=C9F09_18460;product=6-pyruvoyl tetrahydrobiopterin synthase;protein_id=TGC85910.1;transl_table=11 PYKB01001102.1 Genbank gene 1897 2259 . + . ID=gene-C9F09_18465;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=C9F09_18465 PYKB01001102.1 Protein Homology CDS 1897 2259 . + 0 ID=cds-TGC85907.1;Parent=gene-C9F09_18465;Dbxref=NCBI_GP:TGC85907.1;Name=TGC85907.1;gbkey=CDS;gene=queD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434567.1;locus_tag=C9F09_18465;product=6-carboxytetrahydropterin synthase QueD;protein_id=TGC85907.1;transl_table=11 PYKB01001102.1 Genbank gene 2346 3143 . - . ID=gene-C9F09_18470;Name=C9F09_18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18470 PYKB01001102.1 Protein Homology CDS 2346 3143 . - 0 ID=cds-TGC85908.1;Parent=gene-C9F09_18470;Dbxref=NCBI_GP:TGC85908.1;Name=TGC85908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=C9F09_18470;product=MBL fold metallo-hydrolase;protein_id=TGC85908.1;transl_table=11 PYKB01001102.1 Genbank direct_repeat 3241 3940 . + . ID=id-PYKB01001102.1:3241..3940;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2,COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=3302..3330;rpt_unit_seq=cggtttatccccgctggcgcggggaacac PYKB01001102.1 Genbank gene 4237 4908 . - . ID=gene-C9F09_18475;Name=C9F09_18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18475 PYKB01001102.1 Protein Homology CDS 4237 4908 . - 0 ID=cds-TGC85909.1;Parent=gene-C9F09_18475;Dbxref=NCBI_GP:TGC85909.1;Name=TGC85909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=C9F09_18475;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=TGC85909.1;transl_table=11 PYKB01001102.1 Genbank gene 5044 6281 . - . ID=gene-C9F09_18480;Name=C9F09_18480;end_range=6281,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18480;partial=true PYKB01001102.1 Protein Homology CDS 5044 6281 . - 2 ID=cds-TGC85911.1;Parent=gene-C9F09_18480;Dbxref=NCBI_GP:TGC85911.1;Name=TGC85911.1;end_range=6281,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=C9F09_18480;partial=true;product=phosphopyruvate hydratase;protein_id=TGC85911.1;transl_table=11 ##sequence-region PYKB01001691.1 1 6278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001691.1 Genbank region 1 6278 . + . ID=PYKB01001691.1:1..6278;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001691.1 Genbank gene 1 500 . - . ID=gene-C9F09_29505;Name=C9F09_29505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29505;partial=true;start_range=.,1 PYKB01001691.1 Protein Homology CDS 1 500 . - 0 ID=cds-TGC72385.1;Parent=gene-C9F09_29505;Dbxref=NCBI_GP:TGC72385.1;Name=TGC72385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=C9F09_29505;partial=true;product=C4-dicarboxylate ABC transporter;protein_id=TGC72385.1;start_range=.,1;transl_table=11 PYKB01001691.1 Genbank gene 554 1399 . - . ID=gene-C9F09_29510;Name=C9F09_29510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29510 PYKB01001691.1 Protein Homology CDS 554 1399 . - 0 ID=cds-TGC72386.1;Parent=gene-C9F09_29510;Dbxref=NCBI_GP:TGC72386.1;Name=TGC72386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=C9F09_29510;product=fructoselysine 6-kinase;protein_id=TGC72386.1;transl_table=11 PYKB01001691.1 Genbank gene 1463 2440 . - . ID=gene-C9F09_29515;Name=C9F09_29515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29515 PYKB01001691.1 Protein Homology CDS 1463 2440 . - 0 ID=cds-TGC72387.1;Parent=gene-C9F09_29515;Dbxref=NCBI_GP:TGC72387.1;Name=TGC72387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=C9F09_29515;product=phosphosugar isomerase;protein_id=TGC72387.1;transl_table=11 PYKB01001691.1 Genbank gene 2616 3335 . - . ID=gene-C9F09_29520;Name=C9F09_29520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29520 PYKB01001691.1 Protein Homology CDS 2616 3335 . - 0 ID=cds-TGC72388.1;Parent=gene-C9F09_29520;Dbxref=NCBI_GP:TGC72388.1;Name=TGC72388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=C9F09_29520;product=GntR family transcriptional regulator;protein_id=TGC72388.1;transl_table=11 PYKB01001691.1 Genbank gene 3662 5311 . + . ID=gene-C9F09_29525;Name=treF;gbkey=Gene;gene=treF;gene_biotype=protein_coding;locus_tag=C9F09_29525 PYKB01001691.1 Protein Homology CDS 3662 5311 . + 0 ID=cds-TGC72389.1;Parent=gene-C9F09_29525;Dbxref=NCBI_GP:TGC72389.1;Name=TGC72389.1;Note=cytoplasmic%3B catalyzes the hydrolysis of trehalose to glucose;gbkey=CDS;gene=treF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=C9F09_29525;product=trehalase;protein_id=TGC72389.1;transl_table=11 PYKB01001691.1 Genbank gene 5324 6278 . - . ID=gene-C9F09_29530;Name=C9F09_29530;end_range=6278,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29530;partial=true PYKB01001691.1 Protein Homology CDS 5324 6278 . - 1 ID=cds-TGC72390.1;Parent=gene-C9F09_29530;Dbxref=NCBI_GP:TGC72390.1;Name=TGC72390.1;end_range=6278,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=C9F09_29530;partial=true;product=hypothetical protein;protein_id=TGC72390.1;transl_table=11 ##sequence-region PYKB01001094.1 1 6273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001094.1 Genbank region 1 6273 . + . ID=PYKB01001094.1:1..6273;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001094.1 Genbank gene 1 1018 . + . ID=gene-C9F09_18335;Name=C9F09_18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18335;partial=true;start_range=.,1 PYKB01001094.1 Protein Homology CDS 1 1018 . + 1 ID=cds-TGC86178.1;Parent=gene-C9F09_18335;Dbxref=NCBI_GP:TGC86178.1;Name=TGC86178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458523.1;locus_tag=C9F09_18335;partial=true;product=YjbH domain-containing protein;protein_id=TGC86178.1;start_range=.,1;transl_table=11 PYKB01001094.1 Genbank gene 1161 1571 . + . ID=gene-C9F09_18340;Name=C9F09_18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18340 PYKB01001094.1 Protein Homology CDS 1161 1571 . + 0 ID=cds-TGC86179.1;Parent=gene-C9F09_18340;Dbxref=NCBI_GP:TGC86179.1;Name=TGC86179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458524.1;locus_tag=C9F09_18340;product=phosphate-starvation-inducible protein PsiE;protein_id=TGC86179.1;transl_table=11 PYKB01001094.1 Genbank gene 1737 2627 . - . ID=gene-C9F09_18345;Name=C9F09_18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18345 PYKB01001094.1 Protein Homology CDS 1737 2627 . - 0 ID=cds-TGC86180.1;Parent=gene-C9F09_18345;Dbxref=NCBI_GP:TGC86180.1;Name=TGC86180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458525.1;locus_tag=C9F09_18345;product=maltose ABC transporter permease;protein_id=TGC86180.1;transl_table=11 PYKB01001094.1 Genbank gene 2642 4186 . - . ID=gene-C9F09_18350;Name=C9F09_18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18350 PYKB01001094.1 Protein Homology CDS 2642 4186 . - 0 ID=cds-TGC86181.1;Parent=gene-C9F09_18350;Dbxref=NCBI_GP:TGC86181.1;Name=TGC86181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=C9F09_18350;product=maltose ABC transporter permease MalF;protein_id=TGC86181.1;transl_table=11 PYKB01001094.1 Genbank pseudogene 4318 5508 . - . ID=gene-C9F09_18355;Name=C9F09_18355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18355;pseudo=true PYKB01001094.1 Protein Homology CDS 4318 5508 . - 0 ID=cds-C9F09_18355;Parent=gene-C9F09_18355;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458527.1;locus_tag=C9F09_18355;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;pseudo=true;transl_table=11 PYKB01001094.1 Genbank gene 5870 6273 . + . ID=gene-C9F09_18360;Name=C9F09_18360;end_range=6273,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18360;partial=true PYKB01001094.1 Protein Homology CDS 5870 6273 . + 0 ID=cds-TGC86182.1;Parent=gene-C9F09_18360;Dbxref=NCBI_GP:TGC86182.1;Name=TGC86182.1;Note=with malEFG is involved in import of maltose/maltodextrin;end_range=6273,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=C9F09_18360;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGC86182.1;transl_table=11 ##sequence-region PYKB01001041.1 1 6242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001041.1 Genbank region 1 6242 . + . ID=PYKB01001041.1:1..6242;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001041.1 Genbank gene 1 693 . - . ID=gene-C9F09_17455;Name=C9F09_17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17455;partial=true;start_range=.,1 PYKB01001041.1 Protein Homology CDS 1 693 . - 0 ID=cds-TGC87338.1;Parent=gene-C9F09_17455;Dbxref=NCBI_GP:TGC87338.1;Name=TGC87338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131976.1;locus_tag=C9F09_17455;partial=true;product=hypothetical protein;protein_id=TGC87338.1;start_range=.,1;transl_table=11 PYKB01001041.1 Genbank gene 686 1837 . - . ID=gene-C9F09_17460;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=C9F09_17460 PYKB01001041.1 Protein Homology CDS 686 1837 . - 0 ID=cds-TGC87339.1;Parent=gene-C9F09_17460;Dbxref=NCBI_GP:TGC87339.1;Name=TGC87339.1;Note=membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export;gbkey=CDS;gene=flhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=C9F09_17460;product=flagellar biosynthesis protein FlhB;protein_id=TGC87339.1;transl_table=11 PYKB01001041.1 Genbank gene 2031 2675 . - . ID=gene-C9F09_17465;Name=C9F09_17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17465 PYKB01001041.1 Protein Homology CDS 2031 2675 . - 0 ID=cds-TGC87340.1;Parent=gene-C9F09_17465;Dbxref=NCBI_GP:TGC87340.1;Name=TGC87340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=C9F09_17465;product=protein phosphatase CheZ;protein_id=TGC87340.1;transl_table=11 PYKB01001041.1 Genbank gene 2686 3075 . - . ID=gene-C9F09_17470;Name=C9F09_17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17470 PYKB01001041.1 Protein Homology CDS 2686 3075 . - 0 ID=cds-TGC87341.1;Parent=gene-C9F09_17470;Dbxref=NCBI_GP:TGC87341.1;Name=TGC87341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127682.1;locus_tag=C9F09_17470;product=two-component system response regulator;protein_id=TGC87341.1;transl_table=11 PYKB01001041.1 Genbank gene 3093 4142 . - . ID=gene-C9F09_17475;Name=C9F09_17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17475 PYKB01001041.1 Protein Homology CDS 3093 4142 . - 0 ID=cds-TGC87342.1;Parent=gene-C9F09_17475;Dbxref=NCBI_GP:TGC87342.1;Name=TGC87342.1;Note=regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=C9F09_17475;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=TGC87342.1;transl_table=11 PYKB01001041.1 Genbank gene 4139 5005 . - . ID=gene-C9F09_17480;Name=C9F09_17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17480 PYKB01001041.1 Protein Homology CDS 4139 5005 . - 0 ID=cds-TGC87343.1;Parent=gene-C9F09_17480;Dbxref=NCBI_GP:TGC87343.1;Name=TGC87343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=C9F09_17480;product=chemotaxis protein methyltransferase;protein_id=TGC87343.1;transl_table=11 PYKB01001041.1 Genbank gene 5166 6242 . - . ID=gene-C9F09_17485;Name=C9F09_17485;end_range=6242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17485;partial=true PYKB01001041.1 Protein Homology CDS 5166 6242 . - 0 ID=cds-TGC87344.1;Parent=gene-C9F09_17485;Dbxref=NCBI_GP:TGC87344.1;Name=TGC87344.1;Note=serine sensor receptor;end_range=6242,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456485.1;locus_tag=C9F09_17485;partial=true;product=methyl-accepting chemotaxis protein II;protein_id=TGC87344.1;transl_table=11 ##sequence-region PYKB01001718.1 1 6228 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001718.1 Genbank region 1 6228 . + . ID=PYKB01001718.1:1..6228;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001718.1 Genbank gene 195 641 . + . ID=gene-C9F09_30090;Name=C9F09_30090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30090 PYKB01001718.1 Protein Homology CDS 195 641 . + 0 ID=cds-TGC71443.1;Parent=gene-C9F09_30090;Dbxref=NCBI_GP:TGC71443.1;Name=TGC71443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456229.1;locus_tag=C9F09_30090;product=DUF441 domain-containing protein;protein_id=TGC71443.1;transl_table=11 PYKB01001718.1 Genbank gene 621 1415 . - . ID=gene-C9F09_30095;Name=C9F09_30095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30095 PYKB01001718.1 Protein Homology CDS 621 1415 . - 0 ID=cds-TGC71444.1;Parent=gene-C9F09_30095;Dbxref=NCBI_GP:TGC71444.1;Name=TGC71444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=C9F09_30095;product=AraC family transcriptional regulator;protein_id=TGC71444.1;transl_table=11 PYKB01001718.1 Genbank gene 1516 2700 . + . ID=gene-C9F09_30100;Name=C9F09_30100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30100 PYKB01001718.1 Protein Homology CDS 1516 2700 . + 0 ID=cds-TGC71445.1;Parent=gene-C9F09_30100;Dbxref=NCBI_GP:TGC71445.1;Name=TGC71445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=C9F09_30100;product=cyanate MFS transporter;protein_id=TGC71445.1;transl_table=11 PYKB01001718.1 Genbank gene 2821 3168 . + . ID=gene-C9F09_30105;Name=C9F09_30105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30105 PYKB01001718.1 Protein Homology CDS 2821 3168 . + 0 ID=cds-TGC71446.1;Parent=gene-C9F09_30105;Dbxref=NCBI_GP:TGC71446.1;Name=TGC71446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=C9F09_30105;product=DUF488 domain-containing protein;protein_id=TGC71446.1;transl_table=11 PYKB01001718.1 Genbank gene 3154 3465 . - . ID=gene-C9F09_30110;Name=C9F09_30110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30110 PYKB01001718.1 Protein Homology CDS 3154 3465 . - 0 ID=cds-TGC71447.1;Parent=gene-C9F09_30110;Dbxref=NCBI_GP:TGC71447.1;Name=TGC71447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=C9F09_30110;product=hypothetical protein;protein_id=TGC71447.1;transl_table=11 PYKB01001718.1 Genbank gene 3534 3785 . - . ID=gene-C9F09_30115;Name=C9F09_30115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30115 PYKB01001718.1 Protein Homology CDS 3534 3785 . - 0 ID=cds-TGC71448.1;Parent=gene-C9F09_30115;Dbxref=NCBI_GP:TGC71448.1;Name=TGC71448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=C9F09_30115;product=DUF333 domain-containing protein;protein_id=TGC71448.1;transl_table=11 PYKB01001718.1 Genbank gene 3981 4085 . + . ID=gene-C9F09_30120;Name=C9F09_30120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30120 PYKB01001718.1 Protein Homology CDS 3981 4085 . + 0 ID=cds-TGC71449.1;Parent=gene-C9F09_30120;Dbxref=NCBI_GP:TGC71449.1;Name=TGC71449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964813.1;locus_tag=C9F09_30120;product=hypothetical protein;protein_id=TGC71449.1;transl_table=11 PYKB01001718.1 Genbank gene 4218 4466 . - . ID=gene-C9F09_30125;Name=C9F09_30125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30125 PYKB01001718.1 Protein Homology CDS 4218 4466 . - 0 ID=cds-TGC71450.1;Parent=gene-C9F09_30125;Dbxref=NCBI_GP:TGC71450.1;Name=TGC71450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456236.1;locus_tag=C9F09_30125;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=TGC71450.1;transl_table=11 PYKB01001718.1 Genbank gene 4474 4659 . - . ID=gene-C9F09_30130;Name=C9F09_30130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30130 PYKB01001718.1 Protein Homology CDS 4474 4659 . - 0 ID=cds-TGC71451.1;Parent=gene-C9F09_30130;Dbxref=NCBI_GP:TGC71451.1;Name=TGC71451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012512826.1;locus_tag=C9F09_30130;product=hypothetical protein;protein_id=TGC71451.1;transl_table=11 PYKB01001718.1 Genbank gene 4780 5421 . - . ID=gene-C9F09_30135;Name=C9F09_30135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30135 PYKB01001718.1 Protein Homology CDS 4780 5421 . - 0 ID=cds-TGC71452.1;Parent=gene-C9F09_30135;Dbxref=NCBI_GP:TGC71452.1;Name=TGC71452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=C9F09_30135;product=hypothetical protein;protein_id=TGC71452.1;transl_table=11 PYKB01001718.1 Genbank gene 5651 5833 . - . ID=gene-C9F09_30140;Name=C9F09_30140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30140 PYKB01001718.1 Protein Homology CDS 5651 5833 . - 0 ID=cds-TGC71453.1;Parent=gene-C9F09_30140;Dbxref=NCBI_GP:TGC71453.1;Name=TGC71453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=C9F09_30140;product=DUF1869 domain-containing protein;protein_id=TGC71453.1;transl_table=11 PYKB01001718.1 Genbank gene 5836 6171 . - . ID=gene-C9F09_30145;Name=C9F09_30145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30145 PYKB01001718.1 Protein Homology CDS 5836 6171 . - 0 ID=cds-TGC71454.1;Parent=gene-C9F09_30145;Dbxref=NCBI_GP:TGC71454.1;Name=TGC71454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456240.1;locus_tag=C9F09_30145;product=hypothetical protein;protein_id=TGC71454.1;transl_table=11 ##sequence-region PYKB01001639.1 1 6208 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001639.1 Genbank region 1 6208 . + . ID=PYKB01001639.1:1..6208;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001639.1 Genbank gene 1 368 . - . ID=gene-C9F09_28625;Name=C9F09_28625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28625;partial=true;start_range=.,1 PYKB01001639.1 Protein Homology CDS 1 368 . - 0 ID=cds-TGC73838.1;Parent=gene-C9F09_28625;Dbxref=NCBI_GP:TGC73838.1;Name=TGC73838.1;Note=3' incision activity%3B acts with UvrC;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456203.1;locus_tag=C9F09_28625;partial=true;product=endonuclease;protein_id=TGC73838.1;start_range=.,1;transl_table=11 PYKB01001639.1 Genbank gene 462 1289 . - . ID=gene-C9F09_28630;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=C9F09_28630 PYKB01001639.1 Protein Homology CDS 462 1289 . - 0 ID=cds-TGC73831.1;Parent=gene-C9F09_28630;Dbxref=NCBI_GP:TGC73831.1;Name=TGC73831.1;Note=catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;gene=nadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=C9F09_28630;product=NAD(+) synthetase;protein_id=TGC73831.1;transl_table=11 PYKB01001639.1 Genbank gene 1508 1849 . + . ID=gene-C9F09_28635;Name=C9F09_28635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28635 PYKB01001639.1 Protein Homology CDS 1508 1849 . + 0 ID=cds-TGC73832.1;Parent=gene-C9F09_28635;Dbxref=NCBI_GP:TGC73832.1;Name=TGC73832.1;Note=osmotically-inducible lipoprotein E%3B activator of ntr-like gene protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456201.1;locus_tag=C9F09_28635;product=osmotically-inducible lipoprotein OsmE;protein_id=TGC73832.1;transl_table=11 PYKB01001639.1 Genbank pseudogene 2034 2166 . - . ID=gene-C9F09_28640;Name=C9F09_28640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28640;pseudo=true PYKB01001639.1 Protein Homology CDS 2034 2166 . - 0 ID=cds-C9F09_28640;Parent=gene-C9F09_28640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322861.1;locus_tag=C9F09_28640;product=acetyltransferase;pseudo=true;transl_table=11 PYKB01001639.1 Genbank gene 2150 2470 . + . ID=gene-C9F09_28645;Name=C9F09_28645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28645 PYKB01001639.1 Protein Homology CDS 2150 2470 . + 0 ID=cds-TGC73833.1;Parent=gene-C9F09_28645;Dbxref=NCBI_GP:TGC73833.1;Name=TGC73833.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456200.1;locus_tag=C9F09_28645;product=PTS sugar transporter subunit IIB;protein_id=TGC73833.1;transl_table=11 PYKB01001639.1 Genbank gene 2553 3911 . + . ID=gene-C9F09_28650;Name=C9F09_28650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28650 PYKB01001639.1 Protein Homology CDS 2553 3911 . + 0 ID=cds-TGC73834.1;Parent=gene-C9F09_28650;Dbxref=NCBI_GP:TGC73834.1;Name=TGC73834.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=C9F09_28650;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=TGC73834.1;transl_table=11 PYKB01001639.1 Genbank gene 3962 4309 . + . ID=gene-C9F09_28655;Name=C9F09_28655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28655 PYKB01001639.1 Protein Homology CDS 3962 4309 . + 0 ID=cds-TGC73835.1;Parent=gene-C9F09_28655;Dbxref=NCBI_GP:TGC73835.1;Name=TGC73835.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=C9F09_28655;product=PTS N N'-diacetylchitobiose transporter subunit IIA;protein_id=TGC73835.1;transl_table=11 PYKB01001639.1 Genbank gene 4320 5162 . + . ID=gene-C9F09_28660;Name=C9F09_28660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28660 PYKB01001639.1 Protein Homology CDS 4320 5162 . + 0 ID=cds-TGC73836.1;Parent=gene-C9F09_28660;Dbxref=NCBI_GP:TGC73836.1;Name=TGC73836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456197.1;locus_tag=C9F09_28660;product=transcriptional regulator ChbR;protein_id=TGC73836.1;transl_table=11 PYKB01001639.1 Genbank gene 5287 6208 . + . ID=gene-C9F09_28665;Name=C9F09_28665;end_range=6208,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28665;partial=true PYKB01001639.1 Protein Homology CDS 5287 6208 . + 0 ID=cds-TGC73837.1;Parent=gene-C9F09_28665;Dbxref=NCBI_GP:TGC73837.1;Name=TGC73837.1;Note=catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate;end_range=6208,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=C9F09_28665;partial=true;product=6-phospho-beta-glucosidase;protein_id=TGC73837.1;transl_table=11 ##sequence-region PYKB01000441.1 1 6189 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000441.1 Genbank region 1 6189 . + . ID=PYKB01000441.1:1..6189;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000441.1 Genbank gene 1 234 . + . ID=gene-C9F09_05410;Name=C9F09_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05410;partial=true;start_range=.,1 PYKB01000441.1 Protein Homology CDS 1 234 . + 0 ID=cds-TGC98790.1;Parent=gene-C9F09_05410;Dbxref=NCBI_GP:TGC98790.1;Name=TGC98790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456612.1;locus_tag=C9F09_05410;partial=true;product=hypothetical protein;protein_id=TGC98790.1;start_range=.,1;transl_table=11 PYKB01000441.1 Genbank gene 231 995 . + . ID=gene-C9F09_05415;Name=C9F09_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05415 PYKB01000441.1 Protein Homology CDS 231 995 . + 0 ID=cds-TGC98791.1;Parent=gene-C9F09_05415;Dbxref=NCBI_GP:TGC98791.1;Name=TGC98791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456611.1;locus_tag=C9F09_05415;product=thiosulfate reductase cytochrome B subunit;protein_id=TGC98791.1;transl_table=11 PYKB01000441.1 Genbank gene 1119 2291 . + . ID=gene-C9F09_05420;Name=C9F09_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05420 PYKB01000441.1 Protein Homology CDS 1119 2291 . + 0 ID=cds-TGC98792.1;Parent=gene-C9F09_05420;Dbxref=NCBI_GP:TGC98792.1;Name=TGC98792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=C9F09_05420;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=TGC98792.1;transl_table=11 PYKB01000441.1 Genbank gene 2442 2909 . + . ID=gene-C9F09_05425;Name=C9F09_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05425 PYKB01000441.1 Protein Homology CDS 2442 2909 . + 0 ID=cds-TGC98793.1;Parent=gene-C9F09_05425;Dbxref=NCBI_GP:TGC98793.1;Name=TGC98793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456610.1;locus_tag=C9F09_05425;product=DNA gyrase inhibitor SbmC;protein_id=TGC98793.1;transl_table=11 PYKB01000441.1 Genbank gene 3028 4086 . + . ID=gene-C9F09_05430;Name=C9F09_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05430 PYKB01000441.1 Protein Homology CDS 3028 4086 . + 0 ID=cds-TGC98794.1;Parent=gene-C9F09_05430;Dbxref=NCBI_GP:TGC98794.1;Name=TGC98794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=C9F09_05430;product=FUSC family protein;protein_id=TGC98794.1;transl_table=11 PYKB01000441.1 Genbank gene 4331 4666 . + . ID=gene-C9F09_05435;Name=C9F09_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05435 PYKB01000441.1 Protein Homology CDS 4331 4666 . + 0 ID=cds-TGC98795.1;Parent=gene-C9F09_05435;Dbxref=NCBI_GP:TGC98795.1;Name=TGC98795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456608.1;locus_tag=C9F09_05435;product=DUF496 domain-containing protein;protein_id=TGC98795.1;transl_table=11 PYKB01000441.1 Genbank gene 4700 5602 . - . ID=gene-C9F09_05440;Name=C9F09_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05440 PYKB01000441.1 Protein Homology CDS 4700 5602 . - 0 ID=cds-TGC98796.1;Parent=gene-C9F09_05440;Dbxref=NCBI_GP:TGC98796.1;Name=TGC98796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456607.1;locus_tag=C9F09_05440;product=L-threonine kinase;protein_id=TGC98796.1;transl_table=11 PYKB01000441.1 Genbank pseudogene 5660 6160 . - . ID=gene-C9F09_05445;Name=C9F09_05445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05445;pseudo=true PYKB01000441.1 Protein Homology CDS 5660 6160 . - 0 ID=cds-C9F09_05445;Parent=gene-C9F09_05445;Note=Enables the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=C9F09_05445;product=acetate kinase;pseudo=true;transl_table=11 ##sequence-region PYKB01000354.1 1 6171 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000354.1 Genbank region 1 6171 . + . ID=PYKB01000354.1:1..6171;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000354.1 Genbank gene 1 421 . - . ID=gene-C9F09_03980;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=C9F09_03980;partial=true;start_range=.,1 PYKB01000354.1 Protein Homology CDS 1 421 . - 0 ID=cds-TGD00434.1;Parent=gene-C9F09_03980;Dbxref=NCBI_GP:TGD00434.1;Name=TGD00434.1;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=C9F09_03980;partial=true;product=30S ribosomal protein S2;protein_id=TGD00434.1;start_range=.,1;transl_table=11 PYKB01000354.1 Genbank gene 872 1666 . + . ID=gene-C9F09_03985;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=C9F09_03985 PYKB01000354.1 Protein Homology CDS 872 1666 . + 0 ID=cds-TGD00430.1;Parent=gene-C9F09_03985;Dbxref=NCBI_GP:TGD00430.1;Name=TGD00430.1;gbkey=CDS;gene=map;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454822.1;locus_tag=C9F09_03985;product=methionine aminopeptidase;protein_id=TGD00430.1;transl_table=11 PYKB01000354.1 Genbank gene 1567 1815 . - . ID=gene-C9F09_03990;Name=C9F09_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03990 PYKB01000354.1 Protein Homology CDS 1567 1815 . - 0 ID=cds-TGD00431.1;Parent=gene-C9F09_03990;Dbxref=NCBI_GP:TGD00431.1;Name=TGD00431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478351.1;locus_tag=C9F09_03990;product=hypothetical protein;protein_id=TGD00431.1;transl_table=11 PYKB01000354.1 Genbank gene 1904 4576 . + . ID=gene-C9F09_03995;Name=C9F09_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03995 PYKB01000354.1 Protein Homology CDS 1904 4576 . + 0 ID=cds-TGD00432.1;Parent=gene-C9F09_03995;Dbxref=NCBI_GP:TGD00432.1;Name=TGD00432.1;Note=catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=C9F09_03995;product=[protein-PII] uridylyltransferase;protein_id=TGD00432.1;transl_table=11 PYKB01000354.1 Genbank gene 4606 5430 . + . ID=gene-C9F09_04000;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=C9F09_04000 PYKB01000354.1 Protein Homology CDS 4606 5430 . + 0 ID=cds-TGD00433.1;Parent=gene-C9F09_04000;Dbxref=NCBI_GP:TGD00433.1;Name=TGD00433.1;gbkey=CDS;gene=dapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=C9F09_04000;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=TGD00433.1;transl_table=11 PYKB01000354.1 Genbank gene 5467 6171 . - . ID=gene-C9F09_04005;Name=C9F09_04005;end_range=6171,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04005;partial=true PYKB01000354.1 Protein Homology CDS 5467 6171 . - 0 ID=cds-TGD00435.1;Parent=gene-C9F09_04005;Dbxref=NCBI_GP:TGD00435.1;Name=TGD00435.1;end_range=6171,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=C9F09_04005;partial=true;product=MFS transporter;protein_id=TGD00435.1;transl_table=11 ##sequence-region PYKB01000709.1 1 13416 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000709.1 Genbank region 1 13416 . + . ID=PYKB01000709.1:1..13416;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000709.1 Genbank gene 1 317 . + . ID=gene-C9F09_10775;Name=C9F09_10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10775;partial=true;start_range=.,1 PYKB01000709.1 Protein Homology CDS 1 317 . + 2 ID=cds-TGC93564.1;Parent=gene-C9F09_10775;Dbxref=NCBI_GP:TGC93564.1;Name=TGC93564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456091.1;locus_tag=C9F09_10775;partial=true;product=oxidoreductase;protein_id=TGC93564.1;start_range=.,1;transl_table=11 PYKB01000709.1 Genbank gene 397 918 . + . ID=gene-C9F09_10780;Name=C9F09_10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10780 PYKB01000709.1 Protein Homology CDS 397 918 . + 0 ID=cds-TGC93565.1;Parent=gene-C9F09_10780;Dbxref=NCBI_GP:TGC93565.1;Name=TGC93565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=C9F09_10780;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=TGC93565.1;transl_table=11 PYKB01000709.1 Genbank gene 894 2933 . - . ID=gene-C9F09_10785;Name=C9F09_10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10785 PYKB01000709.1 Protein Homology CDS 894 2933 . - 0 ID=cds-TGC93566.1;Parent=gene-C9F09_10785;Dbxref=NCBI_GP:TGC93566.1;Name=TGC93566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=C9F09_10785;product=FUSC family protein;protein_id=TGC93566.1;transl_table=11 PYKB01000709.1 Genbank gene 2933 3829 . - . ID=gene-C9F09_10790;Name=C9F09_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10790 PYKB01000709.1 Protein Homology CDS 2933 3829 . - 0 ID=cds-TGC93567.1;Parent=gene-C9F09_10790;Dbxref=NCBI_GP:TGC93567.1;Name=TGC93567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460405.1;locus_tag=C9F09_10790;product=efflux transporter periplasmic adaptor subunit;protein_id=TGC93567.1;transl_table=11 PYKB01000709.1 Genbank gene 3796 4032 . - . ID=gene-C9F09_10795;Name=C9F09_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10795 PYKB01000709.1 Protein Homology CDS 3796 4032 . - 0 ID=cds-TGC93568.1;Parent=gene-C9F09_10795;Dbxref=NCBI_GP:TGC93568.1;Name=TGC93568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=C9F09_10795;product=DUF1656 domain-containing protein;protein_id=TGC93568.1;transl_table=11 PYKB01000709.1 Genbank gene 4227 4667 . + . ID=gene-C9F09_10800;Name=C9F09_10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10800 PYKB01000709.1 Protein Homology CDS 4227 4667 . + 0 ID=cds-TGC93569.1;Parent=gene-C9F09_10800;Dbxref=NCBI_GP:TGC93569.1;Name=TGC93569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=C9F09_10800;product=transcriptional regulator SlyA;protein_id=TGC93569.1;transl_table=11 PYKB01000709.1 Genbank gene 4715 5182 . - . ID=gene-C9F09_10805;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=C9F09_10805 PYKB01000709.1 Protein Homology CDS 4715 5182 . - 0 ID=cds-TGC93570.1;Parent=gene-C9F09_10805;Dbxref=NCBI_GP:TGC93570.1;Name=TGC93570.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456085.1;locus_tag=C9F09_10805;product=outer membrane lipoprotein SlyB;protein_id=TGC93570.1;transl_table=11 PYKB01000709.1 Genbank gene 5455 6576 . + . ID=gene-C9F09_10810;Name=C9F09_10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10810 PYKB01000709.1 Protein Homology CDS 5455 6576 . + 0 ID=cds-TGC93571.1;Parent=gene-C9F09_10810;Dbxref=NCBI_GP:TGC93571.1;Name=TGC93571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456084.1;locus_tag=C9F09_10810;product=anhydro-N-acetylmuramic acid kinase;protein_id=TGC93571.1;transl_table=11 PYKB01000709.1 Genbank gene 6664 6993 . + . ID=gene-C9F09_10815;Name=C9F09_10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10815 PYKB01000709.1 Protein Homology CDS 6664 6993 . + 0 ID=cds-TGC93572.1;Parent=gene-C9F09_10815;Dbxref=NCBI_GP:TGC93572.1;Name=TGC93572.1;Note=MliC%3B membrane-bound lysozyme inhibitor of c-type lysozyme;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=C9F09_10815;product=lysozyme inhibitor;protein_id=TGC93572.1;transl_table=11 PYKB01000709.1 Genbank gene 7052 7708 . + . ID=gene-C9F09_10820;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=C9F09_10820 PYKB01000709.1 Protein Homology CDS 7052 7708 . + 0 ID=cds-TGC93573.1;Parent=gene-C9F09_10820;Dbxref=NCBI_GP:TGC93573.1;Name=TGC93573.1;gbkey=CDS;gene=pdxH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=C9F09_10820;product=pyridoxine/pyridoxamine 5'-phosphate oxidase;protein_id=TGC93573.1;transl_table=11 PYKB01000709.1 Genbank gene 7835 9109 . + . ID=gene-C9F09_10825;Name=C9F09_10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10825 PYKB01000709.1 Protein Homology CDS 7835 9109 . + 0 ID=cds-TGC93574.1;Parent=gene-C9F09_10825;Dbxref=NCBI_GP:TGC93574.1;Name=TGC93574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456081.1;locus_tag=C9F09_10825;product=tyrosine--tRNA ligase;protein_id=TGC93574.1;transl_table=11 PYKB01000709.1 Genbank gene 9169 10029 . + . ID=gene-C9F09_10830;Name=C9F09_10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10830 PYKB01000709.1 Protein Homology CDS 9169 10029 . + 0 ID=cds-TGC93575.1;Parent=gene-C9F09_10830;Dbxref=NCBI_GP:TGC93575.1;Name=TGC93575.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=C9F09_10830;product=pyridoxal kinase;protein_id=TGC93575.1;transl_table=11 PYKB01000709.1 Genbank gene 10088 10693 . - . ID=gene-C9F09_10835;Name=C9F09_10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10835 PYKB01000709.1 Protein Homology CDS 10088 10693 . - 0 ID=cds-TGC93576.1;Parent=gene-C9F09_10835;Dbxref=NCBI_GP:TGC93576.1;Name=TGC93576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=C9F09_10835;product=glutathione transferase GstA;protein_id=TGC93576.1;transl_table=11 PYKB01000709.1 Genbank gene 10798 12303 . - . ID=gene-C9F09_10840;Name=C9F09_10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10840 PYKB01000709.1 Protein Homology CDS 10798 12303 . - 0 ID=cds-TGC93577.1;Parent=gene-C9F09_10840;Dbxref=NCBI_GP:TGC93577.1;Name=TGC93577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=C9F09_10840;product=dipeptide and tripeptide permease A;protein_id=TGC93577.1;transl_table=11 PYKB01000709.1 Genbank gene 12905 13416 . - . ID=gene-C9F09_10845;Name=nth;end_range=13416,.;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=C9F09_10845;partial=true PYKB01000709.1 Protein Homology CDS 12905 13416 . - 2 ID=cds-TGC93578.1;Parent=gene-C9F09_10845;Dbxref=NCBI_GP:TGC93578.1;Name=TGC93578.1;end_range=13416,.;gbkey=CDS;gene=nth;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=C9F09_10845;partial=true;product=endonuclease III;protein_id=TGC93578.1;transl_table=11 ##sequence-region PYKB01000896.1 1 6150 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000896.1 Genbank region 1 6150 . + . ID=PYKB01000896.1:1..6150;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000896.1 Genbank pseudogene 66 203 . - . ID=gene-C9F09_14735;Name=C9F09_14735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_14735;pseudo=true PYKB01000896.1 Protein Homology CDS 66 203 . - 0 ID=cds-C9F09_14735;Parent=gene-C9F09_14735;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=C9F09_14735;product=septum site-determining protein minD;pseudo=true;transl_table=11 PYKB01000896.1 Genbank gene 227 934 . - . ID=gene-C9F09_14740;Name=C9F09_14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14740 PYKB01000896.1 Protein Homology CDS 227 934 . - 0 ID=cds-TGC90250.1;Parent=gene-C9F09_14740;Dbxref=NCBI_GP:TGC90250.1;Name=TGC90250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456321.1;locus_tag=C9F09_14740;product=septum site-determining protein MinC;protein_id=TGC90250.1;transl_table=11 PYKB01000896.1 Genbank gene 1021 1353 . + . ID=gene-C9F09_14745;Name=C9F09_14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14745 PYKB01000896.1 Protein Homology CDS 1021 1353 . + 0 ID=cds-TGC90251.1;Parent=gene-C9F09_14745;Dbxref=NCBI_GP:TGC90251.1;Name=TGC90251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460769.1;locus_tag=C9F09_14745;product=hypothetical protein;protein_id=TGC90251.1;transl_table=11 PYKB01000896.1 Genbank gene 1403 2062 . + . ID=gene-C9F09_14750;Name=C9F09_14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14750 PYKB01000896.1 Protein Homology CDS 1403 2062 . + 0 ID=cds-TGC90257.1;Parent=gene-C9F09_14750;Dbxref=NCBI_GP:TGC90257.1;Name=TGC90257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456319.1;locus_tag=C9F09_14750;product=fumarylacetoacetate hydrolase family protein;protein_id=TGC90257.1;transl_table=11 PYKB01000896.1 Genbank gene 2140 2601 . + . ID=gene-C9F09_14755;Name=C9F09_14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14755 PYKB01000896.1 Protein Homology CDS 2140 2601 . + 0 ID=cds-TGC90252.1;Parent=gene-C9F09_14755;Dbxref=NCBI_GP:TGC90252.1;Name=TGC90252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460767.3;locus_tag=C9F09_14755;product=YcgN family cysteine cluster protein;protein_id=TGC90252.1;transl_table=11 PYKB01000896.1 Genbank gene 2953 3090 . + . ID=gene-C9F09_14760;Name=C9F09_14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14760 PYKB01000896.1 Protein Homology CDS 2953 3090 . + 0 ID=cds-TGC90253.1;Parent=gene-C9F09_14760;Dbxref=NCBI_GP:TGC90253.1;Name=TGC90253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=C9F09_14760;product=hypothetical protein;protein_id=TGC90253.1;transl_table=11 PYKB01000896.1 Genbank gene 3282 3455 . + . ID=gene-C9F09_14765;Name=C9F09_14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14765 PYKB01000896.1 Protein Homology CDS 3282 3455 . + 0 ID=cds-TGC90254.1;Parent=gene-C9F09_14765;Dbxref=NCBI_GP:TGC90254.1;Name=TGC90254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456316.1;locus_tag=C9F09_14765;product=protein gns;protein_id=TGC90254.1;transl_table=11 PYKB01000896.1 Genbank gene 3527 3868 . - . ID=gene-C9F09_14770;Name=C9F09_14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14770 PYKB01000896.1 Protein Homology CDS 3527 3868 . - 0 ID=cds-TGC90255.1;Parent=gene-C9F09_14770;Dbxref=NCBI_GP:TGC90255.1;Name=TGC90255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=C9F09_14770;product=DUF1971 domain-containing protein;protein_id=TGC90255.1;transl_table=11 PYKB01000896.1 Genbank gene 3977 4507 . - . ID=gene-C9F09_14775;Name=C9F09_14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14775 PYKB01000896.1 Protein Homology CDS 3977 4507 . - 0 ID=cds-TGC90256.1;Parent=gene-C9F09_14775;Dbxref=NCBI_GP:TGC90256.1;Name=TGC90256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456314.1;locus_tag=C9F09_14775;product=disulfide bond formation protein DsbB;protein_id=TGC90256.1;transl_table=11 PYKB01000896.1 Genbank gene 4649 6150 . - . ID=gene-C9F09_14780;Name=nhaB;end_range=6150,.;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=C9F09_14780;partial=true PYKB01000896.1 Protein Homology CDS 4649 6150 . - 2 ID=cds-TGC90258.1;Parent=gene-C9F09_14780;Dbxref=NCBI_GP:TGC90258.1;Name=TGC90258.1;Note=involved in regulation of intracellular pH under alkaline conditions;end_range=6150,.;gbkey=CDS;gene=nhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456313.1;locus_tag=C9F09_14780;partial=true;product=sodium/proton antiporter;protein_id=TGC90258.1;transl_table=11 ##sequence-region PYKB01000736.1 1 6131 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000736.1 Genbank region 1 6131 . + . ID=PYKB01000736.1:1..6131;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000736.1 Genbank gene 1 1401 . + . ID=gene-C9F09_11305;Name=C9F09_11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11305;partial=true;start_range=.,1 PYKB01000736.1 Protein Homology CDS 1 1401 . + 0 ID=cds-TGC93191.1;Parent=gene-C9F09_11305;Dbxref=NCBI_GP:TGC93191.1;Name=TGC93191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=C9F09_11305;partial=true;product=chitinase;protein_id=TGC93191.1;start_range=.,1;transl_table=11 PYKB01000736.1 Genbank gene 1494 4490 . + . ID=gene-C9F09_11310;Name=C9F09_11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11310 PYKB01000736.1 Protein Homology CDS 1494 4490 . + 0 ID=cds-TGC93192.1;Parent=gene-C9F09_11310;Dbxref=NCBI_GP:TGC93192.1;Name=TGC93192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=C9F09_11310;product=chitinase;protein_id=TGC93192.1;transl_table=11 PYKB01000736.1 Genbank gene 4771 5475 . + . ID=gene-C9F09_11315;Name=C9F09_11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11315 PYKB01000736.1 Protein Homology CDS 4771 5475 . + 0 ID=cds-TGC93193.1;Parent=gene-C9F09_11315;Dbxref=NCBI_GP:TGC93193.1;Name=TGC93193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459025.1;locus_tag=C9F09_11315;product=cytoplasmic protein;protein_id=TGC93193.1;transl_table=11 PYKB01000736.1 Genbank gene 5905 6131 . + . ID=gene-C9F09_11320;Name=C9F09_11320;end_range=6131,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11320;partial=true PYKB01000736.1 Protein Homology CDS 5905 6131 . + 0 ID=cds-TGC93194.1;Parent=gene-C9F09_11320;Dbxref=NCBI_GP:TGC93194.1;Name=TGC93194.1;end_range=6131,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454632.1;locus_tag=C9F09_11320;partial=true;product=hypothetical protein;protein_id=TGC93194.1;transl_table=11 ##sequence-region PYKB01001554.1 1 6117 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001554.1 Genbank region 1 6117 . + . ID=PYKB01001554.1:1..6117;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001554.1 Genbank gene 1 742 . + . ID=gene-C9F09_27140;Name=C9F09_27140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27140;partial=true;start_range=.,1 PYKB01001554.1 Protein Homology CDS 1 742 . + 1 ID=cds-TGC75941.1;Parent=gene-C9F09_27140;Dbxref=NCBI_GP:TGC75941.1;Name=TGC75941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456937.1;locus_tag=C9F09_27140;partial=true;product=omptin family outer membrane protease;protein_id=TGC75941.1;start_range=.,1;transl_table=11 PYKB01001554.1 Genbank gene 1486 2115 . - . ID=gene-C9F09_27145;Name=C9F09_27145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27145 PYKB01001554.1 GeneMarkS+ CDS 1486 2115 . - 0 ID=cds-TGC75937.1;Parent=gene-C9F09_27145;Dbxref=NCBI_GP:TGC75937.1;Name=TGC75937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_27145;product=hypothetical protein;protein_id=TGC75937.1;transl_table=11 PYKB01001554.1 Genbank gene 2112 4133 . - . ID=gene-C9F09_27150;Name=C9F09_27150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27150 PYKB01001554.1 Protein Homology CDS 2112 4133 . - 0 ID=cds-TGC75938.1;Parent=gene-C9F09_27150;Dbxref=NCBI_GP:TGC75938.1;Name=TGC75938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000093896.1;locus_tag=C9F09_27150;product=DNA helicase;protein_id=TGC75938.1;transl_table=11 PYKB01001554.1 Genbank gene 4574 4846 . - . ID=gene-C9F09_27155;Name=C9F09_27155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27155 PYKB01001554.1 Protein Homology CDS 4574 4846 . - 0 ID=cds-TGC75939.1;Parent=gene-C9F09_27155;Dbxref=NCBI_GP:TGC75939.1;Name=TGC75939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308323.1;locus_tag=C9F09_27155;product=hypothetical protein;protein_id=TGC75939.1;transl_table=11 PYKB01001554.1 Genbank gene 4846 5607 . - . ID=gene-C9F09_27160;Name=C9F09_27160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27160 PYKB01001554.1 Protein Homology CDS 4846 5607 . - 0 ID=cds-TGC75940.1;Parent=gene-C9F09_27160;Dbxref=NCBI_GP:TGC75940.1;Name=TGC75940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071218.1;locus_tag=C9F09_27160;product=septation initiation protein;protein_id=TGC75940.1;transl_table=11 ##sequence-region PYKB01001112.1 1 6108 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001112.1 Genbank region 1 6108 . + . ID=PYKB01001112.1:1..6108;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001112.1 Genbank gene 1 115 . + . ID=gene-C9F09_18675;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=C9F09_18675;partial=true;start_range=.,1 PYKB01001112.1 Protein Homology CDS 1 115 . + 1 ID=cds-TGC85686.1;Parent=gene-C9F09_18675;Dbxref=NCBI_GP:TGC85686.1;Name=TGC85686.1;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=C9F09_18675;partial=true;product=preprotein translocase subunit YajC;protein_id=TGC85686.1;start_range=.,1;transl_table=11 PYKB01001112.1 Genbank gene 143 1990 . + . ID=gene-C9F09_18680;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=C9F09_18680 PYKB01001112.1 Protein Homology CDS 143 1990 . + 0 ID=cds-TGC85687.1;Parent=gene-C9F09_18680;Dbxref=NCBI_GP:TGC85687.1;Name=TGC85687.1;gbkey=CDS;gene=secD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=C9F09_18680;product=protein translocase subunit SecD;protein_id=TGC85687.1;transl_table=11 PYKB01001112.1 Genbank gene 2001 2972 . + . ID=gene-C9F09_18685;Name=C9F09_18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18685 PYKB01001112.1 Protein Homology CDS 2001 2972 . + 0 ID=cds-TGC85688.1;Parent=gene-C9F09_18685;Dbxref=NCBI_GP:TGC85688.1;Name=TGC85688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455003.1;locus_tag=C9F09_18685;product=protein translocase subunit SecF;protein_id=TGC85688.1;transl_table=11 PYKB01001112.1 Genbank gene 3066 3413 . + . ID=gene-C9F09_18690;Name=C9F09_18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18690 PYKB01001112.1 Protein Homology CDS 3066 3413 . + 0 ID=cds-TGC85689.1;Parent=gene-C9F09_18690;Dbxref=NCBI_GP:TGC85689.1;Name=TGC85689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455006.1;locus_tag=C9F09_18690;product=HNH endonuclease;protein_id=TGC85689.1;transl_table=11 PYKB01001112.1 Genbank gene 3431 3670 . + . ID=gene-C9F09_18695;Name=C9F09_18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18695 PYKB01001112.1 Protein Homology CDS 3431 3670 . + 0 ID=cds-TGC85690.1;Parent=gene-C9F09_18695;Dbxref=NCBI_GP:TGC85690.1;Name=TGC85690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012532520.1;locus_tag=C9F09_18695;product=hypothetical protein;protein_id=TGC85690.1;transl_table=11 PYKB01001112.1 Genbank gene 3661 3987 . - . ID=gene-C9F09_18700;Name=C9F09_18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18700 PYKB01001112.1 Protein Homology CDS 3661 3987 . - 0 ID=cds-TGC85691.1;Parent=gene-C9F09_18700;Dbxref=NCBI_GP:TGC85691.1;Name=TGC85691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446866.1;locus_tag=C9F09_18700;product=hypothetical protein;protein_id=TGC85691.1;transl_table=11 PYKB01001112.1 Genbank gene 4042 4905 . - . ID=gene-C9F09_18705;Name=C9F09_18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18705 PYKB01001112.1 Protein Homology CDS 4042 4905 . - 0 ID=cds-TGC85692.1;Parent=gene-C9F09_18705;Dbxref=NCBI_GP:TGC85692.1;Name=TGC85692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455008.1;locus_tag=C9F09_18705;product=nucleoside-specific channel-forming protein Tsx;protein_id=TGC85692.1;transl_table=11 PYKB01001112.1 Genbank gene 5205 5744 . - . ID=gene-C9F09_18710;Name=C9F09_18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18710 PYKB01001112.1 Protein Homology CDS 5205 5744 . - 0 ID=cds-TGC85693.1;Parent=gene-C9F09_18710;Dbxref=NCBI_GP:TGC85693.1;Name=TGC85693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=C9F09_18710;product=DUF3251 domain-containing protein;protein_id=TGC85693.1;transl_table=11 PYKB01001112.1 Genbank gene 5896 6108 . + . ID=gene-C9F09_18715;Name=C9F09_18715;end_range=6108,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18715;partial=true PYKB01001112.1 Protein Homology CDS 5896 6108 . + 0 ID=cds-TGC85694.1;Parent=gene-C9F09_18715;Dbxref=NCBI_GP:TGC85694.1;Name=TGC85694.1;end_range=6108,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=C9F09_18715;partial=true;product=transcriptional repressor NrdR;protein_id=TGC85694.1;transl_table=11 ##sequence-region PYKB01000879.1 1 6094 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000879.1 Genbank region 1 6094 . + . ID=PYKB01000879.1:1..6094;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000879.1 Genbank gene 1 1691 . + . ID=gene-C9F09_14315;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=C9F09_14315;partial=true;start_range=.,1 PYKB01000879.1 Protein Homology CDS 1 1691 . + 2 ID=cds-TGC90645.1;Parent=gene-C9F09_14315;Dbxref=NCBI_GP:TGC90645.1;Name=TGC90645.1;gbkey=CDS;gene=hypF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=C9F09_14315;partial=true;product=carbamoyltransferase HypF;protein_id=TGC90645.1;start_range=.,1;transl_table=11 PYKB01000879.1 Genbank gene 1788 2921 . - . ID=gene-C9F09_14320;Name=C9F09_14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14320 PYKB01000879.1 Protein Homology CDS 1788 2921 . - 0 ID=cds-TGC90646.1;Parent=gene-C9F09_14320;Dbxref=NCBI_GP:TGC90646.1;Name=TGC90646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=C9F09_14320;product=nitric oxide reductase FlRd-NAD+ reductase;protein_id=TGC90646.1;transl_table=11 PYKB01000879.1 Genbank gene 2918 4357 . - . ID=gene-C9F09_14325;Name=C9F09_14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14325 PYKB01000879.1 Protein Homology CDS 2918 4357 . - 0 ID=cds-TGC90647.1;Parent=gene-C9F09_14325;Dbxref=NCBI_GP:TGC90647.1;Name=TGC90647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457234.1;locus_tag=C9F09_14325;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=TGC90647.1;transl_table=11 PYKB01000879.1 Genbank gene 4543 6094 . + . ID=gene-C9F09_14330;Name=C9F09_14330;end_range=6094,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14330;partial=true PYKB01000879.1 Protein Homology CDS 4543 6094 . + 0 ID=cds-TGC90648.1;Parent=gene-C9F09_14330;Dbxref=NCBI_GP:TGC90648.1;Name=TGC90648.1;end_range=6094,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=C9F09_14330;partial=true;product=nitric oxide reductase transcriptional regulator NorR;protein_id=TGC90648.1;transl_table=11 ##sequence-region PYKB01001017.1 1 6075 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001017.1 Genbank region 1 6075 . + . ID=PYKB01001017.1:1..6075;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001017.1 Genbank gene 375 4214 . - . ID=gene-C9F09_17010;Name=C9F09_17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17010 PYKB01001017.1 Protein Homology CDS 375 4214 . - 0 ID=cds-TGC87860.1;Parent=gene-C9F09_17010;Dbxref=NCBI_GP:TGC87860.1;Name=TGC87860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=C9F09_17010;product=hypothetical protein;protein_id=TGC87860.1;transl_table=11 PYKB01001017.1 Genbank gene 4258 4941 . - . ID=gene-C9F09_17015;Name=C9F09_17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17015 PYKB01001017.1 Protein Homology CDS 4258 4941 . - 0 ID=cds-TGC87861.1;Parent=gene-C9F09_17015;Dbxref=NCBI_GP:TGC87861.1;Name=TGC87861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462590.1;locus_tag=C9F09_17015;product=hypothetical protein;protein_id=TGC87861.1;transl_table=11 PYKB01001017.1 Genbank gene 5187 5396 . - . ID=gene-C9F09_17020;Name=C9F09_17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17020 PYKB01001017.1 Protein Homology CDS 5187 5396 . - 0 ID=cds-TGC87862.1;Parent=gene-C9F09_17020;Dbxref=NCBI_GP:TGC87862.1;Name=TGC87862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001522238.1;locus_tag=C9F09_17020;product=hypothetical protein;protein_id=TGC87862.1;transl_table=11 PYKB01001017.1 Genbank gene 5429 5791 . - . ID=gene-C9F09_17025;Name=C9F09_17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17025 PYKB01001017.1 Protein Homology CDS 5429 5791 . - 0 ID=cds-TGC87863.1;Parent=gene-C9F09_17025;Dbxref=NCBI_GP:TGC87863.1;Name=TGC87863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458237.1;locus_tag=C9F09_17025;product=hypothetical protein;protein_id=TGC87863.1;transl_table=11 ##sequence-region PYKB01000465.1 1 6057 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000465.1 Genbank region 1 6057 . + . ID=PYKB01000465.1:1..6057;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000465.1 Genbank pseudogene 40 249 . + . ID=gene-C9F09_05805;Name=C9F09_05805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05805;pseudo=true PYKB01000465.1 Protein Homology CDS 40 249 . + 0 ID=cds-C9F09_05805;Parent=gene-C9F09_05805;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457015.1;locus_tag=C9F09_05805;product=RND transporter;pseudo=true;transl_table=11 PYKB01000465.1 Genbank gene 351 410 . - . ID=gene-C9F09_05810;Name=C9F09_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05810 PYKB01000465.1 Protein Homology CDS 351 410 . - 0 ID=cds-TGC98373.1;Parent=gene-C9F09_05810;Dbxref=NCBI_GP:TGC98373.1;Name=TGC98373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=C9F09_05810;product=hypothetical protein;protein_id=TGC98373.1;transl_table=11 PYKB01000465.1 Genbank gene 823 1179 . + . ID=gene-C9F09_05815;Name=C9F09_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05815 PYKB01000465.1 Protein Homology CDS 823 1179 . + 0 ID=cds-TGC98368.1;Parent=gene-C9F09_05815;Dbxref=NCBI_GP:TGC98368.1;Name=TGC98368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457016.1;locus_tag=C9F09_05815;product=ArsC family reductase;protein_id=TGC98368.1;transl_table=11 PYKB01000465.1 Genbank gene 1183 2310 . + . ID=gene-C9F09_05820;Name=C9F09_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05820 PYKB01000465.1 Protein Homology CDS 1183 2310 . + 0 ID=cds-TGC98369.1;Parent=gene-C9F09_05820;Dbxref=NCBI_GP:TGC98369.1;Name=TGC98369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=C9F09_05820;product=succinyl-diaminopimelate desuccinylase;protein_id=TGC98369.1;transl_table=11 PYKB01000465.1 Genbank gene 2338 2538 . + . ID=gene-C9F09_05825;Name=C9F09_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05825 PYKB01000465.1 Protein Homology CDS 2338 2538 . + 0 ID=cds-TGC98370.1;Parent=gene-C9F09_05825;Dbxref=NCBI_GP:TGC98370.1;Name=TGC98370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457018.1;locus_tag=C9F09_05825;product=hypothetical protein;protein_id=TGC98370.1;transl_table=11 PYKB01000465.1 Genbank gene 2565 4583 . - . ID=gene-C9F09_05830;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=C9F09_05830 PYKB01000465.1 Protein Homology CDS 2565 4583 . - 0 ID=cds-TGC98371.1;Parent=gene-C9F09_05830;Dbxref=NCBI_GP:TGC98371.1;Name=TGC98371.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457019.1;locus_tag=C9F09_05830;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=TGC98371.1;transl_table=11 PYKB01000465.1 Genbank gene 4599 5462 . - . ID=gene-C9F09_05835;Name=C9F09_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05835 PYKB01000465.1 Protein Homology CDS 4599 5462 . - 0 ID=cds-TGC98372.1;Parent=gene-C9F09_05835;Dbxref=NCBI_GP:TGC98372.1;Name=TGC98372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=C9F09_05835;product=neutral zinc metallopeptidase;protein_id=TGC98372.1;transl_table=11 PYKB01000465.1 Genbank gene 5593 6057 . - . ID=gene-C9F09_05840;Name=C9F09_05840;end_range=6057,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05840;partial=true PYKB01000465.1 Protein Homology CDS 5593 6057 . - 0 ID=cds-TGC98374.1;Parent=gene-C9F09_05840;Dbxref=NCBI_GP:TGC98374.1;Name=TGC98374.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;end_range=6057,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=C9F09_05840;partial=true;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=TGC98374.1;transl_table=11 ##sequence-region PYKB01000430.1 1 6043 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000430.1 Genbank region 1 6043 . + . ID=PYKB01000430.1:1..6043;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000430.1 Genbank gene 1 452 . - . ID=gene-C9F09_05095;Name=C9F09_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05095;partial=true;start_range=.,1 PYKB01000430.1 Protein Homology CDS 1 452 . - 0 ID=cds-TGC99033.1;Parent=gene-C9F09_05095;Dbxref=NCBI_GP:TGC99033.1;Name=TGC99033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457358.1;locus_tag=C9F09_05095;partial=true;product=MFS transporter;protein_id=TGC99033.1;start_range=.,1;transl_table=11 PYKB01000430.1 Genbank gene 535 783 . + . ID=gene-C9F09_05100;Name=C9F09_05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05100 PYKB01000430.1 Protein Homology CDS 535 783 . + 0 ID=cds-TGC99034.1;Parent=gene-C9F09_05100;Dbxref=NCBI_GP:TGC99034.1;Name=TGC99034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531815.1;locus_tag=C9F09_05100;product=hypothetical protein;protein_id=TGC99034.1;transl_table=11 PYKB01000430.1 Genbank gene 933 1382 . - . ID=gene-C9F09_05105;Name=C9F09_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05105 PYKB01000430.1 Protein Homology CDS 933 1382 . - 0 ID=cds-TGC99027.1;Parent=gene-C9F09_05105;Dbxref=NCBI_GP:TGC99027.1;Name=TGC99027.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457359.1;locus_tag=C9F09_05105;product=flavodoxin;protein_id=TGC99027.1;transl_table=11 PYKB01000430.1 Genbank gene 1401 2183 . - . ID=gene-C9F09_05110;Name=C9F09_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05110 PYKB01000430.1 Protein Homology CDS 1401 2183 . - 0 ID=cds-TGC99028.1;Parent=gene-C9F09_05110;Dbxref=NCBI_GP:TGC99028.1;Name=TGC99028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=C9F09_05110;product=tRNA pseudouridine(65) synthase TruC;protein_id=TGC99028.1;transl_table=11 PYKB01000430.1 Genbank gene 2183 2512 . - . ID=gene-C9F09_05115;Name=C9F09_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05115 PYKB01000430.1 Protein Homology CDS 2183 2512 . - 0 ID=cds-TGC99035.1;Parent=gene-C9F09_05115;Dbxref=NCBI_GP:TGC99035.1;Name=TGC99035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457361.1;locus_tag=C9F09_05115;product=hypothetical protein;protein_id=TGC99035.1;transl_table=11 PYKB01000430.1 Genbank gene 2668 2880 . - . ID=gene-C9F09_05120;Name=C9F09_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05120 PYKB01000430.1 Protein Homology CDS 2668 2880 . - 0 ID=cds-TGC99029.1;Parent=gene-C9F09_05120;Dbxref=NCBI_GP:TGC99029.1;Name=TGC99029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988723.1;locus_tag=C9F09_05120;product=hypothetical protein;protein_id=TGC99029.1;transl_table=11 PYKB01000430.1 Genbank gene 3124 3669 . - . ID=gene-C9F09_05125;Name=C9F09_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05125 PYKB01000430.1 Protein Homology CDS 3124 3669 . - 0 ID=cds-TGC99030.1;Parent=gene-C9F09_05125;Dbxref=NCBI_GP:TGC99030.1;Name=TGC99030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457362.1;locus_tag=C9F09_05125;product=protein Syd;protein_id=TGC99030.1;transl_table=11 PYKB01000430.1 Genbank gene 3738 4586 . + . ID=gene-C9F09_05130;Name=C9F09_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05130 PYKB01000430.1 Protein Homology CDS 3738 4586 . + 0 ID=cds-TGC99031.1;Parent=gene-C9F09_05130;Dbxref=NCBI_GP:TGC99031.1;Name=TGC99031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457363.1;locus_tag=C9F09_05130;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=TGC99031.1;transl_table=11 PYKB01000430.1 Genbank gene 4699 6043 . + . ID=gene-C9F09_05135;Name=C9F09_05135;end_range=6043,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05135;partial=true PYKB01000430.1 Protein Homology CDS 4699 6043 . + 0 ID=cds-TGC99032.1;Parent=gene-C9F09_05135;Dbxref=NCBI_GP:TGC99032.1;Name=TGC99032.1;end_range=6043,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077585.1;locus_tag=C9F09_05135;partial=true;product=LOG family protein;protein_id=TGC99032.1;transl_table=11 ##sequence-region PYKB01001317.1 1 6007 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001317.1 Genbank region 1 6007 . + . ID=PYKB01001317.1:1..6007;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001317.1 Genbank gene 1 1612 . + . ID=gene-C9F09_22630;Name=C9F09_22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22630;partial=true;start_range=.,1 PYKB01001317.1 Protein Homology CDS 1 1612 . + 1 ID=cds-TGC81212.1;Parent=gene-C9F09_22630;Dbxref=NCBI_GP:TGC81212.1;Name=TGC81212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462899.1;locus_tag=C9F09_22630;partial=true;product=alpha-glucosidase;protein_id=TGC81212.1;start_range=.,1;transl_table=11 PYKB01001317.1 Genbank gene 1658 3040 . + . ID=gene-C9F09_22635;Name=C9F09_22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22635 PYKB01001317.1 Protein Homology CDS 1658 3040 . + 0 ID=cds-TGC81213.1;Parent=gene-C9F09_22635;Dbxref=NCBI_GP:TGC81213.1;Name=TGC81213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018363.1;locus_tag=C9F09_22635;product=MFS transporter;protein_id=TGC81213.1;transl_table=11 PYKB01001317.1 Genbank gene 3086 4504 . + . ID=gene-C9F09_22640;Name=C9F09_22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22640 PYKB01001317.1 Protein Homology CDS 3086 4504 . + 0 ID=cds-TGC81214.1;Parent=gene-C9F09_22640;Dbxref=NCBI_GP:TGC81214.1;Name=TGC81214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458033.1;locus_tag=C9F09_22640;product=MFS transporter;protein_id=TGC81214.1;transl_table=11 PYKB01001317.1 Genbank gene 4572 5264 . + . ID=gene-C9F09_22645;Name=C9F09_22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22645 PYKB01001317.1 Protein Homology CDS 4572 5264 . + 0 ID=cds-TGC81215.1;Parent=gene-C9F09_22645;Dbxref=NCBI_GP:TGC81215.1;Name=TGC81215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=C9F09_22645;product=porin OmpL;protein_id=TGC81215.1;transl_table=11 PYKB01001317.1 Genbank pseudogene 5421 5912 . + . ID=gene-C9F09_22650;Name=C9F09_22650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22650;pseudo=true PYKB01001317.1 Protein Homology CDS 5421 5912 . + 0 ID=cds-C9F09_22650;Parent=gene-C9F09_22650;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=C9F09_22650;product=cytoplasmic protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001000.1 1 5991 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001000.1 Genbank region 1 5991 . + . ID=PYKB01001000.1:1..5991;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001000.1 Genbank gene 55 573 . - . ID=gene-C9F09_16705;Name=C9F09_16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16705 PYKB01001000.1 Protein Homology CDS 55 573 . - 0 ID=cds-TGC88215.1;Parent=gene-C9F09_16705;Dbxref=NCBI_GP:TGC88215.1;Name=TGC88215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=C9F09_16705;product=DUF3225 domain-containing protein;protein_id=TGC88215.1;transl_table=11 PYKB01001000.1 Genbank gene 1290 2408 . + . ID=gene-C9F09_16710;Name=C9F09_16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16710 PYKB01001000.1 Protein Homology CDS 1290 2408 . + 0 ID=cds-TGC88216.1;Parent=gene-C9F09_16710;Dbxref=NCBI_GP:TGC88216.1;Name=TGC88216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=C9F09_16710;product=phosphoporin PhoE;protein_id=TGC88216.1;transl_table=11 PYKB01001000.1 Genbank gene 2549 2890 . - . ID=gene-C9F09_16715;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9F09_16715 PYKB01001000.1 Protein Homology CDS 2549 2890 . - 0 ID=cds-TGC88217.1;Parent=gene-C9F09_16715;Dbxref=NCBI_GP:TGC88217.1;Name=TGC88217.1;gbkey=CDS;gene=hypA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=C9F09_16715;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=TGC88217.1;transl_table=11 PYKB01001000.1 Genbank gene 2903 3790 . - . ID=gene-C9F09_16720;Name=C9F09_16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16720 PYKB01001000.1 Protein Homology CDS 2903 3790 . - 0 ID=cds-TGC88218.1;Parent=gene-C9F09_16720;Dbxref=NCBI_GP:TGC88218.1;Name=TGC88218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=C9F09_16720;product=ATP/GTP-binding protein;protein_id=TGC88218.1;transl_table=11 PYKB01001000.1 Genbank gene 3778 4839 . - . ID=gene-C9F09_16725;Name=C9F09_16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16725 PYKB01001000.1 Protein Homology CDS 3778 4839 . - 0 ID=cds-TGC88219.1;Parent=gene-C9F09_16725;Dbxref=NCBI_GP:TGC88219.1;Name=TGC88219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=C9F09_16725;product=hydrogenase-1 operon protein HyaF2;protein_id=TGC88219.1;transl_table=11 PYKB01001000.1 Genbank gene 4857 5267 . - . ID=gene-C9F09_16730;Name=C9F09_16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16730 PYKB01001000.1 Protein Homology CDS 4857 5267 . - 0 ID=cds-TGC88220.1;Parent=gene-C9F09_16730;Dbxref=NCBI_GP:TGC88220.1;Name=TGC88220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455950.1;locus_tag=C9F09_16730;product=hydrogenase;protein_id=TGC88220.1;transl_table=11 PYKB01001000.1 Genbank gene 5264 5563 . - . ID=gene-C9F09_16735;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=C9F09_16735 PYKB01001000.1 Protein Homology CDS 5264 5563 . - 0 ID=cds-TGC88221.1;Parent=gene-C9F09_16735;Dbxref=NCBI_GP:TGC88221.1;Name=TGC88221.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=C9F09_16735;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=TGC88221.1;transl_table=11 PYKB01001000.1 Genbank gene 5563 5991 . - . ID=gene-C9F09_16740;Name=C9F09_16740;end_range=5991,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16740;partial=true PYKB01001000.1 Protein Homology CDS 5563 5991 . - 0 ID=cds-TGC88222.1;Parent=gene-C9F09_16740;Dbxref=NCBI_GP:TGC88222.1;Name=TGC88222.1;end_range=5991,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=C9F09_16740;partial=true;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=TGC88222.1;transl_table=11 ##sequence-region PYKB01000636.1 1 13310 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000636.1 Genbank region 1 13310 . + . ID=PYKB01000636.1:1..13310;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000636.1 Genbank gene 1 356 . - . ID=gene-C9F09_09465;Name=C9F09_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09465;partial=true;start_range=.,1 PYKB01000636.1 Protein Homology CDS 1 356 . - 0 ID=cds-TGC94617.1;Parent=gene-C9F09_09465;Dbxref=NCBI_GP:TGC94617.1;Name=TGC94617.1;Note=serine sensor receptor;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458344.1;locus_tag=C9F09_09465;partial=true;product=methyl-accepting chemotaxis protein II;protein_id=TGC94617.1;start_range=.,1;transl_table=11 PYKB01000636.1 Genbank gene 556 2754 . - . ID=gene-C9F09_09470;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=C9F09_09470 PYKB01000636.1 Protein Homology CDS 556 2754 . - 0 ID=cds-TGC94618.1;Parent=gene-C9F09_09470;Dbxref=NCBI_GP:TGC94618.1;Name=TGC94618.1;Note=P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury;gbkey=CDS;gene=zntA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002414582.1;locus_tag=C9F09_09470;product=zinc/cadmium/mercury/lead-transporting ATPase;protein_id=TGC94618.1;transl_table=11 PYKB01000636.1 Genbank gene 2835 3461 . - . ID=gene-C9F09_09475;Name=C9F09_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09475 PYKB01000636.1 Protein Homology CDS 2835 3461 . - 0 ID=cds-TGC94619.1;Parent=gene-C9F09_09475;Dbxref=NCBI_GP:TGC94619.1;Name=TGC94619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458346.1;locus_tag=C9F09_09475;product=lysoplasmalogenase;protein_id=TGC94619.1;transl_table=11 PYKB01000636.1 Genbank gene 3603 3974 . + . ID=gene-C9F09_09480;Name=C9F09_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09480 PYKB01000636.1 Protein Homology CDS 3603 3974 . + 0 ID=cds-TGC94620.1;Parent=gene-C9F09_09480;Dbxref=NCBI_GP:TGC94620.1;Name=TGC94620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458347.1;locus_tag=C9F09_09480;product=DUF2500 domain-containing protein;protein_id=TGC94620.1;transl_table=11 PYKB01000636.1 Genbank gene 3996 4268 . - . ID=gene-C9F09_09485;Name=C9F09_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09485 PYKB01000636.1 Protein Homology CDS 3996 4268 . - 0 ID=cds-TGC94621.1;Parent=gene-C9F09_09485;Dbxref=NCBI_GP:TGC94621.1;Name=TGC94621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462474.3;locus_tag=C9F09_09485;product=hypothetical protein;protein_id=TGC94621.1;transl_table=11 PYKB01000636.1 Genbank gene 4255 4851 . - . ID=gene-C9F09_09490;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=C9F09_09490 PYKB01000636.1 Protein Homology CDS 4255 4851 . - 0 ID=cds-TGC94622.1;Parent=gene-C9F09_09490;Dbxref=NCBI_GP:TGC94622.1;Name=TGC94622.1;Note=catalyzes the methylation of 16S rRNA at position G966;gbkey=CDS;gene=rsmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=C9F09_09490;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=TGC94622.1;transl_table=11 PYKB01000636.1 Genbank gene 4977 6452 . + . ID=gene-C9F09_09495;Name=C9F09_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09495 PYKB01000636.1 Protein Homology CDS 4977 6452 . + 0 ID=cds-TGC94623.1;Parent=gene-C9F09_09495;Dbxref=NCBI_GP:TGC94623.1;Name=TGC94623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=C9F09_09495;product=signal recognition particle-docking protein FtsY;protein_id=TGC94623.1;transl_table=11 PYKB01000636.1 Genbank gene 6455 7123 . + . ID=gene-C9F09_09500;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=C9F09_09500 PYKB01000636.1 Protein Homology CDS 6455 7123 . + 0 ID=cds-TGC94624.1;Parent=gene-C9F09_09500;Dbxref=NCBI_GP:TGC94624.1;Name=TGC94624.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458351.1;locus_tag=C9F09_09500;product=cell division ATP-binding protein FtsE;protein_id=TGC94624.1;transl_table=11 PYKB01000636.1 Genbank gene 7116 8171 . + . ID=gene-C9F09_09505;Name=C9F09_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09505 PYKB01000636.1 Protein Homology CDS 7116 8171 . + 0 ID=cds-TGC94625.1;Parent=gene-C9F09_09505;Dbxref=NCBI_GP:TGC94625.1;Name=TGC94625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=C9F09_09505;product=cell division protein FtsX;protein_id=TGC94625.1;transl_table=11 PYKB01000636.1 Genbank gene 8417 9271 . + . ID=gene-C9F09_09510;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=C9F09_09510 PYKB01000636.1 Protein Homology CDS 8417 9271 . + 0 ID=cds-TGC94626.1;Parent=gene-C9F09_09510;Dbxref=NCBI_GP:TGC94626.1;Name=TGC94626.1;gbkey=CDS;gene=rpoH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458353.1;locus_tag=C9F09_09510;product=RNA polymerase sigma factor RpoH;protein_id=TGC94626.1;transl_table=11 PYKB01000636.1 Genbank gene 9599 10696 . + . ID=gene-C9F09_09515;Name=C9F09_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09515 PYKB01000636.1 Protein Homology CDS 9599 10696 . + 0 ID=cds-TGC94627.1;Parent=gene-C9F09_09515;Dbxref=NCBI_GP:TGC94627.1;Name=TGC94627.1;Note=with LivFGHM is involved in the high affinity leucine transport;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462468.1;locus_tag=C9F09_09515;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=TGC94627.1;transl_table=11 PYKB01000636.1 Genbank gene 10780 10914 . - . ID=gene-C9F09_09520;Name=C9F09_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09520 PYKB01000636.1 Protein Homology CDS 10780 10914 . - 0 ID=cds-TGC94628.1;Parent=gene-C9F09_09520;Dbxref=NCBI_GP:TGC94628.1;Name=TGC94628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=C9F09_09520;product=hypothetical protein;protein_id=TGC94628.1;transl_table=11 PYKB01000636.1 Genbank gene 10892 11275 . - . ID=gene-C9F09_09525;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=C9F09_09525 PYKB01000636.1 Protein Homology CDS 10892 11275 . - 0 ID=cds-TGC94629.1;Parent=gene-C9F09_09525;Dbxref=NCBI_GP:TGC94629.1;Name=TGC94629.1;gbkey=CDS;gene=panM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458355.1;locus_tag=C9F09_09525;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=TGC94629.1;transl_table=11 PYKB01000636.1 Genbank gene 11697 12806 . + . ID=gene-C9F09_09530;Name=livk;gbkey=Gene;gene=livk;gene_biotype=protein_coding;locus_tag=C9F09_09530 PYKB01000636.1 Protein Homology CDS 11697 12806 . + 0 ID=cds-TGC94630.1;Parent=gene-C9F09_09530;Dbxref=NCBI_GP:TGC94630.1;Name=TGC94630.1;gbkey=CDS;gene=livk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458356.1;locus_tag=C9F09_09530;product=branched chain amino acid ABC transporter substrate-binding protein;protein_id=TGC94630.1;transl_table=11 PYKB01000636.1 Genbank gene 12866 13310 . + . ID=gene-C9F09_09535;Name=C9F09_09535;end_range=13310,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09535;partial=true PYKB01000636.1 Protein Homology CDS 12866 13310 . + 0 ID=cds-TGC94631.1;Parent=gene-C9F09_09535;Dbxref=NCBI_GP:TGC94631.1;Name=TGC94631.1;Note=LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter;end_range=13310,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=C9F09_09535;partial=true;product=branched-chain amino acid ABC transporter permease LivH;protein_id=TGC94631.1;transl_table=11 ##sequence-region PYKB01001177.1 1 26323 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001177.1 Genbank region 1 26323 . + . ID=PYKB01001177.1:1..26323;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001177.1 Genbank pseudogene 64 387 . + . ID=gene-C9F09_19845;Name=C9F09_19845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_19845;pseudo=true PYKB01001177.1 Protein Homology CDS 64 387 . + 0 ID=cds-C9F09_19845;Parent=gene-C9F09_19845;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=C9F09_19845;product=Nif3-like dinuclear metal center protein;pseudo=true;transl_table=11 PYKB01001177.1 Genbank gene 403 1059 . + . ID=gene-C9F09_19850;Name=C9F09_19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19850 PYKB01001177.1 Protein Homology CDS 403 1059 . + 0 ID=cds-TGC84126.1;Parent=gene-C9F09_19850;Dbxref=NCBI_GP:TGC84126.1;Name=TGC84126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=C9F09_19850;product=hypothetical protein;protein_id=TGC84126.1;transl_table=11 PYKB01001177.1 Genbank gene 1053 1985 . + . ID=gene-C9F09_19855;Name=C9F09_19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19855 PYKB01001177.1 Protein Homology CDS 1053 1985 . + 0 ID=cds-TGC84127.1;Parent=gene-C9F09_19855;Dbxref=NCBI_GP:TGC84127.1;Name=TGC84127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=C9F09_19855;product=hypothetical protein;protein_id=TGC84127.1;transl_table=11 PYKB01001177.1 Genbank gene 1975 2709 . + . ID=gene-C9F09_19860;Name=C9F09_19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19860 PYKB01001177.1 Protein Homology CDS 1975 2709 . + 0 ID=cds-TGC84128.1;Parent=gene-C9F09_19860;Dbxref=NCBI_GP:TGC84128.1;Name=TGC84128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455273.1;locus_tag=C9F09_19860;product=LamB/YcsF family protein;protein_id=TGC84128.1;transl_table=11 PYKB01001177.1 Genbank gene 3033 3164 . + . ID=gene-C9F09_19865;Name=C9F09_19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19865 PYKB01001177.1 Protein Homology CDS 3033 3164 . + 0 ID=cds-TGC84129.1;Parent=gene-C9F09_19865;Dbxref=NCBI_GP:TGC84129.1;Name=TGC84129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459700.1;locus_tag=C9F09_19865;product=hypothetical protein;protein_id=TGC84129.1;transl_table=11 PYKB01001177.1 Genbank gene 3224 3790 . + . ID=gene-C9F09_19870;Name=C9F09_19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19870 PYKB01001177.1 Protein Homology CDS 3224 3790 . + 0 ID=cds-TGC84130.1;Parent=gene-C9F09_19870;Dbxref=NCBI_GP:TGC84130.1;Name=TGC84130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455275.1;locus_tag=C9F09_19870;product=DNA recombinase;protein_id=TGC84130.1;transl_table=11 PYKB01001177.1 Genbank gene 3968 4303 . + . ID=gene-C9F09_19875;Name=C9F09_19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19875 PYKB01001177.1 Protein Homology CDS 3968 4303 . + 0 ID=cds-TGC84131.1;Parent=gene-C9F09_19875;Dbxref=NCBI_GP:TGC84131.1;Name=TGC84131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459702.1;locus_tag=C9F09_19875;product=hypothetical protein;protein_id=TGC84131.1;transl_table=11 PYKB01001177.1 Genbank gene 4305 5045 . + . ID=gene-C9F09_19880;Name=C9F09_19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19880 PYKB01001177.1 Protein Homology CDS 4305 5045 . + 0 ID=cds-TGC84132.1;Parent=gene-C9F09_19880;Dbxref=NCBI_GP:TGC84132.1;Name=TGC84132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455277.1;locus_tag=C9F09_19880;product=transport protein;protein_id=TGC84132.1;transl_table=11 PYKB01001177.1 Genbank gene 5331 6482 . + . ID=gene-C9F09_19885;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=C9F09_19885 PYKB01001177.1 Protein Homology CDS 5331 6482 . + 0 ID=cds-TGC84133.1;Parent=gene-C9F09_19885;Dbxref=NCBI_GP:TGC84133.1;Name=TGC84133.1;gbkey=CDS;gene=glf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459704.1;locus_tag=C9F09_19885;product=UDP-galactopyranose mutase;protein_id=TGC84133.1;transl_table=11 PYKB01001177.1 Genbank gene 6482 7375 . + . ID=gene-C9F09_19890;Name=C9F09_19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19890 PYKB01001177.1 Protein Homology CDS 6482 7375 . + 0 ID=cds-TGC84134.1;Parent=gene-C9F09_19890;Dbxref=NCBI_GP:TGC84134.1;Name=TGC84134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455279.1;locus_tag=C9F09_19890;product=glycosyltransferase family 2 protein;protein_id=TGC84134.1;transl_table=11 PYKB01001177.1 Genbank gene 7388 8521 . + . ID=gene-C9F09_19895;Name=C9F09_19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19895 PYKB01001177.1 Protein Homology CDS 7388 8521 . + 0 ID=cds-TGC84135.1;Parent=gene-C9F09_19895;Dbxref=NCBI_GP:TGC84135.1;Name=TGC84135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455280.1;locus_tag=C9F09_19895;product=glycosyltransferase family 1 protein;protein_id=TGC84135.1;transl_table=11 PYKB01001177.1 Genbank gene 8650 9420 . + . ID=gene-C9F09_19900;Name=C9F09_19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19900 PYKB01001177.1 Protein Homology CDS 8650 9420 . + 0 ID=cds-TGC84136.1;Parent=gene-C9F09_19900;Dbxref=NCBI_GP:TGC84136.1;Name=TGC84136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459707.1;locus_tag=C9F09_19900;product=ABC transporter permease;protein_id=TGC84136.1;transl_table=11 PYKB01001177.1 Genbank gene 9424 10134 . + . ID=gene-C9F09_19905;Name=C9F09_19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19905 PYKB01001177.1 Protein Homology CDS 9424 10134 . + 0 ID=cds-TGC84137.1;Parent=gene-C9F09_19905;Dbxref=NCBI_GP:TGC84137.1;Name=TGC84137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459708.1;locus_tag=C9F09_19905;product=sugar ABC transporter ATP-binding protein;protein_id=TGC84137.1;transl_table=11 PYKB01001177.1 Genbank pseudogene 10228 12017 . + . ID=gene-C9F09_19910;Name=C9F09_19910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_19910;pseudo=true PYKB01001177.1 Protein Homology CDS 10228 12017 . + 0 ID=cds-C9F09_19910;Parent=gene-C9F09_19910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459709.1;locus_tag=C9F09_19910;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 PYKB01001177.1 Genbank gene 12210 13043 . + . ID=gene-C9F09_19915;Name=C9F09_19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19915 PYKB01001177.1 Protein Homology CDS 12210 13043 . + 0 ID=cds-TGC84138.1;Parent=gene-C9F09_19915;Dbxref=NCBI_GP:TGC84138.1;Name=TGC84138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459710.1;locus_tag=C9F09_19915;product=glycosyltransferase family 2 protein;protein_id=TGC84138.1;transl_table=11 PYKB01001177.1 Genbank gene 13101 14996 . + . ID=gene-C9F09_19920;Name=C9F09_19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19920 PYKB01001177.1 Protein Homology CDS 13101 14996 . + 0 ID=cds-TGC84147.1;Parent=gene-C9F09_19920;Dbxref=NCBI_GP:TGC84147.1;Name=TGC84147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459711.1;locus_tag=C9F09_19920;product=glycosyl transferase;protein_id=TGC84147.1;transl_table=11 PYKB01001177.1 Genbank gene 15064 15201 . + . ID=gene-C9F09_19925;Name=C9F09_19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19925 PYKB01001177.1 Protein Homology CDS 15064 15201 . + 0 ID=cds-TGC84139.1;Parent=gene-C9F09_19925;Dbxref=NCBI_GP:TGC84139.1;Name=TGC84139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459712.1;locus_tag=C9F09_19925;product=hypothetical protein;protein_id=TGC84139.1;transl_table=11 PYKB01001177.1 Genbank gene 15250 16041 . + . ID=gene-C9F09_19930;Name=C9F09_19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19930 PYKB01001177.1 Protein Homology CDS 15250 16041 . + 0 ID=cds-TGC84140.1;Parent=gene-C9F09_19930;Dbxref=NCBI_GP:TGC84140.1;Name=TGC84140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=C9F09_19930;product=endonuclease VIII;protein_id=TGC84140.1;transl_table=11 PYKB01001177.1 Genbank gene 16096 17142 . - . ID=gene-C9F09_19935;Name=C9F09_19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19935 PYKB01001177.1 Protein Homology CDS 16096 17142 . - 0 ID=cds-TGC84141.1;Parent=gene-C9F09_19935;Dbxref=NCBI_GP:TGC84141.1;Name=TGC84141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455285.1;locus_tag=C9F09_19935;product=AbrB family transcriptional regulator;protein_id=TGC84141.1;transl_table=11 PYKB01001177.1 Genbank gene 17278 18561 . - . ID=gene-C9F09_19940;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=C9F09_19940 PYKB01001177.1 Protein Homology CDS 17278 18561 . - 0 ID=cds-TGC84142.1;Parent=gene-C9F09_19940;Dbxref=NCBI_GP:TGC84142.1;Name=TGC84142.1;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;gbkey=CDS;gene=gltA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455286.1;locus_tag=C9F09_19940;product=citrate (Si)-synthase;protein_id=TGC84142.1;transl_table=11 PYKB01001177.1 Genbank gene 18521 18907 . + . ID=gene-C9F09_19945;Name=C9F09_19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19945 PYKB01001177.1 Protein Homology CDS 18521 18907 . + 0 ID=cds-TGC84143.1;Parent=gene-C9F09_19945;Dbxref=NCBI_GP:TGC84143.1;Name=TGC84143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459716.1;locus_tag=C9F09_19945;product=hypothetical protein;protein_id=TGC84143.1;transl_table=11 PYKB01001177.1 Genbank pseudogene 19042 19230 . - . ID=gene-C9F09_19950;Name=C9F09_19950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_19950;pseudo=true PYKB01001177.1 Protein Homology CDS 19042 19230 . - 0 ID=cds-C9F09_19950;Parent=gene-C9F09_19950;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308495.1;locus_tag=C9F09_19950;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001177.1 Genbank gene 19316 19705 . + . ID=gene-C9F09_19955;Name=C9F09_19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19955 PYKB01001177.1 Protein Homology CDS 19316 19705 . + 0 ID=cds-TGC84148.1;Parent=gene-C9F09_19955;Dbxref=NCBI_GP:TGC84148.1;Name=TGC84148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455288.1;locus_tag=C9F09_19955;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=TGC84148.1;transl_table=11 PYKB01001177.1 Genbank gene 19699 20046 . + . ID=gene-C9F09_19960;Name=C9F09_19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19960 PYKB01001177.1 Protein Homology CDS 19699 20046 . + 0 ID=cds-TGC84144.1;Parent=gene-C9F09_19960;Dbxref=NCBI_GP:TGC84144.1;Name=TGC84144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=C9F09_19960;product=succinate dehydrogenase membrane anchor subunit;protein_id=TGC84144.1;transl_table=11 PYKB01001177.1 Genbank gene 20046 21812 . + . ID=gene-C9F09_19965;Name=C9F09_19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19965 PYKB01001177.1 Protein Homology CDS 20046 21812 . + 0 ID=cds-TGC84145.1;Parent=gene-C9F09_19965;Dbxref=NCBI_GP:TGC84145.1;Name=TGC84145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459719.1;locus_tag=C9F09_19965;product=succinate dehydrogenase flavoprotein subunit;protein_id=TGC84145.1;transl_table=11 PYKB01001177.1 Genbank pseudogene 21829 22545 . + . ID=gene-C9F09_19970;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=pseudogene;locus_tag=C9F09_19970;pseudo=true PYKB01001177.1 Protein Homology CDS 21829 22545 . + 0 ID=cds-C9F09_19970;Parent=gene-C9F09_19970;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase%3B internal stop;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=C9F09_19970;product=succinate dehydrogenase iron-sulfur subunit;pseudo=true;transl_table=11 PYKB01001177.1 Genbank gene 23069 25870 . + . ID=gene-C9F09_19975;Name=C9F09_19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19975 PYKB01001177.1 Protein Homology CDS 23069 25870 . + 0 ID=cds-TGC84146.1;Parent=gene-C9F09_19975;Dbxref=NCBI_GP:TGC84146.1;Name=TGC84146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455292.1;locus_tag=C9F09_19975;product=2-oxoglutarate dehydrogenase E1 component;protein_id=TGC84146.1;transl_table=11 PYKB01001177.1 Genbank pseudogene 25885 26292 . + . ID=gene-C9F09_19980;Name=C9F09_19980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_19980;pseudo=true PYKB01001177.1 Protein Homology CDS 25885 26292 . + 0 ID=cds-C9F09_19980;Parent=gene-C9F09_19980;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455293.1;locus_tag=C9F09_19980;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000856.1 1 5988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000856.1 Genbank region 1 5988 . + . ID=PYKB01000856.1:1..5988;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000856.1 Genbank pseudogene 70 837 . + . ID=gene-C9F09_13630;Name=C9F09_13630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13630;pseudo=true PYKB01000856.1 Protein Homology CDS 70 837 . + 0 ID=cds-C9F09_13630;Parent=gene-C9F09_13630;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311977.1;locus_tag=C9F09_13630;product=RNA polymerase sigma factor RpoD;pseudo=true;transl_table=11 PYKB01000856.1 Genbank gene 961 1467 . - . ID=gene-C9F09_13635;Name=C9F09_13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13635 PYKB01000856.1 Protein Homology CDS 961 1467 . - 0 ID=cds-TGC91136.1;Parent=gene-C9F09_13635;Dbxref=NCBI_GP:TGC91136.1;Name=TGC91136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457603.1;locus_tag=C9F09_13635;product=G/U mismatch-specific DNA glycosylase;protein_id=TGC91136.1;transl_table=11 PYKB01000856.1 Genbank gene 1593 1668 . + . ID=gene-C9F09_13640;Name=C9F09_13640;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_13640 PYKB01000856.1 tRNAscan-SE tRNA 1593 1668 . + . ID=rna-C9F09_13640;Parent=gene-C9F09_13640;anticodon=(pos:1626..1628);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_13640;product=tRNA-Met PYKB01000856.1 tRNAscan-SE exon 1593 1668 . + . ID=exon-C9F09_13640-1;Parent=rna-C9F09_13640;anticodon=(pos:1626..1628);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_13640;product=tRNA-Met PYKB01000856.1 Genbank gene 1748 2515 . - . ID=gene-C9F09_13645;Name=C9F09_13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13645 PYKB01000856.1 Protein Homology CDS 1748 2515 . - 0 ID=cds-TGC91137.1;Parent=gene-C9F09_13645;Dbxref=NCBI_GP:TGC91137.1;Name=TGC91137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457604.1;locus_tag=C9F09_13645;product=NADPH-dependent ferric siderophore reductase;protein_id=TGC91137.1;transl_table=11 PYKB01000856.1 Genbank gene 2747 3415 . + . ID=gene-C9F09_13650;Name=C9F09_13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13650 PYKB01000856.1 Protein Homology CDS 2747 3415 . + 0 ID=cds-TGC91138.1;Parent=gene-C9F09_13650;Dbxref=NCBI_GP:TGC91138.1;Name=TGC91138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=C9F09_13650;product=PadR family transcriptional regulator;protein_id=TGC91138.1;transl_table=11 PYKB01000856.1 Genbank gene 3412 4977 . - . ID=gene-C9F09_13655;Name=C9F09_13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13655 PYKB01000856.1 Protein Homology CDS 3412 4977 . - 0 ID=cds-TGC91139.1;Parent=gene-C9F09_13655;Dbxref=NCBI_GP:TGC91139.1;Name=TGC91139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=C9F09_13655;product=methyl-accepting chemotaxis protein;protein_id=TGC91139.1;transl_table=11 PYKB01000856.1 Genbank pseudogene 5365 5919 . - . ID=gene-C9F09_13660;Name=C9F09_13660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13660;pseudo=true PYKB01000856.1 Protein Homology CDS 5365 5919 . - 0 ID=cds-C9F09_13660;Parent=gene-C9F09_13660;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457607.1;locus_tag=C9F09_13660;product=aerotaxis receptor;pseudo=true;transl_table=11 ##sequence-region PYKB01001338.1 1 5985 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001338.1 Genbank region 1 5985 . + . ID=PYKB01001338.1:1..5985;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001338.1 Genbank pseudogene 62 892 . - . ID=gene-C9F09_22980;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=pseudogene;locus_tag=C9F09_22980;pseudo=true PYKB01001338.1 Protein Homology CDS 62 892 . - 0 ID=cds-C9F09_22980;Parent=gene-C9F09_22980;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=glgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=C9F09_22980;product=starch synthase;pseudo=true;transl_table=11 PYKB01001338.1 Genbank gene 892 2187 . - . ID=gene-C9F09_22985;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=C9F09_22985 PYKB01001338.1 Protein Homology CDS 892 2187 . - 0 ID=cds-TGC80767.1;Parent=gene-C9F09_22985;Dbxref=NCBI_GP:TGC80767.1;Name=TGC80767.1;gbkey=CDS;gene=glgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=C9F09_22985;product=glucose-1-phosphate adenylyltransferase;protein_id=TGC80767.1;transl_table=11 PYKB01001338.1 Genbank gene 2202 4178 . - . ID=gene-C9F09_22990;Name=C9F09_22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22990 PYKB01001338.1 Protein Homology CDS 2202 4178 . - 0 ID=cds-TGC80768.1;Parent=gene-C9F09_22990;Dbxref=NCBI_GP:TGC80768.1;Name=TGC80768.1;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=C9F09_22990;product=glycogen debranching enzyme;protein_id=TGC80768.1;transl_table=11 PYKB01001338.1 Genbank gene 4175 5985 . - . ID=gene-C9F09_22995;Name=C9F09_22995;end_range=5985,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22995;partial=true PYKB01001338.1 Protein Homology CDS 4175 5985 . - 2 ID=cds-TGC80769.1;Parent=gene-C9F09_22995;Dbxref=NCBI_GP:TGC80769.1;Name=TGC80769.1;end_range=5985,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458380.1;locus_tag=C9F09_22995;partial=true;product=1%2C4-alpha-glucan branching enzyme;protein_id=TGC80769.1;transl_table=11 ##sequence-region PYKB01000407.1 1 5981 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000407.1 Genbank region 1 5981 . + . ID=PYKB01000407.1:1..5981;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000407.1 Genbank gene 1 1141 . + . ID=gene-C9F09_04620;Name=C9F09_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04620;partial=true;start_range=.,1 PYKB01000407.1 Protein Homology CDS 1 1141 . + 1 ID=cds-TGC99487.1;Parent=gene-C9F09_04620;Dbxref=NCBI_GP:TGC99487.1;Name=TGC99487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=C9F09_04620;partial=true;product=C4-dicarboxylate ABC transporter;protein_id=TGC99487.1;start_range=.,1;transl_table=11 PYKB01000407.1 Genbank gene 1328 1816 . + . ID=gene-C9F09_04625;Name=C9F09_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04625 PYKB01000407.1 Protein Homology CDS 1328 1816 . + 0 ID=cds-TGC99488.1;Parent=gene-C9F09_04625;Dbxref=NCBI_GP:TGC99488.1;Name=TGC99488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=C9F09_04625;product=ArgR family transcriptional regulator;protein_id=TGC99488.1;transl_table=11 PYKB01000407.1 Genbank gene 1786 1926 . - . ID=gene-C9F09_04630;Name=C9F09_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04630 PYKB01000407.1 Protein Homology CDS 1786 1926 . - 0 ID=cds-TGC99489.1;Parent=gene-C9F09_04630;Dbxref=NCBI_GP:TGC99489.1;Name=TGC99489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=C9F09_04630;product=hypothetical protein;protein_id=TGC99489.1;transl_table=11 PYKB01000407.1 Genbank gene 1906 2007 . + . ID=gene-C9F09_04635;Name=C9F09_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04635 PYKB01000407.1 Protein Homology CDS 1906 2007 . + 0 ID=cds-TGC99490.1;Parent=gene-C9F09_04635;Dbxref=NCBI_GP:TGC99490.1;Name=TGC99490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458879.1;locus_tag=C9F09_04635;product=pyrBI operon leader peptide;protein_id=TGC99490.1;transl_table=11 PYKB01000407.1 Genbank gene 2043 2978 . + . ID=gene-C9F09_04640;Name=C9F09_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04640 PYKB01000407.1 Protein Homology CDS 2043 2978 . + 0 ID=cds-TGC99491.1;Parent=gene-C9F09_04640;Dbxref=NCBI_GP:TGC99491.1;Name=TGC99491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458878.1;locus_tag=C9F09_04640;product=aspartate carbamoyltransferase;protein_id=TGC99491.1;transl_table=11 PYKB01000407.1 Genbank gene 2991 3452 . + . ID=gene-C9F09_04645;Name=C9F09_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04645 PYKB01000407.1 Protein Homology CDS 2991 3452 . + 0 ID=cds-TGC99492.1;Parent=gene-C9F09_04645;Dbxref=NCBI_GP:TGC99492.1;Name=TGC99492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=C9F09_04645;product=aspartate carbamoyltransferase regulatory subunit;protein_id=TGC99492.1;transl_table=11 PYKB01000407.1 Genbank gene 3529 3915 . + . ID=gene-C9F09_04650;Name=C9F09_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04650 PYKB01000407.1 Protein Homology CDS 3529 3915 . + 0 ID=cds-TGC99493.1;Parent=gene-C9F09_04650;Dbxref=NCBI_GP:TGC99493.1;Name=TGC99493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458876.1;locus_tag=C9F09_04650;product=reactive intermediate/imine deaminase;protein_id=TGC99493.1;transl_table=11 PYKB01000407.1 Genbank gene 4004 5981 . - . ID=gene-C9F09_04655;Name=mgtA;end_range=5981,.;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=C9F09_04655;partial=true PYKB01000407.1 Protein Homology CDS 4004 5981 . - 1 ID=cds-TGC99494.1;Parent=gene-C9F09_04655;Dbxref=NCBI_GP:TGC99494.1;Name=TGC99494.1;end_range=5981,.;gbkey=CDS;gene=mgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458874.1;locus_tag=C9F09_04655;partial=true;product=magnesium-translocating P-type ATPase;protein_id=TGC99494.1;transl_table=11 ##sequence-region PYKB01000791.1 1 5980 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000791.1 Genbank region 1 5980 . + . ID=PYKB01000791.1:1..5980;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000791.1 Genbank gene 1 203 . - . ID=gene-C9F09_12270;Name=C9F09_12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12270;partial=true;start_range=.,1 PYKB01000791.1 Protein Homology CDS 1 203 . - 0 ID=cds-TGC92306.1;Parent=gene-C9F09_12270;Dbxref=NCBI_GP:TGC92306.1;Name=TGC92306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456853.1;locus_tag=C9F09_12270;partial=true;product=isochorismate synthase MenF;protein_id=TGC92306.1;start_range=.,1;transl_table=11 PYKB01000791.1 Genbank gene 304 609 . - . ID=gene-C9F09_12275;Name=C9F09_12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12275 PYKB01000791.1 Protein Homology CDS 304 609 . - 0 ID=cds-TGC92307.1;Parent=gene-C9F09_12275;Dbxref=NCBI_GP:TGC92307.1;Name=TGC92307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=C9F09_12275;product=DUF883 domain-containing protein;protein_id=TGC92307.1;transl_table=11 PYKB01000791.1 Genbank gene 664 1125 . - . ID=gene-C9F09_12280;Name=C9F09_12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12280 PYKB01000791.1 Protein Homology CDS 664 1125 . - 0 ID=cds-TGC92308.1;Parent=gene-C9F09_12280;Dbxref=NCBI_GP:TGC92308.1;Name=TGC92308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456855.1;locus_tag=C9F09_12280;product=GNAT family N-acetyltransferase;protein_id=TGC92308.1;transl_table=11 PYKB01000791.1 Genbank gene 1186 2103 . + . ID=gene-C9F09_12285;Name=C9F09_12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12285 PYKB01000791.1 Protein Homology CDS 1186 2103 . + 0 ID=cds-TGC92309.1;Parent=gene-C9F09_12285;Dbxref=NCBI_GP:TGC92309.1;Name=TGC92309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456856.1;locus_tag=C9F09_12285;product=ribonuclease Z;protein_id=TGC92309.1;transl_table=11 PYKB01000791.1 Genbank gene 2169 3170 . + . ID=gene-C9F09_12290;Name=C9F09_12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12290 PYKB01000791.1 Protein Homology CDS 2169 3170 . + 0 ID=cds-TGC92310.1;Parent=gene-C9F09_12290;Dbxref=NCBI_GP:TGC92310.1;Name=TGC92310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461256.1;locus_tag=C9F09_12290;product=chemotaxis protein CheV;protein_id=TGC92310.1;transl_table=11 PYKB01000791.1 Genbank gene 3211 4992 . - . ID=gene-C9F09_12295;Name=C9F09_12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12295 PYKB01000791.1 Protein Homology CDS 3211 4992 . - 0 ID=cds-TGC92311.1;Parent=gene-C9F09_12295;Dbxref=NCBI_GP:TGC92311.1;Name=TGC92311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461257.1;locus_tag=C9F09_12295;product=hypothetical protein;protein_id=TGC92311.1;transl_table=11 PYKB01000791.1 Genbank gene 5711 5980 . - . ID=gene-C9F09_12300;Name=C9F09_12300;end_range=5980,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12300;partial=true PYKB01000791.1 Protein Homology CDS 5711 5980 . - 0 ID=cds-TGC92312.1;Parent=gene-C9F09_12300;Dbxref=NCBI_GP:TGC92312.1;Name=TGC92312.1;end_range=5980,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442111.1;locus_tag=C9F09_12300;partial=true;product=histidine kinase;protein_id=TGC92312.1;transl_table=11 ##sequence-region PYKB01000691.1 1 5965 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000691.1 Genbank region 1 5965 . + . ID=PYKB01000691.1:1..5965;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000691.1 Genbank gene 1 197 . + . ID=gene-C9F09_10475;Name=C9F09_10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10475;partial=true;start_range=.,1 PYKB01000691.1 Protein Homology CDS 1 197 . + 2 ID=cds-TGC93837.1;Parent=gene-C9F09_10475;Dbxref=NCBI_GP:TGC93837.1;Name=TGC93837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456959.1;locus_tag=C9F09_10475;partial=true;product=purine-nucleoside phosphorylase;protein_id=TGC93837.1;start_range=.,1;transl_table=11 PYKB01000691.1 Genbank gene 252 1508 . + . ID=gene-C9F09_10480;Name=C9F09_10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10480 PYKB01000691.1 Protein Homology CDS 252 1508 . + 0 ID=cds-TGC93838.1;Parent=gene-C9F09_10480;Dbxref=NCBI_GP:TGC93838.1;Name=TGC93838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=C9F09_10480;product=nucleoside permease;protein_id=TGC93838.1;transl_table=11 PYKB01000691.1 Genbank gene 1567 1725 . + . ID=gene-C9F09_10485;Name=C9F09_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10485 PYKB01000691.1 Protein Homology CDS 1567 1725 . + 0 ID=cds-TGC93839.1;Parent=gene-C9F09_10485;Dbxref=NCBI_GP:TGC93839.1;Name=TGC93839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991992.1;locus_tag=C9F09_10485;product=xapX domain protein;protein_id=TGC93839.1;transl_table=11 PYKB01000691.1 Genbank gene 1777 2661 . + . ID=gene-C9F09_10490;Name=C9F09_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10490 PYKB01000691.1 Protein Homology CDS 1777 2661 . + 0 ID=cds-TGC93840.1;Parent=gene-C9F09_10490;Dbxref=NCBI_GP:TGC93840.1;Name=TGC93840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=C9F09_10490;product=LysR family transcriptional regulator;protein_id=TGC93840.1;transl_table=11 PYKB01000691.1 Genbank gene 2853 2986 . - . ID=gene-C9F09_10495;Name=C9F09_10495;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F09_10495 PYKB01000691.1 cmsearch ncRNA 2853 2986 . - . ID=rna-C9F09_10495;Parent=gene-C9F09_10495;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_10495;product=RtT sRNA PYKB01000691.1 cmsearch exon 2853 2986 . - . ID=exon-C9F09_10495-1;Parent=rna-C9F09_10495;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_10495;product=RtT sRNA PYKB01000691.1 Genbank gene 3009 3084 . - . ID=gene-C9F09_10500;Name=C9F09_10500;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_10500 PYKB01000691.1 tRNAscan-SE tRNA 3009 3084 . - . ID=rna-C9F09_10500;Parent=gene-C9F09_10500;anticodon=(pos:complement(3049..3051));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_10500;product=tRNA-Lys PYKB01000691.1 tRNAscan-SE exon 3009 3084 . - . ID=exon-C9F09_10500-1;Parent=rna-C9F09_10500;anticodon=(pos:complement(3049..3051));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_10500;product=tRNA-Lys PYKB01000691.1 Genbank gene 3088 3163 . - . ID=gene-C9F09_10505;Name=C9F09_10505;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_10505 PYKB01000691.1 tRNAscan-SE tRNA 3088 3163 . - . ID=rna-C9F09_10505;Parent=gene-C9F09_10505;anticodon=(pos:complement(3128..3130));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_10505;product=tRNA-Val PYKB01000691.1 tRNAscan-SE exon 3088 3163 . - . ID=exon-C9F09_10505-1;Parent=rna-C9F09_10505;anticodon=(pos:complement(3128..3130));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_10505;product=tRNA-Val PYKB01000691.1 Genbank gene 3422 4837 . + . ID=gene-C9F09_10510;Name=C9F09_10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10510 PYKB01000691.1 Protein Homology CDS 3422 4837 . + 0 ID=cds-TGC93841.1;Parent=gene-C9F09_10510;Dbxref=NCBI_GP:TGC93841.1;Name=TGC93841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695624.1;locus_tag=C9F09_10510;product=glutamate--tRNA ligase;protein_id=TGC93841.1;transl_table=11 PYKB01000691.1 Genbank gene 4891 5283 . - . ID=gene-C9F09_10515;Name=C9F09_10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10515 PYKB01000691.1 Protein Homology CDS 4891 5283 . - 0 ID=cds-TGC93842.1;Parent=gene-C9F09_10515;Dbxref=NCBI_GP:TGC93842.1;Name=TGC93842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456955.1;locus_tag=C9F09_10515;product=hypothetical protein;protein_id=TGC93842.1;transl_table=11 PYKB01000691.1 Genbank gene 5285 5647 . - . ID=gene-C9F09_10520;Name=C9F09_10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10520 PYKB01000691.1 Protein Homology CDS 5285 5647 . - 0 ID=cds-TGC93843.1;Parent=gene-C9F09_10520;Dbxref=NCBI_GP:TGC93843.1;Name=TGC93843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456954.1;locus_tag=C9F09_10520;product=hypothetical protein;protein_id=TGC93843.1;transl_table=11 PYKB01000691.1 Genbank gene 5667 5867 . + . ID=gene-C9F09_10525;Name=C9F09_10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10525 PYKB01000691.1 Protein Homology CDS 5667 5867 . + 0 ID=cds-TGC93844.1;Parent=gene-C9F09_10525;Dbxref=NCBI_GP:TGC93844.1;Name=TGC93844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001581460.1;locus_tag=C9F09_10525;product=hypothetical protein;protein_id=TGC93844.1;transl_table=11 PYKB01000691.1 Genbank gene 5869 5944 . + . ID=gene-C9F09_10530;Name=C9F09_10530;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_10530 PYKB01000691.1 tRNAscan-SE tRNA 5869 5944 . + . ID=rna-C9F09_10530;Parent=gene-C9F09_10530;anticodon=(pos:5902..5904);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_10530;product=tRNA-Ala PYKB01000691.1 tRNAscan-SE exon 5869 5944 . + . ID=exon-C9F09_10530-1;Parent=rna-C9F09_10530;anticodon=(pos:5902..5904);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_10530;product=tRNA-Ala ##sequence-region PYKB01001591.1 1 5939 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001591.1 Genbank region 1 5939 . + . ID=PYKB01001591.1:1..5939;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001591.1 Genbank gene 1 566 . - . ID=gene-C9F09_27955;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=C9F09_27955;partial=true;start_range=.,1 PYKB01001591.1 Protein Homology CDS 1 566 . - 0 ID=cds-TGC75059.1;Parent=gene-C9F09_27955;Dbxref=NCBI_GP:TGC75059.1;Name=TGC75059.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;gbkey=CDS;gene=hflB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457675.1;locus_tag=C9F09_27955;partial=true;product=ATP-dependent metalloprotease;protein_id=TGC75059.1;start_range=.,1;transl_table=11 PYKB01001591.1 Genbank gene 535 774 . + . ID=gene-C9F09_27960;Name=C9F09_27960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27960 PYKB01001591.1 Protein Homology CDS 535 774 . + 0 ID=cds-TGC75053.1;Parent=gene-C9F09_27960;Dbxref=NCBI_GP:TGC75053.1;Name=TGC75053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001323959.1;locus_tag=C9F09_27960;product=hypothetical protein;protein_id=TGC75053.1;transl_table=11 PYKB01001591.1 Genbank gene 670 1296 . - . ID=gene-C9F09_27965;Name=C9F09_27965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27965 PYKB01001591.1 Protein Homology CDS 670 1296 . - 0 ID=cds-TGC75054.1;Parent=gene-C9F09_27965;Dbxref=NCBI_GP:TGC75054.1;Name=TGC75054.1;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312085.1;locus_tag=C9F09_27965;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase;protein_id=TGC75054.1;transl_table=11 PYKB01001591.1 Genbank gene 1423 1716 . + . ID=gene-C9F09_27970;Name=C9F09_27970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27970 PYKB01001591.1 Protein Homology CDS 1423 1716 . + 0 ID=cds-TGC75060.1;Parent=gene-C9F09_27970;Dbxref=NCBI_GP:TGC75060.1;Name=TGC75060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=C9F09_27970;product=ribosome assembly RNA-binding protein YhbY;protein_id=TGC75060.1;transl_table=11 PYKB01001591.1 Genbank gene 1872 2348 . - . ID=gene-C9F09_27975;Name=C9F09_27975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27975 PYKB01001591.1 Protein Homology CDS 1872 2348 . - 0 ID=cds-TGC75055.1;Parent=gene-C9F09_27975;Dbxref=NCBI_GP:TGC75055.1;Name=TGC75055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=C9F09_27975;product=transcription elongation factor GreA;protein_id=TGC75055.1;transl_table=11 PYKB01001591.1 Genbank gene 2596 4029 . + . ID=gene-C9F09_27980;Name=C9F09_27980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27980 PYKB01001591.1 Protein Homology CDS 2596 4029 . + 0 ID=cds-TGC75056.1;Parent=gene-C9F09_27980;Dbxref=NCBI_GP:TGC75056.1;Name=TGC75056.1;Note=penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1;locus_tag=C9F09_27980;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=TGC75056.1;transl_table=11 PYKB01001591.1 Genbank gene 4160 5332 . - . ID=gene-C9F09_27985;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=C9F09_27985 PYKB01001591.1 Protein Homology CDS 4160 5332 . - 0 ID=cds-TGC75057.1;Parent=gene-C9F09_27985;Dbxref=NCBI_GP:TGC75057.1;Name=TGC75057.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=C9F09_27985;product=GTPase ObgE;protein_id=TGC75057.1;transl_table=11 PYKB01001591.1 Genbank gene 5348 5939 . - . ID=gene-C9F09_27990;Name=C9F09_27990;end_range=5939,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27990;partial=true PYKB01001591.1 Protein Homology CDS 5348 5939 . - 1 ID=cds-TGC75058.1;Parent=gene-C9F09_27990;Dbxref=NCBI_GP:TGC75058.1;Name=TGC75058.1;end_range=5939,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=C9F09_27990;partial=true;product=EamA family transporter;protein_id=TGC75058.1;transl_table=11 ##sequence-region PYKB01000367.1 1 5927 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000367.1 Genbank region 1 5927 . + . ID=PYKB01000367.1:1..5927;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000367.1 Genbank gene 1 403 . - . ID=gene-C9F09_04130;Name=C9F09_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04130;partial=true;start_range=.,1 PYKB01000367.1 Protein Homology CDS 1 403 . - 0 ID=cds-TGD00181.1;Parent=gene-C9F09_04130;Dbxref=NCBI_GP:TGD00181.1;Name=TGD00181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=C9F09_04130;partial=true;product=glycine/betaine ABC transporter;protein_id=TGD00181.1;start_range=.,1;transl_table=11 PYKB01000367.1 Genbank pseudogene 426 640 . - . ID=gene-C9F09_04135;Name=C9F09_04135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04135;pseudo=true PYKB01000367.1 Protein Homology CDS 426 640 . - 0 ID=cds-C9F09_04135;Parent=gene-C9F09_04135;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001327587.1;locus_tag=C9F09_04135;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000367.1 Genbank gene 758 1717 . - . ID=gene-C9F09_04140;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=C9F09_04140 PYKB01000367.1 Protein Homology CDS 758 1717 . - 0 ID=cds-TGD00182.1;Parent=gene-C9F09_04140;Dbxref=NCBI_GP:TGD00182.1;Name=TGD00182.1;gbkey=CDS;gene=nrdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457207.1;locus_tag=C9F09_04140;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=TGD00182.1;transl_table=11 PYKB01000367.1 Genbank gene 1728 3872 . - . ID=gene-C9F09_04145;Name=C9F09_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04145 PYKB01000367.1 Protein Homology CDS 1728 3872 . - 0 ID=cds-TGD00183.1;Parent=gene-C9F09_04145;Dbxref=NCBI_GP:TGD00183.1;Name=TGD00183.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461733.1;locus_tag=C9F09_04145;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=TGD00183.1;transl_table=11 PYKB01000367.1 Genbank gene 3845 4255 . - . ID=gene-C9F09_04150;Name=C9F09_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04150 PYKB01000367.1 Protein Homology CDS 3845 4255 . - 0 ID=cds-TGD00184.1;Parent=gene-C9F09_04150;Dbxref=NCBI_GP:TGD00184.1;Name=TGD00184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=C9F09_04150;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=TGD00184.1;transl_table=11 PYKB01000367.1 Genbank gene 4252 4497 . - . ID=gene-C9F09_04155;Name=C9F09_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04155 PYKB01000367.1 Protein Homology CDS 4252 4497 . - 0 ID=cds-TGD00185.1;Parent=gene-C9F09_04155;Dbxref=NCBI_GP:TGD00185.1;Name=TGD00185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=C9F09_04155;product=NrdH-redoxin;protein_id=TGD00185.1;transl_table=11 PYKB01000367.1 Genbank gene 4596 4772 . - . ID=gene-C9F09_04160;Name=C9F09_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04160 PYKB01000367.1 Protein Homology CDS 4596 4772 . - 0 ID=cds-TGD00186.1;Parent=gene-C9F09_04160;Dbxref=NCBI_GP:TGD00186.1;Name=TGD00186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457203.1;locus_tag=C9F09_04160;product=hypothetical protein;protein_id=TGD00186.1;transl_table=11 PYKB01000367.1 Genbank gene 4769 5200 . - . ID=gene-C9F09_04165;Name=C9F09_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04165 PYKB01000367.1 Protein Homology CDS 4769 5200 . - 0 ID=cds-TGD00187.1;Parent=gene-C9F09_04165;Dbxref=NCBI_GP:TGD00187.1;Name=TGD00187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=C9F09_04165;product=carboxymuconolactone decarboxylase family protein;protein_id=TGD00187.1;transl_table=11 PYKB01000367.1 Genbank gene 5289 5927 . + . ID=gene-C9F09_04170;Name=C9F09_04170;end_range=5927,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04170;partial=true PYKB01000367.1 Protein Homology CDS 5289 5927 . + 0 ID=cds-TGD00188.1;Parent=gene-C9F09_04170;Dbxref=NCBI_GP:TGD00188.1;Name=TGD00188.1;end_range=5927,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=C9F09_04170;partial=true;product=DNA-binding transcriptional regulator;protein_id=TGD00188.1;transl_table=11 ##sequence-region PYKB01001256.1 1 5910 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001256.1 Genbank region 1 5910 . + . ID=PYKB01001256.1:1..5910;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001256.1 Genbank gene 1 1289 . - . ID=gene-C9F09_21460;Name=C9F09_21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21460;partial=true;start_range=.,1 PYKB01001256.1 Protein Homology CDS 1 1289 . - 0 ID=cds-TGC82304.1;Parent=gene-C9F09_21460;Dbxref=NCBI_GP:TGC82304.1;Name=TGC82304.1;Note=multicopy suppressor of dominant negative ftsH mutations%3B putative acyl-CoA synthetase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=C9F09_21460;partial=true;product=acyl-CoA synthetase FdrA;protein_id=TGC82304.1;start_range=.,1;transl_table=11 PYKB01001256.1 Genbank gene 1605 2654 . + . ID=gene-C9F09_21465;Name=C9F09_21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21465 PYKB01001256.1 Protein Homology CDS 1605 2654 . + 0 ID=cds-TGC82305.1;Parent=gene-C9F09_21465;Dbxref=NCBI_GP:TGC82305.1;Name=TGC82305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455120.1;locus_tag=C9F09_21465;product=ureidoglycolate dehydrogenase;protein_id=TGC82305.1;transl_table=11 PYKB01001256.1 Genbank gene 2676 3911 . + . ID=gene-C9F09_21470;Name=C9F09_21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21470 PYKB01001256.1 Protein Homology CDS 2676 3911 . + 0 ID=cds-TGC82306.1;Parent=gene-C9F09_21470;Dbxref=NCBI_GP:TGC82306.1;Name=TGC82306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=C9F09_21470;product=allantoate amidohydrolase;protein_id=TGC82306.1;transl_table=11 PYKB01001256.1 Genbank gene 3922 4707 . + . ID=gene-C9F09_21475;Name=C9F09_21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21475 PYKB01001256.1 Protein Homology CDS 3922 4707 . + 0 ID=cds-TGC82307.1;Parent=gene-C9F09_21475;Dbxref=NCBI_GP:TGC82307.1;Name=TGC82307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455118.1;locus_tag=C9F09_21475;product=(S)-ureidoglycine aminohydrolase;protein_id=TGC82307.1;transl_table=11 PYKB01001256.1 Genbank gene 4787 5910 . - . ID=gene-C9F09_21480;Name=C9F09_21480;end_range=5910,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21480;partial=true PYKB01001256.1 Protein Homology CDS 4787 5910 . - 2 ID=cds-TGC82308.1;Parent=gene-C9F09_21480;Dbxref=NCBI_GP:TGC82308.1;Name=TGC82308.1;end_range=5910,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459520.1;locus_tag=C9F09_21480;partial=true;product=glycerate kinase;protein_id=TGC82308.1;transl_table=11 ##sequence-region PYKB01001735.1 1 5872 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001735.1 Genbank region 1 5872 . + . ID=PYKB01001735.1:1..5872;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001735.1 Genbank pseudogene 38 145 . - . ID=gene-C9F09_30385;Name=C9F09_30385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_30385;pseudo=true PYKB01001735.1 Protein Homology CDS 38 145 . - 0 ID=cds-C9F09_30385;Parent=gene-C9F09_30385;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461180.1;locus_tag=C9F09_30385;product=phage holin%2C lambda family;pseudo=true;transl_table=11 PYKB01001735.1 Genbank gene 442 1773 . + . ID=gene-C9F09_30390;Name=C9F09_30390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30390 PYKB01001735.1 Protein Homology CDS 442 1773 . + 0 ID=cds-TGC70973.1;Parent=gene-C9F09_30390;Dbxref=NCBI_GP:TGC70973.1;Name=TGC70973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461181.1;locus_tag=C9F09_30390;product=NTPase;protein_id=TGC70973.1;transl_table=11 PYKB01001735.1 Genbank gene 1802 2170 . - . ID=gene-C9F09_30395;Name=C9F09_30395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30395 PYKB01001735.1 Protein Homology CDS 1802 2170 . - 0 ID=cds-TGC70974.1;Parent=gene-C9F09_30395;Dbxref=NCBI_GP:TGC70974.1;Name=TGC70974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461182.1;locus_tag=C9F09_30395;product=antitermination protein Q;protein_id=TGC70974.1;transl_table=11 PYKB01001735.1 Genbank gene 2185 3174 . - . ID=gene-C9F09_30400;Name=C9F09_30400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30400 PYKB01001735.1 Protein Homology CDS 2185 3174 . - 0 ID=cds-TGC70978.1;Parent=gene-C9F09_30400;Dbxref=NCBI_GP:TGC70978.1;Name=TGC70978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461183.1;locus_tag=C9F09_30400;product=hypothetical protein;protein_id=TGC70978.1;transl_table=11 PYKB01001735.1 Genbank gene 3182 4042 . - . ID=gene-C9F09_30405;Name=C9F09_30405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30405 PYKB01001735.1 Protein Homology CDS 3182 4042 . - 0 ID=cds-TGC70975.1;Parent=gene-C9F09_30405;Dbxref=NCBI_GP:TGC70975.1;Name=TGC70975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061457.1;locus_tag=C9F09_30405;product=DNA-binding protein;protein_id=TGC70975.1;transl_table=11 PYKB01001735.1 Genbank gene 4059 4448 . - . ID=gene-C9F09_30410;Name=C9F09_30410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30410 PYKB01001735.1 Protein Homology CDS 4059 4448 . - 0 ID=cds-TGC70976.1;Parent=gene-C9F09_30410;Dbxref=NCBI_GP:TGC70976.1;Name=TGC70976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411629.1;locus_tag=C9F09_30410;product=hypothetical protein;protein_id=TGC70976.1;transl_table=11 PYKB01001735.1 Genbank gene 4445 5872 . - . ID=gene-C9F09_30415;Name=C9F09_30415;end_range=5872,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30415;partial=true PYKB01001735.1 Protein Homology CDS 4445 5872 . - 0 ID=cds-TGC70977.1;Parent=gene-C9F09_30415;Dbxref=NCBI_GP:TGC70977.1;Name=TGC70977.1;end_range=5872,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034738.1;locus_tag=C9F09_30415;partial=true;product=DNA cytosine methyltransferase;protein_id=TGC70977.1;transl_table=11 ##sequence-region PYKB01000012.1 1 5847 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000012.1 Genbank region 1 5847 . + . ID=PYKB01000012.1:1..5847;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000012.1 Genbank gene 1 814 . - . ID=gene-C9F09_00115;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=C9F09_00115;partial=true;start_range=.,1 PYKB01000012.1 Protein Homology CDS 1 814 . - 0 ID=cds-TGD07234.1;Parent=gene-C9F09_00115;Dbxref=NCBI_GP:TGD07234.1;Name=TGD07234.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458423.1;locus_tag=C9F09_00115;partial=true;product=tryptophan--tRNA ligase;protein_id=TGD07234.1;start_range=.,1;transl_table=11 PYKB01000012.1 Genbank gene 807 1565 . - . ID=gene-C9F09_00120;Name=C9F09_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00120 PYKB01000012.1 Protein Homology CDS 807 1565 . - 0 ID=cds-TGD07235.1;Parent=gene-C9F09_00120;Dbxref=NCBI_GP:TGD07235.1;Name=TGD07235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=C9F09_00120;product=phosphoglycolate phosphatase;protein_id=TGD07235.1;transl_table=11 PYKB01000012.1 Genbank gene 1558 2235 . - . ID=gene-C9F09_00125;Name=C9F09_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00125 PYKB01000012.1 Protein Homology CDS 1558 2235 . - 0 ID=cds-TGD07236.1;Parent=gene-C9F09_00125;Dbxref=NCBI_GP:TGD07236.1;Name=TGD07236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000816289.1;locus_tag=C9F09_00125;product=ribulose-phosphate 3-epimerase;protein_id=TGD07236.1;transl_table=11 PYKB01000012.1 Genbank gene 2253 3089 . - . ID=gene-C9F09_00130;Name=C9F09_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00130 PYKB01000012.1 Protein Homology CDS 2253 3089 . - 0 ID=cds-TGD07237.1;Parent=gene-C9F09_00130;Dbxref=NCBI_GP:TGD07237.1;Name=TGD07237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458420.1;locus_tag=C9F09_00130;product=adenine-specific DNA-methyltransferase;protein_id=TGD07237.1;transl_table=11 PYKB01000012.1 Genbank pseudogene 3270 4547 . - . ID=gene-C9F09_00135;Name=C9F09_00135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00135;pseudo=true PYKB01000012.1 Protein Homology CDS 3270 4547 . - 0 ID=cds-C9F09_00135;Parent=gene-C9F09_00135;Note=binds the septal ring%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=C9F09_00135;product=cell division protein DamX;pseudo=true;transl_table=11 PYKB01000012.1 Genbank gene 4645 5733 . - . ID=gene-C9F09_00140;Name=C9F09_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00140 PYKB01000012.1 Protein Homology CDS 4645 5733 . - 0 ID=cds-TGD07238.1;Parent=gene-C9F09_00140;Dbxref=NCBI_GP:TGD07238.1;Name=TGD07238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458418.1;locus_tag=C9F09_00140;product=3-dehydroquinate synthase;protein_id=TGD07238.1;transl_table=11 ##sequence-region PYKB01000243.1 1 13288 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000243.1 Genbank region 1 13288 . + . ID=PYKB01000243.1:1..13288;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000243.1 Genbank gene 1 1884 . - . ID=gene-C9F09_02620;Name=C9F09_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02620;partial=true;start_range=.,1 PYKB01000243.1 Protein Homology CDS 1 1884 . - 0 ID=cds-TGD02653.1;Parent=gene-C9F09_02620;Dbxref=NCBI_GP:TGD02653.1;Name=TGD02653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503215.1;locus_tag=C9F09_02620;partial=true;product=type IV secretion protein Rhs;protein_id=TGD02653.1;start_range=.,1;transl_table=11 PYKB01000243.1 Genbank gene 1900 2358 . - . ID=gene-C9F09_02625;Name=C9F09_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02625 PYKB01000243.1 Protein Homology CDS 1900 2358 . - 0 ID=cds-TGD02654.1;Parent=gene-C9F09_02625;Dbxref=NCBI_GP:TGD02654.1;Name=TGD02654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186512.1;locus_tag=C9F09_02625;product=DUF1795 domain-containing protein;protein_id=TGD02654.1;transl_table=11 PYKB01000243.1 Genbank gene 2418 4652 . - . ID=gene-C9F09_02630;Name=C9F09_02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02630 PYKB01000243.1 Protein Homology CDS 2418 4652 . - 0 ID=cds-TGD02655.1;Parent=gene-C9F09_02630;Dbxref=NCBI_GP:TGD02655.1;Name=TGD02655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505545.1;locus_tag=C9F09_02630;product=type VI secretion system tip protein VgrG;protein_id=TGD02655.1;transl_table=11 PYKB01000243.1 Genbank gene 4698 4907 . - . ID=gene-C9F09_02635;Name=C9F09_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02635 PYKB01000243.1 Protein Homology CDS 4698 4907 . - 0 ID=cds-TGD02656.1;Parent=gene-C9F09_02635;Dbxref=NCBI_GP:TGD02656.1;Name=TGD02656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751266.1;locus_tag=C9F09_02635;product=hypothetical protein;protein_id=TGD02656.1;transl_table=11 PYKB01000243.1 Genbank gene 5049 5570 . - . ID=gene-C9F09_02640;Name=C9F09_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02640 PYKB01000243.1 Protein Homology CDS 5049 5570 . - 0 ID=cds-TGD02657.1;Parent=gene-C9F09_02640;Dbxref=NCBI_GP:TGD02657.1;Name=TGD02657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459286.1;locus_tag=C9F09_02640;product=DUF2778 domain-containing protein;protein_id=TGD02657.1;transl_table=11 PYKB01000243.1 Genbank gene 5594 6010 . - . ID=gene-C9F09_02645;Name=C9F09_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02645 PYKB01000243.1 Protein Homology CDS 5594 6010 . - 0 ID=cds-TGD02658.1;Parent=gene-C9F09_02645;Dbxref=NCBI_GP:TGD02658.1;Name=TGD02658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459285.1;locus_tag=C9F09_02645;product=DUF2195 domain-containing protein;protein_id=TGD02658.1;transl_table=11 PYKB01000243.1 Genbank gene 6137 6598 . - . ID=gene-C9F09_02650;Name=C9F09_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02650 PYKB01000243.1 Protein Homology CDS 6137 6598 . - 0 ID=cds-TGD02659.1;Parent=gene-C9F09_02650;Dbxref=NCBI_GP:TGD02659.1;Name=TGD02659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670388.1;locus_tag=C9F09_02650;product=hypothetical protein;protein_id=TGD02659.1;transl_table=11 PYKB01000243.1 Genbank gene 6583 7053 . - . ID=gene-C9F09_02655;Name=C9F09_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02655 PYKB01000243.1 Protein Homology CDS 6583 7053 . - 0 ID=cds-TGD02660.1;Parent=gene-C9F09_02655;Dbxref=NCBI_GP:TGD02660.1;Name=TGD02660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528842.1;locus_tag=C9F09_02655;product=hypothetical protein;protein_id=TGD02660.1;transl_table=11 PYKB01000243.1 Genbank gene 7096 7863 . - . ID=gene-C9F09_02660;Name=C9F09_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02660 PYKB01000243.1 Protein Homology CDS 7096 7863 . - 0 ID=cds-TGD02661.1;Parent=gene-C9F09_02660;Dbxref=NCBI_GP:TGD02661.1;Name=TGD02661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454888.1;locus_tag=C9F09_02660;product=cytoplasmic protein;protein_id=TGD02661.1;transl_table=11 PYKB01000243.1 Genbank gene 7863 11732 . - . ID=gene-C9F09_02665;Name=icmF;gbkey=Gene;gene=icmF;gene_biotype=protein_coding;locus_tag=C9F09_02665 PYKB01000243.1 Protein Homology CDS 7863 11732 . - 0 ID=cds-TGD02662.1;Parent=gene-C9F09_02665;Dbxref=NCBI_GP:TGD02662.1;Name=TGD02662.1;gbkey=CDS;gene=icmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=C9F09_02665;product=type VI secretion system membrane subunit TssM;protein_id=TGD02662.1;transl_table=11 PYKB01000243.1 Genbank gene 11766 12197 . - . ID=gene-C9F09_02670;Name=C9F09_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02670 PYKB01000243.1 Protein Homology CDS 11766 12197 . - 0 ID=cds-TGD02664.1;Parent=gene-C9F09_02670;Dbxref=NCBI_GP:TGD02664.1;Name=TGD02664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=C9F09_02670;product=Shiga toxin A subunit;protein_id=TGD02664.1;transl_table=11 PYKB01000243.1 Genbank gene 12400 13173 . - . ID=gene-C9F09_02675;Name=C9F09_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02675 PYKB01000243.1 Protein Homology CDS 12400 13173 . - 0 ID=cds-TGD02663.1;Parent=gene-C9F09_02675;Dbxref=NCBI_GP:TGD02663.1;Name=TGD02663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=C9F09_02675;product=hypothetical protein;protein_id=TGD02663.1;transl_table=11 ##sequence-region PYKB01001725.1 1 5846 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001725.1 Genbank region 1 5846 . + . ID=PYKB01001725.1:1..5846;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001725.1 Genbank gene 1 478 . + . ID=gene-C9F09_30235;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=C9F09_30235;partial=true;start_range=.,1 PYKB01001725.1 Protein Homology CDS 1 478 . + 1 ID=cds-TGC71315.1;Parent=gene-C9F09_30235;Dbxref=NCBI_GP:TGC71315.1;Name=TGC71315.1;Note=catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine;gbkey=CDS;gene=panC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=C9F09_30235;partial=true;product=pantoate--beta-alanine ligase;protein_id=TGC71315.1;start_range=.,1;transl_table=11 PYKB01001725.1 Genbank gene 573 953 . + . ID=gene-C9F09_30240;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=C9F09_30240 PYKB01001725.1 Protein Homology CDS 573 953 . + 0 ID=cds-TGC71316.1;Parent=gene-C9F09_30240;Dbxref=NCBI_GP:TGC71316.1;Name=TGC71316.1;gbkey=CDS;gene=panD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=C9F09_30240;product=aspartate 1-decarboxylase;protein_id=TGC71316.1;transl_table=11 PYKB01001725.1 Genbank gene 960 2189 . - . ID=gene-C9F09_30245;Name=C9F09_30245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30245 PYKB01001725.1 Protein Homology CDS 960 2189 . - 0 ID=cds-TGC71317.1;Parent=gene-C9F09_30245;Dbxref=NCBI_GP:TGC71317.1;Name=TGC71317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=C9F09_30245;product=hypothetical protein;protein_id=TGC71317.1;transl_table=11 PYKB01001725.1 Genbank gene 2251 2691 . - . ID=gene-C9F09_30250;Name=C9F09_30250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30250 PYKB01001725.1 Protein Homology CDS 2251 2691 . - 0 ID=cds-TGC71318.1;Parent=gene-C9F09_30250;Dbxref=NCBI_GP:TGC71318.1;Name=TGC71318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=C9F09_30250;product=PTS sugar transporter subunit IIA;protein_id=TGC71318.1;transl_table=11 PYKB01001725.1 Genbank gene 3061 3600 . + . ID=gene-C9F09_30255;Name=C9F09_30255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30255 PYKB01001725.1 Protein Homology CDS 3061 3600 . + 0 ID=cds-TGC71319.1;Parent=gene-C9F09_30255;Dbxref=NCBI_GP:TGC71319.1;Name=TGC71319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=C9F09_30255;product=fimbrial protein StiA;protein_id=TGC71319.1;transl_table=11 PYKB01001725.1 Genbank gene 3648 4331 . + . ID=gene-C9F09_30260;Name=C9F09_30260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30260 PYKB01001725.1 Protein Homology CDS 3648 4331 . + 0 ID=cds-TGC71320.1;Parent=gene-C9F09_30260;Dbxref=NCBI_GP:TGC71320.1;Name=TGC71320.1;Note=binds with fimbrial subunit LpfA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=C9F09_30260;product=long polar fimbrial chaperone LpfB;protein_id=TGC71320.1;transl_table=11 PYKB01001725.1 Genbank gene 4358 5846 . + . ID=gene-C9F09_30265;Name=C9F09_30265;end_range=5846,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30265;partial=true PYKB01001725.1 Protein Homology CDS 4358 5846 . + 0 ID=cds-TGC71321.1;Parent=gene-C9F09_30265;Dbxref=NCBI_GP:TGC71321.1;Name=TGC71321.1;end_range=5846,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=C9F09_30265;partial=true;product=fimbrial assembly protein;protein_id=TGC71321.1;transl_table=11 ##sequence-region PYKB01000619.1 1 5836 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000619.1 Genbank region 1 5836 . + . ID=PYKB01000619.1:1..5836;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000619.1 Genbank gene 66 305 . + . ID=gene-C9F09_09165;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=C9F09_09165 PYKB01000619.1 Protein Homology CDS 66 305 . + 0 ID=cds-TGC94944.1;Parent=gene-C9F09_09165;Dbxref=NCBI_GP:TGC94944.1;Name=TGC94944.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456274.1;locus_tag=C9F09_09165;product=virulence protein MsgA;protein_id=TGC94944.1;transl_table=11 PYKB01000619.1 Genbank gene 210 443 . - . ID=gene-C9F09_09170;Name=C9F09_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09170 PYKB01000619.1 Protein Homology CDS 210 443 . - 0 ID=cds-TGC94945.1;Parent=gene-C9F09_09170;Dbxref=NCBI_GP:TGC94945.1;Name=TGC94945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612254.1;locus_tag=C9F09_09170;product=hypothetical protein;protein_id=TGC94945.1;transl_table=11 PYKB01000619.1 Genbank gene 795 1583 . + . ID=gene-C9F09_09175;Name=C9F09_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09175 PYKB01000619.1 Protein Homology CDS 795 1583 . + 0 ID=cds-TGC94946.1;Parent=gene-C9F09_09175;Dbxref=NCBI_GP:TGC94946.1;Name=TGC94946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=C9F09_09175;product=lipoprotein EnvF;protein_id=TGC94946.1;transl_table=11 PYKB01000619.1 Genbank gene 1905 2117 . + . ID=gene-C9F09_09180;Name=C9F09_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09180 PYKB01000619.1 Protein Homology CDS 1905 2117 . + 0 ID=cds-TGC94947.1;Parent=gene-C9F09_09180;Dbxref=NCBI_GP:TGC94947.1;Name=TGC94947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787627.1;locus_tag=C9F09_09180;product=hypothetical protein;protein_id=TGC94947.1;transl_table=11 PYKB01000619.1 Genbank pseudogene 2299 2373 . + . ID=gene-C9F09_09185;Name=C9F09_09185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_09185;pseudo=true PYKB01000619.1 Protein Homology CDS 2299 2373 . + 0 ID=cds-C9F09_09185;Parent=gene-C9F09_09185;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461632.1;locus_tag=C9F09_09185;product=phage tail protein;pseudo=true;transl_table=11 PYKB01000619.1 Genbank gene 2771 2965 . + . ID=gene-C9F09_09190;Name=C9F09_09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09190 PYKB01000619.1 Protein Homology CDS 2771 2965 . + 0 ID=cds-TGC94950.1;Parent=gene-C9F09_09190;Dbxref=NCBI_GP:TGC94950.1;Name=TGC94950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016058308.1;locus_tag=C9F09_09190;product=hypothetical protein;protein_id=TGC94950.1;transl_table=11 PYKB01000619.1 Genbank gene 2894 3088 . - . ID=gene-C9F09_09195;Name=C9F09_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09195 PYKB01000619.1 Protein Homology CDS 2894 3088 . - 0 ID=cds-TGC94951.1;Parent=gene-C9F09_09195;Dbxref=NCBI_GP:TGC94951.1;Name=TGC94951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669522.1;locus_tag=C9F09_09195;product=hypothetical protein;protein_id=TGC94951.1;transl_table=11 PYKB01000619.1 Genbank gene 3243 4367 . - . ID=gene-C9F09_09200;Name=C9F09_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09200 PYKB01000619.1 Protein Homology CDS 3243 4367 . - 0 ID=cds-TGC94948.1;Parent=gene-C9F09_09200;Dbxref=NCBI_GP:TGC94948.1;Name=TGC94948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456280.1;locus_tag=C9F09_09200;product=DUF3626 domain-containing protein;protein_id=TGC94948.1;transl_table=11 PYKB01000619.1 Genbank gene 4827 5836 . - . ID=gene-C9F09_09205;Name=C9F09_09205;end_range=5836,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09205;partial=true PYKB01000619.1 Protein Homology CDS 4827 5836 . - 2 ID=cds-TGC94949.1;Parent=gene-C9F09_09205;Dbxref=NCBI_GP:TGC94949.1;Name=TGC94949.1;Note=Converts isocitrate to alpha ketoglutarate;end_range=5836,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=C9F09_09205;partial=true;product=NADP-dependent isocitrate dehydrogenase;protein_id=TGC94949.1;transl_table=11 ##sequence-region PYKB01001131.1 1 5805 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001131.1 Genbank region 1 5805 . + . ID=PYKB01001131.1:1..5805;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001131.1 Genbank gene 1 426 . - . ID=gene-C9F09_19040;Name=C9F09_19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19040;partial=true;start_range=.,1 PYKB01001131.1 Protein Homology CDS 1 426 . - 0 ID=cds-TGC85242.1;Parent=gene-C9F09_19040;Dbxref=NCBI_GP:TGC85242.1;Name=TGC85242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034738.1;locus_tag=C9F09_19040;partial=true;product=DNA cytosine methyltransferase;protein_id=TGC85242.1;start_range=.,1;transl_table=11 PYKB01001131.1 Genbank gene 419 1297 . - . ID=gene-C9F09_19045;Name=C9F09_19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19045 PYKB01001131.1 Protein Homology CDS 419 1297 . - 0 ID=cds-TGC85243.1;Parent=gene-C9F09_19045;Dbxref=NCBI_GP:TGC85243.1;Name=TGC85243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762302.1;locus_tag=C9F09_19045;product=phage N-6-adenine-methyltransferase;protein_id=TGC85243.1;transl_table=11 PYKB01001131.1 Genbank gene 1297 1821 . - . ID=gene-C9F09_19050;Name=C9F09_19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19050 PYKB01001131.1 Protein Homology CDS 1297 1821 . - 0 ID=cds-TGC85244.1;Parent=gene-C9F09_19050;Dbxref=NCBI_GP:TGC85244.1;Name=TGC85244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000265005.1;locus_tag=C9F09_19050;product=PerC family transcriptional regulator;protein_id=TGC85244.1;transl_table=11 PYKB01001131.1 Genbank gene 1781 2710 . - . ID=gene-C9F09_19055;Name=C9F09_19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19055 PYKB01001131.1 Protein Homology CDS 1781 2710 . - 0 ID=cds-TGC85245.1;Parent=gene-C9F09_19055;Dbxref=NCBI_GP:TGC85245.1;Name=TGC85245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411626.1;locus_tag=C9F09_19055;product=helix-turn-helix domain-containing protein;protein_id=TGC85245.1;transl_table=11 PYKB01001131.1 Genbank gene 2707 2931 . - . ID=gene-C9F09_19060;Name=C9F09_19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19060 PYKB01001131.1 Protein Homology CDS 2707 2931 . - 0 ID=cds-TGC85246.1;Parent=gene-C9F09_19060;Dbxref=NCBI_GP:TGC85246.1;Name=TGC85246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401086.1;locus_tag=C9F09_19060;product=hypothetical protein;protein_id=TGC85246.1;transl_table=11 PYKB01001131.1 Genbank gene 2928 4085 . - . ID=gene-C9F09_19065;Name=C9F09_19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19065 PYKB01001131.1 Protein Homology CDS 2928 4085 . - 0 ID=cds-TGC85247.1;Parent=gene-C9F09_19065;Dbxref=NCBI_GP:TGC85247.1;Name=TGC85247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087402.1;locus_tag=C9F09_19065;product=peptidase;protein_id=TGC85247.1;transl_table=11 PYKB01001131.1 Genbank gene 4082 4636 . - . ID=gene-C9F09_19070;Name=C9F09_19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19070 PYKB01001131.1 Protein Homology CDS 4082 4636 . - 0 ID=cds-TGC85248.1;Parent=gene-C9F09_19070;Dbxref=NCBI_GP:TGC85248.1;Name=TGC85248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000515837.1;locus_tag=C9F09_19070;product=hypothetical protein;protein_id=TGC85248.1;transl_table=11 PYKB01001131.1 Genbank gene 4665 4889 . - . ID=gene-C9F09_19075;Name=C9F09_19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19075 PYKB01001131.1 Protein Homology CDS 4665 4889 . - 0 ID=cds-TGC85249.1;Parent=gene-C9F09_19075;Dbxref=NCBI_GP:TGC85249.1;Name=TGC85249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191959.1;locus_tag=C9F09_19075;product=XRE family transcriptional regulator;protein_id=TGC85249.1;transl_table=11 PYKB01001131.1 Genbank gene 4828 5013 . - . ID=gene-C9F09_19080;Name=C9F09_19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19080 PYKB01001131.1 Protein Homology CDS 4828 5013 . - 0 ID=cds-TGC85250.1;Parent=gene-C9F09_19080;Dbxref=NCBI_GP:TGC85250.1;Name=TGC85250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001347307.1;locus_tag=C9F09_19080;product=amino acid permease;protein_id=TGC85250.1;transl_table=11 PYKB01001131.1 Genbank gene 4987 5682 . + . ID=gene-C9F09_19085;Name=C9F09_19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19085 PYKB01001131.1 Protein Homology CDS 4987 5682 . + 0 ID=cds-TGC85251.1;Parent=gene-C9F09_19085;Dbxref=NCBI_GP:TGC85251.1;Name=TGC85251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411622.1;locus_tag=C9F09_19085;product=helix-turn-helix transcriptional regulator;protein_id=TGC85251.1;transl_table=11 ##sequence-region PYKB01001453.1 1 5784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001453.1 Genbank region 1 5784 . + . ID=PYKB01001453.1:1..5784;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001453.1 Genbank gene 1 658 . - . ID=gene-C9F09_25260;Name=C9F09_25260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25260;partial=true;start_range=.,1 PYKB01001453.1 Protein Homology CDS 1 658 . - 0 ID=cds-TGC78145.1;Parent=gene-C9F09_25260;Dbxref=NCBI_GP:TGC78145.1;Name=TGC78145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871810.1;locus_tag=C9F09_25260;partial=true;product=fimbrial assembly protein;protein_id=TGC78145.1;start_range=.,1;transl_table=11 PYKB01001453.1 Genbank gene 720 1253 . - . ID=gene-C9F09_25265;Name=C9F09_25265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25265 PYKB01001453.1 Protein Homology CDS 720 1253 . - 0 ID=cds-TGC78146.1;Parent=gene-C9F09_25265;Dbxref=NCBI_GP:TGC78146.1;Name=TGC78146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830679.1;locus_tag=C9F09_25265;product=fimbrial chaperone protein;protein_id=TGC78146.1;transl_table=11 PYKB01001453.1 Genbank gene 1532 1813 . - . ID=gene-C9F09_25270;Name=C9F09_25270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25270 PYKB01001453.1 Protein Homology CDS 1532 1813 . - 0 ID=cds-TGC78147.1;Parent=gene-C9F09_25270;Dbxref=NCBI_GP:TGC78147.1;Name=TGC78147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456712.1;locus_tag=C9F09_25270;product=DUF2574 domain-containing protein;protein_id=TGC78147.1;transl_table=11 PYKB01001453.1 Genbank gene 2091 3200 . - . ID=gene-C9F09_25275;Name=C9F09_25275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25275 PYKB01001453.1 Protein Homology CDS 2091 3200 . - 0 ID=cds-TGC78148.1;Parent=gene-C9F09_25275;Dbxref=NCBI_GP:TGC78148.1;Name=TGC78148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=C9F09_25275;product=iron-sulfur cluster carrier protein ApbC;protein_id=TGC78148.1;transl_table=11 PYKB01001453.1 Genbank gene 3365 5398 . + . ID=gene-C9F09_25280;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=C9F09_25280 PYKB01001453.1 Protein Homology CDS 3365 5398 . + 0 ID=cds-TGC78149.1;Parent=gene-C9F09_25280;Dbxref=NCBI_GP:TGC78149.1;Name=TGC78149.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=C9F09_25280;product=methionine--tRNA ligase;protein_id=TGC78149.1;transl_table=11 ##sequence-region PYKB01001717.1 1 5762 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001717.1 Genbank region 1 5762 . + . ID=PYKB01001717.1:1..5762;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001717.1 Genbank gene 1 1321 . + . ID=gene-C9F09_30055;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=C9F09_30055;partial=true;start_range=.,1 PYKB01001717.1 Protein Homology CDS 1 1321 . + 1 ID=cds-TGC71490.1;Parent=gene-C9F09_30055;Dbxref=NCBI_GP:TGC71490.1;Name=TGC71490.1;gbkey=CDS;gene=bcsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458296.1;locus_tag=C9F09_30055;partial=true;product=cellulose biosynthesis protein BcsG;protein_id=TGC71490.1;start_range=.,1;transl_table=11 PYKB01001717.1 Genbank gene 1403 1534 . - . ID=gene-C9F09_30060;Name=C9F09_30060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30060 PYKB01001717.1 Protein Homology CDS 1403 1534 . - 0 ID=cds-TGC71491.1;Parent=gene-C9F09_30060;Dbxref=NCBI_GP:TGC71491.1;Name=TGC71491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458295.1;locus_tag=C9F09_30060;product=small toxic polypeptide ldrD (Modular protein);protein_id=TGC71491.1;transl_table=11 PYKB01001717.1 Genbank pseudogene 1638 2035 . + . ID=gene-C9F09_30065;Name=C9F09_30065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_30065;pseudo=true PYKB01001717.1 Protein Homology CDS 1638 2035 . + 0 ID=cds-C9F09_30065;Parent=gene-C9F09_30065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133841.1;locus_tag=C9F09_30065;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001717.1 Genbank gene 2153 3451 . + . ID=gene-C9F09_30070;Name=C9F09_30070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30070 PYKB01001717.1 Protein Homology CDS 2153 3451 . + 0 ID=cds-TGC71492.1;Parent=gene-C9F09_30070;Dbxref=NCBI_GP:TGC71492.1;Name=TGC71492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=C9F09_30070;product=transporter;protein_id=TGC71492.1;transl_table=11 PYKB01001717.1 Genbank gene 3552 4565 . - . ID=gene-C9F09_30075;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=C9F09_30075 PYKB01001717.1 Protein Homology CDS 3552 4565 . - 0 ID=cds-TGC71493.1;Parent=gene-C9F09_30075;Dbxref=NCBI_GP:TGC71493.1;Name=TGC71493.1;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=C9F09_30075;product=dipeptide ABC transporter ATP-binding protein;protein_id=TGC71493.1;transl_table=11 PYKB01001717.1 Genbank gene 4562 5548 . - . ID=gene-C9F09_30080;Name=C9F09_30080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30080 PYKB01001717.1 Protein Homology CDS 4562 5548 . - 0 ID=cds-TGC71494.1;Parent=gene-C9F09_30080;Dbxref=NCBI_GP:TGC71494.1;Name=TGC71494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=C9F09_30080;product=dipeptide ABC transporter ATP-binding protein;protein_id=TGC71494.1;transl_table=11 PYKB01001717.1 Genbank pseudogene 5556 5762 . - . ID=gene-C9F09_30085;Name=C9F09_30085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_30085;pseudo=true PYKB01001717.1 Protein Homology CDS 5556 5762 . - 0 ID=cds-C9F09_30085;Parent=gene-C9F09_30085;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=C9F09_30085;product=dipeptide ABC transporter permease DppC;pseudo=true;transl_table=11 ##sequence-region PYKB01000437.1 1 5715 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000437.1 Genbank region 1 5715 . + . ID=PYKB01000437.1:1..5715;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000437.1 Genbank pseudogene 84 350 . - . ID=gene-C9F09_05280;Name=C9F09_05280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05280;pseudo=true PYKB01000437.1 Protein Homology CDS 84 350 . - 0 ID=cds-C9F09_05280;Parent=gene-C9F09_05280;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=C9F09_05280;product=thiol peroxidase;pseudo=true;transl_table=11 PYKB01000437.1 Genbank gene 466 1431 . + . ID=gene-C9F09_05285;Name=C9F09_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05285 PYKB01000437.1 Protein Homology CDS 466 1431 . + 0 ID=cds-TGC98865.1;Parent=gene-C9F09_05285;Dbxref=NCBI_GP:TGC98865.1;Name=TGC98865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=C9F09_05285;product=L-Ala-D/L-Glu epimerase;protein_id=TGC98865.1;transl_table=11 PYKB01000437.1 Genbank gene 1406 2134 . - . ID=gene-C9F09_05290;Name=C9F09_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05290 PYKB01000437.1 Protein Homology CDS 1406 2134 . - 0 ID=cds-TGC98866.1;Parent=gene-C9F09_05290;Dbxref=NCBI_GP:TGC98866.1;Name=TGC98866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=C9F09_05290;product=murein tripeptide amidase MpaA;protein_id=TGC98866.1;transl_table=11 PYKB01000437.1 Genbank gene 2324 3937 . + . ID=gene-C9F09_05295;Name=C9F09_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05295 PYKB01000437.1 Protein Homology CDS 2324 3937 . + 0 ID=cds-TGC98867.1;Parent=gene-C9F09_05295;Dbxref=NCBI_GP:TGC98867.1;Name=TGC98867.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=C9F09_05295;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=TGC98867.1;transl_table=11 PYKB01000437.1 Genbank gene 4157 4501 . - . ID=gene-C9F09_05300;Name=C9F09_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05300 PYKB01000437.1 Protein Homology CDS 4157 4501 . - 0 ID=cds-TGC98868.1;Parent=gene-C9F09_05300;Dbxref=NCBI_GP:TGC98868.1;Name=TGC98868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007712977.1;locus_tag=C9F09_05300;product=carboxymuconolactone decarboxylase family protein;protein_id=TGC98868.1;transl_table=11 PYKB01000437.1 Genbank gene 4536 4817 . - . ID=gene-C9F09_05305;Name=C9F09_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05305 PYKB01000437.1 Protein Homology CDS 4536 4817 . - 0 ID=cds-TGC98869.1;Parent=gene-C9F09_05305;Dbxref=NCBI_GP:TGC98869.1;Name=TGC98869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706353.1;locus_tag=C9F09_05305;product=hypothetical protein;protein_id=TGC98869.1;transl_table=11 PYKB01000437.1 Genbank pseudogene 5056 5160 . - . ID=gene-C9F09_05310;Name=C9F09_05310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05310;pseudo=true PYKB01000437.1 Protein Homology CDS 5056 5160 . - 0 ID=cds-C9F09_05310;Parent=gene-C9F09_05310;Note=binds to the twin-arginine signal peptides of certain proteins%2C including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000129294.1;locus_tag=C9F09_05310;product=Tat proofreading chaperone DmsD;pseudo=true;transl_table=11 PYKB01000437.1 Genbank pseudogene 5170 5658 . - . ID=gene-C9F09_05315;Name=C9F09_05315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05315;pseudo=true PYKB01000437.1 Protein Homology CDS 5170 5658 . - 0 ID=cds-C9F09_05315;Parent=gene-C9F09_05315;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257182.1;locus_tag=C9F09_05315;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKB01000399.1 1 5705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000399.1 Genbank region 1 5705 . + . ID=PYKB01000399.1:1..5705;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000399.1 Genbank gene 1 301 . + . ID=gene-C9F09_04440;Name=C9F09_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04440;partial=true;start_range=.,1 PYKB01000399.1 Protein Homology CDS 1 301 . + 1 ID=cds-TGC99670.1;Parent=gene-C9F09_04440;Dbxref=NCBI_GP:TGC99670.1;Name=TGC99670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457711.1;locus_tag=C9F09_04440;partial=true;product=DUF1016 domain-containing protein;protein_id=TGC99670.1;start_range=.,1;transl_table=11 PYKB01000399.1 Genbank gene 418 1671 . + . ID=gene-C9F09_04445;Name=C9F09_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04445 PYKB01000399.1 Protein Homology CDS 418 1671 . + 0 ID=cds-TGC99671.1;Parent=gene-C9F09_04445;Dbxref=NCBI_GP:TGC99671.1;Name=TGC99671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=C9F09_04445;product=cytosine permease;protein_id=TGC99671.1;transl_table=11 PYKB01000399.1 Genbank gene 1658 2938 . + . ID=gene-C9F09_04450;Name=C9F09_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04450 PYKB01000399.1 Protein Homology CDS 1658 2938 . + 0 ID=cds-TGC99672.1;Parent=gene-C9F09_04450;Dbxref=NCBI_GP:TGC99672.1;Name=TGC99672.1;Note=Catalyzes the deamination of cytosine to uracil and ammonia;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457713.1;locus_tag=C9F09_04450;product=cytosine deaminase;protein_id=TGC99672.1;transl_table=11 PYKB01000399.1 Genbank gene 3020 3487 . - . ID=gene-C9F09_04455;Name=C9F09_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04455 PYKB01000399.1 Protein Homology CDS 3020 3487 . - 0 ID=cds-TGC99673.1;Parent=gene-C9F09_04455;Dbxref=NCBI_GP:TGC99673.1;Name=TGC99673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457714.1;locus_tag=C9F09_04455;product=YhcH/YjgK/YiaL family protein;protein_id=TGC99673.1;transl_table=11 PYKB01000399.1 Genbank gene 3484 4359 . - . ID=gene-C9F09_04460;Name=C9F09_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04460 PYKB01000399.1 Protein Homology CDS 3484 4359 . - 0 ID=cds-TGC99674.1;Parent=gene-C9F09_04460;Dbxref=NCBI_GP:TGC99674.1;Name=TGC99674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=C9F09_04460;product=N-acetylmannosamine kinase;protein_id=TGC99674.1;transl_table=11 PYKB01000399.1 Genbank gene 4356 5045 . - . ID=gene-C9F09_04465;Name=C9F09_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04465 PYKB01000399.1 Protein Homology CDS 4356 5045 . - 0 ID=cds-TGC99675.1;Parent=gene-C9F09_04465;Dbxref=NCBI_GP:TGC99675.1;Name=TGC99675.1;Note=Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=C9F09_04465;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=TGC99675.1;transl_table=11 PYKB01000399.1 Genbank gene 5092 5705 . - . ID=gene-C9F09_04470;Name=C9F09_04470;end_range=5705,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04470;partial=true PYKB01000399.1 Protein Homology CDS 5092 5705 . - 2 ID=cds-TGC99676.1;Parent=gene-C9F09_04470;Dbxref=NCBI_GP:TGC99676.1;Name=TGC99676.1;end_range=5705,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457716.1;locus_tag=C9F09_04470;partial=true;product=MFS transporter;protein_id=TGC99676.1;transl_table=11 ##sequence-region PYKB01001081.1 1 5704 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001081.1 Genbank region 1 5704 . + . ID=PYKB01001081.1:1..5704;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001081.1 Genbank gene 1 467 . - . ID=gene-C9F09_18065;Name=C9F09_18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18065;partial=true;start_range=.,1 PYKB01001081.1 Protein Homology CDS 1 467 . - 0 ID=cds-TGC86412.1;Parent=gene-C9F09_18065;Dbxref=NCBI_GP:TGC86412.1;Name=TGC86412.1;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=C9F09_18065;partial=true;product=cell division protein FtsZ;protein_id=TGC86412.1;start_range=.,1;transl_table=11 PYKB01001081.1 Genbank pseudogene 528 1790 . - . ID=gene-C9F09_18070;Name=C9F09_18070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18070;pseudo=true PYKB01001081.1 Protein Homology CDS 528 1790 . - 0 ID=cds-C9F09_18070;Parent=gene-C9F09_18070;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454744.1;locus_tag=C9F09_18070;product=cell division protein FtsA;pseudo=true;transl_table=11 PYKB01001081.1 Genbank gene 1787 2617 . - . ID=gene-C9F09_18075;Name=C9F09_18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18075 PYKB01001081.1 Protein Homology CDS 1787 2617 . - 0 ID=cds-TGC86413.1;Parent=gene-C9F09_18075;Dbxref=NCBI_GP:TGC86413.1;Name=TGC86413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454743.1;locus_tag=C9F09_18075;product=cell division protein FtsQ;protein_id=TGC86413.1;transl_table=11 PYKB01001081.1 Genbank gene 2619 3539 . - . ID=gene-C9F09_18080;Name=ddl;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=C9F09_18080 PYKB01001081.1 Protein Homology CDS 2619 3539 . - 0 ID=cds-TGC86414.1;Parent=gene-C9F09_18080;Dbxref=NCBI_GP:TGC86414.1;Name=TGC86414.1;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;gbkey=CDS;gene=ddl;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454742.1;locus_tag=C9F09_18080;product=D-alanine--D-alanine ligase;protein_id=TGC86414.1;transl_table=11 PYKB01001081.1 Genbank gene 3532 5007 . - . ID=gene-C9F09_18085;Name=C9F09_18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18085 PYKB01001081.1 Protein Homology CDS 3532 5007 . - 0 ID=cds-TGC86415.1;Parent=gene-C9F09_18085;Dbxref=NCBI_GP:TGC86415.1;Name=TGC86415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454741.1;locus_tag=C9F09_18085;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=TGC86415.1;transl_table=11 PYKB01001081.1 Genbank gene 5126 5704 . - . ID=gene-C9F09_18090;Name=C9F09_18090;end_range=5704,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18090;partial=true PYKB01001081.1 Protein Homology CDS 5126 5704 . - 0 ID=cds-TGC86416.1;Parent=gene-C9F09_18090;Dbxref=NCBI_GP:TGC86416.1;Name=TGC86416.1;end_range=5704,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=C9F09_18090;partial=true;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=TGC86416.1;transl_table=11 ##sequence-region PYKB01001442.1 1 5649 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001442.1 Genbank region 1 5649 . + . ID=PYKB01001442.1:1..5649;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001442.1 Genbank gene 1 519 . + . ID=gene-C9F09_24990;Name=C9F09_24990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24990;partial=true;start_range=.,1 PYKB01001442.1 Protein Homology CDS 1 519 . + 0 ID=cds-TGC78428.1;Parent=gene-C9F09_24990;Dbxref=NCBI_GP:TGC78428.1;Name=TGC78428.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461478.1;locus_tag=C9F09_24990;partial=true;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=TGC78428.1;start_range=.,1;transl_table=11 PYKB01001442.1 Genbank gene 547 933 . + . ID=gene-C9F09_24995;Name=C9F09_24995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24995 PYKB01001442.1 Protein Homology CDS 547 933 . + 0 ID=cds-TGC78429.1;Parent=gene-C9F09_24995;Dbxref=NCBI_GP:TGC78429.1;Name=TGC78429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=C9F09_24995;product=iron-sulfur cluster scaffold-like protein;protein_id=TGC78429.1;transl_table=11 PYKB01001442.1 Genbank gene 962 1285 . + . ID=gene-C9F09_25000;Name=C9F09_25000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25000 PYKB01001442.1 Protein Homology CDS 962 1285 . + 0 ID=cds-TGC78430.1;Parent=gene-C9F09_25000;Dbxref=NCBI_GP:TGC78430.1;Name=TGC78430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457072.1;locus_tag=C9F09_25000;product=iron-sulfur cluster assembly accessory protein;protein_id=TGC78430.1;transl_table=11 PYKB01001442.1 Genbank gene 1481 1996 . + . ID=gene-C9F09_25005;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=C9F09_25005 PYKB01001442.1 Protein Homology CDS 1481 1996 . + 0 ID=cds-TGC78431.1;Parent=gene-C9F09_25005;Dbxref=NCBI_GP:TGC78431.1;Name=TGC78431.1;Note=J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins;gbkey=CDS;gene=hscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=C9F09_25005;product=co-chaperone protein HscB;protein_id=TGC78431.1;transl_table=11 PYKB01001442.1 Genbank gene 2009 3859 . + . ID=gene-C9F09_25010;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=C9F09_25010 PYKB01001442.1 Protein Homology CDS 2009 3859 . + 0 ID=cds-TGC78432.1;Parent=gene-C9F09_25010;Dbxref=NCBI_GP:TGC78432.1;Name=TGC78432.1;gbkey=CDS;gene=hscA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=C9F09_25010;product=Fe-S protein assembly chaperone HscA;protein_id=TGC78432.1;transl_table=11 PYKB01001442.1 Genbank gene 3861 4196 . + . ID=gene-C9F09_25015;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=C9F09_25015 PYKB01001442.1 Protein Homology CDS 3861 4196 . + 0 ID=cds-TGC78433.1;Parent=gene-C9F09_25015;Dbxref=NCBI_GP:TGC78433.1;Name=TGC78433.1;gbkey=CDS;gene=fdx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=C9F09_25015;product=ISC system 2Fe-2S type ferredoxin;protein_id=TGC78433.1;transl_table=11 PYKB01001442.1 Genbank gene 4208 4408 . + . ID=gene-C9F09_25020;Name=C9F09_25020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25020 PYKB01001442.1 Protein Homology CDS 4208 4408 . + 0 ID=cds-TGC78434.1;Parent=gene-C9F09_25020;Dbxref=NCBI_GP:TGC78434.1;Name=TGC78434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=C9F09_25020;product=Fe-S assembly protein IscX;protein_id=TGC78434.1;transl_table=11 PYKB01001442.1 Genbank gene 4462 5649 . + . ID=gene-C9F09_25025;Name=C9F09_25025;end_range=5649,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25025;partial=true PYKB01001442.1 Protein Homology CDS 4462 5649 . + 0 ID=cds-TGC78435.1;Parent=gene-C9F09_25025;Dbxref=NCBI_GP:TGC78435.1;Name=TGC78435.1;end_range=5649,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=C9F09_25025;partial=true;product=aminopeptidase PepB;protein_id=TGC78435.1;transl_table=11 ##sequence-region PYKB01001274.1 1 13183 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001274.1 Genbank region 1 13183 . + . ID=PYKB01001274.1:1..13183;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001274.1 Genbank gene 1 1945 . - . ID=gene-C9F09_21770;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=C9F09_21770;partial=true;start_range=.,1 PYKB01001274.1 Protein Homology CDS 1 1945 . - 0 ID=cds-TGC82177.1;Parent=gene-C9F09_21770;Dbxref=NCBI_GP:TGC82177.1;Name=TGC82177.1;gbkey=CDS;gene=uvrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458552.1;locus_tag=C9F09_21770;partial=true;product=excinuclease ABC subunit A;protein_id=TGC82177.1;start_range=.,1;transl_table=11 PYKB01001274.1 Genbank gene 1910 2026 . + . ID=gene-C9F09_21775;Name=C9F09_21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21775 PYKB01001274.1 Protein Homology CDS 1910 2026 . + 0 ID=cds-TGC82170.1;Parent=gene-C9F09_21775;Dbxref=NCBI_GP:TGC82170.1;Name=TGC82170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463120.1;locus_tag=C9F09_21775;product=hypothetical protein;protein_id=TGC82170.1;transl_table=11 PYKB01001274.1 Genbank gene 2193 2723 . + . ID=gene-C9F09_21780;Name=C9F09_21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21780 PYKB01001274.1 Protein Homology CDS 2193 2723 . + 0 ID=cds-TGC82171.1;Parent=gene-C9F09_21780;Dbxref=NCBI_GP:TGC82171.1;Name=TGC82171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458553.1;locus_tag=C9F09_21780;product=ssDNA-binding protein;protein_id=TGC82171.1;transl_table=11 PYKB01001274.1 Genbank gene 2739 2930 . - . ID=gene-C9F09_21785;Name=C9F09_21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21785 PYKB01001274.1 Protein Homology CDS 2739 2930 . - 0 ID=cds-TGC82172.1;Parent=gene-C9F09_21785;Dbxref=NCBI_GP:TGC82172.1;Name=TGC82172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001692031.1;locus_tag=C9F09_21785;product=hypothetical protein;protein_id=TGC82172.1;transl_table=11 PYKB01001274.1 Genbank gene 3763 4395 . + . ID=gene-C9F09_21790;Name=C9F09_21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21790 PYKB01001274.1 Protein Homology CDS 3763 4395 . + 0 ID=cds-TGC82173.1;Parent=gene-C9F09_21790;Dbxref=NCBI_GP:TGC82173.1;Name=TGC82173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=C9F09_21790;product=hypothetical protein;protein_id=TGC82173.1;transl_table=11 PYKB01001274.1 Genbank gene 4392 5780 . + . ID=gene-C9F09_21795;Name=C9F09_21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21795 PYKB01001274.1 Protein Homology CDS 4392 5780 . + 0 ID=cds-TGC82174.1;Parent=gene-C9F09_21795;Dbxref=NCBI_GP:TGC82174.1;Name=TGC82174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458555.1;locus_tag=C9F09_21795;product=hypothetical protein;protein_id=TGC82174.1;transl_table=11 PYKB01001274.1 Genbank gene 5770 7089 . + . ID=gene-C9F09_21800;Name=C9F09_21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21800 PYKB01001274.1 Protein Homology CDS 5770 7089 . + 0 ID=cds-TGC82175.1;Parent=gene-C9F09_21800;Dbxref=NCBI_GP:TGC82175.1;Name=TGC82175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=C9F09_21800;product=TolC family protein;protein_id=TGC82175.1;transl_table=11 PYKB01001274.1 Genbank gene 7086 8363 . + . ID=gene-C9F09_21805;Name=C9F09_21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21805 PYKB01001274.1 Protein Homology CDS 7086 8363 . + 0 ID=cds-TGC82176.1;Parent=gene-C9F09_21805;Dbxref=NCBI_GP:TGC82176.1;Name=TGC82176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=C9F09_21805;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=TGC82176.1;transl_table=11 PYKB01001274.1 Genbank pseudogene 8380 13089 . + . ID=gene-C9F09_21810;Name=C9F09_21810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21810;pseudo=true PYKB01001274.1 Protein Homology CDS 8380 13089 . + 0 ID=cds-C9F09_21810;Parent=gene-C9F09_21810;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9F09_21810;product=Ig-like domain repeat protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000927.1 1 5618 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000927.1 Genbank region 1 5618 . + . ID=PYKB01000927.1:1..5618;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000927.1 Genbank gene 1 204 . + . ID=gene-C9F09_15285;Name=C9F09_15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15285;partial=true;start_range=.,1 PYKB01000927.1 Protein Homology CDS 1 204 . + 0 ID=cds-TGC89746.1;Parent=gene-C9F09_15285;Dbxref=NCBI_GP:TGC89746.1;Name=TGC89746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457723.1;locus_tag=C9F09_15285;partial=true;product=cell division protein ZapE;protein_id=TGC89746.1;start_range=.,1;transl_table=11 PYKB01000927.1 Genbank gene 505 933 . + . ID=gene-C9F09_15290;Name=C9F09_15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15290 PYKB01000927.1 Protein Homology CDS 505 933 . + 0 ID=cds-TGC89747.1;Parent=gene-C9F09_15290;Dbxref=NCBI_GP:TGC89747.1;Name=TGC89747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312131.1;locus_tag=C9F09_15290;product=50S ribosomal protein L13;protein_id=TGC89747.1;transl_table=11 PYKB01000927.1 Genbank gene 949 1341 . + . ID=gene-C9F09_15295;Name=C9F09_15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15295 PYKB01000927.1 Protein Homology CDS 949 1341 . + 0 ID=cds-TGC89748.1;Parent=gene-C9F09_15295;Dbxref=NCBI_GP:TGC89748.1;Name=TGC89748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=C9F09_15295;product=30S ribosomal protein S9;protein_id=TGC89748.1;transl_table=11 PYKB01000927.1 Genbank gene 1654 2292 . + . ID=gene-C9F09_15300;Name=C9F09_15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15300 PYKB01000927.1 Protein Homology CDS 1654 2292 . + 0 ID=cds-TGC89749.1;Parent=gene-C9F09_15300;Dbxref=NCBI_GP:TGC89749.1;Name=TGC89749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=C9F09_15300;product=stringent starvation protein A;protein_id=TGC89749.1;transl_table=11 PYKB01000927.1 Genbank gene 2298 2798 . + . ID=gene-C9F09_15305;Name=C9F09_15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15305 PYKB01000927.1 Protein Homology CDS 2298 2798 . + 0 ID=cds-TGC89750.1;Parent=gene-C9F09_15305;Dbxref=NCBI_GP:TGC89750.1;Name=TGC89750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457719.1;locus_tag=C9F09_15305;product=ClpXP protease specificity-enhancing factor;protein_id=TGC89750.1;transl_table=11 PYKB01000927.1 Genbank gene 2907 3698 . + . ID=gene-C9F09_15310;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=C9F09_15310 PYKB01000927.1 Protein Homology CDS 2907 3698 . + 0 ID=cds-TGC89751.1;Parent=gene-C9F09_15310;Dbxref=NCBI_GP:TGC89751.1;Name=TGC89751.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457718.1;locus_tag=C9F09_15310;product=transcriptional regulator NanR;protein_id=TGC89751.1;transl_table=11 PYKB01000927.1 Genbank gene 3833 4726 . + . ID=gene-C9F09_15315;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=C9F09_15315 PYKB01000927.1 Protein Homology CDS 3833 4726 . + 0 ID=cds-TGC89752.1;Parent=gene-C9F09_15315;Dbxref=NCBI_GP:TGC89752.1;Name=TGC89752.1;gbkey=CDS;gene=nanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=C9F09_15315;product=N-acetylneuraminate lyase;protein_id=TGC89752.1;transl_table=11 PYKB01000927.1 Genbank gene 4842 5618 . + . ID=gene-C9F09_15320;Name=C9F09_15320;end_range=5618,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15320;partial=true PYKB01000927.1 Protein Homology CDS 4842 5618 . + 0 ID=cds-TGC89753.1;Parent=gene-C9F09_15320;Dbxref=NCBI_GP:TGC89753.1;Name=TGC89753.1;end_range=5618,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457716.1;locus_tag=C9F09_15320;partial=true;product=MFS transporter;protein_id=TGC89753.1;transl_table=11 ##sequence-region PYKB01000029.1 1 5573 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000029.1 Genbank region 1 5573 . + . ID=PYKB01000029.1:1..5573;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000029.1 Genbank pseudogene 55 762 . - . ID=gene-C9F09_00335;Name=C9F09_00335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00335;pseudo=true PYKB01000029.1 Protein Homology CDS 55 762 . - 0 ID=cds-C9F09_00335;Parent=gene-C9F09_00335;Note=reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=C9F09_00335;product=carbamate kinase;pseudo=true;transl_table=11 PYKB01000029.1 Genbank gene 773 1993 . - . ID=gene-C9F09_00340;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=C9F09_00340 PYKB01000029.1 Protein Homology CDS 773 1993 . - 0 ID=cds-TGD06838.1;Parent=gene-C9F09_00340;Dbxref=NCBI_GP:TGD06838.1;Name=TGD06838.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=C9F09_00340;product=arginine deiminase;protein_id=TGD06838.1;transl_table=11 PYKB01000029.1 Genbank gene 2094 2285 . + . ID=gene-C9F09_00345;Name=C9F09_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00345 PYKB01000029.1 Protein Homology CDS 2094 2285 . + 0 ID=cds-TGD06839.1;Parent=gene-C9F09_00345;Dbxref=NCBI_GP:TGD06839.1;Name=TGD06839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523634.1;locus_tag=C9F09_00345;product=hypothetical protein;protein_id=TGD06839.1;transl_table=11 PYKB01000029.1 Genbank gene 2504 2692 . - . ID=gene-C9F09_00350;Name=C9F09_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00350 PYKB01000029.1 Protein Homology CDS 2504 2692 . - 0 ID=cds-TGD06840.1;Parent=gene-C9F09_00350;Dbxref=NCBI_GP:TGD06840.1;Name=TGD06840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219560.1;locus_tag=C9F09_00350;product=hypothetical protein;protein_id=TGD06840.1;transl_table=11 PYKB01000029.1 Genbank gene 2669 3121 . + . ID=gene-C9F09_00355;Name=C9F09_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00355 PYKB01000029.1 Protein Homology CDS 2669 3121 . + 0 ID=cds-TGD06841.1;Parent=gene-C9F09_00355;Dbxref=NCBI_GP:TGD06841.1;Name=TGD06841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458885.1;locus_tag=C9F09_00355;product=YhcH/YjgK/YiaL family protein;protein_id=TGD06841.1;transl_table=11 PYKB01000029.1 Genbank gene 3195 4199 . - . ID=gene-C9F09_00360;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=C9F09_00360 PYKB01000029.1 Protein Homology CDS 3195 4199 . - 0 ID=cds-TGD06842.1;Parent=gene-C9F09_00360;Dbxref=NCBI_GP:TGD06842.1;Name=TGD06842.1;gbkey=CDS;gene=argF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=C9F09_00360;product=ornithine carbamoyltransferase;protein_id=TGD06842.1;transl_table=11 PYKB01000029.1 Genbank gene 4365 4781 . + . ID=gene-C9F09_00365;Name=C9F09_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00365 PYKB01000029.1 Protein Homology CDS 4365 4781 . + 0 ID=cds-TGD06843.1;Parent=gene-C9F09_00365;Dbxref=NCBI_GP:TGD06843.1;Name=TGD06843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458887.1;locus_tag=C9F09_00365;product=regulator of ribonuclease activity B;protein_id=TGD06843.1;transl_table=11 PYKB01000029.1 Genbank gene 4793 5573 . + . ID=gene-C9F09_00370;Name=miaE;end_range=5573,.;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=C9F09_00370;partial=true PYKB01000029.1 Protein Homology CDS 4793 5573 . + 0 ID=cds-TGD06844.1;Parent=gene-C9F09_00370;Dbxref=NCBI_GP:TGD06844.1;Name=TGD06844.1;end_range=5573,.;gbkey=CDS;gene=miaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=C9F09_00370;partial=true;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=TGD06844.1;transl_table=11 ##sequence-region PYKB01000915.1 1 5559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000915.1 Genbank region 1 5559 . + . ID=PYKB01000915.1:1..5559;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000915.1 Genbank gene 260 1456 . - . ID=gene-C9F09_15020;Name=C9F09_15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15020 PYKB01000915.1 Protein Homology CDS 260 1456 . - 0 ID=cds-TGC89892.1;Parent=gene-C9F09_15020;Dbxref=NCBI_GP:TGC89892.1;Name=TGC89892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=C9F09_15020;product=aminoacetone oxidase family FAD-binding enzyme;protein_id=TGC89892.1;transl_table=11 PYKB01000915.1 Genbank gene 1687 3183 . + . ID=gene-C9F09_15025;Name=C9F09_15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15025 PYKB01000915.1 Protein Homology CDS 1687 3183 . + 0 ID=cds-TGC89893.1;Parent=gene-C9F09_15025;Dbxref=NCBI_GP:TGC89893.1;Name=TGC89893.1;Note=involved in the transport of inorganic phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458328.1;locus_tag=C9F09_15025;product=inorganic phosphate transporter;protein_id=TGC89893.1;transl_table=11 PYKB01000915.1 Genbank gene 3324 3659 . - . ID=gene-C9F09_15030;Name=C9F09_15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15030 PYKB01000915.1 Protein Homology CDS 3324 3659 . - 0 ID=cds-TGC89894.1;Parent=gene-C9F09_15030;Dbxref=NCBI_GP:TGC89894.1;Name=TGC89894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458327.1;locus_tag=C9F09_15030;product=universal stress protein UspB;protein_id=TGC89894.1;transl_table=11 PYKB01000915.1 Genbank gene 4047 4475 . + . ID=gene-C9F09_15035;Name=C9F09_15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15035 PYKB01000915.1 Protein Homology CDS 4047 4475 . + 0 ID=cds-TGC89895.1;Parent=gene-C9F09_15035;Dbxref=NCBI_GP:TGC89895.1;Name=TGC89895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=C9F09_15035;product=universal stress protein UspA;protein_id=TGC89895.1;transl_table=11 PYKB01000915.1 Genbank pseudogene 4806 5510 . + . ID=gene-C9F09_15040;Name=tppB;gbkey=Gene;gene=tppB;gene_biotype=pseudogene;gene_synonym=ydgR;locus_tag=C9F09_15040;pseudo=true PYKB01000915.1 Protein Homology CDS 4806 5510 . + 0 ID=cds-C9F09_15040;Parent=gene-C9F09_15040;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=tppB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=C9F09_15040;product=dipeptide/tripeptide permease;pseudo=true;transl_table=11 ##sequence-region PYKB01000621.1 1 5555 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000621.1 Genbank region 1 5555 . + . ID=PYKB01000621.1:1..5555;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000621.1 Genbank pseudogene 40 1095 . - . ID=gene-C9F09_09215;Name=C9F09_09215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_09215;pseudo=true PYKB01000621.1 Protein Homology CDS 40 1095 . - 0 ID=cds-C9F09_09215;Parent=gene-C9F09_09215;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457934.1;locus_tag=C9F09_09215;product=Si-specific NAD(P)(+) transhydrogenase;pseudo=true;transl_table=11 PYKB01000621.1 Genbank gene 1104 1292 . - . ID=gene-C9F09_09220;Name=C9F09_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09220 PYKB01000621.1 Protein Homology CDS 1104 1292 . - 0 ID=cds-TGC94903.1;Parent=gene-C9F09_09220;Dbxref=NCBI_GP:TGC94903.1;Name=TGC94903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654329.1;locus_tag=C9F09_09220;product=hypothetical protein;protein_id=TGC94903.1;transl_table=11 PYKB01000621.1 Genbank gene 1294 1929 . + . ID=gene-C9F09_09225;Name=C9F09_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09225 PYKB01000621.1 Protein Homology CDS 1294 1929 . + 0 ID=cds-TGC94904.1;Parent=gene-C9F09_09225;Dbxref=NCBI_GP:TGC94904.1;Name=TGC94904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457933.1;locus_tag=C9F09_09225;product=HTH-type transcriptional repressor FabR;protein_id=TGC94904.1;transl_table=11 PYKB01000621.1 Genbank gene 1945 2304 . + . ID=gene-C9F09_09230;Name=C9F09_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09230 PYKB01000621.1 Protein Homology CDS 1945 2304 . + 0 ID=cds-TGC94905.1;Parent=gene-C9F09_09230;Dbxref=NCBI_GP:TGC94905.1;Name=TGC94905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457932.1;locus_tag=C9F09_09230;product=hypothetical protein;protein_id=TGC94905.1;transl_table=11 PYKB01000621.1 Genbank gene 2351 3451 . - . ID=gene-C9F09_09235;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=C9F09_09235 PYKB01000621.1 Protein Homology CDS 2351 3451 . - 0 ID=cds-TGC94906.1;Parent=gene-C9F09_09235;Dbxref=NCBI_GP:TGC94906.1;Name=TGC94906.1;gbkey=CDS;gene=trmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=C9F09_09235;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=TGC94906.1;transl_table=11 PYKB01000621.1 cmsearch riboswitch 3566 3759 . + . ID=id-PYKB01000621.1:3566..3759;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00174,COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PYKB01000621.1 Genbank gene 3825 5555 . + . ID=gene-C9F09_09240;Name=btuB;end_range=5555,.;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=C9F09_09240;partial=true PYKB01000621.1 Protein Homology CDS 3825 5555 . + 0 ID=cds-TGC94907.1;Parent=gene-C9F09_09240;Dbxref=NCBI_GP:TGC94907.1;Name=TGC94907.1;Note=involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space;end_range=5555,.;gbkey=CDS;gene=btuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457930.1;locus_tag=C9F09_09240;partial=true;product=vitamin B12/cobalamin outer membrane transporter;protein_id=TGC94907.1;transl_table=11 ##sequence-region PYKB01000893.1 1 5520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000893.1 Genbank region 1 5520 . + . ID=PYKB01000893.1:1..5520;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000893.1 Genbank gene 129 2834 . - . ID=gene-C9F09_14660;Name=C9F09_14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14660 PYKB01000893.1 Protein Homology CDS 129 2834 . - 0 ID=cds-TGC90357.1;Parent=gene-C9F09_14660;Dbxref=NCBI_GP:TGC90357.1;Name=TGC90357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=C9F09_14660;product=preprotein translocase subunit SecA;protein_id=TGC90357.1;transl_table=11 PYKB01000893.1 Genbank gene 2896 3420 . - . ID=gene-C9F09_14665;Name=C9F09_14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14665 PYKB01000893.1 Protein Homology CDS 2896 3420 . - 0 ID=cds-TGC90358.1;Parent=gene-C9F09_14665;Dbxref=NCBI_GP:TGC90358.1;Name=TGC90358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012599865.1;locus_tag=C9F09_14665;product=secA regulator SecM;protein_id=TGC90358.1;transl_table=11 PYKB01000893.1 Genbank gene 3671 4588 . - . ID=gene-C9F09_14670;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=C9F09_14670 PYKB01000893.1 Protein Homology CDS 3671 4588 . - 0 ID=cds-TGC90359.1;Parent=gene-C9F09_14670;Dbxref=NCBI_GP:TGC90359.1;Name=TGC90359.1;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis;gbkey=CDS;gene=lpxC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595491.1;locus_tag=C9F09_14670;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=TGC90359.1;transl_table=11 PYKB01000893.1 Genbank pseudogene 4689 5405 . - . ID=gene-C9F09_14675;Name=C9F09_14675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_14675;pseudo=true PYKB01000893.1 Protein Homology CDS 4689 5405 . - 0 ID=cds-C9F09_14675;Parent=gene-C9F09_14675;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=C9F09_14675;product=cell division protein FtsZ;pseudo=true;transl_table=11 ##sequence-region PYKB01000280.1 1 5517 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000280.1 Genbank region 1 5517 . + . ID=PYKB01000280.1:1..5517;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000280.1 Genbank gene 115 408 . - . ID=gene-C9F09_03180;Name=C9F09_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03180 PYKB01000280.1 Protein Homology CDS 115 408 . - 0 ID=cds-TGD01771.1;Parent=gene-C9F09_03180;Dbxref=NCBI_GP:TGD01771.1;Name=TGD01771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=C9F09_03180;product=ferredoxin family protein;protein_id=TGD01771.1;transl_table=11 PYKB01000280.1 Genbank gene 405 1691 . - . ID=gene-C9F09_03185;Name=C9F09_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03185 PYKB01000280.1 Protein Homology CDS 405 1691 . - 0 ID=cds-TGD01772.1;Parent=gene-C9F09_03185;Dbxref=NCBI_GP:TGD01772.1;Name=TGD01772.1;Note=FAD/NAD(P)-binding domain%3B possibly part of an electron transfer system required for anaerobic carnitine reduction;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=C9F09_03185;product=FAD-dependent oxidoreductase;protein_id=TGD01772.1;transl_table=11 PYKB01000280.1 Genbank gene 1748 2683 . - . ID=gene-C9F09_03190;Name=C9F09_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03190 PYKB01000280.1 Protein Homology CDS 1748 2683 . - 0 ID=cds-TGD01773.1;Parent=gene-C9F09_03190;Dbxref=NCBI_GP:TGD01773.1;Name=TGD01773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=C9F09_03190;product=electron transfer flavoprotein subunit alpha;protein_id=TGD01773.1;transl_table=11 PYKB01000280.1 Genbank gene 2705 3469 . - . ID=gene-C9F09_03195;Name=C9F09_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03195 PYKB01000280.1 Protein Homology CDS 2705 3469 . - 0 ID=cds-TGD01774.1;Parent=gene-C9F09_03195;Dbxref=NCBI_GP:TGD01774.1;Name=TGD01774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=C9F09_03195;product=electron transfer flavoprotein;protein_id=TGD01774.1;transl_table=11 PYKB01000280.1 Genbank gene 3932 4822 . + . ID=gene-C9F09_03200;Name=C9F09_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03200 PYKB01000280.1 Protein Homology CDS 3932 4822 . + 0 ID=cds-TGD01775.1;Parent=gene-C9F09_03200;Dbxref=NCBI_GP:TGD01775.1;Name=TGD01775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=C9F09_03200;product=AraC family transcriptional regulator;protein_id=TGD01775.1;transl_table=11 PYKB01000280.1 Genbank gene 4898 5517 . - . ID=gene-C9F09_03205;Name=C9F09_03205;end_range=5517,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03205;partial=true PYKB01000280.1 Protein Homology CDS 4898 5517 . - 2 ID=cds-TGD01776.1;Parent=gene-C9F09_03205;Dbxref=NCBI_GP:TGD01776.1;Name=TGD01776.1;end_range=5517,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=C9F09_03205;partial=true;product=acyl-CoA dehydrogenase;protein_id=TGD01776.1;transl_table=11 ##sequence-region PYKB01001294.1 1 5508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001294.1 Genbank region 1 5508 . + . ID=PYKB01001294.1:1..5508;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001294.1 Genbank pseudogene 71 625 . + . ID=gene-C9F09_22085;Name=C9F09_22085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22085;pseudo=true PYKB01001294.1 Protein Homology CDS 71 625 . + 0 ID=cds-C9F09_22085;Parent=gene-C9F09_22085;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455484.1;locus_tag=C9F09_22085;product=aromatic amino acid aminotransferase;pseudo=true;transl_table=11 PYKB01001294.1 Genbank gene 687 1334 . - . ID=gene-C9F09_22090;Name=C9F09_22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22090 PYKB01001294.1 Protein Homology CDS 687 1334 . - 0 ID=cds-TGC81761.1;Parent=gene-C9F09_22090;Dbxref=NCBI_GP:TGC81761.1;Name=TGC81761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=C9F09_22090;product=MBL fold metallo-hydrolase;protein_id=TGC81761.1;transl_table=11 PYKB01001294.1 Genbank gene 1362 1910 . - . ID=gene-C9F09_22095;Name=C9F09_22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22095 PYKB01001294.1 Protein Homology CDS 1362 1910 . - 0 ID=cds-TGC81762.1;Parent=gene-C9F09_22095;Dbxref=NCBI_GP:TGC81762.1;Name=TGC81762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=C9F09_22095;product=DUF882 domain-containing protein;protein_id=TGC81762.1;transl_table=11 PYKB01001294.1 Genbank pseudogene 2019 2233 . + . ID=gene-C9F09_22100;Name=C9F09_22100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22100;pseudo=true PYKB01001294.1 Protein Homology CDS 2019 2233 . + 0 ID=cds-C9F09_22100;Parent=gene-C9F09_22100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004141776.1;locus_tag=C9F09_22100;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001294.1 Genbank gene 2170 4017 . - . ID=gene-C9F09_22105;Name=C9F09_22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22105 PYKB01001294.1 Protein Homology CDS 2170 4017 . - 0 ID=cds-TGC81763.1;Parent=gene-C9F09_22105;Dbxref=NCBI_GP:TGC81763.1;Name=TGC81763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=C9F09_22105;product=L%2CD-transpeptidase;protein_id=TGC81763.1;transl_table=11 PYKB01001294.1 Genbank pseudogene 4362 5438 . - . ID=gene-C9F09_22110;Name=C9F09_22110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22110;pseudo=true PYKB01001294.1 Protein Homology CDS 4362 5438 . - 0 ID=cds-C9F09_22110;Parent=gene-C9F09_22110;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=C9F09_22110;product=chromosome partition protein MukB;pseudo=true;transl_table=11 ##sequence-region PYKB01001038.1 1 5500 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001038.1 Genbank region 1 5500 . + . ID=PYKB01001038.1:1..5500;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001038.1 Genbank gene 14 331 . + . ID=gene-C9F09_17395;Name=C9F09_17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17395 PYKB01001038.1 Protein Homology CDS 14 331 . + 0 ID=cds-TGC87392.1;Parent=gene-C9F09_17395;Dbxref=NCBI_GP:TGC87392.1;Name=TGC87392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839616.1;locus_tag=C9F09_17395;product=hypothetical protein;protein_id=TGC87392.1;transl_table=11 PYKB01001038.1 Genbank gene 677 1396 . + . ID=gene-C9F09_17400;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=C9F09_17400 PYKB01001038.1 Protein Homology CDS 677 1396 . + 0 ID=cds-TGC87386.1;Parent=gene-C9F09_17400;Dbxref=NCBI_GP:TGC87386.1;Name=TGC87386.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=C9F09_17400;product=outer membrane protein PagN;protein_id=TGC87386.1;transl_table=11 PYKB01001038.1 Genbank gene 1400 1615 . - . ID=gene-C9F09_17405;Name=C9F09_17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17405 PYKB01001038.1 Protein Homology CDS 1400 1615 . - 0 ID=cds-TGC87387.1;Parent=gene-C9F09_17405;Dbxref=NCBI_GP:TGC87387.1;Name=TGC87387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=C9F09_17405;product=hypothetical protein;protein_id=TGC87387.1;transl_table=11 PYKB01001038.1 Genbank gene 1735 2682 . - . ID=gene-C9F09_17410;Name=C9F09_17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17410 PYKB01001038.1 Protein Homology CDS 1735 2682 . - 0 ID=cds-TGC87388.1;Parent=gene-C9F09_17410;Dbxref=NCBI_GP:TGC87388.1;Name=TGC87388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=C9F09_17410;product=transcriptional regulator;protein_id=TGC87388.1;transl_table=11 PYKB01001038.1 Genbank gene 3159 3419 . - . ID=gene-C9F09_17415;Name=C9F09_17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17415 PYKB01001038.1 Protein Homology CDS 3159 3419 . - 0 ID=cds-TGC87389.1;Parent=gene-C9F09_17415;Dbxref=NCBI_GP:TGC87389.1;Name=TGC87389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991977.1;locus_tag=C9F09_17415;product=transcriptional activator PerC;protein_id=TGC87389.1;transl_table=11 PYKB01001038.1 Genbank gene 3499 4320 . - . ID=gene-C9F09_17420;Name=C9F09_17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17420 PYKB01001038.1 Protein Homology CDS 3499 4320 . - 0 ID=cds-TGC87390.1;Parent=gene-C9F09_17420;Dbxref=NCBI_GP:TGC87390.1;Name=TGC87390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=C9F09_17420;product=carbohydrate transporter;protein_id=TGC87390.1;transl_table=11 PYKB01001038.1 Genbank gene 4727 5197 . - . ID=gene-C9F09_17425;Name=C9F09_17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17425 PYKB01001038.1 Protein Homology CDS 4727 5197 . - 0 ID=cds-TGC87391.1;Parent=gene-C9F09_17425;Dbxref=NCBI_GP:TGC87391.1;Name=TGC87391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000266935.1;locus_tag=C9F09_17425;product=pilin structural protein SafD;protein_id=TGC87391.1;transl_table=11 PYKB01001038.1 Genbank pseudogene 5219 5410 . - . ID=gene-C9F09_17430;Name=C9F09_17430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17430;pseudo=true PYKB01001038.1 Protein Homology CDS 5219 5410 . - 0 ID=cds-C9F09_17430;Parent=gene-C9F09_17430;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454907.1;locus_tag=C9F09_17430;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000439.1 1 5482 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000439.1 Genbank region 1 5482 . + . ID=PYKB01000439.1:1..5482;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000439.1 Genbank gene 1 379 . - . ID=gene-C9F09_05370;Name=C9F09_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05370;partial=true;start_range=.,1 PYKB01000439.1 Protein Homology CDS 1 379 . - 0 ID=cds-TGC98830.1;Parent=gene-C9F09_05370;Dbxref=NCBI_GP:TGC98830.1;Name=TGC98830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463294.1;locus_tag=C9F09_05370;partial=true;product=inositol 2-dehydrogenase;protein_id=TGC98830.1;start_range=.,1;transl_table=11 PYKB01000439.1 Genbank gene 560 2500 . - . ID=gene-C9F09_05375;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=C9F09_05375 PYKB01000439.1 Protein Homology CDS 560 2500 . - 0 ID=cds-TGC98831.1;Parent=gene-C9F09_05375;Dbxref=NCBI_GP:TGC98831.1;Name=TGC98831.1;gbkey=CDS;gene=iolD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453702.1;locus_tag=C9F09_05375;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=TGC98831.1;transl_table=11 PYKB01000439.1 Genbank gene 2917 4854 . + . ID=gene-C9F09_05380;Name=iolC;gbkey=Gene;gene=iolC;gene_biotype=protein_coding;locus_tag=C9F09_05380 PYKB01000439.1 Protein Homology CDS 2917 4854 . + 0 ID=cds-TGC98832.1;Parent=gene-C9F09_05380;Dbxref=NCBI_GP:TGC98832.1;Name=TGC98832.1;gbkey=CDS;gene=iolC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453701.1;locus_tag=C9F09_05380;product=5-dehydro-2-deoxygluconokinase;protein_id=TGC98832.1;transl_table=11 PYKB01000439.1 Genbank pseudogene 4915 5382 . + . ID=gene-C9F09_05385;Name=C9F09_05385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05385;pseudo=true PYKB01000439.1 Protein Homology CDS 4915 5382 . + 0 ID=cds-C9F09_05385;Parent=gene-C9F09_05385;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463289.1;locus_tag=C9F09_05385;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000891.1 1 5468 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000891.1 Genbank region 1 5468 . + . ID=PYKB01000891.1:1..5468;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000891.1 Genbank gene 20 790 . + . ID=gene-C9F09_14595;Name=C9F09_14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14595 PYKB01000891.1 Protein Homology CDS 20 790 . + 0 ID=cds-TGC90404.1;Parent=gene-C9F09_14595;Dbxref=NCBI_GP:TGC90404.1;Name=TGC90404.1;Note=with AsrAC catalyzes the reduction of sulfite to hydrogen sulfide;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664397.1;locus_tag=C9F09_14595;product=anaerobic sulfite reductase subunit AsrB;protein_id=TGC90404.1;transl_table=11 PYKB01000891.1 Genbank gene 801 1814 . + . ID=gene-C9F09_14600;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=C9F09_14600 PYKB01000891.1 Protein Homology CDS 801 1814 . + 0 ID=cds-TGC90401.1;Parent=gene-C9F09_14600;Dbxref=NCBI_GP:TGC90401.1;Name=TGC90401.1;gbkey=CDS;gene=asrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457081.1;locus_tag=C9F09_14600;product=sulfite reductase subunit C;protein_id=TGC90401.1;transl_table=11 PYKB01000891.1 Genbank gene 1815 2801 . - . ID=gene-C9F09_14605;Name=C9F09_14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14605 PYKB01000891.1 Protein Homology CDS 1815 2801 . - 0 ID=cds-TGC90402.1;Parent=gene-C9F09_14605;Dbxref=NCBI_GP:TGC90402.1;Name=TGC90402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=C9F09_14605;product=nickel transporter;protein_id=TGC90402.1;transl_table=11 PYKB01000891.1 Genbank gene 2792 3430 . - . ID=gene-C9F09_14610;Name=C9F09_14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14610 PYKB01000891.1 Protein Homology CDS 2792 3430 . - 0 ID=cds-TGC90405.1;Parent=gene-C9F09_14610;Dbxref=NCBI_GP:TGC90405.1;Name=TGC90405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=C9F09_14610;product=DUF1007 domain-containing protein;protein_id=TGC90405.1;transl_table=11 PYKB01000891.1 Genbank gene 3556 4830 . + . ID=gene-C9F09_14615;Name=C9F09_14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14615 PYKB01000891.1 Protein Homology CDS 3556 4830 . + 0 ID=cds-TGC90403.1;Parent=gene-C9F09_14615;Dbxref=NCBI_GP:TGC90403.1;Name=TGC90403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=C9F09_14615;product=stationary phase inducible protein CsiE;protein_id=TGC90403.1;transl_table=11 PYKB01000891.1 Genbank gene 4825 5468 . - . ID=gene-C9F09_14620;Name=C9F09_14620;end_range=5468,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14620;partial=true PYKB01000891.1 Protein Homology CDS 4825 5468 . - 2 ID=cds-TGC90406.1;Parent=gene-C9F09_14620;Dbxref=NCBI_GP:TGC90406.1;Name=TGC90406.1;end_range=5468,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457084.1;locus_tag=C9F09_14620;partial=true;product=3-phenylpropionate MFS transporter;protein_id=TGC90406.1;transl_table=11 ##sequence-region PYKB01001107.1 1 13145 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001107.1 Genbank region 1 13145 . + . ID=PYKB01001107.1:1..13145;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001107.1 Genbank gene 287 646 . + . ID=gene-C9F09_18555;Name=C9F09_18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18555 PYKB01001107.1 Protein Homology CDS 287 646 . + 0 ID=cds-TGC85799.1;Parent=gene-C9F09_18555;Dbxref=NCBI_GP:TGC85799.1;Name=TGC85799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463068.1;locus_tag=C9F09_18555;product=baseplate protein;protein_id=TGC85799.1;transl_table=11 PYKB01001107.1 Genbank gene 637 1752 . + . ID=gene-C9F09_18560;Name=C9F09_18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18560 PYKB01001107.1 Protein Homology CDS 637 1752 . + 0 ID=cds-TGC85800.1;Parent=gene-C9F09_18560;Dbxref=NCBI_GP:TGC85800.1;Name=TGC85800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463067.1;locus_tag=C9F09_18560;product=baseplate protein;protein_id=TGC85800.1;transl_table=11 PYKB01001107.1 Genbank gene 1745 2377 . + . ID=gene-C9F09_18565;Name=C9F09_18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18565 PYKB01001107.1 Protein Homology CDS 1745 2377 . + 0 ID=cds-TGC85801.1;Parent=gene-C9F09_18565;Dbxref=NCBI_GP:TGC85801.1;Name=TGC85801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463066.1;locus_tag=C9F09_18565;product=phage tail protein I;protein_id=TGC85801.1;transl_table=11 PYKB01001107.1 Genbank gene 2380 3906 . + . ID=gene-C9F09_18570;Name=C9F09_18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18570 PYKB01001107.1 Protein Homology CDS 2380 3906 . + 0 ID=cds-TGC85802.1;Parent=gene-C9F09_18570;Dbxref=NCBI_GP:TGC85802.1;Name=TGC85802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463065.1;locus_tag=C9F09_18570;product=phage tail protein;protein_id=TGC85802.1;transl_table=11 PYKB01001107.1 Genbank gene 3958 4521 . + . ID=gene-C9F09_18575;Name=C9F09_18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18575 PYKB01001107.1 Protein Homology CDS 3958 4521 . + 0 ID=cds-TGC85811.1;Parent=gene-C9F09_18575;Dbxref=NCBI_GP:TGC85811.1;Name=TGC85811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001520313.1;locus_tag=C9F09_18575;product=hypothetical protein;protein_id=TGC85811.1;transl_table=11 PYKB01001107.1 Genbank gene 4518 4973 . + . ID=gene-C9F09_18580;Name=C9F09_18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18580 PYKB01001107.1 Protein Homology CDS 4518 4973 . + 0 ID=cds-TGC85803.1;Parent=gene-C9F09_18580;Dbxref=NCBI_GP:TGC85803.1;Name=TGC85803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463063.1;locus_tag=C9F09_18580;product=hypothetical protein;protein_id=TGC85803.1;transl_table=11 PYKB01001107.1 Genbank pseudogene 5226 5516 . + . ID=gene-C9F09_18585;Name=C9F09_18585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18585;pseudo=true PYKB01001107.1 Protein Homology CDS 5226 5516 . + 0 ID=cds-C9F09_18585;Parent=gene-C9F09_18585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463062.1;locus_tag=C9F09_18585;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001107.1 Genbank gene 5713 6441 . + . ID=gene-C9F09_18590;Name=C9F09_18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18590 PYKB01001107.1 Protein Homology CDS 5713 6441 . + 0 ID=cds-TGC85804.1;Parent=gene-C9F09_18590;Dbxref=NCBI_GP:TGC85804.1;Name=TGC85804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463061.1;locus_tag=C9F09_18590;product=hypothetical protein;protein_id=TGC85804.1;transl_table=11 PYKB01001107.1 Genbank gene 6703 7644 . + . ID=gene-C9F09_18595;Name=panS;gbkey=Gene;gene=panS;gene_biotype=protein_coding;locus_tag=C9F09_18595 PYKB01001107.1 Protein Homology CDS 6703 7644 . + 0 ID=cds-TGC85805.1;Parent=gene-C9F09_18595;Dbxref=NCBI_GP:TGC85805.1;Name=TGC85805.1;gbkey=CDS;gene=panS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463060.1;locus_tag=C9F09_18595;product=ketopantoate/pantoate/pantothenate transporter PanS;protein_id=TGC85805.1;transl_table=11 PYKB01001107.1 Genbank gene 7742 8014 . + . ID=gene-C9F09_18600;Name=C9F09_18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18600 PYKB01001107.1 Protein Homology CDS 7742 8014 . + 0 ID=cds-TGC85806.1;Parent=gene-C9F09_18600;Dbxref=NCBI_GP:TGC85806.1;Name=TGC85806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458513.1;locus_tag=C9F09_18600;product=hypothetical protein;protein_id=TGC85806.1;transl_table=11 PYKB01001107.1 Genbank gene 8011 8880 . - . ID=gene-C9F09_18605;Name=C9F09_18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18605 PYKB01001107.1 Protein Homology CDS 8011 8880 . - 0 ID=cds-TGC85807.1;Parent=gene-C9F09_18605;Dbxref=NCBI_GP:TGC85807.1;Name=TGC85807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=C9F09_18605;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=TGC85807.1;transl_table=11 PYKB01001107.1 Genbank gene 8927 9466 . - . ID=gene-C9F09_18610;Name=C9F09_18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18610 PYKB01001107.1 Protein Homology CDS 8927 9466 . - 0 ID=cds-TGC85808.1;Parent=gene-C9F09_18610;Dbxref=NCBI_GP:TGC85808.1;Name=TGC85808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458511.1;locus_tag=C9F09_18610;product=DUF2058 domain-containing protein;protein_id=TGC85808.1;transl_table=11 PYKB01001107.1 Genbank gene 9501 9602 . - . ID=gene-C9F09_18615;Name=C9F09_18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18615 PYKB01001107.1 Protein Homology CDS 9501 9602 . - 0 ID=cds-TGC85809.1;Parent=gene-C9F09_18615;Dbxref=NCBI_GP:TGC85809.1;Name=TGC85809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=C9F09_18615;product=hypothetical protein;protein_id=TGC85809.1;transl_table=11 PYKB01001107.1 Genbank gene 9674 10363 . + . ID=gene-C9F09_18620;Name=C9F09_18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18620 PYKB01001107.1 Protein Homology CDS 9674 10363 . + 0 ID=cds-TGC85810.1;Parent=gene-C9F09_18620;Dbxref=NCBI_GP:TGC85810.1;Name=TGC85810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458509.1;locus_tag=C9F09_18620;product=dipeptidase PepE;protein_id=TGC85810.1;transl_table=11 PYKB01001107.1 Genbank pseudogene 10438 12069 . - . ID=gene-C9F09_18625;Name=C9F09_18625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18625;pseudo=true PYKB01001107.1 Protein Homology CDS 10438 12069 . - 0 ID=cds-C9F09_18625;Parent=gene-C9F09_18625;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=C9F09_18625;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001107.1 Genbank gene 12336 13145 . - . ID=gene-C9F09_18630;Name=metH;end_range=13145,.;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=C9F09_18630;partial=true PYKB01001107.1 Protein Homology CDS 12336 13145 . - 0 ID=cds-TGC85812.1;Parent=gene-C9F09_18630;Dbxref=NCBI_GP:TGC85812.1;Name=TGC85812.1;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;end_range=13145,.;gbkey=CDS;gene=metH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463053.3;locus_tag=C9F09_18630;partial=true;product=methionine synthase;protein_id=TGC85812.1;transl_table=11 ##sequence-region PYKB01000553.1 1 5467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000553.1 Genbank region 1 5467 . + . ID=PYKB01000553.1:1..5467;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000553.1 Genbank pseudogene 1 721 . - . ID=gene-C9F09_07630;Name=C9F09_07630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07630;pseudo=true PYKB01000553.1 Protein Homology CDS 1 721 . - 0 ID=cds-C9F09_07630;Parent=gene-C9F09_07630;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=C9F09_07630;product=aldo/keto reductase;pseudo=true;transl_table=11 PYKB01000553.1 Genbank pseudogene 778 2640 . - . ID=gene-C9F09_07635;Name=C9F09_07635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07635;pseudo=true PYKB01000553.1 Protein Homology CDS 778 2640 . - 0 ID=cds-C9F09_07635;Parent=gene-C9F09_07635;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=C9F09_07635;product=1-deoxy-D-xylulose-5-phosphate synthase;pseudo=true;transl_table=11 PYKB01000553.1 Genbank gene 2664 3563 . - . ID=gene-C9F09_07640;Name=C9F09_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07640 PYKB01000553.1 Protein Homology CDS 2664 3563 . - 0 ID=cds-TGC96380.1;Parent=gene-C9F09_07640;Dbxref=NCBI_GP:TGC96380.1;Name=TGC96380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=C9F09_07640;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=TGC96380.1;transl_table=11 PYKB01000553.1 Genbank gene 3564 3806 . - . ID=gene-C9F09_07645;Name=C9F09_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07645 PYKB01000553.1 Protein Homology CDS 3564 3806 . - 0 ID=cds-TGC96381.1;Parent=gene-C9F09_07645;Dbxref=NCBI_GP:TGC96381.1;Name=TGC96381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455018.1;locus_tag=C9F09_07645;product=exodeoxyribonuclease 7 small subunit;protein_id=TGC96381.1;transl_table=11 PYKB01000553.1 Genbank gene 4016 5467 . + . ID=gene-C9F09_07650;Name=C9F09_07650;end_range=5467,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07650;partial=true PYKB01000553.1 Protein Homology CDS 4016 5467 . + 0 ID=cds-TGC96382.1;Parent=gene-C9F09_07650;Dbxref=NCBI_GP:TGC96382.1;Name=TGC96382.1;end_range=5467,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459420.1;locus_tag=C9F09_07650;partial=true;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=TGC96382.1;transl_table=11 ##sequence-region PYKB01000961.1 1 5466 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000961.1 Genbank region 1 5466 . + . ID=PYKB01000961.1:1..5466;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000961.1 Genbank pseudogene 1 402 . + . ID=gene-C9F09_15920;Name=C9F09_15920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15920;pseudo=true PYKB01000961.1 Protein Homology CDS 1 402 . + 0 ID=cds-C9F09_15920;Parent=gene-C9F09_15920;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455708.1;locus_tag=C9F09_15920;product=transcription-repair coupling factor;pseudo=true;transl_table=11 PYKB01000961.1 Genbank gene 550 1515 . + . ID=gene-C9F09_15925;Name=C9F09_15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15925 PYKB01000961.1 Protein Homology CDS 550 1515 . + 0 ID=cds-TGC89089.1;Parent=gene-C9F09_15925;Dbxref=NCBI_GP:TGC89089.1;Name=TGC89089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=C9F09_15925;product=L%2CD-transpeptidase;protein_id=TGC89089.1;transl_table=11 PYKB01000961.1 Genbank gene 1612 1869 . - . ID=gene-C9F09_15930;Name=C9F09_15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15930 PYKB01000961.1 Protein Homology CDS 1612 1869 . - 0 ID=cds-TGC89090.1;Parent=gene-C9F09_15930;Dbxref=NCBI_GP:TGC89090.1;Name=TGC89090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=C9F09_15930;product=outer membrane protein;protein_id=TGC89090.1;transl_table=11 PYKB01000961.1 Genbank gene 2111 2746 . + . ID=gene-C9F09_15935;Name=C9F09_15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15935 PYKB01000961.1 Protein Homology CDS 2111 2746 . + 0 ID=cds-TGC89091.1;Parent=gene-C9F09_15935;Dbxref=NCBI_GP:TGC89091.1;Name=TGC89091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455705.1;locus_tag=C9F09_15935;product=TetR/AcrR family transcriptional regulator;protein_id=TGC89091.1;transl_table=11 PYKB01000961.1 Genbank gene 2820 3359 . - . ID=gene-C9F09_15940;Name=C9F09_15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15940 PYKB01000961.1 Protein Homology CDS 2820 3359 . - 0 ID=cds-TGC89092.1;Parent=gene-C9F09_15940;Dbxref=NCBI_GP:TGC89092.1;Name=TGC89092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455704.1;locus_tag=C9F09_15940;product=hypothetical protein;protein_id=TGC89092.1;transl_table=11 PYKB01000961.1 Genbank gene 3536 4840 . - . ID=gene-C9F09_15945;Name=C9F09_15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15945 PYKB01000961.1 Protein Homology CDS 3536 4840 . - 0 ID=cds-TGC89093.1;Parent=gene-C9F09_15945;Dbxref=NCBI_GP:TGC89093.1;Name=TGC89093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455703.1;locus_tag=C9F09_15945;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=TGC89093.1;transl_table=11 PYKB01000961.1 Genbank pseudogene 5095 5466 . - . ID=gene-C9F09_15950;Name=C9F09_15950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15950;pseudo=true PYKB01000961.1 Protein Homology CDS 5095 5466 . - 0 ID=cds-C9F09_15950;Parent=gene-C9F09_15950;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=C9F09_15950;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001669.1 1 5464 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001669.1 Genbank region 1 5464 . + . ID=PYKB01001669.1:1..5464;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001669.1 Genbank gene 1 1085 . + . ID=gene-C9F09_29040;Name=C9F09_29040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29040;partial=true;start_range=.,1 PYKB01001669.1 Protein Homology CDS 1 1085 . + 2 ID=cds-TGC73102.1;Parent=gene-C9F09_29040;Dbxref=NCBI_GP:TGC73102.1;Name=TGC73102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=C9F09_29040;partial=true;product=formate dehydrogenase;protein_id=TGC73102.1;start_range=.,1;transl_table=11 PYKB01001669.1 Genbank gene 1099 1983 . + . ID=gene-C9F09_29045;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=C9F09_29045 PYKB01001669.1 Protein Homology CDS 1099 1983 . + 0 ID=cds-TGC73103.1;Parent=gene-C9F09_29045;Dbxref=NCBI_GP:TGC73103.1;Name=TGC73103.1;gbkey=CDS;gene=fdxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=C9F09_29045;product=formate dehydrogenase subunit beta;protein_id=TGC73103.1;transl_table=11 PYKB01001669.1 Genbank gene 1976 2632 . + . ID=gene-C9F09_29050;Name=C9F09_29050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29050 PYKB01001669.1 Protein Homology CDS 1976 2632 . + 0 ID=cds-TGC73104.1;Parent=gene-C9F09_29050;Dbxref=NCBI_GP:TGC73104.1;Name=TGC73104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=C9F09_29050;product=formate dehydrogenase cytochrome b556 subunit;protein_id=TGC73104.1;transl_table=11 PYKB01001669.1 Genbank gene 2723 3733 . - . ID=gene-C9F09_29055;Name=C9F09_29055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29055 PYKB01001669.1 Protein Homology CDS 2723 3733 . - 0 ID=cds-TGC73105.1;Parent=gene-C9F09_29055;Dbxref=NCBI_GP:TGC73105.1;Name=TGC73105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455923.1;locus_tag=C9F09_29055;product=alcohol dehydrogenase AdhP;protein_id=TGC73105.1;transl_table=11 PYKB01001669.1 Genbank gene 4019 5464 . - . ID=gene-C9F09_29060;Name=C9F09_29060;end_range=5464,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29060;partial=true PYKB01001669.1 Protein Homology CDS 4019 5464 . - 0 ID=cds-TGC73106.1;Parent=gene-C9F09_29060;Dbxref=NCBI_GP:TGC73106.1;Name=TGC73106.1;end_range=5464,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=C9F09_29060;partial=true;product=NAD-dependent malic enzyme;protein_id=TGC73106.1;transl_table=11 ##sequence-region PYKB01001073.1 1 5461 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001073.1 Genbank region 1 5461 . + . ID=PYKB01001073.1:1..5461;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001073.1 Genbank gene 1 1784 . - . ID=gene-C9F09_17940;Name=C9F09_17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17940;partial=true;start_range=.,1 PYKB01001073.1 Protein Homology CDS 1 1784 . - 0 ID=cds-TGC86660.1;Parent=gene-C9F09_17940;Dbxref=NCBI_GP:TGC86660.1;Name=TGC86660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458400.1;locus_tag=C9F09_17940;partial=true;product=RNA-binding transcriptional accessory protein;protein_id=TGC86660.1;start_range=.,1;transl_table=11 PYKB01001073.1 Genbank gene 1883 2356 . - . ID=gene-C9F09_17945;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=C9F09_17945 PYKB01001073.1 Protein Homology CDS 1883 2356 . - 0 ID=cds-TGC86661.1;Parent=gene-C9F09_17945;Dbxref=NCBI_GP:TGC86661.1;Name=TGC86661.1;gbkey=CDS;gene=greB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458401.1;locus_tag=C9F09_17945;product=transcription elongation factor GreB;protein_id=TGC86661.1;transl_table=11 PYKB01001073.1 Genbank gene 2582 3301 . + . ID=gene-C9F09_17950;Name=C9F09_17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17950 PYKB01001073.1 Protein Homology CDS 2582 3301 . + 0 ID=cds-TGC86662.1;Parent=gene-C9F09_17950;Dbxref=NCBI_GP:TGC86662.1;Name=TGC86662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312274.1;locus_tag=C9F09_17950;product=DNA-binding response regulator;protein_id=TGC86662.1;transl_table=11 PYKB01001073.1 Genbank gene 3298 4650 . + . ID=gene-C9F09_17955;Name=C9F09_17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17955 PYKB01001073.1 Protein Homology CDS 3298 4650 . + 0 ID=cds-TGC86663.1;Parent=gene-C9F09_17955;Dbxref=NCBI_GP:TGC86663.1;Name=TGC86663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=C9F09_17955;product=two-component system sensor histidine kinase EnvZ;protein_id=TGC86663.1;transl_table=11 PYKB01001073.1 Genbank gene 4725 5461 . - . ID=gene-C9F09_17960;Name=C9F09_17960;end_range=5461,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17960;partial=true PYKB01001073.1 Protein Homology CDS 4725 5461 . - 2 ID=cds-TGC86664.1;Parent=gene-C9F09_17960;Dbxref=NCBI_GP:TGC86664.1;Name=TGC86664.1;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;end_range=5461,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458404.1;locus_tag=C9F09_17960;partial=true;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=TGC86664.1;transl_table=11 ##sequence-region PYKB01000507.1 1 5460 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000507.1 Genbank region 1 5460 . + . ID=PYKB01000507.1:1..5460;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000507.1 Genbank gene 1 277 . - . ID=gene-C9F09_06525;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=C9F09_06525;partial=true;start_range=.,1 PYKB01000507.1 Protein Homology CDS 1 277 . - 0 ID=cds-TGC97422.1;Parent=gene-C9F09_06525;Dbxref=NCBI_GP:TGC97422.1;Name=TGC97422.1;gbkey=CDS;gene=rplU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=C9F09_06525;partial=true;product=50S ribosomal protein L21;protein_id=TGC97422.1;start_range=.,1;transl_table=11 PYKB01000507.1 Genbank gene 535 1506 . + . ID=gene-C9F09_06530;Name=C9F09_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06530 PYKB01000507.1 Protein Homology CDS 535 1506 . + 0 ID=cds-TGC97423.1;Parent=gene-C9F09_06530;Dbxref=NCBI_GP:TGC97423.1;Name=TGC97423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457684.1;locus_tag=C9F09_06530;product=octaprenyl diphosphate synthase;protein_id=TGC97423.1;transl_table=11 PYKB01000507.1 Genbank gene 1738 2025 . + . ID=gene-C9F09_06535;Name=C9F09_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06535 PYKB01000507.1 Protein Homology CDS 1738 2025 . + 0 ID=cds-TGC97424.1;Parent=gene-C9F09_06535;Dbxref=NCBI_GP:TGC97424.1;Name=TGC97424.1;Note=activator of maltose metabolism genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457685.1;locus_tag=C9F09_06535;product=transcriptional regulator;protein_id=TGC97424.1;transl_table=11 PYKB01000507.1 Genbank gene 2084 3343 . - . ID=gene-C9F09_06540;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=C9F09_06540 PYKB01000507.1 Protein Homology CDS 2084 3343 . - 0 ID=cds-TGC97425.1;Parent=gene-C9F09_06540;Dbxref=NCBI_GP:TGC97425.1;Name=TGC97425.1;gbkey=CDS;gene=murA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457686.1;locus_tag=C9F09_06540;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=TGC97425.1;transl_table=11 PYKB01000507.1 Genbank gene 3397 3651 . - . ID=gene-C9F09_06545;Name=C9F09_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06545 PYKB01000507.1 Protein Homology CDS 3397 3651 . - 0 ID=cds-TGC97429.1;Parent=gene-C9F09_06545;Dbxref=NCBI_GP:TGC97429.1;Name=TGC97429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=C9F09_06545;product=BolA family transcriptional regulator;protein_id=TGC97429.1;transl_table=11 PYKB01000507.1 Genbank gene 3839 4135 . - . ID=gene-C9F09_06550;Name=C9F09_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06550 PYKB01000507.1 Protein Homology CDS 3839 4135 . - 0 ID=cds-TGC97426.1;Parent=gene-C9F09_06550;Dbxref=NCBI_GP:TGC97426.1;Name=TGC97426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457688.1;locus_tag=C9F09_06550;product=STAS domain-containing protein;protein_id=TGC97426.1;transl_table=11 PYKB01000507.1 Genbank gene 4135 4770 . - . ID=gene-C9F09_06555;Name=C9F09_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06555 PYKB01000507.1 Protein Homology CDS 4135 4770 . - 0 ID=cds-TGC97427.1;Parent=gene-C9F09_06555;Dbxref=NCBI_GP:TGC97427.1;Name=TGC97427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457689.1;locus_tag=C9F09_06555;product=phospholipid-binding protein MlaC;protein_id=TGC97427.1;transl_table=11 PYKB01000507.1 Genbank gene 4789 5340 . - . ID=gene-C9F09_06560;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=C9F09_06560 PYKB01000507.1 Protein Homology CDS 4789 5340 . - 0 ID=cds-TGC97430.1;Parent=gene-C9F09_06560;Dbxref=NCBI_GP:TGC97430.1;Name=TGC97430.1;gbkey=CDS;gene=mlaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457690.1;locus_tag=C9F09_06560;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=TGC97430.1;transl_table=11 PYKB01000507.1 Genbank gene 5345 5460 . - . ID=gene-C9F09_06565;Name=C9F09_06565;end_range=5460,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06565;partial=true PYKB01000507.1 Protein Homology CDS 5345 5460 . - 2 ID=cds-TGC97428.1;Parent=gene-C9F09_06565;Dbxref=NCBI_GP:TGC97428.1;Name=TGC97428.1;end_range=5460,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=C9F09_06565;partial=true;product=ABC transporter permease;protein_id=TGC97428.1;transl_table=11 ##sequence-region PYKB01000498.1 1 5434 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000498.1 Genbank region 1 5434 . + . ID=PYKB01000498.1:1..5434;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000498.1 Genbank gene 1 1705 . + . ID=gene-C9F09_06345;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=C9F09_06345;partial=true;start_range=.,1 PYKB01000498.1 Protein Homology CDS 1 1705 . + 1 ID=cds-TGC97724.1;Parent=gene-C9F09_06345;Dbxref=NCBI_GP:TGC97724.1;Name=TGC97724.1;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;gbkey=CDS;gene=clpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=C9F09_06345;partial=true;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=TGC97724.1;start_range=.,1;transl_table=11 PYKB01000498.1 Genbank gene 1894 1981 . - . ID=gene-C9F09_06350;Name=C9F09_06350;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_06350 PYKB01000498.1 tRNAscan-SE tRNA 1894 1981 . - . ID=rna-C9F09_06350;Parent=gene-C9F09_06350;anticodon=(pos:complement(1945..1947));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_06350;product=tRNA-Ser PYKB01000498.1 tRNAscan-SE exon 1894 1981 . - . ID=exon-C9F09_06350-1;Parent=rna-C9F09_06350;anticodon=(pos:complement(1945..1947));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_06350;product=tRNA-Ser PYKB01000498.1 Genbank gene 2129 2806 . - . ID=gene-C9F09_06355;Name=C9F09_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06355 PYKB01000498.1 Protein Homology CDS 2129 2806 . - 0 ID=cds-TGC97725.1;Parent=gene-C9F09_06355;Dbxref=NCBI_GP:TGC97725.1;Name=TGC97725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=C9F09_06355;product=hydrolase;protein_id=TGC97725.1;transl_table=11 PYKB01000498.1 Genbank gene 2826 3686 . - . ID=gene-C9F09_06360;Name=C9F09_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06360 PYKB01000498.1 Protein Homology CDS 2826 3686 . - 0 ID=cds-TGC97726.1;Parent=gene-C9F09_06360;Dbxref=NCBI_GP:TGC97726.1;Name=TGC97726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=C9F09_06360;product=pirin family protein;protein_id=TGC97726.1;transl_table=11 PYKB01000498.1 Genbank gene 3795 4706 . + . ID=gene-C9F09_06365;Name=C9F09_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06365 PYKB01000498.1 Protein Homology CDS 3795 4706 . + 0 ID=cds-TGC97727.1;Parent=gene-C9F09_06365;Dbxref=NCBI_GP:TGC97727.1;Name=TGC97727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455441.1;locus_tag=C9F09_06365;product=LysR family transcriptional regulator;protein_id=TGC97727.1;transl_table=11 PYKB01000498.1 Genbank gene 4797 5015 . - . ID=gene-C9F09_06370;Name=C9F09_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06370 PYKB01000498.1 Protein Homology CDS 4797 5015 . - 0 ID=cds-TGC97728.1;Parent=gene-C9F09_06370;Dbxref=NCBI_GP:TGC97728.1;Name=TGC97728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=C9F09_06370;product=translation initiation factor IF-1;protein_id=TGC97728.1;transl_table=11 PYKB01000498.1 Genbank gene 4943 5326 . - . ID=gene-C9F09_06375;Name=C9F09_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06375 PYKB01000498.1 Protein Homology CDS 4943 5326 . - 0 ID=cds-TGC97729.1;Parent=gene-C9F09_06375;Dbxref=NCBI_GP:TGC97729.1;Name=TGC97729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459930.1;locus_tag=C9F09_06375;product=hypothetical protein;protein_id=TGC97729.1;transl_table=11 PYKB01000498.1 Genbank gene 5327 5434 . - . ID=gene-C9F09_06380;Name=C9F09_06380;end_range=5434,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06380;partial=true PYKB01000498.1 Protein Homology CDS 5327 5434 . - 0 ID=cds-TGC97730.1;Parent=gene-C9F09_06380;Dbxref=NCBI_GP:TGC97730.1;Name=TGC97730.1;end_range=5434,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455443.1;locus_tag=C9F09_06380;partial=true;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=TGC97730.1;transl_table=11 ##sequence-region PYKB01000024.1 1 5429 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000024.1 Genbank region 1 5429 . + . ID=PYKB01000024.1:1..5429;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000024.1 Genbank gene 1 148 . + . ID=gene-C9F09_00265;Name=C9F09_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00265;partial=true;start_range=.,1 PYKB01000024.1 Protein Homology CDS 1 148 . + 1 ID=cds-TGD06934.1;Parent=gene-C9F09_00265;Dbxref=NCBI_GP:TGD06934.1;Name=TGD06934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455214.1;locus_tag=C9F09_00265;partial=true;product=hypothetical protein;protein_id=TGD06934.1;start_range=.,1;transl_table=11 PYKB01000024.1 Genbank gene 288 1499 . + . ID=gene-C9F09_00270;Name=C9F09_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00270 PYKB01000024.1 Protein Homology CDS 288 1499 . + 0 ID=cds-TGD06935.1;Parent=gene-C9F09_00270;Dbxref=NCBI_GP:TGD06935.1;Name=TGD06935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=C9F09_00270;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=TGD06935.1;transl_table=11 PYKB01000024.1 Genbank gene 1608 1871 . + . ID=gene-C9F09_00275;Name=C9F09_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00275 PYKB01000024.1 Protein Homology CDS 1608 1871 . + 0 ID=cds-TGD06936.1;Parent=gene-C9F09_00275;Dbxref=NCBI_GP:TGD06936.1;Name=TGD06936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455212.1;locus_tag=C9F09_00275;product=hypothetical protein;protein_id=TGD06936.1;transl_table=11 PYKB01000024.1 Genbank gene 1971 2612 . + . ID=gene-C9F09_00280;Name=C9F09_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00280 PYKB01000024.1 Protein Homology CDS 1971 2612 . + 0 ID=cds-TGD06937.1;Parent=gene-C9F09_00280;Dbxref=NCBI_GP:TGD06937.1;Name=TGD06937.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411483.1;locus_tag=C9F09_00280;product=octanoyltransferase;protein_id=TGD06937.1;transl_table=11 PYKB01000024.1 Genbank gene 2914 3867 . + . ID=gene-C9F09_00285;Name=C9F09_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00285 PYKB01000024.1 Protein Homology CDS 2914 3867 . + 0 ID=cds-TGD06938.1;Parent=gene-C9F09_00285;Dbxref=NCBI_GP:TGD06938.1;Name=TGD06938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455210.1;locus_tag=C9F09_00285;product=DNA-binding transcriptional regulator;protein_id=TGD06938.1;transl_table=11 PYKB01000024.1 Genbank gene 4073 5038 . + . ID=gene-C9F09_00290;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=C9F09_00290 PYKB01000024.1 Protein Homology CDS 4073 5038 . + 0 ID=cds-TGD06939.1;Parent=gene-C9F09_00290;Dbxref=NCBI_GP:TGD06939.1;Name=TGD06939.1;gbkey=CDS;gene=lipA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=C9F09_00290;product=lipoyl synthase;protein_id=TGD06939.1;transl_table=11 PYKB01000024.1 Genbank gene 5124 5327 . - . ID=gene-C9F09_00295;Name=C9F09_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00295 PYKB01000024.1 Protein Homology CDS 5124 5327 . - 0 ID=cds-TGD06940.1;Parent=gene-C9F09_00295;Dbxref=NCBI_GP:TGD06940.1;Name=TGD06940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455208.1;locus_tag=C9F09_00295;product=twin-arginine translocase subunit TatE;protein_id=TGD06940.1;transl_table=11 ##sequence-region PYKB01000658.1 1 5429 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000658.1 Genbank region 1 5429 . + . ID=PYKB01000658.1:1..5429;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000658.1 Genbank pseudogene 73 201 . - . ID=gene-C9F09_09885;Name=C9F09_09885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_09885;pseudo=true PYKB01000658.1 Protein Homology CDS 73 201 . - 0 ID=cds-C9F09_09885;Parent=gene-C9F09_09885;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312014.1;locus_tag=C9F09_09885;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 PYKB01000658.1 Genbank gene 306 1007 . + . ID=gene-C9F09_09890;Name=C9F09_09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09890 PYKB01000658.1 Protein Homology CDS 306 1007 . + 0 ID=cds-TGC94251.1;Parent=gene-C9F09_09890;Dbxref=NCBI_GP:TGC94251.1;Name=TGC94251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457625.1;locus_tag=C9F09_09890;product=pirin family protein;protein_id=TGC94251.1;transl_table=11 PYKB01000658.1 Genbank gene 1031 1195 . + . ID=gene-C9F09_09895;Name=C9F09_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09895 PYKB01000658.1 Protein Homology CDS 1031 1195 . + 0 ID=cds-TGC94252.1;Parent=gene-C9F09_09895;Dbxref=NCBI_GP:TGC94252.1;Name=TGC94252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457626.1;locus_tag=C9F09_09895;product=hypothetical protein;protein_id=TGC94252.1;transl_table=11 PYKB01000658.1 Genbank gene 1308 2618 . - . ID=gene-C9F09_09900;Name=C9F09_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09900 PYKB01000658.1 Protein Homology CDS 1308 2618 . - 0 ID=cds-TGC94253.1;Parent=gene-C9F09_09900;Dbxref=NCBI_GP:TGC94253.1;Name=TGC94253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457627.1;locus_tag=C9F09_09900;product=hypothetical protein;protein_id=TGC94253.1;transl_table=11 PYKB01000658.1 Genbank gene 2644 3975 . - . ID=gene-C9F09_09905;Name=C9F09_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09905 PYKB01000658.1 Protein Homology CDS 2644 3975 . - 0 ID=cds-TGC94254.1;Parent=gene-C9F09_09905;Dbxref=NCBI_GP:TGC94254.1;Name=TGC94254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=C9F09_09905;product=hypothetical protein;protein_id=TGC94254.1;transl_table=11 PYKB01000658.1 Genbank pseudogene 4291 5292 . - . ID=gene-C9F09_09910;Name=C9F09_09910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_09910;pseudo=true PYKB01000658.1 Protein Homology CDS 4291 5292 . - 0 ID=cds-C9F09_09910;Parent=gene-C9F09_09910;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026204.1;locus_tag=C9F09_09910;product=L-serine ammonia-lyase;pseudo=true;transl_table=11 ##sequence-region PYKB01000287.1 1 5416 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000287.1 Genbank region 1 5416 . + . ID=PYKB01000287.1:1..5416;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000287.1 Genbank gene 1 357 . + . ID=gene-C9F09_03270;Name=C9F09_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03270;partial=true;start_range=.,1 PYKB01000287.1 Protein Homology CDS 1 357 . + 0 ID=cds-TGD01637.1;Parent=gene-C9F09_03270;Dbxref=NCBI_GP:TGD01637.1;Name=TGD01637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=C9F09_03270;partial=true;product=RNA polymerase-associated protein RapA;protein_id=TGD01637.1;start_range=.,1;transl_table=11 PYKB01000287.1 Genbank gene 369 1028 . + . ID=gene-C9F09_03275;Name=C9F09_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03275 PYKB01000287.1 Protein Homology CDS 369 1028 . + 0 ID=cds-TGD01638.1;Parent=gene-C9F09_03275;Dbxref=NCBI_GP:TGD01638.1;Name=TGD01638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=C9F09_03275;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=TGD01638.1;transl_table=11 PYKB01000287.1 Genbank gene 1123 1935 . - . ID=gene-C9F09_03280;Name=C9F09_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03280 PYKB01000287.1 Protein Homology CDS 1123 1935 . - 0 ID=cds-TGD01639.1;Parent=gene-C9F09_03280;Dbxref=NCBI_GP:TGD01639.1;Name=TGD01639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454706.1;locus_tag=C9F09_03280;product=molecular chaperone DjlA;protein_id=TGD01639.1;transl_table=11 PYKB01000287.1 Genbank gene 2189 4549 . + . ID=gene-C9F09_03285;Name=C9F09_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03285 PYKB01000287.1 Protein Homology CDS 2189 4549 . + 0 ID=cds-TGD01640.1;Parent=gene-C9F09_03285;Dbxref=NCBI_GP:TGD01640.1;Name=TGD01640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=C9F09_03285;product=LPS assembly protein LptD;protein_id=TGD01640.1;transl_table=11 PYKB01000287.1 Genbank pseudogene 4603 5343 . + . ID=gene-C9F09_03290;Name=C9F09_03290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03290;pseudo=true PYKB01000287.1 Protein Homology CDS 4603 5343 . + 0 ID=cds-C9F09_03290;Parent=gene-C9F09_03290;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454704.1;locus_tag=C9F09_03290;product=peptidylprolyl isomerase SurA;pseudo=true;transl_table=11 ##sequence-region PYKB01001231.1 1 5415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001231.1 Genbank region 1 5415 . + . ID=PYKB01001231.1:1..5415;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001231.1 Genbank gene 1 2437 . + . ID=gene-C9F09_20815;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=C9F09_20815;partial=true;start_range=.,1 PYKB01001231.1 Protein Homology CDS 1 2437 . + 1 ID=cds-TGC82899.1;Parent=gene-C9F09_20815;Dbxref=NCBI_GP:TGC82899.1;Name=TGC82899.1;gbkey=CDS;gene=valS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=C9F09_20815;partial=true;product=valine--tRNA ligase;protein_id=TGC82899.1;start_range=.,1;transl_table=11 PYKB01001231.1 Genbank gene 2579 3766 . - . ID=gene-C9F09_20820;Name=C9F09_20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20820 PYKB01001231.1 Protein Homology CDS 2579 3766 . - 0 ID=cds-TGC82900.1;Parent=gene-C9F09_20820;Dbxref=NCBI_GP:TGC82900.1;Name=TGC82900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=C9F09_20820;product=DUF898 domain-containing protein;protein_id=TGC82900.1;transl_table=11 PYKB01001231.1 Genbank gene 3961 4464 . + . ID=gene-C9F09_20825;Name=C9F09_20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20825 PYKB01001231.1 Protein Homology CDS 3961 4464 . + 0 ID=cds-TGC82901.1;Parent=gene-C9F09_20825;Dbxref=NCBI_GP:TGC82901.1;Name=TGC82901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=C9F09_20825;product=N-acetyltransferase;protein_id=TGC82901.1;transl_table=11 PYKB01001231.1 Genbank gene 4571 5059 . + . ID=gene-C9F09_20830;Name=C9F09_20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20830 PYKB01001231.1 Protein Homology CDS 4571 5059 . + 0 ID=cds-TGC82902.1;Parent=gene-C9F09_20830;Dbxref=NCBI_GP:TGC82902.1;Name=TGC82902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458890.1;locus_tag=C9F09_20830;product=DUF3617 domain-containing protein;protein_id=TGC82902.1;transl_table=11 PYKB01001231.1 Genbank gene 5293 5415 . - . ID=gene-C9F09_20835;Name=C9F09_20835;end_range=5415,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20835;partial=true PYKB01001231.1 Protein Homology CDS 5293 5415 . - 0 ID=cds-TGC82903.1;Parent=gene-C9F09_20835;Dbxref=NCBI_GP:TGC82903.1;Name=TGC82903.1;end_range=5415,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=C9F09_20835;partial=true;product=tRNA 2-methylthio-N6-isopentenyl adenosine(37) hydroxylase MiaE;protein_id=TGC82903.1;transl_table=11 ##sequence-region PYKB01000984.1 1 13080 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000984.1 Genbank region 1 13080 . + . ID=PYKB01000984.1:1..13080;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000984.1 Genbank gene 130 735 . - . ID=gene-C9F09_16355;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=C9F09_16355 PYKB01000984.1 Protein Homology CDS 130 735 . - 0 ID=cds-TGC88496.1;Parent=gene-C9F09_16355;Dbxref=NCBI_GP:TGC88496.1;Name=TGC88496.1;gbkey=CDS;gene=leuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454722.1;locus_tag=C9F09_16355;product=3-isopropylmalate dehydratase small subunit;protein_id=TGC88496.1;transl_table=11 PYKB01000984.1 Genbank gene 746 2146 . - . ID=gene-C9F09_16360;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=C9F09_16360 PYKB01000984.1 Protein Homology CDS 746 2146 . - 0 ID=cds-TGC88497.1;Parent=gene-C9F09_16360;Dbxref=NCBI_GP:TGC88497.1;Name=TGC88497.1;gbkey=CDS;gene=leuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454723.1;locus_tag=C9F09_16360;product=3-isopropylmalate dehydratase large subunit;protein_id=TGC88497.1;transl_table=11 PYKB01000984.1 Genbank gene 2149 3240 . - . ID=gene-C9F09_16365;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=C9F09_16365 PYKB01000984.1 Protein Homology CDS 2149 3240 . - 0 ID=cds-TGC88498.1;Parent=gene-C9F09_16365;Dbxref=NCBI_GP:TGC88498.1;Name=TGC88498.1;gbkey=CDS;gene=leuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=C9F09_16365;product=3-isopropylmalate dehydrogenase;protein_id=TGC88498.1;transl_table=11 PYKB01000984.1 Genbank gene 3240 4811 . - . ID=gene-C9F09_16370;Name=C9F09_16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16370 PYKB01000984.1 Protein Homology CDS 3240 4811 . - 0 ID=cds-TGC88499.1;Parent=gene-C9F09_16370;Dbxref=NCBI_GP:TGC88499.1;Name=TGC88499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=C9F09_16370;product=2-isopropylmalate synthase;protein_id=TGC88499.1;transl_table=11 PYKB01000984.1 Genbank gene 4899 4985 . - . ID=gene-C9F09_16375;Name=C9F09_16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16375 PYKB01000984.1 Protein Homology CDS 4899 4985 . - 0 ID=cds-TGC88500.1;Parent=gene-C9F09_16375;Dbxref=NCBI_GP:TGC88500.1;Name=TGC88500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=C9F09_16375;product=leu operon leader peptide;protein_id=TGC88500.1;transl_table=11 PYKB01000984.1 Genbank gene 5642 6586 . + . ID=gene-C9F09_16380;Name=C9F09_16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16380 PYKB01000984.1 Protein Homology CDS 5642 6586 . + 0 ID=cds-TGC88501.1;Parent=gene-C9F09_16380;Dbxref=NCBI_GP:TGC88501.1;Name=TGC88501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=C9F09_16380;product=transcriptional regulator;protein_id=TGC88501.1;transl_table=11 PYKB01000984.1 Genbank gene 6908 8632 . + . ID=gene-C9F09_16385;Name=C9F09_16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16385 PYKB01000984.1 Protein Homology CDS 6908 8632 . + 0 ID=cds-TGC88502.1;Parent=gene-C9F09_16385;Dbxref=NCBI_GP:TGC88502.1;Name=TGC88502.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454728.1;locus_tag=C9F09_16385;product=acetolactate synthase 3 large subunit;protein_id=TGC88502.1;transl_table=11 PYKB01000984.1 Genbank gene 8635 9126 . + . ID=gene-C9F09_16390;Name=C9F09_16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16390 PYKB01000984.1 Protein Homology CDS 8635 9126 . + 0 ID=cds-TGC88508.1;Parent=gene-C9F09_16390;Dbxref=NCBI_GP:TGC88508.1;Name=TGC88508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=C9F09_16390;product=acetolactate synthase small subunit;protein_id=TGC88508.1;transl_table=11 PYKB01000984.1 Genbank gene 9410 10414 . + . ID=gene-C9F09_16395;Name=C9F09_16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16395 PYKB01000984.1 Protein Homology CDS 9410 10414 . + 0 ID=cds-TGC88503.1;Parent=gene-C9F09_16395;Dbxref=NCBI_GP:TGC88503.1;Name=TGC88503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454730.1;locus_tag=C9F09_16395;product=catabolite repressor/activator;protein_id=TGC88503.1;transl_table=11 PYKB01000984.1 Genbank gene 11020 11496 . + . ID=gene-C9F09_16400;Name=C9F09_16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16400 PYKB01000984.1 Protein Homology CDS 11020 11496 . + 0 ID=cds-TGC88504.1;Parent=gene-C9F09_16400;Dbxref=NCBI_GP:TGC88504.1;Name=TGC88504.1;Note=MraZ%3B UPF0040%3B crystal structure shows similarity to AbrB;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459124.1;locus_tag=C9F09_16400;product=cell division/cell wall cluster transcriptional repressor MraZ;protein_id=TGC88504.1;transl_table=11 PYKB01000984.1 Genbank gene 11480 12421 . + . ID=gene-C9F09_16405;Name=C9F09_16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16405 PYKB01000984.1 Protein Homology CDS 11480 12421 . + 0 ID=cds-TGC88505.1;Parent=gene-C9F09_16405;Dbxref=NCBI_GP:TGC88505.1;Name=TGC88505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=C9F09_16405;product=ribosomal RNA small subunit methyltransferase H;protein_id=TGC88505.1;transl_table=11 PYKB01000984.1 Genbank gene 12418 12783 . + . ID=gene-C9F09_16410;Name=C9F09_16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16410 PYKB01000984.1 Protein Homology CDS 12418 12783 . + 0 ID=cds-TGC88506.1;Parent=gene-C9F09_16410;Dbxref=NCBI_GP:TGC88506.1;Name=TGC88506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=C9F09_16410;product=cell division protein FtsL;protein_id=TGC88506.1;transl_table=11 PYKB01000984.1 Genbank gene 12799 13080 . + . ID=gene-C9F09_16415;Name=C9F09_16415;end_range=13080,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16415;partial=true PYKB01000984.1 Protein Homology CDS 12799 13080 . + 0 ID=cds-TGC88507.1;Parent=gene-C9F09_16415;Dbxref=NCBI_GP:TGC88507.1;Name=TGC88507.1;end_range=13080,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=C9F09_16415;partial=true;product=hypothetical protein;protein_id=TGC88507.1;transl_table=11 ##sequence-region PYKB01000158.1 1 5395 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000158.1 Genbank region 1 5395 . + . ID=PYKB01000158.1:1..5395;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000158.1 Genbank pseudogene 1 714 . - . ID=gene-C9F09_01750;Name=C9F09_01750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01750;pseudo=true PYKB01000158.1 Protein Homology CDS 1 714 . - 0 ID=cds-C9F09_01750;Parent=gene-C9F09_01750;Note=catalyzes the addition of the acetyl moity of acetyl-CoA to an N-hydroxy-arylamine to form an N-acetoxyarylamine%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=C9F09_01750;product=N-hydroxyarylamine O-acetyltransferase;pseudo=true;transl_table=11 PYKB01000158.1 Genbank gene 998 1630 . - . ID=gene-C9F09_01755;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=C9F09_01755 PYKB01000158.1 Protein Homology CDS 998 1630 . - 0 ID=cds-TGD04306.1;Parent=gene-C9F09_01755;Dbxref=NCBI_GP:TGD04306.1;Name=TGD04306.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=C9F09_01755;product=type III secretion system effector SteA;protein_id=TGD04306.1;transl_table=11 PYKB01000158.1 Genbank pseudogene 1695 1907 . + . ID=gene-C9F09_01760;Name=C9F09_01760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01760;pseudo=true PYKB01000158.1 Protein Homology CDS 1695 1907 . + 0 ID=cds-C9F09_01760;Parent=gene-C9F09_01760;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526408.1;locus_tag=C9F09_01760;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000158.1 Genbank gene 2143 3636 . + . ID=gene-C9F09_01765;Name=C9F09_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01765 PYKB01000158.1 Protein Homology CDS 2143 3636 . + 0 ID=cds-TGD04307.1;Parent=gene-C9F09_01765;Dbxref=NCBI_GP:TGD04307.1;Name=TGD04307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455912.1;locus_tag=C9F09_01765;product=L-asparagine permease;protein_id=TGD04307.1;transl_table=11 PYKB01000158.1 Genbank gene 3713 3934 . - . ID=gene-C9F09_01770;Name=C9F09_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01770 PYKB01000158.1 Protein Homology CDS 3713 3934 . - 0 ID=cds-TGD04308.1;Parent=gene-C9F09_01770;Dbxref=NCBI_GP:TGD04308.1;Name=TGD04308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455911.1;locus_tag=C9F09_01770;product=YgdI/YgdR family lipoprotein;protein_id=TGD04308.1;transl_table=11 PYKB01000158.1 Genbank gene 4079 5140 . - . ID=gene-C9F09_01775;Name=C9F09_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01775 PYKB01000158.1 Protein Homology CDS 4079 5140 . - 0 ID=cds-TGD04309.1;Parent=gene-C9F09_01775;Dbxref=NCBI_GP:TGD04309.1;Name=TGD04309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455910.1;locus_tag=C9F09_01775;product=hypothetical protein;protein_id=TGD04309.1;transl_table=11 ##sequence-region PYKB01000431.1 1 5388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000431.1 Genbank region 1 5388 . + . ID=PYKB01000431.1:1..5388;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000431.1 Genbank pseudogene 1 1446 . + . ID=gene-C9F09_05140;Name=C9F09_05140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05140;pseudo=true PYKB01000431.1 Protein Homology CDS 1 1446 . + 0 ID=cds-C9F09_05140;Parent=gene-C9F09_05140;Note=sigma 54-dependent%3B regulates genes involved in forming a 2'%2C3'-cyclic phosphodiester on RNA%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462424.1;locus_tag=C9F09_05140;product=transcriptional regulator;pseudo=true;transl_table=11 PYKB01000431.1 Genbank gene 1443 2201 . - . ID=gene-C9F09_05145;Name=C9F09_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05145 PYKB01000431.1 Protein Homology CDS 1443 2201 . - 0 ID=cds-TGC99014.1;Parent=gene-C9F09_05145;Dbxref=NCBI_GP:TGC99014.1;Name=TGC99014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462425.1;locus_tag=C9F09_05145;product=DeoR/GlpR family transcriptional regulator;protein_id=TGC99014.1;transl_table=11 PYKB01000431.1 Genbank gene 2295 3125 . - . ID=gene-C9F09_05150;Name=C9F09_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05150 PYKB01000431.1 Protein Homology CDS 2295 3125 . - 0 ID=cds-TGC99015.1;Parent=gene-C9F09_05150;Dbxref=NCBI_GP:TGC99015.1;Name=TGC99015.1;Note=protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458387.1;locus_tag=C9F09_05150;product=rhomboid family intramembrane serine protease GlpG;protein_id=TGC99015.1;transl_table=11 PYKB01000431.1 Genbank gene 3201 3527 . - . ID=gene-C9F09_05155;Name=C9F09_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05155 PYKB01000431.1 Protein Homology CDS 3201 3527 . - 0 ID=cds-TGC99017.1;Parent=gene-C9F09_05155;Dbxref=NCBI_GP:TGC99017.1;Name=TGC99017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458386.1;locus_tag=C9F09_05155;product=thiosulfate sulfurtransferase;protein_id=TGC99017.1;transl_table=11 PYKB01000431.1 Genbank gene 3726 5234 . + . ID=gene-C9F09_05160;Name=C9F09_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05160 PYKB01000431.1 Protein Homology CDS 3726 5234 . + 0 ID=cds-TGC99016.1;Parent=gene-C9F09_05160;Dbxref=NCBI_GP:TGC99016.1;Name=TGC99016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121613.1;locus_tag=C9F09_05160;product=glycerol-3-phosphate dehydrogenase;protein_id=TGC99016.1;transl_table=11 ##sequence-region PYKB01000885.1 1 5386 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000885.1 Genbank region 1 5386 . + . ID=PYKB01000885.1:1..5386;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000885.1 Genbank gene 1 1723 . - . ID=gene-C9F09_14415;Name=C9F09_14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14415;partial=true;start_range=.,1 PYKB01000885.1 Protein Homology CDS 1 1723 . - 0 ID=cds-TGC90524.1;Parent=gene-C9F09_14415;Dbxref=NCBI_GP:TGC90524.1;Name=TGC90524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313335.1;locus_tag=C9F09_14415;partial=true;product=DEAD/DEAH box helicase;protein_id=TGC90524.1;start_range=.,1;transl_table=11 PYKB01000885.1 Genbank gene 1865 2833 . + . ID=gene-C9F09_14420;Name=C9F09_14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14420 PYKB01000885.1 Protein Homology CDS 1865 2833 . + 0 ID=cds-TGC90525.1;Parent=gene-C9F09_14420;Dbxref=NCBI_GP:TGC90525.1;Name=TGC90525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441751.1;locus_tag=C9F09_14420;product=hypothetical protein;protein_id=TGC90525.1;transl_table=11 PYKB01000885.1 Genbank gene 2949 3905 . - . ID=gene-C9F09_14425;Name=C9F09_14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14425 PYKB01000885.1 Protein Homology CDS 2949 3905 . - 0 ID=cds-TGC90526.1;Parent=gene-C9F09_14425;Dbxref=NCBI_GP:TGC90526.1;Name=TGC90526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458953.1;locus_tag=C9F09_14425;product=GTPase;protein_id=TGC90526.1;transl_table=11 PYKB01000885.1 Genbank gene 3916 4119 . - . ID=gene-C9F09_14430;Name=C9F09_14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14430 PYKB01000885.1 Protein Homology CDS 3916 4119 . - 0 ID=cds-TGC90527.1;Parent=gene-C9F09_14430;Dbxref=NCBI_GP:TGC90527.1;Name=TGC90527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458954.1;locus_tag=C9F09_14430;product=DUF466 domain-containing protein;protein_id=TGC90527.1;transl_table=11 PYKB01000885.1 Genbank gene 4214 5386 . - . ID=gene-C9F09_14435;Name=C9F09_14435;end_range=5386,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14435;partial=true PYKB01000885.1 Protein Homology CDS 4214 5386 . - 0 ID=cds-TGC90528.1;Parent=gene-C9F09_14435;Dbxref=NCBI_GP:TGC90528.1;Name=TGC90528.1;end_range=5386,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458955.1;locus_tag=C9F09_14435;partial=true;product=carbon starvation protein A;protein_id=TGC90528.1;transl_table=11 ##sequence-region PYKB01000867.1 1 5372 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000867.1 Genbank region 1 5372 . + . ID=PYKB01000867.1:1..5372;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000867.1 Genbank gene 1 442 . + . ID=gene-C9F09_14030;Name=C9F09_14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14030;partial=true;start_range=.,1 PYKB01000867.1 Protein Homology CDS 1 442 . + 1 ID=cds-TGC90851.1;Parent=gene-C9F09_14030;Dbxref=NCBI_GP:TGC90851.1;Name=TGC90851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455312.1;locus_tag=C9F09_14030;partial=true;product=iron ABC transporter permease;protein_id=TGC90851.1;start_range=.,1;transl_table=11 PYKB01000867.1 Genbank gene 442 1218 . + . ID=gene-C9F09_14035;Name=C9F09_14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14035 PYKB01000867.1 Protein Homology CDS 442 1218 . + 0 ID=cds-TGC90852.1;Parent=gene-C9F09_14035;Dbxref=NCBI_GP:TGC90852.1;Name=TGC90852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=C9F09_14035;product=ABC transporter ATP-binding protein;protein_id=TGC90852.1;transl_table=11 PYKB01000867.1 Genbank gene 1309 2061 . - . ID=gene-C9F09_14040;Name=C9F09_14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14040 PYKB01000867.1 Protein Homology CDS 1309 2061 . - 0 ID=cds-TGC90853.1;Parent=gene-C9F09_14040;Dbxref=NCBI_GP:TGC90853.1;Name=TGC90853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=C9F09_14040;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=TGC90853.1;transl_table=11 PYKB01000867.1 Genbank gene 2079 2270 . - . ID=gene-C9F09_14045;Name=C9F09_14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14045 PYKB01000867.1 Protein Homology CDS 2079 2270 . - 0 ID=cds-TGC90854.1;Parent=gene-C9F09_14045;Dbxref=NCBI_GP:TGC90854.1;Name=TGC90854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219013.1;locus_tag=C9F09_14045;product=hypothetical protein;protein_id=TGC90854.1;transl_table=11 PYKB01000867.1 Genbank gene 2285 3325 . - . ID=gene-C9F09_14050;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=C9F09_14050 PYKB01000867.1 Protein Homology CDS 2285 3325 . - 0 ID=cds-TGC90855.1;Parent=gene-C9F09_14050;Dbxref=NCBI_GP:TGC90855.1;Name=TGC90855.1;gbkey=CDS;gene=galM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=C9F09_14050;product=galactose-1-epimerase;protein_id=TGC90855.1;transl_table=11 PYKB01000867.1 Genbank gene 3319 4467 . - . ID=gene-C9F09_14055;Name=C9F09_14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14055 PYKB01000867.1 Protein Homology CDS 3319 4467 . - 0 ID=cds-TGC90856.1;Parent=gene-C9F09_14055;Dbxref=NCBI_GP:TGC90856.1;Name=TGC90856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=C9F09_14055;product=galactokinase;protein_id=TGC90856.1;transl_table=11 PYKB01000867.1 Genbank gene 4470 5372 . - . ID=gene-C9F09_14060;Name=C9F09_14060;end_range=5372,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14060;partial=true PYKB01000867.1 Protein Homology CDS 4470 5372 . - 0 ID=cds-TGC90857.1;Parent=gene-C9F09_14060;Dbxref=NCBI_GP:TGC90857.1;Name=TGC90857.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;end_range=5372,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=C9F09_14060;partial=true;product=galactose-1-phosphate uridylyltransferase;protein_id=TGC90857.1;transl_table=11 ##sequence-region PYKB01001012.1 1 5356 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001012.1 Genbank region 1 5356 . + . ID=PYKB01001012.1:1..5356;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001012.1 Genbank gene 1 769 . + . ID=gene-C9F09_16925;Name=C9F09_16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16925;partial=true;start_range=.,1 PYKB01001012.1 Protein Homology CDS 1 769 . + 1 ID=cds-TGC87947.1;Parent=gene-C9F09_16925;Dbxref=NCBI_GP:TGC87947.1;Name=TGC87947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=C9F09_16925;partial=true;product=sigma-54-dependent transcriptional regulator;protein_id=TGC87947.1;start_range=.,1;transl_table=11 PYKB01001012.1 Genbank gene 862 1335 . + . ID=gene-C9F09_16930;Name=C9F09_16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16930 PYKB01001012.1 Protein Homology CDS 862 1335 . + 0 ID=cds-TGC87948.1;Parent=gene-C9F09_16930;Dbxref=NCBI_GP:TGC87948.1;Name=TGC87948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=C9F09_16930;product=zinc ribbon-containing protein;protein_id=TGC87948.1;transl_table=11 PYKB01001012.1 Genbank gene 1374 2369 . - . ID=gene-C9F09_16935;Name=C9F09_16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16935 PYKB01001012.1 Protein Homology CDS 1374 2369 . - 0 ID=cds-TGC87949.1;Parent=gene-C9F09_16935;Dbxref=NCBI_GP:TGC87949.1;Name=TGC87949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=C9F09_16935;product=sel1 repeat family protein;protein_id=TGC87949.1;transl_table=11 PYKB01001012.1 Genbank gene 2494 3201 . + . ID=gene-C9F09_16940;Name=C9F09_16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16940 PYKB01001012.1 Protein Homology CDS 2494 3201 . + 0 ID=cds-TGC87950.1;Parent=gene-C9F09_16940;Dbxref=NCBI_GP:TGC87950.1;Name=TGC87950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=C9F09_16940;product=DUF1266 domain-containing protein;protein_id=TGC87950.1;transl_table=11 PYKB01001012.1 Genbank pseudogene 3198 4631 . + . ID=gene-C9F09_16945;Name=C9F09_16945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16945;pseudo=true PYKB01001012.1 Protein Homology CDS 3198 4631 . + 0 ID=cds-C9F09_16945;Parent=gene-C9F09_16945;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=C9F09_16945;product=J domain-containing protein;pseudo=true;transl_table=11 PYKB01001012.1 Genbank gene 4643 5356 . + . ID=gene-C9F09_16950;Name=C9F09_16950;end_range=5356,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16950;partial=true PYKB01001012.1 Protein Homology CDS 4643 5356 . + 0 ID=cds-TGC87951.1;Parent=gene-C9F09_16950;Dbxref=NCBI_GP:TGC87951.1;Name=TGC87951.1;end_range=5356,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=C9F09_16950;partial=true;product=hypothetical protein;protein_id=TGC87951.1;transl_table=11 ##sequence-region PYKB01000487.1 1 5349 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000487.1 Genbank region 1 5349 . + . ID=PYKB01000487.1:1..5349;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000487.1 Genbank gene 1 1143 . - . ID=gene-C9F09_06090;Name=C9F09_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06090;partial=true;start_range=.,1 PYKB01000487.1 Protein Homology CDS 1 1143 . - 0 ID=cds-TGC97950.1;Parent=gene-C9F09_06090;Dbxref=NCBI_GP:TGC97950.1;Name=TGC97950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455854.1;locus_tag=C9F09_06090;partial=true;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=TGC97950.1;start_range=.,1;transl_table=11 PYKB01000487.1 Genbank gene 1204 1503 . - . ID=gene-C9F09_06095;Name=C9F09_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06095 PYKB01000487.1 Protein Homology CDS 1204 1503 . - 0 ID=cds-TGC97954.1;Parent=gene-C9F09_06095;Dbxref=NCBI_GP:TGC97954.1;Name=TGC97954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=C9F09_06095;product=reverse transcriptase;protein_id=TGC97954.1;transl_table=11 PYKB01000487.1 Genbank gene 1419 1685 . + . ID=gene-C9F09_06100;Name=C9F09_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06100 PYKB01000487.1 Protein Homology CDS 1419 1685 . + 0 ID=cds-TGC97951.1;Parent=gene-C9F09_06100;Dbxref=NCBI_GP:TGC97951.1;Name=TGC97951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455855.4;locus_tag=C9F09_06100;product=DUF333 domain-containing protein;protein_id=TGC97951.1;transl_table=11 PYKB01000487.1 Genbank gene 1729 2139 . - . ID=gene-C9F09_06105;Name=C9F09_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06105 PYKB01000487.1 Protein Homology CDS 1729 2139 . - 0 ID=cds-TGC97952.1;Parent=gene-C9F09_06105;Dbxref=NCBI_GP:TGC97952.1;Name=TGC97952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455856.1;locus_tag=C9F09_06105;product=heat-inducible protein;protein_id=TGC97952.1;transl_table=11 PYKB01000487.1 Genbank gene 2250 3239 . - . ID=gene-C9F09_06110;Name=C9F09_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06110 PYKB01000487.1 Protein Homology CDS 2250 3239 . - 0 ID=cds-TGC97953.1;Parent=gene-C9F09_06110;Dbxref=NCBI_GP:TGC97953.1;Name=TGC97953.1;Note=fermentative%3B catalyzes the formationof pyruvate from lactate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=C9F09_06110;product=2-hydroxyacid dehydrogenase;protein_id=TGC97953.1;transl_table=11 PYKB01000487.1 Genbank pseudogene 3479 5329 . + . ID=gene-C9F09_06115;Name=C9F09_06115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_06115;pseudo=true PYKB01000487.1 Protein Homology CDS 3479 5329 . + 0 ID=cds-C9F09_06115;Parent=gene-C9F09_06115;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455858.1;locus_tag=C9F09_06115;product=YdbH family protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000501.1 1 5315 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000501.1 Genbank region 1 5315 . + . ID=PYKB01000501.1:1..5315;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000501.1 Genbank gene 1 667 . + . ID=gene-C9F09_06420;Name=C9F09_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06420;partial=true;start_range=.,1 PYKB01000501.1 Protein Homology CDS 1 667 . + 1 ID=cds-TGC97630.1;Parent=gene-C9F09_06420;Dbxref=NCBI_GP:TGC97630.1;Name=TGC97630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458028.1;locus_tag=C9F09_06420;partial=true;product=sulfolactaldehyde 3-reductase;protein_id=TGC97630.1;start_range=.,1;transl_table=11 PYKB01000501.1 Genbank gene 690 1568 . + . ID=gene-C9F09_06425;Name=C9F09_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06425 PYKB01000501.1 Protein Homology CDS 690 1568 . + 0 ID=cds-TGC97631.1;Parent=gene-C9F09_06425;Dbxref=NCBI_GP:TGC97631.1;Name=TGC97631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458029.1;locus_tag=C9F09_06425;product=sulfofructosephosphate aldolase;protein_id=TGC97631.1;transl_table=11 PYKB01000501.1 Genbank gene 1584 2825 . + . ID=gene-C9F09_06430;Name=C9F09_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06430 PYKB01000501.1 Protein Homology CDS 1584 2825 . + 0 ID=cds-TGC97632.1;Parent=gene-C9F09_06430;Dbxref=NCBI_GP:TGC97632.1;Name=TGC97632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002415026.1;locus_tag=C9F09_06430;product=sulfoquinovose isomerase;protein_id=TGC97632.1;transl_table=11 PYKB01000501.1 Genbank gene 2912 3799 . + . ID=gene-C9F09_06435;Name=C9F09_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06435 PYKB01000501.1 Protein Homology CDS 2912 3799 . + 0 ID=cds-TGC97633.1;Parent=gene-C9F09_06435;Dbxref=NCBI_GP:TGC97633.1;Name=TGC97633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000555580.1;locus_tag=C9F09_06435;product=aldose-1-epimerase;protein_id=TGC97633.1;transl_table=11 PYKB01000501.1 Genbank gene 3888 4763 . + . ID=gene-C9F09_06440;Name=C9F09_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06440 PYKB01000501.1 Protein Homology CDS 3888 4763 . + 0 ID=cds-TGC97634.1;Parent=gene-C9F09_06440;Dbxref=NCBI_GP:TGC97634.1;Name=TGC97634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312828.1;locus_tag=C9F09_06440;product=sulfite exporter TauE/SafE family protein;protein_id=TGC97634.1;transl_table=11 PYKB01000501.1 Genbank gene 4887 5315 . + . ID=gene-C9F09_06445;Name=C9F09_06445;end_range=5315,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06445;partial=true PYKB01000501.1 Protein Homology CDS 4887 5315 . + 0 ID=cds-TGC97635.1;Parent=gene-C9F09_06445;Dbxref=NCBI_GP:TGC97635.1;Name=TGC97635.1;end_range=5315,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523759.1;locus_tag=C9F09_06445;partial=true;product=alpha-glucosidase;protein_id=TGC97635.1;transl_table=11 ##sequence-region PYKB01001422.1 1 5303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001422.1 Genbank region 1 5303 . + . ID=PYKB01001422.1:1..5303;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001422.1 Genbank pseudogene 1 999 . + . ID=gene-C9F09_24465;Name=C9F09_24465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_24465;pseudo=true PYKB01001422.1 Protein Homology CDS 1 999 . + 1 ID=cds-C9F09_24465;Parent=gene-C9F09_24465;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=C9F09_24465;product=IS3 family transposase;pseudo=true;transl_table=11 PYKB01001422.1 Genbank gene 1049 1708 . - . ID=gene-C9F09_24470;Name=C9F09_24470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24470 PYKB01001422.1 Protein Homology CDS 1049 1708 . - 0 ID=cds-TGC78928.1;Parent=gene-C9F09_24470;Dbxref=NCBI_GP:TGC78928.1;Name=TGC78928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411959.1;locus_tag=C9F09_24470;product=DUF2726 domain-containing protein;protein_id=TGC78928.1;transl_table=11 PYKB01001422.1 Genbank gene 2057 2911 . - . ID=gene-C9F09_24475;Name=C9F09_24475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24475 PYKB01001422.1 Protein Homology CDS 2057 2911 . - 0 ID=cds-TGC78929.1;Parent=gene-C9F09_24475;Dbxref=NCBI_GP:TGC78929.1;Name=TGC78929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012532555.1;locus_tag=C9F09_24475;product=phosphate starvation-inducible protein PhoH;protein_id=TGC78929.1;transl_table=11 PYKB01001422.1 Genbank gene 2824 3120 . - . ID=gene-C9F09_24480;Name=C9F09_24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24480 PYKB01001422.1 Protein Homology CDS 2824 3120 . - 0 ID=cds-TGC78930.1;Parent=gene-C9F09_24480;Dbxref=NCBI_GP:TGC78930.1;Name=TGC78930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000245336.1;locus_tag=C9F09_24480;product=phosphate starvation-inducible protein PhoH;protein_id=TGC78930.1;transl_table=11 PYKB01001422.1 Genbank gene 3738 5228 . - . ID=gene-C9F09_24485;Name=C9F09_24485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24485 PYKB01001422.1 Protein Homology CDS 3738 5228 . - 0 ID=cds-TGC78931.1;Parent=gene-C9F09_24485;Dbxref=NCBI_GP:TGC78931.1;Name=TGC78931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=C9F09_24485;product=sodium/proline symporter PutP;protein_id=TGC78931.1;transl_table=11 ##sequence-region PYKB01001747.1 1 5300 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001747.1 Genbank region 1 5300 . + . ID=PYKB01001747.1:1..5300;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001747.1 Genbank gene 1 448 . - . ID=gene-C9F09_30605;Name=C9F09_30605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30605;partial=true;start_range=.,1 PYKB01001747.1 Protein Homology CDS 1 448 . - 0 ID=cds-TGC70554.1;Parent=gene-C9F09_30605;Dbxref=NCBI_GP:TGC70554.1;Name=TGC70554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456792.1;locus_tag=C9F09_30605;partial=true;product=cytochrome c-type biogenesis protein H1;protein_id=TGC70554.1;start_range=.,1;transl_table=11 PYKB01001747.1 Genbank gene 445 1002 . - . ID=gene-C9F09_30610;Name=C9F09_30610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30610 PYKB01001747.1 Protein Homology CDS 445 1002 . - 0 ID=cds-TGC70555.1;Parent=gene-C9F09_30610;Dbxref=NCBI_GP:TGC70555.1;Name=TGC70555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=C9F09_30610;product=thiol:disulfide interchange protein DsbE;protein_id=TGC70555.1;transl_table=11 PYKB01001747.1 Genbank gene 999 2930 . - . ID=gene-C9F09_30615;Name=C9F09_30615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30615 PYKB01001747.1 Protein Homology CDS 999 2930 . - 0 ID=cds-TGC70556.1;Parent=gene-C9F09_30615;Dbxref=NCBI_GP:TGC70556.1;Name=TGC70556.1;Note=cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456794.1;locus_tag=C9F09_30615;product=heme lyase CcmF/NrfE family subunit;protein_id=TGC70556.1;transl_table=11 PYKB01001747.1 Genbank gene 2927 3406 . - . ID=gene-C9F09_30620;Name=C9F09_30620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30620 PYKB01001747.1 Protein Homology CDS 2927 3406 . - 0 ID=cds-TGC70557.1;Parent=gene-C9F09_30620;Dbxref=NCBI_GP:TGC70557.1;Name=TGC70557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456795.1;locus_tag=C9F09_30620;product=cytochrome c maturation protein CcmE;protein_id=TGC70557.1;transl_table=11 PYKB01001747.1 Genbank gene 3403 3576 . - . ID=gene-C9F09_30625;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=C9F09_30625 PYKB01001747.1 Protein Homology CDS 3403 3576 . - 0 ID=cds-TGC70558.1;Parent=gene-C9F09_30625;Dbxref=NCBI_GP:TGC70558.1;Name=TGC70558.1;gbkey=CDS;gene=ccmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456796.1;locus_tag=C9F09_30625;product=heme exporter protein CcmD;protein_id=TGC70558.1;transl_table=11 PYKB01001747.1 Genbank pseudogene 3615 4349 . - . ID=gene-C9F09_30630;Name=C9F09_30630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_30630;pseudo=true PYKB01001747.1 Protein Homology CDS 3615 4349 . - 0 ID=cds-C9F09_30630;Parent=gene-C9F09_30630;Note=with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456797.1;locus_tag=C9F09_30630;product=heme ABC transporter permease;pseudo=true;transl_table=11 PYKB01001747.1 Genbank gene 4401 5060 . - . ID=gene-C9F09_30635;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=C9F09_30635 PYKB01001747.1 Protein Homology CDS 4401 5060 . - 0 ID=cds-TGC70559.1;Parent=gene-C9F09_30635;Dbxref=NCBI_GP:TGC70559.1;Name=TGC70559.1;gbkey=CDS;gene=ccmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456798.1;locus_tag=C9F09_30635;product=heme exporter protein CcmB;protein_id=TGC70559.1;transl_table=11 PYKB01001747.1 Genbank gene 5057 5300 . - . ID=gene-C9F09_30640;Name=C9F09_30640;end_range=5300,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30640;partial=true PYKB01001747.1 Protein Homology CDS 5057 5300 . - 1 ID=cds-TGC70560.1;Parent=gene-C9F09_30640;Dbxref=NCBI_GP:TGC70560.1;Name=TGC70560.1;end_range=5300,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456799.1;locus_tag=C9F09_30640;partial=true;product=hypothetical protein;protein_id=TGC70560.1;transl_table=11 ##sequence-region PYKB01001646.1 1 5290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001646.1 Genbank region 1 5290 . + . ID=PYKB01001646.1:1..5290;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001646.1 Genbank gene 1 350 . - . ID=gene-C9F09_28730;Name=C9F09_28730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28730;partial=true;start_range=.,1 PYKB01001646.1 Protein Homology CDS 1 350 . - 0 ID=cds-TGC73639.1;Parent=gene-C9F09_28730;Dbxref=NCBI_GP:TGC73639.1;Name=TGC73639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=C9F09_28730;partial=true;product=hypothetical protein;protein_id=TGC73639.1;start_range=.,1;transl_table=11 PYKB01001646.1 Genbank gene 347 661 . - . ID=gene-C9F09_28735;Name=C9F09_28735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28735 PYKB01001646.1 Protein Homology CDS 347 661 . - 0 ID=cds-TGC73640.1;Parent=gene-C9F09_28735;Dbxref=NCBI_GP:TGC73640.1;Name=TGC73640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=C9F09_28735;product=hypothetical protein;protein_id=TGC73640.1;transl_table=11 PYKB01001646.1 Genbank gene 804 1763 . + . ID=gene-C9F09_28740;Name=C9F09_28740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28740 PYKB01001646.1 Protein Homology CDS 804 1763 . + 0 ID=cds-TGC73641.1;Parent=gene-C9F09_28740;Dbxref=NCBI_GP:TGC73641.1;Name=TGC73641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456183.1;locus_tag=C9F09_28740;product=DUF2219 domain-containing protein;protein_id=TGC73641.1;transl_table=11 PYKB01001646.1 Genbank gene 1812 2570 . - . ID=gene-C9F09_28745;Name=C9F09_28745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28745 PYKB01001646.1 Protein Homology CDS 1812 2570 . - 0 ID=cds-TGC73642.1;Parent=gene-C9F09_28745;Dbxref=NCBI_GP:TGC73642.1;Name=TGC73642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=C9F09_28745;product=DUF481 domain-containing protein;protein_id=TGC73642.1;transl_table=11 PYKB01001646.1 Genbank gene 2859 3791 . + . ID=gene-C9F09_28750;Name=C9F09_28750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28750 PYKB01001646.1 Protein Homology CDS 2859 3791 . + 0 ID=cds-TGC73643.1;Parent=gene-C9F09_28750;Dbxref=NCBI_GP:TGC73643.1;Name=TGC73643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=C9F09_28750;product=6-phosphofructokinase II;protein_id=TGC73643.1;transl_table=11 PYKB01001646.1 Genbank gene 3888 4178 . + . ID=gene-C9F09_28755;Name=C9F09_28755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28755 PYKB01001646.1 Protein Homology CDS 3888 4178 . + 0 ID=cds-TGC73644.1;Parent=gene-C9F09_28755;Dbxref=NCBI_GP:TGC73644.1;Name=TGC73644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456186.1;locus_tag=C9F09_28755;product=endoribonuclease GhoS;protein_id=TGC73644.1;transl_table=11 PYKB01001646.1 Genbank gene 4285 5145 . + . ID=gene-C9F09_28760;Name=C9F09_28760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28760 PYKB01001646.1 Protein Homology CDS 4285 5145 . + 0 ID=cds-TGC73645.1;Parent=gene-C9F09_28760;Dbxref=NCBI_GP:TGC73645.1;Name=TGC73645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456187.1;locus_tag=C9F09_28760;product=fructosamine kinase family protein;protein_id=TGC73645.1;transl_table=11 ##sequence-region PYKB01001399.1 1 13072 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001399.1 Genbank region 1 13072 . + . ID=PYKB01001399.1:1..13072;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001399.1 Genbank gene 1 276 . - . ID=gene-C9F09_24005;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=C9F09_24005;partial=true;start_range=.,1 PYKB01001399.1 Protein Homology CDS 1 276 . - 0 ID=cds-TGC79497.1;Parent=gene-C9F09_24005;Dbxref=NCBI_GP:TGC79497.1;Name=TGC79497.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458545.1;locus_tag=C9F09_24005;partial=true;product=alanine racemase;protein_id=TGC79497.1;start_range=.,1;transl_table=11 PYKB01001399.1 Genbank gene 308 1723 . - . ID=gene-C9F09_24010;Name=C9F09_24010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24010 PYKB01001399.1 Protein Homology CDS 308 1723 . - 0 ID=cds-TGC79498.1;Parent=gene-C9F09_24010;Dbxref=NCBI_GP:TGC79498.1;Name=TGC79498.1;Note=unwinds double stranded DNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458544.1;locus_tag=C9F09_24010;product=replicative DNA helicase;protein_id=TGC79498.1;transl_table=11 PYKB01001399.1 Genbank pseudogene 1788 2771 . + . ID=gene-C9F09_24015;Name=C9F09_24015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_24015;pseudo=true PYKB01001399.1 Protein Homology CDS 1788 2771 . + 0 ID=cds-C9F09_24015;Parent=gene-C9F09_24015;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=C9F09_24015;product=quinone oxidoreductase;pseudo=true;transl_table=11 PYKB01001399.1 Genbank gene 2946 3188 . - . ID=gene-C9F09_24020;Name=C9F09_24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24020 PYKB01001399.1 Protein Homology CDS 2946 3188 . - 0 ID=cds-TGC79499.1;Parent=gene-C9F09_24020;Dbxref=NCBI_GP:TGC79499.1;Name=TGC79499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458542.1;locus_tag=C9F09_24020;product=envelope stress response protein PspG;protein_id=TGC79499.1;transl_table=11 PYKB01001399.1 Genbank gene 3356 4354 . - . ID=gene-C9F09_24025;Name=C9F09_24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24025 PYKB01001399.1 Protein Homology CDS 3356 4354 . - 0 ID=cds-TGC79500.1;Parent=gene-C9F09_24025;Dbxref=NCBI_GP:TGC79500.1;Name=TGC79500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=C9F09_24025;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=TGC79500.1;transl_table=11 PYKB01001399.1 Genbank gene 4442 5752 . - . ID=gene-C9F09_24030;Name=C9F09_24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24030 PYKB01001399.1 Protein Homology CDS 4442 5752 . - 0 ID=cds-TGC79501.1;Parent=gene-C9F09_24030;Dbxref=NCBI_GP:TGC79501.1;Name=TGC79501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=C9F09_24030;product=conjugal transfer protein;protein_id=TGC79501.1;transl_table=11 PYKB01001399.1 Genbank gene 5999 6514 . + . ID=gene-C9F09_24035;Name=C9F09_24035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24035 PYKB01001399.1 Protein Homology CDS 5999 6514 . + 0 ID=cds-TGC79502.1;Parent=gene-C9F09_24035;Dbxref=NCBI_GP:TGC79502.1;Name=TGC79502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458539.1;locus_tag=C9F09_24035;product=transcriptional regulator Zur;protein_id=TGC79502.1;transl_table=11 PYKB01001399.1 Genbank gene 6614 6823 . - . ID=gene-C9F09_24040;Name=C9F09_24040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24040 PYKB01001399.1 Protein Homology CDS 6614 6823 . - 0 ID=cds-TGC79503.1;Parent=gene-C9F09_24040;Dbxref=NCBI_GP:TGC79503.1;Name=TGC79503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=C9F09_24040;product=CsbD family protein;protein_id=TGC79503.1;transl_table=11 PYKB01001399.1 Genbank gene 6845 6958 . - . ID=gene-C9F09_24045;Name=C9F09_24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24045 PYKB01001399.1 Protein Homology CDS 6845 6958 . - 0 ID=cds-TGC79508.1;Parent=gene-C9F09_24045;Dbxref=NCBI_GP:TGC79508.1;Name=TGC79508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=C9F09_24045;product=hypothetical protein;protein_id=TGC79508.1;transl_table=11 PYKB01001399.1 Genbank gene 6955 8280 . - . ID=gene-C9F09_24050;Name=C9F09_24050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24050 PYKB01001399.1 Protein Homology CDS 6955 8280 . - 0 ID=cds-TGC79504.1;Parent=gene-C9F09_24050;Dbxref=NCBI_GP:TGC79504.1;Name=TGC79504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=C9F09_24050;product=MATE family efflux transporter DinF;protein_id=TGC79504.1;transl_table=11 PYKB01001399.1 Genbank gene 8459 9067 . - . ID=gene-C9F09_24055;Name=C9F09_24055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24055 PYKB01001399.1 Protein Homology CDS 8459 9067 . - 0 ID=cds-TGC79505.1;Parent=gene-C9F09_24055;Dbxref=NCBI_GP:TGC79505.1;Name=TGC79505.1;Note=Represses a number of genes involved in the response to DNA damage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=C9F09_24055;product=LexA repressor;protein_id=TGC79505.1;transl_table=11 PYKB01001399.1 Genbank gene 9176 9544 . - . ID=gene-C9F09_24060;Name=C9F09_24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24060 PYKB01001399.1 Protein Homology CDS 9176 9544 . - 0 ID=cds-TGC79506.1;Parent=gene-C9F09_24060;Dbxref=NCBI_GP:TGC79506.1;Name=TGC79506.1;Note=catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458534.1;locus_tag=C9F09_24060;product=diacylglycerol kinase;protein_id=TGC79506.1;transl_table=11 PYKB01001399.1 Genbank gene 9715 12135 . + . ID=gene-C9F09_24065;Name=C9F09_24065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24065 PYKB01001399.1 Protein Homology CDS 9715 12135 . + 0 ID=cds-TGC79507.1;Parent=gene-C9F09_24065;Dbxref=NCBI_GP:TGC79507.1;Name=TGC79507.1;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=C9F09_24065;product=glycerol-3-phosphate 1-O-acyltransferase;protein_id=TGC79507.1;transl_table=11 PYKB01001399.1 Genbank pseudogene 12234 13007 . - . ID=gene-C9F09_24070;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=pseudogene;locus_tag=C9F09_24070;pseudo=true PYKB01001399.1 Protein Homology CDS 12234 13007 . - 0 ID=cds-C9F09_24070;Parent=gene-C9F09_24070;Note=catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=ubiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458532.1;locus_tag=C9F09_24070;product=4-hydroxybenzoate octaprenyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKB01001528.1 1 5290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001528.1 Genbank region 1 5290 . + . ID=PYKB01001528.1:1..5290;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001528.1 Genbank gene 1 128 . - . ID=gene-C9F09_26595;Name=C9F09_26595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26595;partial=true;start_range=.,1 PYKB01001528.1 Protein Homology CDS 1 128 . - 0 ID=cds-TGC76505.1;Parent=gene-C9F09_26595;Dbxref=NCBI_GP:TGC76505.1;Name=TGC76505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=C9F09_26595;partial=true;product=sodium:proton antiporter;protein_id=TGC76505.1;start_range=.,1;transl_table=11 PYKB01001528.1 Genbank gene 348 1067 . + . ID=gene-C9F09_26600;Name=C9F09_26600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26600 PYKB01001528.1 Protein Homology CDS 348 1067 . + 0 ID=cds-TGC76506.1;Parent=gene-C9F09_26600;Dbxref=NCBI_GP:TGC76506.1;Name=TGC76506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=C9F09_26600;product=fatty acid metabolism transcriptional regulator FadR;protein_id=TGC76506.1;transl_table=11 PYKB01001528.1 Genbank gene 1114 2646 . - . ID=gene-C9F09_26605;Name=C9F09_26605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26605 PYKB01001528.1 Protein Homology CDS 1114 2646 . - 0 ID=cds-TGC76507.1;Parent=gene-C9F09_26605;Dbxref=NCBI_GP:TGC76507.1;Name=TGC76507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456311.1;locus_tag=C9F09_26605;product=SpoVR family protein;protein_id=TGC76507.1;transl_table=11 PYKB01001528.1 Genbank gene 2969 4267 . + . ID=gene-C9F09_26610;Name=C9F09_26610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26610 PYKB01001528.1 Protein Homology CDS 2969 4267 . + 0 ID=cds-TGC76508.1;Parent=gene-C9F09_26610;Dbxref=NCBI_GP:TGC76508.1;Name=TGC76508.1;Note=catalyzes the oxidative deamination of D-amino acids;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=C9F09_26610;product=D-amino-acid dehydrogenase;protein_id=TGC76508.1;transl_table=11 PYKB01001528.1 Genbank gene 4281 5290 . + . ID=gene-C9F09_26615;Name=alr;end_range=5290,.;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=C9F09_26615;partial=true PYKB01001528.1 Protein Homology CDS 4281 5290 . + 0 ID=cds-TGC76509.1;Parent=gene-C9F09_26615;Dbxref=NCBI_GP:TGC76509.1;Name=TGC76509.1;end_range=5290,.;gbkey=CDS;gene=alr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456309.1;locus_tag=C9F09_26615;partial=true;product=alanine racemase;protein_id=TGC76509.1;transl_table=11 ##sequence-region PYKB01001620.1 1 5287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001620.1 Genbank region 1 5287 . + . ID=PYKB01001620.1:1..5287;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001620.1 Genbank pseudogene 61 897 . - . ID=gene-C9F09_28380;Name=C9F09_28380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28380;pseudo=true PYKB01001620.1 Protein Homology CDS 61 897 . - 0 ID=cds-C9F09_28380;Parent=gene-C9F09_28380;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456849.1;locus_tag=C9F09_28380;product=o-succinylbenzoate synthase;pseudo=true;transl_table=11 PYKB01001620.1 Genbank gene 897 1754 . - . ID=gene-C9F09_28385;Name=C9F09_28385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28385 PYKB01001620.1 Protein Homology CDS 897 1754 . - 0 ID=cds-TGC74425.1;Parent=gene-C9F09_28385;Dbxref=NCBI_GP:TGC74425.1;Name=TGC74425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456850.1;locus_tag=C9F09_28385;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=TGC74425.1;transl_table=11 PYKB01001620.1 Genbank gene 1769 2527 . - . ID=gene-C9F09_28390;Name=C9F09_28390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28390 PYKB01001620.1 Protein Homology CDS 1769 2527 . - 0 ID=cds-TGC74426.1;Parent=gene-C9F09_28390;Dbxref=NCBI_GP:TGC74426.1;Name=TGC74426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=C9F09_28390;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=TGC74426.1;transl_table=11 PYKB01001620.1 Genbank gene 2524 4194 . - . ID=gene-C9F09_28395;Name=C9F09_28395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28395 PYKB01001620.1 Protein Homology CDS 2524 4194 . - 0 ID=cds-TGC74427.1;Parent=gene-C9F09_28395;Dbxref=NCBI_GP:TGC74427.1;Name=TGC74427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=C9F09_28395;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=TGC74427.1;transl_table=11 PYKB01001620.1 Genbank pseudogene 4280 5260 . - . ID=gene-C9F09_28400;Name=C9F09_28400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28400;pseudo=true PYKB01001620.1 Protein Homology CDS 4280 5260 . - 0 ID=cds-C9F09_28400;Parent=gene-C9F09_28400;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456853.1;locus_tag=C9F09_28400;product=isochorismate synthase MenF;pseudo=true;transl_table=11 ##sequence-region PYKB01001327.1 1 5276 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001327.1 Genbank region 1 5276 . + . ID=PYKB01001327.1:1..5276;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001327.1 Genbank gene 1 361 . + . ID=gene-C9F09_22780;Name=C9F09_22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22780;partial=true;start_range=.,1 PYKB01001327.1 Protein Homology CDS 1 361 . + 1 ID=cds-TGC81002.1;Parent=gene-C9F09_22780;Dbxref=NCBI_GP:TGC81002.1;Name=TGC81002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339076.1;locus_tag=C9F09_22780;partial=true;product=EamA family transporter;protein_id=TGC81002.1;start_range=.,1;transl_table=11 PYKB01001327.1 Genbank gene 401 697 . - . ID=gene-C9F09_22785;Name=C9F09_22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22785 PYKB01001327.1 Protein Homology CDS 401 697 . - 0 ID=cds-TGC81003.1;Parent=gene-C9F09_22785;Dbxref=NCBI_GP:TGC81003.1;Name=TGC81003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001170054.1;locus_tag=C9F09_22785;product=hypothetical protein;protein_id=TGC81003.1;transl_table=11 PYKB01001327.1 Genbank gene 872 1252 . + . ID=gene-C9F09_22790;Name=C9F09_22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22790 PYKB01001327.1 Protein Homology CDS 872 1252 . + 0 ID=cds-TGC81004.1;Parent=gene-C9F09_22790;Dbxref=NCBI_GP:TGC81004.1;Name=TGC81004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727015.1;locus_tag=C9F09_22790;product=hypothetical protein;protein_id=TGC81004.1;transl_table=11 PYKB01001327.1 Genbank gene 1300 2250 . - . ID=gene-C9F09_22795;Name=C9F09_22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22795 PYKB01001327.1 Protein Homology CDS 1300 2250 . - 0 ID=cds-TGC81005.1;Parent=gene-C9F09_22795;Dbxref=NCBI_GP:TGC81005.1;Name=TGC81005.1;Note=responsible for the influx of magnesium ions;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=C9F09_22795;product=magnesium transporter CorA;protein_id=TGC81005.1;transl_table=11 PYKB01001327.1 Genbank gene 2487 2672 . + . ID=gene-C9F09_22800;Name=C9F09_22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22800 PYKB01001327.1 Protein Homology CDS 2487 2672 . + 0 ID=cds-TGC81006.1;Parent=gene-C9F09_22800;Dbxref=NCBI_GP:TGC81006.1;Name=TGC81006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219418.1;locus_tag=C9F09_22800;product=hypothetical protein;protein_id=TGC81006.1;transl_table=11 PYKB01001327.1 Genbank gene 2722 4884 . - . ID=gene-C9F09_22805;Name=C9F09_22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22805 PYKB01001327.1 Protein Homology CDS 2722 4884 . - 0 ID=cds-TGC81007.1;Parent=gene-C9F09_22805;Dbxref=NCBI_GP:TGC81007.1;Name=TGC81007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=C9F09_22805;product=DNA helicase II;protein_id=TGC81007.1;transl_table=11 PYKB01001327.1 Genbank gene 5020 5276 . - . ID=gene-C9F09_22810;Name=C9F09_22810;end_range=5276,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22810;partial=true PYKB01001327.1 Protein Homology CDS 5020 5276 . - 2 ID=cds-TGC81008.1;Parent=gene-C9F09_22810;Dbxref=NCBI_GP:TGC81008.1;Name=TGC81008.1;end_range=5276,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457801.1;locus_tag=C9F09_22810;partial=true;product=hypothetical protein;protein_id=TGC81008.1;transl_table=11 ##sequence-region PYKB01000436.1 1 5262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000436.1 Genbank region 1 5262 . + . ID=PYKB01000436.1:1..5262;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000436.1 Genbank pseudogene 132 479 . + . ID=gene-C9F09_05245;Name=C9F09_05245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05245;pseudo=true PYKB01000436.1 Protein Homology CDS 132 479 . + 0 ID=cds-C9F09_05245;Parent=gene-C9F09_05245;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458762.1;locus_tag=C9F09_05245;product=divalent cation tolerance protein CutA;pseudo=true;transl_table=11 PYKB01000436.1 Genbank pseudogene 455 910 . + . ID=gene-C9F09_05250;Name=dipZ;gbkey=Gene;gene=dipZ;gene_biotype=pseudogene;locus_tag=C9F09_05250;pseudo=true PYKB01000436.1 Protein Homology CDS 455 910 . + 0 ID=cds-C9F09_05250;Parent=gene-C9F09_05250;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=dipZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458761.1;locus_tag=C9F09_05250;product=protein-disulfide reductase DsbD;pseudo=true;transl_table=11 PYKB01000436.1 Genbank pseudogene 907 1653 . - . ID=gene-C9F09_05255;Name=C9F09_05255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05255;pseudo=true PYKB01000436.1 Protein Homology CDS 907 1653 . - 0 ID=cds-C9F09_05255;Parent=gene-C9F09_05255;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455676.1;locus_tag=C9F09_05255;product=flagellar hook-associated protein FlgK;pseudo=true;transl_table=11 PYKB01000436.1 Genbank gene 1718 2668 . - . ID=gene-C9F09_05260;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=C9F09_05260 PYKB01000436.1 Protein Homology CDS 1718 2668 . - 0 ID=cds-TGC98883.1;Parent=gene-C9F09_05260;Dbxref=NCBI_GP:TGC98883.1;Name=TGC98883.1;Note=Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space;gbkey=CDS;gene=flgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455675.1;locus_tag=C9F09_05260;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=TGC98883.1;transl_table=11 PYKB01000436.1 Genbank gene 2668 3765 . - . ID=gene-C9F09_05265;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=C9F09_05265 PYKB01000436.1 Protein Homology CDS 2668 3765 . - 0 ID=cds-TGC98884.1;Parent=gene-C9F09_05265;Dbxref=NCBI_GP:TGC98884.1;Name=TGC98884.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum;gbkey=CDS;gene=flgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=C9F09_05265;product=flagellar P-ring protein;protein_id=TGC98884.1;transl_table=11 PYKB01000436.1 Genbank gene 3777 4475 . - . ID=gene-C9F09_05270;Name=C9F09_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05270 PYKB01000436.1 Protein Homology CDS 3777 4475 . - 0 ID=cds-TGC98885.1;Parent=gene-C9F09_05270;Dbxref=NCBI_GP:TGC98885.1;Name=TGC98885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455673.1;locus_tag=C9F09_05270;product=flagellar basal body L-ring protein FlgH;protein_id=TGC98885.1;transl_table=11 PYKB01000436.1 Genbank pseudogene 4530 5171 . - . ID=gene-C9F09_05275;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=pseudogene;locus_tag=C9F09_05275;pseudo=true PYKB01000436.1 Protein Homology CDS 4530 5171 . - 0 ID=cds-C9F09_05275;Parent=gene-C9F09_05275;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=flgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455672.1;locus_tag=C9F09_05275;product=flagellar basal-body rod protein FlgG;pseudo=true;transl_table=11 ##sequence-region PYKB01001151.1 1 5259 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001151.1 Genbank region 1 5259 . + . ID=PYKB01001151.1:1..5259;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001151.1 Genbank gene 1 466 . + . ID=gene-C9F09_19440;Name=C9F09_19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19440;partial=true;start_range=.,1 PYKB01001151.1 Protein Homology CDS 1 466 . + 1 ID=cds-TGC84681.1;Parent=gene-C9F09_19440;Dbxref=NCBI_GP:TGC84681.1;Name=TGC84681.1;Note=catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=C9F09_19440;partial=true;product=undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=TGC84681.1;start_range=.,1;transl_table=11 PYKB01001151.1 Genbank gene 478 1524 . + . ID=gene-C9F09_19445;Name=C9F09_19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19445 PYKB01001151.1 Protein Homology CDS 478 1524 . + 0 ID=cds-TGC84682.1;Parent=gene-C9F09_19445;Dbxref=NCBI_GP:TGC84682.1;Name=TGC84682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=C9F09_19445;product=LPS biosynthesis protein;protein_id=TGC84682.1;transl_table=11 PYKB01001151.1 Genbank gene 1580 2710 . + . ID=gene-C9F09_19450;Name=C9F09_19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19450 PYKB01001151.1 Protein Homology CDS 1580 2710 . + 0 ID=cds-TGC84683.1;Parent=gene-C9F09_19450;Dbxref=NCBI_GP:TGC84683.1;Name=TGC84683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=C9F09_19450;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=TGC84683.1;transl_table=11 PYKB01001151.1 Genbank gene 2707 3969 . + . ID=gene-C9F09_19455;Name=C9F09_19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19455 PYKB01001151.1 Protein Homology CDS 2707 3969 . + 0 ID=cds-TGC84684.1;Parent=gene-C9F09_19455;Dbxref=NCBI_GP:TGC84684.1;Name=TGC84684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457826.1;locus_tag=C9F09_19455;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=TGC84684.1;transl_table=11 PYKB01001151.1 Genbank gene 3969 5036 . + . ID=gene-C9F09_19460;Name=C9F09_19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19460 PYKB01001151.1 Protein Homology CDS 3969 5036 . + 0 ID=cds-TGC84685.1;Parent=gene-C9F09_19460;Dbxref=NCBI_GP:TGC84685.1;Name=TGC84685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457825.1;locus_tag=C9F09_19460;product=dTDP-glucose 4%2C6-dehydratase;protein_id=TGC84685.1;transl_table=11 PYKB01001151.1 Genbank gene 5069 5259 . + . ID=gene-C9F09_19465;Name=C9F09_19465;end_range=5259,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19465;partial=true PYKB01001151.1 Protein Homology CDS 5069 5259 . + 0 ID=cds-TGC84686.1;Parent=gene-C9F09_19465;Dbxref=NCBI_GP:TGC84686.1;Name=TGC84686.1;end_range=5259,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462813.1;locus_tag=C9F09_19465;partial=true;product=glucose-1-phosphate thymidylyltransferase;protein_id=TGC84686.1;transl_table=11 ##sequence-region PYKB01000838.1 1 5224 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000838.1 Genbank region 1 5224 . + . ID=PYKB01000838.1:1..5224;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000838.1 Genbank gene 1 295 . + . ID=gene-C9F09_13240;Name=C9F09_13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13240;partial=true;start_range=.,1 PYKB01000838.1 Protein Homology CDS 1 295 . + 1 ID=cds-TGC91485.1;Parent=gene-C9F09_13240;Dbxref=NCBI_GP:TGC91485.1;Name=TGC91485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=C9F09_13240;partial=true;product=hypothetical protein;protein_id=TGC91485.1;start_range=.,1;transl_table=11 PYKB01000838.1 Genbank gene 340 795 . + . ID=gene-C9F09_13245;Name=C9F09_13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13245 PYKB01000838.1 Protein Homology CDS 340 795 . + 0 ID=cds-TGC91486.1;Parent=gene-C9F09_13245;Dbxref=NCBI_GP:TGC91486.1;Name=TGC91486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=C9F09_13245;product=HIT family protein;protein_id=TGC91486.1;transl_table=11 PYKB01000838.1 Genbank gene 953 1147 . - . ID=gene-C9F09_13250;Name=C9F09_13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13250 PYKB01000838.1 Protein Homology CDS 953 1147 . - 0 ID=cds-TGC91487.1;Parent=gene-C9F09_13250;Dbxref=NCBI_GP:TGC91487.1;Name=TGC91487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000525381.1;locus_tag=C9F09_13250;product=hypothetical protein;protein_id=TGC91487.1;transl_table=11 PYKB01000838.1 Genbank gene 1350 3521 . - . ID=gene-C9F09_13255;Name=C9F09_13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13255 PYKB01000838.1 Protein Homology CDS 1350 3521 . - 0 ID=cds-TGC91488.1;Parent=gene-C9F09_13255;Dbxref=NCBI_GP:TGC91488.1;Name=TGC91488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=C9F09_13255;product=YgiQ family radical SAM protein;protein_id=TGC91488.1;transl_table=11 PYKB01000838.1 Genbank pseudogene 4010 4992 . + . ID=gene-C9F09_13260;Name=C9F09_13260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13260;pseudo=true PYKB01000838.1 Protein Homology CDS 4010 4992 . + 0 ID=cds-C9F09_13260;Parent=gene-C9F09_13260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462084.1;locus_tag=C9F09_13260;product=C4-dicarboxylate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 PYKB01000838.1 Genbank gene 5034 5224 . + . ID=gene-C9F09_13265;Name=C9F09_13265;end_range=5224,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13265;partial=true PYKB01000838.1 Protein Homology CDS 5034 5224 . + 0 ID=cds-TGC91489.1;Parent=gene-C9F09_13265;Dbxref=NCBI_GP:TGC91489.1;Name=TGC91489.1;end_range=5224,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462085.1;locus_tag=C9F09_13265;partial=true;product=TRAP transporter small permease;protein_id=TGC91489.1;transl_table=11 ##sequence-region PYKB01001188.1 1 5214 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001188.1 Genbank region 1 5214 . + . ID=PYKB01001188.1:1..5214;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001188.1 Genbank gene 1 139 . - . ID=gene-C9F09_20190;Name=C9F09_20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20190;partial=true;start_range=.,1 PYKB01001188.1 Protein Homology CDS 1 139 . - 0 ID=cds-TGC83778.1;Parent=gene-C9F09_20190;Dbxref=NCBI_GP:TGC83778.1;Name=TGC83778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458942.1;locus_tag=C9F09_20190;partial=true;product=DUF445 domain-containing protein;protein_id=TGC83778.1;start_range=.,1;transl_table=11 PYKB01001188.1 Genbank gene 226 1467 . - . ID=gene-C9F09_20195;Name=C9F09_20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20195 PYKB01001188.1 Protein Homology CDS 226 1467 . - 0 ID=cds-TGC83779.1;Parent=gene-C9F09_20195;Dbxref=NCBI_GP:TGC83779.1;Name=TGC83779.1;Note=is involved in resistance to acriflavine%2C chloramphenicol%2C norfloxacin%2C ethidium bromide and TPP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458943.1;locus_tag=C9F09_20195;product=MFS transporter;protein_id=TGC83779.1;transl_table=11 PYKB01001188.1 Genbank gene 1946 2899 . + . ID=gene-C9F09_20200;Name=C9F09_20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20200 PYKB01001188.1 Protein Homology CDS 1946 2899 . + 0 ID=cds-TGC83780.1;Parent=gene-C9F09_20200;Dbxref=NCBI_GP:TGC83780.1;Name=TGC83780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147726.1;locus_tag=C9F09_20200;product=hypothetical protein;protein_id=TGC83780.1;transl_table=11 PYKB01001188.1 Genbank gene 3080 4450 . + . ID=gene-C9F09_20205;Name=C9F09_20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20205 PYKB01001188.1 Protein Homology CDS 3080 4450 . + 0 ID=cds-TGC83781.1;Parent=gene-C9F09_20205;Dbxref=NCBI_GP:TGC83781.1;Name=TGC83781.1;Note=in Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331412.1;locus_tag=C9F09_20205;product=succinate-semialdehyde dehydrogenase;protein_id=TGC83781.1;transl_table=11 PYKB01001188.1 Genbank gene 4546 4689 . - . ID=gene-C9F09_20210;Name=C9F09_20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20210 PYKB01001188.1 Protein Homology CDS 4546 4689 . - 0 ID=cds-TGC83782.1;Parent=gene-C9F09_20210;Dbxref=NCBI_GP:TGC83782.1;Name=TGC83782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=C9F09_20210;product=hypothetical protein;protein_id=TGC83782.1;transl_table=11 PYKB01001188.1 Genbank gene 4656 4820 . + . ID=gene-C9F09_20215;Name=C9F09_20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20215 PYKB01001188.1 Protein Homology CDS 4656 4820 . + 0 ID=cds-TGC83783.1;Parent=gene-C9F09_20215;Dbxref=NCBI_GP:TGC83783.1;Name=TGC83783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=C9F09_20215;product=DUF1127 domain-containing protein;protein_id=TGC83783.1;transl_table=11 PYKB01001188.1 Genbank gene 4897 5214 . - . ID=gene-C9F09_20220;Name=C9F09_20220;end_range=5214,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20220;partial=true PYKB01001188.1 Protein Homology CDS 4897 5214 . - 0 ID=cds-TGC83784.1;Parent=gene-C9F09_20220;Dbxref=NCBI_GP:TGC83784.1;Name=TGC83784.1;end_range=5214,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280241.1;locus_tag=C9F09_20220;partial=true;product=DUF91 domain-containing protein;protein_id=TGC83784.1;transl_table=11 ##sequence-region PYKB01000857.1 1 5206 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000857.1 Genbank region 1 5206 . + . ID=PYKB01000857.1:1..5206;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000857.1 Genbank gene 1 587 . + . ID=gene-C9F09_13665;Name=C9F09_13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13665;partial=true;start_range=.,1 PYKB01000857.1 Protein Homology CDS 1 587 . + 2 ID=cds-TGC91105.1;Parent=gene-C9F09_13665;Dbxref=NCBI_GP:TGC91105.1;Name=TGC91105.1;Note=decatenates replicating daughter chromosomes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456214.1;locus_tag=C9F09_13665;partial=true;product=DNA topoisomerase III;protein_id=TGC91105.1;start_range=.,1;transl_table=11 PYKB01000857.1 Genbank gene 617 1960 . - . ID=gene-C9F09_13670;Name=C9F09_13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13670 PYKB01000857.1 Protein Homology CDS 617 1960 . - 0 ID=cds-TGC91106.1;Parent=gene-C9F09_13670;Dbxref=NCBI_GP:TGC91106.1;Name=TGC91106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013366584.1;locus_tag=C9F09_13670;product=NADP-specific glutamate dehydrogenase;protein_id=TGC91106.1;transl_table=11 PYKB01000857.1 Genbank gene 2199 2474 . + . ID=gene-C9F09_13675;Name=C9F09_13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13675 PYKB01000857.1 Protein Homology CDS 2199 2474 . + 0 ID=cds-TGC91107.1;Parent=gene-C9F09_13675;Dbxref=NCBI_GP:TGC91107.1;Name=TGC91107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456212.1;locus_tag=C9F09_13675;product=DUF1496 domain-containing protein;protein_id=TGC91107.1;transl_table=11 PYKB01000857.1 Genbank gene 2434 2850 . - . ID=gene-C9F09_13680;Name=C9F09_13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13680 PYKB01000857.1 Protein Homology CDS 2434 2850 . - 0 ID=cds-TGC91108.1;Parent=gene-C9F09_13680;Dbxref=NCBI_GP:TGC91108.1;Name=TGC91108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456211.1;locus_tag=C9F09_13680;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=TGC91108.1;transl_table=11 PYKB01000857.1 Genbank gene 2923 3729 . - . ID=gene-C9F09_13685;Name=C9F09_13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13685 PYKB01000857.1 Protein Homology CDS 2923 3729 . - 0 ID=cds-TGC91109.1;Parent=gene-C9F09_13685;Dbxref=NCBI_GP:TGC91109.1;Name=TGC91109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456210.1;locus_tag=C9F09_13685;product=exodeoxyribonuclease III;protein_id=TGC91109.1;transl_table=11 PYKB01000857.1 Genbank gene 3864 4043 . + . ID=gene-C9F09_13690;Name=C9F09_13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13690 PYKB01000857.1 Protein Homology CDS 3864 4043 . + 0 ID=cds-TGC91110.1;Parent=gene-C9F09_13690;Dbxref=NCBI_GP:TGC91110.1;Name=TGC91110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341064.1;locus_tag=C9F09_13690;product=hypothetical protein;protein_id=TGC91110.1;transl_table=11 PYKB01000857.1 Genbank gene 4175 5206 . + . ID=gene-C9F09_13695;Name=C9F09_13695;end_range=5206,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13695;partial=true PYKB01000857.1 Protein Homology CDS 4175 5206 . + 0 ID=cds-TGC91111.1;Parent=gene-C9F09_13695;Dbxref=NCBI_GP:TGC91111.1;Name=TGC91111.1;Note=catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate%3B also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate;end_range=5206,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=C9F09_13695;partial=true;product=aspartate aminotransferase family protein;protein_id=TGC91111.1;transl_table=11 ##sequence-region PYKB01000973.1 1 5183 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000973.1 Genbank region 1 5183 . + . ID=PYKB01000973.1:1..5183;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000973.1 Genbank gene 1 1784 . - . ID=gene-C9F09_16095;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=C9F09_16095;partial=true;start_range=.,1 PYKB01000973.1 Protein Homology CDS 1 1784 . - 0 ID=cds-TGC88811.1;Parent=gene-C9F09_16095;Dbxref=NCBI_GP:TGC88811.1;Name=TGC88811.1;gbkey=CDS;gene=fusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=C9F09_16095;partial=true;product=elongation factor G;protein_id=TGC88811.1;start_range=.,1;transl_table=11 PYKB01000973.1 Genbank gene 1881 2351 . - . ID=gene-C9F09_16100;Name=C9F09_16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16100 PYKB01000973.1 Protein Homology CDS 1881 2351 . - 0 ID=cds-TGC88812.1;Parent=gene-C9F09_16100;Dbxref=NCBI_GP:TGC88812.1;Name=TGC88812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006714698.1;locus_tag=C9F09_16100;product=30S ribosomal protein S7;protein_id=TGC88812.1;transl_table=11 PYKB01000973.1 Genbank gene 2447 2821 . - . ID=gene-C9F09_16105;Name=C9F09_16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16105 PYKB01000973.1 Protein Homology CDS 2447 2821 . - 0 ID=cds-TGC88813.1;Parent=gene-C9F09_16105;Dbxref=NCBI_GP:TGC88813.1;Name=TGC88813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312220.1;locus_tag=C9F09_16105;product=30S ribosomal protein S12;protein_id=TGC88813.1;transl_table=11 PYKB01000973.1 Genbank gene 2947 3234 . - . ID=gene-C9F09_16110;Name=C9F09_16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16110 PYKB01000973.1 Protein Homology CDS 2947 3234 . - 0 ID=cds-TGC88814.1;Parent=gene-C9F09_16110;Dbxref=NCBI_GP:TGC88814.1;Name=TGC88814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458451.1;locus_tag=C9F09_16110;product=sulfurtransferase TusB;protein_id=TGC88814.1;transl_table=11 PYKB01000973.1 Genbank gene 3242 3598 . - . ID=gene-C9F09_16115;Name=C9F09_16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16115 PYKB01000973.1 Protein Homology CDS 3242 3598 . - 0 ID=cds-TGC88815.1;Parent=gene-C9F09_16115;Dbxref=NCBI_GP:TGC88815.1;Name=TGC88815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458450.1;locus_tag=C9F09_16115;product=sulfurtransferase complex subunit TusC;protein_id=TGC88815.1;transl_table=11 PYKB01000973.1 Genbank gene 3598 3984 . - . ID=gene-C9F09_16120;Name=C9F09_16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16120 PYKB01000973.1 Protein Homology CDS 3598 3984 . - 0 ID=cds-TGC88816.1;Parent=gene-C9F09_16120;Dbxref=NCBI_GP:TGC88816.1;Name=TGC88816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458449.1;locus_tag=C9F09_16120;product=sulfurtransferase TusD;protein_id=TGC88816.1;transl_table=11 PYKB01000973.1 Genbank gene 3984 4706 . - . ID=gene-C9F09_16125;Name=C9F09_16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16125 PYKB01000973.1 Protein Homology CDS 3984 4706 . - 0 ID=cds-TGC88817.1;Parent=gene-C9F09_16125;Dbxref=NCBI_GP:TGC88817.1;Name=TGC88817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458448.1;locus_tag=C9F09_16125;product=hypothetical protein;protein_id=TGC88817.1;transl_table=11 PYKB01000973.1 Genbank gene 4983 5183 . - . ID=gene-C9F09_16130;Name=C9F09_16130;end_range=5183,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16130;partial=true PYKB01000973.1 Protein Homology CDS 4983 5183 . - 0 ID=cds-TGC88818.1;Parent=gene-C9F09_16130;Dbxref=NCBI_GP:TGC88818.1;Name=TGC88818.1;Note=rotamase;end_range=5183,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458447.1;locus_tag=C9F09_16130;partial=true;product=FKBP-type peptidyl-prolyl cis-trans isomerase FkpA;protein_id=TGC88818.1;transl_table=11 ##sequence-region PYKB01001604.1 1 5182 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001604.1 Genbank region 1 5182 . + . ID=PYKB01001604.1:1..5182;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001604.1 Genbank gene 1 528 . + . ID=gene-C9F09_28130;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=C9F09_28130;partial=true;start_range=.,1 PYKB01001604.1 Protein Homology CDS 1 528 . + 0 ID=cds-TGC74752.1;Parent=gene-C9F09_28130;Dbxref=NCBI_GP:TGC74752.1;Name=TGC74752.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=C9F09_28130;partial=true;product=EF-P beta-lysylation protein EpmB;protein_id=TGC74752.1;start_range=.,1;transl_table=11 PYKB01001604.1 Genbank gene 810 1667 . + . ID=gene-C9F09_28135;Name=C9F09_28135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28135 PYKB01001604.1 Protein Homology CDS 810 1667 . + 0 ID=cds-TGC74753.1;Parent=gene-C9F09_28135;Dbxref=NCBI_GP:TGC74753.1;Name=TGC74753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=C9F09_28135;product=hypothetical protein;protein_id=TGC74753.1;transl_table=11 PYKB01001604.1 Genbank gene 1715 2068 . - . ID=gene-C9F09_28140;Name=C9F09_28140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28140 PYKB01001604.1 Protein Homology CDS 1715 2068 . - 0 ID=cds-TGC74754.1;Parent=gene-C9F09_28140;Dbxref=NCBI_GP:TGC74754.1;Name=TGC74754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463195.2;locus_tag=C9F09_28140;product=DUF4156 domain-containing protein;protein_id=TGC74754.1;transl_table=11 PYKB01001604.1 Genbank gene 2312 3958 . - . ID=gene-C9F09_28145;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=C9F09_28145 PYKB01001604.1 Protein Homology CDS 2312 3958 . - 0 ID=cds-TGC74755.1;Parent=gene-C9F09_28145;Dbxref=NCBI_GP:TGC74755.1;Name=TGC74755.1;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=C9F09_28145;product=chaperonin GroEL;protein_id=TGC74755.1;transl_table=11 PYKB01001604.1 Genbank gene 4002 4295 . - . ID=gene-C9F09_28150;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=C9F09_28150 PYKB01001604.1 Protein Homology CDS 4002 4295 . - 0 ID=cds-TGC74756.1;Parent=gene-C9F09_28150;Dbxref=NCBI_GP:TGC74756.1;Name=TGC74756.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=C9F09_28150;product=co-chaperone GroES;protein_id=TGC74756.1;transl_table=11 PYKB01001604.1 Genbank gene 4571 5182 . + . ID=gene-C9F09_28155;Name=C9F09_28155;end_range=5182,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28155;partial=true PYKB01001604.1 Protein Homology CDS 4571 5182 . + 0 ID=cds-TGC74757.1;Parent=gene-C9F09_28155;Dbxref=NCBI_GP:TGC74757.1;Name=TGC74757.1;end_range=5182,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=C9F09_28155;partial=true;product=L-methionine/branched-chain amino acid transporter;protein_id=TGC74757.1;transl_table=11 ##sequence-region PYKB01000993.1 1 13020 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000993.1 Genbank region 1 13020 . + . ID=PYKB01000993.1:1..13020;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000993.1 Genbank gene 85 1881 . - . ID=gene-C9F09_16545;Name=C9F09_16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16545 PYKB01000993.1 Protein Homology CDS 85 1881 . - 0 ID=cds-TGC88327.1;Parent=gene-C9F09_16545;Dbxref=NCBI_GP:TGC88327.1;Name=TGC88327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457583.1;locus_tag=C9F09_16545;product=aryl-sulfate sulfotransferase;protein_id=TGC88327.1;transl_table=11 PYKB01000993.1 Genbank gene 2281 2457 . + . ID=gene-C9F09_16550;Name=C9F09_16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16550 PYKB01000993.1 Protein Homology CDS 2281 2457 . + 0 ID=cds-TGC88328.1;Parent=gene-C9F09_16550;Dbxref=NCBI_GP:TGC88328.1;Name=TGC88328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991996.1;locus_tag=C9F09_16550;product=DUF4051 domain-containing protein;protein_id=TGC88328.1;transl_table=11 PYKB01000993.1 Genbank gene 2524 3297 . - . ID=gene-C9F09_16555;Name=C9F09_16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16555 PYKB01000993.1 Protein Homology CDS 2524 3297 . - 0 ID=cds-TGC88329.1;Parent=gene-C9F09_16555;Dbxref=NCBI_GP:TGC88329.1;Name=TGC88329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457582.1;locus_tag=C9F09_16555;product=zinc transporter ZupT;protein_id=TGC88329.1;transl_table=11 PYKB01000993.1 Genbank gene 3396 4226 . + . ID=gene-C9F09_16560;Name=C9F09_16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16560 PYKB01000993.1 Protein Homology CDS 3396 4226 . + 0 ID=cds-TGC88330.1;Parent=gene-C9F09_16560;Dbxref=NCBI_GP:TGC88330.1;Name=TGC88330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462104.1;locus_tag=C9F09_16560;product=4%2C5-DOPA dioxygenase extradiol;protein_id=TGC88330.1;transl_table=11 PYKB01000993.1 Genbank gene 4287 5450 . - . ID=gene-C9F09_16565;Name=C9F09_16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16565 PYKB01000993.1 Protein Homology CDS 4287 5450 . - 0 ID=cds-TGC88331.1;Parent=gene-C9F09_16565;Dbxref=NCBI_GP:TGC88331.1;Name=TGC88331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457580.1;locus_tag=C9F09_16565;product=glutathionylspermidine synthase family protein;protein_id=TGC88331.1;transl_table=11 PYKB01000993.1 Genbank gene 5456 6127 . - . ID=gene-C9F09_16570;Name=C9F09_16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16570 PYKB01000993.1 Protein Homology CDS 5456 6127 . - 0 ID=cds-TGC88332.1;Parent=gene-C9F09_16570;Dbxref=NCBI_GP:TGC88332.1;Name=TGC88332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457579.1;locus_tag=C9F09_16570;product=DUF1190 domain-containing protein;protein_id=TGC88332.1;transl_table=11 PYKB01000993.1 Genbank pseudogene 6015 6267 . - . ID=gene-C9F09_16575;Name=C9F09_16575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16575;pseudo=true PYKB01000993.1 Protein Homology CDS 6015 6267 . - 0 ID=cds-C9F09_16575;Parent=gene-C9F09_16575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311951.1;locus_tag=C9F09_16575;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000993.1 Genbank gene 6340 7815 . - . ID=gene-C9F09_16580;Name=C9F09_16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16580 PYKB01000993.1 Protein Homology CDS 6340 7815 . - 0 ID=cds-TGC88333.1;Parent=gene-C9F09_16580;Dbxref=NCBI_GP:TGC88333.1;Name=TGC88333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457578.3;locus_tag=C9F09_16580;product=outer membrane channel protein TolC;protein_id=TGC88333.1;transl_table=11 PYKB01000993.1 Genbank gene 8016 8648 . + . ID=gene-C9F09_16585;Name=C9F09_16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16585 PYKB01000993.1 Protein Homology CDS 8016 8648 . + 0 ID=cds-TGC88334.1;Parent=gene-C9F09_16585;Dbxref=NCBI_GP:TGC88334.1;Name=TGC88334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457577.1;locus_tag=C9F09_16585;product=ADP-ribose diphosphatase;protein_id=TGC88334.1;transl_table=11 PYKB01000993.1 Genbank gene 8645 9067 . + . ID=gene-C9F09_16590;Name=C9F09_16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16590 PYKB01000993.1 Protein Homology CDS 8645 9067 . + 0 ID=cds-TGC88335.1;Parent=gene-C9F09_16590;Dbxref=NCBI_GP:TGC88335.1;Name=TGC88335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457576.1;locus_tag=C9F09_16590;product=hypothetical protein;protein_id=TGC88335.1;transl_table=11 PYKB01000993.1 Genbank gene 9092 9919 . + . ID=gene-C9F09_16595;Name=C9F09_16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16595 PYKB01000993.1 Protein Homology CDS 9092 9919 . + 0 ID=cds-TGC88336.1;Parent=gene-C9F09_16595;Dbxref=NCBI_GP:TGC88336.1;Name=TGC88336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=C9F09_16595;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=TGC88336.1;transl_table=11 PYKB01000993.1 Genbank gene 9919 10500 . + . ID=gene-C9F09_16600;Name=C9F09_16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16600 PYKB01000993.1 Protein Homology CDS 9919 10500 . + 0 ID=cds-TGC88337.1;Parent=gene-C9F09_16600;Dbxref=NCBI_GP:TGC88337.1;Name=TGC88337.1;Note=Displays esterase activity toward palmitoyl-CoA and pNP-butyrate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457574.1;locus_tag=C9F09_16600;product=esterase YqiA;protein_id=TGC88337.1;transl_table=11 PYKB01000993.1 Genbank gene 10528 12420 . + . ID=gene-C9F09_16605;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=C9F09_16605 PYKB01000993.1 Protein Homology CDS 10528 12420 . + 0 ID=cds-TGC88338.1;Parent=gene-C9F09_16605;Dbxref=NCBI_GP:TGC88338.1;Name=TGC88338.1;gbkey=CDS;gene=parE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457573.1;locus_tag=C9F09_16605;product=DNA topoisomerase IV subunit B;protein_id=TGC88338.1;transl_table=11 PYKB01000993.1 Genbank gene 12545 12859 . - . ID=gene-C9F09_16610;Name=C9F09_16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16610 PYKB01000993.1 Protein Homology CDS 12545 12859 . - 0 ID=cds-TGC88339.1;Parent=gene-C9F09_16610;Dbxref=NCBI_GP:TGC88339.1;Name=TGC88339.1;Note=catalyzes the oxidation of menadiol to menadione;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457572.1;locus_tag=C9F09_16610;product=antibiotic biosynthesis monooxygenase;protein_id=TGC88339.1;transl_table=11 PYKB01000993.1 Genbank gene 12891 13020 . - . ID=gene-C9F09_16615;Name=C9F09_16615;end_range=13020,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16615;partial=true PYKB01000993.1 Protein Homology CDS 12891 13020 . - 1 ID=cds-TGC88340.1;Parent=gene-C9F09_16615;Dbxref=NCBI_GP:TGC88340.1;Name=TGC88340.1;Note=involved in drug resistance;end_range=13020,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=C9F09_16615;partial=true;product=NADPH quinone reductase MdaB;protein_id=TGC88340.1;transl_table=11 ##sequence-region PYKB01001552.1 1 5174 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001552.1 Genbank region 1 5174 . + . ID=PYKB01001552.1:1..5174;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001552.1 Genbank gene 1 636 . + . ID=gene-C9F09_27105;Name=C9F09_27105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27105;partial=true;start_range=.,1 PYKB01001552.1 Protein Homology CDS 1 636 . + 0 ID=cds-TGC75979.1;Parent=gene-C9F09_27105;Dbxref=NCBI_GP:TGC75979.1;Name=TGC75979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=C9F09_27105;partial=true;product=hypothetical protein;protein_id=TGC75979.1;start_range=.,1;transl_table=11 PYKB01001552.1 Genbank gene 1028 2137 . + . ID=gene-C9F09_27110;Name=C9F09_27110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27110 PYKB01001552.1 Protein Homology CDS 1028 2137 . + 0 ID=cds-TGC75980.1;Parent=gene-C9F09_27110;Dbxref=NCBI_GP:TGC75980.1;Name=TGC75980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=C9F09_27110;product=hypothetical protein;protein_id=TGC75980.1;transl_table=11 PYKB01001552.1 Genbank gene 2351 2587 . - . ID=gene-C9F09_27115;Name=C9F09_27115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27115 PYKB01001552.1 Protein Homology CDS 2351 2587 . - 0 ID=cds-TGC75981.1;Parent=gene-C9F09_27115;Dbxref=NCBI_GP:TGC75981.1;Name=TGC75981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455831.3;locus_tag=C9F09_27115;product=YgdI/YgdR family lipoprotein;protein_id=TGC75981.1;transl_table=11 PYKB01001552.1 Genbank gene 2716 3306 . - . ID=gene-C9F09_27120;Name=C9F09_27120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27120 PYKB01001552.1 Protein Homology CDS 2716 3306 . - 0 ID=cds-TGC75982.1;Parent=gene-C9F09_27120;Dbxref=NCBI_GP:TGC75982.1;Name=TGC75982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455830.1;locus_tag=C9F09_27120;product=TetR/AcrR family transcriptional regulator;protein_id=TGC75982.1;transl_table=11 PYKB01001552.1 Genbank gene 3384 4097 . + . ID=gene-C9F09_27125;Name=C9F09_27125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27125 PYKB01001552.1 Protein Homology CDS 3384 4097 . + 0 ID=cds-TGC75983.1;Parent=gene-C9F09_27125;Dbxref=NCBI_GP:TGC75983.1;Name=TGC75983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455829.1;locus_tag=C9F09_27125;product=oxidoreductase;protein_id=TGC75983.1;transl_table=11 PYKB01001552.1 Genbank gene 4188 5057 . - . ID=gene-C9F09_27130;Name=C9F09_27130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27130 PYKB01001552.1 Protein Homology CDS 4188 5057 . - 0 ID=cds-TGC75984.1;Parent=gene-C9F09_27130;Dbxref=NCBI_GP:TGC75984.1;Name=TGC75984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455828.1;locus_tag=C9F09_27130;product=aldo/keto reductase;protein_id=TGC75984.1;transl_table=11 ##sequence-region PYKB01001744.1 1 5174 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001744.1 Genbank region 1 5174 . + . ID=PYKB01001744.1:1..5174;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001744.1 Genbank gene 1 1642 . + . ID=gene-C9F09_30555;Name=C9F09_30555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30555;partial=true;start_range=.,1 PYKB01001744.1 Protein Homology CDS 1 1642 . + 1 ID=cds-TGC70674.1;Parent=gene-C9F09_30555;Dbxref=NCBI_GP:TGC70674.1;Name=TGC70674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=C9F09_30555;partial=true;product=phosphotransferase RcsD;protein_id=TGC70674.1;start_range=.,1;transl_table=11 PYKB01001744.1 Genbank gene 1659 2309 . + . ID=gene-C9F09_30560;Name=C9F09_30560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30560 PYKB01001744.1 Protein Homology CDS 1659 2309 . + 0 ID=cds-TGC70675.1;Parent=gene-C9F09_30560;Dbxref=NCBI_GP:TGC70675.1;Name=TGC70675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=C9F09_30560;product=transcriptional regulator RcsB;protein_id=TGC70675.1;transl_table=11 PYKB01001744.1 Genbank gene 2412 5117 . - . ID=gene-C9F09_30565;Name=C9F09_30565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30565 PYKB01001744.1 Protein Homology CDS 2412 5117 . - 0 ID=cds-TGC70676.1;Parent=gene-C9F09_30565;Dbxref=NCBI_GP:TGC70676.1;Name=TGC70676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015690743.1;locus_tag=C9F09_30565;product=two-component system sensor histidine kinase RcsC;protein_id=TGC70676.1;transl_table=11 ##sequence-region PYKB01000112.1 1 5158 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000112.1 Genbank region 1 5158 . + . ID=PYKB01000112.1:1..5158;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000112.1 Genbank pseudogene 5 958 . + . ID=gene-C9F09_01235;Name=C9F09_01235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01235;pseudo=true PYKB01000112.1 Protein Homology CDS 5 958 . + 0 ID=cds-C9F09_01235;Parent=gene-C9F09_01235;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=C9F09_01235;product=2-octaprenyl-6-methoxyphenyl hydroxylase;pseudo=true;transl_table=11 PYKB01000112.1 Genbank gene 1084 2286 . + . ID=gene-C9F09_01240;Name=C9F09_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01240 PYKB01000112.1 Protein Homology CDS 1084 2286 . + 0 ID=cds-TGD05187.1;Parent=gene-C9F09_01240;Dbxref=NCBI_GP:TGD05187.1;Name=TGD05187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=C9F09_01240;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=TGD05187.1;transl_table=11 PYKB01000112.1 Genbank gene 2741 3835 . + . ID=gene-C9F09_01245;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=C9F09_01245 PYKB01000112.1 Protein Homology CDS 2741 3835 . + 0 ID=cds-TGD05188.1;Parent=gene-C9F09_01245;Dbxref=NCBI_GP:TGD05188.1;Name=TGD05188.1;gbkey=CDS;gene=gcvT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457453.1;locus_tag=C9F09_01245;product=aminomethyltransferase;protein_id=TGD05188.1;transl_table=11 PYKB01000112.1 Genbank gene 3861 4250 . + . ID=gene-C9F09_01250;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=C9F09_01250 PYKB01000112.1 Protein Homology CDS 3861 4250 . + 0 ID=cds-TGD05189.1;Parent=gene-C9F09_01250;Dbxref=NCBI_GP:TGD05189.1;Name=TGD05189.1;gbkey=CDS;gene=gcvH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=C9F09_01250;product=glycine cleavage system protein H;protein_id=TGD05189.1;transl_table=11 PYKB01000112.1 Genbank gene 4413 5158 . + . ID=gene-C9F09_01255;Name=C9F09_01255;end_range=5158,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01255;partial=true PYKB01000112.1 Protein Homology CDS 4413 5158 . + 0 ID=cds-TGD05190.1;Parent=gene-C9F09_01255;Dbxref=NCBI_GP:TGD05190.1;Name=TGD05190.1;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine;end_range=5158,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=C9F09_01255;partial=true;product=glycine dehydrogenase (aminomethyl-transferring);protein_id=TGD05190.1;transl_table=11 ##sequence-region PYKB01000684.1 1 5151 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000684.1 Genbank region 1 5151 . + . ID=PYKB01000684.1:1..5151;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000684.1 Genbank gene 1 402 . - . ID=gene-C9F09_10355;Name=C9F09_10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10355;partial=true;start_range=.,1 PYKB01000684.1 Protein Homology CDS 1 402 . - 0 ID=cds-TGC93906.1;Parent=gene-C9F09_10355;Dbxref=NCBI_GP:TGC93906.1;Name=TGC93906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=C9F09_10355;partial=true;product=flagellar basal body rod protein FlgB;protein_id=TGC93906.1;start_range=.,1;transl_table=11 PYKB01000684.1 Genbank pseudogene 422 629 . - . ID=gene-C9F09_10360;Name=C9F09_10360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10360;pseudo=true PYKB01000684.1 Protein Homology CDS 422 629 . - 0 ID=cds-C9F09_10360;Parent=gene-C9F09_10360;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005116827.1;locus_tag=C9F09_10360;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000684.1 Genbank gene 559 1218 . + . ID=gene-C9F09_10365;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=C9F09_10365 PYKB01000684.1 Protein Homology CDS 559 1218 . + 0 ID=cds-TGC93900.1;Parent=gene-C9F09_10365;Dbxref=NCBI_GP:TGC93900.1;Name=TGC93900.1;Note=required for the assembly of the flagellar basal body P-ring;gbkey=CDS;gene=flgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455666.1;locus_tag=C9F09_10365;product=flagella basal body P-ring formation protein FlgA;protein_id=TGC93900.1;transl_table=11 PYKB01000684.1 Genbank gene 1310 1603 . + . ID=gene-C9F09_10370;Name=C9F09_10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10370 PYKB01000684.1 Protein Homology CDS 1310 1603 . + 0 ID=cds-TGC93901.1;Parent=gene-C9F09_10370;Dbxref=NCBI_GP:TGC93901.1;Name=TGC93901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=C9F09_10370;product=anti-sigma-28 factor FlgM;protein_id=TGC93901.1;transl_table=11 PYKB01000684.1 Genbank gene 1608 2030 . + . ID=gene-C9F09_10375;Name=C9F09_10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10375 PYKB01000684.1 Protein Homology CDS 1608 2030 . + 0 ID=cds-TGC93902.1;Parent=gene-C9F09_10375;Dbxref=NCBI_GP:TGC93902.1;Name=TGC93902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455664.1;locus_tag=C9F09_10375;product=flagella synthesis protein FlgN;protein_id=TGC93902.1;transl_table=11 PYKB01000684.1 Genbank gene 2112 3647 . - . ID=gene-C9F09_10380;Name=mviN;gbkey=Gene;gene=mviN;gene_biotype=protein_coding;locus_tag=C9F09_10380 PYKB01000684.1 Protein Homology CDS 2112 3647 . - 0 ID=cds-TGC93903.1;Parent=gene-C9F09_10380;Dbxref=NCBI_GP:TGC93903.1;Name=TGC93903.1;gbkey=CDS;gene=mviN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129059.1;locus_tag=C9F09_10380;product=murein biosynthesis integral membrane protein MurJ;protein_id=TGC93903.1;transl_table=11 PYKB01000684.1 Genbank gene 3951 4874 . - . ID=gene-C9F09_10385;Name=C9F09_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10385 PYKB01000684.1 Protein Homology CDS 3951 4874 . - 0 ID=cds-TGC93904.1;Parent=gene-C9F09_10385;Dbxref=NCBI_GP:TGC93904.1;Name=TGC93904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455662.1;locus_tag=C9F09_10385;product=virulence factor MviM;protein_id=TGC93904.1;transl_table=11 PYKB01000684.1 Genbank gene 4876 5151 . - . ID=gene-C9F09_10390;Name=C9F09_10390;end_range=5151,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10390;partial=true PYKB01000684.1 Protein Homology CDS 4876 5151 . - 0 ID=cds-TGC93905.1;Parent=gene-C9F09_10390;Dbxref=NCBI_GP:TGC93905.1;Name=TGC93905.1;end_range=5151,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455661.1;locus_tag=C9F09_10390;partial=true;product=DUF480 domain-containing protein;protein_id=TGC93905.1;transl_table=11 ##sequence-region PYKB01000939.1 1 5147 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000939.1 Genbank region 1 5147 . + . ID=PYKB01000939.1:1..5147;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000939.1 Genbank gene 1 520 . + . ID=gene-C9F09_15510;Name=C9F09_15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15510;partial=true;start_range=.,1 PYKB01000939.1 Protein Homology CDS 1 520 . + 1 ID=cds-TGC89570.1;Parent=gene-C9F09_15510;Dbxref=NCBI_GP:TGC89570.1;Name=TGC89570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=C9F09_15510;partial=true;product=efflux RND transporter periplasmic adaptor subunit;protein_id=TGC89570.1;start_range=.,1;transl_table=11 PYKB01000939.1 Genbank gene 532 3645 . + . ID=gene-C9F09_15515;Name=C9F09_15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15515 PYKB01000939.1 Protein Homology CDS 532 3645 . + 0 ID=cds-TGC89571.1;Parent=gene-C9F09_15515;Dbxref=NCBI_GP:TGC89571.1;Name=TGC89571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=C9F09_15515;product=hydrophobe/amphiphile efflux-1 family RND transporter;protein_id=TGC89571.1;transl_table=11 PYKB01000939.1 Genbank gene 3882 4103 . + . ID=gene-C9F09_15520;Name=C9F09_15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15520 PYKB01000939.1 Protein Homology CDS 3882 4103 . + 0 ID=cds-TGC89572.1;Parent=gene-C9F09_15520;Dbxref=NCBI_GP:TGC89572.1;Name=TGC89572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457764.1;locus_tag=C9F09_15520;product=hypothetical protein;protein_id=TGC89572.1;transl_table=11 PYKB01000939.1 Genbank gene 4886 5001 . - . ID=gene-C9F09_15525;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F09_15525 PYKB01000939.1 cmsearch rRNA 4886 5001 . - . ID=rna-C9F09_15525;Parent=gene-C9F09_15525;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00001,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_15525;product=5S ribosomal RNA PYKB01000939.1 cmsearch exon 4886 5001 . - . ID=exon-C9F09_15525-1;Parent=rna-C9F09_15525;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00001,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_15525;product=5S ribosomal RNA PYKB01000939.1 Genbank gene 5083 5147 . - . ID=gene-C9F09_15530;Name=C9F09_15530;end_range=5147,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F09_15530;partial=true PYKB01000939.1 Genbank rRNA 5083 5147 . - . ID=rna-C9F09_15530;Parent=gene-C9F09_15530;end_range=5147,.;gbkey=rRNA;locus_tag=C9F09_15530;partial=true;product=23S ribosomal RNA PYKB01000939.1 Genbank exon 5083 5147 . - . ID=exon-C9F09_15530-1;Parent=rna-C9F09_15530;end_range=5147,.;gbkey=rRNA;locus_tag=C9F09_15530;partial=true;product=23S ribosomal RNA ##sequence-region PYKB01000750.1 1 5146 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000750.1 Genbank region 1 5146 . + . ID=PYKB01000750.1:1..5146;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000750.1 Genbank pseudogene 33 1787 . + . ID=gene-C9F09_11570;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=pseudogene;locus_tag=C9F09_11570;pseudo=true PYKB01000750.1 Protein Homology CDS 33 1787 . + 0 ID=cds-C9F09_11570;Parent=gene-C9F09_11570;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=cas3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442766.1;locus_tag=C9F09_11570;product=CRISPR-associated helicase Cas3';pseudo=true;transl_table=11 PYKB01000750.1 Genbank gene 2171 3124 . + . ID=gene-C9F09_11575;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=C9F09_11575 PYKB01000750.1 Protein Homology CDS 2171 3124 . + 0 ID=cds-TGC92925.1;Parent=gene-C9F09_11575;Dbxref=NCBI_GP:TGC92925.1;Name=TGC92925.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441126.1;locus_tag=C9F09_11575;product=SPI-1 type III secretion system effector SopD;protein_id=TGC92925.1;transl_table=11 PYKB01000750.1 Genbank gene 3206 3448 . + . ID=gene-C9F09_11580;Name=C9F09_11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11580 PYKB01000750.1 Protein Homology CDS 3206 3448 . + 0 ID=cds-TGC92923.1;Parent=gene-C9F09_11580;Dbxref=NCBI_GP:TGC92923.1;Name=TGC92923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012705829.1;locus_tag=C9F09_11580;product=hypothetical protein;protein_id=TGC92923.1;transl_table=11 PYKB01000750.1 Genbank gene 3337 4071 . - . ID=gene-C9F09_11585;Name=C9F09_11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11585 PYKB01000750.1 Protein Homology CDS 3337 4071 . - 0 ID=cds-TGC92924.1;Parent=gene-C9F09_11585;Dbxref=NCBI_GP:TGC92924.1;Name=TGC92924.1;Note=catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457335.1;locus_tag=C9F09_11585;product=phosphoadenosine phosphosulfate reductase;protein_id=TGC92924.1;transl_table=11 PYKB01000750.1 Genbank gene 4173 5146 . - . ID=gene-C9F09_11590;Name=C9F09_11590;end_range=5146,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11590;partial=true PYKB01000750.1 Protein Homology CDS 4173 5146 . - 2 ID=cds-TGC92926.1;Parent=gene-C9F09_11590;Dbxref=NCBI_GP:TGC92926.1;Name=TGC92926.1;end_range=5146,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=C9F09_11590;partial=true;product=NADPH-dependent assimilatory sulfite reductase hemoprotein subunit;protein_id=TGC92926.1;transl_table=11 ##sequence-region PYKB01000580.1 1 5139 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000580.1 Genbank region 1 5139 . + . ID=PYKB01000580.1:1..5139;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000580.1 Genbank pseudogene 21 1127 . - . ID=gene-C9F09_08275;Name=C9F09_08275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08275;pseudo=true PYKB01000580.1 Protein Homology CDS 21 1127 . - 0 ID=cds-C9F09_08275;Parent=gene-C9F09_08275;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=C9F09_08275;product=MFS transporter;pseudo=true;transl_table=11 PYKB01000580.1 Genbank gene 1303 2094 . + . ID=gene-C9F09_08280;Name=C9F09_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08280 PYKB01000580.1 Protein Homology CDS 1303 2094 . + 0 ID=cds-TGC95810.1;Parent=gene-C9F09_08280;Dbxref=NCBI_GP:TGC95810.1;Name=TGC95810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132042.1;locus_tag=C9F09_08280;product=DNA-binding transcriptional regulator KdgR;protein_id=TGC95810.1;transl_table=11 PYKB01000580.1 Genbank gene 2306 2545 . - . ID=gene-C9F09_08285;Name=C9F09_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08285 PYKB01000580.1 Protein Homology CDS 2306 2545 . - 0 ID=cds-TGC95811.1;Parent=gene-C9F09_08285;Dbxref=NCBI_GP:TGC95811.1;Name=TGC95811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=C9F09_08285;product=hypothetical protein;protein_id=TGC95811.1;transl_table=11 PYKB01000580.1 Genbank gene 2703 2846 . + . ID=gene-C9F09_08290;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=C9F09_08290 PYKB01000580.1 Protein Homology CDS 2703 2846 . + 0 ID=cds-TGC95812.1;Parent=gene-C9F09_08290;Dbxref=NCBI_GP:TGC95812.1;Name=TGC95812.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456346.1;locus_tag=C9F09_08290;product=PhoP/PhoQ regulator MgrB;protein_id=TGC95812.1;transl_table=11 PYKB01000580.1 Genbank gene 2917 3204 . + . ID=gene-C9F09_08295;Name=C9F09_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08295 PYKB01000580.1 Protein Homology CDS 2917 3204 . + 0 ID=cds-TGC95813.1;Parent=gene-C9F09_08295;Dbxref=NCBI_GP:TGC95813.1;Name=TGC95813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456345.1;locus_tag=C9F09_08295;product=hypothetical protein;protein_id=TGC95813.1;transl_table=11 PYKB01000580.1 Genbank gene 3853 4023 . + . ID=gene-C9F09_08300;Name=C9F09_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08300 PYKB01000580.1 Protein Homology CDS 3853 4023 . + 0 ID=cds-TGC95814.1;Parent=gene-C9F09_08300;Dbxref=NCBI_GP:TGC95814.1;Name=TGC95814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=C9F09_08300;product=DUF2627 domain-containing protein;protein_id=TGC95814.1;transl_table=11 PYKB01000580.1 Genbank gene 4010 4219 . + . ID=gene-C9F09_08305;Name=C9F09_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08305 PYKB01000580.1 Protein Homology CDS 4010 4219 . + 0 ID=cds-TGC95815.1;Parent=gene-C9F09_08305;Dbxref=NCBI_GP:TGC95815.1;Name=TGC95815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=C9F09_08305;product=cold-shock protein CspC;protein_id=TGC95815.1;transl_table=11 PYKB01000580.1 Genbank gene 4439 5139 . + . ID=gene-C9F09_08310;Name=C9F09_08310;end_range=5139,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08310;partial=true PYKB01000580.1 Protein Homology CDS 4439 5139 . + 0 ID=cds-TGC95816.1;Parent=gene-C9F09_08310;Dbxref=NCBI_GP:TGC95816.1;Name=TGC95816.1;end_range=5139,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456342.1;locus_tag=C9F09_08310;partial=true;product=peptidoglycan synthase;protein_id=TGC95816.1;transl_table=11 ##sequence-region PYKB01000539.1 1 5121 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000539.1 Genbank region 1 5121 . + . ID=PYKB01000539.1:1..5121;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000539.1 Genbank pseudogene 1 2453 . + . ID=gene-C9F09_07350;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=pseudogene;gene_synonym=ponB;locus_tag=C9F09_07350;pseudo=true PYKB01000539.1 Protein Homology CDS 1 2453 . + 2 ID=cds-C9F09_07350;Parent=gene-C9F09_07350;Note=penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=mrcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=C9F09_07350;product=bifunctional glycosyl transferase/transpeptidase;pseudo=true;transl_table=11 PYKB01000539.1 Genbank gene 2746 4989 . + . ID=gene-C9F09_07355;Name=C9F09_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07355 PYKB01000539.1 Protein Homology CDS 2746 4989 . + 0 ID=cds-TGC96751.1;Parent=gene-C9F09_07355;Dbxref=NCBI_GP:TGC96751.1;Name=TGC96751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308181.1;locus_tag=C9F09_07355;product=ferrichrome porin FhuA;protein_id=TGC96751.1;transl_table=11 PYKB01000539.1 Genbank gene 5038 5121 . + . ID=gene-C9F09_07360;Name=C9F09_07360;end_range=5121,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07360;partial=true PYKB01000539.1 Protein Homology CDS 5038 5121 . + 0 ID=cds-TGC96752.1;Parent=gene-C9F09_07360;Dbxref=NCBI_GP:TGC96752.1;Name=TGC96752.1;end_range=5121,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454807.1;locus_tag=C9F09_07360;partial=true;product=iron-hydroxamate transporter ATP-binding subunit;protein_id=TGC96752.1;transl_table=11 ##sequence-region PYKB01000940.1 1 5106 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000940.1 Genbank region 1 5106 . + . ID=PYKB01000940.1:1..5106;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000940.1 Genbank gene 1 1181 . + . ID=gene-C9F09_15535;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=C9F09_15535;partial=true;start_range=.,1 PYKB01000940.1 Protein Homology CDS 1 1181 . + 2 ID=cds-TGC89539.1;Parent=gene-C9F09_15535;Dbxref=NCBI_GP:TGC89539.1;Name=TGC89539.1;Note=in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein;gbkey=CDS;gene=ampG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455041.1;locus_tag=C9F09_15535;partial=true;product=muropeptide transporter AmpG;protein_id=TGC89539.1;start_range=.,1;transl_table=11 PYKB01000940.1 Genbank gene 1634 2590 . + . ID=gene-C9F09_15540;Name=C9F09_15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15540 PYKB01000940.1 Protein Homology CDS 1634 2590 . + 0 ID=cds-TGC89540.1;Parent=gene-C9F09_15540;Dbxref=NCBI_GP:TGC89540.1;Name=TGC89540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455040.1;locus_tag=C9F09_15540;product=cytochrome o ubiquinol oxidase subunit II;protein_id=TGC89540.1;transl_table=11 PYKB01000940.1 Genbank gene 2601 4592 . + . ID=gene-C9F09_15545;Name=C9F09_15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15545 PYKB01000940.1 Protein Homology CDS 2601 4592 . + 0 ID=cds-TGC89541.1;Parent=gene-C9F09_15545;Dbxref=NCBI_GP:TGC89541.1;Name=TGC89541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455039.1;locus_tag=C9F09_15545;product=cytochrome o ubiquinol oxidase subunit I;protein_id=TGC89541.1;transl_table=11 PYKB01000940.1 Genbank gene 4582 5106 . + . ID=gene-C9F09_15550;Name=C9F09_15550;end_range=5106,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15550;partial=true PYKB01000940.1 Protein Homology CDS 4582 5106 . + 0 ID=cds-TGC89542.1;Parent=gene-C9F09_15550;Dbxref=NCBI_GP:TGC89542.1;Name=TGC89542.1;end_range=5106,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=C9F09_15550;partial=true;product=cytochrome o ubiquinol oxidase subunit III;protein_id=TGC89542.1;transl_table=11 ##sequence-region PYKB01000046.1 1 5088 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000046.1 Genbank region 1 5088 . + . ID=PYKB01000046.1:1..5088;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000046.1 Genbank gene 1 378 . + . ID=gene-C9F09_00515;Name=C9F09_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00515;partial=true;start_range=.,1 PYKB01000046.1 Protein Homology CDS 1 378 . + 0 ID=cds-TGD06562.1;Parent=gene-C9F09_00515;Dbxref=NCBI_GP:TGD06562.1;Name=TGD06562.1;Note=catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455332.1;locus_tag=C9F09_00515;partial=true;product=urocanate hydratase;protein_id=TGD06562.1;start_range=.,1;transl_table=11 PYKB01000046.1 Genbank gene 380 1900 . + . ID=gene-C9F09_00520;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=C9F09_00520 PYKB01000046.1 Protein Homology CDS 380 1900 . + 0 ID=cds-TGD06563.1;Parent=gene-C9F09_00520;Dbxref=NCBI_GP:TGD06563.1;Name=TGD06563.1;gbkey=CDS;gene=hutH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=C9F09_00520;product=histidine ammonia-lyase;protein_id=TGD06563.1;transl_table=11 PYKB01000046.1 Genbank gene 1985 2461 . - . ID=gene-C9F09_00525;Name=C9F09_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00525 PYKB01000046.1 Protein Homology CDS 1985 2461 . - 0 ID=cds-TGD06564.1;Parent=gene-C9F09_00525;Dbxref=NCBI_GP:TGD06564.1;Name=TGD06564.1;Note=YbhB%3B similar to rat and human kinase inhibitory proteins;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455334.1;locus_tag=C9F09_00525;product=kinase inhibitor;protein_id=TGD06564.1;transl_table=11 PYKB01000046.1 Genbank gene 2519 3808 . - . ID=gene-C9F09_00530;Name=C9F09_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00530 PYKB01000046.1 Protein Homology CDS 2519 3808 . - 0 ID=cds-TGD06565.1;Parent=gene-C9F09_00530;Dbxref=NCBI_GP:TGD06565.1;Name=TGD06565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455335.1;locus_tag=C9F09_00530;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=TGD06565.1;transl_table=11 PYKB01000046.1 Genbank pseudogene 3895 4935 . + . ID=gene-C9F09_00535;Name=C9F09_00535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00535;pseudo=true PYKB01000046.1 Protein Homology CDS 3895 4935 . + 0 ID=cds-C9F09_00535;Parent=gene-C9F09_00535;Note=catalyzes the formation of biotin from dethiobiotin%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455336.1;locus_tag=C9F09_00535;product=biotin synthase;pseudo=true;transl_table=11 PYKB01000046.1 Genbank pseudogene 4932 5072 . + . ID=gene-C9F09_00540;Name=C9F09_00540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00540;pseudo=true PYKB01000046.1 Protein Homology CDS 4932 5072 . + 0 ID=cds-C9F09_00540;Parent=gene-C9F09_00540;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455337.1;locus_tag=C9F09_00540;product=8-amino-7-oxononanoate synthase;pseudo=true;transl_table=11 ##sequence-region PYKB01001737.1 1 13006 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001737.1 Genbank region 1 13006 . + . ID=PYKB01001737.1:1..13006;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001737.1 Genbank gene 1 1284 . + . ID=gene-C9F09_30430;Name=C9F09_30430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30430;partial=true;start_range=.,1 PYKB01001737.1 Protein Homology CDS 1 1284 . + 0 ID=cds-TGC70800.1;Parent=gene-C9F09_30430;Dbxref=NCBI_GP:TGC70800.1;Name=TGC70800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461029.1;locus_tag=C9F09_30430;partial=true;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=TGC70800.1;start_range=.,1;transl_table=11 PYKB01001737.1 Genbank gene 1271 2704 . + . ID=gene-C9F09_30435;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;locus_tag=C9F09_30435 PYKB01001737.1 Protein Homology CDS 1271 2704 . + 0 ID=cds-TGC70801.1;Parent=gene-C9F09_30435;Dbxref=NCBI_GP:TGC70801.1;Name=TGC70801.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461028.1;locus_tag=C9F09_30435;product=phosphomannomutase CpsG;protein_id=TGC70801.1;transl_table=11 PYKB01001737.1 Genbank gene 2776 4206 . + . ID=gene-C9F09_30440;Name=C9F09_30440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30440 PYKB01001737.1 Protein Homology CDS 2776 4206 . + 0 ID=cds-TGC70802.1;Parent=gene-C9F09_30440;Dbxref=NCBI_GP:TGC70802.1;Name=TGC70802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=C9F09_30440;product=undecaprenyl-phosphate galactose phosphotransferase;protein_id=TGC70802.1;transl_table=11 PYKB01001737.1 Genbank gene 4370 5776 . + . ID=gene-C9F09_30445;Name=C9F09_30445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30445 PYKB01001737.1 Protein Homology CDS 4370 5776 . + 0 ID=cds-TGC70803.1;Parent=gene-C9F09_30445;Dbxref=NCBI_GP:TGC70803.1;Name=TGC70803.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043504.1;locus_tag=C9F09_30445;product=phosphogluconate dehydrogenase (NADP(+)-dependent%2C decarboxylating);protein_id=TGC70803.1;transl_table=11 PYKB01001737.1 Genbank pseudogene 5764 5951 . + . ID=gene-C9F09_30450;Name=C9F09_30450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_30450;pseudo=true PYKB01001737.1 Protein Homology CDS 5764 5951 . + 0 ID=cds-C9F09_30450;Parent=gene-C9F09_30450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000232814.1;locus_tag=C9F09_30450;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001737.1 Genbank gene 6013 7179 . + . ID=gene-C9F09_30455;Name=C9F09_30455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30455 PYKB01001737.1 Protein Homology CDS 6013 7179 . + 0 ID=cds-TGC70804.1;Parent=gene-C9F09_30455;Dbxref=NCBI_GP:TGC70804.1;Name=TGC70804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=C9F09_30455;product=UDP-glucose 6-dehydrogenase;protein_id=TGC70804.1;transl_table=11 PYKB01001737.1 Genbank gene 7322 8305 . + . ID=gene-C9F09_30460;Name=C9F09_30460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30460 PYKB01001737.1 Protein Homology CDS 7322 8305 . + 0 ID=cds-TGC70805.1;Parent=gene-C9F09_30460;Dbxref=NCBI_GP:TGC70805.1;Name=TGC70805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=C9F09_30460;product=LPS O-antigen chain length determinant protein WzzB;protein_id=TGC70805.1;transl_table=11 PYKB01001737.1 Genbank gene 8386 8997 . - . ID=gene-C9F09_30465;Name=C9F09_30465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30465 PYKB01001737.1 Protein Homology CDS 8386 8997 . - 0 ID=cds-TGC70806.1;Parent=gene-C9F09_30465;Dbxref=NCBI_GP:TGC70806.1;Name=TGC70806.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456626.1;locus_tag=C9F09_30465;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase;protein_id=TGC70806.1;transl_table=11 PYKB01001737.1 Genbank gene 8991 9767 . - . ID=gene-C9F09_30470;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=C9F09_30470 PYKB01001737.1 Protein Homology CDS 8991 9767 . - 0 ID=cds-TGC70807.1;Parent=gene-C9F09_30470;Dbxref=NCBI_GP:TGC70807.1;Name=TGC70807.1;gbkey=CDS;gene=hisF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456625.1;locus_tag=C9F09_30470;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=TGC70807.1;transl_table=11 PYKB01001737.1 Genbank gene 9713 10486 . - . ID=gene-C9F09_30475;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=C9F09_30475 PYKB01001737.1 Protein Homology CDS 9713 10486 . - 0 ID=cds-TGC70808.1;Parent=gene-C9F09_30475;Dbxref=NCBI_GP:TGC70808.1;Name=TGC70808.1;gbkey=CDS;gene=hisA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456624.1;locus_tag=C9F09_30475;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=TGC70808.1;transl_table=11 PYKB01001737.1 Genbank gene 10486 11076 . - . ID=gene-C9F09_30480;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=C9F09_30480 PYKB01001737.1 Protein Homology CDS 10486 11076 . - 0 ID=cds-TGC70809.1;Parent=gene-C9F09_30480;Dbxref=NCBI_GP:TGC70809.1;Name=TGC70809.1;gbkey=CDS;gene=hisH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=C9F09_30480;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=TGC70809.1;transl_table=11 PYKB01001737.1 Genbank gene 11076 12143 . - . ID=gene-C9F09_30485;Name=C9F09_30485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30485 PYKB01001737.1 Protein Homology CDS 11076 12143 . - 0 ID=cds-TGC70810.1;Parent=gene-C9F09_30485;Dbxref=NCBI_GP:TGC70810.1;Name=TGC70810.1;Note=catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128082.1;locus_tag=C9F09_30485;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase;protein_id=TGC70810.1;transl_table=11 PYKB01001737.1 Genbank gene 12140 13006 . - . ID=gene-C9F09_30490;Name=C9F09_30490;end_range=13006,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30490;partial=true PYKB01001737.1 Protein Homology CDS 12140 13006 . - 0 ID=cds-TGC70811.1;Parent=gene-C9F09_30490;Dbxref=NCBI_GP:TGC70811.1;Name=TGC70811.1;end_range=13006,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=C9F09_30490;partial=true;product=histidinol-phosphate transaminase;protein_id=TGC70811.1;transl_table=11 ##sequence-region PYKB01000880.1 1 5084 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000880.1 Genbank region 1 5084 . + . ID=PYKB01000880.1:1..5084;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000880.1 Genbank gene 1 898 . - . ID=gene-C9F09_14335;Name=C9F09_14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14335;partial=true;start_range=.,1 PYKB01000880.1 Protein Homology CDS 1 898 . - 0 ID=cds-TGC90604.1;Parent=gene-C9F09_14335;Dbxref=NCBI_GP:TGC90604.1;Name=TGC90604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456842.1;locus_tag=C9F09_14335;partial=true;product=formyltransferase;protein_id=TGC90604.1;start_range=.,1;transl_table=11 PYKB01000880.1 Genbank gene 895 1878 . - . ID=gene-C9F09_14340;Name=C9F09_14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14340 PYKB01000880.1 Protein Homology CDS 895 1878 . - 0 ID=cds-TGC90605.1;Parent=gene-C9F09_14340;Dbxref=NCBI_GP:TGC90605.1;Name=TGC90605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=C9F09_14340;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=TGC90605.1;transl_table=11 PYKB01000880.1 Genbank gene 1881 3038 . - . ID=gene-C9F09_14345;Name=C9F09_14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14345 PYKB01000880.1 Protein Homology CDS 1881 3038 . - 0 ID=cds-TGC90606.1;Parent=gene-C9F09_14345;Dbxref=NCBI_GP:TGC90606.1;Name=TGC90606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461239.3;locus_tag=C9F09_14345;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=TGC90606.1;transl_table=11 PYKB01000880.1 Genbank gene 3319 3924 . + . ID=gene-C9F09_14350;Name=C9F09_14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14350 PYKB01000880.1 Protein Homology CDS 3319 3924 . + 0 ID=cds-TGC90607.1;Parent=gene-C9F09_14350;Dbxref=NCBI_GP:TGC90607.1;Name=TGC90607.1;Note=catalyzes the of heptose(II) of the outer membrane lipopolysaccharide core;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=C9F09_14350;product=histidine phosphatase family protein;protein_id=TGC90607.1;transl_table=11 PYKB01000880.1 Genbank gene 3969 4394 . - . ID=gene-C9F09_14355;Name=C9F09_14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14355 PYKB01000880.1 Protein Homology CDS 3969 4394 . - 0 ID=cds-TGC90608.1;Parent=gene-C9F09_14355;Dbxref=NCBI_GP:TGC90608.1;Name=TGC90608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=C9F09_14355;product=nucleoside triphosphatase NudI;protein_id=TGC90608.1;transl_table=11 PYKB01000880.1 Genbank gene 4568 5084 . + . ID=gene-C9F09_14360;Name=C9F09_14360;end_range=5084,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14360;partial=true PYKB01000880.1 Protein Homology CDS 4568 5084 . + 0 ID=cds-TGC90609.1;Parent=gene-C9F09_14360;Dbxref=NCBI_GP:TGC90609.1;Name=TGC90609.1;end_range=5084,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461236.1;locus_tag=C9F09_14360;partial=true;product=porin;protein_id=TGC90609.1;transl_table=11 ##sequence-region PYKB01001300.1 1 5069 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001300.1 Genbank region 1 5069 . + . ID=PYKB01001300.1:1..5069;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001300.1 Genbank gene 1 1045 . - . ID=gene-C9F09_22250;Name=C9F09_22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22250;partial=true;start_range=.,1 PYKB01001300.1 Protein Homology CDS 1 1045 . - 0 ID=cds-TGC81564.1;Parent=gene-C9F09_22250;Dbxref=NCBI_GP:TGC81564.1;Name=TGC81564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=C9F09_22250;partial=true;product=NupC/NupG family nucleoside CNT transporter;protein_id=TGC81564.1;start_range=.,1;transl_table=11 PYKB01001300.1 Genbank gene 1388 2629 . + . ID=gene-C9F09_22255;Name=C9F09_22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22255 PYKB01001300.1 Protein Homology CDS 1388 2629 . + 0 ID=cds-TGC81565.1;Parent=gene-C9F09_22255;Dbxref=NCBI_GP:TGC81565.1;Name=TGC81565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456951.1;locus_tag=C9F09_22255;product=divalent metal cation transporter;protein_id=TGC81565.1;transl_table=11 PYKB01001300.1 Genbank gene 2690 3016 . - . ID=gene-C9F09_22260;Name=C9F09_22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22260 PYKB01001300.1 Protein Homology CDS 2690 3016 . - 0 ID=cds-TGC81566.1;Parent=gene-C9F09_22260;Dbxref=NCBI_GP:TGC81566.1;Name=TGC81566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456950.1;locus_tag=C9F09_22260;product=DUF2502 domain-containing protein;protein_id=TGC81566.1;transl_table=11 PYKB01001300.1 Genbank gene 3130 4128 . - . ID=gene-C9F09_22265;Name=C9F09_22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22265 PYKB01001300.1 Protein Homology CDS 3130 4128 . - 0 ID=cds-TGC81567.1;Parent=gene-C9F09_22265;Dbxref=NCBI_GP:TGC81567.1;Name=TGC81567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=C9F09_22265;product=L-glyceraldehyde 3-phosphate reductase;protein_id=TGC81567.1;transl_table=11 PYKB01001300.1 Genbank gene 4125 4313 . - . ID=gene-C9F09_22270;Name=C9F09_22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22270 PYKB01001300.1 Protein Homology CDS 4125 4313 . - 0 ID=cds-TGC81568.1;Parent=gene-C9F09_22270;Dbxref=NCBI_GP:TGC81568.1;Name=TGC81568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341300.1;locus_tag=C9F09_22270;product=hypothetical protein;protein_id=TGC81568.1;transl_table=11 PYKB01001300.1 Genbank pseudogene 4308 5009 . + . ID=gene-C9F09_22275;Name=C9F09_22275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22275;pseudo=true PYKB01001300.1 Protein Homology CDS 4308 5009 . + 0 ID=cds-C9F09_22275;Parent=gene-C9F09_22275;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=C9F09_22275;product=indolepyruvate decarboxylase;pseudo=true;transl_table=11 ##sequence-region PYKB01001248.1 1 5064 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001248.1 Genbank region 1 5064 . + . ID=PYKB01001248.1:1..5064;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001248.1 Genbank gene 35 247 . - . ID=gene-C9F09_21260;Name=C9F09_21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21260 PYKB01001248.1 Protein Homology CDS 35 247 . - 0 ID=cds-TGC82518.1;Parent=gene-C9F09_21260;Dbxref=NCBI_GP:TGC82518.1;Name=TGC82518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000854955.1;locus_tag=C9F09_21260;product=GntR family transcriptional regulator;protein_id=TGC82518.1;transl_table=11 PYKB01001248.1 Genbank gene 600 1052 . - . ID=gene-C9F09_21265;Name=C9F09_21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21265 PYKB01001248.1 Protein Homology CDS 600 1052 . - 0 ID=cds-TGC82519.1;Parent=gene-C9F09_21265;Dbxref=NCBI_GP:TGC82519.1;Name=TGC82519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=C9F09_21265;product=DUF1198 domain-containing protein;protein_id=TGC82519.1;transl_table=11 PYKB01001248.1 Genbank gene 1245 2636 . - . ID=gene-C9F09_21270;Name=C9F09_21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21270 PYKB01001248.1 Protein Homology CDS 1245 2636 . - 0 ID=cds-TGC82520.1;Parent=gene-C9F09_21270;Dbxref=NCBI_GP:TGC82520.1;Name=TGC82520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=C9F09_21270;product=hexose phosphate transporter;protein_id=TGC82520.1;transl_table=11 PYKB01001248.1 Genbank gene 2779 4107 . - . ID=gene-C9F09_21275;Name=C9F09_21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21275 PYKB01001248.1 Protein Homology CDS 2779 4107 . - 0 ID=cds-TGC82521.1;Parent=gene-C9F09_21275;Dbxref=NCBI_GP:TGC82521.1;Name=TGC82521.1;Note=membrane protein regulates uhpT expression;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=C9F09_21275;product=MFS transporter family glucose-6-phosphate receptor UhpC;protein_id=TGC82521.1;transl_table=11 PYKB01001248.1 Genbank pseudogene 4117 4989 . - . ID=gene-C9F09_21280;Name=C9F09_21280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21280;pseudo=true PYKB01001248.1 Protein Homology CDS 4117 4989 . - 0 ID=cds-C9F09_21280;Parent=gene-C9F09_21280;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=C9F09_21280;product=signal transduction histidine-protein kinase/phosphatase UhpB;pseudo=true;transl_table=11 ##sequence-region PYKB01001142.1 1 5039 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001142.1 Genbank region 1 5039 . + . ID=PYKB01001142.1:1..5039;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001142.1 Genbank pseudogene 76 387 . + . ID=gene-C9F09_19315;Name=C9F09_19315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_19315;pseudo=true PYKB01001142.1 Protein Homology CDS 76 387 . + 0 ID=cds-C9F09_19315;Parent=gene-C9F09_19315;Note=periplasmic substrate-binding component of the ATP-dependent ribose transport system%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458059.1;locus_tag=C9F09_19315;product=D-ribose ABC transporter substrate-binding protein;pseudo=true;transl_table=11 PYKB01001142.1 Genbank gene 520 1449 . + . ID=gene-C9F09_19320;Name=C9F09_19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19320 PYKB01001142.1 Protein Homology CDS 520 1449 . + 0 ID=cds-TGC84869.1;Parent=gene-C9F09_19320;Dbxref=NCBI_GP:TGC84869.1;Name=TGC84869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458058.1;locus_tag=C9F09_19320;product=ribokinase;protein_id=TGC84869.1;transl_table=11 PYKB01001142.1 Genbank gene 1453 2451 . + . ID=gene-C9F09_19325;Name=C9F09_19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19325 PYKB01001142.1 Protein Homology CDS 1453 2451 . + 0 ID=cds-TGC84870.1;Parent=gene-C9F09_19325;Dbxref=NCBI_GP:TGC84870.1;Name=TGC84870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458057.1;locus_tag=C9F09_19325;product=transcriptional regulator RbsR;protein_id=TGC84870.1;transl_table=11 PYKB01001142.1 Genbank gene 2417 3844 . - . ID=gene-C9F09_19330;Name=C9F09_19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19330 PYKB01001142.1 Protein Homology CDS 2417 3844 . - 0 ID=cds-TGC84871.1;Parent=gene-C9F09_19330;Dbxref=NCBI_GP:TGC84871.1;Name=TGC84871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=C9F09_19330;product=MFS transporter;protein_id=TGC84871.1;transl_table=11 PYKB01001142.1 Genbank gene 3856 4560 . - . ID=gene-C9F09_19335;Name=C9F09_19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19335 PYKB01001142.1 Protein Homology CDS 3856 4560 . - 0 ID=cds-TGC84872.1;Parent=gene-C9F09_19335;Dbxref=NCBI_GP:TGC84872.1;Name=TGC84872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=C9F09_19335;product=GntR family transcriptional regulator;protein_id=TGC84872.1;transl_table=11 ##sequence-region PYKB01000608.1 1 5030 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000608.1 Genbank region 1 5030 . + . ID=PYKB01000608.1:1..5030;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000608.1 Genbank pseudogene 1 669 . + . ID=gene-C9F09_08990;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=pseudogene;locus_tag=C9F09_08990;pseudo=true PYKB01000608.1 Protein Homology CDS 1 669 . + 0 ID=cds-C9F09_08990;Parent=gene-C9F09_08990;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=hemN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458045.1;locus_tag=C9F09_08990;product=oxygen-independent coproporphyrinogen III oxidase;pseudo=true;transl_table=11 PYKB01000608.1 Genbank gene 759 869 . - . ID=gene-C9F09_08995;Name=C9F09_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08995 PYKB01000608.1 Protein Homology CDS 759 869 . - 0 ID=cds-TGC95163.1;Parent=gene-C9F09_08995;Dbxref=NCBI_GP:TGC95163.1;Name=TGC95163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=C9F09_08995;product=hypothetical protein;protein_id=TGC95163.1;transl_table=11 PYKB01000608.1 Genbank gene 982 2391 . - . ID=gene-C9F09_09000;Name=C9F09_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09000 PYKB01000608.1 Protein Homology CDS 982 2391 . - 0 ID=cds-TGC95164.1;Parent=gene-C9F09_09000;Dbxref=NCBI_GP:TGC95164.1;Name=TGC95164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=C9F09_09000;product=nitrogen regulation protein NR(I);protein_id=TGC95164.1;transl_table=11 PYKB01000608.1 Genbank gene 2400 3449 . - . ID=gene-C9F09_09005;Name=C9F09_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09005 PYKB01000608.1 Protein Homology CDS 2400 3449 . - 0 ID=cds-TGC95165.1;Parent=gene-C9F09_09005;Dbxref=NCBI_GP:TGC95165.1;Name=TGC95165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458043.1;locus_tag=C9F09_09005;product=two-component system sensor histidine kinase NtrB;protein_id=TGC95165.1;transl_table=11 PYKB01000608.1 Genbank gene 3401 3580 . - . ID=gene-C9F09_09010;Name=C9F09_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09010 PYKB01000608.1 Protein Homology CDS 3401 3580 . - 0 ID=cds-TGC95166.1;Parent=gene-C9F09_09010;Dbxref=NCBI_GP:TGC95166.1;Name=TGC95166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534586.1;locus_tag=C9F09_09010;product=hypothetical protein;protein_id=TGC95166.1;transl_table=11 PYKB01000608.1 Genbank pseudogene 3724 4911 . - . ID=gene-C9F09_09015;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=pseudogene;locus_tag=C9F09_09015;pseudo=true PYKB01000608.1 Protein Homology CDS 3724 4911 . - 0 ID=cds-C9F09_09015;Parent=gene-C9F09_09015;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=glnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=C9F09_09015;product=glutamine synthetase;pseudo=true;transl_table=11 ##sequence-region PYKB01001640.1 1 5025 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001640.1 Genbank region 1 5025 . + . ID=PYKB01001640.1:1..5025;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001640.1 Genbank pseudogene 1 1043 . - . ID=gene-C9F09_28670;Name=C9F09_28670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28670;pseudo=true PYKB01001640.1 Protein Homology CDS 1 1043 . - 0 ID=cds-C9F09_28670;Parent=gene-C9F09_28670;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=C9F09_28670;product=MFS transporter;pseudo=true;transl_table=11 PYKB01001640.1 Genbank gene 1093 1977 . + . ID=gene-C9F09_28675;Name=C9F09_28675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28675 PYKB01001640.1 Protein Homology CDS 1093 1977 . + 0 ID=cds-TGC73803.1;Parent=gene-C9F09_28675;Dbxref=NCBI_GP:TGC73803.1;Name=TGC73803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=C9F09_28675;product=GntR family transcriptional regulator;protein_id=TGC73803.1;transl_table=11 PYKB01001640.1 Genbank gene 2060 2788 . + . ID=gene-C9F09_28680;Name=C9F09_28680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28680 PYKB01001640.1 Protein Homology CDS 2060 2788 . + 0 ID=cds-TGC73804.1;Parent=gene-C9F09_28680;Dbxref=NCBI_GP:TGC73804.1;Name=TGC73804.1;Note=Involved in ubiquinone biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=C9F09_28680;product=bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase;protein_id=TGC73804.1;transl_table=11 PYKB01001640.1 Genbank pseudogene 3144 4958 . + . ID=gene-C9F09_28685;Name=C9F09_28685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28685;pseudo=true PYKB01001640.1 Protein Homology CDS 3144 4958 . + 0 ID=cds-C9F09_28685;Parent=gene-C9F09_28685;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=C9F09_28685;product=ribonucleoside-diphosphate reductase subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKB01001616.1 1 5008 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001616.1 Genbank region 1 5008 . + . ID=PYKB01001616.1:1..5008;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001616.1 Genbank gene 1 350 . + . ID=gene-C9F09_28285;Name=C9F09_28285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28285;partial=true;start_range=.,1 PYKB01001616.1 Protein Homology CDS 1 350 . + 2 ID=cds-TGC74599.1;Parent=gene-C9F09_28285;Dbxref=NCBI_GP:TGC74599.1;Name=TGC74599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=C9F09_28285;partial=true;product=cytoplasmic protein;protein_id=TGC74599.1;start_range=.,1;transl_table=11 PYKB01001616.1 Genbank gene 363 1388 . + . ID=gene-C9F09_28290;Name=C9F09_28290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28290 PYKB01001616.1 Protein Homology CDS 363 1388 . + 0 ID=cds-TGC74600.1;Parent=gene-C9F09_28290;Dbxref=NCBI_GP:TGC74600.1;Name=TGC74600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=C9F09_28290;product=hypothetical protein;protein_id=TGC74600.1;transl_table=11 PYKB01001616.1 Genbank gene 1381 2256 . + . ID=gene-C9F09_28295;Name=C9F09_28295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28295 PYKB01001616.1 Protein Homology CDS 1381 2256 . + 0 ID=cds-TGC74601.1;Parent=gene-C9F09_28295;Dbxref=NCBI_GP:TGC74601.1;Name=TGC74601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=C9F09_28295;product=hypothetical protein;protein_id=TGC74601.1;transl_table=11 PYKB01001616.1 Genbank pseudogene 2258 3496 . + . ID=gene-C9F09_28300;Name=C9F09_28300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28300;pseudo=true PYKB01001616.1 Protein Homology CDS 2258 3496 . + 0 ID=cds-C9F09_28300;Parent=gene-C9F09_28300;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=C9F09_28300;product=coproporphyrinogen III oxidase;pseudo=true;transl_table=11 PYKB01001616.1 Genbank gene 3496 4374 . + . ID=gene-C9F09_28305;Name=C9F09_28305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28305 PYKB01001616.1 Protein Homology CDS 3496 4374 . + 0 ID=cds-TGC74602.1;Parent=gene-C9F09_28305;Dbxref=NCBI_GP:TGC74602.1;Name=TGC74602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=C9F09_28305;product=hypothetical protein;protein_id=TGC74602.1;transl_table=11 PYKB01001616.1 Genbank gene 4359 5008 . + . ID=gene-C9F09_28310;Name=C9F09_28310;end_range=5008,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28310;partial=true PYKB01001616.1 Protein Homology CDS 4359 5008 . + 0 ID=cds-TGC74603.1;Parent=gene-C9F09_28310;Dbxref=NCBI_GP:TGC74603.1;Name=TGC74603.1;end_range=5008,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458040.1;locus_tag=C9F09_28310;partial=true;product=hydrolase;protein_id=TGC74603.1;transl_table=11 ##sequence-region PYKB01000222.1 1 5001 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000222.1 Genbank region 1 5001 . + . ID=PYKB01000222.1:1..5001;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000222.1 Genbank pseudogene 91 1032 . + . ID=gene-C9F09_02370;Name=C9F09_02370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02370;pseudo=true PYKB01000222.1 Protein Homology CDS 91 1032 . + 0 ID=cds-C9F09_02370;Parent=gene-C9F09_02370;Note=high-affinity transporter for xanthine%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458181.1;locus_tag=C9F09_02370;product=xanthine permease XanP;pseudo=true;transl_table=11 PYKB01000222.1 Genbank pseudogene 1153 2862 . + . ID=gene-C9F09_02375;Name=C9F09_02375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02375;pseudo=true PYKB01000222.1 Protein Homology CDS 1153 2862 . + 0 ID=cds-C9F09_02375;Parent=gene-C9F09_02375;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=C9F09_02375;product=AsmA family protein;pseudo=true;transl_table=11 PYKB01000222.1 Genbank gene 2965 5001 . - . ID=gene-C9F09_02380;Name=C9F09_02380;end_range=5001,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02380;partial=true PYKB01000222.1 Protein Homology CDS 2965 5001 . - 0 ID=cds-TGD03274.1;Parent=gene-C9F09_02380;Dbxref=NCBI_GP:TGD03274.1;Name=TGD03274.1;end_range=5001,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458179.1;locus_tag=C9F09_02380;partial=true;product=alpha-xylosidase;protein_id=TGD03274.1;transl_table=11 ##sequence-region PYKB01001421.1 1 5000 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001421.1 Genbank region 1 5000 . + . ID=PYKB01001421.1:1..5000;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001421.1 Genbank gene 1 732 . - . ID=gene-C9F09_24430;Name=C9F09_24430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24430;partial=true;start_range=.,1 PYKB01001421.1 Protein Homology CDS 1 732 . - 0 ID=cds-TGC78996.1;Parent=gene-C9F09_24430;Dbxref=NCBI_GP:TGC78996.1;Name=TGC78996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455973.1;locus_tag=C9F09_24430;partial=true;product=MFS transporter;protein_id=TGC78996.1;start_range=.,1;transl_table=11 PYKB01001421.1 Genbank gene 786 1805 . - . ID=gene-C9F09_24435;Name=C9F09_24435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24435 PYKB01001421.1 Protein Homology CDS 786 1805 . - 0 ID=cds-TGC78990.1;Parent=gene-C9F09_24435;Dbxref=NCBI_GP:TGC78990.1;Name=TGC78990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=C9F09_24435;product=Zn-dependent oxidoreductase;protein_id=TGC78990.1;transl_table=11 PYKB01001421.1 Genbank gene 1816 3030 . - . ID=gene-C9F09_24440;Name=C9F09_24440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24440 PYKB01001421.1 Protein Homology CDS 1816 3030 . - 0 ID=cds-TGC78991.1;Parent=gene-C9F09_24440;Dbxref=NCBI_GP:TGC78991.1;Name=TGC78991.1;Note=starvation-sensing protein%3B maybe involved in homoserine lactone degradation;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=C9F09_24440;product=bifunctional D-altronate/D-mannonate dehydratase;protein_id=TGC78991.1;transl_table=11 PYKB01001421.1 Genbank gene 3152 3478 . - . ID=gene-C9F09_24445;Name=C9F09_24445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24445 PYKB01001421.1 Protein Homology CDS 3152 3478 . - 0 ID=cds-TGC78992.1;Parent=gene-C9F09_24445;Dbxref=NCBI_GP:TGC78992.1;Name=TGC78992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=C9F09_24445;product=YnfA family protein;protein_id=TGC78992.1;transl_table=11 PYKB01001421.1 Genbank gene 3630 3971 . + . ID=gene-C9F09_24450;Name=C9F09_24450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24450 PYKB01001421.1 Protein Homology CDS 3630 3971 . + 0 ID=cds-TGC78993.1;Parent=gene-C9F09_24450;Dbxref=NCBI_GP:TGC78993.1;Name=TGC78993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455977.1;locus_tag=C9F09_24450;product=DUF1283 domain-containing protein;protein_id=TGC78993.1;transl_table=11 PYKB01001421.1 Genbank gene 4007 4567 . + . ID=gene-C9F09_24455;Name=C9F09_24455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24455 PYKB01001421.1 Protein Homology CDS 4007 4567 . + 0 ID=cds-TGC78994.1;Parent=gene-C9F09_24455;Dbxref=NCBI_GP:TGC78994.1;Name=TGC78994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=C9F09_24455;product=spermidine N1-acetyltransferase;protein_id=TGC78994.1;transl_table=11 PYKB01001421.1 Genbank gene 4608 5000 . - . ID=gene-C9F09_24460;Name=C9F09_24460;end_range=5000,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24460;partial=true PYKB01001421.1 Protein Homology CDS 4608 5000 . - 0 ID=cds-TGC78995.1;Parent=gene-C9F09_24460;Dbxref=NCBI_GP:TGC78995.1;Name=TGC78995.1;end_range=5000,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455979.1;locus_tag=C9F09_24460;partial=true;product=YnfC family lipoprotein;protein_id=TGC78995.1;transl_table=11 ##sequence-region PYKB01000259.1 1 4998 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000259.1 Genbank region 1 4998 . + . ID=PYKB01000259.1:1..4998;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000259.1 Genbank gene 1 476 . + . ID=gene-C9F09_02855;Name=C9F09_02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02855;partial=true;start_range=.,1 PYKB01000259.1 Protein Homology CDS 1 476 . + 2 ID=cds-TGD02266.1;Parent=gene-C9F09_02855;Dbxref=NCBI_GP:TGD02266.1;Name=TGD02266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455324.1;locus_tag=C9F09_02855;partial=true;product=hypothetical protein;protein_id=TGD02266.1;start_range=.,1;transl_table=11 PYKB01000259.1 Genbank gene 479 1537 . + . ID=gene-C9F09_02860;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=C9F09_02860 PYKB01000259.1 Protein Homology CDS 479 1537 . + 0 ID=cds-TGD02267.1;Parent=gene-C9F09_02860;Dbxref=NCBI_GP:TGD02267.1;Name=TGD02267.1;Note=Part of the ABC transporter complex modABC involved in molybdenum import;gbkey=CDS;gene=modC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=C9F09_02860;product=molybdenum import ATP-binding protein ModC;protein_id=TGD02267.1;transl_table=11 PYKB01000259.1 Genbank gene 1538 2356 . - . ID=gene-C9F09_02865;Name=C9F09_02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02865 PYKB01000259.1 Protein Homology CDS 1538 2356 . - 0 ID=cds-TGD02269.1;Parent=gene-C9F09_02865;Dbxref=NCBI_GP:TGD02269.1;Name=TGD02269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=C9F09_02865;product=Cof-type HAD-IIB family hydrolase;protein_id=TGD02269.1;transl_table=11 PYKB01000259.1 Genbank gene 2520 3515 . + . ID=gene-C9F09_02870;Name=C9F09_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02870 PYKB01000259.1 Protein Homology CDS 2520 3515 . + 0 ID=cds-TGD02268.1;Parent=gene-C9F09_02870;Dbxref=NCBI_GP:TGD02268.1;Name=TGD02268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=C9F09_02870;product=6-phosphogluconolactonase;protein_id=TGD02268.1;transl_table=11 PYKB01000259.1 Genbank pseudogene 3659 4942 . - . ID=gene-C9F09_02875;Name=C9F09_02875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02875;pseudo=true PYKB01000259.1 Protein Homology CDS 3659 4942 . - 0 ID=cds-C9F09_02875;Parent=gene-C9F09_02875;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=C9F09_02875;product=acyl-CoA thioesterase;pseudo=true;transl_table=11 ##sequence-region PYKB01000764.1 1 12919 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000764.1 Genbank region 1 12919 . + . ID=PYKB01000764.1:1..12919;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000764.1 Genbank gene 1 203 . - . ID=gene-C9F09_11815;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=C9F09_11815;partial=true;start_range=.,1 PYKB01000764.1 Protein Homology CDS 1 203 . - 0 ID=cds-TGC92683.1;Parent=gene-C9F09_11815;Dbxref=NCBI_GP:TGC92683.1;Name=TGC92683.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=C9F09_11815;partial=true;product=cell division protein ZapC;protein_id=TGC92683.1;start_range=.,1;transl_table=11 PYKB01000764.1 Genbank gene 153 365 . + . ID=gene-C9F09_11820;Name=C9F09_11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11820 PYKB01000764.1 Protein Homology CDS 153 365 . + 0 ID=cds-TGC92673.1;Parent=gene-C9F09_11820;Dbxref=NCBI_GP:TGC92673.1;Name=TGC92673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218975.1;locus_tag=C9F09_11820;product=hypothetical protein;protein_id=TGC92673.1;transl_table=11 PYKB01000764.1 Genbank gene 369 1379 . - . ID=gene-C9F09_11825;Name=C9F09_11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11825 PYKB01000764.1 Protein Homology CDS 369 1379 . - 0 ID=cds-TGC92674.1;Parent=gene-C9F09_11825;Dbxref=NCBI_GP:TGC92674.1;Name=TGC92674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=C9F09_11825;product=dihydroorotate dehydrogenase (quinone);protein_id=TGC92674.1;transl_table=11 PYKB01000764.1 Genbank gene 1587 4199 . - . ID=gene-C9F09_11830;Name=C9F09_11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11830 PYKB01000764.1 Protein Homology CDS 1587 4199 . - 0 ID=cds-TGC92675.1;Parent=gene-C9F09_11830;Dbxref=NCBI_GP:TGC92675.1;Name=TGC92675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=C9F09_11830;product=aminopeptidase N;protein_id=TGC92675.1;transl_table=11 PYKB01000764.1 Genbank gene 4466 5668 . + . ID=gene-C9F09_11835;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=C9F09_11835 PYKB01000764.1 Protein Homology CDS 4466 5668 . + 0 ID=cds-TGC92676.1;Parent=gene-C9F09_11835;Dbxref=NCBI_GP:TGC92676.1;Name=TGC92676.1;gbkey=CDS;gene=pncB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=C9F09_11835;product=nicotinate phosphoribosyltransferase;protein_id=TGC92676.1;transl_table=11 PYKB01000764.1 Genbank gene 5749 7182 . - . ID=gene-C9F09_11840;Name=C9F09_11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11840 PYKB01000764.1 Protein Homology CDS 5749 7182 . - 0 ID=cds-TGC92677.1;Parent=gene-C9F09_11840;Dbxref=NCBI_GP:TGC92677.1;Name=TGC92677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455488.1;locus_tag=C9F09_11840;product=sodium:alanine symporter family protein;protein_id=TGC92677.1;transl_table=11 PYKB01000764.1 Genbank gene 7428 8642 . - . ID=gene-C9F09_11845;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=C9F09_11845 PYKB01000764.1 Protein Homology CDS 7428 8642 . - 0 ID=cds-TGC92678.1;Parent=gene-C9F09_11845;Dbxref=NCBI_GP:TGC92678.1;Name=TGC92678.1;gbkey=CDS;gene=dpaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=C9F09_11845;product=diaminopropionate ammonia-lyase;protein_id=TGC92678.1;transl_table=11 PYKB01000764.1 Genbank gene 8729 8962 . + . ID=gene-C9F09_11850;Name=C9F09_11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11850 PYKB01000764.1 Protein Homology CDS 8729 8962 . + 0 ID=cds-TGC92679.1;Parent=gene-C9F09_11850;Dbxref=NCBI_GP:TGC92679.1;Name=TGC92679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301923.1;locus_tag=C9F09_11850;product=hypothetical protein;protein_id=TGC92679.1;transl_table=11 PYKB01000764.1 Genbank gene 8959 9420 . + . ID=gene-C9F09_11855;Name=C9F09_11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11855 PYKB01000764.1 Protein Homology CDS 8959 9420 . + 0 ID=cds-TGC92680.1;Parent=gene-C9F09_11855;Dbxref=NCBI_GP:TGC92680.1;Name=TGC92680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=C9F09_11855;product=Lrp/AsnC family transcriptional regulator;protein_id=TGC92680.1;transl_table=11 PYKB01000764.1 Genbank gene 9621 11021 . + . ID=gene-C9F09_11860;Name=C9F09_11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11860 PYKB01000764.1 Protein Homology CDS 9621 11021 . + 0 ID=cds-TGC92681.1;Parent=gene-C9F09_11860;Dbxref=NCBI_GP:TGC92681.1;Name=TGC92681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=C9F09_11860;product=asparagine--tRNA ligase;protein_id=TGC92681.1;transl_table=11 PYKB01000764.1 Genbank gene 11627 12718 . + . ID=gene-C9F09_11865;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=C9F09_11865 PYKB01000764.1 Protein Homology CDS 11627 12718 . + 0 ID=cds-TGC92682.1;Parent=gene-C9F09_11865;Dbxref=NCBI_GP:TGC92682.1;Name=TGC92682.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455485.1;locus_tag=C9F09_11865;product=phosphoporin PhoE;protein_id=TGC92682.1;transl_table=11 ##sequence-region PYKB01000638.1 1 4975 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000638.1 Genbank region 1 4975 . + . ID=PYKB01000638.1:1..4975;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000638.1 Genbank gene 202 660 . + . ID=gene-C9F09_09545;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=C9F09_09545 PYKB01000638.1 Protein Homology CDS 202 660 . + 0 ID=cds-TGC94580.1;Parent=gene-C9F09_09545;Dbxref=NCBI_GP:TGC94580.1;Name=TGC94580.1;gbkey=CDS;gene=mgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455574.1;locus_tag=C9F09_09545;product=methylglyoxal synthase;protein_id=TGC94580.1;transl_table=11 PYKB01000638.1 Genbank gene 696 2750 . - . ID=gene-C9F09_09550;Name=C9F09_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09550 PYKB01000638.1 Protein Homology CDS 696 2750 . - 0 ID=cds-TGC94581.1;Parent=gene-C9F09_09550;Dbxref=NCBI_GP:TGC94581.1;Name=TGC94581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=C9F09_09550;product=DNA helicase IV;protein_id=TGC94581.1;transl_table=11 PYKB01000638.1 Genbank gene 2874 3320 . + . ID=gene-C9F09_09555;Name=C9F09_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09555 PYKB01000638.1 Protein Homology CDS 2874 3320 . + 0 ID=cds-TGC94582.1;Parent=gene-C9F09_09555;Dbxref=NCBI_GP:TGC94582.1;Name=TGC94582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455572.1;locus_tag=C9F09_09555;product=YccF domain-containing protein;protein_id=TGC94582.1;transl_table=11 PYKB01000638.1 Genbank gene 3339 4975 . + . ID=gene-C9F09_09560;Name=yccS;end_range=4975,.;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=C9F09_09560;partial=true PYKB01000638.1 Protein Homology CDS 3339 4975 . + 0 ID=cds-TGC94583.1;Parent=gene-C9F09_09560;Dbxref=NCBI_GP:TGC94583.1;Name=TGC94583.1;end_range=4975,.;gbkey=CDS;gene=yccS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=C9F09_09560;partial=true;product=TIGR01666 family membrane protein;protein_id=TGC94583.1;transl_table=11 ##sequence-region PYKB01001457.1 1 4974 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001457.1 Genbank region 1 4974 . + . ID=PYKB01001457.1:1..4974;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001457.1 Genbank gene 1 1922 . + . ID=gene-C9F09_25300;Name=C9F09_25300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25300;partial=true;start_range=.,1 PYKB01001457.1 Protein Homology CDS 1 1922 . + 2 ID=cds-TGC78079.1;Parent=gene-C9F09_25300;Dbxref=NCBI_GP:TGC78079.1;Name=TGC78079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458049.1;locus_tag=C9F09_25300;partial=true;product=DNA polymerase I;protein_id=TGC78079.1;start_range=.,1;transl_table=11 PYKB01001457.1 Genbank gene 2261 2896 . - . ID=gene-C9F09_25305;Name=C9F09_25305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25305 PYKB01001457.1 Protein Homology CDS 2261 2896 . - 0 ID=cds-TGC78080.1;Parent=gene-C9F09_25305;Dbxref=NCBI_GP:TGC78080.1;Name=TGC78080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458048.1;locus_tag=C9F09_25305;product=YihA family ribosome biogenesis GTP-binding protein;protein_id=TGC78080.1;transl_table=11 PYKB01001457.1 Genbank gene 3136 3360 . + . ID=gene-C9F09_25310;Name=C9F09_25310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25310 PYKB01001457.1 Protein Homology CDS 3136 3360 . + 0 ID=cds-TGC78081.1;Parent=gene-C9F09_25310;Dbxref=NCBI_GP:TGC78081.1;Name=TGC78081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=C9F09_25310;product=hypothetical protein;protein_id=TGC78081.1;transl_table=11 PYKB01001457.1 Genbank gene 3479 3994 . + . ID=gene-C9F09_25315;Name=C9F09_25315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25315 PYKB01001457.1 Protein Homology CDS 3479 3994 . + 0 ID=cds-TGC78082.1;Parent=gene-C9F09_25315;Dbxref=NCBI_GP:TGC78082.1;Name=TGC78082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458046.1;locus_tag=C9F09_25315;product=GTPase-activating protein;protein_id=TGC78082.1;transl_table=11 PYKB01001457.1 Genbank gene 4183 4974 . + . ID=gene-C9F09_25320;Name=hemN;end_range=4974,.;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=C9F09_25320;partial=true PYKB01001457.1 Protein Homology CDS 4183 4974 . + 0 ID=cds-TGC78083.1;Parent=gene-C9F09_25320;Dbxref=NCBI_GP:TGC78083.1;Name=TGC78083.1;end_range=4974,.;gbkey=CDS;gene=hemN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312816.2;locus_tag=C9F09_25320;partial=true;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=TGC78083.1;transl_table=11 ##sequence-region PYKB01000786.1 1 4973 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000786.1 Genbank region 1 4973 . + . ID=PYKB01000786.1:1..4973;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000786.1 Genbank gene 1 381 . - . ID=gene-C9F09_12160;Name=C9F09_12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12160;partial=true;start_range=.,1 PYKB01000786.1 Protein Homology CDS 1 381 . - 0 ID=cds-TGC92375.1;Parent=gene-C9F09_12160;Dbxref=NCBI_GP:TGC92375.1;Name=TGC92375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=C9F09_12160;partial=true;product=transketolase;protein_id=TGC92375.1;start_range=.,1;transl_table=11 PYKB01000786.1 Genbank gene 378 1769 . - . ID=gene-C9F09_12165;Name=C9F09_12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12165 PYKB01000786.1 Protein Homology CDS 378 1769 . - 0 ID=cds-TGC92376.1;Parent=gene-C9F09_12165;Dbxref=NCBI_GP:TGC92376.1;Name=TGC92376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=C9F09_12165;product=PTS ascorbate transporter subunit IIC;protein_id=TGC92376.1;transl_table=11 PYKB01000786.1 Genbank gene 1790 2062 . - . ID=gene-C9F09_12170;Name=C9F09_12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12170 PYKB01000786.1 Protein Homology CDS 1790 2062 . - 0 ID=cds-TGC92377.1;Parent=gene-C9F09_12170;Dbxref=NCBI_GP:TGC92377.1;Name=TGC92377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456885.1;locus_tag=C9F09_12170;product=PTS mannitol transporter subunit IIB;protein_id=TGC92377.1;transl_table=11 PYKB01000786.1 Genbank gene 2143 2586 . - . ID=gene-C9F09_12175;Name=C9F09_12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12175 PYKB01000786.1 Protein Homology CDS 2143 2586 . - 0 ID=cds-TGC92378.1;Parent=gene-C9F09_12175;Dbxref=NCBI_GP:TGC92378.1;Name=TGC92378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=C9F09_12175;product=PTS ascorbate transporter subunit IIA;protein_id=TGC92378.1;transl_table=11 PYKB01000786.1 Genbank gene 2585 2758 . + . ID=gene-C9F09_12180;Name=C9F09_12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12180 PYKB01000786.1 Protein Homology CDS 2585 2758 . + 0 ID=cds-TGC92379.1;Parent=gene-C9F09_12180;Dbxref=NCBI_GP:TGC92379.1;Name=TGC92379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991991.1;locus_tag=C9F09_12180;product=hypothetical protein;protein_id=TGC92379.1;transl_table=11 PYKB01000786.1 Genbank gene 2839 3858 . + . ID=gene-C9F09_12185;Name=C9F09_12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12185 PYKB01000786.1 Protein Homology CDS 2839 3858 . + 0 ID=cds-TGC92380.1;Parent=gene-C9F09_12185;Dbxref=NCBI_GP:TGC92380.1;Name=TGC92380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=C9F09_12185;product=transcriptional regulator;protein_id=TGC92380.1;transl_table=11 PYKB01000786.1 Genbank gene 3864 4418 . - . ID=gene-C9F09_12190;Name=C9F09_12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12190 PYKB01000786.1 Protein Homology CDS 3864 4418 . - 0 ID=cds-TGC92381.1;Parent=gene-C9F09_12190;Dbxref=NCBI_GP:TGC92381.1;Name=TGC92381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456888.1;locus_tag=C9F09_12190;product=NUDIX hydrolase;protein_id=TGC92381.1;transl_table=11 PYKB01000786.1 Genbank gene 4475 4973 . - . ID=gene-C9F09_12195;Name=C9F09_12195;end_range=4973,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12195;partial=true PYKB01000786.1 Protein Homology CDS 4475 4973 . - 1 ID=cds-TGC92382.1;Parent=gene-C9F09_12195;Dbxref=NCBI_GP:TGC92382.1;Name=TGC92382.1;end_range=4973,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456889.1;locus_tag=C9F09_12195;partial=true;product=phosphodiesterase;protein_id=TGC92382.1;transl_table=11 ##sequence-region PYKB01000694.1 1 4969 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000694.1 Genbank region 1 4969 . + . ID=PYKB01000694.1:1..4969;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000694.1 Genbank gene 1 743 . - . ID=gene-C9F09_10560;Name=C9F09_10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10560;partial=true;start_range=.,1 PYKB01000694.1 Protein Homology CDS 1 743 . - 0 ID=cds-TGC93798.1;Parent=gene-C9F09_10560;Dbxref=NCBI_GP:TGC93798.1;Name=TGC93798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457006.1;locus_tag=C9F09_10560;partial=true;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=TGC93798.1;start_range=.,1;transl_table=11 PYKB01000694.1 Genbank gene 745 945 . + . ID=gene-C9F09_10565;Name=C9F09_10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10565 PYKB01000694.1 Protein Homology CDS 745 945 . + 0 ID=cds-TGC93799.1;Parent=gene-C9F09_10565;Dbxref=NCBI_GP:TGC93799.1;Name=TGC93799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653373.1;locus_tag=C9F09_10565;product=hypothetical protein;protein_id=TGC93799.1;transl_table=11 PYKB01000694.1 Genbank gene 1015 1965 . + . ID=gene-C9F09_10570;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=C9F09_10570 PYKB01000694.1 Protein Homology CDS 1015 1965 . + 0 ID=cds-TGC93800.1;Parent=gene-C9F09_10570;Dbxref=NCBI_GP:TGC93800.1;Name=TGC93800.1;gbkey=CDS;gene=tal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457007.1;locus_tag=C9F09_10570;product=transaldolase;protein_id=TGC93800.1;transl_table=11 PYKB01000694.1 Genbank gene 1985 3985 . + . ID=gene-C9F09_10575;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=C9F09_10575 PYKB01000694.1 Protein Homology CDS 1985 3985 . + 0 ID=cds-TGC93801.1;Parent=gene-C9F09_10575;Dbxref=NCBI_GP:TGC93801.1;Name=TGC93801.1;gbkey=CDS;gene=tkt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=C9F09_10575;product=transketolase;protein_id=TGC93801.1;transl_table=11 PYKB01000694.1 Genbank gene 4048 4278 . - . ID=gene-C9F09_10580;Name=C9F09_10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10580 PYKB01000694.1 Protein Homology CDS 4048 4278 . - 0 ID=cds-TGC93802.1;Parent=gene-C9F09_10580;Dbxref=NCBI_GP:TGC93802.1;Name=TGC93802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=C9F09_10580;product=hypothetical protein;protein_id=TGC93802.1;transl_table=11 PYKB01000694.1 Genbank gene 4406 4969 . - . ID=gene-C9F09_10585;Name=C9F09_10585;end_range=4969,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10585;partial=true PYKB01000694.1 Protein Homology CDS 4406 4969 . - 0 ID=cds-TGC93803.1;Parent=gene-C9F09_10585;Dbxref=NCBI_GP:TGC93803.1;Name=TGC93803.1;end_range=4969,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457010.1;locus_tag=C9F09_10585;partial=true;product=DUF1176 domain-containing protein;protein_id=TGC93803.1;transl_table=11 ##sequence-region PYKB01000966.1 1 4944 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000966.1 Genbank region 1 4944 . + . ID=PYKB01000966.1:1..4944;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000966.1 Genbank pseudogene 75 353 . + . ID=gene-C9F09_15980;Name=C9F09_15980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15980;pseudo=true PYKB01000966.1 Protein Homology CDS 75 353 . + 0 ID=cds-C9F09_15980;Parent=gene-C9F09_15980;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455089.1;locus_tag=C9F09_15980;product=MFS transporter;pseudo=true;transl_table=11 PYKB01000966.1 Genbank gene 568 2244 . + . ID=gene-C9F09_15985;Name=C9F09_15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15985 PYKB01000966.1 Protein Homology CDS 568 2244 . + 0 ID=cds-TGC88966.1;Parent=gene-C9F09_15985;Dbxref=NCBI_GP:TGC88966.1;Name=TGC88966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455088.1;locus_tag=C9F09_15985;product=Kef family K(+) transporter;protein_id=TGC88966.1;transl_table=11 PYKB01000966.1 Genbank gene 2293 3597 . - . ID=gene-C9F09_15990;Name=C9F09_15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15990 PYKB01000966.1 Protein Homology CDS 2293 3597 . - 0 ID=cds-TGC88968.1;Parent=gene-C9F09_15990;Dbxref=NCBI_GP:TGC88968.1;Name=TGC88968.1;Note=catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=C9F09_15990;product=inosine/guanosine kinase;protein_id=TGC88968.1;transl_table=11 PYKB01000966.1 Genbank gene 3750 4721 . + . ID=gene-C9F09_15995;Name=C9F09_15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15995 PYKB01000966.1 Protein Homology CDS 3750 4721 . + 0 ID=cds-TGC88967.1;Parent=gene-C9F09_15995;Dbxref=NCBI_GP:TGC88967.1;Name=TGC88967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=C9F09_15995;product=acetyl esterase;protein_id=TGC88967.1;transl_table=11 PYKB01000966.1 Genbank gene 4718 4944 . - . ID=gene-C9F09_16000;Name=C9F09_16000;end_range=4944,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16000;partial=true PYKB01000966.1 Protein Homology CDS 4718 4944 . - 2 ID=cds-TGC88969.1;Parent=gene-C9F09_16000;Dbxref=NCBI_GP:TGC88969.1;Name=TGC88969.1;end_range=4944,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=C9F09_16000;partial=true;product=ferrochelatase;protein_id=TGC88969.1;transl_table=11 ##sequence-region PYKB01001693.1 1 4934 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001693.1 Genbank region 1 4934 . + . ID=PYKB01001693.1:1..4934;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001693.1 Genbank pseudogene 65 178 . - . ID=gene-C9F09_29555;Name=C9F09_29555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29555;pseudo=true PYKB01001693.1 Protein Homology CDS 65 178 . - 0 ID=cds-C9F09_29555;Parent=gene-C9F09_29555;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456784.1;locus_tag=C9F09_29555;product=nucleoid-associated protein YejK;pseudo=true;transl_table=11 PYKB01001693.1 Genbank gene 358 585 . + . ID=gene-C9F09_29560;Name=C9F09_29560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29560 PYKB01001693.1 Protein Homology CDS 358 585 . + 0 ID=cds-TGC72365.1;Parent=gene-C9F09_29560;Dbxref=NCBI_GP:TGC72365.1;Name=TGC72365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456785.1;locus_tag=C9F09_29560;product=hypothetical protein;protein_id=TGC72365.1;transl_table=11 PYKB01001693.1 Genbank pseudogene 617 2377 . + . ID=gene-C9F09_29565;Name=C9F09_29565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29565;pseudo=true PYKB01001693.1 Protein Homology CDS 617 2377 . + 0 ID=cds-C9F09_29565;Parent=gene-C9F09_29565;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=C9F09_29565;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001693.1 Genbank gene 2451 2527 . + . ID=gene-C9F09_29570;Name=C9F09_29570;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_29570 PYKB01001693.1 tRNAscan-SE tRNA 2451 2527 . + . ID=rna-C9F09_29570;Parent=gene-C9F09_29570;anticodon=(pos:2485..2487);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_29570;product=tRNA-Pro PYKB01001693.1 tRNAscan-SE exon 2451 2527 . + . ID=exon-C9F09_29570-1;Parent=rna-C9F09_29570;anticodon=(pos:2485..2487);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_29570;product=tRNA-Pro PYKB01001693.1 Genbank gene 2569 2757 . + . ID=gene-C9F09_29575;Name=C9F09_29575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29575 PYKB01001693.1 Protein Homology CDS 2569 2757 . + 0 ID=cds-TGC72366.1;Parent=gene-C9F09_29575;Dbxref=NCBI_GP:TGC72366.1;Name=TGC72366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456789.1;locus_tag=C9F09_29575;product=virulence protein MsgA;protein_id=TGC72366.1;transl_table=11 PYKB01001693.1 Genbank gene 2949 3512 . - . ID=gene-C9F09_29580;Name=C9F09_29580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29580 PYKB01001693.1 Protein Homology CDS 2949 3512 . - 0 ID=cds-TGC72367.1;Parent=gene-C9F09_29580;Dbxref=NCBI_GP:TGC72367.1;Name=TGC72367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=C9F09_29580;product=acyloxyacyl hydrolase;protein_id=TGC72367.1;transl_table=11 PYKB01001693.1 Genbank pseudogene 3503 3700 . - . ID=gene-C9F09_29585;Name=C9F09_29585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29585;pseudo=true PYKB01001693.1 Protein Homology CDS 3503 3700 . - 0 ID=cds-C9F09_29585;Parent=gene-C9F09_29585;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530362.1;locus_tag=C9F09_29585;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001693.1 Genbank gene 4185 4331 . - . ID=gene-C9F09_29590;Name=C9F09_29590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29590 PYKB01001693.1 Protein Homology CDS 4185 4331 . - 0 ID=cds-TGC72368.1;Parent=gene-C9F09_29590;Dbxref=NCBI_GP:TGC72368.1;Name=TGC72368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554888.1;locus_tag=C9F09_29590;product=transcriptional regulator;protein_id=TGC72368.1;transl_table=11 PYKB01001693.1 Genbank gene 4330 4934 . + . ID=gene-C9F09_29595;Name=C9F09_29595;end_range=4934,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29595;partial=true PYKB01001693.1 Protein Homology CDS 4330 4934 . + 0 ID=cds-TGC72369.1;Parent=gene-C9F09_29595;Dbxref=NCBI_GP:TGC72369.1;Name=TGC72369.1;Note=nitrate/nitrite response regulator NarP%3B NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems%3B represses expression of other anaerobic genes;end_range=4934,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=C9F09_29595;partial=true;product=DNA-binding response regulator;protein_id=TGC72369.1;transl_table=11 ##sequence-region PYKB01000424.1 1 4922 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000424.1 Genbank region 1 4922 . + . ID=PYKB01000424.1:1..4922;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000424.1 Genbank pseudogene 1 187 . - . ID=gene-C9F09_04945;Name=C9F09_04945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04945;pseudo=true PYKB01000424.1 Protein Homology CDS 1 187 . - 0 ID=cds-C9F09_04945;Parent=gene-C9F09_04945;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457484.1;locus_tag=C9F09_04945;product=SprT family protein;pseudo=true;transl_table=11 PYKB01000424.1 Genbank gene 266 1660 . - . ID=gene-C9F09_04950;Name=C9F09_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04950 PYKB01000424.1 Protein Homology CDS 266 1660 . - 0 ID=cds-TGC99133.1;Parent=gene-C9F09_04950;Dbxref=NCBI_GP:TGC99133.1;Name=TGC99133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457483.1;locus_tag=C9F09_04950;product=sugar porter family MFS transporter;protein_id=TGC99133.1;transl_table=11 PYKB01000424.1 Genbank gene 2153 3307 . - . ID=gene-C9F09_04955;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=C9F09_04955 PYKB01000424.1 Protein Homology CDS 2153 3307 . - 0 ID=cds-TGC99134.1;Parent=gene-C9F09_04955;Dbxref=NCBI_GP:TGC99134.1;Name=TGC99134.1;gbkey=CDS;gene=metK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=C9F09_04955;product=S-adenosylmethionine synthase;protein_id=TGC99134.1;transl_table=11 PYKB01000424.1 Genbank gene 3363 3662 . + . ID=gene-C9F09_04960;Name=C9F09_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04960 PYKB01000424.1 Protein Homology CDS 3363 3662 . + 0 ID=cds-TGC99136.1;Parent=gene-C9F09_04960;Dbxref=NCBI_GP:TGC99136.1;Name=TGC99136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462005.1;locus_tag=C9F09_04960;product=DUF2684 domain-containing protein;protein_id=TGC99136.1;transl_table=11 PYKB01000424.1 Genbank pseudogene 3618 3823 . - . ID=gene-C9F09_04965;Name=C9F09_04965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04965;pseudo=true PYKB01000424.1 Protein Homology CDS 3618 3823 . - 0 ID=cds-C9F09_04965;Parent=gene-C9F09_04965;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311843.1;locus_tag=C9F09_04965;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000424.1 Genbank gene 3957 4088 . + . ID=gene-C9F09_04970;Name=C9F09_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04970 PYKB01000424.1 Protein Homology CDS 3957 4088 . + 0 ID=cds-TGC99135.1;Parent=gene-C9F09_04970;Dbxref=NCBI_GP:TGC99135.1;Name=TGC99135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457480.1;locus_tag=C9F09_04970;product=virulence promoting factor;protein_id=TGC99135.1;transl_table=11 PYKB01000424.1 Genbank pseudogene 4097 4922 . + . ID=gene-C9F09_04975;Name=C9F09_04975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04975;pseudo=true PYKB01000424.1 Protein Homology CDS 4097 4922 . + 0 ID=cds-C9F09_04975;Parent=gene-C9F09_04975;Note=catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457479.1;locus_tag=C9F09_04975;product=arginine decarboxylase;pseudo=true;transl_table=11 ##sequence-region PYKB01000449.1 1 4920 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000449.1 Genbank region 1 4920 . + . ID=PYKB01000449.1:1..4920;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000449.1 Genbank gene 1 584 . + . ID=gene-C9F09_05570;Name=C9F09_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05570;partial=true;start_range=.,1 PYKB01000449.1 Protein Homology CDS 1 584 . + 2 ID=cds-TGC98648.1;Parent=gene-C9F09_05570;Dbxref=NCBI_GP:TGC98648.1;Name=TGC98648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455883.1;locus_tag=C9F09_05570;partial=true;product=hypothetical protein;protein_id=TGC98648.1;start_range=.,1;transl_table=11 PYKB01000449.1 Genbank gene 598 1404 . + . ID=gene-C9F09_05575;Name=C9F09_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05575 PYKB01000449.1 Protein Homology CDS 598 1404 . + 0 ID=cds-TGC98649.1;Parent=gene-C9F09_05575;Dbxref=NCBI_GP:TGC98649.1;Name=TGC98649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=C9F09_05575;product=SgcQ protein;protein_id=TGC98649.1;transl_table=11 PYKB01000449.1 Genbank gene 1536 1973 . + . ID=gene-C9F09_05580;Name=C9F09_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05580 PYKB01000449.1 Protein Homology CDS 1536 1973 . + 0 ID=cds-TGC98650.1;Parent=gene-C9F09_05580;Dbxref=NCBI_GP:TGC98650.1;Name=TGC98650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455881.1;locus_tag=C9F09_05580;product=PTS sugar transporter subunit IIA;protein_id=TGC98650.1;transl_table=11 PYKB01000449.1 Genbank gene 1985 2617 . + . ID=gene-C9F09_05585;Name=C9F09_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05585 PYKB01000449.1 Protein Homology CDS 1985 2617 . + 0 ID=cds-TGC98651.1;Parent=gene-C9F09_05585;Dbxref=NCBI_GP:TGC98651.1;Name=TGC98651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455880.1;locus_tag=C9F09_05585;product=epimerase;protein_id=TGC98651.1;transl_table=11 PYKB01000449.1 Genbank gene 2633 3424 . + . ID=gene-C9F09_05590;Name=C9F09_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05590 PYKB01000449.1 Protein Homology CDS 2633 3424 . + 0 ID=cds-TGC98654.1;Parent=gene-C9F09_05590;Dbxref=NCBI_GP:TGC98654.1;Name=TGC98654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455879.1;locus_tag=C9F09_05590;product=DeoR/GlpR transcriptional regulator;protein_id=TGC98654.1;transl_table=11 PYKB01000449.1 Genbank gene 3424 3861 . + . ID=gene-C9F09_05595;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=C9F09_05595 PYKB01000449.1 Protein Homology CDS 3424 3861 . + 0 ID=cds-TGC98652.1;Parent=gene-C9F09_05595;Dbxref=NCBI_GP:TGC98652.1;Name=TGC98652.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=C9F09_05595;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=TGC98652.1;transl_table=11 PYKB01000449.1 Genbank gene 3908 4920 . - . ID=gene-C9F09_05600;Name=C9F09_05600;end_range=4920,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05600;partial=true PYKB01000449.1 Protein Homology CDS 3908 4920 . - 2 ID=cds-TGC98653.1;Parent=gene-C9F09_05600;Dbxref=NCBI_GP:TGC98653.1;Name=TGC98653.1;end_range=4920,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460579.1;locus_tag=C9F09_05600;partial=true;product=lactate oxidase;protein_id=TGC98653.1;transl_table=11 ##sequence-region PYKB01000952.1 1 4915 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000952.1 Genbank region 1 4915 . + . ID=PYKB01000952.1:1..4915;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000952.1 Genbank pseudogene 97 276 . - . ID=gene-C9F09_15735;Name=C9F09_15735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15735;pseudo=true PYKB01000952.1 Protein Homology CDS 97 276 . - 0 ID=cds-C9F09_15735;Parent=gene-C9F09_15735;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454834.1;locus_tag=C9F09_15735;product=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ;pseudo=true;transl_table=11 PYKB01000952.1 Genbank gene 382 1407 . - . ID=gene-C9F09_15740;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=C9F09_15740 PYKB01000952.1 Protein Homology CDS 382 1407 . - 0 ID=cds-TGC89256.1;Parent=gene-C9F09_15740;Dbxref=NCBI_GP:TGC89256.1;Name=TGC89256.1;gbkey=CDS;gene=lpxD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=C9F09_15740;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=TGC89256.1;transl_table=11 PYKB01000952.1 Genbank gene 1411 1896 . - . ID=gene-C9F09_15745;Name=C9F09_15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15745 PYKB01000952.1 Protein Homology CDS 1411 1896 . - 0 ID=cds-TGC89257.1;Parent=gene-C9F09_15745;Dbxref=NCBI_GP:TGC89257.1;Name=TGC89257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454832.1;locus_tag=C9F09_15745;product=chaperone protein Skp;protein_id=TGC89257.1;transl_table=11 PYKB01000952.1 Genbank gene 2019 4430 . - . ID=gene-C9F09_15750;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=C9F09_15750 PYKB01000952.1 Protein Homology CDS 2019 4430 . - 0 ID=cds-TGC89258.1;Parent=gene-C9F09_15750;Dbxref=NCBI_GP:TGC89258.1;Name=TGC89258.1;gbkey=CDS;gene=bamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454831.1;locus_tag=C9F09_15750;product=outer membrane protein assembly factor BamA;protein_id=TGC89258.1;transl_table=11 PYKB01000952.1 Genbank gene 4462 4915 . - . ID=gene-C9F09_15755;Name=rseP;end_range=4915,.;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=C9F09_15755;partial=true PYKB01000952.1 Protein Homology CDS 4462 4915 . - 1 ID=cds-TGC89259.1;Parent=gene-C9F09_15755;Dbxref=NCBI_GP:TGC89259.1;Name=TGC89259.1;end_range=4915,.;gbkey=CDS;gene=rseP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=C9F09_15755;partial=true;product=RIP metalloprotease RseP;protein_id=TGC89259.1;transl_table=11 ##sequence-region PYKB01000836.1 1 4893 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000836.1 Genbank region 1 4893 . + . ID=PYKB01000836.1:1..4893;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000836.1 Genbank pseudogene 20 310 . + . ID=gene-C9F09_13195;Name=C9F09_13195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13195;pseudo=true PYKB01000836.1 Protein Homology CDS 20 310 . + 0 ID=cds-C9F09_13195;Parent=gene-C9F09_13195;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456962.1;locus_tag=C9F09_13195;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000836.1 Genbank gene 307 525 . - . ID=gene-C9F09_13200;Name=C9F09_13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13200 PYKB01000836.1 Protein Homology CDS 307 525 . - 0 ID=cds-TGC91529.1;Parent=gene-C9F09_13200;Dbxref=NCBI_GP:TGC91529.1;Name=TGC91529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_944557.1;locus_tag=C9F09_13200;product=hypothetical protein;protein_id=TGC91529.1;transl_table=11 PYKB01000836.1 Genbank gene 527 2542 . - . ID=gene-C9F09_13205;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=C9F09_13205 PYKB01000836.1 Protein Homology CDS 527 2542 . - 0 ID=cds-TGC91530.1;Parent=gene-C9F09_13205;Dbxref=NCBI_GP:TGC91530.1;Name=TGC91530.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456964.1;locus_tag=C9F09_13205;product=DNA ligase;protein_id=TGC91530.1;transl_table=11 PYKB01000836.1 Genbank gene 2614 3600 . - . ID=gene-C9F09_13210;Name=C9F09_13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13210 PYKB01000836.1 Protein Homology CDS 2614 3600 . - 0 ID=cds-TGC91531.1;Parent=gene-C9F09_13210;Dbxref=NCBI_GP:TGC91531.1;Name=TGC91531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456965.1;locus_tag=C9F09_13210;product=cell division protein ZipA;protein_id=TGC91531.1;transl_table=11 PYKB01000836.1 Genbank gene 3832 4593 . + . ID=gene-C9F09_13215;Name=C9F09_13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13215 PYKB01000836.1 Protein Homology CDS 3832 4593 . + 0 ID=cds-TGC91532.1;Parent=gene-C9F09_13215;Dbxref=NCBI_GP:TGC91532.1;Name=TGC91532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456966.1;locus_tag=C9F09_13215;product=sulfate transporter CysZ;protein_id=TGC91532.1;transl_table=11 PYKB01000836.1 Genbank gene 4757 4893 . + . ID=gene-C9F09_13220;Name=C9F09_13220;end_range=4893,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13220;partial=true PYKB01000836.1 Protein Homology CDS 4757 4893 . + 0 ID=cds-TGC91533.1;Parent=gene-C9F09_13220;Dbxref=NCBI_GP:TGC91533.1;Name=TGC91533.1;end_range=4893,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=C9F09_13220;partial=true;product=cysteine synthase;protein_id=TGC91533.1;transl_table=11 ##sequence-region PYKB01000819.1 1 12850 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000819.1 Genbank region 1 12850 . + . ID=PYKB01000819.1:1..12850;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000819.1 Genbank pseudogene 64 504 . + . ID=gene-C9F09_12805;Name=C9F09_12805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12805;pseudo=true PYKB01000819.1 Protein Homology CDS 64 504 . + 0 ID=cds-C9F09_12805;Parent=gene-C9F09_12805;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=C9F09_12805;product=multidrug ABC transporter permease/ATP-binding protein;pseudo=true;transl_table=11 PYKB01000819.1 Genbank gene 717 1055 . + . ID=gene-C9F09_12810;Name=C9F09_12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12810 PYKB01000819.1 Protein Homology CDS 717 1055 . + 0 ID=cds-TGC91846.1;Parent=gene-C9F09_12810;Dbxref=NCBI_GP:TGC91846.1;Name=TGC91846.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455060.1;locus_tag=C9F09_12810;product=P-II family nitrogen regulator;protein_id=TGC91846.1;transl_table=11 PYKB01000819.1 Genbank gene 1087 2373 . + . ID=gene-C9F09_12815;Name=C9F09_12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12815 PYKB01000819.1 Protein Homology CDS 1087 2373 . + 0 ID=cds-TGC91847.1;Parent=gene-C9F09_12815;Dbxref=NCBI_GP:TGC91847.1;Name=TGC91847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455061.1;locus_tag=C9F09_12815;product=ammonium transporter AmtB;protein_id=TGC91847.1;transl_table=11 PYKB01000819.1 Genbank gene 2473 3333 . - . ID=gene-C9F09_12820;Name=C9F09_12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12820 PYKB01000819.1 Protein Homology CDS 2473 3333 . - 0 ID=cds-TGC91848.1;Parent=gene-C9F09_12820;Dbxref=NCBI_GP:TGC91848.1;Name=TGC91848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455062.1;locus_tag=C9F09_12820;product=acyl-CoA thioesterase II;protein_id=TGC91848.1;transl_table=11 PYKB01000819.1 Genbank gene 3548 4117 . + . ID=gene-C9F09_12825;Name=C9F09_12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12825 PYKB01000819.1 Protein Homology CDS 3548 4117 . + 0 ID=cds-TGC91849.1;Parent=gene-C9F09_12825;Dbxref=NCBI_GP:TGC91849.1;Name=TGC91849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455063.1;locus_tag=C9F09_12825;product=hypothetical protein;protein_id=TGC91849.1;transl_table=11 PYKB01000819.1 Genbank gene 4150 4539 . - . ID=gene-C9F09_12830;Name=C9F09_12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12830 PYKB01000819.1 Protein Homology CDS 4150 4539 . - 0 ID=cds-TGC91850.1;Parent=gene-C9F09_12830;Dbxref=NCBI_GP:TGC91850.1;Name=TGC91850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455064.1;locus_tag=C9F09_12830;product=methyltransferase;protein_id=TGC91850.1;transl_table=11 PYKB01000819.1 Genbank gene 4624 4720 . + . ID=gene-C9F09_12835;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=C9F09_12835 PYKB01000819.1 cmsearch SRP_RNA 4624 4720 . + . ID=rna-C9F09_12835;Parent=gene-C9F09_12835;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00169,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_12835;product=signal recognition particle sRNA small type PYKB01000819.1 cmsearch exon 4624 4720 . + . ID=exon-C9F09_12835-1;Parent=rna-C9F09_12835;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00169,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_12835;product=signal recognition particle sRNA small type PYKB01000819.1 Genbank gene 4770 6320 . - . ID=gene-C9F09_12840;Name=C9F09_12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12840 PYKB01000819.1 Protein Homology CDS 4770 6320 . - 0 ID=cds-TGC91851.1;Parent=gene-C9F09_12840;Dbxref=NCBI_GP:TGC91851.1;Name=TGC91851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=C9F09_12840;product=hypothetical protein;protein_id=TGC91851.1;transl_table=11 PYKB01000819.1 Genbank gene 6545 6805 . + . ID=gene-C9F09_12845;Name=C9F09_12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12845 PYKB01000819.1 Protein Homology CDS 6545 6805 . + 0 ID=cds-TGC91852.1;Parent=gene-C9F09_12845;Dbxref=NCBI_GP:TGC91852.1;Name=TGC91852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455066.1;locus_tag=C9F09_12845;product=50S ribosomal protein L31 type B;protein_id=TGC91852.1;transl_table=11 PYKB01000819.1 Genbank gene 6811 6951 . + . ID=gene-C9F09_12850;Name=C9F09_12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12850 PYKB01000819.1 Protein Homology CDS 6811 6951 . + 0 ID=cds-TGC91853.1;Parent=gene-C9F09_12850;Dbxref=NCBI_GP:TGC91853.1;Name=TGC91853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455067.1;locus_tag=C9F09_12850;product=50S ribosomal protein L36;protein_id=TGC91853.1;transl_table=11 PYKB01000819.1 Genbank gene 7007 7477 . - . ID=gene-C9F09_12855;Name=C9F09_12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12855 PYKB01000819.1 Protein Homology CDS 7007 7477 . - 0 ID=cds-TGC91854.1;Parent=gene-C9F09_12855;Dbxref=NCBI_GP:TGC91854.1;Name=TGC91854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455068.1;locus_tag=C9F09_12855;product=hypothetical protein;protein_id=TGC91854.1;transl_table=11 PYKB01000819.1 Genbank gene 7595 8146 . - . ID=gene-C9F09_12860;Name=C9F09_12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12860 PYKB01000819.1 Protein Homology CDS 7595 8146 . - 0 ID=cds-TGC91855.1;Parent=gene-C9F09_12860;Dbxref=NCBI_GP:TGC91855.1;Name=TGC91855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455069.1;locus_tag=C9F09_12860;product=maltose O-acetyltransferase;protein_id=TGC91855.1;transl_table=11 PYKB01000819.1 Genbank gene 8325 8543 . - . ID=gene-C9F09_12865;Name=C9F09_12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12865 PYKB01000819.1 Protein Homology CDS 8325 8543 . - 0 ID=cds-TGC91856.1;Parent=gene-C9F09_12865;Dbxref=NCBI_GP:TGC91856.1;Name=TGC91856.1;Note=with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455070.1;locus_tag=C9F09_12865;product=hemolysin expression-modulating protein Hha;protein_id=TGC91856.1;transl_table=11 PYKB01000819.1 Genbank gene 8571 8945 . - . ID=gene-C9F09_12870;Name=C9F09_12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12870 PYKB01000819.1 Protein Homology CDS 8571 8945 . - 0 ID=cds-TGC91857.1;Parent=gene-C9F09_12870;Dbxref=NCBI_GP:TGC91857.1;Name=TGC91857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=C9F09_12870;product=Hha toxicity attenuator;protein_id=TGC91857.1;transl_table=11 PYKB01000819.1 Genbank gene 9441 12590 . - . ID=gene-C9F09_12875;Name=C9F09_12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12875 PYKB01000819.1 Protein Homology CDS 9441 12590 . - 0 ID=cds-TGC91858.1;Parent=gene-C9F09_12875;Dbxref=NCBI_GP:TGC91858.1;Name=TGC91858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=C9F09_12875;product=hydrophobe/amphiphile efflux-1 family RND transporter;protein_id=TGC91858.1;transl_table=11 PYKB01000819.1 Genbank gene 12583 12850 . - . ID=gene-C9F09_12880;Name=C9F09_12880;end_range=12850,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12880;partial=true PYKB01000819.1 Protein Homology CDS 12583 12850 . - 1 ID=cds-TGC91859.1;Parent=gene-C9F09_12880;Dbxref=NCBI_GP:TGC91859.1;Name=TGC91859.1;end_range=12850,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455073.1;locus_tag=C9F09_12880;partial=true;product=hypothetical protein;protein_id=TGC91859.1;transl_table=11 ##sequence-region PYKB01000831.1 1 4880 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000831.1 Genbank region 1 4880 . + . ID=PYKB01000831.1:1..4880;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000831.1 Genbank gene 61 1020 . + . ID=gene-C9F09_13090;Name=C9F09_13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13090 PYKB01000831.1 Protein Homology CDS 61 1020 . + 0 ID=cds-TGC91608.1;Parent=gene-C9F09_13090;Dbxref=NCBI_GP:TGC91608.1;Name=TGC91608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=C9F09_13090;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=TGC91608.1;transl_table=11 PYKB01000831.1 Genbank gene 1176 1919 . + . ID=gene-C9F09_13095;Name=C9F09_13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13095 PYKB01000831.1 Protein Homology CDS 1176 1919 . + 0 ID=cds-TGC91612.1;Parent=gene-C9F09_13095;Dbxref=NCBI_GP:TGC91612.1;Name=TGC91612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=C9F09_13095;product=DUF3053 domain-containing protein;protein_id=TGC91612.1;transl_table=11 PYKB01000831.1 Genbank gene 2125 2349 . + . ID=gene-C9F09_13100;Name=C9F09_13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13100 PYKB01000831.1 Protein Homology CDS 2125 2349 . + 0 ID=cds-TGC91609.1;Parent=gene-C9F09_13100;Dbxref=NCBI_GP:TGC91609.1;Name=TGC91609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528424.1;locus_tag=C9F09_13100;product=hypothetical protein;protein_id=TGC91609.1;transl_table=11 PYKB01000831.1 Genbank pseudogene 2421 3005 . - . ID=gene-C9F09_13105;Name=C9F09_13105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13105;pseudo=true PYKB01000831.1 Protein Homology CDS 2421 3005 . - 0 ID=cds-C9F09_13105;Parent=gene-C9F09_13105;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=C9F09_13105;product=septum formation inhibitor Maf;pseudo=true;transl_table=11 PYKB01000831.1 Genbank gene 3203 3724 . + . ID=gene-C9F09_13110;Name=C9F09_13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13110 PYKB01000831.1 Protein Homology CDS 3203 3724 . + 0 ID=cds-TGC91610.1;Parent=gene-C9F09_13110;Dbxref=NCBI_GP:TGC91610.1;Name=TGC91610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=C9F09_13110;product=23S rRNA accumulation protein YceD;protein_id=TGC91610.1;transl_table=11 PYKB01000831.1 Genbank gene 3776 3949 . + . ID=gene-C9F09_13115;Name=C9F09_13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13115 PYKB01000831.1 Protein Homology CDS 3776 3949 . + 0 ID=cds-TGC91611.1;Parent=gene-C9F09_13115;Dbxref=NCBI_GP:TGC91611.1;Name=TGC91611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=C9F09_13115;product=50S ribosomal protein L32;protein_id=TGC91611.1;transl_table=11 PYKB01000831.1 Genbank pseudogene 4083 4862 . + . ID=gene-C9F09_13120;Name=C9F09_13120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13120;pseudo=true PYKB01000831.1 Protein Homology CDS 4083 4862 . + 0 ID=cds-C9F09_13120;Parent=gene-C9F09_13120;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455685.1;locus_tag=C9F09_13120;product=phosphate acyltransferase PlsX;pseudo=true;transl_table=11 ##sequence-region PYKB01001249.1 1 4869 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001249.1 Genbank region 1 4869 . + . ID=PYKB01001249.1:1..4869;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001249.1 Genbank gene 1 778 . + . ID=gene-C9F09_21285;Name=C9F09_21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21285;partial=true;start_range=.,1 PYKB01001249.1 Protein Homology CDS 1 778 . + 1 ID=cds-TGC82439.1;Parent=gene-C9F09_21285;Dbxref=NCBI_GP:TGC82439.1;Name=TGC82439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=C9F09_21285;partial=true;product=L-lactate dehydrogenase;protein_id=TGC82439.1;start_range=.,1;transl_table=11 PYKB01001249.1 Genbank gene 843 1316 . + . ID=gene-C9F09_21290;Name=C9F09_21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21290 PYKB01001249.1 Protein Homology CDS 843 1316 . + 0 ID=cds-TGC82440.1;Parent=gene-C9F09_21290;Dbxref=NCBI_GP:TGC82440.1;Name=TGC82440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=C9F09_21290;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=TGC82440.1;transl_table=11 PYKB01001249.1 Genbank gene 1384 2439 . - . ID=gene-C9F09_21295;Name=C9F09_21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21295 PYKB01001249.1 Protein Homology CDS 1384 2439 . - 0 ID=cds-TGC82441.1;Parent=gene-C9F09_21295;Dbxref=NCBI_GP:TGC82441.1;Name=TGC82441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458230.1;locus_tag=C9F09_21295;product=GntR family transcriptional regulator;protein_id=TGC82441.1;transl_table=11 PYKB01001249.1 Genbank gene 2438 2689 . + . ID=gene-C9F09_21300;Name=C9F09_21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21300 PYKB01001249.1 Protein Homology CDS 2438 2689 . + 0 ID=cds-TGC82442.1;Parent=gene-C9F09_21300;Dbxref=NCBI_GP:TGC82442.1;Name=TGC82442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752098.1;locus_tag=C9F09_21300;product=hypothetical protein;protein_id=TGC82442.1;transl_table=11 PYKB01001249.1 Genbank gene 2707 3903 . + . ID=gene-C9F09_21305;Name=C9F09_21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21305 PYKB01001249.1 Protein Homology CDS 2707 3903 . + 0 ID=cds-TGC82443.1;Parent=gene-C9F09_21305;Dbxref=NCBI_GP:TGC82443.1;Name=TGC82443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=C9F09_21305;product=L-talarate/galactarate dehydratase;protein_id=TGC82443.1;transl_table=11 PYKB01001249.1 Genbank gene 3977 4869 . + . ID=gene-C9F09_21310;Name=C9F09_21310;end_range=4869,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21310;partial=true PYKB01001249.1 Protein Homology CDS 3977 4869 . + 0 ID=cds-TGC82444.1;Parent=gene-C9F09_21310;Dbxref=NCBI_GP:TGC82444.1;Name=TGC82444.1;end_range=4869,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=C9F09_21310;partial=true;product=MFS transporter;protein_id=TGC82444.1;transl_table=11 ##sequence-region PYKB01001664.1 1 4851 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001664.1 Genbank region 1 4851 . + . ID=PYKB01001664.1:1..4851;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001664.1 Genbank gene 1 1141 . + . ID=gene-C9F09_28960;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=C9F09_28960;partial=true;start_range=.,1 PYKB01001664.1 Protein Homology CDS 1 1141 . + 1 ID=cds-TGC73218.1;Parent=gene-C9F09_28960;Dbxref=NCBI_GP:TGC73218.1;Name=TGC73218.1;Note=Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458358.1;locus_tag=C9F09_28960;partial=true;product=high-affinity branched-chain amino acid ABC transporter permease LivM;protein_id=TGC73218.1;start_range=.,1;transl_table=11 PYKB01001664.1 Genbank gene 1138 1905 . + . ID=gene-C9F09_28965;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=C9F09_28965 PYKB01001664.1 Protein Homology CDS 1138 1905 . + 0 ID=cds-TGC73219.1;Parent=gene-C9F09_28965;Dbxref=NCBI_GP:TGC73219.1;Name=TGC73219.1;Note=Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=C9F09_28965;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=TGC73219.1;transl_table=11 PYKB01001664.1 Genbank gene 1907 2620 . + . ID=gene-C9F09_28970;Name=C9F09_28970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28970 PYKB01001664.1 Protein Homology CDS 1907 2620 . + 0 ID=cds-TGC73220.1;Parent=gene-C9F09_28970;Dbxref=NCBI_GP:TGC73220.1;Name=TGC73220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458360.1;locus_tag=C9F09_28970;product=ABC transporter ATP-binding protein;protein_id=TGC73220.1;transl_table=11 PYKB01001664.1 Genbank gene 2784 3062 . + . ID=gene-C9F09_28975;Name=C9F09_28975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28975 PYKB01001664.1 Protein Homology CDS 2784 3062 . + 0 ID=cds-TGC73221.1;Parent=gene-C9F09_28975;Dbxref=NCBI_GP:TGC73221.1;Name=TGC73221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000621258.1;locus_tag=C9F09_28975;product=hypothetical protein;protein_id=TGC73221.1;transl_table=11 PYKB01001664.1 Genbank gene 3295 4611 . + . ID=gene-C9F09_28980;Name=C9F09_28980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28980 PYKB01001664.1 Protein Homology CDS 3295 4611 . + 0 ID=cds-TGC73222.1;Parent=gene-C9F09_28980;Dbxref=NCBI_GP:TGC73222.1;Name=TGC73222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458362.1;locus_tag=C9F09_28980;product=sn-glycerol-3-phosphate-binding periplasmic protein UgpB;protein_id=TGC73222.1;transl_table=11 PYKB01001664.1 Genbank gene 4716 4851 . + . ID=gene-C9F09_28985;Name=C9F09_28985;end_range=4851,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28985;partial=true PYKB01001664.1 Protein Homology CDS 4716 4851 . + 0 ID=cds-TGC73223.1;Parent=gene-C9F09_28985;Dbxref=NCBI_GP:TGC73223.1;Name=TGC73223.1;Note=with UgpEC is involved in the uptake of glycerol-3-phosphate;end_range=4851,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=C9F09_28985;partial=true;product=glycerol-3-phosphate transporter permease;protein_id=TGC73223.1;transl_table=11 ##sequence-region PYKB01001296.1 1 4848 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001296.1 Genbank region 1 4848 . + . ID=PYKB01001296.1:1..4848;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001296.1 Genbank gene 1 681 . + . ID=gene-C9F09_22175;Name=C9F09_22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22175;partial=true;start_range=.,1 PYKB01001296.1 Protein Homology CDS 1 681 . + 0 ID=cds-TGC81728.1;Parent=gene-C9F09_22175;Dbxref=NCBI_GP:TGC81728.1;Name=TGC81728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=C9F09_22175;partial=true;product=L-rhamnonate dehydratase;protein_id=TGC81728.1;start_range=.,1;transl_table=11 PYKB01001296.1 Genbank gene 737 2026 . + . ID=gene-C9F09_22180;Name=C9F09_22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22180 PYKB01001296.1 Protein Homology CDS 737 2026 . + 0 ID=cds-TGC81729.1;Parent=gene-C9F09_22180;Dbxref=NCBI_GP:TGC81729.1;Name=TGC81729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456833.1;locus_tag=C9F09_22180;product=MFS transporter;protein_id=TGC81729.1;transl_table=11 PYKB01001296.1 Genbank gene 2052 2855 . + . ID=gene-C9F09_22185;Name=C9F09_22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22185 PYKB01001296.1 Protein Homology CDS 2052 2855 . + 0 ID=cds-TGC81730.1;Parent=gene-C9F09_22185;Dbxref=NCBI_GP:TGC81730.1;Name=TGC81730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461231.1;locus_tag=C9F09_22185;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=TGC81730.1;transl_table=11 PYKB01001296.1 Genbank gene 2861 3037 . + . ID=gene-C9F09_22190;Name=C9F09_22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22190 PYKB01001296.1 Protein Homology CDS 2861 3037 . + 0 ID=cds-TGC81731.1;Parent=gene-C9F09_22190;Dbxref=NCBI_GP:TGC81731.1;Name=TGC81731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=C9F09_22190;product=molybdopterin-binding protein;protein_id=TGC81731.1;transl_table=11 PYKB01001296.1 Genbank gene 3071 3223 . - . ID=gene-C9F09_22195;Name=C9F09_22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22195 PYKB01001296.1 Protein Homology CDS 3071 3223 . - 0 ID=cds-TGC81732.1;Parent=gene-C9F09_22195;Dbxref=NCBI_GP:TGC81732.1;Name=TGC81732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219073.1;locus_tag=C9F09_22195;product=DNA metabolism protein;protein_id=TGC81732.1;transl_table=11 PYKB01001296.1 Genbank gene 3271 4293 . - . ID=gene-C9F09_22200;Name=C9F09_22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22200 PYKB01001296.1 Protein Homology CDS 3271 4293 . - 0 ID=cds-TGC81733.1;Parent=gene-C9F09_22200;Dbxref=NCBI_GP:TGC81733.1;Name=TGC81733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=C9F09_22200;product=type III secretion system effector deubiquitinase SseL;protein_id=TGC81733.1;transl_table=11 PYKB01001296.1 Genbank gene 4214 4417 . - . ID=gene-C9F09_22205;Name=C9F09_22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22205 PYKB01001296.1 Protein Homology CDS 4214 4417 . - 0 ID=cds-TGC81734.1;Parent=gene-C9F09_22205;Dbxref=NCBI_GP:TGC81734.1;Name=TGC81734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001612426.1;locus_tag=C9F09_22205;product=hypothetical protein;protein_id=TGC81734.1;transl_table=11 PYKB01001296.1 Genbank gene 4719 4848 . - . ID=gene-C9F09_22210;Name=glpC;end_range=4848,.;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=C9F09_22210;partial=true PYKB01001296.1 Protein Homology CDS 4719 4848 . - 1 ID=cds-TGC81735.1;Parent=gene-C9F09_22210;Dbxref=NCBI_GP:TGC81735.1;Name=TGC81735.1;Note=anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate;end_range=4848,.;gbkey=CDS;gene=glpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456829.1;locus_tag=C9F09_22210;partial=true;product=anaerobic glycerol-3-phosphate dehydrogenase subunit C;protein_id=TGC81735.1;transl_table=11 ##sequence-region PYKB01001326.1 1 4844 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001326.1 Genbank region 1 4844 . + . ID=PYKB01001326.1:1..4844;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001326.1 Genbank gene 1 638 . + . ID=gene-C9F09_22750;Name=C9F09_22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22750;partial=true;start_range=.,1 PYKB01001326.1 Protein Homology CDS 1 638 . + 2 ID=cds-TGC81013.1;Parent=gene-C9F09_22750;Dbxref=NCBI_GP:TGC81013.1;Name=TGC81013.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=C9F09_22750;partial=true;product=dihydrolipoyl dehydrogenase;protein_id=TGC81013.1;start_range=.,1;transl_table=11 PYKB01001326.1 Genbank gene 927 1211 . + . ID=gene-C9F09_22755;Name=C9F09_22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22755 PYKB01001326.1 Protein Homology CDS 927 1211 . + 0 ID=cds-TGC81014.1;Parent=gene-C9F09_22755;Dbxref=NCBI_GP:TGC81014.1;Name=TGC81014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454769.1;locus_tag=C9F09_22755;product=hypothetical protein;protein_id=TGC81014.1;transl_table=11 PYKB01001326.1 Genbank gene 1249 2040 . - . ID=gene-C9F09_22760;Name=C9F09_22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22760 PYKB01001326.1 Protein Homology CDS 1249 2040 . - 0 ID=cds-TGC81015.1;Parent=gene-C9F09_22760;Dbxref=NCBI_GP:TGC81015.1;Name=TGC81015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454770.1;locus_tag=C9F09_22760;product=DUF2950 domain-containing protein;protein_id=TGC81015.1;transl_table=11 PYKB01001326.1 Genbank pseudogene 2053 3678 . - . ID=gene-C9F09_22765;Name=C9F09_22765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22765;pseudo=true PYKB01001326.1 Protein Homology CDS 2053 3678 . - 0 ID=cds-C9F09_22765;Parent=gene-C9F09_22765;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454771.1;locus_tag=C9F09_22765;product=DUF3300 domain-containing protein;pseudo=true;transl_table=11 PYKB01001326.1 Genbank pseudogene 3957 4086 . + . ID=gene-C9F09_22770;Name=C9F09_22770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22770;pseudo=true PYKB01001326.1 Protein Homology CDS 3957 4086 . + 0 ID=cds-C9F09_22770;Parent=gene-C9F09_22770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480366.1;locus_tag=C9F09_22770;product=aconitate hydratase;pseudo=true;transl_table=11 PYKB01001326.1 Genbank gene 4067 4844 . + . ID=gene-C9F09_22775;Name=C9F09_22775;end_range=4844,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22775;partial=true PYKB01001326.1 Protein Homology CDS 4067 4844 . + 0 ID=cds-TGC81016.1;Parent=gene-C9F09_22775;Dbxref=NCBI_GP:TGC81016.1;Name=TGC81016.1;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;end_range=4844,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454772.1;locus_tag=C9F09_22775;partial=true;product=aconitate hydratase B;protein_id=TGC81016.1;transl_table=11 ##sequence-region PYKB01000601.1 1 4822 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000601.1 Genbank region 1 4822 . + . ID=PYKB01000601.1:1..4822;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000601.1 Genbank pseudogene 495 853 . + . ID=gene-C9F09_08775;Name=C9F09_08775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08775;pseudo=true PYKB01000601.1 Protein Homology CDS 495 853 . + 0 ID=cds-C9F09_08775;Parent=gene-C9F09_08775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576155.1;locus_tag=C9F09_08775;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000601.1 Genbank gene 880 1698 . + . ID=gene-C9F09_08780;Name=C9F09_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08780 PYKB01000601.1 Protein Homology CDS 880 1698 . + 0 ID=cds-TGC95294.1;Parent=gene-C9F09_08780;Dbxref=NCBI_GP:TGC95294.1;Name=TGC95294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176774.1;locus_tag=C9F09_08780;product=hypothetical protein;protein_id=TGC95294.1;transl_table=11 PYKB01000601.1 Genbank pseudogene 1958 2092 . - . ID=gene-C9F09_08785;Name=C9F09_08785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08785;pseudo=true PYKB01000601.1 Protein Homology CDS 1958 2092 . - 0 ID=cds-C9F09_08785;Parent=gene-C9F09_08785;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=C9F09_08785;product=IS3 family transposase;pseudo=true;transl_table=11 PYKB01000601.1 Genbank gene 2159 3175 . + . ID=gene-C9F09_08790;Name=C9F09_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08790 PYKB01000601.1 Protein Homology CDS 2159 3175 . + 0 ID=cds-TGC95292.1;Parent=gene-C9F09_08790;Dbxref=NCBI_GP:TGC95292.1;Name=TGC95292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001028172.1;locus_tag=C9F09_08790;product=IS110 family transposase;protein_id=TGC95292.1;transl_table=11 PYKB01000601.1 Genbank pseudogene 3401 3517 . - . ID=gene-C9F09_08795;Name=C9F09_08795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08795;pseudo=true PYKB01000601.1 Protein Homology CDS 3401 3517 . - 0 ID=cds-C9F09_08795;Parent=gene-C9F09_08795;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=C9F09_08795;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000601.1 Genbank pseudogene 3597 3718 . - . ID=gene-C9F09_08800;Name=C9F09_08800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08800;pseudo=true PYKB01000601.1 Protein Homology CDS 3597 3718 . - 0 ID=cds-C9F09_08800;Parent=gene-C9F09_08800;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535855.1;locus_tag=C9F09_08800;product=integrase;pseudo=true;transl_table=11 PYKB01000601.1 Genbank gene 3947 4034 . - . ID=gene-C9F09_08805;Name=C9F09_08805;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_08805 PYKB01000601.1 tRNAscan-SE tRNA 3947 4034 . - . ID=rna-C9F09_08805;Parent=gene-C9F09_08805;anticodon=(pos:complement(3998..4000));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_08805;product=tRNA-Ser PYKB01000601.1 tRNAscan-SE exon 3947 4034 . - . ID=exon-C9F09_08805-1;Parent=rna-C9F09_08805;anticodon=(pos:complement(3998..4000));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_08805;product=tRNA-Ser PYKB01000601.1 Genbank gene 4107 4271 . - . ID=gene-C9F09_08810;Name=C9F09_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08810 PYKB01000601.1 Protein Homology CDS 4107 4271 . - 0 ID=cds-TGC95293.1;Parent=gene-C9F09_08810;Dbxref=NCBI_GP:TGC95293.1;Name=TGC95293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991980.1;locus_tag=C9F09_08810;product=hypothetical protein;protein_id=TGC95293.1;transl_table=11 PYKB01000601.1 Genbank pseudogene 4270 4722 . + . ID=gene-C9F09_08815;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=pseudogene;locus_tag=C9F09_08815;pseudo=true PYKB01000601.1 Protein Homology CDS 4270 4722 . + 0 ID=cds-C9F09_08815;Parent=gene-C9F09_08815;Note=catalyzes the formation of glycolate and glycerate from glyoxylate and hydroxypyruvate%2C respectively%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=ghrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=C9F09_08815;product=bifunctional glyoxylate/hydroxypyruvate reductase A;pseudo=true;transl_table=11 ##sequence-region PYKB01000336.1 1 4818 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000336.1 Genbank region 1 4818 . + . ID=PYKB01000336.1:1..4818;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000336.1 Genbank gene 1 662 . + . ID=gene-C9F09_03700;Name=C9F09_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03700;partial=true;start_range=.,1 PYKB01000336.1 Protein Homology CDS 1 662 . + 2 ID=cds-TGD00831.1;Parent=gene-C9F09_03700;Dbxref=NCBI_GP:TGD00831.1;Name=TGD00831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=C9F09_03700;partial=true;product=thiol:disulfide interchange protein;protein_id=TGD00831.1;start_range=.,1;transl_table=11 PYKB01000336.1 Genbank gene 677 1354 . + . ID=gene-C9F09_03705;Name=C9F09_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03705 PYKB01000336.1 Protein Homology CDS 677 1354 . + 0 ID=cds-TGD00832.1;Parent=gene-C9F09_03705;Dbxref=NCBI_GP:TGD00832.1;Name=TGD00832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457585.1;locus_tag=C9F09_03705;product=protein-disulfide oxidoreductase DsbI;protein_id=TGD00832.1;transl_table=11 PYKB01000336.1 Genbank gene 1525 2178 . - . ID=gene-C9F09_03710;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=C9F09_03710 PYKB01000336.1 Protein Homology CDS 1525 2178 . - 0 ID=cds-TGD00833.1;Parent=gene-C9F09_03710;Dbxref=NCBI_GP:TGD00833.1;Name=TGD00833.1;gbkey=CDS;gene=ribB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001077009.1;locus_tag=C9F09_03710;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=TGD00833.1;transl_table=11 PYKB01000336.1 cmsearch riboswitch 2284 2482 . - . ID=id-PYKB01000336.1:2284..2482;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00050,COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PYKB01000336.1 Genbank gene 2555 2911 . + . ID=gene-C9F09_03715;Name=C9F09_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03715 PYKB01000336.1 Protein Homology CDS 2555 2911 . + 0 ID=cds-TGD00836.1;Parent=gene-C9F09_03715;Dbxref=NCBI_GP:TGD00836.1;Name=TGD00836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457587.1;locus_tag=C9F09_03715;product=hypothetical protein;protein_id=TGD00836.1;transl_table=11 PYKB01000336.1 Genbank gene 2986 3195 . - . ID=gene-C9F09_03720;Name=C9F09_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03720 PYKB01000336.1 Protein Homology CDS 2986 3195 . - 0 ID=cds-TGD00834.1;Parent=gene-C9F09_03720;Dbxref=NCBI_GP:TGD00834.1;Name=TGD00834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=C9F09_03720;product=cell surface composition regulator GlgS;protein_id=TGD00834.1;transl_table=11 PYKB01000336.1 Genbank gene 3453 4073 . + . ID=gene-C9F09_03725;Name=C9F09_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03725 PYKB01000336.1 Protein Homology CDS 3453 4073 . + 0 ID=cds-TGD00835.1;Parent=gene-C9F09_03725;Dbxref=NCBI_GP:TGD00835.1;Name=TGD00835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=C9F09_03725;product=DUF1449 domain-containing protein;protein_id=TGD00835.1;transl_table=11 PYKB01000336.1 Genbank pseudogene 4092 4772 . + . ID=gene-C9F09_03730;Name=C9F09_03730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03730;pseudo=true PYKB01000336.1 Protein Homology CDS 4092 4772 . + 0 ID=cds-C9F09_03730;Parent=gene-C9F09_03730;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=C9F09_03730;product=flotillin;pseudo=true;transl_table=11 ##sequence-region PYKB01000372.1 1 4812 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000372.1 Genbank region 1 4812 . + . ID=PYKB01000372.1:1..4812;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000372.1 Genbank pseudogene 77 174 . - . ID=gene-C9F09_04230;Name=C9F09_04230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04230;pseudo=true PYKB01000372.1 Protein Homology CDS 77 174 . - 0 ID=cds-C9F09_04230;Parent=gene-C9F09_04230;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463347.1;locus_tag=C9F09_04230;product=integrase;pseudo=true;transl_table=11 PYKB01000372.1 Genbank gene 393 477 . - . ID=gene-C9F09_04235;Name=C9F09_04235;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_04235 PYKB01000372.1 tRNAscan-SE tRNA 393 477 . - . ID=rna-C9F09_04235;Parent=gene-C9F09_04235;anticodon=(pos:complement(441..443));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_04235;product=tRNA-Leu PYKB01000372.1 tRNAscan-SE exon 393 477 . - . ID=exon-C9F09_04235-1;Parent=rna-C9F09_04235;anticodon=(pos:complement(441..443));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_04235;product=tRNA-Leu PYKB01000372.1 Genbank gene 700 1719 . + . ID=gene-C9F09_04240;Name=C9F09_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04240 PYKB01000372.1 Protein Homology CDS 700 1719 . + 0 ID=cds-TGD00080.1;Parent=gene-C9F09_04240;Dbxref=NCBI_GP:TGD00080.1;Name=TGD00080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=C9F09_04240;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=TGD00080.1;transl_table=11 PYKB01000372.1 Genbank gene 1747 2277 . - . ID=gene-C9F09_04245;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=C9F09_04245 PYKB01000372.1 Protein Homology CDS 1747 2277 . - 0 ID=cds-TGD00081.1;Parent=gene-C9F09_04245;Dbxref=NCBI_GP:TGD00081.1;Name=TGD00081.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=C9F09_04245;product=gluconate kinase;protein_id=TGD00081.1;transl_table=11 PYKB01000372.1 Genbank gene 2494 3525 . + . ID=gene-C9F09_04250;Name=C9F09_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04250 PYKB01000372.1 Protein Homology CDS 2494 3525 . + 0 ID=cds-TGD00082.1;Parent=gene-C9F09_04250;Dbxref=NCBI_GP:TGD00082.1;Name=TGD00082.1;Note=NAD-binding;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=C9F09_04250;product=L-idonate 5-dehydrogenase;protein_id=TGD00082.1;transl_table=11 PYKB01000372.1 Genbank gene 3550 4314 . + . ID=gene-C9F09_04255;Name=C9F09_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04255 PYKB01000372.1 Protein Homology CDS 3550 4314 . + 0 ID=cds-TGD00083.1;Parent=gene-C9F09_04255;Dbxref=NCBI_GP:TGD00083.1;Name=TGD00083.1;Note=Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=C9F09_04255;product=gluconate 5-dehydrogenase;protein_id=TGD00083.1;transl_table=11 PYKB01000372.1 Genbank gene 4376 4812 . + . ID=gene-C9F09_04260;Name=C9F09_04260;end_range=4812,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04260;partial=true PYKB01000372.1 Protein Homology CDS 4376 4812 . + 0 ID=cds-TGD00084.1;Parent=gene-C9F09_04260;Dbxref=NCBI_GP:TGD00084.1;Name=TGD00084.1;end_range=4812,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=C9F09_04260;partial=true;product=gluconate permease;protein_id=TGD00084.1;transl_table=11 ##sequence-region PYKB01000416.1 1 4812 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000416.1 Genbank region 1 4812 . + . ID=PYKB01000416.1:1..4812;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000416.1 Genbank gene 1 869 . + . ID=gene-C9F09_04755;Name=C9F09_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04755;partial=true;start_range=.,1 PYKB01000416.1 Protein Homology CDS 1 869 . + 2 ID=cds-TGC99329.1;Parent=gene-C9F09_04755;Dbxref=NCBI_GP:TGC99329.1;Name=TGC99329.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020244583.1;locus_tag=C9F09_04755;partial=true;product=phosphogluconate dehydratase;protein_id=TGC99329.1;start_range=.,1;transl_table=11 PYKB01000416.1 Genbank gene 907 1548 . + . ID=gene-C9F09_04760;Name=C9F09_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04760 PYKB01000416.1 Protein Homology CDS 907 1548 . + 0 ID=cds-TGC99330.1;Parent=gene-C9F09_04760;Dbxref=NCBI_GP:TGC99330.1;Name=TGC99330.1;Note=catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=C9F09_04760;product=keto-deoxy-phosphogluconate aldolase;protein_id=TGC99330.1;transl_table=11 PYKB01000416.1 Genbank gene 1648 2826 . - . ID=gene-C9F09_04765;Name=C9F09_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04765 PYKB01000416.1 Protein Homology CDS 1648 2826 . - 0 ID=cds-TGC99331.1;Parent=gene-C9F09_04765;Dbxref=NCBI_GP:TGC99331.1;Name=TGC99331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=C9F09_04765;product=phosphoribosylglycinamide formyltransferase 2;protein_id=TGC99331.1;transl_table=11 PYKB01000416.1 Genbank gene 2957 3247 . + . ID=gene-C9F09_04770;Name=C9F09_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04770 PYKB01000416.1 Protein Homology CDS 2957 3247 . + 0 ID=cds-TGC99332.1;Parent=gene-C9F09_04770;Dbxref=NCBI_GP:TGC99332.1;Name=TGC99332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=C9F09_04770;product=damage-inducible protein YebG;protein_id=TGC99332.1;transl_table=11 PYKB01000416.1 Genbank gene 3315 3668 . + . ID=gene-C9F09_04775;Name=C9F09_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04775 PYKB01000416.1 Protein Homology CDS 3315 3668 . + 0 ID=cds-TGC99333.1;Parent=gene-C9F09_04775;Dbxref=NCBI_GP:TGC99333.1;Name=TGC99333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456449.1;locus_tag=C9F09_04775;product=hypothetical protein;protein_id=TGC99333.1;transl_table=11 PYKB01000416.1 Genbank gene 3762 4421 . + . ID=gene-C9F09_04780;Name=C9F09_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04780 PYKB01000416.1 Protein Homology CDS 3762 4421 . + 0 ID=cds-TGC99334.1;Parent=gene-C9F09_04780;Dbxref=NCBI_GP:TGC99334.1;Name=TGC99334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=C9F09_04780;product=DUF533 domain-containing protein;protein_id=TGC99334.1;transl_table=11 PYKB01000416.1 Genbank gene 4634 4812 . + . ID=gene-C9F09_04785;Name=C9F09_04785;end_range=4812,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04785;partial=true PYKB01000416.1 Protein Homology CDS 4634 4812 . + 0 ID=cds-TGC99335.1;Parent=gene-C9F09_04785;Dbxref=NCBI_GP:TGC99335.1;Name=TGC99335.1;end_range=4812,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=C9F09_04785;partial=true;product=oligopeptidase B;protein_id=TGC99335.1;transl_table=11 ##sequence-region PYKB01000427.1 1 4810 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000427.1 Genbank region 1 4810 . + . ID=PYKB01000427.1:1..4810;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000427.1 Genbank pseudogene 75 527 . - . ID=gene-C9F09_05025;Name=C9F09_05025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05025;pseudo=true PYKB01000427.1 Protein Homology CDS 75 527 . - 0 ID=cds-C9F09_05025;Parent=gene-C9F09_05025;Note=catalyzes branch migration in Holliday junction intermediates%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122596.1;locus_tag=C9F09_05025;product=ATP-dependent DNA helicase RecG;pseudo=true;transl_table=11 PYKB01000427.1 Genbank gene 533 1222 . - . ID=gene-C9F09_05030;Name=C9F09_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05030 PYKB01000427.1 Protein Homology CDS 533 1222 . - 0 ID=cds-TGC99091.1;Parent=gene-C9F09_05030;Dbxref=NCBI_GP:TGC99091.1;Name=TGC99091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=C9F09_05030;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=TGC99091.1;transl_table=11 PYKB01000427.1 Genbank gene 1227 3338 . - . ID=gene-C9F09_05035;Name=C9F09_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05035 PYKB01000427.1 Protein Homology CDS 1227 3338 . - 0 ID=cds-TGC99092.1;Parent=gene-C9F09_05035;Dbxref=NCBI_GP:TGC99092.1;Name=TGC99092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455762.1;locus_tag=C9F09_05035;product=guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase;protein_id=TGC99092.1;transl_table=11 PYKB01000427.1 Genbank gene 3357 3632 . - . ID=gene-C9F09_05040;Name=C9F09_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05040 PYKB01000427.1 Protein Homology CDS 3357 3632 . - 0 ID=cds-TGC99093.1;Parent=gene-C9F09_05040;Dbxref=NCBI_GP:TGC99093.1;Name=TGC99093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=C9F09_05040;product=DNA-directed RNA polymerase subunit omega;protein_id=TGC99093.1;transl_table=11 PYKB01000427.1 Genbank gene 3687 4310 . - . ID=gene-C9F09_05045;Name=C9F09_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05045 PYKB01000427.1 Protein Homology CDS 3687 4310 . - 0 ID=cds-TGC99094.1;Parent=gene-C9F09_05045;Dbxref=NCBI_GP:TGC99094.1;Name=TGC99094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=C9F09_05045;product=guanylate kinase;protein_id=TGC99094.1;transl_table=11 PYKB01000427.1 Genbank gene 4567 4810 . + . ID=gene-C9F09_05050;Name=ligB;end_range=4810,.;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;gene_synonym=yicF;locus_tag=C9F09_05050;partial=true PYKB01000427.1 Protein Homology CDS 4567 4810 . + 0 ID=cds-TGC99095.1;Parent=gene-C9F09_05050;Dbxref=NCBI_GP:TGC99095.1;Name=TGC99095.1;Note=this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+;end_range=4810,.;gbkey=CDS;gene=ligB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=C9F09_05050;partial=true;product=ATP-dependent DNA ligase;protein_id=TGC99095.1;transl_table=11 ##sequence-region PYKB01000680.1 1 12629 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000680.1 Genbank region 1 12629 . + . ID=PYKB01000680.1:1..12629;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000680.1 Genbank pseudogene 1 114 . + . ID=gene-C9F09_10155;Name=C9F09_10155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10155;pseudo=true PYKB01000680.1 Protein Homology CDS 1 114 . + 0 ID=cds-C9F09_10155;Parent=gene-C9F09_10155;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016158396.1;locus_tag=C9F09_10155;product=tryptophan synthase subunit beta;pseudo=true;transl_table=11 PYKB01000680.1 Genbank gene 114 920 . + . ID=gene-C9F09_10160;Name=C9F09_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10160 PYKB01000680.1 Protein Homology CDS 114 920 . + 0 ID=cds-TGC93955.1;Parent=gene-C9F09_10160;Dbxref=NCBI_GP:TGC93955.1;Name=TGC93955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455771.1;locus_tag=C9F09_10160;product=tryptophan synthase subunit alpha;protein_id=TGC93955.1;transl_table=11 PYKB01000680.1 Genbank gene 1400 1582 . + . ID=gene-C9F09_10165;Name=C9F09_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10165 PYKB01000680.1 Protein Homology CDS 1400 1582 . + 0 ID=cds-TGC93956.1;Parent=gene-C9F09_10165;Dbxref=NCBI_GP:TGC93956.1;Name=TGC93956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455770.1;locus_tag=C9F09_10165;product=stress-induced acidophilic repeat motif-containing protein;protein_id=TGC93956.1;transl_table=11 PYKB01000680.1 Genbank gene 1672 2175 . + . ID=gene-C9F09_10170;Name=C9F09_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10170 PYKB01000680.1 Protein Homology CDS 1672 2175 . + 0 ID=cds-TGC93957.1;Parent=gene-C9F09_10170;Dbxref=NCBI_GP:TGC93957.1;Name=TGC93957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455769.1;locus_tag=C9F09_10170;product=ferritin-like domain-containing protein;protein_id=TGC93957.1;transl_table=11 PYKB01000680.1 Genbank gene 2249 2755 . + . ID=gene-C9F09_10175;Name=C9F09_10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10175 PYKB01000680.1 Protein Homology CDS 2249 2755 . + 0 ID=cds-TGC93958.1;Parent=gene-C9F09_10175;Dbxref=NCBI_GP:TGC93958.1;Name=TGC93958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455768.1;locus_tag=C9F09_10175;product=ferritin-like domain-containing protein;protein_id=TGC93958.1;transl_table=11 PYKB01000680.1 Genbank gene 2775 3653 . + . ID=gene-C9F09_10180;Name=C9F09_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10180 PYKB01000680.1 Protein Homology CDS 2775 3653 . + 0 ID=cds-TGC93959.1;Parent=gene-C9F09_10180;Dbxref=NCBI_GP:TGC93959.1;Name=TGC93959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455767.1;locus_tag=C9F09_10180;product=Mn-containing catalase;protein_id=TGC93959.1;transl_table=11 PYKB01000680.1 Genbank gene 3735 4373 . - . ID=gene-C9F09_10185;Name=C9F09_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10185 PYKB01000680.1 Protein Homology CDS 3735 4373 . - 0 ID=cds-TGC93960.1;Parent=gene-C9F09_10185;Dbxref=NCBI_GP:TGC93960.1;Name=TGC93960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=C9F09_10185;product=outer membrane protein OmpW;protein_id=TGC93960.1;transl_table=11 PYKB01000680.1 Genbank gene 4710 5114 . + . ID=gene-C9F09_10190;Name=C9F09_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10190 PYKB01000680.1 Protein Homology CDS 4710 5114 . + 0 ID=cds-TGC93961.1;Parent=gene-C9F09_10190;Dbxref=NCBI_GP:TGC93961.1;Name=TGC93961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455765.1;locus_tag=C9F09_10190;product=YkgJ family cysteine cluster protein;protein_id=TGC93961.1;transl_table=11 PYKB01000680.1 Genbank gene 5140 5883 . + . ID=gene-C9F09_10195;Name=C9F09_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10195 PYKB01000680.1 Protein Homology CDS 5140 5883 . + 0 ID=cds-TGC93962.1;Parent=gene-C9F09_10195;Dbxref=NCBI_GP:TGC93962.1;Name=TGC93962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=C9F09_10195;product=UPF0259 family protein;protein_id=TGC93962.1;transl_table=11 PYKB01000680.1 Genbank gene 5940 6479 . + . ID=gene-C9F09_10200;Name=C9F09_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10200 PYKB01000680.1 Protein Homology CDS 5940 6479 . + 0 ID=cds-TGC93963.1;Parent=gene-C9F09_10200;Dbxref=NCBI_GP:TGC93963.1;Name=TGC93963.1;Note=Involved in cell division%3B probably involved in intracellular septation;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455763.1;locus_tag=C9F09_10200;product=intracellular septation protein A;protein_id=TGC93963.1;transl_table=11 PYKB01000680.1 Genbank gene 6640 7041 . + . ID=gene-C9F09_10205;Name=C9F09_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10205 PYKB01000680.1 Protein Homology CDS 6640 7041 . + 0 ID=cds-TGC93964.1;Parent=gene-C9F09_10205;Dbxref=NCBI_GP:TGC93964.1;Name=TGC93964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455762.1;locus_tag=C9F09_10205;product=acyl-CoA thioesterase;protein_id=TGC93964.1;transl_table=11 PYKB01000680.1 Genbank gene 7101 7823 . - . ID=gene-C9F09_10210;Name=C9F09_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10210 PYKB01000680.1 Protein Homology CDS 7101 7823 . - 0 ID=cds-TGC93970.1;Parent=gene-C9F09_10210;Dbxref=NCBI_GP:TGC93970.1;Name=TGC93970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=C9F09_10210;product=TonB system transport protein TonB;protein_id=TGC93970.1;transl_table=11 PYKB01000680.1 Genbank gene 8047 8343 . + . ID=gene-C9F09_10215;Name=C9F09_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10215 PYKB01000680.1 Protein Homology CDS 8047 8343 . + 0 ID=cds-TGC93965.1;Parent=gene-C9F09_10215;Dbxref=NCBI_GP:TGC93965.1;Name=TGC93965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455760.1;locus_tag=C9F09_10215;product=hypothetical protein;protein_id=TGC93965.1;transl_table=11 PYKB01000680.1 Genbank gene 8703 10163 . + . ID=gene-C9F09_10220;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=C9F09_10220 PYKB01000680.1 Protein Homology CDS 8703 10163 . + 0 ID=cds-TGC93966.1;Parent=gene-C9F09_10220;Dbxref=NCBI_GP:TGC93966.1;Name=TGC93966.1;gbkey=CDS;gene=cls;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=C9F09_10220;product=cardiolipin synthase;protein_id=TGC93966.1;transl_table=11 PYKB01000680.1 Genbank gene 10197 10526 . + . ID=gene-C9F09_10225;Name=C9F09_10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10225 PYKB01000680.1 Protein Homology CDS 10197 10526 . + 0 ID=cds-TGC93967.1;Parent=gene-C9F09_10225;Dbxref=NCBI_GP:TGC93967.1;Name=TGC93967.1;Note=highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405907.1;locus_tag=C9F09_10225;product=dsDNA-mimic protein;protein_id=TGC93967.1;transl_table=11 PYKB01000680.1 Genbank gene 10574 11410 . - . ID=gene-C9F09_10230;Name=C9F09_10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10230 PYKB01000680.1 Protein Homology CDS 10574 11410 . - 0 ID=cds-TGC93968.1;Parent=gene-C9F09_10230;Dbxref=NCBI_GP:TGC93968.1;Name=TGC93968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=C9F09_10230;product=transporter;protein_id=TGC93968.1;transl_table=11 PYKB01000680.1 Genbank gene 11458 12462 . - . ID=gene-C9F09_10235;Name=C9F09_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10235 PYKB01000680.1 Protein Homology CDS 11458 12462 . - 0 ID=cds-TGC93969.1;Parent=gene-C9F09_10235;Dbxref=NCBI_GP:TGC93969.1;Name=TGC93969.1;Note=with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=C9F09_10235;product=oligopeptide ABC transporter ATP-binding protein OppF;protein_id=TGC93969.1;transl_table=11 ##sequence-region PYKB01001307.1 1 23140 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001307.1 Genbank region 1 23140 . + . ID=PYKB01001307.1:1..23140;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001307.1 Genbank gene 1 288 . - . ID=gene-C9F09_22365;Name=C9F09_22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22365;partial=true;start_range=.,1 PYKB01001307.1 Protein Homology CDS 1 288 . - 0 ID=cds-TGC81450.1;Parent=gene-C9F09_22365;Dbxref=NCBI_GP:TGC81450.1;Name=TGC81450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957977.1;locus_tag=C9F09_22365;partial=true;product=fimbrial protein;protein_id=TGC81450.1;start_range=.,1;transl_table=11 PYKB01001307.1 Genbank gene 304 912 . - . ID=gene-C9F09_22370;Name=C9F09_22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22370 PYKB01001307.1 Protein Homology CDS 304 912 . - 0 ID=cds-TGC81451.1;Parent=gene-C9F09_22370;Dbxref=NCBI_GP:TGC81451.1;Name=TGC81451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001080417.1;locus_tag=C9F09_22370;product=hypothetical protein;protein_id=TGC81451.1;transl_table=11 PYKB01001307.1 Genbank gene 927 1511 . - . ID=gene-C9F09_22375;Name=C9F09_22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22375 PYKB01001307.1 Protein Homology CDS 927 1511 . - 0 ID=cds-TGC81452.1;Parent=gene-C9F09_22375;Dbxref=NCBI_GP:TGC81452.1;Name=TGC81452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006892398.1;locus_tag=C9F09_22375;product=fimbrial protein;protein_id=TGC81452.1;transl_table=11 PYKB01001307.1 Genbank gene 1525 4125 . - . ID=gene-C9F09_22380;Name=C9F09_22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22380 PYKB01001307.1 Protein Homology CDS 1525 4125 . - 0 ID=cds-TGC81453.1;Parent=gene-C9F09_22380;Dbxref=NCBI_GP:TGC81453.1;Name=TGC81453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747525.1;locus_tag=C9F09_22380;product=outer membrane usher protein;protein_id=TGC81453.1;transl_table=11 PYKB01001307.1 Genbank gene 4146 4889 . - . ID=gene-C9F09_22385;Name=C9F09_22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22385 PYKB01001307.1 Protein Homology CDS 4146 4889 . - 0 ID=cds-TGC81454.1;Parent=gene-C9F09_22385;Dbxref=NCBI_GP:TGC81454.1;Name=TGC81454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000882257.1;locus_tag=C9F09_22385;product=fimbrial chaperone;protein_id=TGC81454.1;transl_table=11 PYKB01001307.1 Genbank gene 5033 5662 . - . ID=gene-C9F09_22390;Name=C9F09_22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22390 PYKB01001307.1 Protein Homology CDS 5033 5662 . - 0 ID=cds-TGC81455.1;Parent=gene-C9F09_22390;Dbxref=NCBI_GP:TGC81455.1;Name=TGC81455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006892400.1;locus_tag=C9F09_22390;product=pilus assembly protein;protein_id=TGC81455.1;transl_table=11 PYKB01001307.1 Genbank pseudogene 6052 6361 . - . ID=gene-C9F09_22395;Name=C9F09_22395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22395;pseudo=true PYKB01001307.1 Protein Homology CDS 6052 6361 . - 0 ID=cds-C9F09_22395;Parent=gene-C9F09_22395;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=C9F09_22395;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001307.1 Genbank gene 7814 8431 . + . ID=gene-C9F09_22400;Name=C9F09_22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22400 PYKB01001307.1 Protein Homology CDS 7814 8431 . + 0 ID=cds-TGC81456.1;Parent=gene-C9F09_22400;Dbxref=NCBI_GP:TGC81456.1;Name=TGC81456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458174.1;locus_tag=C9F09_22400;product=helix-turn-helix transcriptional regulator;protein_id=TGC81456.1;transl_table=11 PYKB01001307.1 Genbank gene 8506 11304 . + . ID=gene-C9F09_22405;Name=C9F09_22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22405 PYKB01001307.1 Protein Homology CDS 8506 11304 . + 0 ID=cds-TGC81457.1;Parent=gene-C9F09_22405;Dbxref=NCBI_GP:TGC81457.1;Name=TGC81457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=C9F09_22405;product=intestinal colonization autotransporter adhesin MisL;protein_id=TGC81457.1;transl_table=11 PYKB01001307.1 Genbank gene 11399 11863 . - . ID=gene-C9F09_22410;Name=C9F09_22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22410 PYKB01001307.1 Protein Homology CDS 11399 11863 . - 0 ID=cds-TGC81467.1;Parent=gene-C9F09_22410;Dbxref=NCBI_GP:TGC81467.1;Name=TGC81467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458173.1;locus_tag=C9F09_22410;product=hypothetical protein;protein_id=TGC81467.1;transl_table=11 PYKB01001307.1 Genbank gene 11874 12731 . - . ID=gene-C9F09_22415;Name=C9F09_22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22415 PYKB01001307.1 Protein Homology CDS 11874 12731 . - 0 ID=cds-TGC81458.1;Parent=gene-C9F09_22415;Dbxref=NCBI_GP:TGC81458.1;Name=TGC81458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=C9F09_22415;product=transcriptional regulator;protein_id=TGC81458.1;transl_table=11 PYKB01001307.1 Genbank gene 12784 12897 . - . ID=gene-C9F09_22420;Name=C9F09_22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22420 PYKB01001307.1 Protein Homology CDS 12784 12897 . - 0 ID=cds-TGC81459.1;Parent=gene-C9F09_22420;Dbxref=NCBI_GP:TGC81459.1;Name=TGC81459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453069.1;locus_tag=C9F09_22420;product=hypothetical protein;protein_id=TGC81459.1;transl_table=11 PYKB01001307.1 Genbank gene 13515 14195 . + . ID=gene-C9F09_22425;Name=C9F09_22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22425 PYKB01001307.1 Protein Homology CDS 13515 14195 . + 0 ID=cds-TGC81460.1;Parent=gene-C9F09_22425;Dbxref=NCBI_GP:TGC81460.1;Name=TGC81460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458172.1;locus_tag=C9F09_22425;product=amidohydrolase;protein_id=TGC81460.1;transl_table=11 PYKB01001307.1 Genbank gene 14363 14842 . - . ID=gene-C9F09_22430;Name=C9F09_22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22430 PYKB01001307.1 Protein Homology CDS 14363 14842 . - 0 ID=cds-TGC81461.1;Parent=gene-C9F09_22430;Dbxref=NCBI_GP:TGC81461.1;Name=TGC81461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=C9F09_22430;product=hypothetical protein;protein_id=TGC81461.1;transl_table=11 PYKB01001307.1 Genbank gene 15043 15135 . - . ID=gene-C9F09_22435;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=C9F09_22435 PYKB01001307.1 Protein Homology CDS 15043 15135 . - 0 ID=cds-TGC81462.1;Parent=gene-C9F09_22435;Dbxref=NCBI_GP:TGC81462.1;Name=TGC81462.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=C9F09_22435;product=protein MgtR;protein_id=TGC81462.1;transl_table=11 PYKB01001307.1 Genbank gene 15157 17883 . - . ID=gene-C9F09_22440;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=C9F09_22440 PYKB01001307.1 Protein Homology CDS 15157 17883 . - 0 ID=cds-TGC81463.1;Parent=gene-C9F09_22440;Dbxref=NCBI_GP:TGC81463.1;Name=TGC81463.1;gbkey=CDS;gene=mgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=C9F09_22440;product=magnesium-translocating P-type ATPase;protein_id=TGC81463.1;transl_table=11 PYKB01001307.1 Genbank gene 18102 18797 . - . ID=gene-C9F09_22445;Name=C9F09_22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22445 PYKB01001307.1 Protein Homology CDS 18102 18797 . - 0 ID=cds-TGC81464.1;Parent=gene-C9F09_22445;Dbxref=NCBI_GP:TGC81464.1;Name=TGC81464.1;Note=may activate Na/K-ATPase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458170.1;locus_tag=C9F09_22445;product=protein MgtC;protein_id=TGC81464.1;transl_table=11 PYKB01001307.1 Genbank gene 19303 20205 . + . ID=gene-C9F09_22450;Name=C9F09_22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22450 PYKB01001307.1 Protein Homology CDS 19303 20205 . + 0 ID=cds-TGC81468.1;Parent=gene-C9F09_22450;Dbxref=NCBI_GP:TGC81468.1;Name=TGC81468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458169.1;locus_tag=C9F09_22450;product=EamA family transporter;protein_id=TGC81468.1;transl_table=11 PYKB01001307.1 Genbank gene 20248 21177 . - . ID=gene-C9F09_22455;Name=C9F09_22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22455 PYKB01001307.1 Protein Homology CDS 20248 21177 . - 0 ID=cds-TGC81465.1;Parent=gene-C9F09_22455;Dbxref=NCBI_GP:TGC81465.1;Name=TGC81465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147726.1;locus_tag=C9F09_22455;product=ISNCY family transposase;protein_id=TGC81465.1;transl_table=11 PYKB01001307.1 Genbank gene 21413 22156 . - . ID=gene-C9F09_22460;Name=C9F09_22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22460 PYKB01001307.1 Protein Homology CDS 21413 22156 . - 0 ID=cds-TGC81466.1;Parent=gene-C9F09_22460;Dbxref=NCBI_GP:TGC81466.1;Name=TGC81466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=C9F09_22460;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=TGC81466.1;transl_table=11 PYKB01001307.1 Genbank gene 22143 23140 . - . ID=gene-C9F09_22465;Name=dgaE;end_range=23140,.;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=C9F09_22465;partial=true PYKB01001307.1 Protein Homology CDS 22143 23140 . - 2 ID=cds-TGC81469.1;Parent=gene-C9F09_22465;Dbxref=NCBI_GP:TGC81469.1;Name=TGC81469.1;end_range=23140,.;gbkey=CDS;gene=dgaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458166.1;locus_tag=C9F09_22465;partial=true;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=TGC81469.1;transl_table=11 ##sequence-region PYKB01000081.1 1 4803 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000081.1 Genbank region 1 4803 . + . ID=PYKB01000081.1:1..4803;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000081.1 Genbank gene 1 252 . - . ID=gene-C9F09_00955;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=C9F09_00955;partial=true;start_range=.,1 PYKB01000081.1 Protein Homology CDS 1 252 . - 0 ID=cds-TGD05830.1;Parent=gene-C9F09_00955;Dbxref=NCBI_GP:TGD05830.1;Name=TGD05830.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457830.1;locus_tag=C9F09_00955;partial=true;product=transcription termination factor Rho;protein_id=TGD05830.1;start_range=.,1;transl_table=11 PYKB01000081.1 Genbank gene 340 474 . - . ID=gene-C9F09_00960;Name=C9F09_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00960 PYKB01000081.1 Protein Homology CDS 340 474 . - 0 ID=cds-TGD05835.1;Parent=gene-C9F09_00960;Dbxref=NCBI_GP:TGD05835.1;Name=TGD05835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=C9F09_00960;product=rho operon leader peptide;protein_id=TGD05835.1;transl_table=11 PYKB01000081.1 Genbank gene 671 1000 . - . ID=gene-C9F09_00965;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=C9F09_00965 PYKB01000081.1 Protein Homology CDS 671 1000 . - 0 ID=cds-TGD05831.1;Parent=gene-C9F09_00965;Dbxref=NCBI_GP:TGD05831.1;Name=TGD05831.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457831.1;locus_tag=C9F09_00965;product=thiol reductase thioredoxin;protein_id=TGD05831.1;transl_table=11 PYKB01000081.1 Genbank gene 1144 2409 . + . ID=gene-C9F09_00970;Name=C9F09_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00970 PYKB01000081.1 Protein Homology CDS 1144 2409 . + 0 ID=cds-TGD05832.1;Parent=gene-C9F09_00970;Dbxref=NCBI_GP:TGD05832.1;Name=TGD05832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457832.1;locus_tag=C9F09_00970;product=ATP-dependent RNA helicase RhlB;protein_id=TGD05832.1;transl_table=11 PYKB01000081.1 Genbank gene 2418 2522 . + . ID=gene-C9F09_00975;Name=C9F09_00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00975 PYKB01000081.1 Protein Homology CDS 2418 2522 . + 0 ID=cds-TGD05833.1;Parent=gene-C9F09_00975;Dbxref=NCBI_GP:TGD05833.1;Name=TGD05833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001309089.1;locus_tag=C9F09_00975;product=addiction module toxin RelE;protein_id=TGD05833.1;transl_table=11 PYKB01000081.1 Genbank gene 2528 4009 . + . ID=gene-C9F09_00980;Name=C9F09_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00980 PYKB01000081.1 Protein Homology CDS 2528 4009 . + 0 ID=cds-TGD05834.1;Parent=gene-C9F09_00980;Dbxref=NCBI_GP:TGD05834.1;Name=TGD05834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457833.1;locus_tag=C9F09_00980;product=guanosine-5'-triphosphate%2C3'-diphosphate pyrophosphatase;protein_id=TGD05834.1;transl_table=11 PYKB01000081.1 Genbank gene 4049 4803 . - . ID=gene-C9F09_00985;Name=C9F09_00985;end_range=4803,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00985;partial=true PYKB01000081.1 Protein Homology CDS 4049 4803 . - 2 ID=cds-TGD05836.1;Parent=gene-C9F09_00985;Dbxref=NCBI_GP:TGD05836.1;Name=TGD05836.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;end_range=4803,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=C9F09_00985;partial=true;product=ATP-dependent DNA helicase Rep;protein_id=TGD05836.1;transl_table=11 ##sequence-region PYKB01000288.1 1 4789 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000288.1 Genbank region 1 4789 . + . ID=PYKB01000288.1:1..4789;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000288.1 Genbank gene 1 144 . + . ID=gene-C9F09_03295;Name=C9F09_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03295;partial=true;start_range=.,1 PYKB01000288.1 Protein Homology CDS 1 144 . + 0 ID=cds-TGD01613.1;Parent=gene-C9F09_03295;Dbxref=NCBI_GP:TGD01613.1;Name=TGD01613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456304.1;locus_tag=C9F09_03295;partial=true;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=TGD01613.1;start_range=.,1;transl_table=11 PYKB01000288.1 Genbank gene 207 1919 . - . ID=gene-C9F09_03300;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=C9F09_03300 PYKB01000288.1 Protein Homology CDS 207 1919 . - 0 ID=cds-TGD01614.1;Parent=gene-C9F09_03300;Dbxref=NCBI_GP:TGD01614.1;Name=TGD01614.1;Note=periplasmic%3B catalyzes the hydrolysis of trehalose to glucose which can then be imported into the cell;gbkey=CDS;gene=treA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=C9F09_03300;product=alpha%2Calpha-trehalase;protein_id=TGD01614.1;transl_table=11 PYKB01000288.1 Genbank gene 2133 3407 . - . ID=gene-C9F09_03305;Name=C9F09_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03305 PYKB01000288.1 Protein Homology CDS 2133 3407 . - 0 ID=cds-TGD01615.1;Parent=gene-C9F09_03305;Dbxref=NCBI_GP:TGD01615.1;Name=TGD01615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004594268.1;locus_tag=C9F09_03305;product=glutamate dehydrogenase;protein_id=TGD01615.1;transl_table=11 PYKB01000288.1 Genbank gene 3802 3891 . - . ID=gene-C9F09_03310;Name=C9F09_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03310 PYKB01000288.1 Protein Homology CDS 3802 3891 . - 0 ID=cds-TGD01616.1;Parent=gene-C9F09_03310;Dbxref=NCBI_GP:TGD01616.1;Name=TGD01616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=C9F09_03310;product=cytochrome bd-II oxidase subunit CbdX;protein_id=TGD01616.1;transl_table=11 PYKB01000288.1 Genbank gene 3904 4789 . - . ID=gene-C9F09_03315;Name=cydB;end_range=4789,.;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=C9F09_03315;partial=true PYKB01000288.1 Protein Homology CDS 3904 4789 . - 1 ID=cds-TGD01617.1;Parent=gene-C9F09_03315;Dbxref=NCBI_GP:TGD01617.1;Name=TGD01617.1;end_range=4789,.;gbkey=CDS;gene=cydB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456302.1;locus_tag=C9F09_03315;partial=true;product=cytochrome d ubiquinol oxidase subunit II;protein_id=TGD01617.1;transl_table=11 ##sequence-region PYKB01000161.1 1 4763 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000161.1 Genbank region 1 4763 . + . ID=PYKB01000161.1:1..4763;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000161.1 Genbank gene 1 537 . + . ID=gene-C9F09_01790;Name=C9F09_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01790;partial=true;start_range=.,1 PYKB01000161.1 Protein Homology CDS 1 537 . + 0 ID=cds-TGD04265.1;Parent=gene-C9F09_01790;Dbxref=NCBI_GP:TGD04265.1;Name=TGD04265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=C9F09_01790;partial=true;product=lytic transglycosylase F;protein_id=TGD04265.1;start_range=.,1;transl_table=11 PYKB01000161.1 Genbank gene 588 1139 . - . ID=gene-C9F09_01795;Name=C9F09_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01795 PYKB01000161.1 Protein Homology CDS 588 1139 . - 0 ID=cds-TGD04266.1;Parent=gene-C9F09_01795;Dbxref=NCBI_GP:TGD04266.1;Name=TGD04266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457097.1;locus_tag=C9F09_01795;product=tRNA adenosine(34) deaminase TadA;protein_id=TGD04266.1;transl_table=11 PYKB01000161.1 Genbank gene 1164 1799 . - . ID=gene-C9F09_01800;Name=C9F09_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01800 PYKB01000161.1 Protein Homology CDS 1164 1799 . - 0 ID=cds-TGD04267.1;Parent=gene-C9F09_01800;Dbxref=NCBI_GP:TGD04267.1;Name=TGD04267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=C9F09_01800;product=phosphatidylglycerophosphatase C;protein_id=TGD04267.1;transl_table=11 PYKB01000161.1 Genbank gene 1803 3164 . - . ID=gene-C9F09_01805;Name=C9F09_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01805 PYKB01000161.1 Protein Homology CDS 1803 3164 . - 0 ID=cds-TGD04268.1;Parent=gene-C9F09_01805;Dbxref=NCBI_GP:TGD04268.1;Name=TGD04268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=C9F09_01805;product=PTS sugar transporter subunit IIC;protein_id=TGD04268.1;transl_table=11 PYKB01000161.1 Genbank gene 3175 4068 . - . ID=gene-C9F09_01810;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=C9F09_01810 PYKB01000161.1 Protein Homology CDS 3175 4068 . - 0 ID=cds-TGD04269.1;Parent=gene-C9F09_01810;Dbxref=NCBI_GP:TGD04269.1;Name=TGD04269.1;gbkey=CDS;gene=murQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=C9F09_01810;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=TGD04269.1;transl_table=11 PYKB01000161.1 Genbank gene 4184 4763 . + . ID=gene-C9F09_01815;Name=C9F09_01815;end_range=4763,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01815;partial=true PYKB01000161.1 Protein Homology CDS 4184 4763 . + 0 ID=cds-TGD04270.1;Parent=gene-C9F09_01815;Dbxref=NCBI_GP:TGD04270.1;Name=TGD04270.1;end_range=4763,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=C9F09_01815;partial=true;product=MurR/RpiR family transcriptional regulator;protein_id=TGD04270.1;transl_table=11 ##sequence-region PYKB01000506.1 1 4762 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000506.1 Genbank region 1 4762 . + . ID=PYKB01000506.1:1..4762;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000506.1 Genbank gene 1 399 . + . ID=gene-C9F09_06495;Name=C9F09_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06495;partial=true;start_range=.,1 PYKB01000506.1 Protein Homology CDS 1 399 . + 0 ID=cds-TGC97458.1;Parent=gene-C9F09_06495;Dbxref=NCBI_GP:TGC97458.1;Name=TGC97458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=C9F09_06495;partial=true;product=hypothetical protein;protein_id=TGC97458.1;start_range=.,1;transl_table=11 PYKB01000506.1 Genbank gene 512 1642 . + . ID=gene-C9F09_06500;Name=C9F09_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06500 PYKB01000506.1 Protein Homology CDS 512 1642 . + 0 ID=cds-TGC97459.1;Parent=gene-C9F09_06500;Dbxref=NCBI_GP:TGC97459.1;Name=TGC97459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=C9F09_06500;product=ribonucleoside-diphosphate reductase 1 subunit beta;protein_id=TGC97459.1;transl_table=11 PYKB01000506.1 Genbank gene 1642 1896 . + . ID=gene-C9F09_06505;Name=C9F09_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06505 PYKB01000506.1 Protein Homology CDS 1642 1896 . + 0 ID=cds-TGC97460.1;Parent=gene-C9F09_06505;Dbxref=NCBI_GP:TGC97460.1;Name=TGC97460.1;Note=plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor%2C essential for nucleotide reduction catalyzed by ribonucleotide reductases;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456822.1;locus_tag=C9F09_06505;product=2Fe-2S ferredoxin-like protein;protein_id=TGC97460.1;transl_table=11 PYKB01000506.1 Genbank gene 1898 3088 . - . ID=gene-C9F09_06510;Name=C9F09_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06510 PYKB01000506.1 Protein Homology CDS 1898 3088 . - 0 ID=cds-TGC97461.1;Parent=gene-C9F09_06510;Dbxref=NCBI_GP:TGC97461.1;Name=TGC97461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456823.1;locus_tag=C9F09_06510;product=MFS transporter;protein_id=TGC97461.1;transl_table=11 PYKB01000506.1 Genbank gene 3250 4128 . + . ID=gene-C9F09_06515;Name=C9F09_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06515 PYKB01000506.1 Protein Homology CDS 3250 4128 . + 0 ID=cds-TGC97462.1;Parent=gene-C9F09_06515;Dbxref=NCBI_GP:TGC97462.1;Name=TGC97462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=C9F09_06515;product=LysR family transcriptional regulator;protein_id=TGC97462.1;transl_table=11 PYKB01000506.1 Genbank gene 4244 4762 . - . ID=gene-C9F09_06520;Name=C9F09_06520;end_range=4762,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06520;partial=true PYKB01000506.1 Protein Homology CDS 4244 4762 . - 0 ID=cds-TGC97463.1;Parent=gene-C9F09_06520;Dbxref=NCBI_GP:TGC97463.1;Name=TGC97463.1;end_range=4762,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=C9F09_06520;partial=true;product=glycerophosphodiester phosphodiesterase;protein_id=TGC97463.1;transl_table=11 ##sequence-region PYKB01000442.1 1 4760 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000442.1 Genbank region 1 4760 . + . ID=PYKB01000442.1:1..4760;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000442.1 Genbank gene 1 248 . + . ID=gene-C9F09_05450;Name=C9F09_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05450;partial=true;start_range=.,1 PYKB01000442.1 Protein Homology CDS 1 248 . + 2 ID=cds-TGC98786.1;Parent=gene-C9F09_05450;Dbxref=NCBI_GP:TGC98786.1;Name=TGC98786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457041.1;locus_tag=C9F09_05450;partial=true;product=hypothetical protein;protein_id=TGC98786.1;start_range=.,1;transl_table=11 PYKB01000442.1 Genbank pseudogene 414 745 . - . ID=gene-C9F09_05455;Name=C9F09_05455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05455;pseudo=true PYKB01000442.1 Protein Homology CDS 414 745 . - 0 ID=cds-C9F09_05455;Parent=gene-C9F09_05455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853130.1;locus_tag=C9F09_05455;product=plasmid stabilization protein;pseudo=true;transl_table=11 PYKB01000442.1 Genbank gene 1048 2085 . + . ID=gene-C9F09_05460;Name=C9F09_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05460 PYKB01000442.1 Protein Homology CDS 1048 2085 . + 0 ID=cds-TGC98787.1;Parent=gene-C9F09_05460;Dbxref=NCBI_GP:TGC98787.1;Name=TGC98787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441380.1;locus_tag=C9F09_05460;product=hypothetical protein;protein_id=TGC98787.1;transl_table=11 PYKB01000442.1 Genbank pseudogene 2181 2303 . + . ID=gene-C9F09_05465;Name=C9F09_05465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05465;pseudo=true PYKB01000442.1 Protein Homology CDS 2181 2303 . + 0 ID=cds-C9F09_05465;Parent=gene-C9F09_05465;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340155.1;locus_tag=C9F09_05465;product=integrase;pseudo=true;transl_table=11 PYKB01000442.1 Genbank pseudogene 2402 2782 . + . ID=gene-C9F09_05470;Name=C9F09_05470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05470;pseudo=true PYKB01000442.1 Protein Homology CDS 2402 2782 . + 0 ID=cds-C9F09_05470;Parent=gene-C9F09_05470;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=C9F09_05470;product=IS3 family transposase;pseudo=true;transl_table=11 PYKB01000442.1 Genbank gene 3148 3339 . + . ID=gene-C9F09_05475;Name=C9F09_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05475 PYKB01000442.1 Protein Homology CDS 3148 3339 . + 0 ID=cds-TGC98789.1;Parent=gene-C9F09_05475;Dbxref=NCBI_GP:TGC98789.1;Name=TGC98789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519771.1;locus_tag=C9F09_05475;product=hypothetical protein;protein_id=TGC98789.1;transl_table=11 PYKB01000442.1 Genbank gene 3324 3653 . + . ID=gene-C9F09_05480;Name=C9F09_05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05480 PYKB01000442.1 Protein Homology CDS 3324 3653 . + 0 ID=cds-TGC98788.1;Parent=gene-C9F09_05480;Dbxref=NCBI_GP:TGC98788.1;Name=TGC98788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=C9F09_05480;product=cytoplasmic protein;protein_id=TGC98788.1;transl_table=11 PYKB01000442.1 Genbank pseudogene 3733 4059 . - . ID=gene-C9F09_05485;Name=C9F09_05485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05485;pseudo=true PYKB01000442.1 Protein Homology CDS 3733 4059 . - 0 ID=cds-C9F09_05485;Parent=gene-C9F09_05485;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611140.1;locus_tag=C9F09_05485;product=IS3 family transposase;pseudo=true;transl_table=11 PYKB01000442.1 Genbank pseudogene 4183 4740 . - . ID=gene-C9F09_05490;Name=C9F09_05490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05490;pseudo=true PYKB01000442.1 Protein Homology CDS 4183 4740 . - 0 ID=cds-C9F09_05490;Parent=gene-C9F09_05490;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=C9F09_05490;product=GMP synthase (glutamine-hydrolyzing);pseudo=true;transl_table=11 ##sequence-region PYKB01001578.1 1 4747 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001578.1 Genbank region 1 4747 . + . ID=PYKB01001578.1:1..4747;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001578.1 Genbank gene 1 216 . - . ID=gene-C9F09_27740;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=C9F09_27740;partial=true;start_range=.,1 PYKB01001578.1 Protein Homology CDS 1 216 . - 0 ID=cds-TGC75284.1;Parent=gene-C9F09_27740;Dbxref=NCBI_GP:TGC75284.1;Name=TGC75284.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457758.1;locus_tag=C9F09_27740;partial=true;product=sodium/panthothenate symporter;protein_id=TGC75284.1;start_range=.,1;transl_table=11 PYKB01001578.1 Genbank gene 206 448 . - . ID=gene-C9F09_27745;Name=C9F09_27745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27745 PYKB01001578.1 Protein Homology CDS 206 448 . - 0 ID=cds-TGC75285.1;Parent=gene-C9F09_27745;Dbxref=NCBI_GP:TGC75285.1;Name=TGC75285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=C9F09_27745;product=hypothetical protein;protein_id=TGC75285.1;transl_table=11 PYKB01001578.1 Genbank gene 557 1906 . - . ID=gene-C9F09_27750;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=C9F09_27750 PYKB01001578.1 Protein Homology CDS 557 1906 . - 0 ID=cds-TGC75286.1;Parent=gene-C9F09_27750;Dbxref=NCBI_GP:TGC75286.1;Name=TGC75286.1;gbkey=CDS;gene=accC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=C9F09_27750;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=TGC75286.1;transl_table=11 PYKB01001578.1 Genbank gene 1917 2387 . - . ID=gene-C9F09_27755;Name=C9F09_27755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27755 PYKB01001578.1 Protein Homology CDS 1917 2387 . - 0 ID=cds-TGC75287.1;Parent=gene-C9F09_27755;Dbxref=NCBI_GP:TGC75287.1;Name=TGC75287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457755.1;locus_tag=C9F09_27755;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=TGC75287.1;transl_table=11 PYKB01001578.1 Genbank gene 2780 3379 . - . ID=gene-C9F09_27760;Name=C9F09_27760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27760 PYKB01001578.1 Protein Homology CDS 2780 3379 . - 0 ID=cds-TGC75288.1;Parent=gene-C9F09_27760;Dbxref=NCBI_GP:TGC75288.1;Name=TGC75288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457754.1;locus_tag=C9F09_27760;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=TGC75288.1;transl_table=11 PYKB01001578.1 Genbank gene 3380 4384 . - . ID=gene-C9F09_27765;Name=C9F09_27765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27765 PYKB01001578.1 Protein Homology CDS 3380 4384 . - 0 ID=cds-TGC75289.1;Parent=gene-C9F09_27765;Dbxref=NCBI_GP:TGC75289.1;Name=TGC75289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457753.1;locus_tag=C9F09_27765;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=TGC75289.1;transl_table=11 PYKB01001578.1 Genbank gene 4497 4747 . - . ID=gene-C9F09_27770;Name=C9F09_27770;end_range=4747,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27770;partial=true PYKB01001578.1 Protein Homology CDS 4497 4747 . - 2 ID=cds-TGC75290.1;Parent=gene-C9F09_27770;Dbxref=NCBI_GP:TGC75290.1;Name=TGC75290.1;end_range=4747,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457752.1;locus_tag=C9F09_27770;partial=true;product=oxidoreductase;protein_id=TGC75290.1;transl_table=11 ##sequence-region PYKB01001731.1 1 4746 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001731.1 Genbank region 1 4746 . + . ID=PYKB01001731.1:1..4746;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001731.1 Genbank gene 1 604 . - . ID=gene-C9F09_30320;Name=C9F09_30320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30320;partial=true;start_range=.,1 PYKB01001731.1 Protein Homology CDS 1 604 . - 0 ID=cds-TGC71137.1;Parent=gene-C9F09_30320;Dbxref=NCBI_GP:TGC71137.1;Name=TGC71137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=C9F09_30320;partial=true;product=SLC13 family permease;protein_id=TGC71137.1;start_range=.,1;transl_table=11 PYKB01001731.1 Genbank gene 681 1358 . - . ID=gene-C9F09_30325;Name=C9F09_30325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30325 PYKB01001731.1 Protein Homology CDS 681 1358 . - 0 ID=cds-TGC71138.1;Parent=gene-C9F09_30325;Dbxref=NCBI_GP:TGC71138.1;Name=TGC71138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456876.3;locus_tag=C9F09_30325;product=sugar phosphatase;protein_id=TGC71138.1;transl_table=11 PYKB01001731.1 Genbank gene 1351 1845 . - . ID=gene-C9F09_30330;Name=C9F09_30330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30330 PYKB01001731.1 Protein Homology CDS 1351 1845 . - 0 ID=cds-TGC71142.1;Parent=gene-C9F09_30330;Dbxref=NCBI_GP:TGC71142.1;Name=TGC71142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456877.1;locus_tag=C9F09_30330;product=YfbU family protein;protein_id=TGC71142.1;transl_table=11 PYKB01001731.1 Genbank gene 1928 2383 . - . ID=gene-C9F09_30335;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=C9F09_30335 PYKB01001731.1 Protein Homology CDS 1928 2383 . - 0 ID=cds-TGC71139.1;Parent=gene-C9F09_30335;Dbxref=NCBI_GP:TGC71139.1;Name=TGC71139.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=C9F09_30335;product=DUF412 domain-containing protein;protein_id=TGC71139.1;transl_table=11 PYKB01001731.1 Genbank gene 2723 3925 . + . ID=gene-C9F09_30340;Name=C9F09_30340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30340 PYKB01001731.1 Protein Homology CDS 2723 3925 . + 0 ID=cds-TGC71140.1;Parent=gene-C9F09_30340;Dbxref=NCBI_GP:TGC71140.1;Name=TGC71140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=C9F09_30340;product=acetate kinase;protein_id=TGC71140.1;transl_table=11 PYKB01001731.1 Genbank gene 4002 4746 . + . ID=gene-C9F09_30345;Name=C9F09_30345;end_range=4746,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30345;partial=true PYKB01001731.1 Protein Homology CDS 4002 4746 . + 0 ID=cds-TGC71141.1;Parent=gene-C9F09_30345;Dbxref=NCBI_GP:TGC71141.1;Name=TGC71141.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;end_range=4746,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456880.1;locus_tag=C9F09_30345;partial=true;product=phosphate acetyltransferase;protein_id=TGC71141.1;transl_table=11 ##sequence-region PYKB01001710.1 1 4741 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001710.1 Genbank region 1 4741 . + . ID=PYKB01001710.1:1..4741;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001710.1 Genbank gene 1 885 . + . ID=gene-C9F09_29880;Name=C9F09_29880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29880;partial=true;start_range=.,1 PYKB01001710.1 Protein Homology CDS 1 885 . + 0 ID=cds-TGC71759.1;Parent=gene-C9F09_29880;Dbxref=NCBI_GP:TGC71759.1;Name=TGC71759.1;Note=catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458267.1;locus_tag=C9F09_29880;partial=true;product=xylulokinase;protein_id=TGC71759.1;start_range=.,1;transl_table=11 PYKB01001710.1 Genbank gene 1060 1413 . + . ID=gene-C9F09_29885;Name=C9F09_29885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29885 PYKB01001710.1 Protein Homology CDS 1060 1413 . + 0 ID=cds-TGC71760.1;Parent=gene-C9F09_29885;Dbxref=NCBI_GP:TGC71760.1;Name=TGC71760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458268.1;locus_tag=C9F09_29885;product=hypothetical protein;protein_id=TGC71760.1;transl_table=11 PYKB01001710.1 Genbank gene 1434 2429 . - . ID=gene-C9F09_29890;Name=C9F09_29890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29890 PYKB01001710.1 Protein Homology CDS 1434 2429 . - 0 ID=cds-TGC71761.1;Parent=gene-C9F09_29890;Dbxref=NCBI_GP:TGC71761.1;Name=TGC71761.1;Note=involved in enterobacterial common antigen biosynthesis%3B catalyzes the addition of O-acetyl groups to the N-acetyl-D-glucosamine residues of the trisaccharide repeat units of the enterobacterial common antigen;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=C9F09_29890;product=O-acetyltransferase;protein_id=TGC71761.1;transl_table=11 PYKB01001710.1 Genbank gene 2468 2689 . + . ID=gene-C9F09_29895;Name=C9F09_29895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29895 PYKB01001710.1 Protein Homology CDS 2468 2689 . + 0 ID=cds-TGC71762.1;Parent=gene-C9F09_29895;Dbxref=NCBI_GP:TGC71762.1;Name=TGC71762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219346.1;locus_tag=C9F09_29895;product=hypothetical protein;protein_id=TGC71762.1;transl_table=11 PYKB01001710.1 Genbank gene 2595 2897 . + . ID=gene-C9F09_29900;Name=C9F09_29900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29900 PYKB01001710.1 Protein Homology CDS 2595 2897 . + 0 ID=cds-TGC71763.1;Parent=gene-C9F09_29900;Dbxref=NCBI_GP:TGC71763.1;Name=TGC71763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=C9F09_29900;product=lipoprotein;protein_id=TGC71763.1;transl_table=11 PYKB01001710.1 Genbank gene 3036 3947 . + . ID=gene-C9F09_29905;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=C9F09_29905 PYKB01001710.1 Protein Homology CDS 3036 3947 . + 0 ID=cds-TGC71764.1;Parent=gene-C9F09_29905;Dbxref=NCBI_GP:TGC71764.1;Name=TGC71764.1;gbkey=CDS;gene=glyQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=C9F09_29905;product=glycine--tRNA ligase subunit alpha;protein_id=TGC71764.1;transl_table=11 PYKB01001710.1 Genbank gene 3957 4741 . + . ID=gene-C9F09_29910;Name=glyS;end_range=4741,.;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=C9F09_29910;partial=true PYKB01001710.1 Protein Homology CDS 3957 4741 . + 0 ID=cds-TGC71765.1;Parent=gene-C9F09_29910;Dbxref=NCBI_GP:TGC71765.1;Name=TGC71765.1;end_range=4741,.;gbkey=CDS;gene=glyS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=C9F09_29910;partial=true;product=glycine--tRNA ligase subunit beta;protein_id=TGC71765.1;transl_table=11 ##sequence-region PYKB01000969.1 1 4729 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000969.1 Genbank region 1 4729 . + . ID=PYKB01000969.1:1..4729;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000969.1 Genbank gene 147 1766 . + . ID=gene-C9F09_16035;Name=C9F09_16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16035 PYKB01000969.1 Protein Homology CDS 147 1766 . + 0 ID=cds-TGC88907.1;Parent=gene-C9F09_16035;Dbxref=NCBI_GP:TGC88907.1;Name=TGC88907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=C9F09_16035;product=sensor histidine kinase;protein_id=TGC88907.1;transl_table=11 PYKB01000969.1 Genbank gene 1768 2454 . + . ID=gene-C9F09_16040;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=C9F09_16040 PYKB01000969.1 Protein Homology CDS 1768 2454 . + 0 ID=cds-TGC88904.1;Parent=gene-C9F09_16040;Dbxref=NCBI_GP:TGC88904.1;Name=TGC88904.1;Note=regulates the expression of citrate fermentation genes;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=C9F09_16040;product=response regulator;protein_id=TGC88904.1;transl_table=11 PYKB01000969.1 Genbank gene 2476 3396 . - . ID=gene-C9F09_16045;Name=C9F09_16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16045 PYKB01000969.1 Protein Homology CDS 2476 3396 . - 0 ID=cds-TGC88905.1;Parent=gene-C9F09_16045;Dbxref=NCBI_GP:TGC88905.1;Name=TGC88905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454662.1;locus_tag=C9F09_16045;product=ribonucleoside hydrolase RihC;protein_id=TGC88905.1;transl_table=11 PYKB01000969.1 Genbank gene 3412 4614 . - . ID=gene-C9F09_16050;Name=C9F09_16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16050 PYKB01000969.1 Protein Homology CDS 3412 4614 . - 0 ID=cds-TGC88906.1;Parent=gene-C9F09_16050;Dbxref=NCBI_GP:TGC88906.1;Name=TGC88906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=C9F09_16050;product=nitrite reductase;protein_id=TGC88906.1;transl_table=11 ##sequence-region PYKB01001243.1 1 4723 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001243.1 Genbank region 1 4723 . + . ID=PYKB01001243.1:1..4723;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001243.1 Genbank pseudogene 1 1013 . + . ID=gene-C9F09_21200;Name=C9F09_21200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21200;pseudo=true PYKB01001243.1 Protein Homology CDS 1 1013 . + 2 ID=cds-C9F09_21200;Parent=gene-C9F09_21200;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=C9F09_21200;product=tripartite tricarboxylate transporter TctA;pseudo=true;transl_table=11 PYKB01001243.1 Genbank gene 1317 2294 . + . ID=gene-C9F09_21205;Name=C9F09_21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21205 PYKB01001243.1 Protein Homology CDS 1317 2294 . + 0 ID=cds-TGC82590.1;Parent=gene-C9F09_21205;Dbxref=NCBI_GP:TGC82590.1;Name=TGC82590.1;Note=in Escherichia coli this gene is induced by carbon starvation and depends on sigma S and cAMP-CRP%3B the structure of the Gab protein shows it is a member of non-heme iron (II)-dependent oxygenase superfamily which includes clavamini acid synthases%3B forms homotetramers in solution;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004592610.1;locus_tag=C9F09_21205;product=protein CsiD;protein_id=TGC82590.1;transl_table=11 PYKB01001243.1 Genbank gene 2320 3588 . + . ID=gene-C9F09_21210;Name=C9F09_21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21210 PYKB01001243.1 Protein Homology CDS 2320 3588 . + 0 ID=cds-TGC82591.1;Parent=gene-C9F09_21210;Dbxref=NCBI_GP:TGC82591.1;Name=TGC82591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457189.1;locus_tag=C9F09_21210;product=L-2-hydroxyglutarate oxidase;protein_id=TGC82591.1;transl_table=11 PYKB01001243.1 Genbank gene 3610 4723 . + . ID=gene-C9F09_21215;Name=C9F09_21215;end_range=4723,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21215;partial=true PYKB01001243.1 Protein Homology CDS 3610 4723 . + 0 ID=cds-TGC82592.1;Parent=gene-C9F09_21215;Dbxref=NCBI_GP:TGC82592.1;Name=TGC82592.1;end_range=4723,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=C9F09_21215;partial=true;product=succinate-semialdehyde dehydrogenase (NADP(+));protein_id=TGC82592.1;transl_table=11 ##sequence-region PYKB01000980.1 1 12571 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000980.1 Genbank region 1 12571 . + . ID=PYKB01000980.1:1..12571;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000980.1 Genbank gene 1 807 . - . ID=gene-C9F09_16240;Name=C9F09_16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16240;partial=true;start_range=.,1 PYKB01000980.1 Protein Homology CDS 1 807 . - 0 ID=cds-TGC88659.1;Parent=gene-C9F09_16240;Dbxref=NCBI_GP:TGC88659.1;Name=TGC88659.1;Note=catalyzes the formation of malate from fumerate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458599.1;locus_tag=C9F09_16240;partial=true;product=fumarate hydratase;protein_id=TGC88659.1;start_range=.,1;transl_table=11 PYKB01000980.1 Genbank gene 903 2243 . - . ID=gene-C9F09_16245;Name=C9F09_16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16245 PYKB01000980.1 Protein Homology CDS 903 2243 . - 0 ID=cds-TGC88660.1;Parent=gene-C9F09_16245;Dbxref=NCBI_GP:TGC88660.1;Name=TGC88660.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate%2C malate%2C fumarate and succinate) transporters;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=C9F09_16245;product=anaerobic C4-dicarboxylate transporter;protein_id=TGC88660.1;transl_table=11 PYKB01000980.1 Genbank gene 2390 2656 . - . ID=gene-C9F09_16250;Name=C9F09_16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16250 PYKB01000980.1 Protein Homology CDS 2390 2656 . - 0 ID=cds-TGC88661.1;Parent=gene-C9F09_16250;Dbxref=NCBI_GP:TGC88661.1;Name=TGC88661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=C9F09_16250;product=hypothetical protein;protein_id=TGC88661.1;transl_table=11 PYKB01000980.1 Genbank pseudogene 2973 3692 . - . ID=gene-C9F09_16255;Name=C9F09_16255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16255;pseudo=true PYKB01000980.1 Protein Homology CDS 2973 3692 . - 0 ID=cds-C9F09_16255;Parent=gene-C9F09_16255;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=C9F09_16255;product=two-component system response regulator DcuR;pseudo=true;transl_table=11 PYKB01000980.1 Genbank gene 3689 5320 . - . ID=gene-C9F09_16260;Name=C9F09_16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16260 PYKB01000980.1 Protein Homology CDS 3689 5320 . - 0 ID=cds-TGC88662.1;Parent=gene-C9F09_16260;Dbxref=NCBI_GP:TGC88662.1;Name=TGC88662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458603.1;locus_tag=C9F09_16260;product=two-component system sensor histidine kinase DcuS;protein_id=TGC88662.1;transl_table=11 PYKB01000980.1 Genbank gene 5725 8124 . + . ID=gene-C9F09_16265;Name=C9F09_16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16265 PYKB01000980.1 Protein Homology CDS 5725 8124 . + 0 ID=cds-TGC88667.1;Parent=gene-C9F09_16265;Dbxref=NCBI_GP:TGC88667.1;Name=TGC88667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463170.3;locus_tag=C9F09_16265;product=dimethyl sulfoxide reductase subunit A;protein_id=TGC88667.1;transl_table=11 PYKB01000980.1 Genbank gene 8138 8764 . + . ID=gene-C9F09_16270;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=C9F09_16270 PYKB01000980.1 Protein Homology CDS 8138 8764 . + 0 ID=cds-TGC88663.1;Parent=gene-C9F09_16270;Dbxref=NCBI_GP:TGC88663.1;Name=TGC88663.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=C9F09_16270;product=dimethylsulfoxide reductase%2C chain B;protein_id=TGC88663.1;transl_table=11 PYKB01000980.1 Genbank gene 8757 9530 . + . ID=gene-C9F09_16275;Name=C9F09_16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16275 PYKB01000980.1 Protein Homology CDS 8757 9530 . + 0 ID=cds-TGC88664.1;Parent=gene-C9F09_16275;Dbxref=NCBI_GP:TGC88664.1;Name=TGC88664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=C9F09_16275;product=dimethyl sulfoxide reductase;protein_id=TGC88664.1;transl_table=11 PYKB01000980.1 Genbank gene 9546 10199 . + . ID=gene-C9F09_16280;Name=C9F09_16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16280 PYKB01000980.1 Protein Homology CDS 9546 10199 . + 0 ID=cds-TGC88665.1;Parent=gene-C9F09_16280;Dbxref=NCBI_GP:TGC88665.1;Name=TGC88665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463173.1;locus_tag=C9F09_16280;product=dehydrogenase;protein_id=TGC88665.1;transl_table=11 PYKB01000980.1 Genbank gene 10283 11683 . - . ID=gene-C9F09_16285;Name=C9F09_16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16285 PYKB01000980.1 Protein Homology CDS 10283 11683 . - 0 ID=cds-TGC88666.1;Parent=gene-C9F09_16285;Dbxref=NCBI_GP:TGC88666.1;Name=TGC88666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=C9F09_16285;product=hypothetical protein;protein_id=TGC88666.1;transl_table=11 PYKB01000980.1 Genbank gene 11987 12571 . + . ID=gene-C9F09_16290;Name=C9F09_16290;end_range=12571,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16290;partial=true PYKB01000980.1 Protein Homology CDS 11987 12571 . + 0 ID=cds-TGC88668.1;Parent=gene-C9F09_16290;Dbxref=NCBI_GP:TGC88668.1;Name=TGC88668.1;end_range=12571,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458607.1;locus_tag=C9F09_16290;partial=true;product=hypothetical protein;protein_id=TGC88668.1;transl_table=11 ##sequence-region PYKB01000563.1 1 4722 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000563.1 Genbank region 1 4722 . + . ID=PYKB01000563.1:1..4722;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000563.1 Genbank gene 1 665 . - . ID=gene-C9F09_07810;Name=C9F09_07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07810;partial=true;start_range=.,1 PYKB01000563.1 Protein Homology CDS 1 665 . - 0 ID=cds-TGC96217.1;Parent=gene-C9F09_07810;Dbxref=NCBI_GP:TGC96217.1;Name=TGC96217.1;Note=FAD/NAD(P)-binding domain%3B possibly part of an electron transfer system required for anaerobic carnitine reduction;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454687.1;locus_tag=C9F09_07810;partial=true;product=FAD-dependent oxidoreductase;protein_id=TGC96217.1;start_range=.,1;transl_table=11 PYKB01000563.1 Genbank gene 715 1656 . - . ID=gene-C9F09_07815;Name=C9F09_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07815 PYKB01000563.1 Protein Homology CDS 715 1656 . - 0 ID=cds-TGC96218.1;Parent=gene-C9F09_07815;Dbxref=NCBI_GP:TGC96218.1;Name=TGC96218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454686.1;locus_tag=C9F09_07815;product=protein FixB;protein_id=TGC96218.1;transl_table=11 PYKB01000563.1 Genbank gene 1672 2442 . - . ID=gene-C9F09_07820;Name=C9F09_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07820 PYKB01000563.1 Protein Homology CDS 1672 2442 . - 0 ID=cds-TGC96219.1;Parent=gene-C9F09_07820;Dbxref=NCBI_GP:TGC96219.1;Name=TGC96219.1;Note=required for anaerobic carnitine reduction%2C may act to transfer electrons to crotonobetaine reductase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=C9F09_07820;product=electron transfer flavoprotein;protein_id=TGC96219.1;transl_table=11 PYKB01000563.1 Genbank gene 2923 4440 . + . ID=gene-C9F09_07825;Name=C9F09_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07825 PYKB01000563.1 Protein Homology CDS 2923 4440 . + 0 ID=cds-TGC96220.1;Parent=gene-C9F09_07825;Dbxref=NCBI_GP:TGC96220.1;Name=TGC96220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=C9F09_07825;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=TGC96220.1;transl_table=11 PYKB01000563.1 Genbank gene 4475 4722 . + . ID=gene-C9F09_07830;Name=C9F09_07830;end_range=4722,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07830;partial=true PYKB01000563.1 Protein Homology CDS 4475 4722 . + 0 ID=cds-TGC96221.1;Parent=gene-C9F09_07830;Dbxref=NCBI_GP:TGC96221.1;Name=TGC96221.1;Note=catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA;end_range=4722,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=C9F09_07830;partial=true;product=crotonobetainyl-CoA--carnitine CoA-transferase;protein_id=TGC96221.1;transl_table=11 ##sequence-region PYKB01001341.1 1 4722 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001341.1 Genbank region 1 4722 . + . ID=PYKB01001341.1:1..4722;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001341.1 Genbank gene 1 340 . + . ID=gene-C9F09_23080;Name=C9F09_23080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23080;partial=true;start_range=.,1 PYKB01001341.1 Protein Homology CDS 1 340 . + 1 ID=cds-TGC80704.1;Parent=gene-C9F09_23080;Dbxref=NCBI_GP:TGC80704.1;Name=TGC80704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458551.1;locus_tag=C9F09_23080;partial=true;product=hypothetical protein;protein_id=TGC80704.1;start_range=.,1;transl_table=11 PYKB01001341.1 Genbank gene 327 665 . + . ID=gene-C9F09_23085;Name=C9F09_23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23085 PYKB01001341.1 Protein Homology CDS 327 665 . + 0 ID=cds-TGC80705.1;Parent=gene-C9F09_23085;Dbxref=NCBI_GP:TGC80705.1;Name=TGC80705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458550.1;locus_tag=C9F09_23085;product=hypothetical protein;protein_id=TGC80705.1;transl_table=11 PYKB01001341.1 Genbank gene 666 1022 . - . ID=gene-C9F09_23090;Name=C9F09_23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23090 PYKB01001341.1 Protein Homology CDS 666 1022 . - 0 ID=cds-TGC80706.1;Parent=gene-C9F09_23090;Dbxref=NCBI_GP:TGC80706.1;Name=TGC80706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=C9F09_23090;product=MmcQ/YjbR family DNA-binding protein;protein_id=TGC80706.1;transl_table=11 PYKB01001341.1 Genbank gene 1025 1441 . - . ID=gene-C9F09_23095;Name=C9F09_23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23095 PYKB01001341.1 Protein Homology CDS 1025 1441 . - 0 ID=cds-TGC80707.1;Parent=gene-C9F09_23095;Dbxref=NCBI_GP:TGC80707.1;Name=TGC80707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458548.1;locus_tag=C9F09_23095;product=thiamine phosphate synthase;protein_id=TGC80707.1;transl_table=11 PYKB01001341.1 Genbank gene 1570 2283 . - . ID=gene-C9F09_23100;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=C9F09_23100 PYKB01001341.1 Protein Homology CDS 1570 2283 . - 0 ID=cds-TGC80708.1;Parent=gene-C9F09_23100;Dbxref=NCBI_GP:TGC80708.1;Name=TGC80708.1;Note=Class B%3B non-specific%3B catalyzes the dephosphorylation of organic phosphomonoesters%3B also has phosphotransferase activity;gbkey=CDS;gene=aphA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=C9F09_23100;product=acid phosphatase AphA;protein_id=TGC80708.1;transl_table=11 PYKB01001341.1 Genbank gene 2330 2560 . + . ID=gene-C9F09_23105;Name=C9F09_23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23105 PYKB01001341.1 Protein Homology CDS 2330 2560 . + 0 ID=cds-TGC80709.1;Parent=gene-C9F09_23105;Dbxref=NCBI_GP:TGC80709.1;Name=TGC80709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001309134.1;locus_tag=C9F09_23105;product=hypothetical protein;protein_id=TGC80709.1;transl_table=11 PYKB01001341.1 Genbank gene 2470 3663 . - . ID=gene-C9F09_23110;Name=C9F09_23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23110 PYKB01001341.1 Protein Homology CDS 2470 3663 . - 0 ID=cds-TGC80710.1;Parent=gene-C9F09_23110;Dbxref=NCBI_GP:TGC80710.1;Name=TGC80710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=C9F09_23110;product=aromatic amino acid transaminase;protein_id=TGC80710.1;transl_table=11 PYKB01001341.1 Genbank gene 3849 4722 . - . ID=gene-C9F09_23115;Name=alr;end_range=4722,.;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=C9F09_23115;partial=true PYKB01001341.1 Protein Homology CDS 3849 4722 . - 1 ID=cds-TGC80711.1;Parent=gene-C9F09_23115;Dbxref=NCBI_GP:TGC80711.1;Name=TGC80711.1;end_range=4722,.;gbkey=CDS;gene=alr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458545.1;locus_tag=C9F09_23115;partial=true;product=alanine racemase;protein_id=TGC80711.1;transl_table=11 ##sequence-region PYKB01001415.1 1 4719 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001415.1 Genbank region 1 4719 . + . ID=PYKB01001415.1:1..4719;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001415.1 Genbank gene 61 2547 . + . ID=gene-C9F09_24340;Name=C9F09_24340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24340 PYKB01001415.1 Protein Homology CDS 61 2547 . + 0 ID=cds-TGC79146.1;Parent=gene-C9F09_24340;Dbxref=NCBI_GP:TGC79146.1;Name=TGC79146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000413359.1;locus_tag=C9F09_24340;product=fimbrial assembly protein;protein_id=TGC79146.1;transl_table=11 PYKB01001415.1 Genbank gene 2563 3585 . + . ID=gene-C9F09_24345;Name=C9F09_24345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24345 PYKB01001415.1 Protein Homology CDS 2563 3585 . + 0 ID=cds-TGC79147.1;Parent=gene-C9F09_24345;Dbxref=NCBI_GP:TGC79147.1;Name=TGC79147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825913.1;locus_tag=C9F09_24345;product=fimbrial assembly protein;protein_id=TGC79147.1;transl_table=11 PYKB01001415.1 Genbank gene 3629 3943 . - . ID=gene-C9F09_24350;Name=C9F09_24350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24350 PYKB01001415.1 Protein Homology CDS 3629 3943 . - 0 ID=cds-TGC79148.1;Parent=gene-C9F09_24350;Dbxref=NCBI_GP:TGC79148.1;Name=TGC79148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456707.1;locus_tag=C9F09_24350;product=heavy metal resistance protein;protein_id=TGC79148.1;transl_table=11 PYKB01001415.1 cmsearch riboswitch 4225 4321 . + . ID=id-PYKB01001415.1:4225..4321;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00059,COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PYKB01001415.1 Genbank gene 4353 4719 . + . ID=gene-C9F09_24355;Name=C9F09_24355;end_range=4719,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24355;partial=true PYKB01001415.1 Protein Homology CDS 4353 4719 . + 0 ID=cds-TGC79149.1;Parent=gene-C9F09_24355;Dbxref=NCBI_GP:TGC79149.1;Name=TGC79149.1;end_range=4719,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456706.1;locus_tag=C9F09_24355;partial=true;product=hydroxyethylthiazole kinase;protein_id=TGC79149.1;transl_table=11 ##sequence-region PYKB01001699.1 1 4700 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001699.1 Genbank region 1 4700 . + . ID=PYKB01001699.1:1..4700;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001699.1 Genbank pseudogene 47 694 . + . ID=gene-C9F09_29690;Name=C9F09_29690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29690;pseudo=true PYKB01001699.1 Protein Homology CDS 47 694 . + 0 ID=cds-C9F09_29690;Parent=gene-C9F09_29690;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=C9F09_29690;product=3-deoxy-7-phosphoheptulonate synthase;pseudo=true;transl_table=11 PYKB01001699.1 Genbank gene 851 1042 . + . ID=gene-C9F09_29695;Name=C9F09_29695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29695 PYKB01001699.1 Protein Homology CDS 851 1042 . + 0 ID=cds-TGC72078.1;Parent=gene-C9F09_29695;Dbxref=NCBI_GP:TGC72078.1;Name=TGC72078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456165.1;locus_tag=C9F09_29695;product=hemin uptake protein HemP;protein_id=TGC72078.1;transl_table=11 PYKB01001699.1 Genbank gene 1077 2519 . - . ID=gene-C9F09_29700;Name=C9F09_29700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29700 PYKB01001699.1 Protein Homology CDS 1077 2519 . - 0 ID=cds-TGC72079.1;Parent=gene-C9F09_29700;Dbxref=NCBI_GP:TGC72079.1;Name=TGC72079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=C9F09_29700;product=YdiU family protein;protein_id=TGC72079.1;transl_table=11 PYKB01001699.1 Genbank gene 2581 3291 . - . ID=gene-C9F09_29705;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=C9F09_29705 PYKB01001699.1 Protein Homology CDS 2581 3291 . - 0 ID=cds-TGC72080.1;Parent=gene-C9F09_29705;Dbxref=NCBI_GP:TGC72080.1;Name=TGC72080.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=C9F09_29705;product=anti-FlhDC factor YdiV;protein_id=TGC72080.1;transl_table=11 PYKB01001699.1 Genbank gene 3605 4069 . - . ID=gene-C9F09_29710;Name=C9F09_29710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29710 PYKB01001699.1 Protein Homology CDS 3605 4069 . - 0 ID=cds-TGC72081.1;Parent=gene-C9F09_29710;Dbxref=NCBI_GP:TGC72081.1;Name=TGC72081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=C9F09_29710;product=endopeptidase;protein_id=TGC72081.1;transl_table=11 PYKB01001699.1 Genbank gene 4146 4700 . - . ID=gene-C9F09_29715;Name=C9F09_29715;end_range=4700,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29715;partial=true PYKB01001699.1 Protein Homology CDS 4146 4700 . - 0 ID=cds-TGC72082.1;Parent=gene-C9F09_29715;Dbxref=NCBI_GP:TGC72082.1;Name=TGC72082.1;end_range=4700,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456169.1;locus_tag=C9F09_29715;partial=true;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=TGC72082.1;transl_table=11 ##sequence-region PYKB01000953.1 1 4694 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000953.1 Genbank region 1 4694 . + . ID=PYKB01000953.1:1..4694;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000953.1 Genbank gene 1 276 . - . ID=gene-C9F09_15760;Name=C9F09_15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15760;partial=true;start_range=.,1 PYKB01000953.1 GeneMarkS+ CDS 1 276 . - 0 ID=cds-TGC89245.1;Parent=gene-C9F09_15760;Dbxref=NCBI_GP:TGC89245.1;Name=TGC89245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_15760;partial=true;product=hypothetical protein;protein_id=TGC89245.1;start_range=.,1;transl_table=11 PYKB01000953.1 Genbank pseudogene 301 461 . - . ID=gene-C9F09_15765;Name=C9F09_15765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15765;pseudo=true PYKB01000953.1 Protein Homology CDS 301 461 . - 0 ID=cds-C9F09_15765;Parent=gene-C9F09_15765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001658456.1;locus_tag=C9F09_15765;product=arylsulfatase;pseudo=true;transl_table=11 PYKB01000953.1 Genbank gene 1260 1709 . + . ID=gene-C9F09_15770;Name=C9F09_15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15770 PYKB01000953.1 Protein Homology CDS 1260 1709 . + 0 ID=cds-TGC89246.1;Parent=gene-C9F09_15770;Dbxref=NCBI_GP:TGC89246.1;Name=TGC89246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454640.1;locus_tag=C9F09_15770;product=transcriptional regulator;protein_id=TGC89246.1;transl_table=11 PYKB01000953.1 Genbank gene 1809 2096 . - . ID=gene-C9F09_15775;Name=C9F09_15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15775 PYKB01000953.1 Protein Homology CDS 1809 2096 . - 0 ID=cds-TGC89247.1;Parent=gene-C9F09_15775;Dbxref=NCBI_GP:TGC89247.1;Name=TGC89247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454639.1;locus_tag=C9F09_15775;product=hypothetical protein;protein_id=TGC89247.1;transl_table=11 PYKB01000953.1 Genbank gene 2135 2980 . - . ID=gene-C9F09_15780;Name=C9F09_15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15780 PYKB01000953.1 Protein Homology CDS 2135 2980 . - 0 ID=cds-TGC89248.1;Parent=gene-C9F09_15780;Dbxref=NCBI_GP:TGC89248.1;Name=TGC89248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454638.1;locus_tag=C9F09_15780;product=DsbA family protein;protein_id=TGC89248.1;transl_table=11 PYKB01000953.1 Genbank gene 3045 3776 . - . ID=gene-C9F09_15785;Name=C9F09_15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15785 PYKB01000953.1 Protein Homology CDS 3045 3776 . - 0 ID=cds-TGC89249.1;Parent=gene-C9F09_15785;Dbxref=NCBI_GP:TGC89249.1;Name=TGC89249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=C9F09_15785;product=pili assembly chaperone;protein_id=TGC89249.1;transl_table=11 PYKB01000953.1 Genbank gene 3742 4260 . - . ID=gene-C9F09_15790;Name=C9F09_15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15790 PYKB01000953.1 Protein Homology CDS 3742 4260 . - 0 ID=cds-TGC89250.1;Parent=gene-C9F09_15790;Dbxref=NCBI_GP:TGC89250.1;Name=TGC89250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=C9F09_15790;product=fimbrial protein;protein_id=TGC89250.1;transl_table=11 PYKB01000953.1 Genbank gene 4276 4694 . - . ID=gene-C9F09_15795;Name=C9F09_15795;end_range=4694,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15795;partial=true PYKB01000953.1 Protein Homology CDS 4276 4694 . - 2 ID=cds-TGC89251.1;Parent=gene-C9F09_15795;Dbxref=NCBI_GP:TGC89251.1;Name=TGC89251.1;end_range=4694,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454635.1;locus_tag=C9F09_15795;partial=true;product=fimbrial protein;protein_id=TGC89251.1;transl_table=11 ##sequence-region PYKB01000418.1 1 4693 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000418.1 Genbank region 1 4693 . + . ID=PYKB01000418.1:1..4693;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000418.1 Genbank gene 1 1116 . + . ID=gene-C9F09_04795;Name=C9F09_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04795;partial=true;start_range=.,1 PYKB01000418.1 Protein Homology CDS 1 1116 . + 0 ID=cds-TGC99295.1;Parent=gene-C9F09_04795;Dbxref=NCBI_GP:TGC99295.1;Name=TGC99295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=C9F09_04795;partial=true;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=TGC99295.1;start_range=.,1;transl_table=11 PYKB01000418.1 Genbank gene 1118 2047 . + . ID=gene-C9F09_04800;Name=C9F09_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04800 PYKB01000418.1 Protein Homology CDS 1118 2047 . + 0 ID=cds-TGC99296.1;Parent=gene-C9F09_04800;Dbxref=NCBI_GP:TGC99296.1;Name=TGC99296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454613.1;locus_tag=C9F09_04800;product=homoserine kinase;protein_id=TGC99296.1;transl_table=11 PYKB01000418.1 Genbank pseudogene 2051 3337 . + . ID=gene-C9F09_04805;Name=C9F09_04805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04805;pseudo=true PYKB01000418.1 Protein Homology CDS 2051 3337 . + 0 ID=cds-C9F09_04805;Parent=gene-C9F09_04805;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=C9F09_04805;product=threonine synthase;pseudo=true;transl_table=11 PYKB01000418.1 Genbank gene 3431 4204 . - . ID=gene-C9F09_04810;Name=C9F09_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04810 PYKB01000418.1 Protein Homology CDS 3431 4204 . - 0 ID=cds-TGC99297.1;Parent=gene-C9F09_04810;Dbxref=NCBI_GP:TGC99297.1;Name=TGC99297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=C9F09_04810;product=peroxide stress protein YaaA;protein_id=TGC99297.1;transl_table=11 PYKB01000418.1 Genbank gene 4283 4693 . - . ID=gene-C9F09_04815;Name=C9F09_04815;end_range=4693,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04815;partial=true PYKB01000418.1 Protein Homology CDS 4283 4693 . - 0 ID=cds-TGC99298.1;Parent=gene-C9F09_04815;Dbxref=NCBI_GP:TGC99298.1;Name=TGC99298.1;end_range=4693,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454616.1;locus_tag=C9F09_04815;partial=true;product=sodium:alanine symporter family protein;protein_id=TGC99298.1;transl_table=11 ##sequence-region PYKB01000816.1 1 4678 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000816.1 Genbank region 1 4678 . + . ID=PYKB01000816.1:1..4678;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000816.1 Genbank pseudogene 53 274 . - . ID=gene-C9F09_12745;Name=C9F09_12745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12745;pseudo=true PYKB01000816.1 Protein Homology CDS 53 274 . - 0 ID=cds-C9F09_12745;Parent=gene-C9F09_12745;Note=involved in the phosphorylation and transport of sugars across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=C9F09_12745;product=PTS ascorbate-specific transporter subunit IIA;pseudo=true;transl_table=11 PYKB01000816.1 Genbank gene 284 589 . - . ID=gene-C9F09_12750;Name=C9F09_12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12750 PYKB01000816.1 Protein Homology CDS 284 589 . - 0 ID=cds-TGC91918.1;Parent=gene-C9F09_12750;Dbxref=NCBI_GP:TGC91918.1;Name=TGC91918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463245.1;locus_tag=C9F09_12750;product=ascorbate-specific phosphotransferase enzyme IIB component;protein_id=TGC91918.1;transl_table=11 PYKB01000816.1 Genbank pseudogene 605 2002 . - . ID=gene-C9F09_12755;Name=C9F09_12755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12755;pseudo=true PYKB01000816.1 Protein Homology CDS 605 2002 . - 0 ID=cds-C9F09_12755;Parent=gene-C9F09_12755;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=C9F09_12755;product=PTS ascorbate transporter subunit IIC;pseudo=true;transl_table=11 PYKB01000816.1 Genbank gene 2350 3429 . + . ID=gene-C9F09_12760;Name=C9F09_12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12760 PYKB01000816.1 Protein Homology CDS 2350 3429 . + 0 ID=cds-TGC91919.1;Parent=gene-C9F09_12760;Dbxref=NCBI_GP:TGC91919.1;Name=TGC91919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576561.1;locus_tag=C9F09_12760;product=L-ascorbate 6-phosphate lactonase;protein_id=TGC91919.1;transl_table=11 PYKB01000816.1 Genbank gene 3534 4289 . + . ID=gene-C9F09_12765;Name=C9F09_12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12765 PYKB01000816.1 Protein Homology CDS 3534 4289 . + 0 ID=cds-TGC91920.1;Parent=gene-C9F09_12765;Dbxref=NCBI_GP:TGC91920.1;Name=TGC91920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458815.1;locus_tag=C9F09_12765;product=transcriptional regulator;protein_id=TGC91920.1;transl_table=11 PYKB01000816.1 Genbank gene 4286 4678 . - . ID=gene-C9F09_12770;Name=C9F09_12770;end_range=4678,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12770;partial=true PYKB01000816.1 Protein Homology CDS 4286 4678 . - 0 ID=cds-TGC91921.1;Parent=gene-C9F09_12770;Dbxref=NCBI_GP:TGC91921.1;Name=TGC91921.1;Note=YjfP%3B esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro%3B unknown function and substrate in vivo;end_range=4678,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458814.1;locus_tag=C9F09_12770;partial=true;product=esterase;protein_id=TGC91921.1;transl_table=11 ##sequence-region PYKB01000981.1 1 4665 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000981.1 Genbank region 1 4665 . + . ID=PYKB01000981.1:1..4665;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000981.1 Genbank gene 86 1189 . - . ID=gene-C9F09_16295;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=C9F09_16295 PYKB01000981.1 Protein Homology CDS 86 1189 . - 0 ID=cds-TGC88585.1;Parent=gene-C9F09_16295;Dbxref=NCBI_GP:TGC88585.1;Name=TGC88585.1;gbkey=CDS;gene=phnW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=C9F09_16295;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=TGC88585.1;transl_table=11 PYKB01000981.1 Genbank gene 1329 2048 . + . ID=gene-C9F09_16300;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=C9F09_16300 PYKB01000981.1 Protein Homology CDS 1329 2048 . + 0 ID=cds-TGC88586.1;Parent=gene-C9F09_16300;Dbxref=NCBI_GP:TGC88586.1;Name=TGC88586.1;gbkey=CDS;gene=phnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455024.1;locus_tag=C9F09_16300;product=phosphonate utilization transcriptional regulator PhnR;protein_id=TGC88586.1;transl_table=11 PYKB01000981.1 Genbank gene 2246 3259 . + . ID=gene-C9F09_16305;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=C9F09_16305 PYKB01000981.1 Protein Homology CDS 2246 3259 . + 0 ID=cds-TGC88587.1;Parent=gene-C9F09_16305;Dbxref=NCBI_GP:TGC88587.1;Name=TGC88587.1;gbkey=CDS;gene=phnS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=C9F09_16305;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=TGC88587.1;transl_table=11 PYKB01000981.1 Genbank gene 3265 4374 . + . ID=gene-C9F09_16310;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=C9F09_16310 PYKB01000981.1 Protein Homology CDS 3265 4374 . + 0 ID=cds-TGC88588.1;Parent=gene-C9F09_16310;Dbxref=NCBI_GP:TGC88588.1;Name=TGC88588.1;gbkey=CDS;gene=phnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455022.1;locus_tag=C9F09_16310;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=TGC88588.1;transl_table=11 PYKB01000981.1 Genbank gene 4377 4665 . + . ID=gene-C9F09_16315;Name=C9F09_16315;end_range=4665,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16315;partial=true PYKB01000981.1 Protein Homology CDS 4377 4665 . + 0 ID=cds-TGC88589.1;Parent=gene-C9F09_16315;Dbxref=NCBI_GP:TGC88589.1;Name=TGC88589.1;Note=involved in the transport of 2-aminoethylphosphonate into the cell;end_range=4665,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459422.1;locus_tag=C9F09_16315;partial=true;product=2-aminoethylphosphonate ABC transporter permease;protein_id=TGC88589.1;transl_table=11 ##sequence-region PYKB01000140.1 1 4663 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000140.1 Genbank region 1 4663 . + . ID=PYKB01000140.1:1..4663;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000140.1 Genbank gene 1 304 . - . ID=gene-C9F09_01590;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=C9F09_01590;partial=true;start_range=.,1 PYKB01000140.1 Protein Homology CDS 1 304 . - 0 ID=cds-TGD04611.1;Parent=gene-C9F09_01590;Dbxref=NCBI_GP:TGD04611.1;Name=TGD04611.1;gbkey=CDS;gene=mreC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457749.1;locus_tag=C9F09_01590;partial=true;product=rod shape-determining protein MreC;protein_id=TGD04611.1;start_range=.,1;transl_table=11 PYKB01000140.1 Genbank gene 369 1412 . - . ID=gene-C9F09_01595;Name=C9F09_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01595 PYKB01000140.1 Protein Homology CDS 369 1412 . - 0 ID=cds-TGD04612.1;Parent=gene-C9F09_01595;Dbxref=NCBI_GP:TGD04612.1;Name=TGD04612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=C9F09_01595;product=rod shape-determining protein;protein_id=TGD04612.1;transl_table=11 PYKB01000140.1 Genbank pseudogene 1390 1569 . + . ID=gene-C9F09_01600;Name=C9F09_01600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01600;pseudo=true PYKB01000140.1 Protein Homology CDS 1390 1569 . + 0 ID=cds-C9F09_01600;Parent=gene-C9F09_01600;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328392.1;locus_tag=C9F09_01600;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000140.1 Genbank gene 1520 1711 . + . ID=gene-C9F09_01605;Name=C9F09_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01605 PYKB01000140.1 Protein Homology CDS 1520 1711 . + 0 ID=cds-TGD04613.1;Parent=gene-C9F09_01605;Dbxref=NCBI_GP:TGD04613.1;Name=TGD04613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002414384.1;locus_tag=C9F09_01605;product=hypothetical protein;protein_id=TGD04613.1;transl_table=11 PYKB01000140.1 Genbank gene 1720 3660 . - . ID=gene-C9F09_01610;Name=C9F09_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01610 PYKB01000140.1 Protein Homology CDS 1720 3660 . - 0 ID=cds-TGD04614.1;Parent=gene-C9F09_01610;Dbxref=NCBI_GP:TGD04614.1;Name=TGD04614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457751.1;locus_tag=C9F09_01610;product=RNase E specificity factor CsrD;protein_id=TGD04614.1;transl_table=11 PYKB01000140.1 Genbank pseudogene 3864 4598 . + . ID=gene-C9F09_01615;Name=C9F09_01615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01615;pseudo=true PYKB01000140.1 Protein Homology CDS 3864 4598 . + 0 ID=cds-C9F09_01615;Parent=gene-C9F09_01615;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457752.1;locus_tag=C9F09_01615;product=oxidoreductase;pseudo=true;transl_table=11 ##sequence-region PYKB01000120.1 1 4661 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000120.1 Genbank region 1 4661 . + . ID=PYKB01000120.1:1..4661;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000120.1 Genbank pseudogene 63 320 . + . ID=gene-C9F09_01380;Name=C9F09_01380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01380;pseudo=true PYKB01000120.1 Protein Homology CDS 63 320 . + 0 ID=cds-C9F09_01380;Parent=gene-C9F09_01380;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=C9F09_01380;product=transcriptional regulator;pseudo=true;transl_table=11 PYKB01000120.1 Genbank gene 497 991 . + . ID=gene-C9F09_01385;Name=C9F09_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01385 PYKB01000120.1 Protein Homology CDS 497 991 . + 0 ID=cds-TGD05042.1;Parent=gene-C9F09_01385;Dbxref=NCBI_GP:TGD05042.1;Name=TGD05042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001582927.1;locus_tag=C9F09_01385;product=gluconokinase;protein_id=TGD05042.1;transl_table=11 PYKB01000120.1 Genbank gene 988 2328 . + . ID=gene-C9F09_01390;Name=C9F09_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01390 PYKB01000120.1 Protein Homology CDS 988 2328 . + 0 ID=cds-TGD05043.1;Parent=gene-C9F09_01390;Dbxref=NCBI_GP:TGD05043.1;Name=TGD05043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458378.1;locus_tag=C9F09_01390;product=gluconate transporter;protein_id=TGD05043.1;transl_table=11 PYKB01000120.1 Genbank pseudogene 2251 2624 . - . ID=gene-C9F09_01395;Name=C9F09_01395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01395;pseudo=true PYKB01000120.1 Protein Homology CDS 2251 2624 . - 0 ID=cds-C9F09_01395;Parent=gene-C9F09_01395;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_452851.1;locus_tag=C9F09_01395;product=MarC family protein;pseudo=true;transl_table=11 PYKB01000120.1 Genbank gene 2751 3857 . + . ID=gene-C9F09_01400;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=C9F09_01400 PYKB01000120.1 Protein Homology CDS 2751 3857 . + 0 ID=cds-TGD05044.1;Parent=gene-C9F09_01400;Dbxref=NCBI_GP:TGD05044.1;Name=TGD05044.1;gbkey=CDS;gene=asd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121607.1;locus_tag=C9F09_01400;product=aspartate-semialdehyde dehydrogenase;protein_id=TGD05044.1;transl_table=11 PYKB01000120.1 Genbank gene 4204 4661 . + . ID=gene-C9F09_01405;Name=C9F09_01405;end_range=4661,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01405;partial=true PYKB01000120.1 Protein Homology CDS 4204 4661 . + 0 ID=cds-TGD05045.1;Parent=gene-C9F09_01405;Dbxref=NCBI_GP:TGD05045.1;Name=TGD05045.1;end_range=4661,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458380.1;locus_tag=C9F09_01405;partial=true;product=1%2C4-alpha-glucan branching enzyme;protein_id=TGD05045.1;transl_table=11 ##sequence-region PYKB01001311.1 1 12553 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001311.1 Genbank region 1 12553 . + . ID=PYKB01001311.1:1..12553;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001311.1 Genbank gene 114 2174 . - . ID=gene-C9F09_22515;Name=C9F09_22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22515 PYKB01001311.1 Protein Homology CDS 114 2174 . - 0 ID=cds-TGC81357.1;Parent=gene-C9F09_22515;Dbxref=NCBI_GP:TGC81357.1;Name=TGC81357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=C9F09_22515;product=AsmA family protein;protein_id=TGC81357.1;transl_table=11 PYKB01001311.1 Genbank gene 2284 3051 . - . ID=gene-C9F09_22520;Name=C9F09_22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22520 PYKB01001311.1 Protein Homology CDS 2284 3051 . - 0 ID=cds-TGC81358.1;Parent=gene-C9F09_22520;Dbxref=NCBI_GP:TGC81358.1;Name=TGC81358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=C9F09_22520;product=cyclic-guanylate-specific phosphodiesterase;protein_id=TGC81358.1;transl_table=11 PYKB01001311.1 Genbank gene 3280 4209 . + . ID=gene-C9F09_22525;Name=C9F09_22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22525 PYKB01001311.1 Protein Homology CDS 3280 4209 . + 0 ID=cds-TGC81359.1;Parent=gene-C9F09_22525;Dbxref=NCBI_GP:TGC81359.1;Name=TGC81359.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=C9F09_22525;product=ketodeoxygluconokinase;protein_id=TGC81359.1;transl_table=11 PYKB01001311.1 Genbank gene 4263 5750 . - . ID=gene-C9F09_22530;Name=C9F09_22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22530 PYKB01001311.1 Protein Homology CDS 4263 5750 . - 0 ID=cds-TGC81360.1;Parent=gene-C9F09_22530;Dbxref=NCBI_GP:TGC81360.1;Name=TGC81360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=C9F09_22530;product=hypothetical protein;protein_id=TGC81360.1;transl_table=11 PYKB01001311.1 Genbank gene 5970 7256 . - . ID=gene-C9F09_22535;Name=C9F09_22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22535 PYKB01001311.1 Protein Homology CDS 5970 7256 . - 0 ID=cds-TGC81361.1;Parent=gene-C9F09_22535;Dbxref=NCBI_GP:TGC81361.1;Name=TGC81361.1;Note=involved in the transport of C4-dicarboxylates across the membrane;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=C9F09_22535;product=C4-dicarboxylate ABC transporter;protein_id=TGC81361.1;transl_table=11 PYKB01001311.1 Genbank gene 7414 9420 . - . ID=gene-C9F09_22540;Name=C9F09_22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22540 PYKB01001311.1 Protein Homology CDS 7414 9420 . - 0 ID=cds-TGC81362.1;Parent=gene-C9F09_22540;Dbxref=NCBI_GP:TGC81362.1;Name=TGC81362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=C9F09_22540;product=biofilm formation regulator HmsP;protein_id=TGC81362.1;transl_table=11 PYKB01001311.1 Genbank gene 9399 9590 . - . ID=gene-C9F09_22545;Name=C9F09_22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22545 PYKB01001311.1 Protein Homology CDS 9399 9590 . - 0 ID=cds-TGC81363.1;Parent=gene-C9F09_22545;Dbxref=NCBI_GP:TGC81363.1;Name=TGC81363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219335.1;locus_tag=C9F09_22545;product=hypothetical protein;protein_id=TGC81363.1;transl_table=11 PYKB01001311.1 Genbank pseudogene 9594 12488 . - . ID=gene-C9F09_22550;Name=C9F09_22550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22550;pseudo=true PYKB01001311.1 Protein Homology CDS 9594 12488 . - 0 ID=cds-C9F09_22550;Parent=gene-C9F09_22550;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=C9F09_22550;product=cellulose biosynthesis protein BcsC;pseudo=true;transl_table=11 ##sequence-region PYKB01001136.1 1 4635 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001136.1 Genbank region 1 4635 . + . ID=PYKB01001136.1:1..4635;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001136.1 Genbank gene 1 644 . + . ID=gene-C9F09_19195;Name=C9F09_19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19195;partial=true;start_range=.,1 PYKB01001136.1 Protein Homology CDS 1 644 . + 2 ID=cds-TGC84997.1;Parent=gene-C9F09_19195;Dbxref=NCBI_GP:TGC84997.1;Name=TGC84997.1;Note=may be involved in resistance to puromycin%2C acriflavine and tetraphenylarsonium chloride;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456731.1;locus_tag=C9F09_19195;partial=true;product=multidrug resistance outer membrane protein MdtQ;protein_id=TGC84997.1;start_range=.,1;transl_table=11 PYKB01001136.1 Genbank gene 710 1471 . + . ID=gene-C9F09_19200;Name=C9F09_19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19200 PYKB01001136.1 Protein Homology CDS 710 1471 . + 0 ID=cds-TGC84998.1;Parent=gene-C9F09_19200;Dbxref=NCBI_GP:TGC84998.1;Name=TGC84998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=C9F09_19200;product=SDR family oxidoreductase;protein_id=TGC84998.1;transl_table=11 PYKB01001136.1 Genbank gene 1519 2115 . - . ID=gene-C9F09_19205;Name=C9F09_19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19205 PYKB01001136.1 Protein Homology CDS 1519 2115 . - 0 ID=cds-TGC84999.1;Parent=gene-C9F09_19205;Dbxref=NCBI_GP:TGC84999.1;Name=TGC84999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456729.1;locus_tag=C9F09_19205;product=DedA family protein;protein_id=TGC84999.1;transl_table=11 PYKB01001136.1 Genbank gene 2247 2834 . + . ID=gene-C9F09_19210;Name=C9F09_19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19210 PYKB01001136.1 Protein Homology CDS 2247 2834 . + 0 ID=cds-TGC85000.1;Parent=gene-C9F09_19210;Dbxref=NCBI_GP:TGC85000.1;Name=TGC85000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456728.1;locus_tag=C9F09_19210;product=YIP1 family protein;protein_id=TGC85000.1;transl_table=11 PYKB01001136.1 Genbank gene 2834 3109 . + . ID=gene-C9F09_19215;Name=C9F09_19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19215 PYKB01001136.1 Protein Homology CDS 2834 3109 . + 0 ID=cds-TGC85001.1;Parent=gene-C9F09_19215;Dbxref=NCBI_GP:TGC85001.1;Name=TGC85001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344104.1;locus_tag=C9F09_19215;product=hypothetical protein;protein_id=TGC85001.1;transl_table=11 PYKB01001136.1 Genbank gene 3000 3947 . + . ID=gene-C9F09_19220;Name=C9F09_19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19220 PYKB01001136.1 Protein Homology CDS 3000 3947 . + 0 ID=cds-TGC85002.1;Parent=gene-C9F09_19220;Dbxref=NCBI_GP:TGC85002.1;Name=TGC85002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=C9F09_19220;product=D-alanyl-D-alanine endopeptidase;protein_id=TGC85002.1;transl_table=11 PYKB01001136.1 Genbank gene 4006 4635 . - . ID=gene-C9F09_19225;Name=C9F09_19225;end_range=4635,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19225;partial=true PYKB01001136.1 Protein Homology CDS 4006 4635 . - 0 ID=cds-TGC85003.1;Parent=gene-C9F09_19225;Dbxref=NCBI_GP:TGC85003.1;Name=TGC85003.1;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent;end_range=4635,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456727.1;locus_tag=C9F09_19225;partial=true;product=D-lactate dehydrogenase;protein_id=TGC85003.1;transl_table=11 ##sequence-region PYKB01000586.1 1 4604 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000586.1 Genbank region 1 4604 . + . ID=PYKB01000586.1:1..4604;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000586.1 Genbank gene 1 325 . - . ID=gene-C9F09_08450;Name=C9F09_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08450;partial=true;start_range=.,1 PYKB01000586.1 Protein Homology CDS 1 325 . - 0 ID=cds-TGC95673.1;Parent=gene-C9F09_08450;Dbxref=NCBI_GP:TGC95673.1;Name=TGC95673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457944.1;locus_tag=C9F09_08450;partial=true;product=glycerol dehydrogenase;protein_id=TGC95673.1;start_range=.,1;transl_table=11 PYKB01000586.1 Genbank pseudogene 337 999 . - . ID=gene-C9F09_08455;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=pseudogene;locus_tag=C9F09_08455;pseudo=true PYKB01000586.1 Protein Homology CDS 337 999 . - 0 ID=cds-C9F09_08455;Parent=gene-C9F09_08455;Note=internal stop;gbkey=CDS;gene=fsa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=C9F09_08455;product=fructose-6-phosphate aldolase;pseudo=true;transl_table=11 PYKB01000586.1 Genbank gene 1010 3511 . - . ID=gene-C9F09_08460;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=C9F09_08460 PYKB01000586.1 Protein Homology CDS 1010 3511 . - 0 ID=cds-TGC95674.1;Parent=gene-C9F09_08460;Dbxref=NCBI_GP:TGC95674.1;Name=TGC95674.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462991.1;locus_tag=C9F09_08460;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=TGC95674.1;transl_table=11 PYKB01000586.1 Genbank gene 3821 4604 . + . ID=gene-C9F09_08465;Name=C9F09_08465;end_range=4604,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08465;partial=true PYKB01000586.1 Protein Homology CDS 3821 4604 . + 0 ID=cds-TGC95675.1;Parent=gene-C9F09_08465;Dbxref=NCBI_GP:TGC95675.1;Name=TGC95675.1;end_range=4604,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462992.1;locus_tag=C9F09_08465;partial=true;product=PTS fructose-like transporter subunit EIIC;protein_id=TGC95675.1;transl_table=11 ##sequence-region PYKB01000429.1 1 4597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000429.1 Genbank region 1 4597 . + . ID=PYKB01000429.1:1..4597;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000429.1 Genbank gene 1 294 . - . ID=gene-C9F09_05070;Name=C9F09_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05070;partial=true;start_range=.,1 PYKB01000429.1 Protein Homology CDS 1 294 . - 0 ID=cds-TGC99061.1;Parent=gene-C9F09_05070;Dbxref=NCBI_GP:TGC99061.1;Name=TGC99061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455377.1;locus_tag=C9F09_05070;partial=true;product=hypothetical protein;protein_id=TGC99061.1;start_range=.,1;transl_table=11 PYKB01000429.1 Genbank gene 300 1199 . - . ID=gene-C9F09_05075;Name=C9F09_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05075 PYKB01000429.1 Protein Homology CDS 300 1199 . - 0 ID=cds-TGC99062.1;Parent=gene-C9F09_05075;Dbxref=NCBI_GP:TGC99062.1;Name=TGC99062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455378.1;locus_tag=C9F09_05075;product=glycyl-radical enzyme activating protein;protein_id=TGC99062.1;transl_table=11 PYKB01000429.1 Genbank gene 1477 2226 . - . ID=gene-C9F09_05080;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=C9F09_05080 PYKB01000429.1 Protein Homology CDS 1477 2226 . - 0 ID=cds-TGC99063.1;Parent=gene-C9F09_05080;Dbxref=NCBI_GP:TGC99063.1;Name=TGC99063.1;gbkey=CDS;gene=moeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=C9F09_05080;product=molybdopterin-synthase adenylyltransferase;protein_id=TGC99063.1;transl_table=11 PYKB01000429.1 Genbank gene 2226 3461 . - . ID=gene-C9F09_05085;Name=C9F09_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05085 PYKB01000429.1 Protein Homology CDS 2226 3461 . - 0 ID=cds-TGC99064.1;Parent=gene-C9F09_05085;Dbxref=NCBI_GP:TGC99064.1;Name=TGC99064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=C9F09_05085;product=molybdopterin molybdotransferase;protein_id=TGC99064.1;transl_table=11 PYKB01000429.1 Genbank gene 3665 4597 . + . ID=gene-C9F09_05090;Name=C9F09_05090;end_range=4597,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05090;partial=true PYKB01000429.1 Protein Homology CDS 3665 4597 . + 0 ID=cds-TGC99065.1;Parent=gene-C9F09_05090;Dbxref=NCBI_GP:TGC99065.1;Name=TGC99065.1;end_range=4597,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455381.1;locus_tag=C9F09_05090;partial=true;product=beta-aspartyl-peptidase;protein_id=TGC99065.1;transl_table=11 ##sequence-region PYKB01000699.1 1 4587 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000699.1 Genbank region 1 4587 . + . ID=PYKB01000699.1:1..4587;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000699.1 Genbank gene 1 742 . + . ID=gene-C9F09_10625;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=C9F09_10625;partial=true;start_range=.,1 PYKB01000699.1 Protein Homology CDS 1 742 . + 1 ID=cds-TGC93722.1;Parent=gene-C9F09_10625;Dbxref=NCBI_GP:TGC93722.1;Name=TGC93722.1;gbkey=CDS;gene=purM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=C9F09_10625;partial=true;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=TGC93722.1;start_range=.,1;transl_table=11 PYKB01000699.1 Genbank gene 742 1380 . + . ID=gene-C9F09_10630;Name=C9F09_10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10630 PYKB01000699.1 Protein Homology CDS 742 1380 . + 0 ID=cds-TGC93723.1;Parent=gene-C9F09_10630;Dbxref=NCBI_GP:TGC93723.1;Name=TGC93723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=C9F09_10630;product=phosphoribosylglycinamide formyltransferase;protein_id=TGC93723.1;transl_table=11 PYKB01000699.1 Genbank gene 1569 3635 . + . ID=gene-C9F09_10635;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=C9F09_10635 PYKB01000699.1 Protein Homology CDS 1569 3635 . + 0 ID=cds-TGC93724.1;Parent=gene-C9F09_10635;Dbxref=NCBI_GP:TGC93724.1;Name=TGC93724.1;gbkey=CDS;gene=ppk1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=C9F09_10635;product=polyphosphate kinase 1;protein_id=TGC93724.1;transl_table=11 PYKB01000699.1 Genbank gene 3640 4587 . + . ID=gene-C9F09_10640;Name=ppx;end_range=4587,.;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=C9F09_10640;partial=true PYKB01000699.1 Protein Homology CDS 3640 4587 . + 0 ID=cds-TGC93725.1;Parent=gene-C9F09_10640;Dbxref=NCBI_GP:TGC93725.1;Name=TGC93725.1;end_range=4587,.;gbkey=CDS;gene=ppx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457037.1;locus_tag=C9F09_10640;partial=true;product=exopolyphosphatase;protein_id=TGC93725.1;transl_table=11 ##sequence-region PYKB01001004.1 1 4585 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001004.1 Genbank region 1 4585 . + . ID=PYKB01001004.1:1..4585;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001004.1 Genbank gene 1 1522 . - . ID=gene-C9F09_16760;Name=C9F09_16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16760;partial=true;start_range=.,1 PYKB01001004.1 Protein Homology CDS 1 1522 . - 0 ID=cds-TGC88176.1;Parent=gene-C9F09_16760;Dbxref=NCBI_GP:TGC88176.1;Name=TGC88176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=C9F09_16760;partial=true;product=dihydroxy-acid dehydratase;protein_id=TGC88176.1;start_range=.,1;transl_table=11 PYKB01001004.1 Genbank gene 1682 2611 . - . ID=gene-C9F09_16765;Name=C9F09_16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16765 PYKB01001004.1 Protein Homology CDS 1682 2611 . - 0 ID=cds-TGC88177.1;Parent=gene-C9F09_16765;Dbxref=NCBI_GP:TGC88177.1;Name=TGC88177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457845.1;locus_tag=C9F09_16765;product=branched chain amino acid aminotransferase;protein_id=TGC88177.1;transl_table=11 PYKB01001004.1 Genbank gene 2629 2892 . - . ID=gene-C9F09_16770;Name=C9F09_16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16770 PYKB01001004.1 Protein Homology CDS 2629 2892 . - 0 ID=cds-TGC88178.1;Parent=gene-C9F09_16770;Dbxref=NCBI_GP:TGC88178.1;Name=TGC88178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457846.1;locus_tag=C9F09_16770;product=acetolactate synthase 2 small subunit;protein_id=TGC88178.1;transl_table=11 PYKB01001004.1 Genbank gene 2841 4535 . - . ID=gene-C9F09_16775;Name=C9F09_16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16775 PYKB01001004.1 Protein Homology CDS 2841 4535 . - 0 ID=cds-TGC88179.1;Parent=gene-C9F09_16775;Dbxref=NCBI_GP:TGC88179.1;Name=TGC88179.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=C9F09_16775;product=acetolactate synthase 2 catalytic subunit;protein_id=TGC88179.1;transl_table=11 ##sequence-region PYKB01000362.1 1 4580 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000362.1 Genbank region 1 4580 . + . ID=PYKB01000362.1:1..4580;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000362.1 Genbank gene 1 264 . - . ID=gene-C9F09_04090;Name=C9F09_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04090;partial=true;start_range=.,1 PYKB01000362.1 Protein Homology CDS 1 264 . - 0 ID=cds-TGD00262.1;Parent=gene-C9F09_04090;Dbxref=NCBI_GP:TGD00262.1;Name=TGD00262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=C9F09_04090;partial=true;product=class II fumarate hydratase;protein_id=TGD00262.1;start_range=.,1;transl_table=11 PYKB01000362.1 Genbank gene 432 2078 . - . ID=gene-C9F09_04095;Name=C9F09_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04095 PYKB01000362.1 Protein Homology CDS 432 2078 . - 0 ID=cds-TGD00263.1;Parent=gene-C9F09_04095;Dbxref=NCBI_GP:TGD00263.1;Name=TGD00263.1;Note=catalyzes the formation of malate from fumerate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=C9F09_04095;product=fumarate hydratase;protein_id=TGD00263.1;transl_table=11 PYKB01000362.1 Genbank gene 2278 3453 . + . ID=gene-C9F09_04100;Name=C9F09_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04100 PYKB01000362.1 Protein Homology CDS 2278 3453 . + 0 ID=cds-TGD00264.1;Parent=gene-C9F09_04100;Dbxref=NCBI_GP:TGD00264.1;Name=TGD00264.1;Note=catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456065.1;locus_tag=C9F09_04100;product=mannose-6-phosphate isomerase;protein_id=TGD00264.1;transl_table=11 PYKB01000362.1 Genbank gene 3556 4580 . + . ID=gene-C9F09_04105;Name=C9F09_04105;end_range=4580,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04105;partial=true PYKB01000362.1 Protein Homology CDS 3556 4580 . + 0 ID=cds-TGD00265.1;Parent=gene-C9F09_04105;Dbxref=NCBI_GP:TGD00265.1;Name=TGD00265.1;end_range=4580,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456066.1;locus_tag=C9F09_04105;partial=true;product=hypothetical protein;protein_id=TGD00265.1;transl_table=11 ##sequence-region PYKB01001203.1 1 4577 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001203.1 Genbank region 1 4577 . + . ID=PYKB01001203.1:1..4577;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001203.1 Genbank gene 1 476 . - . ID=gene-C9F09_20470;Name=C9F09_20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20470;partial=true;start_range=.,1 PYKB01001203.1 Protein Homology CDS 1 476 . - 0 ID=cds-TGC83468.1;Parent=gene-C9F09_20470;Dbxref=NCBI_GP:TGC83468.1;Name=TGC83468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=C9F09_20470;partial=true;product=inorganic triphosphatase;protein_id=TGC83468.1;start_range=.,1;transl_table=11 PYKB01001203.1 Genbank gene 494 619 . - . ID=gene-C9F09_20475;Name=C9F09_20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20475 PYKB01001203.1 Protein Homology CDS 494 619 . - 0 ID=cds-TGC83474.1;Parent=gene-C9F09_20475;Dbxref=NCBI_GP:TGC83474.1;Name=TGC83474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296427.1;locus_tag=C9F09_20475;product=hypothetical protein;protein_id=TGC83474.1;transl_table=11 PYKB01001203.1 Genbank gene 718 1332 . + . ID=gene-C9F09_20480;Name=C9F09_20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20480 PYKB01001203.1 Protein Homology CDS 718 1332 . + 0 ID=cds-TGC83469.1;Parent=gene-C9F09_20480;Dbxref=NCBI_GP:TGC83469.1;Name=TGC83469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457594.1;locus_tag=C9F09_20480;product=SH3 domain-containing protein;protein_id=TGC83469.1;transl_table=11 PYKB01001203.1 Genbank gene 1395 2636 . + . ID=gene-C9F09_20485;Name=C9F09_20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20485 PYKB01001203.1 Protein Homology CDS 1395 2636 . + 0 ID=cds-TGC83470.1;Parent=gene-C9F09_20485;Dbxref=NCBI_GP:TGC83470.1;Name=TGC83470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=C9F09_20485;product=multifunctional CCA addition/repair protein;protein_id=TGC83470.1;transl_table=11 PYKB01001203.1 Genbank gene 2740 3561 . - . ID=gene-C9F09_20490;Name=C9F09_20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20490 PYKB01001203.1 Protein Homology CDS 2740 3561 . - 0 ID=cds-TGC83471.1;Parent=gene-C9F09_20490;Dbxref=NCBI_GP:TGC83471.1;Name=TGC83471.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457596.1;locus_tag=C9F09_20490;product=undecaprenyl-diphosphatase;protein_id=TGC83471.1;transl_table=11 PYKB01001203.1 Genbank gene 3659 4018 . - . ID=gene-C9F09_20495;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=C9F09_20495 PYKB01001203.1 Protein Homology CDS 3659 4018 . - 0 ID=cds-TGC83472.1;Parent=gene-C9F09_20495;Dbxref=NCBI_GP:TGC83472.1;Name=TGC83472.1;Note=catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin;gbkey=CDS;gene=folB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417530.2;locus_tag=C9F09_20495;product=dihydroneopterin aldolase;protein_id=TGC83472.1;transl_table=11 PYKB01001203.1 Genbank gene 4125 4577 . + . ID=gene-C9F09_20500;Name=C9F09_20500;end_range=4577,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20500;partial=true PYKB01001203.1 Protein Homology CDS 4125 4577 . + 0 ID=cds-TGC83473.1;Parent=gene-C9F09_20500;Dbxref=NCBI_GP:TGC83473.1;Name=TGC83473.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;end_range=4577,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457598.1;locus_tag=C9F09_20500;partial=true;product=acyl-phosphate--glycerol-3-phosphate O-acyltransferase;protein_id=TGC83473.1;transl_table=11 ##sequence-region PYKB01001472.1 1 4570 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001472.1 Genbank region 1 4570 . + . ID=PYKB01001472.1:1..4570;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001472.1 Genbank gene 1 200 . - . ID=gene-C9F09_25615;Name=C9F09_25615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25615;partial=true;start_range=.,1 PYKB01001472.1 Protein Homology CDS 1 200 . - 0 ID=cds-TGC77770.1;Parent=gene-C9F09_25615;Dbxref=NCBI_GP:TGC77770.1;Name=TGC77770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=C9F09_25615;partial=true;product=aspartate racemase;protein_id=TGC77770.1;start_range=.,1;transl_table=11 PYKB01001472.1 Genbank gene 192 383 . + . ID=gene-C9F09_25620;Name=C9F09_25620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25620 PYKB01001472.1 Protein Homology CDS 192 383 . + 0 ID=cds-TGC77764.1;Parent=gene-C9F09_25620;Dbxref=NCBI_GP:TGC77764.1;Name=TGC77764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523645.1;locus_tag=C9F09_25620;product=hypothetical protein;protein_id=TGC77764.1;transl_table=11 PYKB01001472.1 Genbank gene 439 969 . - . ID=gene-C9F09_25625;Name=C9F09_25625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25625 PYKB01001472.1 Protein Homology CDS 439 969 . - 0 ID=cds-TGC77765.1;Parent=gene-C9F09_25625;Dbxref=NCBI_GP:TGC77765.1;Name=TGC77765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=C9F09_25625;product=cytoplasmic protein;protein_id=TGC77765.1;transl_table=11 PYKB01001472.1 Genbank gene 1687 2700 . + . ID=gene-C9F09_25630;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=C9F09_25630 PYKB01001472.1 Protein Homology CDS 1687 2700 . + 0 ID=cds-TGC77766.1;Parent=gene-C9F09_25630;Dbxref=NCBI_GP:TGC77766.1;Name=TGC77766.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458932.1;locus_tag=C9F09_25630;product=tryptophan--tRNA ligase;protein_id=TGC77766.1;transl_table=11 PYKB01001472.1 Genbank gene 2701 3474 . - . ID=gene-C9F09_25635;Name=C9F09_25635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25635 PYKB01001472.1 Protein Homology CDS 2701 3474 . - 0 ID=cds-TGC77767.1;Parent=gene-C9F09_25635;Dbxref=NCBI_GP:TGC77767.1;Name=TGC77767.1;Note=regulates the expression of uxuBA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=C9F09_25635;product=GntR family transcriptional regulator;protein_id=TGC77767.1;transl_table=11 PYKB01001472.1 Genbank gene 3509 3721 . - . ID=gene-C9F09_25640;Name=C9F09_25640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25640 PYKB01001472.1 Protein Homology CDS 3509 3721 . - 0 ID=cds-TGC77768.1;Parent=gene-C9F09_25640;Dbxref=NCBI_GP:TGC77768.1;Name=TGC77768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219569.1;locus_tag=C9F09_25640;product=hypothetical protein;protein_id=TGC77768.1;transl_table=11 PYKB01001472.1 Genbank gene 3824 4498 . + . ID=gene-C9F09_25645;Name=C9F09_25645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25645 PYKB01001472.1 Protein Homology CDS 3824 4498 . + 0 ID=cds-TGC77769.1;Parent=gene-C9F09_25645;Dbxref=NCBI_GP:TGC77769.1;Name=TGC77769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463365.1;locus_tag=C9F09_25645;product=dienelactone hydrolase;protein_id=TGC77769.1;transl_table=11 ##sequence-region PYKB01001064.1 1 4570 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001064.1 Genbank region 1 4570 . + . ID=PYKB01001064.1:1..4570;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001064.1 Genbank gene 1 633 . + . ID=gene-C9F09_17815;Name=C9F09_17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17815;partial=true;start_range=.,1 PYKB01001064.1 Protein Homology CDS 1 633 . + 0 ID=cds-TGC86852.1;Parent=gene-C9F09_17815;Dbxref=NCBI_GP:TGC86852.1;Name=TGC86852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=C9F09_17815;partial=true;product=diaminopimelate decarboxylase;protein_id=TGC86852.1;start_range=.,1;transl_table=11 PYKB01001064.1 Genbank gene 724 2145 . + . ID=gene-C9F09_17820;Name=C9F09_17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17820 PYKB01001064.1 Protein Homology CDS 724 2145 . + 0 ID=cds-TGC86853.1;Parent=gene-C9F09_17820;Dbxref=NCBI_GP:TGC86853.1;Name=TGC86853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=C9F09_17820;product=amino acid transporter;protein_id=TGC86853.1;transl_table=11 PYKB01001064.1 Genbank gene 2147 3250 . + . ID=gene-C9F09_17825;Name=C9F09_17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17825 PYKB01001064.1 Protein Homology CDS 2147 3250 . + 0 ID=cds-TGC86854.1;Parent=gene-C9F09_17825;Dbxref=NCBI_GP:TGC86854.1;Name=TGC86854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=C9F09_17825;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=TGC86854.1;transl_table=11 PYKB01001064.1 Genbank pseudogene 3314 4501 . + . ID=gene-C9F09_17830;Name=C9F09_17830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17830;pseudo=true PYKB01001064.1 Protein Homology CDS 3314 4501 . + 0 ID=cds-C9F09_17830;Parent=gene-C9F09_17830;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456899.1;locus_tag=C9F09_17830;product=amino acid permease;pseudo=true;transl_table=11 ##sequence-region PYKB01001139.1 1 4554 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001139.1 Genbank region 1 4554 . + . ID=PYKB01001139.1:1..4554;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001139.1 Genbank gene 1 352 . + . ID=gene-C9F09_19255;Name=C9F09_19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19255;partial=true;start_range=.,1 PYKB01001139.1 Protein Homology CDS 1 352 . + 1 ID=cds-TGC84929.1;Parent=gene-C9F09_19255;Dbxref=NCBI_GP:TGC84929.1;Name=TGC84929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=C9F09_19255;partial=true;product=metal-dependent hydrolase;protein_id=TGC84929.1;start_range=.,1;transl_table=11 PYKB01001139.1 Genbank gene 385 1248 . - . ID=gene-C9F09_19260;Name=yjjW;gbkey=Gene;gene=yjjW;gene_biotype=protein_coding;locus_tag=C9F09_19260 PYKB01001139.1 Protein Homology CDS 385 1248 . - 0 ID=cds-TGC84930.1;Parent=gene-C9F09_19260;Dbxref=NCBI_GP:TGC84930.1;Name=TGC84930.1;gbkey=CDS;gene=yjjW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=C9F09_19260;product=YjjW family glycine radical enzyme activase;protein_id=TGC84930.1;transl_table=11 PYKB01001139.1 Genbank gene 1220 2770 . - . ID=gene-C9F09_19265;Name=C9F09_19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19265 PYKB01001139.1 Protein Homology CDS 1220 2770 . - 0 ID=cds-TGC84931.1;Parent=gene-C9F09_19265;Dbxref=NCBI_GP:TGC84931.1;Name=TGC84931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458978.1;locus_tag=C9F09_19265;product=YjjI family glycine radical enzyme;protein_id=TGC84931.1;transl_table=11 PYKB01001139.1 Genbank gene 3012 3809 . + . ID=gene-C9F09_19270;Name=C9F09_19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19270 PYKB01001139.1 Protein Homology CDS 3012 3809 . + 0 ID=cds-TGC84932.1;Parent=gene-C9F09_19270;Dbxref=NCBI_GP:TGC84932.1;Name=TGC84932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463423.1;locus_tag=C9F09_19270;product=deoxyribose-phosphate aldolase;protein_id=TGC84932.1;transl_table=11 PYKB01001139.1 Genbank gene 3933 4554 . + . ID=gene-C9F09_19275;Name=C9F09_19275;end_range=4554,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19275;partial=true PYKB01001139.1 Protein Homology CDS 3933 4554 . + 0 ID=cds-TGC84933.1;Parent=gene-C9F09_19275;Dbxref=NCBI_GP:TGC84933.1;Name=TGC84933.1;end_range=4554,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458980.1;locus_tag=C9F09_19275;partial=true;product=thymidine phosphorylase;protein_id=TGC84933.1;transl_table=11 ##sequence-region PYKB01000065.1 1 12359 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000065.1 Genbank region 1 12359 . + . ID=PYKB01000065.1:1..12359;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000065.1 Genbank pseudogene 21 350 . - . ID=gene-C9F09_00735;Name=C9F09_00735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00735;pseudo=true PYKB01000065.1 Protein Homology CDS 21 350 . - 0 ID=cds-C9F09_00735;Parent=gene-C9F09_00735;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458212.1;locus_tag=C9F09_00735;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;pseudo=true;transl_table=11 PYKB01000065.1 Genbank gene 500 1198 . - . ID=gene-C9F09_00740;Name=C9F09_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00740 PYKB01000065.1 Protein Homology CDS 500 1198 . - 0 ID=cds-TGD06137.1;Parent=gene-C9F09_00740;Dbxref=NCBI_GP:TGD06137.1;Name=TGD06137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=C9F09_00740;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=TGD06137.1;transl_table=11 PYKB01000065.1 Genbank gene 1221 2234 . - . ID=gene-C9F09_00745;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=C9F09_00745 PYKB01000065.1 Protein Homology CDS 1221 2234 . - 0 ID=cds-TGD06138.1;Parent=gene-C9F09_00745;Dbxref=NCBI_GP:TGD06138.1;Name=TGD06138.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=C9F09_00745;product=lipopolysaccharide glucosyltransferase RfaJ;protein_id=TGD06138.1;transl_table=11 PYKB01000065.1 Genbank gene 2252 3265 . - . ID=gene-C9F09_00750;Name=C9F09_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00750 PYKB01000065.1 Protein Homology CDS 2252 3265 . - 0 ID=cds-TGD06139.1;Parent=gene-C9F09_00750;Dbxref=NCBI_GP:TGD06139.1;Name=TGD06139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=C9F09_00750;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=TGD06139.1;transl_table=11 PYKB01000065.1 Genbank gene 3271 4350 . - . ID=gene-C9F09_00755;Name=C9F09_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00755 PYKB01000065.1 Protein Homology CDS 3271 4350 . - 0 ID=cds-TGD06140.1;Parent=gene-C9F09_00755;Dbxref=NCBI_GP:TGD06140.1;Name=TGD06140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=C9F09_00755;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=TGD06140.1;transl_table=11 PYKB01000065.1 Genbank pseudogene 4364 4468 . - . ID=gene-C9F09_00760;Name=C9F09_00760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00760;pseudo=true PYKB01000065.1 Protein Homology CDS 4364 4468 . - 0 ID=cds-C9F09_00760;Parent=gene-C9F09_00760;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000972582.1;locus_tag=C9F09_00760;product=lipopolysaccharide 1%2C3-galactosyltransferase;pseudo=true;transl_table=11 PYKB01000065.1 Genbank pseudogene 4471 4629 . - . ID=gene-C9F09_00765;Name=C9F09_00765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00765;pseudo=true PYKB01000065.1 Protein Homology CDS 4471 4629 . - 0 ID=cds-C9F09_00765;Parent=gene-C9F09_00765;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280096.1;locus_tag=C9F09_00765;product=lipopolysaccharide 1%2C3-galactosyltransferase;pseudo=true;transl_table=11 PYKB01000065.1 Genbank gene 4685 5482 . - . ID=gene-C9F09_00770;Name=C9F09_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00770 PYKB01000065.1 Protein Homology CDS 4685 5482 . - 0 ID=cds-TGD06141.1;Parent=gene-C9F09_00770;Dbxref=NCBI_GP:TGD06141.1;Name=TGD06141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=C9F09_00770;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=TGD06141.1;transl_table=11 PYKB01000065.1 Genbank gene 5475 6599 . - . ID=gene-C9F09_00775;Name=C9F09_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00775 PYKB01000065.1 Protein Homology CDS 5475 6599 . - 0 ID=cds-TGD06142.1;Parent=gene-C9F09_00775;Dbxref=NCBI_GP:TGD06142.1;Name=TGD06142.1;Note=catalyzes the addition of the first glucose residue to the LPS core;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=C9F09_00775;product=glucosyltransferase I RfaG;protein_id=TGD06142.1;transl_table=11 PYKB01000065.1 Genbank gene 6596 7666 . - . ID=gene-C9F09_00780;Name=C9F09_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00780 PYKB01000065.1 Protein Homology CDS 6596 7666 . - 0 ID=cds-TGD06143.1;Parent=gene-C9F09_00780;Dbxref=NCBI_GP:TGD06143.1;Name=TGD06143.1;Note=catalyzes the transfer of heptose(III) to heptose(II) in the lipopolysaccharide inner core;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=C9F09_00780;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=TGD06143.1;transl_table=11 PYKB01000065.1 Genbank gene 8075 9352 . + . ID=gene-C9F09_00785;Name=C9F09_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00785 PYKB01000065.1 Protein Homology CDS 8075 9352 . + 0 ID=cds-TGD06144.1;Parent=gene-C9F09_00785;Dbxref=NCBI_GP:TGD06144.1;Name=TGD06144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458202.1;locus_tag=C9F09_00785;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=TGD06144.1;transl_table=11 PYKB01000065.1 Genbank gene 9361 9840 . + . ID=gene-C9F09_00790;Name=C9F09_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00790 PYKB01000065.1 Protein Homology CDS 9361 9840 . + 0 ID=cds-TGD06145.1;Parent=gene-C9F09_00790;Dbxref=NCBI_GP:TGD06145.1;Name=TGD06145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458201.1;locus_tag=C9F09_00790;product=phosphopantetheine adenylyltransferase;protein_id=TGD06145.1;transl_table=11 PYKB01000065.1 Genbank gene 9867 10676 . - . ID=gene-C9F09_00795;Name=C9F09_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00795 PYKB01000065.1 Protein Homology CDS 9867 10676 . - 0 ID=cds-TGD06146.1;Parent=gene-C9F09_00795;Dbxref=NCBI_GP:TGD06146.1;Name=TGD06146.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=C9F09_00795;product=formamidopyrimidine-DNA glycosylase;protein_id=TGD06146.1;transl_table=11 PYKB01000065.1 Genbank gene 10774 10941 . - . ID=gene-C9F09_00800;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=C9F09_00800 PYKB01000065.1 Protein Homology CDS 10774 10941 . - 0 ID=cds-TGD06147.1;Parent=gene-C9F09_00800;Dbxref=NCBI_GP:TGD06147.1;Name=TGD06147.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=C9F09_00800;product=50S ribosomal protein L33;protein_id=TGD06147.1;transl_table=11 PYKB01000065.1 Genbank gene 10962 11198 . - . ID=gene-C9F09_00805;Name=C9F09_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00805 PYKB01000065.1 Protein Homology CDS 10962 11198 . - 0 ID=cds-TGD06148.1;Parent=gene-C9F09_00805;Dbxref=NCBI_GP:TGD06148.1;Name=TGD06148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=C9F09_00805;product=50S ribosomal protein L28;protein_id=TGD06148.1;transl_table=11 PYKB01000065.1 Genbank gene 11416 12081 . - . ID=gene-C9F09_00810;Name=C9F09_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00810 PYKB01000065.1 Protein Homology CDS 11416 12081 . - 0 ID=cds-TGD06149.1;Parent=gene-C9F09_00810;Dbxref=NCBI_GP:TGD06149.1;Name=TGD06149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458197.1;locus_tag=C9F09_00810;product=hypothetical protein;protein_id=TGD06149.1;transl_table=11 PYKB01000065.1 Genbank gene 12254 12359 . + . ID=gene-C9F09_00815;Name=C9F09_00815;end_range=12359,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00815;partial=true PYKB01000065.1 Protein Homology CDS 12254 12359 . + 0 ID=cds-TGD06150.1;Parent=gene-C9F09_00815;Dbxref=NCBI_GP:TGD06150.1;Name=TGD06150.1;end_range=12359,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458196.3;locus_tag=C9F09_00815;partial=true;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=TGD06150.1;transl_table=11 ##sequence-region PYKB01001028.1 1 4552 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001028.1 Genbank region 1 4552 . + . ID=PYKB01001028.1:1..4552;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001028.1 Genbank gene 1 827 . + . ID=gene-C9F09_17190;Name=C9F09_17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17190;partial=true;start_range=.,1 PYKB01001028.1 Protein Homology CDS 1 827 . + 2 ID=cds-TGC87641.1;Parent=gene-C9F09_17190;Dbxref=NCBI_GP:TGC87641.1;Name=TGC87641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=C9F09_17190;partial=true;product=DUF1615 domain-containing protein;protein_id=TGC87641.1;start_range=.,1;transl_table=11 PYKB01001028.1 Genbank gene 919 1173 . - . ID=gene-C9F09_17195;Name=C9F09_17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17195 PYKB01001028.1 Protein Homology CDS 919 1173 . - 0 ID=cds-TGC87642.1;Parent=gene-C9F09_17195;Dbxref=NCBI_GP:TGC87642.1;Name=TGC87642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454973.1;locus_tag=C9F09_17195;product=DUF2755 domain-containing protein;protein_id=TGC87642.1;transl_table=11 PYKB01001028.1 Genbank gene 1441 1656 . + . ID=gene-C9F09_17200;Name=C9F09_17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17200 PYKB01001028.1 Protein Homology CDS 1441 1656 . + 0 ID=cds-TGC87643.1;Parent=gene-C9F09_17200;Dbxref=NCBI_GP:TGC87643.1;Name=TGC87643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454974.1;locus_tag=C9F09_17200;product=DUF2754 domain-containing protein;protein_id=TGC87643.1;transl_table=11 PYKB01001028.1 Genbank gene 1682 2776 . - . ID=gene-C9F09_17205;Name=C9F09_17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17205 PYKB01001028.1 Protein Homology CDS 1682 2776 . - 0 ID=cds-TGC87644.1;Parent=gene-C9F09_17205;Dbxref=NCBI_GP:TGC87644.1;Name=TGC87644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454975.1;locus_tag=C9F09_17205;product=D-alanine--D-alanine ligase;protein_id=TGC87644.1;transl_table=11 PYKB01001028.1 Genbank gene 2854 3567 . + . ID=gene-C9F09_17210;Name=C9F09_17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17210 PYKB01001028.1 Protein Homology CDS 2854 3567 . + 0 ID=cds-TGC87645.1;Parent=gene-C9F09_17210;Dbxref=NCBI_GP:TGC87645.1;Name=TGC87645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=C9F09_17210;product=extensin;protein_id=TGC87645.1;transl_table=11 PYKB01001028.1 Genbank gene 3736 4552 . + . ID=gene-C9F09_17215;Name=C9F09_17215;end_range=4552,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17215;partial=true PYKB01001028.1 Protein Homology CDS 3736 4552 . + 0 ID=cds-TGC87646.1;Parent=gene-C9F09_17215;Dbxref=NCBI_GP:TGC87646.1;Name=TGC87646.1;Note=Confers resistance to fosfomycin and deoxycholate;end_range=4552,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=C9F09_17215;partial=true;product=multidrug transporter subunit MdtG;protein_id=TGC87646.1;transl_table=11 ##sequence-region PYKB01001053.1 1 4550 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001053.1 Genbank region 1 4550 . + . ID=PYKB01001053.1:1..4550;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001053.1 Genbank gene 1 506 . - . ID=gene-C9F09_17670;Name=C9F09_17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17670;partial=true;start_range=.,1 PYKB01001053.1 Protein Homology CDS 1 506 . - 0 ID=cds-TGC87061.1;Parent=gene-C9F09_17670;Dbxref=NCBI_GP:TGC87061.1;Name=TGC87061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457409.1;locus_tag=C9F09_17670;partial=true;product=LysR family transcriptional regulator;protein_id=TGC87061.1;start_range=.,1;transl_table=11 PYKB01001053.1 Genbank gene 624 1886 . + . ID=gene-C9F09_17675;Name=C9F09_17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17675 PYKB01001053.1 Protein Homology CDS 624 1886 . + 0 ID=cds-TGC87062.1;Parent=gene-C9F09_17675;Dbxref=NCBI_GP:TGC87062.1;Name=TGC87062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457408.1;locus_tag=C9F09_17675;product=diaminopimelate decarboxylase;protein_id=TGC87062.1;transl_table=11 PYKB01001053.1 Genbank gene 1896 2918 . - . ID=gene-C9F09_17680;Name=C9F09_17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17680 PYKB01001053.1 Protein Homology CDS 1896 2918 . - 0 ID=cds-TGC87063.1;Parent=gene-C9F09_17680;Dbxref=NCBI_GP:TGC87063.1;Name=TGC87063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=C9F09_17680;product=LacI family DNA-binding transcriptional regulator;protein_id=TGC87063.1;transl_table=11 PYKB01001053.1 Genbank gene 2929 3957 . - . ID=gene-C9F09_17685;Name=C9F09_17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17685 PYKB01001053.1 Protein Homology CDS 2929 3957 . - 0 ID=cds-TGC87064.1;Parent=gene-C9F09_17685;Dbxref=NCBI_GP:TGC87064.1;Name=TGC87064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=C9F09_17685;product=transcriptional regulator;protein_id=TGC87064.1;transl_table=11 ##sequence-region PYKB01001563.1 1 4546 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001563.1 Genbank region 1 4546 . + . ID=PYKB01001563.1:1..4546;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001563.1 Genbank gene 16 357 . + . ID=gene-C9F09_27270;Name=C9F09_27270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27270 PYKB01001563.1 Protein Homology CDS 16 357 . + 0 ID=cds-TGC75733.1;Parent=gene-C9F09_27270;Dbxref=NCBI_GP:TGC75733.1;Name=TGC75733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458720.1;locus_tag=C9F09_27270;product=hypothetical protein;protein_id=TGC75733.1;transl_table=11 PYKB01001563.1 Genbank gene 425 658 . + . ID=gene-C9F09_27275;Name=C9F09_27275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27275 PYKB01001563.1 Protein Homology CDS 425 658 . + 0 ID=cds-TGC75728.1;Parent=gene-C9F09_27275;Dbxref=NCBI_GP:TGC75728.1;Name=TGC75728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458719.1;locus_tag=C9F09_27275;product=DUF2732 domain-containing protein;protein_id=TGC75728.1;transl_table=11 PYKB01001563.1 Genbank gene 658 885 . + . ID=gene-C9F09_27280;Name=C9F09_27280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27280 PYKB01001563.1 Protein Homology CDS 658 885 . + 0 ID=cds-TGC75729.1;Parent=gene-C9F09_27280;Dbxref=NCBI_GP:TGC75729.1;Name=TGC75729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458718.1;locus_tag=C9F09_27280;product=hypothetical protein;protein_id=TGC75729.1;transl_table=11 PYKB01001563.1 Genbank gene 882 1466 . + . ID=gene-C9F09_27285;Name=C9F09_27285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27285 PYKB01001563.1 Protein Homology CDS 882 1466 . + 0 ID=cds-TGC75730.1;Parent=gene-C9F09_27285;Dbxref=NCBI_GP:TGC75730.1;Name=TGC75730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458717.1;locus_tag=C9F09_27285;product=3'-5' exonuclease;protein_id=TGC75730.1;transl_table=11 PYKB01001563.1 Genbank gene 1463 2320 . + . ID=gene-C9F09_27290;Name=C9F09_27290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27290 PYKB01001563.1 Protein Homology CDS 1463 2320 . + 0 ID=cds-TGC75731.1;Parent=gene-C9F09_27290;Dbxref=NCBI_GP:TGC75731.1;Name=TGC75731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835217.1;locus_tag=C9F09_27290;product=DNA adenine methylase;protein_id=TGC75731.1;transl_table=11 PYKB01001563.1 Genbank gene 2317 3315 . + . ID=gene-C9F09_27295;Name=C9F09_27295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27295 PYKB01001563.1 Protein Homology CDS 2317 3315 . + 0 ID=cds-TGC75732.1;Parent=gene-C9F09_27295;Dbxref=NCBI_GP:TGC75732.1;Name=TGC75732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835216.1;locus_tag=C9F09_27295;product=DNA cytosine methyltransferase;protein_id=TGC75732.1;transl_table=11 PYKB01001563.1 Genbank gene 3333 4546 . + . ID=gene-C9F09_27300;Name=C9F09_27300;end_range=4546,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27300;partial=true PYKB01001563.1 Protein Homology CDS 3333 4546 . + 0 ID=cds-TGC75734.1;Parent=gene-C9F09_27300;Dbxref=NCBI_GP:TGC75734.1;Name=TGC75734.1;end_range=4546,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036643.1;locus_tag=C9F09_27300;partial=true;product=endonuclease;protein_id=TGC75734.1;transl_table=11 ##sequence-region PYKB01001580.1 1 4535 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001580.1 Genbank region 1 4535 . + . ID=PYKB01001580.1:1..4535;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001580.1 Genbank gene 1 861 . - . ID=gene-C9F09_27780;Name=C9F09_27780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27780;partial=true;start_range=.,1 PYKB01001580.1 Protein Homology CDS 1 861 . - 0 ID=cds-TGC75204.1;Parent=gene-C9F09_27780;Dbxref=NCBI_GP:TGC75204.1;Name=TGC75204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457355.1;locus_tag=C9F09_27780;partial=true;product=glycerate kinase;protein_id=TGC75204.1;start_range=.,1;transl_table=11 PYKB01001580.1 Genbank gene 939 2279 . - . ID=gene-C9F09_27785;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=C9F09_27785 PYKB01001580.1 Protein Homology CDS 939 2279 . - 0 ID=cds-TGC75205.1;Parent=gene-C9F09_27785;Dbxref=NCBI_GP:TGC75205.1;Name=TGC75205.1;gbkey=CDS;gene=gudD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461881.1;locus_tag=C9F09_27785;product=glucarate dehydratase;protein_id=TGC75205.1;transl_table=11 PYKB01001580.1 Genbank gene 2300 3640 . - . ID=gene-C9F09_27790;Name=C9F09_27790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27790 PYKB01001580.1 Protein Homology CDS 2300 3640 . - 0 ID=cds-TGC75206.1;Parent=gene-C9F09_27790;Dbxref=NCBI_GP:TGC75206.1;Name=TGC75206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=C9F09_27790;product=glucarate dehydratase;protein_id=TGC75206.1;transl_table=11 PYKB01001580.1 Genbank gene 3637 4535 . - . ID=gene-C9F09_27795;Name=C9F09_27795;end_range=4535,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27795;partial=true PYKB01001580.1 Protein Homology CDS 3637 4535 . - 2 ID=cds-TGC75207.1;Parent=gene-C9F09_27795;Dbxref=NCBI_GP:TGC75207.1;Name=TGC75207.1;end_range=4535,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=C9F09_27795;partial=true;product=MFS transporter;protein_id=TGC75207.1;transl_table=11 ##sequence-region PYKB01000421.1 1 4531 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000421.1 Genbank region 1 4531 . + . ID=PYKB01000421.1:1..4531;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000421.1 Genbank gene 1 2200 . + . ID=gene-C9F09_04860;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=C9F09_04860;partial=true;start_range=.,1 PYKB01000421.1 Protein Homology CDS 1 2200 . + 1 ID=cds-TGC99214.1;Parent=gene-C9F09_04860;Dbxref=NCBI_GP:TGC99214.1;Name=TGC99214.1;gbkey=CDS;gene=treY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=C9F09_04860;partial=true;product=malto-oligosyltrehalose synthase;protein_id=TGC99214.1;start_range=.,1;transl_table=11 PYKB01000421.1 Genbank gene 2257 4332 . + . ID=gene-C9F09_04865;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=C9F09_04865 PYKB01000421.1 Protein Homology CDS 2257 4332 . + 0 ID=cds-TGC99215.1;Parent=gene-C9F09_04865;Dbxref=NCBI_GP:TGC99215.1;Name=TGC99215.1;gbkey=CDS;gene=glgX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=C9F09_04865;product=glycogen debranching enzyme GlgX;protein_id=TGC99215.1;transl_table=11 PYKB01000421.1 Genbank gene 4446 4531 . - . ID=gene-C9F09_04870;Name=C9F09_04870;end_range=4531,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04870;partial=true PYKB01000421.1 Protein Homology CDS 4446 4531 . - 2 ID=cds-TGC99216.1;Parent=gene-C9F09_04870;Dbxref=NCBI_GP:TGC99216.1;Name=TGC99216.1;end_range=4531,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455935.1;locus_tag=C9F09_04870;partial=true;product=class I and II aminotransferase;protein_id=TGC99216.1;transl_table=11 ##sequence-region PYKB01001698.1 1 4523 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001698.1 Genbank region 1 4523 . + . ID=PYKB01001698.1:1..4523;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001698.1 Genbank pseudogene 73 2616 . - . ID=gene-C9F09_29665;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=pseudogene;locus_tag=C9F09_29665;pseudo=true PYKB01001698.1 Protein Homology CDS 73 2616 . - 0 ID=cds-C9F09_29665;Parent=gene-C9F09_29665;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=rpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=C9F09_29665;product=DNA-directed RNA polymerase subunit beta;pseudo=true;transl_table=11 PYKB01001698.1 Genbank gene 2934 3299 . - . ID=gene-C9F09_29670;Name=C9F09_29670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29670 PYKB01001698.1 Protein Homology CDS 2934 3299 . - 0 ID=cds-TGC72168.1;Parent=gene-C9F09_29670;Dbxref=NCBI_GP:TGC72168.1;Name=TGC72168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=C9F09_29670;product=50S ribosomal protein L7/L12;protein_id=TGC72168.1;transl_table=11 PYKB01001698.1 Genbank gene 3366 3863 . - . ID=gene-C9F09_29675;Name=C9F09_29675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29675 PYKB01001698.1 Protein Homology CDS 3366 3863 . - 0 ID=cds-TGC72169.1;Parent=gene-C9F09_29675;Dbxref=NCBI_GP:TGC72169.1;Name=TGC72169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=C9F09_29675;product=50S ribosomal protein L10;protein_id=TGC72169.1;transl_table=11 PYKB01001698.1 Genbank pseudogene 3879 4090 . + . ID=gene-C9F09_29680;Name=C9F09_29680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29680;pseudo=true PYKB01001698.1 Protein Homology CDS 3879 4090 . + 0 ID=cds-C9F09_29680;Parent=gene-C9F09_29680;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146311.1;locus_tag=C9F09_29680;product=transcriptional regulator;pseudo=true;transl_table=11 PYKB01001698.1 Genbank gene 4283 4523 . - . ID=gene-C9F09_29685;Name=C9F09_29685;end_range=4523,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29685;partial=true PYKB01001698.1 Protein Homology CDS 4283 4523 . - 1 ID=cds-TGC72170.1;Parent=gene-C9F09_29685;Dbxref=NCBI_GP:TGC72170.1;Name=TGC72170.1;end_range=4523,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457920.1;locus_tag=C9F09_29685;partial=true;product=50S ribosomal protein L1;protein_id=TGC72170.1;transl_table=11 ##sequence-region PYKB01000076.1 1 4523 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000076.1 Genbank region 1 4523 . + . ID=PYKB01000076.1:1..4523;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000076.1 Genbank gene 36 662 . + . ID=gene-C9F09_00890;Name=C9F09_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00890 PYKB01000076.1 Protein Homology CDS 36 662 . + 0 ID=cds-TGD05918.1;Parent=gene-C9F09_00890;Dbxref=NCBI_GP:TGD05918.1;Name=TGD05918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001803409.1;locus_tag=C9F09_00890;product=L-methionine/branched-chain amino acid transporter;protein_id=TGD05918.1;transl_table=11 PYKB01000076.1 Genbank gene 721 1236 . - . ID=gene-C9F09_00895;Name=C9F09_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00895 PYKB01000076.1 Protein Homology CDS 721 1236 . - 0 ID=cds-TGD05915.1;Parent=gene-C9F09_00895;Dbxref=NCBI_GP:TGD05915.1;Name=TGD05915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463191.3;locus_tag=C9F09_00895;product=membrane protein FxsA;protein_id=TGD05915.1;transl_table=11 PYKB01000076.1 Genbank gene 1538 2974 . + . ID=gene-C9F09_00900;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=C9F09_00900 PYKB01000076.1 Protein Homology CDS 1538 2974 . + 0 ID=cds-TGD05916.1;Parent=gene-C9F09_00900;Dbxref=NCBI_GP:TGD05916.1;Name=TGD05916.1;gbkey=CDS;gene=aspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458764.1;locus_tag=C9F09_00900;product=aspartate ammonia-lyase;protein_id=TGD05916.1;transl_table=11 PYKB01000076.1 Genbank gene 3089 4390 . + . ID=gene-C9F09_00905;Name=C9F09_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00905 PYKB01000076.1 Protein Homology CDS 3089 4390 . + 0 ID=cds-TGD05917.1;Parent=gene-C9F09_00905;Dbxref=NCBI_GP:TGD05917.1;Name=TGD05917.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=C9F09_00905;product=C4-dicarboxylate transporter;protein_id=TGD05917.1;transl_table=11 ##sequence-region PYKB01000595.1 1 4518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000595.1 Genbank region 1 4518 . + . ID=PYKB01000595.1:1..4518;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000595.1 Genbank pseudogene 37 552 . - . ID=gene-C9F09_08660;Name=C9F09_08660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08660;pseudo=true PYKB01000595.1 Protein Homology CDS 37 552 . - 0 ID=cds-C9F09_08660;Parent=gene-C9F09_08660;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014599107.1;locus_tag=C9F09_08660;product=MFS transporter;pseudo=true;transl_table=11 PYKB01000595.1 Genbank gene 891 1814 . + . ID=gene-C9F09_08665;Name=C9F09_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08665 PYKB01000595.1 Protein Homology CDS 891 1814 . + 0 ID=cds-TGC95459.1;Parent=gene-C9F09_08665;Dbxref=NCBI_GP:TGC95459.1;Name=TGC95459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705007.1;locus_tag=C9F09_08665;product=LysR family transcriptional regulator;protein_id=TGC95459.1;transl_table=11 PYKB01000595.1 Genbank gene 1888 2562 . + . ID=gene-C9F09_08670;Name=C9F09_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08670 PYKB01000595.1 Protein Homology CDS 1888 2562 . + 0 ID=cds-TGC95460.1;Parent=gene-C9F09_08670;Dbxref=NCBI_GP:TGC95460.1;Name=TGC95460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=C9F09_08670;product=transcriptional regulator;protein_id=TGC95460.1;transl_table=11 PYKB01000595.1 Genbank gene 2562 3557 . + . ID=gene-C9F09_08675;Name=C9F09_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08675 PYKB01000595.1 Protein Homology CDS 2562 3557 . + 0 ID=cds-TGC95461.1;Parent=gene-C9F09_08675;Dbxref=NCBI_GP:TGC95461.1;Name=TGC95461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=C9F09_08675;product=secretion protein HlyD;protein_id=TGC95461.1;transl_table=11 PYKB01000595.1 Genbank gene 3550 4518 . + . ID=gene-C9F09_08680;Name=C9F09_08680;end_range=4518,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08680;partial=true PYKB01000595.1 Protein Homology CDS 3550 4518 . + 0 ID=cds-TGC95462.1;Parent=gene-C9F09_08680;Dbxref=NCBI_GP:TGC95462.1;Name=TGC95462.1;end_range=4518,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455355.1;locus_tag=C9F09_08680;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGC95462.1;transl_table=11 ##sequence-region PYKB01000660.1 1 4518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000660.1 Genbank region 1 4518 . + . ID=PYKB01000660.1:1..4518;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000660.1 Genbank gene 1 353 . - . ID=gene-C9F09_09925;Name=C9F09_09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09925;partial=true;start_range=.,1 PYKB01000660.1 Protein Homology CDS 1 353 . - 0 ID=cds-TGC94205.1;Parent=gene-C9F09_09925;Dbxref=NCBI_GP:TGC94205.1;Name=TGC94205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455979.1;locus_tag=C9F09_09925;partial=true;product=YnfC family lipoprotein;protein_id=TGC94205.1;start_range=.,1;transl_table=11 PYKB01000660.1 Genbank gene 457 765 . + . ID=gene-C9F09_09930;Name=C9F09_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09930 PYKB01000660.1 Protein Homology CDS 457 765 . + 0 ID=cds-TGC94202.1;Parent=gene-C9F09_09930;Dbxref=NCBI_GP:TGC94202.1;Name=TGC94202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=C9F09_09930;product=DUF1161 domain-containing protein;protein_id=TGC94202.1;transl_table=11 PYKB01000660.1 Genbank gene 922 3360 . + . ID=gene-C9F09_09935;Name=C9F09_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09935 PYKB01000660.1 Protein Homology CDS 922 3360 . + 0 ID=cds-TGC94203.1;Parent=gene-C9F09_09935;Dbxref=NCBI_GP:TGC94203.1;Name=TGC94203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455980.1;locus_tag=C9F09_09935;product=dimethyl sulfoxide reductase subunit A;protein_id=TGC94203.1;transl_table=11 PYKB01000660.1 Genbank gene 3459 4518 . + . ID=gene-C9F09_09940;Name=C9F09_09940;end_range=4518,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09940;partial=true PYKB01000660.1 Protein Homology CDS 3459 4518 . + 0 ID=cds-TGC94204.1;Parent=gene-C9F09_09940;Dbxref=NCBI_GP:TGC94204.1;Name=TGC94204.1;end_range=4518,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=C9F09_09940;partial=true;product=dimethyl sulfoxide reductase subunit A;protein_id=TGC94204.1;transl_table=11 ##sequence-region PYKB01000341.1 1 4509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000341.1 Genbank region 1 4509 . + . ID=PYKB01000341.1:1..4509;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000341.1 Genbank gene 1 545 . + . ID=gene-C9F09_03780;Name=C9F09_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03780;partial=true;start_range=.,1 PYKB01000341.1 Protein Homology CDS 1 545 . + 2 ID=cds-TGD00743.1;Parent=gene-C9F09_03780;Dbxref=NCBI_GP:TGD00743.1;Name=TGD00743.1;Note=citrate-ACP transferase%2C the alpha subunit catalyzes the formation of (3S)-citryl-CoA from acetyl-CoA and citrate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455198.1;locus_tag=C9F09_03780;partial=true;product=citrate lyase subunit alpha;protein_id=TGD00743.1;start_range=.,1;transl_table=11 PYKB01000341.1 Genbank gene 549 1100 . + . ID=gene-C9F09_03785;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=C9F09_03785 PYKB01000341.1 Protein Homology CDS 549 1100 . + 0 ID=cds-TGD00744.1;Parent=gene-C9F09_03785;Dbxref=NCBI_GP:TGD00744.1;Name=TGD00744.1;gbkey=CDS;gene=citX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=C9F09_03785;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=TGD00744.1;transl_table=11 PYKB01000341.1 Genbank gene 1072 1968 . + . ID=gene-C9F09_03790;Name=C9F09_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03790 PYKB01000341.1 Protein Homology CDS 1072 1968 . + 0 ID=cds-TGD00745.1;Parent=gene-C9F09_03790;Dbxref=NCBI_GP:TGD00745.1;Name=TGD00745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455196.1;locus_tag=C9F09_03790;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=TGD00745.1;transl_table=11 PYKB01000341.1 Genbank gene 2006 3469 . + . ID=gene-C9F09_03795;Name=C9F09_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03795 PYKB01000341.1 Protein Homology CDS 2006 3469 . + 0 ID=cds-TGD00746.1;Parent=gene-C9F09_03795;Dbxref=NCBI_GP:TGD00746.1;Name=TGD00746.1;Note=involved in the transport of citrate into the cell along with the export of succinate out of the cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=C9F09_03795;product=anion permease;protein_id=TGD00746.1;transl_table=11 PYKB01000341.1 Genbank gene 3579 4385 . + . ID=gene-C9F09_03800;Name=C9F09_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03800 PYKB01000341.1 Protein Homology CDS 3579 4385 . + 0 ID=cds-TGD00747.1;Parent=gene-C9F09_03800;Dbxref=NCBI_GP:TGD00747.1;Name=TGD00747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455194.1;locus_tag=C9F09_03800;product=ribonuclease I;protein_id=TGD00747.1;transl_table=11 ##sequence-region PYKB01000564.1 1 12315 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000564.1 Genbank region 1 12315 . + . ID=PYKB01000564.1:1..12315;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000564.1 Genbank gene 85 1293 . + . ID=gene-C9F09_07835;Name=C9F09_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07835 PYKB01000564.1 Protein Homology CDS 85 1293 . + 0 ID=cds-TGC96178.1;Parent=gene-C9F09_07835;Dbxref=NCBI_GP:TGC96178.1;Name=TGC96178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=C9F09_07835;product=MFS transporter;protein_id=TGC96178.1;transl_table=11 PYKB01000564.1 Genbank gene 1357 2004 . + . ID=gene-C9F09_07840;Name=C9F09_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07840 PYKB01000564.1 Protein Homology CDS 1357 2004 . + 0 ID=cds-TGC96179.1;Parent=gene-C9F09_07840;Dbxref=NCBI_GP:TGC96179.1;Name=TGC96179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455658.1;locus_tag=C9F09_07840;product=glutaredoxin 2;protein_id=TGC96179.1;transl_table=11 PYKB01000564.1 Genbank gene 2129 2689 . + . ID=gene-C9F09_07845;Name=C9F09_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07845 PYKB01000564.1 Protein Homology CDS 2129 2689 . + 0 ID=cds-TGC96180.1;Parent=gene-C9F09_07845;Dbxref=NCBI_GP:TGC96180.1;Name=TGC96180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=C9F09_07845;product=lipoprotein;protein_id=TGC96180.1;transl_table=11 PYKB01000564.1 Genbank gene 2793 3839 . + . ID=gene-C9F09_07850;Name=C9F09_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07850 PYKB01000564.1 Protein Homology CDS 2793 3839 . + 0 ID=cds-TGC96181.1;Parent=gene-C9F09_07850;Dbxref=NCBI_GP:TGC96181.1;Name=TGC96181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=C9F09_07850;product=dihydroorotase;protein_id=TGC96181.1;transl_table=11 PYKB01000564.1 Genbank gene 3913 4158 . + . ID=gene-C9F09_07855;Name=C9F09_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07855 PYKB01000564.1 Protein Homology CDS 3913 4158 . + 0 ID=cds-TGC96182.1;Parent=gene-C9F09_07855;Dbxref=NCBI_GP:TGC96182.1;Name=TGC96182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=C9F09_07855;product=DNA damage-inducible protein I;protein_id=TGC96182.1;transl_table=11 PYKB01000564.1 Genbank gene 4448 4702 . + . ID=gene-C9F09_07860;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;gene_synonym=yceP;locus_tag=C9F09_07860 PYKB01000564.1 Protein Homology CDS 4448 4702 . + 0 ID=cds-TGC96183.1;Parent=gene-C9F09_07860;Dbxref=NCBI_GP:TGC96183.1;Name=TGC96183.1;Note=BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=C9F09_07860;product=transcriptional regulator;protein_id=TGC96183.1;transl_table=11 PYKB01000564.1 Genbank gene 4815 5933 . + . ID=gene-C9F09_07865;Name=C9F09_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07865 PYKB01000564.1 Protein Homology CDS 4815 5933 . + 0 ID=cds-TGC96184.1;Parent=gene-C9F09_07865;Dbxref=NCBI_GP:TGC96184.1;Name=TGC96184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=C9F09_07865;product=N-methyl-L-tryptophan oxidase;protein_id=TGC96184.1;transl_table=11 PYKB01000564.1 Genbank gene 5974 6087 . + . ID=gene-C9F09_07870;Name=C9F09_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07870 PYKB01000564.1 Protein Homology CDS 5974 6087 . + 0 ID=cds-TGC96185.1;Parent=gene-C9F09_07870;Dbxref=NCBI_GP:TGC96185.1;Name=TGC96185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455652.1;locus_tag=C9F09_07870;product=DUF2770 domain-containing protein;protein_id=TGC96185.1;transl_table=11 PYKB01000564.1 Genbank gene 6136 6339 . - . ID=gene-C9F09_07875;Name=C9F09_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07875 PYKB01000564.1 Protein Homology CDS 6136 6339 . - 0 ID=cds-TGC96186.1;Parent=gene-C9F09_07875;Dbxref=NCBI_GP:TGC96186.1;Name=TGC96186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539697.1;locus_tag=C9F09_07875;product=hypothetical protein;protein_id=TGC96186.1;transl_table=11 PYKB01000564.1 Genbank gene 6350 6922 . + . ID=gene-C9F09_07880;Name=C9F09_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07880 PYKB01000564.1 Protein Homology CDS 6350 6922 . + 0 ID=cds-TGC96187.1;Parent=gene-C9F09_07880;Dbxref=NCBI_GP:TGC96187.1;Name=TGC96187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=C9F09_07880;product=cytochrome b;protein_id=TGC96187.1;transl_table=11 PYKB01000564.1 Genbank gene 6919 7494 . + . ID=gene-C9F09_07885;Name=C9F09_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07885 PYKB01000564.1 Protein Homology CDS 6919 7494 . + 0 ID=cds-TGC96188.1;Parent=gene-C9F09_07885;Dbxref=NCBI_GP:TGC96188.1;Name=TGC96188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455651.1;locus_tag=C9F09_07885;product=YceI family protein;protein_id=TGC96188.1;transl_table=11 PYKB01000564.1 Genbank gene 7546 8598 . - . ID=gene-C9F09_07890;Name=C9F09_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07890 PYKB01000564.1 Protein Homology CDS 7546 8598 . - 0 ID=cds-TGC96189.1;Parent=gene-C9F09_07890;Dbxref=NCBI_GP:TGC96189.1;Name=TGC96189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=C9F09_07890;product=hypothetical protein;protein_id=TGC96189.1;transl_table=11 PYKB01000564.1 Genbank gene 8818 9738 . + . ID=gene-C9F09_07895;Name=C9F09_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07895 PYKB01000564.1 Protein Homology CDS 8818 9738 . + 0 ID=cds-TGC96190.1;Parent=gene-C9F09_07895;Dbxref=NCBI_GP:TGC96190.1;Name=TGC96190.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=C9F09_07895;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=TGC96190.1;transl_table=11 PYKB01000564.1 Genbank pseudogene 9701 9930 . - . ID=gene-C9F09_07900;Name=C9F09_07900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07900;pseudo=true PYKB01000564.1 Protein Homology CDS 9701 9930 . - 0 ID=cds-C9F09_07900;Parent=gene-C9F09_07900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001597211.1;locus_tag=C9F09_07900;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000564.1 Genbank gene 9893 11107 . + . ID=gene-C9F09_07905;Name=C9F09_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07905 PYKB01000564.1 Protein Homology CDS 9893 11107 . + 0 ID=cds-TGC96191.1;Parent=gene-C9F09_07905;Dbxref=NCBI_GP:TGC96191.1;Name=TGC96191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455648.1;locus_tag=C9F09_07905;product=multidrug resistance protein MdtG;protein_id=TGC96191.1;transl_table=11 PYKB01000564.1 Genbank gene 11189 11563 . + . ID=gene-C9F09_07910;Name=C9F09_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07910 PYKB01000564.1 Protein Homology CDS 11189 11563 . + 0 ID=cds-TGC96192.1;Parent=gene-C9F09_07910;Dbxref=NCBI_GP:TGC96192.1;Name=TGC96192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455647.1;locus_tag=C9F09_07910;product=secY/secA suppressor protein;protein_id=TGC96192.1;transl_table=11 PYKB01000564.1 Genbank gene 11564 11791 . - . ID=gene-C9F09_07915;Name=C9F09_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07915 PYKB01000564.1 Protein Homology CDS 11564 11791 . - 0 ID=cds-TGC96194.1;Parent=gene-C9F09_07915;Dbxref=NCBI_GP:TGC96194.1;Name=TGC96194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455646.1;locus_tag=C9F09_07915;product=YceK/YidQ family lipoprotein;protein_id=TGC96194.1;transl_table=11 PYKB01000564.1 Genbank gene 11865 12315 . - . ID=gene-C9F09_07920;Name=C9F09_07920;end_range=12315,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07920;partial=true PYKB01000564.1 Protein Homology CDS 11865 12315 . - 1 ID=cds-TGC96193.1;Parent=gene-C9F09_07920;Dbxref=NCBI_GP:TGC96193.1;Name=TGC96193.1;Note=necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space;end_range=12315,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460122.1;locus_tag=C9F09_07920;partial=true;product=glucan biosynthesis glucosyltransferase H;protein_id=TGC96193.1;transl_table=11 ##sequence-region PYKB01000722.1 1 4500 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000722.1 Genbank region 1 4500 . + . ID=PYKB01000722.1:1..4500;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000722.1 Genbank gene 1 501 . + . ID=gene-C9F09_11035;Name=C9F09_11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11035;partial=true;start_range=.,1 PYKB01000722.1 Protein Homology CDS 1 501 . + 0 ID=cds-TGC93420.1;Parent=gene-C9F09_11035;Dbxref=NCBI_GP:TGC93420.1;Name=TGC93420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456616.1;locus_tag=C9F09_11035;partial=true;product=LysR family transcriptional regulator;protein_id=TGC93420.1;start_range=.,1;transl_table=11 PYKB01000722.1 Genbank gene 735 797 . + . ID=gene-C9F09_11040;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=C9F09_11040 PYKB01000722.1 Protein Homology CDS 735 797 . + 0 ID=cds-TGC93422.1;Parent=gene-C9F09_11040;Dbxref=NCBI_GP:TGC93422.1;Name=TGC93422.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=C9F09_11040;product=membrane protein YoeI;protein_id=TGC93422.1;transl_table=11 PYKB01000722.1 Genbank pseudogene 787 2142 . + . ID=gene-C9F09_11045;Name=C9F09_11045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11045;pseudo=true PYKB01000722.1 Protein Homology CDS 787 2142 . + 0 ID=cds-C9F09_11045;Parent=gene-C9F09_11045;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=C9F09_11045;product=putrescine/spermidine ABC transporter;pseudo=true;transl_table=11 PYKB01000722.1 Genbank gene 2281 3711 . - . ID=gene-C9F09_11050;Name=C9F09_11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11050 PYKB01000722.1 Protein Homology CDS 2281 3711 . - 0 ID=cds-TGC93421.1;Parent=gene-C9F09_11050;Dbxref=NCBI_GP:TGC93421.1;Name=TGC93421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456614.1;locus_tag=C9F09_11050;product=exodeoxyribonuclease I;protein_id=TGC93421.1;transl_table=11 PYKB01000722.1 Genbank gene 4078 4500 . - . ID=gene-C9F09_11055;Name=C9F09_11055;end_range=4500,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11055;partial=true PYKB01000722.1 Protein Homology CDS 4078 4500 . - 0 ID=cds-TGC93423.1;Parent=gene-C9F09_11055;Dbxref=NCBI_GP:TGC93423.1;Name=TGC93423.1;end_range=4500,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=C9F09_11055;partial=true;product=E3 ubiquitin--protein ligase;protein_id=TGC93423.1;transl_table=11 ##sequence-region PYKB01000249.1 1 4491 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000249.1 Genbank region 1 4491 . + . ID=PYKB01000249.1:1..4491;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000249.1 Genbank gene 210 1667 . + . ID=gene-C9F09_02720;Name=C9F09_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02720 PYKB01000249.1 Protein Homology CDS 210 1667 . + 0 ID=cds-TGD02585.1;Parent=gene-C9F09_02720;Dbxref=NCBI_GP:TGD02585.1;Name=TGD02585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=C9F09_02720;product=FMN/FAD transporter;protein_id=TGD02585.1;transl_table=11 PYKB01000249.1 Genbank gene 1808 1883 . + . ID=gene-C9F09_02725;Name=C9F09_02725;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_02725 PYKB01000249.1 tRNAscan-SE tRNA 1808 1883 . + . ID=rna-C9F09_02725;Parent=gene-C9F09_02725;anticodon=(pos:1841..1843);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_02725;product=tRNA-Asn PYKB01000249.1 tRNAscan-SE exon 1808 1883 . + . ID=exon-C9F09_02725-1;Parent=rna-C9F09_02725;anticodon=(pos:1841..1843);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_02725;product=tRNA-Asn PYKB01000249.1 Genbank gene 2110 3039 . - . ID=gene-C9F09_02730;Name=C9F09_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02730 PYKB01000249.1 Protein Homology CDS 2110 3039 . - 0 ID=cds-TGD02586.1;Parent=gene-C9F09_02730;Dbxref=NCBI_GP:TGD02586.1;Name=TGD02586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=C9F09_02730;product=L%2CD-transpeptidase;protein_id=TGD02586.1;transl_table=11 PYKB01000249.1 Genbank gene 3117 4187 . - . ID=gene-C9F09_02735;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=C9F09_02735 PYKB01000249.1 Protein Homology CDS 3117 4187 . - 0 ID=cds-TGD02587.1;Parent=gene-C9F09_02735;Dbxref=NCBI_GP:TGD02587.1;Name=TGD02587.1;gbkey=CDS;gene=cobT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=C9F09_02735;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=TGD02587.1;transl_table=11 PYKB01000249.1 Genbank pseudogene 4214 4465 . - . ID=gene-C9F09_02740;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=pseudogene;locus_tag=C9F09_02740;pseudo=true PYKB01000249.1 Protein Homology CDS 4214 4465 . - 0 ID=cds-C9F09_02740;Parent=gene-C9F09_02740;Note=catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=cobS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=C9F09_02740;product=adenosylcobinamide-GDP ribazoletransferase;pseudo=true;transl_table=11 ##sequence-region PYKB01000444.1 1 4489 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000444.1 Genbank region 1 4489 . + . ID=PYKB01000444.1:1..4489;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000444.1 Genbank gene 1 163 . - . ID=gene-C9F09_05500;Name=C9F09_05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05500;partial=true;start_range=.,1 PYKB01000444.1 Protein Homology CDS 1 163 . - 0 ID=cds-TGC98741.1;Parent=gene-C9F09_05500;Dbxref=NCBI_GP:TGC98741.1;Name=TGC98741.1;Note=oxidizes malate to oxaloacetate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=C9F09_05500;partial=true;product=malate dehydrogenase;protein_id=TGC98741.1;start_range=.,1;transl_table=11 PYKB01000444.1 Genbank gene 578 1048 . + . ID=gene-C9F09_05505;Name=C9F09_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05505 PYKB01000444.1 Protein Homology CDS 578 1048 . + 0 ID=cds-TGC98742.1;Parent=gene-C9F09_05505;Dbxref=NCBI_GP:TGC98742.1;Name=TGC98742.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=C9F09_05505;product=arginine repressor;protein_id=TGC98742.1;transl_table=11 PYKB01000444.1 Genbank gene 1413 1676 . + . ID=gene-C9F09_05510;Name=C9F09_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05510 PYKB01000444.1 Protein Homology CDS 1413 1676 . + 0 ID=cds-TGC98743.1;Parent=gene-C9F09_05510;Dbxref=NCBI_GP:TGC98743.1;Name=TGC98743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=C9F09_05510;product=DUF1471 domain-containing protein;protein_id=TGC98743.1;transl_table=11 PYKB01000444.1 Genbank gene 1780 2046 . + . ID=gene-C9F09_05515;Name=C9F09_05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05515 PYKB01000444.1 Protein Homology CDS 1780 2046 . + 0 ID=cds-TGC98744.1;Parent=gene-C9F09_05515;Dbxref=NCBI_GP:TGC98744.1;Name=TGC98744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457738.1;locus_tag=C9F09_05515;product=DUF1471 domain-containing protein;protein_id=TGC98744.1;transl_table=11 PYKB01000444.1 Genbank gene 2107 2379 . - . ID=gene-C9F09_05520;Name=C9F09_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05520 PYKB01000444.1 Protein Homology CDS 2107 2379 . - 0 ID=cds-TGC98745.1;Parent=gene-C9F09_05520;Dbxref=NCBI_GP:TGC98745.1;Name=TGC98745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457739.1;locus_tag=C9F09_05520;product=hypothetical protein;protein_id=TGC98745.1;transl_table=11 PYKB01000444.1 Genbank gene 2551 4489 . - . ID=gene-C9F09_05525;Name=C9F09_05525;end_range=4489,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05525;partial=true PYKB01000444.1 Protein Homology CDS 2551 4489 . - 1 ID=cds-TGC98746.1;Parent=gene-C9F09_05525;Dbxref=NCBI_GP:TGC98746.1;Name=TGC98746.1;end_range=4489,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=C9F09_05525;partial=true;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=TGC98746.1;transl_table=11 ##sequence-region PYKB01001272.1 1 4482 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001272.1 Genbank region 1 4482 . + . ID=PYKB01001272.1:1..4482;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001272.1 Genbank gene 1 240 . + . ID=gene-C9F09_21735;Name=C9F09_21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21735;partial=true;start_range=.,1 PYKB01001272.1 Protein Homology CDS 1 240 . + 0 ID=cds-TGC82198.1;Parent=gene-C9F09_21735;Dbxref=NCBI_GP:TGC82198.1;Name=TGC82198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458096.3;locus_tag=C9F09_21735;partial=true;product=hypothetical protein;protein_id=TGC82198.1;start_range=.,1;transl_table=11 PYKB01001272.1 Genbank gene 285 1748 . - . ID=gene-C9F09_21740;Name=C9F09_21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21740 PYKB01001272.1 Protein Homology CDS 285 1748 . - 0 ID=cds-TGC82199.1;Parent=gene-C9F09_21740;Dbxref=NCBI_GP:TGC82199.1;Name=TGC82199.1;Note=involved in the transport or adenine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462750.3;locus_tag=C9F09_21740;product=adenine permease PurP;protein_id=TGC82199.1;transl_table=11 PYKB01001272.1 Genbank gene 1791 2456 . + . ID=gene-C9F09_21745;Name=C9F09_21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21745 PYKB01001272.1 Protein Homology CDS 1791 2456 . + 0 ID=cds-TGC82200.1;Parent=gene-C9F09_21745;Dbxref=NCBI_GP:TGC82200.1;Name=TGC82200.1;Note=YieH%3B catalyzes the dephosphorylation of phosphoenolpyruvate%2C AMP and p-nitrophenyl phosphate%3B purine and pyrimidine nucleotides are secondary substrates%3B member of the haloacid dehalogenase-like hydrolases superfamily;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=C9F09_21745;product=6-phosphogluconate phosphatase;protein_id=TGC82200.1;transl_table=11 PYKB01001272.1 Genbank gene 2551 3276 . - . ID=gene-C9F09_21750;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=C9F09_21750 PYKB01001272.1 Protein Homology CDS 2551 3276 . - 0 ID=cds-TGC82201.1;Parent=gene-C9F09_21750;Dbxref=NCBI_GP:TGC82201.1;Name=TGC82201.1;gbkey=CDS;gene=phoU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435540.1;locus_tag=C9F09_21750;product=phosphate transport system regulator PhoU;protein_id=TGC82201.1;transl_table=11 PYKB01001272.1 Genbank gene 3291 4064 . - . ID=gene-C9F09_21755;Name=C9F09_21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21755 PYKB01001272.1 Protein Homology CDS 3291 4064 . - 0 ID=cds-TGC82202.1;Parent=gene-C9F09_21755;Dbxref=NCBI_GP:TGC82202.1;Name=TGC82202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=C9F09_21755;product=phosphate ABC transporter ATP-binding protein;protein_id=TGC82202.1;transl_table=11 PYKB01001272.1 Genbank gene 4151 4482 . - . ID=gene-C9F09_21760;Name=pstA;end_range=4482,.;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=C9F09_21760;partial=true PYKB01001272.1 Protein Homology CDS 4151 4482 . - 2 ID=cds-TGC82203.1;Parent=gene-C9F09_21760;Dbxref=NCBI_GP:TGC82203.1;Name=TGC82203.1;Note=Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;end_range=4482,.;gbkey=CDS;gene=pstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458091.1;locus_tag=C9F09_21760;partial=true;product=phosphate ABC transporter permease PtsA;protein_id=TGC82203.1;transl_table=11 ##sequence-region PYKB01001652.1 1 4468 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001652.1 Genbank region 1 4468 . + . ID=PYKB01001652.1:1..4468;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001652.1 Genbank gene 1 752 . - . ID=gene-C9F09_28815;Name=C9F09_28815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28815;partial=true;start_range=.,1 PYKB01001652.1 Protein Homology CDS 1 752 . - 0 ID=cds-TGC73518.1;Parent=gene-C9F09_28815;Dbxref=NCBI_GP:TGC73518.1;Name=TGC73518.1;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457119.1;locus_tag=C9F09_28815;partial=true;product=ATP-dependent RNA helicase SrmB;protein_id=TGC73518.1;start_range=.,1;transl_table=11 PYKB01001652.1 Genbank gene 883 1620 . + . ID=gene-C9F09_28820;Name=C9F09_28820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28820 PYKB01001652.1 Protein Homology CDS 883 1620 . + 0 ID=cds-TGC73519.1;Parent=gene-C9F09_28820;Dbxref=NCBI_GP:TGC73519.1;Name=TGC73519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=C9F09_28820;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase;protein_id=TGC73519.1;transl_table=11 PYKB01001652.1 Genbank gene 1605 3227 . - . ID=gene-C9F09_28825;Name=C9F09_28825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28825 PYKB01001652.1 Protein Homology CDS 1605 3227 . - 0 ID=cds-TGC73520.1;Parent=gene-C9F09_28825;Dbxref=NCBI_GP:TGC73520.1;Name=TGC73520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457117.1;locus_tag=C9F09_28825;product=L-aspartate oxidase;protein_id=TGC73520.1;transl_table=11 PYKB01001652.1 Genbank gene 3312 3491 . + . ID=gene-C9F09_28830;Name=C9F09_28830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28830 PYKB01001652.1 Protein Homology CDS 3312 3491 . + 0 ID=cds-TGC73521.1;Parent=gene-C9F09_28830;Dbxref=NCBI_GP:TGC73521.1;Name=TGC73521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521719.1;locus_tag=C9F09_28830;product=hypothetical protein;protein_id=TGC73521.1;transl_table=11 PYKB01001652.1 Genbank gene 3652 4227 . + . ID=gene-C9F09_28835;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=C9F09_28835 PYKB01001652.1 Protein Homology CDS 3652 4227 . + 0 ID=cds-TGC73522.1;Parent=gene-C9F09_28835;Dbxref=NCBI_GP:TGC73522.1;Name=TGC73522.1;gbkey=CDS;gene=rpoE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457116.1;locus_tag=C9F09_28835;product=RNA polymerase sigma factor RpoE;protein_id=TGC73522.1;transl_table=11 PYKB01001652.1 Genbank pseudogene 4259 4390 . + . ID=gene-C9F09_28840;Name=C9F09_28840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28840;pseudo=true PYKB01001652.1 Protein Homology CDS 4259 4390 . + 0 ID=cds-C9F09_28840;Parent=gene-C9F09_28840;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=C9F09_28840;product=anti-sigma-E factor RseA;pseudo=true;transl_table=11 ##sequence-region PYKB01001250.1 1 4462 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001250.1 Genbank region 1 4462 . + . ID=PYKB01001250.1:1..4462;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001250.1 Genbank gene 1 927 . - . ID=gene-C9F09_21315;Name=C9F09_21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21315;partial=true;start_range=.,1 PYKB01001250.1 Protein Homology CDS 1 927 . - 0 ID=cds-TGC82431.1;Parent=gene-C9F09_21315;Dbxref=NCBI_GP:TGC82431.1;Name=TGC82431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=C9F09_21315;partial=true;product=transcriptional regulator LrhA;protein_id=TGC82431.1;start_range=.,1;transl_table=11 PYKB01001250.1 Genbank gene 1593 1778 . - . ID=gene-C9F09_21320;Name=C9F09_21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21320 PYKB01001250.1 Protein Homology CDS 1593 1778 . - 0 ID=cds-TGC82432.1;Parent=gene-C9F09_21320;Dbxref=NCBI_GP:TGC82432.1;Name=TGC82432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001522444.1;locus_tag=C9F09_21320;product=hypothetical protein;protein_id=TGC82432.1;transl_table=11 PYKB01001250.1 Genbank gene 1860 3074 . + . ID=gene-C9F09_21325;Name=C9F09_21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21325 PYKB01001250.1 Protein Homology CDS 1860 3074 . + 0 ID=cds-TGC82433.1;Parent=gene-C9F09_21325;Dbxref=NCBI_GP:TGC82433.1;Name=TGC82433.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456873.1;locus_tag=C9F09_21325;product=pyridoxal phosphate-dependent aminotransferase;protein_id=TGC82433.1;transl_table=11 PYKB01001250.1 Genbank gene 3168 3767 . + . ID=gene-C9F09_21330;Name=C9F09_21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21330 PYKB01001250.1 Protein Homology CDS 3168 3767 . + 0 ID=cds-TGC82434.1;Parent=gene-C9F09_21330;Dbxref=NCBI_GP:TGC82434.1;Name=TGC82434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=C9F09_21330;product=5'-deoxynucleotidase;protein_id=TGC82434.1;transl_table=11 PYKB01001250.1 Genbank gene 3859 4462 . - . ID=gene-C9F09_21335;Name=C9F09_21335;end_range=4462,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21335;partial=true PYKB01001250.1 Protein Homology CDS 3859 4462 . - 1 ID=cds-TGC82435.1;Parent=gene-C9F09_21335;Dbxref=NCBI_GP:TGC82435.1;Name=TGC82435.1;end_range=4462,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=C9F09_21335;partial=true;product=SLC13 family permease;protein_id=TGC82435.1;transl_table=11 ##sequence-region PYKB01001122.1 1 4424 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001122.1 Genbank region 1 4424 . + . ID=PYKB01001122.1:1..4424;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001122.1 Genbank gene 1 927 . - . ID=gene-C9F09_18855;Name=C9F09_18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18855;partial=true;start_range=.,1 PYKB01001122.1 Protein Homology CDS 1 927 . - 0 ID=cds-TGC85466.1;Parent=gene-C9F09_18855;Dbxref=NCBI_GP:TGC85466.1;Name=TGC85466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455874.1;locus_tag=C9F09_18855;partial=true;product=carboxylesterase;protein_id=TGC85466.1;start_range=.,1;transl_table=11 PYKB01001122.1 Genbank gene 976 2319 . - . ID=gene-C9F09_18860;Name=C9F09_18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18860 PYKB01001122.1 Protein Homology CDS 976 2319 . - 0 ID=cds-TGC85467.1;Parent=gene-C9F09_18860;Dbxref=NCBI_GP:TGC85467.1;Name=TGC85467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=C9F09_18860;product=DUF1338 domain-containing protein;protein_id=TGC85467.1;transl_table=11 PYKB01001122.1 Genbank gene 2612 3535 . + . ID=gene-C9F09_18865;Name=C9F09_18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18865 PYKB01001122.1 Protein Homology CDS 2612 3535 . + 0 ID=cds-TGC85468.1;Parent=gene-C9F09_18865;Dbxref=NCBI_GP:TGC85468.1;Name=TGC85468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=C9F09_18865;product=LysR family transcriptional regulator;protein_id=TGC85468.1;transl_table=11 PYKB01001122.1 Genbank gene 3596 4424 . - . ID=gene-C9F09_18870;Name=C9F09_18870;end_range=4424,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18870;partial=true PYKB01001122.1 Protein Homology CDS 3596 4424 . - 1 ID=cds-TGC85469.1;Parent=gene-C9F09_18870;Dbxref=NCBI_GP:TGC85469.1;Name=TGC85469.1;end_range=4424,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=C9F09_18870;partial=true;product=methyl-accepting chemotaxis protein;protein_id=TGC85469.1;transl_table=11 ##sequence-region PYKB01000827.1 1 4413 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000827.1 Genbank region 1 4413 . + . ID=PYKB01000827.1:1..4413;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000827.1 Genbank gene 1 798 . + . ID=gene-C9F09_13025;Name=C9F09_13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13025;partial=true;start_range=.,1 PYKB01000827.1 Protein Homology CDS 1 798 . + 0 ID=cds-TGC91662.1;Parent=gene-C9F09_13025;Dbxref=NCBI_GP:TGC91662.1;Name=TGC91662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120210.1;locus_tag=C9F09_13025;partial=true;product=integrase;protein_id=TGC91662.1;start_range=.,1;transl_table=11 PYKB01000827.1 Genbank gene 795 1667 . + . ID=gene-C9F09_13030;Name=C9F09_13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13030 PYKB01000827.1 GeneMarkS+ CDS 795 1667 . + 0 ID=cds-TGC91663.1;Parent=gene-C9F09_13030;Dbxref=NCBI_GP:TGC91663.1;Name=TGC91663.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_13030;product=hypothetical protein;protein_id=TGC91663.1;transl_table=11 PYKB01000827.1 Genbank gene 1772 2062 . + . ID=gene-C9F09_13035;Name=C9F09_13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13035 PYKB01000827.1 Protein Homology CDS 1772 2062 . + 0 ID=cds-TGC91664.1;Parent=gene-C9F09_13035;Dbxref=NCBI_GP:TGC91664.1;Name=TGC91664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003028198.1;locus_tag=C9F09_13035;product=AlpA family phage regulatory protein;protein_id=TGC91664.1;transl_table=11 PYKB01000827.1 Genbank gene 2155 2721 . + . ID=gene-C9F09_13040;Name=C9F09_13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13040 PYKB01000827.1 Protein Homology CDS 2155 2721 . + 0 ID=cds-TGC91669.1;Parent=gene-C9F09_13040;Dbxref=NCBI_GP:TGC91669.1;Name=TGC91669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000584652.1;locus_tag=C9F09_13040;product=hypothetical protein;protein_id=TGC91669.1;transl_table=11 PYKB01000827.1 Genbank gene 2714 3073 . + . ID=gene-C9F09_13045;Name=C9F09_13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13045 PYKB01000827.1 Protein Homology CDS 2714 3073 . + 0 ID=cds-TGC91665.1;Parent=gene-C9F09_13045;Dbxref=NCBI_GP:TGC91665.1;Name=TGC91665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246999.1;locus_tag=C9F09_13045;product=hypothetical protein;protein_id=TGC91665.1;transl_table=11 PYKB01000827.1 Genbank gene 3105 3389 . + . ID=gene-C9F09_13050;Name=C9F09_13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13050 PYKB01000827.1 Protein Homology CDS 3105 3389 . + 0 ID=cds-TGC91666.1;Parent=gene-C9F09_13050;Dbxref=NCBI_GP:TGC91666.1;Name=TGC91666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001027150.1;locus_tag=C9F09_13050;product=hypothetical protein;protein_id=TGC91666.1;transl_table=11 PYKB01000827.1 Genbank gene 3386 3769 . + . ID=gene-C9F09_13055;Name=C9F09_13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13055 PYKB01000827.1 Protein Homology CDS 3386 3769 . + 0 ID=cds-TGC91667.1;Parent=gene-C9F09_13055;Dbxref=NCBI_GP:TGC91667.1;Name=TGC91667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075579.1;locus_tag=C9F09_13055;product=hypothetical protein;protein_id=TGC91667.1;transl_table=11 PYKB01000827.1 Genbank gene 3766 4413 . + . ID=gene-C9F09_13060;Name=C9F09_13060;end_range=4413,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13060;partial=true PYKB01000827.1 Protein Homology CDS 3766 4413 . + 0 ID=cds-TGC91668.1;Parent=gene-C9F09_13060;Dbxref=NCBI_GP:TGC91668.1;Name=TGC91668.1;end_range=4413,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=C9F09_13060;partial=true;product=alkaline-shock protein;protein_id=TGC91668.1;transl_table=11 ##sequence-region PYKB01000789.1 1 4394 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000789.1 Genbank region 1 4394 . + . ID=PYKB01000789.1:1..4394;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000789.1 Genbank gene 1 1149 . - . ID=gene-C9F09_12235;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=C9F09_12235;partial=true;start_range=.,1 PYKB01000789.1 Protein Homology CDS 1 1149 . - 0 ID=cds-TGC92329.1;Parent=gene-C9F09_12235;Dbxref=NCBI_GP:TGC92329.1;Name=TGC92329.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456105.1;locus_tag=C9F09_12235;partial=true;product=multidrug transporter MdtK;protein_id=TGC92329.1;start_range=.,1;transl_table=11 PYKB01000789.1 Genbank gene 1366 2007 . + . ID=gene-C9F09_12240;Name=C9F09_12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12240 PYKB01000789.1 Protein Homology CDS 1366 2007 . + 0 ID=cds-TGC92330.1;Parent=gene-C9F09_12240;Dbxref=NCBI_GP:TGC92330.1;Name=TGC92330.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=C9F09_12240;product=riboflavin synthase;protein_id=TGC92330.1;transl_table=11 PYKB01000789.1 Genbank gene 2049 3197 . - . ID=gene-C9F09_12245;Name=C9F09_12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12245 PYKB01000789.1 Protein Homology CDS 2049 3197 . - 0 ID=cds-TGC92331.1;Parent=gene-C9F09_12245;Dbxref=NCBI_GP:TGC92331.1;Name=TGC92331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456103.1;locus_tag=C9F09_12245;product=cyclopropane fatty acyl phospholipid synthase;protein_id=TGC92331.1;transl_table=11 PYKB01000789.1 Genbank pseudogene 3487 4332 . - . ID=gene-C9F09_12250;Name=C9F09_12250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12250;pseudo=true PYKB01000789.1 Protein Homology CDS 3487 4332 . - 0 ID=cds-C9F09_12250;Parent=gene-C9F09_12250;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456102.1;locus_tag=C9F09_12250;product=Bcr/CflA family multidrug efflux MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKB01000911.1 1 4345 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000911.1 Genbank region 1 4345 . + . ID=PYKB01000911.1:1..4345;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000911.1 Genbank pseudogene 39 821 . - . ID=gene-C9F09_14960;Name=C9F09_14960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_14960;pseudo=true PYKB01000911.1 Protein Homology CDS 39 821 . - 0 ID=cds-C9F09_14960;Parent=gene-C9F09_14960;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455404.1;locus_tag=C9F09_14960;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;pseudo=true;transl_table=11 PYKB01000911.1 Genbank gene 1170 1646 . - . ID=gene-C9F09_14965;Name=C9F09_14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14965 PYKB01000911.1 Protein Homology CDS 1170 1646 . - 0 ID=cds-TGC89950.1;Parent=gene-C9F09_14965;Dbxref=NCBI_GP:TGC89950.1;Name=TGC89950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=C9F09_14965;product=YbjN domain-containing protein;protein_id=TGC89950.1;transl_table=11 PYKB01000911.1 Genbank gene 1742 2644 . - . ID=gene-C9F09_14970;Name=C9F09_14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14970 PYKB01000911.1 Protein Homology CDS 1742 2644 . - 0 ID=cds-TGC89951.1;Parent=gene-C9F09_14970;Dbxref=NCBI_GP:TGC89951.1;Name=TGC89951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455402.1;locus_tag=C9F09_14970;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=TGC89951.1;transl_table=11 PYKB01000911.1 Genbank gene 2702 3424 . - . ID=gene-C9F09_14975;Name=C9F09_14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14975 PYKB01000911.1 Protein Homology CDS 2702 3424 . - 0 ID=cds-TGC89952.1;Parent=gene-C9F09_14975;Dbxref=NCBI_GP:TGC89952.1;Name=TGC89952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=C9F09_14975;product=NADPH-dependent oxidoreductase;protein_id=TGC89952.1;transl_table=11 PYKB01000911.1 Genbank gene 3408 3698 . - . ID=gene-C9F09_14980;Name=C9F09_14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14980 PYKB01000911.1 Protein Homology CDS 3408 3698 . - 0 ID=cds-TGC89953.1;Parent=gene-C9F09_14980;Dbxref=NCBI_GP:TGC89953.1;Name=TGC89953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=C9F09_14980;product=hypothetical protein;protein_id=TGC89953.1;transl_table=11 PYKB01000911.1 Genbank gene 3868 4131 . + . ID=gene-C9F09_14985;Name=C9F09_14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14985 PYKB01000911.1 Protein Homology CDS 3868 4131 . + 0 ID=cds-TGC89954.1;Parent=gene-C9F09_14985;Dbxref=NCBI_GP:TGC89954.1;Name=TGC89954.1;Note=functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455399.1;locus_tag=C9F09_14985;product=glutaredoxin;protein_id=TGC89954.1;transl_table=11 PYKB01000911.1 Genbank gene 4163 4345 . - . ID=gene-C9F09_14990;Name=C9F09_14990;end_range=4345,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14990;partial=true PYKB01000911.1 Protein Homology CDS 4163 4345 . - 0 ID=cds-TGC89955.1;Parent=gene-C9F09_14990;Dbxref=NCBI_GP:TGC89955.1;Name=TGC89955.1;end_range=4345,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455398.1;locus_tag=C9F09_14990;partial=true;product=hypothetical protein;protein_id=TGC89955.1;transl_table=11 ##sequence-region PYKB01000344.1 1 12304 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000344.1 Genbank region 1 12304 . + . ID=PYKB01000344.1:1..12304;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000344.1 Genbank gene 52 1350 . - . ID=gene-C9F09_03825;Name=C9F09_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03825 PYKB01000344.1 Protein Homology CDS 52 1350 . - 0 ID=cds-TGD00643.1;Parent=gene-C9F09_03825;Dbxref=NCBI_GP:TGD00643.1;Name=TGD00643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=C9F09_03825;product=uracil/xanthine transporter;protein_id=TGD00643.1;transl_table=11 PYKB01000344.1 Genbank gene 1409 2770 . - . ID=gene-C9F09_03830;Name=C9F09_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03830 PYKB01000344.1 Protein Homology CDS 1409 2770 . - 0 ID=cds-TGD00644.1;Parent=gene-C9F09_03830;Dbxref=NCBI_GP:TGD00644.1;Name=TGD00644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455115.1;locus_tag=C9F09_03830;product=cyclic amidohydrolase;protein_id=TGD00644.1;transl_table=11 PYKB01000344.1 Genbank pseudogene 2849 4303 . - . ID=gene-C9F09_03835;Name=C9F09_03835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03835;pseudo=true PYKB01000344.1 Protein Homology CDS 2849 4303 . - 0 ID=cds-C9F09_03835;Parent=gene-C9F09_03835;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=C9F09_03835;product=allantoin permease;pseudo=true;transl_table=11 PYKB01000344.1 Genbank gene 4399 5646 . - . ID=gene-C9F09_03840;Name=C9F09_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03840 PYKB01000344.1 Protein Homology CDS 4399 5646 . - 0 ID=cds-TGD00645.1;Parent=gene-C9F09_03840;Dbxref=NCBI_GP:TGD00645.1;Name=TGD00645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455114.1;locus_tag=C9F09_03840;product=MFS transporter;protein_id=TGD00645.1;transl_table=11 PYKB01000344.1 Genbank pseudogene 5712 6590 . - . ID=gene-C9F09_03845;Name=C9F09_03845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03845;pseudo=true PYKB01000344.1 Protein Homology CDS 5712 6590 . - 0 ID=cds-C9F09_03845;Parent=gene-C9F09_03845;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=C9F09_03845;product=2-hydroxy-3-oxopropionate reductase;pseudo=true;transl_table=11 PYKB01000344.1 Genbank gene 6691 7467 . - . ID=gene-C9F09_03850;Name=C9F09_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03850 PYKB01000344.1 Protein Homology CDS 6691 7467 . - 0 ID=cds-TGD00646.1;Parent=gene-C9F09_03850;Dbxref=NCBI_GP:TGD00646.1;Name=TGD00646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=C9F09_03850;product=hydroxypyruvate isomerase;protein_id=TGD00646.1;transl_table=11 PYKB01000344.1 Genbank gene 7480 9261 . - . ID=gene-C9F09_03855;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=C9F09_03855 PYKB01000344.1 Protein Homology CDS 7480 9261 . - 0 ID=cds-TGD00647.1;Parent=gene-C9F09_03855;Dbxref=NCBI_GP:TGD00647.1;Name=TGD00647.1;gbkey=CDS;gene=gcl;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=C9F09_03855;product=glyoxylate carboligase;protein_id=TGD00647.1;transl_table=11 PYKB01000344.1 Genbank gene 9346 10164 . - . ID=gene-C9F09_03860;Name=C9F09_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03860 PYKB01000344.1 Protein Homology CDS 9346 10164 . - 0 ID=cds-TGD00648.1;Parent=gene-C9F09_03860;Dbxref=NCBI_GP:TGD00648.1;Name=TGD00648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=C9F09_03860;product=transcriptional regulator;protein_id=TGD00648.1;transl_table=11 PYKB01000344.1 Genbank gene 10243 10725 . - . ID=gene-C9F09_03865;Name=C9F09_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03865 PYKB01000344.1 Protein Homology CDS 10243 10725 . - 0 ID=cds-TGD00649.1;Parent=gene-C9F09_03865;Dbxref=NCBI_GP:TGD00649.1;Name=TGD00649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459510.1;locus_tag=C9F09_03865;product=ureidoglycolate lyase;protein_id=TGD00649.1;transl_table=11 PYKB01000344.1 Genbank gene 10952 11878 . + . ID=gene-C9F09_03870;Name=C9F09_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03870 PYKB01000344.1 Protein Homology CDS 10952 11878 . + 0 ID=cds-TGD00650.1;Parent=gene-C9F09_03870;Dbxref=NCBI_GP:TGD00650.1;Name=TGD00650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=C9F09_03870;product=HTH-type transcriptional activator AllS;protein_id=TGD00650.1;transl_table=11 PYKB01000344.1 Genbank gene 11948 12304 . + . ID=gene-C9F09_03875;Name=C9F09_03875;end_range=12304,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03875;partial=true PYKB01000344.1 Protein Homology CDS 11948 12304 . + 0 ID=cds-TGD00651.1;Parent=gene-C9F09_03875;Dbxref=NCBI_GP:TGD00651.1;Name=TGD00651.1;Note=catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA;end_range=12304,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455108.1;locus_tag=C9F09_03875;partial=true;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=TGD00651.1;transl_table=11 ##sequence-region PYKB01001318.1 1 4383 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001318.1 Genbank region 1 4383 . + . ID=PYKB01001318.1:1..4383;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001318.1 Genbank pseudogene 86 397 . + . ID=gene-C9F09_22655;Name=C9F09_22655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22655;pseudo=true PYKB01001318.1 Protein Homology CDS 86 397 . + 0 ID=cds-C9F09_22655;Parent=gene-C9F09_22655;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313238.1;locus_tag=C9F09_22655;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001318.1 Genbank gene 453 1337 . - . ID=gene-C9F09_22660;Name=C9F09_22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22660 PYKB01001318.1 Protein Homology CDS 453 1337 . - 0 ID=cds-TGC81206.1;Parent=gene-C9F09_22660;Dbxref=NCBI_GP:TGC81206.1;Name=TGC81206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463297.1;locus_tag=C9F09_22660;product=sugar phosphate isomerase/epimerase;protein_id=TGC81206.1;transl_table=11 PYKB01001318.1 Genbank gene 1390 2205 . - . ID=gene-C9F09_22665;Name=C9F09_22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22665 PYKB01001318.1 Protein Homology CDS 1390 2205 . - 0 ID=cds-TGC81207.1;Parent=gene-C9F09_22665;Dbxref=NCBI_GP:TGC81207.1;Name=TGC81207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463296.1;locus_tag=C9F09_22665;product=inosose isomerase;protein_id=TGC81207.1;transl_table=11 PYKB01001318.1 Genbank gene 2366 3592 . - . ID=gene-C9F09_22670;Name=C9F09_22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22670 PYKB01001318.1 Protein Homology CDS 2366 3592 . - 0 ID=cds-TGC81208.1;Parent=gene-C9F09_22670;Dbxref=NCBI_GP:TGC81208.1;Name=TGC81208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463295.1;locus_tag=C9F09_22670;product=MFS transporter;protein_id=TGC81208.1;transl_table=11 PYKB01001318.1 Genbank gene 3665 4383 . - . ID=gene-C9F09_22675;Name=C9F09_22675;end_range=4383,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22675;partial=true PYKB01001318.1 Protein Homology CDS 3665 4383 . - 2 ID=cds-TGC81209.1;Parent=gene-C9F09_22675;Dbxref=NCBI_GP:TGC81209.1;Name=TGC81209.1;end_range=4383,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463294.1;locus_tag=C9F09_22675;partial=true;product=inositol 2-dehydrogenase;protein_id=TGC81209.1;transl_table=11 ##sequence-region PYKB01000578.1 1 4382 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000578.1 Genbank region 1 4382 . + . ID=PYKB01000578.1:1..4382;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000578.1 Genbank pseudogene 39 332 . - . ID=gene-C9F09_08230;Name=C9F09_08230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08230;pseudo=true PYKB01000578.1 Protein Homology CDS 39 332 . - 0 ID=cds-C9F09_08230;Parent=gene-C9F09_08230;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121936.1;locus_tag=C9F09_08230;product=sulfate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 PYKB01000578.1 Genbank gene 490 1281 . - . ID=gene-C9F09_08235;Name=C9F09_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08235 PYKB01000578.1 Protein Homology CDS 490 1281 . - 0 ID=cds-TGC95860.1;Parent=gene-C9F09_08235;Dbxref=NCBI_GP:TGC95860.1;Name=TGC95860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456980.1;locus_tag=C9F09_08235;product=NAD(P)-dependent oxidoreductase;protein_id=TGC95860.1;transl_table=11 PYKB01000578.1 Genbank gene 1529 2428 . - . ID=gene-C9F09_08240;Name=C9F09_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08240 PYKB01000578.1 Protein Homology CDS 1529 2428 . - 0 ID=cds-TGC95861.1;Parent=gene-C9F09_08240;Dbxref=NCBI_GP:TGC95861.1;Name=TGC95861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456981.1;locus_tag=C9F09_08240;product=iron-dependent peroxidase;protein_id=TGC95861.1;transl_table=11 PYKB01000578.1 Genbank gene 2523 3098 . - . ID=gene-C9F09_08245;Name=C9F09_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08245 PYKB01000578.1 Protein Homology CDS 2523 3098 . - 0 ID=cds-TGC95862.1;Parent=gene-C9F09_08245;Dbxref=NCBI_GP:TGC95862.1;Name=TGC95862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456982.1;locus_tag=C9F09_08245;product=RpoE-regulated lipoprotein;protein_id=TGC95862.1;transl_table=11 PYKB01000578.1 Genbank gene 3160 3609 . - . ID=gene-C9F09_08250;Name=C9F09_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08250 PYKB01000578.1 Protein Homology CDS 3160 3609 . - 0 ID=cds-TGC95863.1;Parent=gene-C9F09_08250;Dbxref=NCBI_GP:TGC95863.1;Name=TGC95863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456983.1;locus_tag=C9F09_08250;product=hypothetical protein;protein_id=TGC95863.1;transl_table=11 PYKB01000578.1 Genbank gene 3596 4132 . - . ID=gene-C9F09_08255;Name=C9F09_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08255 PYKB01000578.1 Protein Homology CDS 3596 4132 . - 0 ID=cds-TGC95864.1;Parent=gene-C9F09_08255;Dbxref=NCBI_GP:TGC95864.1;Name=TGC95864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461384.3;locus_tag=C9F09_08255;product=GNAT family acetyltransferase;protein_id=TGC95864.1;transl_table=11 PYKB01000578.1 Genbank gene 4234 4382 . + . ID=gene-C9F09_08260;Name=C9F09_08260;end_range=4382,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08260;partial=true PYKB01000578.1 Protein Homology CDS 4234 4382 . + 0 ID=cds-TGC95865.1;Parent=gene-C9F09_08260;Dbxref=NCBI_GP:TGC95865.1;Name=TGC95865.1;end_range=4382,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456985.1;locus_tag=C9F09_08260;partial=true;product=N-acetylmuramoyl-L-alanine amidase;protein_id=TGC95865.1;transl_table=11 ##sequence-region PYKB01001257.1 1 4376 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001257.1 Genbank region 1 4376 . + . ID=PYKB01001257.1:1..4376;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001257.1 Genbank gene 1 200 . - . ID=gene-C9F09_21485;Name=C9F09_21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21485;partial=true;start_range=.,1 PYKB01001257.1 Protein Homology CDS 1 200 . - 0 ID=cds-TGC82299.1;Parent=gene-C9F09_21485;Dbxref=NCBI_GP:TGC82299.1;Name=TGC82299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=C9F09_21485;partial=true;product=rhamnulose-1-phosphate aldolase;protein_id=TGC82299.1;start_range=.,1;transl_table=11 PYKB01001257.1 Genbank gene 343 1602 . - . ID=gene-C9F09_21490;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=C9F09_21490 PYKB01001257.1 Protein Homology CDS 343 1602 . - 0 ID=cds-TGC82300.1;Parent=gene-C9F09_21490;Dbxref=NCBI_GP:TGC82300.1;Name=TGC82300.1;gbkey=CDS;gene=rhaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=C9F09_21490;product=L-rhamnose isomerase;protein_id=TGC82300.1;transl_table=11 PYKB01001257.1 Genbank gene 1599 3068 . - . ID=gene-C9F09_21495;Name=C9F09_21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21495 PYKB01001257.1 Protein Homology CDS 1599 3068 . - 0 ID=cds-TGC82301.1;Parent=gene-C9F09_21495;Dbxref=NCBI_GP:TGC82301.1;Name=TGC82301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=C9F09_21495;product=rhamnulokinase;protein_id=TGC82301.1;transl_table=11 PYKB01001257.1 Genbank gene 3356 4192 . + . ID=gene-C9F09_21500;Name=C9F09_21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21500 PYKB01001257.1 Protein Homology CDS 3356 4192 . + 0 ID=cds-TGC82302.1;Parent=gene-C9F09_21500;Dbxref=NCBI_GP:TGC82302.1;Name=TGC82302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458002.1;locus_tag=C9F09_21500;product=HTH-type transcriptional activator RhaS;protein_id=TGC82302.1;transl_table=11 ##sequence-region PYKB01001590.1 1 4374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001590.1 Genbank region 1 4374 . + . ID=PYKB01001590.1:1..4374;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001590.1 Genbank gene 1 251 . - . ID=gene-C9F09_27925;Name=C9F09_27925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27925;partial=true;start_range=.,1 PYKB01001590.1 Protein Homology CDS 1 251 . - 0 ID=cds-TGC75075.1;Parent=gene-C9F09_27925;Dbxref=NCBI_GP:TGC75075.1;Name=TGC75075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456442.1;locus_tag=C9F09_27925;partial=true;product=hypothetical protein;protein_id=TGC75075.1;start_range=.,1;transl_table=11 PYKB01001590.1 Genbank gene 252 626 . - . ID=gene-C9F09_27930;Name=C9F09_27930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27930 PYKB01001590.1 Protein Homology CDS 252 626 . - 0 ID=cds-TGC75076.1;Parent=gene-C9F09_27930;Dbxref=NCBI_GP:TGC75076.1;Name=TGC75076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=C9F09_27930;product=CopC domain-containing protein YobA;protein_id=TGC75076.1;transl_table=11 PYKB01001590.1 Genbank gene 764 994 . + . ID=gene-C9F09_27935;Name=C9F09_27935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27935 PYKB01001590.1 Protein Homology CDS 764 994 . + 0 ID=cds-TGC75077.1;Parent=gene-C9F09_27935;Dbxref=NCBI_GP:TGC75077.1;Name=TGC75077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456444.1;locus_tag=C9F09_27935;product=DNA polymerase III subunit theta;protein_id=TGC75077.1;transl_table=11 PYKB01001590.1 Genbank gene 1102 1758 . + . ID=gene-C9F09_27940;Name=C9F09_27940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27940 PYKB01001590.1 Protein Homology CDS 1102 1758 . + 0 ID=cds-TGC75078.1;Parent=gene-C9F09_27940;Dbxref=NCBI_GP:TGC75078.1;Name=TGC75078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=C9F09_27940;product=carbon-nitrogen hydrolase family protein;protein_id=TGC75078.1;transl_table=11 PYKB01001590.1 Genbank gene 1782 2480 . + . ID=gene-C9F09_27945;Name=C9F09_27945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27945 PYKB01001590.1 Protein Homology CDS 1782 2480 . + 0 ID=cds-TGC75079.1;Parent=gene-C9F09_27945;Dbxref=NCBI_GP:TGC75079.1;Name=TGC75079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456446.1;locus_tag=C9F09_27945;product=exodeoxyribonuclease X;protein_id=TGC75079.1;transl_table=11 PYKB01001590.1 Genbank pseudogene 2517 4374 . - . ID=gene-C9F09_27950;Name=C9F09_27950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_27950;pseudo=true PYKB01001590.1 Protein Homology CDS 2517 4374 . - 1 ID=cds-C9F09_27950;Parent=gene-C9F09_27950;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=C9F09_27950;product=oligopeptidase B;pseudo=true;transl_table=11 ##sequence-region PYKB01001024.1 1 4365 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001024.1 Genbank region 1 4365 . + . ID=PYKB01001024.1:1..4365;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001024.1 Genbank gene 69 1058 . + . ID=gene-C9F09_17090;Name=C9F09_17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17090 PYKB01001024.1 Protein Homology CDS 69 1058 . + 0 ID=cds-TGC87726.1;Parent=gene-C9F09_17090;Dbxref=NCBI_GP:TGC87726.1;Name=TGC87726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458022.1;locus_tag=C9F09_17090;product=acetyltransferase;protein_id=TGC87726.1;transl_table=11 PYKB01001024.1 Genbank gene 1073 1519 . - . ID=gene-C9F09_17095;Name=C9F09_17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17095 PYKB01001024.1 Protein Homology CDS 1073 1519 . - 0 ID=cds-TGC87722.1;Parent=gene-C9F09_17095;Dbxref=NCBI_GP:TGC87722.1;Name=TGC87722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458021.1;locus_tag=C9F09_17095;product=type II toxin-antitoxin system HigA family antitoxin;protein_id=TGC87722.1;transl_table=11 PYKB01001024.1 Genbank gene 1516 1827 . - . ID=gene-C9F09_17100;Name=C9F09_17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17100 PYKB01001024.1 Protein Homology CDS 1516 1827 . - 0 ID=cds-TGC87723.1;Parent=gene-C9F09_17100;Dbxref=NCBI_GP:TGC87723.1;Name=TGC87723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=C9F09_17100;product=type II toxin-antitoxin system HigB family toxin;protein_id=TGC87723.1;transl_table=11 PYKB01001024.1 Genbank gene 1913 2842 . - . ID=gene-C9F09_17105;Name=C9F09_17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17105 PYKB01001024.1 Protein Homology CDS 1913 2842 . - 0 ID=cds-TGC87724.1;Parent=gene-C9F09_17105;Dbxref=NCBI_GP:TGC87724.1;Name=TGC87724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=C9F09_17105;product=alpha/beta hydrolase;protein_id=TGC87724.1;transl_table=11 PYKB01001024.1 Genbank gene 3060 3371 . + . ID=gene-C9F09_17110;Name=C9F09_17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17110 PYKB01001024.1 Protein Homology CDS 3060 3371 . + 0 ID=cds-TGC87725.1;Parent=gene-C9F09_17110;Dbxref=NCBI_GP:TGC87725.1;Name=TGC87725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=C9F09_17110;product=toxin HigB-2;protein_id=TGC87725.1;transl_table=11 PYKB01001024.1 Genbank gene 3408 3662 . + . ID=gene-C9F09_17115;Name=C9F09_17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17115 PYKB01001024.1 Protein Homology CDS 3408 3662 . + 0 ID=cds-TGC87727.1;Parent=gene-C9F09_17115;Dbxref=NCBI_GP:TGC87727.1;Name=TGC87727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462913.3;locus_tag=C9F09_17115;product=transcriptional regulator;protein_id=TGC87727.1;transl_table=11 PYKB01001024.1 Genbank pseudogene 3709 4284 . - . ID=gene-C9F09_17120;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=pseudogene;locus_tag=C9F09_17120;pseudo=true PYKB01001024.1 Protein Homology CDS 3709 4284 . - 0 ID=cds-C9F09_17120;Parent=gene-C9F09_17120;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=C9F09_17120;product=formate dehydrogenase accessory protein FdhE;pseudo=true;transl_table=11 ##sequence-region PYKB01001373.1 1 4357 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001373.1 Genbank region 1 4357 . + . ID=PYKB01001373.1:1..4357;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001373.1 Genbank pseudogene 97 540 . - . ID=gene-C9F09_23600;Name=tas;gbkey=Gene;gene=tas;gene_biotype=pseudogene;locus_tag=C9F09_23600;pseudo=true PYKB01001373.1 Protein Homology CDS 97 540 . - 0 ID=cds-C9F09_23600;Parent=gene-C9F09_23600;Note=complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=tas;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527995.1;locus_tag=C9F09_23600;product=NADP(H)-dependent aldo-keto reductase;pseudo=true;transl_table=11 PYKB01001373.1 Genbank gene 731 949 . - . ID=gene-C9F09_23605;Name=C9F09_23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23605 PYKB01001373.1 Protein Homology CDS 731 949 . - 0 ID=cds-TGC80072.1;Parent=gene-C9F09_23605;Dbxref=NCBI_GP:TGC80072.1;Name=TGC80072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=C9F09_23605;product=YgdI/YgdR family lipoprotein;protein_id=TGC80072.1;transl_table=11 PYKB01001373.1 Genbank gene 1119 1832 . - . ID=gene-C9F09_23610;Name=C9F09_23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23610 PYKB01001373.1 Protein Homology CDS 1119 1832 . - 0 ID=cds-TGC80073.1;Parent=gene-C9F09_23610;Dbxref=NCBI_GP:TGC80073.1;Name=TGC80073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457400.1;locus_tag=C9F09_23610;product=TerC family protein;protein_id=TGC80073.1;transl_table=11 PYKB01001373.1 Genbank gene 2014 2709 . - . ID=gene-C9F09_23615;Name=C9F09_23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23615 PYKB01001373.1 Protein Homology CDS 2014 2709 . - 0 ID=cds-TGC80074.1;Parent=gene-C9F09_23615;Dbxref=NCBI_GP:TGC80074.1;Name=TGC80074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=C9F09_23615;product=DNA mismatch repair endonuclease MutH;protein_id=TGC80074.1;transl_table=11 PYKB01001373.1 Genbank gene 3392 3922 . + . ID=gene-C9F09_23620;Name=C9F09_23620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23620 PYKB01001373.1 Protein Homology CDS 3392 3922 . + 0 ID=cds-TGC80075.1;Parent=gene-C9F09_23620;Dbxref=NCBI_GP:TGC80075.1;Name=TGC80075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803569.1;locus_tag=C9F09_23620;product=RNA pyrophosphohydrolase;protein_id=TGC80075.1;transl_table=11 PYKB01001373.1 Genbank pseudogene 3935 4351 . + . ID=gene-C9F09_23625;Name=C9F09_23625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23625;pseudo=true PYKB01001373.1 Protein Homology CDS 3935 4351 . + 0 ID=cds-C9F09_23625;Parent=gene-C9F09_23625;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457397.1;locus_tag=C9F09_23625;product=phosphotransferase;pseudo=true;transl_table=11 ##sequence-region PYKB01001701.1 1 4342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001701.1 Genbank region 1 4342 . + . ID=PYKB01001701.1:1..4342;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001701.1 Genbank pseudogene 16 201 . + . ID=gene-C9F09_29735;Name=C9F09_29735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29735;pseudo=true PYKB01001701.1 Protein Homology CDS 16 201 . + 0 ID=cds-C9F09_29735;Parent=gene-C9F09_29735;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454842.1;locus_tag=C9F09_29735;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001701.1 Genbank gene 257 646 . + . ID=gene-C9F09_29740;Name=C9F09_29740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29740 PYKB01001701.1 Protein Homology CDS 257 646 . + 0 ID=cds-TGC72063.1;Parent=gene-C9F09_29740;Dbxref=NCBI_GP:TGC72063.1;Name=TGC72063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=C9F09_29740;product=VOC family protein;protein_id=TGC72063.1;transl_table=11 PYKB01001701.1 Genbank gene 709 2001 . + . ID=gene-C9F09_29745;Name=C9F09_29745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29745 PYKB01001701.1 Protein Homology CDS 709 2001 . + 0 ID=cds-TGC72064.1;Parent=gene-C9F09_29745;Dbxref=NCBI_GP:TGC72064.1;Name=TGC72064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454844.1;locus_tag=C9F09_29745;product=tRNA lysidine(34) synthetase TilS;protein_id=TGC72064.1;transl_table=11 PYKB01001701.1 Genbank gene 2085 2345 . - . ID=gene-C9F09_29750;Name=C9F09_29750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29750 PYKB01001701.1 Protein Homology CDS 2085 2345 . - 0 ID=cds-TGC72065.1;Parent=gene-C9F09_29750;Dbxref=NCBI_GP:TGC72065.1;Name=TGC72065.1;Note=Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=C9F09_29750;product=Rho-binding antiterminator;protein_id=TGC72065.1;transl_table=11 PYKB01001701.1 Genbank gene 2332 2550 . - . ID=gene-C9F09_29755;Name=C9F09_29755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29755 PYKB01001701.1 Protein Homology CDS 2332 2550 . - 0 ID=cds-TGC72066.1;Parent=gene-C9F09_29755;Dbxref=NCBI_GP:TGC72066.1;Name=TGC72066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454846.1;locus_tag=C9F09_29755;product=hypothetical protein;protein_id=TGC72066.1;transl_table=11 PYKB01001701.1 Genbank gene 2730 3275 . + . ID=gene-C9F09_29760;Name=C9F09_29760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29760 PYKB01001701.1 Protein Homology CDS 2730 3275 . + 0 ID=cds-TGC72067.1;Parent=gene-C9F09_29760;Dbxref=NCBI_GP:TGC72067.1;Name=TGC72067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454847.1;locus_tag=C9F09_29760;product=hypothetical protein;protein_id=TGC72067.1;transl_table=11 PYKB01001701.1 Genbank gene 3272 3694 . + . ID=gene-C9F09_29765;Name=C9F09_29765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29765 PYKB01001701.1 Protein Homology CDS 3272 3694 . + 0 ID=cds-TGC72068.1;Parent=gene-C9F09_29765;Dbxref=NCBI_GP:TGC72068.1;Name=TGC72068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=C9F09_29765;product=aminoacyl-tRNA hydrolase;protein_id=TGC72068.1;transl_table=11 PYKB01001701.1 Genbank gene 3726 4342 . + . ID=gene-C9F09_29770;Name=C9F09_29770;end_range=4342,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29770;partial=true PYKB01001701.1 Protein Homology CDS 3726 4342 . + 0 ID=cds-TGC72069.1;Parent=gene-C9F09_29770;Dbxref=NCBI_GP:TGC72069.1;Name=TGC72069.1;end_range=4342,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454849.1;locus_tag=C9F09_29770;partial=true;product=copper homeostasis/adhesion lipoprotein NlpE;protein_id=TGC72069.1;transl_table=11 ##sequence-region PYKB01000406.1 1 4330 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000406.1 Genbank region 1 4330 . + . ID=PYKB01000406.1:1..4330;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000406.1 Genbank gene 172 720 . + . ID=gene-C9F09_04585;Name=C9F09_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04585 PYKB01000406.1 Protein Homology CDS 172 720 . + 0 ID=cds-TGC99498.1;Parent=gene-C9F09_04585;Dbxref=NCBI_GP:TGC99498.1;Name=TGC99498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=C9F09_04585;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=TGC99498.1;transl_table=11 PYKB01000406.1 Genbank gene 746 1525 . + . ID=gene-C9F09_04590;Name=C9F09_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04590 PYKB01000406.1 Protein Homology CDS 746 1525 . + 0 ID=cds-TGC99499.1;Parent=gene-C9F09_04590;Dbxref=NCBI_GP:TGC99499.1;Name=TGC99499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=C9F09_04590;product=AraC family transcriptional regulator;protein_id=TGC99499.1;transl_table=11 PYKB01000406.1 Genbank gene 1574 1855 . + . ID=gene-C9F09_04595;Name=C9F09_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04595 PYKB01000406.1 Protein Homology CDS 1574 1855 . + 0 ID=cds-TGC99500.1;Parent=gene-C9F09_04595;Dbxref=NCBI_GP:TGC99500.1;Name=TGC99500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455581.1;locus_tag=C9F09_04595;product=acylphosphatase;protein_id=TGC99500.1;transl_table=11 PYKB01000406.1 Genbank gene 1852 2181 . - . ID=gene-C9F09_04600;Name=C9F09_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04600 PYKB01000406.1 Protein Homology CDS 1852 2181 . - 0 ID=cds-TGC99501.1;Parent=gene-C9F09_04600;Dbxref=NCBI_GP:TGC99501.1;Name=TGC99501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455582.1;locus_tag=C9F09_04600;product=sulfurtransferase TusE;protein_id=TGC99501.1;transl_table=11 PYKB01000406.1 Genbank gene 2268 2927 . - . ID=gene-C9F09_04605;Name=C9F09_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04605 PYKB01000406.1 Protein Homology CDS 2268 2927 . - 0 ID=cds-TGC99502.1;Parent=gene-C9F09_04605;Dbxref=NCBI_GP:TGC99502.1;Name=TGC99502.1;Note=binds to the HflBKC complex which modulates FtsH activity;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455583.1;locus_tag=C9F09_04605;product=transmembrane protein;protein_id=TGC99502.1;transl_table=11 PYKB01000406.1 Genbank gene 3322 3409 . + . ID=gene-C9F09_04610;Name=C9F09_04610;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_04610 PYKB01000406.1 tRNAscan-SE tRNA 3322 3409 . + . ID=rna-C9F09_04610;Parent=gene-C9F09_04610;anticodon=(pos:3356..3358);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_04610;product=tRNA-Ser PYKB01000406.1 tRNAscan-SE exon 3322 3409 . + . ID=exon-C9F09_04610-1;Parent=rna-C9F09_04610;anticodon=(pos:3356..3358);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_04610;product=tRNA-Ser PYKB01000406.1 Genbank gene 3546 4226 . - . ID=gene-C9F09_04615;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=C9F09_04615 PYKB01000406.1 Protein Homology CDS 3546 4226 . - 0 ID=cds-TGC99503.1;Parent=gene-C9F09_04615;Dbxref=NCBI_GP:TGC99503.1;Name=TGC99503.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=C9F09_04615;product=type III secretion system effector protease PipA;protein_id=TGC99503.1;transl_table=11 ##sequence-region PYKB01000631.1 1 4329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000631.1 Genbank region 1 4329 . + . ID=PYKB01000631.1:1..4329;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000631.1 Genbank gene 75 2003 . + . ID=gene-C9F09_09355;Name=C9F09_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09355 PYKB01000631.1 Protein Homology CDS 75 2003 . + 0 ID=cds-TGC94763.1;Parent=gene-C9F09_09355;Dbxref=NCBI_GP:TGC94763.1;Name=TGC94763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=C9F09_09355;product=threonine--tRNA ligase;protein_id=TGC94763.1;transl_table=11 PYKB01000631.1 Genbank gene 2007 2549 . + . ID=gene-C9F09_09360;Name=C9F09_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09360 PYKB01000631.1 Protein Homology CDS 2007 2549 . + 0 ID=cds-TGC94764.1;Parent=gene-C9F09_09360;Dbxref=NCBI_GP:TGC94764.1;Name=TGC94764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=C9F09_09360;product=translation initiation factor IF-3;protein_id=TGC94764.1;transl_table=11 PYKB01000631.1 Genbank gene 2645 2842 . + . ID=gene-C9F09_09365;Name=C9F09_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09365 PYKB01000631.1 Protein Homology CDS 2645 2842 . + 0 ID=cds-TGC94765.1;Parent=gene-C9F09_09365;Dbxref=NCBI_GP:TGC94765.1;Name=TGC94765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456177.1;locus_tag=C9F09_09365;product=50S ribosomal protein L35;protein_id=TGC94765.1;transl_table=11 PYKB01000631.1 Genbank gene 2893 3249 . + . ID=gene-C9F09_09370;Name=C9F09_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09370 PYKB01000631.1 Protein Homology CDS 2893 3249 . + 0 ID=cds-TGC94766.1;Parent=gene-C9F09_09370;Dbxref=NCBI_GP:TGC94766.1;Name=TGC94766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=C9F09_09370;product=50S ribosomal protein L20;protein_id=TGC94766.1;transl_table=11 PYKB01000631.1 Genbank gene 3370 3414 . + . ID=gene-C9F09_09375;Name=C9F09_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09375 PYKB01000631.1 Protein Homology CDS 3370 3414 . + 0 ID=cds-TGC94768.1;Parent=gene-C9F09_09375;Dbxref=NCBI_GP:TGC94768.1;Name=TGC94768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002412734.1;locus_tag=C9F09_09375;product=hypothetical protein;protein_id=TGC94768.1;transl_table=11 PYKB01000631.1 Genbank gene 3551 4329 . + . ID=gene-C9F09_09380;Name=C9F09_09380;end_range=4329,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09380;partial=true PYKB01000631.1 Protein Homology CDS 3551 4329 . + 0 ID=cds-TGC94767.1;Parent=gene-C9F09_09380;Dbxref=NCBI_GP:TGC94767.1;Name=TGC94767.1;end_range=4329,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456174.1;locus_tag=C9F09_09380;partial=true;product=phenylalanine--tRNA ligase subunit alpha;protein_id=TGC94767.1;transl_table=11 ##sequence-region PYKB01001071.1 1 4326 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001071.1 Genbank region 1 4326 . + . ID=PYKB01001071.1:1..4326;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001071.1 Genbank gene 1 769 . - . ID=gene-C9F09_17910;Name=C9F09_17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17910;partial=true;start_range=.,1 PYKB01001071.1 Protein Homology CDS 1 769 . - 0 ID=cds-TGC86732.1;Parent=gene-C9F09_17910;Dbxref=NCBI_GP:TGC86732.1;Name=TGC86732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653833.1;locus_tag=C9F09_17910;partial=true;product=2-ketogluconate transporter;protein_id=TGC86732.1;start_range=.,1;transl_table=11 PYKB01001071.1 Genbank gene 1107 2216 . + . ID=gene-C9F09_17915;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=C9F09_17915 PYKB01001071.1 Protein Homology CDS 1107 2216 . + 0 ID=cds-TGC86731.1;Parent=gene-C9F09_17915;Dbxref=NCBI_GP:TGC86731.1;Name=TGC86731.1;Note=forms dimers and octamers%3B involved in conversion of glycerol to dihydroxy-acetone;gbkey=CDS;gene=gldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462431.1;locus_tag=C9F09_17915;product=glycerol dehydrogenase;protein_id=TGC86731.1;transl_table=11 PYKB01001071.1 Genbank gene 2317 3870 . + . ID=gene-C9F09_17920;Name=C9F09_17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17920 PYKB01001071.1 Protein Homology CDS 2317 3870 . + 0 ID=cds-TGC86733.1;Parent=gene-C9F09_17920;Dbxref=NCBI_GP:TGC86733.1;Name=TGC86733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541033.1;locus_tag=C9F09_17920;product=phosphate ABC transporter substrate-binding protein;protein_id=TGC86733.1;transl_table=11 PYKB01001071.1 Genbank pseudogene 3880 4311 . + . ID=gene-C9F09_17925;Name=C9F09_17925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17925;pseudo=true PYKB01001071.1 Protein Homology CDS 3880 4311 . + 0 ID=cds-C9F09_17925;Parent=gene-C9F09_17925;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=C9F09_17925;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001234.1 1 12290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001234.1 Genbank region 1 12290 . + . ID=PYKB01001234.1:1..12290;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001234.1 Genbank pseudogene 20 610 . + . ID=gene-C9F09_20935;Name=C9F09_20935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_20935;pseudo=true PYKB01001234.1 Protein Homology CDS 20 610 . + 0 ID=cds-C9F09_20935;Parent=gene-C9F09_20935;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000334630.1;locus_tag=C9F09_20935;product=DUF159 family protein;pseudo=true;transl_table=11 PYKB01001234.1 Genbank pseudogene 603 752 . - . ID=gene-C9F09_20940;Name=C9F09_20940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_20940;pseudo=true PYKB01001234.1 Protein Homology CDS 603 752 . - 0 ID=cds-C9F09_20940;Parent=gene-C9F09_20940;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000453385.1;locus_tag=C9F09_20940;product=DNA polymerase V;pseudo=true;transl_table=11 PYKB01001234.1 Genbank gene 735 920 . + . ID=gene-C9F09_20945;Name=C9F09_20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20945 PYKB01001234.1 Protein Homology CDS 735 920 . + 0 ID=cds-TGC82807.1;Parent=gene-C9F09_20945;Dbxref=NCBI_GP:TGC82807.1;Name=TGC82807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529180.1;locus_tag=C9F09_20945;product=hypothetical protein;protein_id=TGC82807.1;transl_table=11 PYKB01001234.1 Genbank gene 930 3041 . - . ID=gene-C9F09_20950;Name=sspH1;gbkey=Gene;gene=sspH1;gene_biotype=protein_coding;locus_tag=C9F09_20950 PYKB01001234.1 Protein Homology CDS 930 3041 . - 0 ID=cds-TGC82808.1;Parent=gene-C9F09_20950;Dbxref=NCBI_GP:TGC82808.1;Name=TGC82808.1;gbkey=CDS;gene=sspH1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000481981.1;locus_tag=C9F09_20950;product=type III secretion system effector E3 ubiquitin transferase SspH1;protein_id=TGC82808.1;transl_table=11 PYKB01001234.1 Genbank pseudogene 3213 4089 . - . ID=gene-C9F09_20955;Name=C9F09_20955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_20955;pseudo=true PYKB01001234.1 Protein Homology CDS 3213 4089 . - 0 ID=cds-C9F09_20955;Parent=gene-C9F09_20955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=C9F09_20955;product=IS481 family transposase;pseudo=true;transl_table=11 PYKB01001234.1 Genbank gene 4422 4547 . - . ID=gene-C9F09_20960;Name=C9F09_20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20960 PYKB01001234.1 Protein Homology CDS 4422 4547 . - 0 ID=cds-TGC82809.1;Parent=gene-C9F09_20960;Dbxref=NCBI_GP:TGC82809.1;Name=TGC82809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457876.1;locus_tag=C9F09_20960;product=arsenic transporter;protein_id=TGC82809.1;transl_table=11 PYKB01001234.1 Genbank gene 4810 4926 . + . ID=gene-C9F09_20965;Name=C9F09_20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20965 PYKB01001234.1 Protein Homology CDS 4810 4926 . + 0 ID=cds-TGC82810.1;Parent=gene-C9F09_20965;Dbxref=NCBI_GP:TGC82810.1;Name=TGC82810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525008.1;locus_tag=C9F09_20965;product=phage tail protein;protein_id=TGC82810.1;transl_table=11 PYKB01001234.1 Genbank gene 5117 5317 . + . ID=gene-C9F09_20970;Name=C9F09_20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20970 PYKB01001234.1 Protein Homology CDS 5117 5317 . + 0 ID=cds-TGC82817.1;Parent=gene-C9F09_20970;Dbxref=NCBI_GP:TGC82817.1;Name=TGC82817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460822.1;locus_tag=C9F09_20970;product=phage virulence factor;protein_id=TGC82817.1;transl_table=11 PYKB01001234.1 Genbank gene 5414 5998 . - . ID=gene-C9F09_20975;Name=C9F09_20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20975 PYKB01001234.1 Protein Homology CDS 5414 5998 . - 0 ID=cds-TGC82811.1;Parent=gene-C9F09_20975;Dbxref=NCBI_GP:TGC82811.1;Name=TGC82811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461522.1;locus_tag=C9F09_20975;product=tail fiber assembly protein;protein_id=TGC82811.1;transl_table=11 PYKB01001234.1 Genbank pseudogene 5998 8075 . - . ID=gene-C9F09_20980;Name=C9F09_20980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_20980;pseudo=true PYKB01001234.1 Protein Homology CDS 5998 8075 . - 0 ID=cds-C9F09_20980;Parent=gene-C9F09_20980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460024.1;locus_tag=C9F09_20980;product=phage tail protein;pseudo=true;transl_table=11 PYKB01001234.1 Genbank gene 8186 8581 . + . ID=gene-C9F09_20985;Name=C9F09_20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20985 PYKB01001234.1 Protein Homology CDS 8186 8581 . + 0 ID=cds-TGC82812.1;Parent=gene-C9F09_20985;Dbxref=NCBI_GP:TGC82812.1;Name=TGC82812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456471.1;locus_tag=C9F09_20985;product=hypothetical protein;protein_id=TGC82812.1;transl_table=11 PYKB01001234.1 Genbank gene 8622 9365 . + . ID=gene-C9F09_20990;Name=C9F09_20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20990 PYKB01001234.1 Protein Homology CDS 8622 9365 . + 0 ID=cds-TGC82813.1;Parent=gene-C9F09_20990;Dbxref=NCBI_GP:TGC82813.1;Name=TGC82813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456472.1;locus_tag=C9F09_20990;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=TGC82813.1;transl_table=11 PYKB01001234.1 Genbank gene 9362 10333 . + . ID=gene-C9F09_20995;Name=C9F09_20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20995 PYKB01001234.1 Protein Homology CDS 9362 10333 . + 0 ID=cds-TGC82814.1;Parent=gene-C9F09_20995;Dbxref=NCBI_GP:TGC82814.1;Name=TGC82814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456473.1;locus_tag=C9F09_20995;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=TGC82814.1;transl_table=11 PYKB01001234.1 Genbank gene 10569 11315 . - . ID=gene-C9F09_21000;Name=C9F09_21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21000 PYKB01001234.1 Protein Homology CDS 10569 11315 . - 0 ID=cds-TGC82815.1;Parent=gene-C9F09_21000;Dbxref=NCBI_GP:TGC82815.1;Name=TGC82815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=C9F09_21000;product=copper homeostasis protein CutC;protein_id=TGC82815.1;transl_table=11 PYKB01001234.1 Genbank gene 11335 11904 . - . ID=gene-C9F09_21005;Name=C9F09_21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21005 PYKB01001234.1 Protein Homology CDS 11335 11904 . - 0 ID=cds-TGC82816.1;Parent=gene-C9F09_21005;Dbxref=NCBI_GP:TGC82816.1;Name=TGC82816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456475.1;locus_tag=C9F09_21005;product=VOC family protein;protein_id=TGC82816.1;transl_table=11 PYKB01001234.1 Genbank pseudogene 12141 12206 . + . ID=gene-C9F09_21010;Name=C9F09_21010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21010;pseudo=true PYKB01001234.1 Protein Homology CDS 12141 12206 . + 0 ID=cds-C9F09_21010;Parent=gene-C9F09_21010;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001802165.1;locus_tag=C9F09_21010;product=arginyl-tRNA synthetase;pseudo=true;transl_table=11 ##sequence-region PYKB01000855.1 1 4313 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000855.1 Genbank region 1 4313 . + . ID=PYKB01000855.1:1..4313;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000855.1 Genbank gene 74 1333 . - . ID=gene-C9F09_13605;Name=C9F09_13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13605 PYKB01000855.1 Protein Homology CDS 74 1333 . - 0 ID=cds-TGC91141.1;Parent=gene-C9F09_13605;Dbxref=NCBI_GP:TGC91141.1;Name=TGC91141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=C9F09_13605;product=MFS transporter;protein_id=TGC91141.1;transl_table=11 PYKB01000855.1 Genbank gene 1423 2472 . + . ID=gene-C9F09_13610;Name=C9F09_13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13610 PYKB01000855.1 Protein Homology CDS 1423 2472 . + 0 ID=cds-TGC91142.1;Parent=gene-C9F09_13610;Dbxref=NCBI_GP:TGC91142.1;Name=TGC91142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=C9F09_13610;product=permease;protein_id=TGC91142.1;transl_table=11 PYKB01000855.1 Genbank gene 2524 3102 . + . ID=gene-C9F09_13615;Name=C9F09_13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13615 PYKB01000855.1 Protein Homology CDS 2524 3102 . + 0 ID=cds-TGC91143.1;Parent=gene-C9F09_13615;Dbxref=NCBI_GP:TGC91143.1;Name=TGC91143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458338.1;locus_tag=C9F09_13615;product=4'-phosphopantetheinyl transferase AcpT;protein_id=TGC91143.1;transl_table=11 PYKB01000855.1 Genbank gene 3194 3595 . + . ID=gene-C9F09_13620;Name=C9F09_13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13620 PYKB01000855.1 Protein Homology CDS 3194 3595 . + 0 ID=cds-TGC91144.1;Parent=gene-C9F09_13620;Dbxref=NCBI_GP:TGC91144.1;Name=TGC91144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458337.1;locus_tag=C9F09_13620;product=nickel-responsive transcriptional regulator NikR;protein_id=TGC91144.1;transl_table=11 PYKB01000855.1 Genbank gene 3697 4313 . - . ID=gene-C9F09_13625;Name=C9F09_13625;end_range=4313,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13625;partial=true PYKB01000855.1 Protein Homology CDS 3697 4313 . - 2 ID=cds-TGC91145.1;Parent=gene-C9F09_13625;Dbxref=NCBI_GP:TGC91145.1;Name=TGC91145.1;end_range=4313,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=C9F09_13625;partial=true;product=ABC transporter permease;protein_id=TGC91145.1;transl_table=11 ##sequence-region PYKB01000371.1 1 4313 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000371.1 Genbank region 1 4313 . + . ID=PYKB01000371.1:1..4313;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000371.1 Genbank gene 1 584 . - . ID=gene-C9F09_04205;Name=C9F09_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04205;partial=true;start_range=.,1 PYKB01000371.1 Protein Homology CDS 1 584 . - 0 ID=cds-TGD00088.1;Parent=gene-C9F09_04205;Dbxref=NCBI_GP:TGD00088.1;Name=TGD00088.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=C9F09_04205;partial=true;product=potassium-transporting ATPase subunit B;protein_id=TGD00088.1;start_range=.,1;transl_table=11 PYKB01000371.1 Genbank gene 605 2284 . - . ID=gene-C9F09_04210;Name=C9F09_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04210 PYKB01000371.1 Protein Homology CDS 605 2284 . - 0 ID=cds-TGD00089.1;Parent=gene-C9F09_04210;Dbxref=NCBI_GP:TGD00089.1;Name=TGD00089.1;Note=catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455266.1;locus_tag=C9F09_04210;product=potassium-transporting ATPase subunit KdpA;protein_id=TGD00089.1;transl_table=11 PYKB01000371.1 Genbank gene 2284 2373 . - . ID=gene-C9F09_04215;Name=C9F09_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04215 PYKB01000371.1 Protein Homology CDS 2284 2373 . - 0 ID=cds-TGD00090.1;Parent=gene-C9F09_04215;Dbxref=NCBI_GP:TGD00090.1;Name=TGD00090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=C9F09_04215;product=potassium-transporting ATPase subunit F;protein_id=TGD00090.1;transl_table=11 PYKB01000371.1 Genbank gene 2710 2916 . + . ID=gene-C9F09_04220;Name=C9F09_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04220 PYKB01000371.1 Protein Homology CDS 2710 2916 . + 0 ID=cds-TGD00091.1;Parent=gene-C9F09_04220;Dbxref=NCBI_GP:TGD00091.1;Name=TGD00091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455267.1;locus_tag=C9F09_04220;product=DUF2517 domain-containing protein;protein_id=TGD00091.1;transl_table=11 PYKB01000371.1 Genbank gene 3027 4313 . + . ID=gene-C9F09_04225;Name=C9F09_04225;end_range=4313,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04225;partial=true PYKB01000371.1 Protein Homology CDS 3027 4313 . + 0 ID=cds-TGD00092.1;Parent=gene-C9F09_04225;Dbxref=NCBI_GP:TGD00092.1;Name=TGD00092.1;end_range=4313,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=C9F09_04225;partial=true;product=deoxyribodipyrimidine photo-lyase;protein_id=TGD00092.1;transl_table=11 ##sequence-region PYKB01001042.1 1 4303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001042.1 Genbank region 1 4303 . + . ID=PYKB01001042.1:1..4303;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001042.1 Genbank gene 24 950 . - . ID=gene-C9F09_17490;Name=C9F09_17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17490 PYKB01001042.1 Protein Homology CDS 24 950 . - 0 ID=cds-TGC87332.1;Parent=gene-C9F09_17490;Dbxref=NCBI_GP:TGC87332.1;Name=TGC87332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176636.1;locus_tag=C9F09_17490;product=LysR family transcriptional regulator;protein_id=TGC87332.1;transl_table=11 PYKB01001042.1 Genbank gene 1106 1321 . + . ID=gene-C9F09_17495;Name=C9F09_17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17495 PYKB01001042.1 Protein Homology CDS 1106 1321 . + 0 ID=cds-TGC87333.1;Parent=gene-C9F09_17495;Dbxref=NCBI_GP:TGC87333.1;Name=TGC87333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496898.1;locus_tag=C9F09_17495;product=hypothetical protein;protein_id=TGC87333.1;transl_table=11 PYKB01001042.1 Genbank gene 1958 2245 . - . ID=gene-C9F09_17500;Name=C9F09_17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17500 PYKB01001042.1 Protein Homology CDS 1958 2245 . - 0 ID=cds-TGC87334.1;Parent=gene-C9F09_17500;Dbxref=NCBI_GP:TGC87334.1;Name=TGC87334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=C9F09_17500;product=acyl carrier protein;protein_id=TGC87334.1;transl_table=11 PYKB01001042.1 Genbank pseudogene 2351 2554 . + . ID=gene-C9F09_17505;Name=C9F09_17505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17505;pseudo=true PYKB01001042.1 Protein Homology CDS 2351 2554 . + 0 ID=cds-C9F09_17505;Parent=gene-C9F09_17505;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001567368.1;locus_tag=C9F09_17505;product=ISNCY family transposase;pseudo=true;transl_table=11 PYKB01001042.1 Genbank gene 2729 3784 . - . ID=gene-C9F09_17510;Name=C9F09_17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17510 PYKB01001042.1 Protein Homology CDS 2729 3784 . - 0 ID=cds-TGC87335.1;Parent=gene-C9F09_17510;Dbxref=NCBI_GP:TGC87335.1;Name=TGC87335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511676.1;locus_tag=C9F09_17510;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=TGC87335.1;transl_table=11 PYKB01001042.1 Genbank gene 3881 4291 . - . ID=gene-C9F09_17515;Name=C9F09_17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17515 PYKB01001042.1 Protein Homology CDS 3881 4291 . - 0 ID=cds-TGC87336.1;Parent=gene-C9F09_17515;Dbxref=NCBI_GP:TGC87336.1;Name=TGC87336.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01975.15;locus_tag=C9F09_17515;product=hypothetical protein;protein_id=TGC87336.1;transl_table=11 ##sequence-region PYKB01000017.1 1 4297 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000017.1 Genbank region 1 4297 . + . ID=PYKB01000017.1:1..4297;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000017.1 Genbank gene 1 457 . + . ID=gene-C9F09_00185;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;gene_synonym=trmC,yfcK;locus_tag=C9F09_00185;partial=true;start_range=.,1 PYKB01000017.1 Protein Homology CDS 1 457 . + 1 ID=cds-TGD07039.1;Parent=gene-C9F09_00185;Dbxref=NCBI_GP:TGD07039.1;Name=TGD07039.1;Note=5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme;gbkey=CDS;gene=mnmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461321.3;locus_tag=C9F09_00185;partial=true;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=TGD07039.1;start_range=.,1;transl_table=11 PYKB01000017.1 Genbank gene 509 784 . - . ID=gene-C9F09_00190;Name=C9F09_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00190 PYKB01000017.1 Protein Homology CDS 509 784 . - 0 ID=cds-TGD07040.1;Parent=gene-C9F09_00190;Dbxref=NCBI_GP:TGD07040.1;Name=TGD07040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456922.1;locus_tag=C9F09_00190;product=YfcL family protein;protein_id=TGD07040.1;transl_table=11 PYKB01000017.1 Genbank gene 817 1365 . - . ID=gene-C9F09_00195;Name=C9F09_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00195 PYKB01000017.1 Protein Homology CDS 817 1365 . - 0 ID=cds-TGD07041.1;Parent=gene-C9F09_00195;Dbxref=NCBI_GP:TGD07041.1;Name=TGD07041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=C9F09_00195;product=elongation factor P hydroxylase;protein_id=TGD07041.1;transl_table=11 PYKB01000017.1 Genbank gene 1365 2174 . - . ID=gene-C9F09_00200;Name=C9F09_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00200 PYKB01000017.1 Protein Homology CDS 1365 2174 . - 0 ID=cds-TGD07042.1;Parent=gene-C9F09_00200;Dbxref=NCBI_GP:TGD07042.1;Name=TGD07042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456923.1;locus_tag=C9F09_00200;product=hypothetical protein;protein_id=TGD07042.1;transl_table=11 PYKB01000017.1 Genbank gene 2174 2998 . - . ID=gene-C9F09_00205;Name=C9F09_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00205 PYKB01000017.1 Protein Homology CDS 2174 2998 . - 0 ID=cds-TGD07043.1;Parent=gene-C9F09_00205;Dbxref=NCBI_GP:TGD07043.1;Name=TGD07043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=C9F09_00205;product=penicillin-insensitive murein endopeptidase;protein_id=TGD07043.1;transl_table=11 PYKB01000017.1 Genbank gene 3002 4087 . - . ID=gene-C9F09_00210;Name=C9F09_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00210 PYKB01000017.1 Protein Homology CDS 3002 4087 . - 0 ID=cds-TGD07044.1;Parent=gene-C9F09_00210;Dbxref=NCBI_GP:TGD07044.1;Name=TGD07044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=C9F09_00210;product=chorismate synthase;protein_id=TGD07044.1;transl_table=11 ##sequence-region PYKB01001557.1 1 4284 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001557.1 Genbank region 1 4284 . + . ID=PYKB01001557.1:1..4284;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001557.1 Genbank gene 1 213 . - . ID=gene-C9F09_27200;Name=C9F09_27200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27200;partial=true;start_range=.,1 PYKB01001557.1 Protein Homology CDS 1 213 . - 0 ID=cds-TGC75895.1;Parent=gene-C9F09_27200;Dbxref=NCBI_GP:TGC75895.1;Name=TGC75895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456552.1;locus_tag=C9F09_27200;partial=true;product=hydrolase;protein_id=TGC75895.1;start_range=.,1;transl_table=11 PYKB01001557.1 Genbank gene 293 604 . - . ID=gene-C9F09_27205;Name=C9F09_27205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27205 PYKB01001557.1 Protein Homology CDS 293 604 . - 0 ID=cds-TGC75896.1;Parent=gene-C9F09_27205;Dbxref=NCBI_GP:TGC75896.1;Name=TGC75896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456553.1;locus_tag=C9F09_27205;product=hypothetical protein;protein_id=TGC75896.1;transl_table=11 PYKB01001557.1 Genbank gene 1254 2450 . + . ID=gene-C9F09_27210;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=C9F09_27210 PYKB01001557.1 Protein Homology CDS 1254 2450 . + 0 ID=cds-TGC75897.1;Parent=gene-C9F09_27210;Dbxref=NCBI_GP:TGC75897.1;Name=TGC75897.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=C9F09_27210;product=porin OmpS1;protein_id=TGC75897.1;transl_table=11 PYKB01001557.1 Genbank gene 2708 2896 . - . ID=gene-C9F09_27215;Name=C9F09_27215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27215 PYKB01001557.1 Protein Homology CDS 2708 2896 . - 0 ID=cds-TGC75899.1;Parent=gene-C9F09_27215;Dbxref=NCBI_GP:TGC75899.1;Name=TGC75899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101558.1;locus_tag=C9F09_27215;product=cold-shock protein;protein_id=TGC75899.1;transl_table=11 PYKB01001557.1 Genbank gene 2907 3119 . - . ID=gene-C9F09_27220;Name=C9F09_27220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27220 PYKB01001557.1 Protein Homology CDS 2907 3119 . - 0 ID=cds-TGC75898.1;Parent=gene-C9F09_27220;Dbxref=NCBI_GP:TGC75898.1;Name=TGC75898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=C9F09_27220;product=cold-shock protein CspJ;protein_id=TGC75898.1;transl_table=11 PYKB01001557.1 Genbank pseudogene 3698 4284 . - . ID=gene-C9F09_27225;Name=C9F09_27225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_27225;pseudo=true PYKB01001557.1 Protein Homology CDS 3698 4284 . - 1 ID=cds-C9F09_27225;Parent=gene-C9F09_27225;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=C9F09_27225;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region PYKB01001157.1 1 4265 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001157.1 Genbank region 1 4265 . + . ID=PYKB01001157.1:1..4265;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001157.1 Genbank pseudogene 25 657 . - . ID=gene-C9F09_19560;Name=C9F09_19560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_19560;pseudo=true PYKB01001157.1 Protein Homology CDS 25 657 . - 0 ID=cds-C9F09_19560;Parent=gene-C9F09_19560;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458406.1;locus_tag=C9F09_19560;product=Hsp33 family molecular chaperone HslO;pseudo=true;transl_table=11 PYKB01001157.1 Genbank gene 682 1083 . - . ID=gene-C9F09_19565;Name=C9F09_19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19565 PYKB01001157.1 Protein Homology CDS 682 1083 . - 0 ID=cds-TGC84581.1;Parent=gene-C9F09_19565;Dbxref=NCBI_GP:TGC84581.1;Name=TGC84581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=C9F09_19565;product=ribosome-associated heat shock protein Hsp15;protein_id=TGC84581.1;transl_table=11 PYKB01001157.1 Genbank gene 1094 1762 . - . ID=gene-C9F09_19570;Name=C9F09_19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19570 PYKB01001157.1 Protein Homology CDS 1094 1762 . - 0 ID=cds-TGC84582.1;Parent=gene-C9F09_19570;Dbxref=NCBI_GP:TGC84582.1;Name=TGC84582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=C9F09_19570;product=GMP/IMP nucleotidase;protein_id=TGC84582.1;transl_table=11 PYKB01001157.1 Genbank gene 1827 3959 . - . ID=gene-C9F09_19575;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=C9F09_19575 PYKB01001157.1 Protein Homology CDS 1827 3959 . - 0 ID=cds-TGC84583.1;Parent=gene-C9F09_19575;Dbxref=NCBI_GP:TGC84583.1;Name=TGC84583.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458409.1;locus_tag=C9F09_19575;product=intracellular growth attenuator protein IgaA;protein_id=TGC84583.1;transl_table=11 ##sequence-region PYKB01000582.1 1 4255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000582.1 Genbank region 1 4255 . + . ID=PYKB01000582.1:1..4255;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000582.1 Genbank gene 1 237 . - . ID=gene-C9F09_08325;Name=C9F09_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08325;partial=true;start_range=.,1 PYKB01000582.1 Protein Homology CDS 1 237 . - 0 ID=cds-TGC95773.1;Parent=gene-C9F09_08325;Dbxref=NCBI_GP:TGC95773.1;Name=TGC95773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457279.1;locus_tag=C9F09_08325;partial=true;product=hypothetical protein;protein_id=TGC95773.1;start_range=.,1;transl_table=11 PYKB01000582.1 Genbank gene 240 737 . - . ID=gene-C9F09_08330;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=C9F09_08330 PYKB01000582.1 Protein Homology CDS 240 737 . - 0 ID=cds-TGC95774.1;Parent=gene-C9F09_08330;Dbxref=NCBI_GP:TGC95774.1;Name=TGC95774.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457280.1;locus_tag=C9F09_08330;product=type III secretion system translocator chaperone SicA;protein_id=TGC95774.1;transl_table=11 PYKB01000582.1 Genbank gene 875 1945 . - . ID=gene-C9F09_08335;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=C9F09_08335 PYKB01000582.1 Protein Homology CDS 875 1945 . - 0 ID=cds-TGC95775.1;Parent=gene-C9F09_08335;Dbxref=NCBI_GP:TGC95775.1;Name=TGC95775.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457281.1;locus_tag=C9F09_08335;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=TGC95775.1;transl_table=11 PYKB01000582.1 Genbank gene 1932 2723 . - . ID=gene-C9F09_08340;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=C9F09_08340 PYKB01000582.1 Protein Homology CDS 1932 2723 . - 0 ID=cds-TGC95776.1;Parent=gene-C9F09_08340;Dbxref=NCBI_GP:TGC95776.1;Name=TGC95776.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=C9F09_08340;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=TGC95776.1;transl_table=11 PYKB01000582.1 Genbank gene 2727 2987 . - . ID=gene-C9F09_08345;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=C9F09_08345 PYKB01000582.1 Protein Homology CDS 2727 2987 . - 0 ID=cds-TGC95777.1;Parent=gene-C9F09_08345;Dbxref=NCBI_GP:TGC95777.1;Name=TGC95777.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457283.1;locus_tag=C9F09_08345;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=TGC95777.1;transl_table=11 PYKB01000582.1 Genbank gene 3013 3687 . - . ID=gene-C9F09_08350;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=C9F09_08350 PYKB01000582.1 Protein Homology CDS 3013 3687 . - 0 ID=cds-TGC95778.1;Parent=gene-C9F09_08350;Dbxref=NCBI_GP:TGC95778.1;Name=TGC95778.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=C9F09_08350;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=TGC95778.1;transl_table=11 PYKB01000582.1 Genbank gene 3677 4255 . - . ID=gene-C9F09_08355;Name=spaO;end_range=4255,.;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=C9F09_08355;partial=true PYKB01000582.1 Protein Homology CDS 3677 4255 . - 0 ID=cds-TGC95779.1;Parent=gene-C9F09_08355;Dbxref=NCBI_GP:TGC95779.1;Name=TGC95779.1;end_range=4255,.;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=C9F09_08355;partial=true;product=SPI-1 type III secretion system protein SpaO;protein_id=TGC95779.1;transl_table=11 ##sequence-region PYKB01001427.1 1 4253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001427.1 Genbank region 1 4253 . + . ID=PYKB01001427.1:1..4253;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001427.1 Genbank gene 250 1935 . + . ID=gene-C9F09_24540;Name=C9F09_24540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24540 PYKB01001427.1 Protein Homology CDS 250 1935 . + 0 ID=cds-TGC78859.1;Parent=gene-C9F09_24540;Dbxref=NCBI_GP:TGC78859.1;Name=TGC78859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=C9F09_24540;product=sensor histidine kinase;protein_id=TGC78859.1;transl_table=11 PYKB01001427.1 Genbank gene 1932 2651 . + . ID=gene-C9F09_24545;Name=C9F09_24545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24545 PYKB01001427.1 Protein Homology CDS 1932 2651 . + 0 ID=cds-TGC78855.1;Parent=gene-C9F09_24545;Dbxref=NCBI_GP:TGC78855.1;Name=TGC78855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=C9F09_24545;product=two-component system response regulator YehT;protein_id=TGC78855.1;transl_table=11 PYKB01001427.1 Genbank gene 2698 3165 . + . ID=gene-C9F09_24550;Name=C9F09_24550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24550 PYKB01001427.1 Protein Homology CDS 2698 3165 . + 0 ID=cds-TGC78856.1;Parent=gene-C9F09_24550;Dbxref=NCBI_GP:TGC78856.1;Name=TGC78856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456717.1;locus_tag=C9F09_24550;product=DUF1456 domain-containing protein;protein_id=TGC78856.1;transl_table=11 PYKB01001427.1 Genbank gene 3222 3752 . - . ID=gene-C9F09_24555;Name=C9F09_24555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24555 PYKB01001427.1 Protein Homology CDS 3222 3752 . - 0 ID=cds-TGC78857.1;Parent=gene-C9F09_24555;Dbxref=NCBI_GP:TGC78857.1;Name=TGC78857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456716.1;locus_tag=C9F09_24555;product=hypothetical protein;protein_id=TGC78857.1;transl_table=11 PYKB01001427.1 Genbank gene 3924 4253 . - . ID=gene-C9F09_24560;Name=C9F09_24560;end_range=4253,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24560;partial=true PYKB01001427.1 Protein Homology CDS 3924 4253 . - 0 ID=cds-TGC78858.1;Parent=gene-C9F09_24560;Dbxref=NCBI_GP:TGC78858.1;Name=TGC78858.1;end_range=4253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456715.1;locus_tag=C9F09_24560;partial=true;product=DUF1307 domain-containing protein;protein_id=TGC78858.1;transl_table=11 ##sequence-region PYKB01001516.1 1 4250 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001516.1 Genbank region 1 4250 . + . ID=PYKB01001516.1:1..4250;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001516.1 Genbank gene 1 197 . - . ID=gene-C9F09_26280;Name=C9F09_26280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26280;partial=true;start_range=.,1 PYKB01001516.1 Protein Homology CDS 1 197 . - 0 ID=cds-TGC76846.1;Parent=gene-C9F09_26280;Dbxref=NCBI_GP:TGC76846.1;Name=TGC76846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=C9F09_26280;partial=true;product=MFS transporter;protein_id=TGC76846.1;start_range=.,1;transl_table=11 PYKB01001516.1 Genbank gene 361 1731 . - . ID=gene-C9F09_26285;Name=C9F09_26285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26285 PYKB01001516.1 Protein Homology CDS 361 1731 . - 0 ID=cds-TGC76843.1;Parent=gene-C9F09_26285;Dbxref=NCBI_GP:TGC76843.1;Name=TGC76843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454764.1;locus_tag=C9F09_26285;product=aromatic amino acid transporter AroP;protein_id=TGC76843.1;transl_table=11 PYKB01001516.1 Genbank gene 2297 3061 . + . ID=gene-C9F09_26290;Name=C9F09_26290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26290 PYKB01001516.1 Protein Homology CDS 2297 3061 . + 0 ID=cds-TGC76844.1;Parent=gene-C9F09_26290;Dbxref=NCBI_GP:TGC76844.1;Name=TGC76844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454765.1;locus_tag=C9F09_26290;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=TGC76844.1;transl_table=11 PYKB01001516.1 Genbank gene 3112 3348 . + . ID=gene-C9F09_26295;Name=C9F09_26295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26295 PYKB01001516.1 Protein Homology CDS 3112 3348 . + 0 ID=cds-TGC76845.1;Parent=gene-C9F09_26295;Dbxref=NCBI_GP:TGC76845.1;Name=TGC76845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001726847.1;locus_tag=C9F09_26295;product=hypothetical protein;protein_id=TGC76845.1;transl_table=11 PYKB01001516.1 Genbank pseudogene 3368 4186 . + . ID=gene-C9F09_26300;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=pseudogene;locus_tag=C9F09_26300;pseudo=true PYKB01001516.1 Protein Homology CDS 3368 4186 . + 0 ID=cds-C9F09_26300;Parent=gene-C9F09_26300;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=aceE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454766.1;locus_tag=C9F09_26300;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;pseudo=true;transl_table=11 ##sequence-region PYKB01001105.1 1 4239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001105.1 Genbank region 1 4239 . + . ID=PYKB01001105.1:1..4239;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001105.1 Genbank gene 2 400 . + . ID=gene-C9F09_18495;Name=C9F09_18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18495 PYKB01001105.1 Protein Homology CDS 2 400 . + 0 ID=cds-TGC85891.1;Parent=gene-C9F09_18495;Dbxref=NCBI_GP:TGC85891.1;Name=TGC85891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805083.1;locus_tag=C9F09_18495;product=hypothetical protein;protein_id=TGC85891.1;transl_table=11 PYKB01001105.1 Genbank gene 472 717 . - . ID=gene-C9F09_18500;Name=C9F09_18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18500 PYKB01001105.1 Protein Homology CDS 472 717 . - 0 ID=cds-TGC85892.1;Parent=gene-C9F09_18500;Dbxref=NCBI_GP:TGC85892.1;Name=TGC85892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994230.1;locus_tag=C9F09_18500;product=hypothetical protein;protein_id=TGC85892.1;transl_table=11 PYKB01001105.1 Genbank gene 1350 1490 . + . ID=gene-C9F09_18505;Name=C9F09_18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18505 PYKB01001105.1 Protein Homology CDS 1350 1490 . + 0 ID=cds-TGC85893.1;Parent=gene-C9F09_18505;Dbxref=NCBI_GP:TGC85893.1;Name=TGC85893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539111.1;locus_tag=C9F09_18505;product=type IV secretion protein Rhs;protein_id=TGC85893.1;transl_table=11 PYKB01001105.1 Genbank pseudogene 1794 2043 . + . ID=gene-C9F09_18510;Name=C9F09_18510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18510;pseudo=true PYKB01001105.1 Protein Homology CDS 1794 2043 . + 0 ID=cds-C9F09_18510;Parent=gene-C9F09_18510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000918610.1;locus_tag=C9F09_18510;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001105.1 Genbank gene 2162 2629 . + . ID=gene-C9F09_18515;Name=C9F09_18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18515 PYKB01001105.1 Protein Homology CDS 2162 2629 . + 0 ID=cds-TGC85894.1;Parent=gene-C9F09_18515;Dbxref=NCBI_GP:TGC85894.1;Name=TGC85894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828176.1;locus_tag=C9F09_18515;product=sugar tyrosine-protein kinase;protein_id=TGC85894.1;transl_table=11 PYKB01001105.1 Genbank pseudogene 2665 2825 . + . ID=gene-C9F09_18520;Name=C9F09_18520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18520;pseudo=true PYKB01001105.1 Protein Homology CDS 2665 2825 . + 0 ID=cds-C9F09_18520;Parent=gene-C9F09_18520;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887049.1;locus_tag=C9F09_18520;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 PYKB01001105.1 Genbank gene 2947 3225 . + . ID=gene-C9F09_18525;Name=C9F09_18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18525 PYKB01001105.1 Protein Homology CDS 2947 3225 . + 0 ID=cds-TGC85896.1;Parent=gene-C9F09_18525;Dbxref=NCBI_GP:TGC85896.1;Name=TGC85896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=C9F09_18525;product=hypothetical protein;protein_id=TGC85896.1;transl_table=11 PYKB01001105.1 Genbank gene 3292 3606 . - . ID=gene-C9F09_18530;Name=C9F09_18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18530 PYKB01001105.1 Protein Homology CDS 3292 3606 . - 0 ID=cds-TGC85895.1;Parent=gene-C9F09_18530;Dbxref=NCBI_GP:TGC85895.1;Name=TGC85895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233128.1;locus_tag=C9F09_18530;product=type I toxin-antitoxin system SymE family toxin;protein_id=TGC85895.1;transl_table=11 PYKB01001105.1 Genbank pseudogene 3659 4239 . + . ID=gene-C9F09_18535;Name=C9F09_18535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18535;pseudo=true PYKB01001105.1 Protein Homology CDS 3659 4239 . + 0 ID=cds-C9F09_18535;Parent=gene-C9F09_18535;Note=frameshifted%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=C9F09_18535;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000589.1 1 12124 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000589.1 Genbank region 1 12124 . + . ID=PYKB01000589.1:1..12124;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000589.1 Genbank pseudogene 1 852 . + . ID=gene-C9F09_08520;Name=C9F09_08520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08520;pseudo=true PYKB01000589.1 Protein Homology CDS 1 852 . + 0 ID=cds-C9F09_08520;Parent=gene-C9F09_08520;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=C9F09_08520;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000589.1 Genbank gene 857 1576 . + . ID=gene-C9F09_08525;Name=C9F09_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08525 PYKB01000589.1 Protein Homology CDS 857 1576 . + 0 ID=cds-TGC95546.1;Parent=gene-C9F09_08525;Dbxref=NCBI_GP:TGC95546.1;Name=TGC95546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456682.1;locus_tag=C9F09_08525;product=hypothetical protein;protein_id=TGC95546.1;transl_table=11 PYKB01000589.1 Genbank gene 1707 2444 . - . ID=gene-C9F09_08530;Name=C9F09_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08530 PYKB01000589.1 Protein Homology CDS 1707 2444 . - 0 ID=cds-TGC95547.1;Parent=gene-C9F09_08530;Dbxref=NCBI_GP:TGC95547.1;Name=TGC95547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497704.1;locus_tag=C9F09_08530;product=hypothetical protein;protein_id=TGC95547.1;transl_table=11 PYKB01000589.1 Genbank gene 2554 2760 . - . ID=gene-C9F09_08535;Name=C9F09_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08535 PYKB01000589.1 Protein Homology CDS 2554 2760 . - 0 ID=cds-TGC95548.1;Parent=gene-C9F09_08535;Dbxref=NCBI_GP:TGC95548.1;Name=TGC95548.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12759.5;locus_tag=C9F09_08535;product=hypothetical protein;protein_id=TGC95548.1;transl_table=11 PYKB01000589.1 Genbank gene 2899 3273 . - . ID=gene-C9F09_08540;Name=C9F09_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08540 PYKB01000589.1 Protein Homology CDS 2899 3273 . - 0 ID=cds-TGC95557.1;Parent=gene-C9F09_08540;Dbxref=NCBI_GP:TGC95557.1;Name=TGC95557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540396.1;locus_tag=C9F09_08540;product=hypothetical protein;protein_id=TGC95557.1;transl_table=11 PYKB01000589.1 Genbank gene 3591 3968 . - . ID=gene-C9F09_08545;Name=C9F09_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08545 PYKB01000589.1 Protein Homology CDS 3591 3968 . - 0 ID=cds-TGC95549.1;Parent=gene-C9F09_08545;Dbxref=NCBI_GP:TGC95549.1;Name=TGC95549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000357876.1;locus_tag=C9F09_08545;product=hypothetical protein;protein_id=TGC95549.1;transl_table=11 PYKB01000589.1 Genbank gene 4337 4771 . - . ID=gene-C9F09_08550;Name=C9F09_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08550 PYKB01000589.1 Protein Homology CDS 4337 4771 . - 0 ID=cds-TGC95550.1;Parent=gene-C9F09_08550;Dbxref=NCBI_GP:TGC95550.1;Name=TGC95550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001213035.1;locus_tag=C9F09_08550;product=sel1 repeat family protein;protein_id=TGC95550.1;transl_table=11 PYKB01000589.1 Genbank gene 4976 5842 . - . ID=gene-C9F09_08555;Name=C9F09_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08555 PYKB01000589.1 Protein Homology CDS 4976 5842 . - 0 ID=cds-TGC95551.1;Parent=gene-C9F09_08555;Dbxref=NCBI_GP:TGC95551.1;Name=TGC95551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864146.1;locus_tag=C9F09_08555;product=lyase;protein_id=TGC95551.1;transl_table=11 PYKB01000589.1 Genbank gene 6052 6285 . - . ID=gene-C9F09_08560;Name=C9F09_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08560 PYKB01000589.1 Protein Homology CDS 6052 6285 . - 0 ID=cds-TGC95552.1;Parent=gene-C9F09_08560;Dbxref=NCBI_GP:TGC95552.1;Name=TGC95552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517986.1;locus_tag=C9F09_08560;product=type IV secretion protein Rhs;protein_id=TGC95552.1;transl_table=11 PYKB01000589.1 Genbank pseudogene 6349 6681 . - . ID=gene-C9F09_08565;Name=C9F09_08565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08565;pseudo=true PYKB01000589.1 Protein Homology CDS 6349 6681 . - 0 ID=cds-C9F09_08565;Parent=gene-C9F09_08565;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001102017.1;locus_tag=C9F09_08565;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000589.1 Genbank gene 6697 7077 . - . ID=gene-C9F09_08570;Name=C9F09_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08570 PYKB01000589.1 Protein Homology CDS 6697 7077 . - 0 ID=cds-TGC95558.1;Parent=gene-C9F09_08570;Dbxref=NCBI_GP:TGC95558.1;Name=TGC95558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540399.1;locus_tag=C9F09_08570;product=hypothetical protein;protein_id=TGC95558.1;transl_table=11 PYKB01000589.1 Genbank pseudogene 7155 7873 . - . ID=gene-C9F09_08575;Name=C9F09_08575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08575;pseudo=true PYKB01000589.1 Protein Homology CDS 7155 7873 . - 0 ID=cds-C9F09_08575;Parent=gene-C9F09_08575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016237170.1;locus_tag=C9F09_08575;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 PYKB01000589.1 Genbank gene 7927 8250 . - . ID=gene-C9F09_08580;Name=C9F09_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08580 PYKB01000589.1 GeneMarkS+ CDS 7927 8250 . - 0 ID=cds-TGC95553.1;Parent=gene-C9F09_08580;Dbxref=NCBI_GP:TGC95553.1;Name=TGC95553.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_08580;product=hypothetical protein;protein_id=TGC95553.1;transl_table=11 PYKB01000589.1 Genbank pseudogene 8366 8672 . - . ID=gene-C9F09_08585;Name=C9F09_08585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08585;pseudo=true PYKB01000589.1 Protein Homology CDS 8366 8672 . - 0 ID=cds-C9F09_08585;Parent=gene-C9F09_08585;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001745722.1;locus_tag=C9F09_08585;product=ISAs1 family transposase;pseudo=true;transl_table=11 PYKB01000589.1 Genbank gene 9063 9506 . - . ID=gene-C9F09_08590;Name=C9F09_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08590 PYKB01000589.1 Protein Homology CDS 9063 9506 . - 0 ID=cds-TGC95554.1;Parent=gene-C9F09_08590;Dbxref=NCBI_GP:TGC95554.1;Name=TGC95554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646715.1;locus_tag=C9F09_08590;product=hypothetical protein;protein_id=TGC95554.1;transl_table=11 PYKB01000589.1 Genbank gene 10053 10472 . - . ID=gene-C9F09_08595;Name=C9F09_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08595 PYKB01000589.1 Protein Homology CDS 10053 10472 . - 0 ID=cds-TGC95555.1;Parent=gene-C9F09_08595;Dbxref=NCBI_GP:TGC95555.1;Name=TGC95555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502176.1;locus_tag=C9F09_08595;product=hypothetical protein;protein_id=TGC95555.1;transl_table=11 PYKB01000589.1 Genbank pseudogene 10906 11102 . - . ID=gene-C9F09_08600;Name=C9F09_08600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08600;pseudo=true PYKB01000589.1 Protein Homology CDS 10906 11102 . - 0 ID=cds-C9F09_08600;Parent=gene-C9F09_08600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497696.1;locus_tag=C9F09_08600;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000589.1 Genbank gene 11127 11744 . - . ID=gene-C9F09_08605;Name=C9F09_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08605 PYKB01000589.1 Protein Homology CDS 11127 11744 . - 0 ID=cds-TGC95556.1;Parent=gene-C9F09_08605;Dbxref=NCBI_GP:TGC95556.1;Name=TGC95556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456695.1;locus_tag=C9F09_08605;product=hypothetical protein;protein_id=TGC95556.1;transl_table=11 PYKB01000589.1 Genbank pseudogene 11908 12093 . + . ID=gene-C9F09_08610;Name=C9F09_08610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08610;pseudo=true PYKB01000589.1 Protein Homology CDS 11908 12093 . + 0 ID=cds-C9F09_08610;Parent=gene-C9F09_08610;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456696.1;locus_tag=C9F09_08610;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001118.1 1 4234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001118.1 Genbank region 1 4234 . + . ID=PYKB01001118.1:1..4234;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001118.1 Genbank gene 395 580 . - . ID=gene-C9F09_18780;Name=C9F09_18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18780 PYKB01001118.1 Protein Homology CDS 395 580 . - 0 ID=cds-TGC85569.1;Parent=gene-C9F09_18780;Dbxref=NCBI_GP:TGC85569.1;Name=TGC85569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328146.1;locus_tag=C9F09_18780;product=hypothetical protein;protein_id=TGC85569.1;transl_table=11 PYKB01001118.1 Genbank gene 678 1049 . + . ID=gene-C9F09_18785;Name=C9F09_18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18785 PYKB01001118.1 Protein Homology CDS 678 1049 . + 0 ID=cds-TGC85570.1;Parent=gene-C9F09_18785;Dbxref=NCBI_GP:TGC85570.1;Name=TGC85570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668372.1;locus_tag=C9F09_18785;product=hypothetical protein;protein_id=TGC85570.1;transl_table=11 PYKB01001118.1 Genbank gene 1107 1934 . + . ID=gene-C9F09_18790;Name=C9F09_18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18790 PYKB01001118.1 Protein Homology CDS 1107 1934 . + 0 ID=cds-TGC85571.1;Parent=gene-C9F09_18790;Dbxref=NCBI_GP:TGC85571.1;Name=TGC85571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016247398.1;locus_tag=C9F09_18790;product=hypothetical protein;protein_id=TGC85571.1;transl_table=11 PYKB01001118.1 Genbank gene 2071 2610 . + . ID=gene-C9F09_18795;Name=C9F09_18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18795 PYKB01001118.1 Protein Homology CDS 2071 2610 . + 0 ID=cds-TGC85572.1;Parent=gene-C9F09_18795;Dbxref=NCBI_GP:TGC85572.1;Name=TGC85572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008351.1;locus_tag=C9F09_18795;product=hypothetical protein;protein_id=TGC85572.1;transl_table=11 PYKB01001118.1 Genbank gene 2754 2990 . + . ID=gene-C9F09_18800;Name=C9F09_18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18800 PYKB01001118.1 Protein Homology CDS 2754 2990 . + 0 ID=cds-TGC85573.1;Parent=gene-C9F09_18800;Dbxref=NCBI_GP:TGC85573.1;Name=TGC85573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309637.1;locus_tag=C9F09_18800;product=excisionase;protein_id=TGC85573.1;transl_table=11 PYKB01001118.1 Genbank gene 2980 4122 . + . ID=gene-C9F09_18805;Name=C9F09_18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18805 PYKB01001118.1 Protein Homology CDS 2980 4122 . + 0 ID=cds-TGC85574.1;Parent=gene-C9F09_18805;Dbxref=NCBI_GP:TGC85574.1;Name=TGC85574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750633.1;locus_tag=C9F09_18805;product=integrase;protein_id=TGC85574.1;transl_table=11 ##sequence-region PYKB01000404.1 1 4229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000404.1 Genbank region 1 4229 . + . ID=PYKB01000404.1:1..4229;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000404.1 Genbank gene 1 223 . + . ID=gene-C9F09_04545;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=C9F09_04545;partial=true;start_range=.,1 PYKB01000404.1 Protein Homology CDS 1 223 . + 1 ID=cds-TGC99511.1;Parent=gene-C9F09_04545;Dbxref=NCBI_GP:TGC99511.1;Name=TGC99511.1;Note=involved in type III protein export during flagellum assembly;gbkey=CDS;gene=fliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=C9F09_04545;partial=true;product=flagellum-specific ATP synthase FliI;protein_id=TGC99511.1;start_range=.,1;transl_table=11 PYKB01000404.1 Genbank gene 245 688 . + . ID=gene-C9F09_04550;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=C9F09_04550 PYKB01000404.1 Protein Homology CDS 245 688 . + 0 ID=cds-TGC99512.1;Parent=gene-C9F09_04550;Dbxref=NCBI_GP:TGC99512.1;Name=TGC99512.1;Note=rod/hook and filament chaperone;gbkey=CDS;gene=fliJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456534.1;locus_tag=C9F09_04550;product=flagellar protein FliJ;protein_id=TGC99512.1;transl_table=11 PYKB01000404.1 Genbank gene 685 1908 . + . ID=gene-C9F09_04555;Name=C9F09_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04555 PYKB01000404.1 Protein Homology CDS 685 1908 . + 0 ID=cds-TGC99513.1;Parent=gene-C9F09_04555;Dbxref=NCBI_GP:TGC99513.1;Name=TGC99513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=C9F09_04555;product=flagellar hook length control protein FliK;protein_id=TGC99513.1;transl_table=11 PYKB01000404.1 Genbank gene 2013 2480 . + . ID=gene-C9F09_04560;Name=C9F09_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04560 PYKB01000404.1 Protein Homology CDS 2013 2480 . + 0 ID=cds-TGC99514.1;Parent=gene-C9F09_04560;Dbxref=NCBI_GP:TGC99514.1;Name=TGC99514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=C9F09_04560;product=flagellar basal body-associated protein FliL;protein_id=TGC99514.1;transl_table=11 PYKB01000404.1 Genbank gene 2485 3489 . + . ID=gene-C9F09_04565;Name=C9F09_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04565 PYKB01000404.1 Protein Homology CDS 2485 3489 . + 0 ID=cds-TGC99515.1;Parent=gene-C9F09_04565;Dbxref=NCBI_GP:TGC99515.1;Name=TGC99515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=C9F09_04565;product=flagellar motor switch protein FliM;protein_id=TGC99515.1;transl_table=11 PYKB01000404.1 Genbank gene 3486 3899 . + . ID=gene-C9F09_04570;Name=C9F09_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04570 PYKB01000404.1 Protein Homology CDS 3486 3899 . + 0 ID=cds-TGC99516.1;Parent=gene-C9F09_04570;Dbxref=NCBI_GP:TGC99516.1;Name=TGC99516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906238.1;locus_tag=C9F09_04570;product=flagellar motor switch protein FliN;protein_id=TGC99516.1;transl_table=11 PYKB01000404.1 Genbank gene 3899 4229 . + . ID=gene-C9F09_04575;Name=C9F09_04575;end_range=4229,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04575;partial=true PYKB01000404.1 Protein Homology CDS 3899 4229 . + 0 ID=cds-TGC99517.1;Parent=gene-C9F09_04575;Dbxref=NCBI_GP:TGC99517.1;Name=TGC99517.1;Note=with FlhA%2C FlhB%2C FliP%2C FliQ and FliR is one of the membrane components of the flagellar export apparatus;end_range=4229,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456539.1;locus_tag=C9F09_04575;partial=true;product=flagellar biosynthesis protein FliO;protein_id=TGC99517.1;transl_table=11 ##sequence-region PYKB01000278.1 1 4222 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000278.1 Genbank region 1 4222 . + . ID=PYKB01000278.1:1..4222;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000278.1 Genbank gene 1 784 . - . ID=gene-C9F09_03150;Name=C9F09_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03150;partial=true;start_range=.,1 PYKB01000278.1 Protein Homology CDS 1 784 . - 0 ID=cds-TGD01795.1;Parent=gene-C9F09_03150;Dbxref=NCBI_GP:TGD01795.1;Name=TGD01795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=C9F09_03150;partial=true;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=TGD01795.1;start_range=.,1;transl_table=11 PYKB01000278.1 Genbank gene 989 1255 . + . ID=gene-C9F09_03155;Name=C9F09_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03155 PYKB01000278.1 Protein Homology CDS 989 1255 . + 0 ID=cds-TGD01796.1;Parent=gene-C9F09_03155;Dbxref=NCBI_GP:TGD01796.1;Name=TGD01796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=C9F09_03155;product=DksA/TraR family C4-type zinc finger protein;protein_id=TGD01796.1;transl_table=11 PYKB01000278.1 Genbank gene 1540 1800 . + . ID=gene-C9F09_03160;Name=C9F09_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03160 PYKB01000278.1 Protein Homology CDS 1540 1800 . + 0 ID=cds-TGD01797.1;Parent=gene-C9F09_03160;Dbxref=NCBI_GP:TGD01797.1;Name=TGD01797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455359.1;locus_tag=C9F09_03160;product=DUF1471 domain-containing protein;protein_id=TGD01797.1;transl_table=11 PYKB01000278.1 Genbank gene 1956 2930 . - . ID=gene-C9F09_03165;Name=C9F09_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03165 PYKB01000278.1 Protein Homology CDS 1956 2930 . - 0 ID=cds-TGD01798.1;Parent=gene-C9F09_03165;Dbxref=NCBI_GP:TGD01798.1;Name=TGD01798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=C9F09_03165;product=DNA-binding protein YbiB;protein_id=TGD01798.1;transl_table=11 PYKB01000278.1 Genbank gene 2960 4222 . - . ID=gene-C9F09_03170;Name=dinG;end_range=4222,.;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=C9F09_03170;partial=true PYKB01000278.1 Protein Homology CDS 2960 4222 . - 0 ID=cds-TGD01799.1;Parent=gene-C9F09_03170;Dbxref=NCBI_GP:TGD01799.1;Name=TGD01799.1;Note=helicase involved in DNA repair and perhaps also replication;end_range=4222,.;gbkey=CDS;gene=dinG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=C9F09_03170;partial=true;product=ATP-dependent DNA helicase DinG;protein_id=TGD01799.1;transl_table=11 ##sequence-region PYKB01001366.1 1 4221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001366.1 Genbank region 1 4221 . + . ID=PYKB01001366.1:1..4221;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001366.1 Genbank pseudogene 62 385 . - . ID=gene-C9F09_23455;Name=C9F09_23455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23455;pseudo=true PYKB01001366.1 Protein Homology CDS 62 385 . - 0 ID=cds-C9F09_23455;Parent=gene-C9F09_23455;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920493.1;locus_tag=C9F09_23455;product=peptidylprolyl isomerase A;pseudo=true;transl_table=11 PYKB01001366.1 Genbank gene 662 1843 . + . ID=gene-C9F09_23460;Name=C9F09_23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23460 PYKB01001366.1 Protein Homology CDS 662 1843 . + 0 ID=cds-TGC80239.1;Parent=gene-C9F09_23460;Dbxref=NCBI_GP:TGC80239.1;Name=TGC80239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=C9F09_23460;product=MFS transporter;protein_id=TGC80239.1;transl_table=11 PYKB01001366.1 Genbank pseudogene 2160 4172 . + . ID=gene-C9F09_23465;Name=C9F09_23465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23465;pseudo=true PYKB01001366.1 Protein Homology CDS 2160 4172 . + 0 ID=cds-C9F09_23465;Parent=gene-C9F09_23465;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=C9F09_23465;product=nitrite reductase (NAD(P)H);pseudo=true;transl_table=11 ##sequence-region PYKB01000735.1 1 4209 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000735.1 Genbank region 1 4209 . + . ID=PYKB01000735.1:1..4209;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000735.1 Genbank gene 1 1495 . - . ID=gene-C9F09_11285;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=C9F09_11285;partial=true;start_range=.,1 PYKB01000735.1 Protein Homology CDS 1 1495 . - 0 ID=cds-TGC93207.1;Parent=gene-C9F09_11285;Dbxref=NCBI_GP:TGC93207.1;Name=TGC93207.1;Note=bifunctional 2%2C3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase%3B activates the carboxylate group of 2%2C3-dihydroxy-benzoate forming (2%2C3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2%2C3-dihydroxy-benzoate adenylate;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=C9F09_11285;partial=true;product=2%2C3-dihydroxybenzoate-AMP ligase;protein_id=TGC93207.1;start_range=.,1;transl_table=11 PYKB01000735.1 Genbank gene 1505 2680 . - . ID=gene-C9F09_11290;Name=C9F09_11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11290 PYKB01000735.1 Protein Homology CDS 1505 2680 . - 0 ID=cds-TGC93208.1;Parent=gene-C9F09_11290;Dbxref=NCBI_GP:TGC93208.1;Name=TGC93208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=C9F09_11290;product=isochorismate synthase EntC;protein_id=TGC93208.1;transl_table=11 PYKB01000735.1 Genbank gene 2988 3944 . + . ID=gene-C9F09_11295;Name=C9F09_11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11295 PYKB01000735.1 Protein Homology CDS 2988 3944 . + 0 ID=cds-TGC93209.1;Parent=gene-C9F09_11295;Dbxref=NCBI_GP:TGC93209.1;Name=TGC93209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=C9F09_11295;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=TGC93209.1;transl_table=11 PYKB01000735.1 Genbank gene 4007 4209 . - . ID=gene-C9F09_11300;Name=C9F09_11300;end_range=4209,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11300;partial=true PYKB01000735.1 Protein Homology CDS 4007 4209 . - 2 ID=cds-TGC93210.1;Parent=gene-C9F09_11300;Dbxref=NCBI_GP:TGC93210.1;Name=TGC93210.1;end_range=4209,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455169.1;locus_tag=C9F09_11300;partial=true;product=hypothetical protein;protein_id=TGC93210.1;transl_table=11 ##sequence-region PYKB01000131.1 1 4205 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000131.1 Genbank region 1 4205 . + . ID=PYKB01000131.1:1..4205;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000131.1 Genbank gene 1 299 . - . ID=gene-C9F09_01485;Name=C9F09_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01485;partial=true;start_range=.,1 PYKB01000131.1 Protein Homology CDS 1 299 . - 0 ID=cds-TGD04839.1;Parent=gene-C9F09_01485;Dbxref=NCBI_GP:TGD04839.1;Name=TGD04839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=C9F09_01485;partial=true;product=sulfolactaldehyde 3-reductase;protein_id=TGD04839.1;start_range=.,1;transl_table=11 PYKB01000131.1 Genbank gene 464 1360 . + . ID=gene-C9F09_01490;Name=C9F09_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01490 PYKB01000131.1 Protein Homology CDS 464 1360 . + 0 ID=cds-TGD04835.1;Parent=gene-C9F09_01490;Dbxref=NCBI_GP:TGD04835.1;Name=TGD04835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458027.1;locus_tag=C9F09_01490;product=sugar kinase;protein_id=TGD04835.1;transl_table=11 PYKB01000131.1 Genbank pseudogene 1394 2197 . + . ID=gene-C9F09_01495;Name=C9F09_01495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01495;pseudo=true PYKB01000131.1 Protein Homology CDS 1394 2197 . + 0 ID=cds-C9F09_01495;Parent=gene-C9F09_01495;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=C9F09_01495;product=DeoR family transcriptional regulator;pseudo=true;transl_table=11 PYKB01000131.1 Genbank gene 2388 2987 . + . ID=gene-C9F09_01500;Name=C9F09_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01500 PYKB01000131.1 Protein Homology CDS 2388 2987 . + 0 ID=cds-TGD04836.1;Parent=gene-C9F09_01500;Dbxref=NCBI_GP:TGD04836.1;Name=TGD04836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458025.1;locus_tag=C9F09_01500;product=glucose-1-phosphatase;protein_id=TGD04836.1;transl_table=11 PYKB01000131.1 Genbank gene 2981 3853 . + . ID=gene-C9F09_01505;Name=C9F09_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01505 PYKB01000131.1 Protein Homology CDS 2981 3853 . + 0 ID=cds-TGD04837.1;Parent=gene-C9F09_01505;Dbxref=NCBI_GP:TGD04837.1;Name=TGD04837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458024.1;locus_tag=C9F09_01505;product=virulence factor BrkB family protein;protein_id=TGD04837.1;transl_table=11 PYKB01000131.1 Genbank gene 3850 4205 . + . ID=gene-C9F09_01510;Name=dtd;end_range=4205,.;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=C9F09_01510;partial=true PYKB01000131.1 Protein Homology CDS 3850 4205 . + 0 ID=cds-TGD04838.1;Parent=gene-C9F09_01510;Dbxref=NCBI_GP:TGD04838.1;Name=TGD04838.1;end_range=4205,.;gbkey=CDS;gene=dtd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=C9F09_01510;partial=true;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=TGD04838.1;transl_table=11 ##sequence-region PYKB01000615.1 1 4201 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000615.1 Genbank region 1 4201 . + . ID=PYKB01000615.1:1..4201;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000615.1 Genbank gene 1 339 . - . ID=gene-C9F09_09115;Name=C9F09_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09115;partial=true;start_range=.,1 PYKB01000615.1 Protein Homology CDS 1 339 . - 0 ID=cds-TGC95019.1;Parent=gene-C9F09_09115;Dbxref=NCBI_GP:TGC95019.1;Name=TGC95019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=C9F09_09115;partial=true;product=hypothetical protein;protein_id=TGC95019.1;start_range=.,1;transl_table=11 PYKB01000615.1 Genbank gene 529 1392 . - . ID=gene-C9F09_09120;Name=C9F09_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09120 PYKB01000615.1 Protein Homology CDS 529 1392 . - 0 ID=cds-TGC95020.1;Parent=gene-C9F09_09120;Dbxref=NCBI_GP:TGC95020.1;Name=TGC95020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456759.1;locus_tag=C9F09_09120;product=LysR family transcriptional regulator;protein_id=TGC95020.1;transl_table=11 PYKB01000615.1 Genbank gene 1513 2562 . + . ID=gene-C9F09_09125;Name=C9F09_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09125 PYKB01000615.1 Protein Homology CDS 1513 2562 . + 0 ID=cds-TGC95021.1;Parent=gene-C9F09_09125;Dbxref=NCBI_GP:TGC95021.1;Name=TGC95021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456760.1;locus_tag=C9F09_09125;product=YeiH family putative sulfate export transporter;protein_id=TGC95021.1;transl_table=11 PYKB01000615.1 Genbank gene 2641 3498 . + . ID=gene-C9F09_09130;Name=C9F09_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09130 PYKB01000615.1 Protein Homology CDS 2641 3498 . + 0 ID=cds-TGC95022.1;Parent=gene-C9F09_09130;Dbxref=NCBI_GP:TGC95022.1;Name=TGC95022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=C9F09_09130;product=endonuclease;protein_id=TGC95022.1;transl_table=11 PYKB01000615.1 Genbank pseudogene 3563 4129 . - . ID=gene-C9F09_09135;Name=C9F09_09135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_09135;pseudo=true PYKB01000615.1 Protein Homology CDS 3563 4129 . - 0 ID=cds-C9F09_09135;Parent=gene-C9F09_09135;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456762.1;locus_tag=C9F09_09135;product=PTS fructose transporter subunit EIIBC;pseudo=true;transl_table=11 ##sequence-region PYKB01000902.1 1 4200 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000902.1 Genbank region 1 4200 . + . ID=PYKB01000902.1:1..4200;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000902.1 Genbank gene 1 315 . - . ID=gene-C9F09_14840;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=C9F09_14840;partial=true;start_range=.,1 PYKB01000902.1 Protein Homology CDS 1 315 . - 0 ID=cds-TGC90107.1;Parent=gene-C9F09_14840;Dbxref=NCBI_GP:TGC90107.1;Name=TGC90107.1;Note=involved in type III protein export during flagellum assembly;gbkey=CDS;gene=fliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456533.1;locus_tag=C9F09_14840;partial=true;product=flagellum-specific ATP synthase FliI;protein_id=TGC90107.1;start_range=.,1;transl_table=11 PYKB01000902.1 Genbank gene 315 1022 . - . ID=gene-C9F09_14845;Name=C9F09_14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14845 PYKB01000902.1 Protein Homology CDS 315 1022 . - 0 ID=cds-TGC90108.1;Parent=gene-C9F09_14845;Dbxref=NCBI_GP:TGC90108.1;Name=TGC90108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456532.1;locus_tag=C9F09_14845;product=flagellar assembly protein FliH;protein_id=TGC90108.1;transl_table=11 PYKB01000902.1 Genbank gene 1015 2010 . - . ID=gene-C9F09_14850;Name=C9F09_14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14850 PYKB01000902.1 Protein Homology CDS 1015 2010 . - 0 ID=cds-TGC90109.1;Parent=gene-C9F09_14850;Dbxref=NCBI_GP:TGC90109.1;Name=TGC90109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456531.1;locus_tag=C9F09_14850;product=flagellar motor switch protein FliG;protein_id=TGC90109.1;transl_table=11 PYKB01000902.1 Genbank gene 2003 3691 . - . ID=gene-C9F09_14855;Name=C9F09_14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14855 PYKB01000902.1 Protein Homology CDS 2003 3691 . - 0 ID=cds-TGC90110.1;Parent=gene-C9F09_14855;Dbxref=NCBI_GP:TGC90110.1;Name=TGC90110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=C9F09_14855;product=flagellar basal body M-ring protein FliF;protein_id=TGC90110.1;transl_table=11 PYKB01000902.1 Genbank gene 3908 4200 . + . ID=gene-C9F09_14860;Name=C9F09_14860;end_range=4200,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14860;partial=true PYKB01000902.1 Protein Homology CDS 3908 4200 . + 0 ID=cds-TGC90111.1;Parent=gene-C9F09_14860;Dbxref=NCBI_GP:TGC90111.1;Name=TGC90111.1;end_range=4200,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=C9F09_14860;partial=true;product=flagellar hook-basal body complex protein FliE;protein_id=TGC90111.1;transl_table=11 ##sequence-region PYKB01001445.1 1 4199 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001445.1 Genbank region 1 4199 . + . ID=PYKB01001445.1:1..4199;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001445.1 Genbank pseudogene 1 652 . + . ID=gene-C9F09_25075;Name=C9F09_25075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_25075;pseudo=true PYKB01001445.1 Protein Homology CDS 1 652 . + 1 ID=cds-C9F09_25075;Parent=gene-C9F09_25075;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457743.1;locus_tag=C9F09_25075;product=HTH-type transcriptional activator AaeR;pseudo=true;transl_table=11 PYKB01001445.1 Genbank gene 774 2219 . - . ID=gene-C9F09_25080;Name=C9F09_25080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25080 PYKB01001445.1 Protein Homology CDS 774 2219 . - 0 ID=cds-TGC78366.1;Parent=gene-C9F09_25080;Dbxref=NCBI_GP:TGC78366.1;Name=TGC78366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457744.1;locus_tag=C9F09_25080;product=metalloprotease TldD;protein_id=TGC78366.1;transl_table=11 PYKB01001445.1 Genbank pseudogene 2364 4199 . - . ID=gene-C9F09_25085;Name=C9F09_25085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_25085;pseudo=true PYKB01001445.1 Protein Homology CDS 2364 4199 . - 0 ID=cds-C9F09_25085;Parent=gene-C9F09_25085;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=C9F09_25085;product=TIGR02099 family protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001568.1 1 4198 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001568.1 Genbank region 1 4198 . + . ID=PYKB01001568.1:1..4198;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001568.1 Genbank gene 41 778 . + . ID=gene-C9F09_27360;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=C9F09_27360 PYKB01001568.1 Protein Homology CDS 41 778 . + 0 ID=cds-TGC75596.1;Parent=gene-C9F09_27360;Dbxref=NCBI_GP:TGC75596.1;Name=TGC75596.1;gbkey=CDS;gene=fliP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456540.1;locus_tag=C9F09_27360;product=flagellar biosynthetic protein FliP;protein_id=TGC75596.1;transl_table=11 PYKB01001568.1 Genbank gene 788 1057 . + . ID=gene-C9F09_27365;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=C9F09_27365 PYKB01001568.1 Protein Homology CDS 788 1057 . + 0 ID=cds-TGC75590.1;Parent=gene-C9F09_27365;Dbxref=NCBI_GP:TGC75590.1;Name=TGC75590.1;gbkey=CDS;gene=fliQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=C9F09_27365;product=flagellar biosynthetic protein FliQ;protein_id=TGC75590.1;transl_table=11 PYKB01001568.1 Genbank gene 1066 1860 . + . ID=gene-C9F09_27370;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=C9F09_27370 PYKB01001568.1 Protein Homology CDS 1066 1860 . + 0 ID=cds-TGC75591.1;Parent=gene-C9F09_27370;Dbxref=NCBI_GP:TGC75591.1;Name=TGC75591.1;Note=FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=C9F09_27370;product=flagellar biosynthetic protein FliR;protein_id=TGC75591.1;transl_table=11 PYKB01001568.1 Genbank gene 2142 2765 . + . ID=gene-C9F09_27375;Name=C9F09_27375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27375 PYKB01001568.1 Protein Homology CDS 2142 2765 . + 0 ID=cds-TGC75592.1;Parent=gene-C9F09_27375;Dbxref=NCBI_GP:TGC75592.1;Name=TGC75592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=C9F09_27375;product=helix-turn-helix transcriptional regulator;protein_id=TGC75592.1;transl_table=11 PYKB01001568.1 Genbank gene 2804 3052 . - . ID=gene-C9F09_27380;Name=C9F09_27380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27380 PYKB01001568.1 Protein Homology CDS 2804 3052 . - 0 ID=cds-TGC75593.1;Parent=gene-C9F09_27380;Dbxref=NCBI_GP:TGC75593.1;Name=TGC75593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005105543.1;locus_tag=C9F09_27380;product=DsrB protein;protein_id=TGC75593.1;transl_table=11 PYKB01001568.1 Genbank gene 3127 3354 . + . ID=gene-C9F09_27385;Name=C9F09_27385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27385 PYKB01001568.1 Protein Homology CDS 3127 3354 . + 0 ID=cds-TGC75594.1;Parent=gene-C9F09_27385;Dbxref=NCBI_GP:TGC75594.1;Name=TGC75594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456545.1;locus_tag=C9F09_27385;product=DUF2525 domain-containing protein;protein_id=TGC75594.1;transl_table=11 PYKB01001568.1 Genbank gene 3664 4198 . + . ID=gene-C9F09_27390;Name=C9F09_27390;end_range=4198,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27390;partial=true PYKB01001568.1 Protein Homology CDS 3664 4198 . + 0 ID=cds-TGC75595.1;Parent=gene-C9F09_27390;Dbxref=NCBI_GP:TGC75595.1;Name=TGC75595.1;end_range=4198,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456546.1;locus_tag=C9F09_27390;partial=true;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=TGC75595.1;transl_table=11 ##sequence-region PYKB01001133.1 1 12094 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001133.1 Genbank region 1 12094 . + . ID=PYKB01001133.1:1..12094;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001133.1 Genbank gene 1 182 . - . ID=gene-C9F09_19095;Name=C9F09_19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19095;partial=true;start_range=.,1 PYKB01001133.1 Protein Homology CDS 1 182 . - 0 ID=cds-TGC85121.1;Parent=gene-C9F09_19095;Dbxref=NCBI_GP:TGC85121.1;Name=TGC85121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458801.1;locus_tag=C9F09_19095;partial=true;product=DUF2065 domain-containing protein;protein_id=TGC85121.1;start_range=.,1;transl_table=11 PYKB01001133.1 Genbank gene 261 1265 . - . ID=gene-C9F09_19100;Name=C9F09_19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19100 PYKB01001133.1 Protein Homology CDS 261 1265 . - 0 ID=cds-TGC85122.1;Parent=gene-C9F09_19100;Dbxref=NCBI_GP:TGC85122.1;Name=TGC85122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458800.1;locus_tag=C9F09_19100;product=protease modulator HflC;protein_id=TGC85122.1;transl_table=11 PYKB01001133.1 Genbank gene 1268 2527 . - . ID=gene-C9F09_19105;Name=C9F09_19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19105 PYKB01001133.1 Protein Homology CDS 1268 2527 . - 0 ID=cds-TGC85123.1;Parent=gene-C9F09_19105;Dbxref=NCBI_GP:TGC85123.1;Name=TGC85123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=C9F09_19105;product=FtsH protease activity modulator HflK;protein_id=TGC85123.1;transl_table=11 PYKB01001133.1 Genbank gene 2742 4022 . - . ID=gene-C9F09_19110;Name=C9F09_19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19110 PYKB01001133.1 Protein Homology CDS 2742 4022 . - 0 ID=cds-TGC85124.1;Parent=gene-C9F09_19110;Dbxref=NCBI_GP:TGC85124.1;Name=TGC85124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=C9F09_19110;product=GTPase HflX;protein_id=TGC85124.1;transl_table=11 PYKB01001133.1 Genbank gene 4094 4402 . - . ID=gene-C9F09_19115;Name=C9F09_19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19115 PYKB01001133.1 Protein Homology CDS 4094 4402 . - 0 ID=cds-TGC85125.1;Parent=gene-C9F09_19115;Dbxref=NCBI_GP:TGC85125.1;Name=TGC85125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458797.1;locus_tag=C9F09_19115;product=RNA-binding protein Hfq;protein_id=TGC85125.1;transl_table=11 PYKB01001133.1 Genbank gene 4485 5435 . - . ID=gene-C9F09_19120;Name=C9F09_19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19120 PYKB01001133.1 Protein Homology CDS 4485 5435 . - 0 ID=cds-TGC85126.1;Parent=gene-C9F09_19120;Dbxref=NCBI_GP:TGC85126.1;Name=TGC85126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=C9F09_19120;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=TGC85126.1;transl_table=11 PYKB01001133.1 Genbank gene 5428 7284 . - . ID=gene-C9F09_19125;Name=C9F09_19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19125 PYKB01001133.1 Protein Homology CDS 5428 7284 . - 0 ID=cds-TGC85127.1;Parent=gene-C9F09_19125;Dbxref=NCBI_GP:TGC85127.1;Name=TGC85127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458795.1;locus_tag=C9F09_19125;product=DNA mismatch repair endonuclease MutL;protein_id=TGC85127.1;transl_table=11 PYKB01001133.1 Genbank gene 7294 8613 . - . ID=gene-C9F09_19130;Name=C9F09_19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19130 PYKB01001133.1 Protein Homology CDS 7294 8613 . - 0 ID=cds-TGC85128.1;Parent=gene-C9F09_19130;Dbxref=NCBI_GP:TGC85128.1;Name=TGC85128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=C9F09_19130;product=N-acetylmuramoyl-L-alanine amidase;protein_id=TGC85128.1;transl_table=11 PYKB01001133.1 Genbank gene 8630 9091 . - . ID=gene-C9F09_19135;Name=C9F09_19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19135 PYKB01001133.1 Protein Homology CDS 8630 9091 . - 0 ID=cds-TGC85129.1;Parent=gene-C9F09_19135;Dbxref=NCBI_GP:TGC85129.1;Name=TGC85129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458793.1;locus_tag=C9F09_19135;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=TGC85129.1;transl_table=11 PYKB01001133.1 Genbank gene 9063 10610 . - . ID=gene-C9F09_19140;Name=C9F09_19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19140 PYKB01001133.1 Protein Homology CDS 9063 10610 . - 0 ID=cds-TGC85130.1;Parent=gene-C9F09_19140;Dbxref=NCBI_GP:TGC85130.1;Name=TGC85130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=C9F09_19140;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=TGC85130.1;transl_table=11 PYKB01001133.1 Genbank gene 10594 11748 . + . ID=gene-C9F09_19145;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=C9F09_19145 PYKB01001133.1 Protein Homology CDS 10594 11748 . + 0 ID=cds-TGC85131.1;Parent=gene-C9F09_19145;Dbxref=NCBI_GP:TGC85131.1;Name=TGC85131.1;gbkey=CDS;gene=queG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463216.3;locus_tag=C9F09_19145;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=TGC85131.1;transl_table=11 PYKB01001133.1 Genbank gene 12018 12093 . - . ID=gene-C9F09_19150;Name=C9F09_19150;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_19150 PYKB01001133.1 tRNAscan-SE tRNA 12018 12093 . - . ID=rna-C9F09_19150;Parent=gene-C9F09_19150;anticodon=(pos:complement(12058..12060));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_19150;product=tRNA-Gly PYKB01001133.1 tRNAscan-SE exon 12018 12093 . - . ID=exon-C9F09_19150-1;Parent=rna-C9F09_19150;anticodon=(pos:complement(12058..12060));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_19150;product=tRNA-Gly ##sequence-region PYKB01001423.1 1 4180 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001423.1 Genbank region 1 4180 . + . ID=PYKB01001423.1:1..4180;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001423.1 Genbank gene 1 1167 . + . ID=gene-C9F09_24490;Name=C9F09_24490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24490;partial=true;start_range=.,1 PYKB01001423.1 Protein Homology CDS 1 1167 . + 0 ID=cds-TGC78913.1;Parent=gene-C9F09_24490;Dbxref=NCBI_GP:TGC78913.1;Name=TGC78913.1;Note=Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=C9F09_24490;partial=true;product=bifunctional UDP-glucuronic acid oxidase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase;protein_id=TGC78913.1;start_range=.,1;transl_table=11 PYKB01001423.1 Genbank gene 1164 2063 . + . ID=gene-C9F09_24495;Name=C9F09_24495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24495 PYKB01001423.1 Protein Homology CDS 1164 2063 . + 0 ID=cds-TGC78914.1;Parent=gene-C9F09_24495;Dbxref=NCBI_GP:TGC78914.1;Name=TGC78914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456843.1;locus_tag=C9F09_24495;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD;protein_id=TGC78914.1;transl_table=11 PYKB01001423.1 Genbank gene 2060 3706 . + . ID=gene-C9F09_24500;Name=C9F09_24500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24500 PYKB01001423.1 Protein Homology CDS 2060 3706 . + 0 ID=cds-TGC78915.1;Parent=gene-C9F09_24500;Dbxref=NCBI_GP:TGC78915.1;Name=TGC78915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456844.1;locus_tag=C9F09_24500;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=TGC78915.1;transl_table=11 PYKB01001423.1 Genbank gene 3703 4038 . + . ID=gene-C9F09_24505;Name=C9F09_24505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24505 PYKB01001423.1 Protein Homology CDS 3703 4038 . + 0 ID=cds-TGC78916.1;Parent=gene-C9F09_24505;Dbxref=NCBI_GP:TGC78916.1;Name=TGC78916.1;Note=with ArnE is involved in transporting 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from the cytoplasmic face to the periplasmic face of the inner membrane;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=C9F09_24505;product=4-amino-4-deoxy-L-arabinose-phospho-UDP flippase;protein_id=TGC78916.1;transl_table=11 PYKB01001423.1 Genbank pseudogene 4038 4180 . + . ID=gene-C9F09_24510;Name=C9F09_24510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_24510;pseudo=true PYKB01001423.1 Protein Homology CDS 4038 4180 . + 0 ID=cds-C9F09_24510;Parent=gene-C9F09_24510;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456846.1;locus_tag=C9F09_24510;product=4-amino-4-deoxy-L-arabinose-phospho-UDP flippase;pseudo=true;transl_table=11 ##sequence-region PYKB01000824.1 1 4170 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000824.1 Genbank region 1 4170 . + . ID=PYKB01000824.1:1..4170;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000824.1 Genbank gene 1 668 . + . ID=gene-C9F09_12975;Name=C9F09_12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12975;partial=true;start_range=.,1 PYKB01000824.1 Protein Homology CDS 1 668 . + 2 ID=cds-TGC91735.1;Parent=gene-C9F09_12975;Dbxref=NCBI_GP:TGC91735.1;Name=TGC91735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=C9F09_12975;partial=true;product=aromatic amino acid transporter AroP;protein_id=TGC91735.1;start_range=.,1;transl_table=11 PYKB01000824.1 Genbank gene 710 1957 . - . ID=gene-C9F09_12980;Name=C9F09_12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12980 PYKB01000824.1 Protein Homology CDS 710 1957 . - 0 ID=cds-TGC91736.1;Parent=gene-C9F09_12980;Dbxref=NCBI_GP:TGC91736.1;Name=TGC91736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=C9F09_12980;product=miniconductance mechanosensitive channel;protein_id=TGC91736.1;transl_table=11 PYKB01000824.1 Genbank gene 1987 2169 . + . ID=gene-C9F09_12985;Name=C9F09_12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12985 PYKB01000824.1 Protein Homology CDS 1987 2169 . + 0 ID=cds-TGC91737.1;Parent=gene-C9F09_12985;Dbxref=NCBI_GP:TGC91737.1;Name=TGC91737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835293.1;locus_tag=C9F09_12985;product=hypothetical protein;protein_id=TGC91737.1;transl_table=11 PYKB01000824.1 Genbank pseudogene 2268 4130 . + . ID=gene-C9F09_12990;Name=C9F09_12990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12990;pseudo=true PYKB01000824.1 Protein Homology CDS 2268 4130 . + 0 ID=cds-C9F09_12990;Parent=gene-C9F09_12990;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163147.1;locus_tag=C9F09_12990;product=autotransporter domain-containing esterase;pseudo=true;transl_table=11 ##sequence-region PYKB01000999.1 1 4167 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000999.1 Genbank region 1 4167 . + . ID=PYKB01000999.1:1..4167;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000999.1 Genbank pseudogene 63 1199 . + . ID=gene-C9F09_16675;Name=C9F09_16675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16675;pseudo=true PYKB01000999.1 Protein Homology CDS 63 1199 . + 0 ID=cds-C9F09_16675;Parent=gene-C9F09_16675;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=C9F09_16675;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;pseudo=true;transl_table=11 PYKB01000999.1 Genbank gene 1290 1366 . + . ID=gene-C9F09_16680;Name=C9F09_16680;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_16680 PYKB01000999.1 tRNAscan-SE tRNA 1290 1366 . + . ID=rna-C9F09_16680;Parent=gene-C9F09_16680;anticodon=(pos:1324..1326);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_16680;product=tRNA-Pro PYKB01000999.1 tRNAscan-SE exon 1290 1366 . + . ID=exon-C9F09_16680-1;Parent=rna-C9F09_16680;anticodon=(pos:1324..1326);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_16680;product=tRNA-Pro PYKB01000999.1 Genbank gene 1401 1519 . + . ID=gene-C9F09_16685;Name=C9F09_16685;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F09_16685 PYKB01000999.1 cmsearch ncRNA 1401 1519 . + . ID=rna-C9F09_16685;Parent=gene-C9F09_16685;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_16685;product=RtT sRNA PYKB01000999.1 cmsearch exon 1401 1519 . + . ID=exon-C9F09_16685-1;Parent=rna-C9F09_16685;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_16685;product=RtT sRNA PYKB01000999.1 Genbank pseudogene 1510 2517 . - . ID=gene-C9F09_16690;Name=C9F09_16690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16690;pseudo=true PYKB01000999.1 Protein Homology CDS 1510 2517 . - 0 ID=cds-C9F09_16690;Parent=gene-C9F09_16690;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458287.1;locus_tag=C9F09_16690;product=LacI family transcriptional regulator;pseudo=true;transl_table=11 PYKB01000999.1 Genbank gene 2667 3791 . + . ID=gene-C9F09_16695;Name=C9F09_16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16695 PYKB01000999.1 Protein Homology CDS 2667 3791 . + 0 ID=cds-TGC88224.1;Parent=gene-C9F09_16695;Dbxref=NCBI_GP:TGC88224.1;Name=TGC88224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458288.1;locus_tag=C9F09_16695;product=aryl sulfotransferase;protein_id=TGC88224.1;transl_table=11 PYKB01000999.1 Genbank pseudogene 3849 4073 . + . ID=gene-C9F09_16700;Name=C9F09_16700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16700;pseudo=true PYKB01000999.1 Protein Homology CDS 3849 4073 . + 0 ID=cds-C9F09_16700;Parent=gene-C9F09_16700;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=C9F09_16700;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000359.1 1 4157 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000359.1 Genbank region 1 4157 . + . ID=PYKB01000359.1:1..4157;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000359.1 Genbank gene 1 454 . - . ID=gene-C9F09_04045;Name=C9F09_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04045;partial=true;start_range=.,1 PYKB01000359.1 Protein Homology CDS 1 454 . - 0 ID=cds-TGD00284.1;Parent=gene-C9F09_04045;Dbxref=NCBI_GP:TGD00284.1;Name=TGD00284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=C9F09_04045;partial=true;product=cysteine synthase;protein_id=TGD00284.1;start_range=.,1;transl_table=11 PYKB01000359.1 Genbank gene 567 1025 . + . ID=gene-C9F09_04050;Name=C9F09_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04050 PYKB01000359.1 Protein Homology CDS 567 1025 . + 0 ID=cds-TGD00281.1;Parent=gene-C9F09_04050;Dbxref=NCBI_GP:TGD00281.1;Name=TGD00281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455057.1;locus_tag=C9F09_04050;product=Lrp/AsnC family transcriptional regulator;protein_id=TGD00281.1;transl_table=11 PYKB01000359.1 Genbank gene 1066 2838 . + . ID=gene-C9F09_04055;Name=C9F09_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04055 PYKB01000359.1 Protein Homology CDS 1066 2838 . + 0 ID=cds-TGD00282.1;Parent=gene-C9F09_04055;Dbxref=NCBI_GP:TGD00282.1;Name=TGD00282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455058.1;locus_tag=C9F09_04055;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=TGD00282.1;transl_table=11 PYKB01000359.1 Genbank gene 2831 4157 . + . ID=gene-C9F09_04060;Name=C9F09_04060;end_range=4157,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04060;partial=true PYKB01000359.1 Protein Homology CDS 2831 4157 . + 0 ID=cds-TGD00283.1;Parent=gene-C9F09_04060;Dbxref=NCBI_GP:TGD00283.1;Name=TGD00283.1;end_range=4157,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=C9F09_04060;partial=true;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=TGD00283.1;transl_table=11 ##sequence-region PYKB01000566.1 1 4155 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000566.1 Genbank region 1 4155 . + . ID=PYKB01000566.1:1..4155;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000566.1 Genbank gene 1 842 . - . ID=gene-C9F09_07975;Name=C9F09_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07975;partial=true;start_range=.,1 PYKB01000566.1 Protein Homology CDS 1 842 . - 0 ID=cds-TGC96104.1;Parent=gene-C9F09_07975;Dbxref=NCBI_GP:TGC96104.1;Name=TGC96104.1;Note=catalyzes the formation of propanoyl phosphate from propanoate and ATP%3B TdcD also has acetate kinase activities and functions in anaerobic threonine catabolism;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457630.1;locus_tag=C9F09_07975;partial=true;product=propionate/acetate kinase;protein_id=TGC96104.1;start_range=.,1;transl_table=11 PYKB01000566.1 Genbank gene 909 2240 . - . ID=gene-C9F09_07980;Name=C9F09_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07980 PYKB01000566.1 Protein Homology CDS 909 2240 . - 0 ID=cds-TGC96105.1;Parent=gene-C9F09_07980;Dbxref=NCBI_GP:TGC96105.1;Name=TGC96105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=C9F09_07980;product=threonine/serine transporter TdcC;protein_id=TGC96105.1;transl_table=11 PYKB01000566.1 Genbank gene 2261 3250 . - . ID=gene-C9F09_07985;Name=C9F09_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07985 PYKB01000566.1 Protein Homology CDS 2261 3250 . - 0 ID=cds-TGC96106.1;Parent=gene-C9F09_07985;Dbxref=NCBI_GP:TGC96106.1;Name=TGC96106.1;Note=catalyzes the formation of 2-oxobutanoate from L-threonine%3B catabolic;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=C9F09_07985;product=serine/threonine dehydratase;protein_id=TGC96106.1;transl_table=11 PYKB01000566.1 Genbank pseudogene 3348 4112 . - . ID=gene-C9F09_07990;Name=C9F09_07990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07990;pseudo=true PYKB01000566.1 Protein Homology CDS 3348 4112 . - 0 ID=cds-C9F09_07990;Parent=gene-C9F09_07990;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457632.1;locus_tag=C9F09_07990;product=transcriptional regulator TdcA;pseudo=true;transl_table=11 ##sequence-region PYKB01000653.1 1 4155 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000653.1 Genbank region 1 4155 . + . ID=PYKB01000653.1:1..4155;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000653.1 Genbank gene 9 491 . - . ID=gene-C9F09_09790;Name=C9F09_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09790 PYKB01000653.1 Protein Homology CDS 9 491 . - 0 ID=cds-TGC94347.1;Parent=gene-C9F09_09790;Dbxref=NCBI_GP:TGC94347.1;Name=TGC94347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457416.1;locus_tag=C9F09_09790;product=Na(+)-translocating NADH-quinone reductase subunit E;protein_id=TGC94347.1;transl_table=11 PYKB01000653.1 Genbank gene 568 1431 . + . ID=gene-C9F09_09795;Name=C9F09_09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09795 PYKB01000653.1 Protein Homology CDS 568 1431 . + 0 ID=cds-TGC94348.1;Parent=gene-C9F09_09795;Dbxref=NCBI_GP:TGC94348.1;Name=TGC94348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=C9F09_09795;product=LysR family transcriptional regulator;protein_id=TGC94348.1;transl_table=11 PYKB01000653.1 Genbank gene 1554 2732 . + . ID=gene-C9F09_09800;Name=C9F09_09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09800 PYKB01000653.1 Protein Homology CDS 1554 2732 . + 0 ID=cds-TGC94349.1;Parent=gene-C9F09_09800;Dbxref=NCBI_GP:TGC94349.1;Name=TGC94349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457414.1;locus_tag=C9F09_09800;product=acetyl-CoA C-acyltransferase;protein_id=TGC94349.1;transl_table=11 PYKB01000653.1 Genbank gene 2771 2950 . - . ID=gene-C9F09_09805;Name=C9F09_09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09805 PYKB01000653.1 Protein Homology CDS 2771 2950 . - 0 ID=cds-TGC94350.1;Parent=gene-C9F09_09805;Dbxref=NCBI_GP:TGC94350.1;Name=TGC94350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521734.1;locus_tag=C9F09_09805;product=hypothetical protein;protein_id=TGC94350.1;transl_table=11 PYKB01000653.1 Genbank gene 3002 3172 . + . ID=gene-C9F09_09810;Name=C9F09_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09810 PYKB01000653.1 Protein Homology CDS 3002 3172 . + 0 ID=cds-TGC94351.1;Parent=gene-C9F09_09810;Dbxref=NCBI_GP:TGC94351.1;Name=TGC94351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574930.1;locus_tag=C9F09_09810;product=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase;protein_id=TGC94351.1;transl_table=11 PYKB01000653.1 Genbank gene 3163 3999 . + . ID=gene-C9F09_09815;Name=C9F09_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09815 PYKB01000653.1 Protein Homology CDS 3163 3999 . + 0 ID=cds-TGC94352.1;Parent=gene-C9F09_09815;Dbxref=NCBI_GP:TGC94352.1;Name=TGC94352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457413.1;locus_tag=C9F09_09815;product=5-keto-4-deoxyuronate isomerase;protein_id=TGC94352.1;transl_table=11 PYKB01000653.1 Genbank gene 4056 4155 . + . ID=gene-C9F09_09820;Name=C9F09_09820;end_range=4155,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09820;partial=true PYKB01000653.1 Protein Homology CDS 4056 4155 . + 0 ID=cds-TGC94353.1;Parent=gene-C9F09_09820;Dbxref=NCBI_GP:TGC94353.1;Name=TGC94353.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;end_range=4155,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457412.1;locus_tag=C9F09_09820;partial=true;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=TGC94353.1;transl_table=11 ##sequence-region PYKB01001325.1 1 4136 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001325.1 Genbank region 1 4136 . + . ID=PYKB01001325.1:1..4136;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001325.1 Genbank gene 1 911 . - . ID=gene-C9F09_22725;Name=C9F09_22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22725;partial=true;start_range=.,1 PYKB01001325.1 Protein Homology CDS 1 911 . - 0 ID=cds-TGC81049.1;Parent=gene-C9F09_22725;Dbxref=NCBI_GP:TGC81049.1;Name=TGC81049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=C9F09_22725;partial=true;product=anaerobic sulfite reductase subunit A;protein_id=TGC81049.1;start_range=.,1;transl_table=11 PYKB01001325.1 Genbank gene 1093 1971 . - . ID=gene-C9F09_22730;Name=C9F09_22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22730 PYKB01001325.1 Protein Homology CDS 1093 1971 . - 0 ID=cds-TGC81046.1;Parent=gene-C9F09_22730;Dbxref=NCBI_GP:TGC81046.1;Name=TGC81046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=C9F09_22730;product=alpha/beta hydrolase;protein_id=TGC81046.1;transl_table=11 PYKB01001325.1 Genbank gene 2116 2919 . - . ID=gene-C9F09_22735;Name=C9F09_22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22735 PYKB01001325.1 Protein Homology CDS 2116 2919 . - 0 ID=cds-TGC81047.1;Parent=gene-C9F09_22735;Dbxref=NCBI_GP:TGC81047.1;Name=TGC81047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=C9F09_22735;product=inositol-1-monophosphatase;protein_id=TGC81047.1;transl_table=11 PYKB01001325.1 Genbank gene 3038 3769 . + . ID=gene-C9F09_22740;Name=C9F09_22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22740 PYKB01001325.1 Protein Homology CDS 3038 3769 . + 0 ID=cds-TGC81048.1;Parent=gene-C9F09_22740;Dbxref=NCBI_GP:TGC81048.1;Name=TGC81048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457076.1;locus_tag=C9F09_22740;product=tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ;protein_id=TGC81048.1;transl_table=11 PYKB01001325.1 Genbank pseudogene 3929 4132 . + . ID=gene-C9F09_22745;Name=C9F09_22745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22745;pseudo=true PYKB01001325.1 Protein Homology CDS 3929 4132 . + 0 ID=cds-C9F09_22745;Parent=gene-C9F09_22745;Note=regulates the expression of the iscRSUA operon%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=C9F09_22745;product=transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKB01001034.1 1 4126 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001034.1 Genbank region 1 4126 . + . ID=PYKB01001034.1:1..4126;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001034.1 Genbank gene 38 499 . - . ID=gene-C9F09_17255;Name=C9F09_17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17255 PYKB01001034.1 Protein Homology CDS 38 499 . - 0 ID=cds-TGC87512.1;Parent=gene-C9F09_17255;Dbxref=NCBI_GP:TGC87512.1;Name=TGC87512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=C9F09_17255;product=fimbrial protein;protein_id=TGC87512.1;transl_table=11 PYKB01001034.1 Genbank gene 518 1270 . - . ID=gene-C9F09_17260;Name=C9F09_17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17260 PYKB01001034.1 Protein Homology CDS 518 1270 . - 0 ID=cds-TGC87513.1;Parent=gene-C9F09_17260;Dbxref=NCBI_GP:TGC87513.1;Name=TGC87513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=C9F09_17260;product=fimbrial protein;protein_id=TGC87513.1;transl_table=11 PYKB01001034.1 Genbank gene 1288 3945 . - . ID=gene-C9F09_17265;Name=C9F09_17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17265 PYKB01001034.1 Protein Homology CDS 1288 3945 . - 0 ID=cds-TGC87514.1;Parent=gene-C9F09_17265;Dbxref=NCBI_GP:TGC87514.1;Name=TGC87514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=C9F09_17265;product=PapC/FimD family outer membrane usher protein;protein_id=TGC87514.1;transl_table=11 ##sequence-region PYKB01000716.1 1 4121 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000716.1 Genbank region 1 4121 . + . ID=PYKB01000716.1:1..4121;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000716.1 Genbank gene 216 1004 . - . ID=gene-C9F09_10945;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=C9F09_10945 PYKB01000716.1 Protein Homology CDS 216 1004 . - 0 ID=cds-TGC93482.1;Parent=gene-C9F09_10945;Dbxref=NCBI_GP:TGC93482.1;Name=TGC93482.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=C9F09_10945;product=enoyl-[acyl-carrier-protein] reductase FabI;protein_id=TGC93482.1;transl_table=11 PYKB01000716.1 Genbank gene 1122 1421 . - . ID=gene-C9F09_10950;Name=C9F09_10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10950 PYKB01000716.1 Protein Homology CDS 1122 1421 . - 0 ID=cds-TGC93483.1;Parent=gene-C9F09_10950;Dbxref=NCBI_GP:TGC93483.1;Name=TGC93483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=C9F09_10950;product=hypothetical protein;protein_id=TGC93483.1;transl_table=11 PYKB01000716.1 Genbank gene 1396 1575 . - . ID=gene-C9F09_10955;Name=C9F09_10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10955 PYKB01000716.1 Protein Homology CDS 1396 1575 . - 0 ID=cds-TGC93484.1;Parent=gene-C9F09_10955;Dbxref=NCBI_GP:TGC93484.1;Name=TGC93484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=C9F09_10955;product=hypothetical protein;protein_id=TGC93484.1;transl_table=11 PYKB01000716.1 Genbank gene 1610 2983 . + . ID=gene-C9F09_10960;Name=C9F09_10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10960 PYKB01000716.1 Protein Homology CDS 1610 2983 . + 0 ID=cds-TGC93485.1;Parent=gene-C9F09_10960;Dbxref=NCBI_GP:TGC93485.1;Name=TGC93485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=C9F09_10960;product=Secreted effector kinase SteC;protein_id=TGC93485.1;transl_table=11 PYKB01000716.1 Genbank pseudogene 3449 4063 . + . ID=gene-C9F09_10965;Name=C9F09_10965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10965;pseudo=true PYKB01000716.1 Protein Homology CDS 3449 4063 . + 0 ID=cds-C9F09_10965;Parent=gene-C9F09_10965;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455799.1;locus_tag=C9F09_10965;product=diguanylate phosphodiesterase;pseudo=true;transl_table=11 ##sequence-region PYKB01000642.1 1 4117 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000642.1 Genbank region 1 4117 . + . ID=PYKB01000642.1:1..4117;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000642.1 Genbank gene 1 1456 . - . ID=gene-C9F09_09640;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=C9F09_09640;partial=true;start_range=.,1 PYKB01000642.1 Protein Homology CDS 1 1456 . - 0 ID=cds-TGC94516.1;Parent=gene-C9F09_09640;Dbxref=NCBI_GP:TGC94516.1;Name=TGC94516.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=C9F09_09640;partial=true;product=excinuclease ABC subunit C;protein_id=TGC94516.1;start_range=.,1;transl_table=11 PYKB01000642.1 Genbank gene 1453 2109 . - . ID=gene-C9F09_09645;Name=C9F09_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09645 PYKB01000642.1 Protein Homology CDS 1453 2109 . - 0 ID=cds-TGC94517.1;Parent=gene-C9F09_09645;Dbxref=NCBI_GP:TGC94517.1;Name=TGC94517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456510.1;locus_tag=C9F09_09645;product=two-component system response regulator UvrY;protein_id=TGC94517.1;transl_table=11 PYKB01000642.1 Genbank gene 2421 2576 . + . ID=gene-C9F09_09650;Name=C9F09_09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09650 PYKB01000642.1 Protein Homology CDS 2421 2576 . + 0 ID=cds-TGC94518.1;Parent=gene-C9F09_09650;Dbxref=NCBI_GP:TGC94518.1;Name=TGC94518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=C9F09_09650;product=hypothetical protein;protein_id=TGC94518.1;transl_table=11 PYKB01000642.1 Genbank gene 2573 2797 . + . ID=gene-C9F09_09655;Name=C9F09_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09655 PYKB01000642.1 Protein Homology CDS 2573 2797 . + 0 ID=cds-TGC94519.1;Parent=gene-C9F09_09655;Dbxref=NCBI_GP:TGC94519.1;Name=TGC94519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456512.1;locus_tag=C9F09_09655;product=hypothetical protein;protein_id=TGC94519.1;transl_table=11 PYKB01000642.1 Genbank gene 2864 3586 . - . ID=gene-C9F09_09660;Name=C9F09_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09660 PYKB01000642.1 Protein Homology CDS 2864 3586 . - 0 ID=cds-TGC94520.1;Parent=gene-C9F09_09660;Dbxref=NCBI_GP:TGC94520.1;Name=TGC94520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456513.1;locus_tag=C9F09_09660;product=transcriptional regulator SdiA;protein_id=TGC94520.1;transl_table=11 PYKB01000642.1 Genbank gene 3819 4117 . - . ID=gene-C9F09_09665;Name=C9F09_09665;end_range=4117,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09665;partial=true PYKB01000642.1 Protein Homology CDS 3819 4117 . - 2 ID=cds-TGC94521.1;Parent=gene-C9F09_09665;Dbxref=NCBI_GP:TGC94521.1;Name=TGC94521.1;end_range=4117,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456514.1;locus_tag=C9F09_09665;partial=true;product=L-cystine ABC transporter ATP-binding protein YecC;protein_id=TGC94521.1;transl_table=11 ##sequence-region PYKB01001524.1 1 11878 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001524.1 Genbank region 1 11878 . + . ID=PYKB01001524.1:1..11878;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001524.1 Genbank gene 1 1192 . + . ID=gene-C9F09_26435;Name=C9F09_26435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26435;partial=true;start_range=.,1 PYKB01001524.1 Protein Homology CDS 1 1192 . + 1 ID=cds-TGC76672.1;Parent=gene-C9F09_26435;Dbxref=NCBI_GP:TGC76672.1;Name=TGC76672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455902.1;locus_tag=C9F09_26435;partial=true;product=hypothetical protein;protein_id=TGC76672.1;start_range=.,1;transl_table=11 PYKB01001524.1 Genbank gene 1189 3333 . + . ID=gene-C9F09_26440;Name=C9F09_26440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26440 PYKB01001524.1 Protein Homology CDS 1189 3333 . + 0 ID=cds-TGC76673.1;Parent=gene-C9F09_26440;Dbxref=NCBI_GP:TGC76673.1;Name=TGC76673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455901.1;locus_tag=C9F09_26440;product=virulence effector SrfC;protein_id=TGC76673.1;transl_table=11 PYKB01001524.1 Genbank gene 3378 3641 . - . ID=gene-C9F09_26445;Name=C9F09_26445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26445 PYKB01001524.1 Protein Homology CDS 3378 3641 . - 0 ID=cds-TGC76674.1;Parent=gene-C9F09_26445;Dbxref=NCBI_GP:TGC76674.1;Name=TGC76674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460555.1;locus_tag=C9F09_26445;product=hypothetical protein;protein_id=TGC76674.1;transl_table=11 PYKB01001524.1 Genbank gene 3750 3845 . + . ID=gene-C9F09_26450;Name=C9F09_26450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26450 PYKB01001524.1 Protein Homology CDS 3750 3845 . + 0 ID=cds-TGC76675.1;Parent=gene-C9F09_26450;Dbxref=NCBI_GP:TGC76675.1;Name=TGC76675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=C9F09_26450;product=stress response membrane protein YncL;protein_id=TGC76675.1;transl_table=11 PYKB01001524.1 Genbank gene 3950 5395 . - . ID=gene-C9F09_26455;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=C9F09_26455 PYKB01001524.1 Protein Homology CDS 3950 5395 . - 0 ID=cds-TGC76676.1;Parent=gene-C9F09_26455;Dbxref=NCBI_GP:TGC76676.1;Name=TGC76676.1;gbkey=CDS;gene=patD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455900.3;locus_tag=C9F09_26455;product=aminobutyraldehyde dehydrogenase;protein_id=TGC76676.1;transl_table=11 PYKB01001524.1 Genbank gene 5510 6934 . - . ID=gene-C9F09_26460;Name=C9F09_26460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26460 PYKB01001524.1 Protein Homology CDS 5510 6934 . - 0 ID=cds-TGC76677.1;Parent=gene-C9F09_26460;Dbxref=NCBI_GP:TGC76677.1;Name=TGC76677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=C9F09_26460;product=GntR family transcriptional regulator;protein_id=TGC76677.1;transl_table=11 PYKB01001524.1 Genbank gene 7070 7840 . - . ID=gene-C9F09_26465;Name=C9F09_26465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26465 PYKB01001524.1 Protein Homology CDS 7070 7840 . - 0 ID=cds-TGC76678.1;Parent=gene-C9F09_26465;Dbxref=NCBI_GP:TGC76678.1;Name=TGC76678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455898.1;locus_tag=C9F09_26465;product=D-alanyl-D-alanine dipeptidase;protein_id=TGC76678.1;transl_table=11 PYKB01001524.1 Genbank gene 8100 8330 . - . ID=gene-C9F09_26470;Name=C9F09_26470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26470 PYKB01001524.1 Protein Homology CDS 8100 8330 . - 0 ID=cds-TGC76679.1;Parent=gene-C9F09_26470;Dbxref=NCBI_GP:TGC76679.1;Name=TGC76679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=C9F09_26470;product=hypothetical protein;protein_id=TGC76679.1;transl_table=11 PYKB01001524.1 Genbank gene 8363 8761 . - . ID=gene-C9F09_26475;Name=C9F09_26475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26475 PYKB01001524.1 Protein Homology CDS 8363 8761 . - 0 ID=cds-TGC76680.1;Parent=gene-C9F09_26475;Dbxref=NCBI_GP:TGC76680.1;Name=TGC76680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455896.1;locus_tag=C9F09_26475;product=D-alanyl-D-alanine dipeptidase;protein_id=TGC76680.1;transl_table=11 PYKB01001524.1 Genbank gene 9276 10226 . + . ID=gene-C9F09_26480;Name=C9F09_26480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26480 PYKB01001524.1 Protein Homology CDS 9276 10226 . + 0 ID=cds-TGC76681.1;Parent=gene-C9F09_26480;Dbxref=NCBI_GP:TGC76681.1;Name=TGC76681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=C9F09_26480;product=type III secretion system effector SifB;protein_id=TGC76681.1;transl_table=11 PYKB01001524.1 Genbank gene 10499 10729 . + . ID=gene-C9F09_26485;Name=C9F09_26485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26485 PYKB01001524.1 Protein Homology CDS 10499 10729 . + 0 ID=cds-TGC76683.1;Parent=gene-C9F09_26485;Dbxref=NCBI_GP:TGC76683.1;Name=TGC76683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455894.1;locus_tag=C9F09_26485;product=DUF2554 domain-containing protein;protein_id=TGC76683.1;transl_table=11 PYKB01001524.1 Genbank gene 10730 11878 . - . ID=gene-C9F09_26490;Name=C9F09_26490;end_range=11878,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26490;partial=true PYKB01001524.1 Protein Homology CDS 10730 11878 . - 0 ID=cds-TGC76682.1;Parent=gene-C9F09_26490;Dbxref=NCBI_GP:TGC76682.1;Name=TGC76682.1;end_range=11878,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=C9F09_26490;partial=true;product=hypothetical protein;protein_id=TGC76682.1;transl_table=11 ##sequence-region PYKB01001635.1 1 4107 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001635.1 Genbank region 1 4107 . + . ID=PYKB01001635.1:1..4107;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001635.1 Genbank gene 1 1644 . - . ID=gene-C9F09_28580;Name=C9F09_28580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28580;partial=true;start_range=.,1 PYKB01001635.1 Protein Homology CDS 1 1644 . - 0 ID=cds-TGC73935.1;Parent=gene-C9F09_28580;Dbxref=NCBI_GP:TGC73935.1;Name=TGC73935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458117.1;locus_tag=C9F09_28580;partial=true;product=trimethylamine-N-oxide reductase TorA;protein_id=TGC73935.1;start_range=.,1;transl_table=11 PYKB01001635.1 Genbank gene 1634 2818 . - . ID=gene-C9F09_28585;Name=C9F09_28585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28585 PYKB01001635.1 Protein Homology CDS 1634 2818 . - 0 ID=cds-TGC73936.1;Parent=gene-C9F09_28585;Dbxref=NCBI_GP:TGC73936.1;Name=TGC73936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=C9F09_28585;product=pentaheme c-type cytochrome TorC;protein_id=TGC73936.1;transl_table=11 PYKB01001635.1 Genbank gene 2948 3640 . + . ID=gene-C9F09_28590;Name=C9F09_28590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28590 PYKB01001635.1 Protein Homology CDS 2948 3640 . + 0 ID=cds-TGC73937.1;Parent=gene-C9F09_28590;Dbxref=NCBI_GP:TGC73937.1;Name=TGC73937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=C9F09_28590;product=two-component system response regulator TorR;protein_id=TGC73937.1;transl_table=11 PYKB01001635.1 Genbank pseudogene 3613 4107 . - . ID=gene-C9F09_28595;Name=C9F09_28595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28595;pseudo=true PYKB01001635.1 Protein Homology CDS 3613 4107 . - 2 ID=cds-C9F09_28595;Parent=gene-C9F09_28595;Note=frameshifted%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458116.1;locus_tag=C9F09_28595;product=TMAO reductase system protein TorT;pseudo=true;transl_table=11 ##sequence-region PYKB01000473.1 1 4095 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000473.1 Genbank region 1 4095 . + . ID=PYKB01000473.1:1..4095;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000473.1 Genbank gene 1 767 . + . ID=gene-C9F09_05915;Name=C9F09_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05915;partial=true;start_range=.,1 PYKB01000473.1 Protein Homology CDS 1 767 . + 2 ID=cds-TGC98244.1;Parent=gene-C9F09_05915;Dbxref=NCBI_GP:TGC98244.1;Name=TGC98244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=C9F09_05915;partial=true;product=glutathione ABC transporter permease GsiC;protein_id=TGC98244.1;start_range=.,1;transl_table=11 PYKB01000473.1 Genbank gene 770 1681 . + . ID=gene-C9F09_05920;Name=C9F09_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05920 PYKB01000473.1 Protein Homology CDS 770 1681 . + 0 ID=cds-TGC98240.1;Parent=gene-C9F09_05920;Dbxref=NCBI_GP:TGC98240.1;Name=TGC98240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455385.1;locus_tag=C9F09_05920;product=glutathione ABC transporter permease GsiD;protein_id=TGC98240.1;transl_table=11 PYKB01000473.1 Genbank gene 1772 3097 . - . ID=gene-C9F09_05925;Name=C9F09_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05925 PYKB01000473.1 Protein Homology CDS 1772 3097 . - 0 ID=cds-TGC98241.1;Parent=gene-C9F09_05925;Dbxref=NCBI_GP:TGC98241.1;Name=TGC98241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=C9F09_05925;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=TGC98241.1;transl_table=11 PYKB01000473.1 Genbank gene 3328 3711 . + . ID=gene-C9F09_05930;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;gene_synonym=yliH;locus_tag=C9F09_05930 PYKB01000473.1 Protein Homology CDS 3328 3711 . + 0 ID=cds-TGC98242.1;Parent=gene-C9F09_05930;Dbxref=NCBI_GP:TGC98242.1;Name=TGC98242.1;Note=BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455387.1;locus_tag=C9F09_05930;product=transcriptional regulator;protein_id=TGC98242.1;transl_table=11 PYKB01000473.1 Genbank gene 3830 4095 . + . ID=gene-C9F09_05935;Name=C9F09_05935;end_range=4095,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05935;partial=true PYKB01000473.1 Protein Homology CDS 3830 4095 . + 0 ID=cds-TGC98243.1;Parent=gene-C9F09_05935;Dbxref=NCBI_GP:TGC98243.1;Name=TGC98243.1;end_range=4095,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455388.1;locus_tag=C9F09_05935;partial=true;product=oxidoreductase;protein_id=TGC98243.1;transl_table=11 ##sequence-region PYKB01000550.1 1 4089 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000550.1 Genbank region 1 4089 . + . ID=PYKB01000550.1:1..4089;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000550.1 Genbank gene 1 1080 . - . ID=gene-C9F09_07585;Name=C9F09_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07585;partial=true;start_range=.,1 PYKB01000550.1 Protein Homology CDS 1 1080 . - 0 ID=cds-TGC96494.1;Parent=gene-C9F09_07585;Dbxref=NCBI_GP:TGC96494.1;Name=TGC96494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454616.1;locus_tag=C9F09_07585;partial=true;product=sodium:alanine symporter family protein;protein_id=TGC96494.1;start_range=.,1;transl_table=11 PYKB01000550.1 Genbank gene 1349 2302 . + . ID=gene-C9F09_07590;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=C9F09_07590 PYKB01000550.1 Protein Homology CDS 1349 2302 . + 0 ID=cds-TGC96495.1;Parent=gene-C9F09_07590;Dbxref=NCBI_GP:TGC96495.1;Name=TGC96495.1;gbkey=CDS;gene=tal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454617.1;locus_tag=C9F09_07590;product=transaldolase;protein_id=TGC96495.1;transl_table=11 PYKB01000550.1 Genbank gene 2413 3003 . + . ID=gene-C9F09_07595;Name=C9F09_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07595 PYKB01000550.1 Protein Homology CDS 2413 3003 . + 0 ID=cds-TGC96496.1;Parent=gene-C9F09_07595;Dbxref=NCBI_GP:TGC96496.1;Name=TGC96496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454618.1;locus_tag=C9F09_07595;product=molybdopterin adenylyltransferase;protein_id=TGC96496.1;transl_table=11 PYKB01000550.1 Genbank pseudogene 3060 3626 . - . ID=gene-C9F09_07600;Name=C9F09_07600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07600;pseudo=true PYKB01000550.1 Protein Homology CDS 3060 3626 . - 0 ID=cds-C9F09_07600;Parent=gene-C9F09_07600;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454619.1;locus_tag=C9F09_07600;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000550.1 Genbank gene 3776 4089 . - . ID=gene-C9F09_07605;Name=C9F09_07605;end_range=4089,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07605;partial=true PYKB01000550.1 Protein Homology CDS 3776 4089 . - 2 ID=cds-TGC96497.1;Parent=gene-C9F09_07605;Dbxref=NCBI_GP:TGC96497.1;Name=TGC96497.1;end_range=4089,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454620.1;locus_tag=C9F09_07605;partial=true;product=hypothetical protein;protein_id=TGC96497.1;transl_table=11 ##sequence-region PYKB01001627.1 1 4087 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001627.1 Genbank region 1 4087 . + . ID=PYKB01001627.1:1..4087;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001627.1 Genbank gene 1 891 . - . ID=gene-C9F09_28465;Name=C9F09_28465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28465;partial=true;start_range=.,1 PYKB01001627.1 Protein Homology CDS 1 891 . - 0 ID=cds-TGC74108.1;Parent=gene-C9F09_28465;Dbxref=NCBI_GP:TGC74108.1;Name=TGC74108.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456674.1;locus_tag=C9F09_28465;partial=true;product=multidrug transporter subunit MdtC;protein_id=TGC74108.1;start_range=.,1;transl_table=11 PYKB01001627.1 Genbank gene 892 3972 . - . ID=gene-C9F09_28470;Name=C9F09_28470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28470 PYKB01001627.1 Protein Homology CDS 892 3972 . - 0 ID=cds-TGC74109.1;Parent=gene-C9F09_28470;Dbxref=NCBI_GP:TGC74109.1;Name=TGC74109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001161773.1;locus_tag=C9F09_28470;product=multidrug transporter subunit MdtB;protein_id=TGC74109.1;transl_table=11 ##sequence-region PYKB01001491.1 1 4087 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001491.1 Genbank region 1 4087 . + . ID=PYKB01001491.1:1..4087;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001491.1 Genbank gene 156 902 . - . ID=gene-C9F09_25895;Name=C9F09_25895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25895 PYKB01001491.1 Protein Homology CDS 156 902 . - 0 ID=cds-TGC77470.1;Parent=gene-C9F09_25895;Dbxref=NCBI_GP:TGC77470.1;Name=TGC77470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457968.1;locus_tag=C9F09_25895;product=ferredoxin--NADP(+) reductase;protein_id=TGC77470.1;transl_table=11 PYKB01001491.1 Genbank gene 999 2009 . - . ID=gene-C9F09_25900;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=C9F09_25900 PYKB01001491.1 Protein Homology CDS 999 2009 . - 0 ID=cds-TGC77471.1;Parent=gene-C9F09_25900;Dbxref=NCBI_GP:TGC77471.1;Name=TGC77471.1;gbkey=CDS;gene=glpX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=C9F09_25900;product=fructose-bisphosphatase class II;protein_id=TGC77471.1;transl_table=11 PYKB01001491.1 Genbank gene 2121 3629 . - . ID=gene-C9F09_25905;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=C9F09_25905 PYKB01001491.1 Protein Homology CDS 2121 3629 . - 0 ID=cds-TGC77472.1;Parent=gene-C9F09_25905;Dbxref=NCBI_GP:TGC77472.1;Name=TGC77472.1;gbkey=CDS;gene=glpK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=C9F09_25905;product=glycerol kinase;protein_id=TGC77472.1;transl_table=11 PYKB01001491.1 Genbank gene 3650 4087 . - . ID=gene-C9F09_25910;Name=C9F09_25910;end_range=4087,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25910;partial=true PYKB01001491.1 Protein Homology CDS 3650 4087 . - 0 ID=cds-TGC77473.1;Parent=gene-C9F09_25910;Dbxref=NCBI_GP:TGC77473.1;Name=TGC77473.1;end_range=4087,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=C9F09_25910;partial=true;product=aquaporin;protein_id=TGC77473.1;transl_table=11 ##sequence-region PYKB01000707.1 1 4079 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000707.1 Genbank region 1 4079 . + . ID=PYKB01000707.1:1..4079;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000707.1 Genbank gene 1 90 . + . ID=gene-C9F09_10750;Name=C9F09_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10750;partial=true;start_range=.,1 PYKB01000707.1 Protein Homology CDS 1 90 . + 0 ID=cds-TGC93615.1;Parent=gene-C9F09_10750;Dbxref=NCBI_GP:TGC93615.1;Name=TGC93615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457269.1;locus_tag=C9F09_10750;partial=true;product=AraC family transcriptional regulator;protein_id=TGC93615.1;start_range=.,1;transl_table=11 PYKB01000707.1 Genbank gene 1179 2840 . + . ID=gene-C9F09_10755;Name=C9F09_10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10755 PYKB01000707.1 Protein Homology CDS 1179 2840 . + 0 ID=cds-TGC93616.1;Parent=gene-C9F09_10755;Dbxref=NCBI_GP:TGC93616.1;Name=TGC93616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=C9F09_10755;product=transcriptional regulator;protein_id=TGC93616.1;transl_table=11 PYKB01000707.1 Genbank gene 2858 3340 . + . ID=gene-C9F09_10760;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=C9F09_10760 PYKB01000707.1 Protein Homology CDS 2858 3340 . + 0 ID=cds-TGC93617.1;Parent=gene-C9F09_10760;Dbxref=NCBI_GP:TGC93617.1;Name=TGC93617.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=C9F09_10760;product=SPI-1 type III secretion system invasion protein IagB;protein_id=TGC93617.1;transl_table=11 PYKB01000707.1 Genbank gene 3394 4079 . - . ID=gene-C9F09_10765;Name=sptP;end_range=4079,.;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=C9F09_10765;partial=true PYKB01000707.1 Protein Homology CDS 3394 4079 . - 2 ID=cds-TGC93618.1;Parent=gene-C9F09_10765;Dbxref=NCBI_GP:TGC93618.1;Name=TGC93618.1;end_range=4079,.;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=C9F09_10765;partial=true;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=TGC93618.1;transl_table=11 ##sequence-region PYKB01001464.1 1 4073 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001464.1 Genbank region 1 4073 . + . ID=PYKB01001464.1:1..4073;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001464.1 Genbank gene 1 459 . - . ID=gene-C9F09_25485;Name=C9F09_25485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25485;partial=true;start_range=.,1 PYKB01001464.1 Protein Homology CDS 1 459 . - 0 ID=cds-TGC77927.1;Parent=gene-C9F09_25485;Dbxref=NCBI_GP:TGC77927.1;Name=TGC77927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456769.1;locus_tag=C9F09_25485;partial=true;product=hypothetical protein;protein_id=TGC77927.1;start_range=.,1;transl_table=11 PYKB01001464.1 Genbank gene 671 1243 . - . ID=gene-C9F09_25490;Name=C9F09_25490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25490 PYKB01001464.1 Protein Homology CDS 671 1243 . - 0 ID=cds-TGC77928.1;Parent=gene-C9F09_25490;Dbxref=NCBI_GP:TGC77928.1;Name=TGC77928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311090.2;locus_tag=C9F09_25490;product=elongation factor P-like protein YeiP;protein_id=TGC77928.1;transl_table=11 PYKB01001464.1 Genbank gene 1567 1821 . + . ID=gene-C9F09_25495;Name=C9F09_25495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25495 PYKB01001464.1 Protein Homology CDS 1567 1821 . + 0 ID=cds-TGC77929.1;Parent=gene-C9F09_25495;Dbxref=NCBI_GP:TGC77929.1;Name=TGC77929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859353.1;locus_tag=C9F09_25495;product=zinc/iron-chelating domain-containing protein;protein_id=TGC77929.1;transl_table=11 PYKB01001464.1 Genbank gene 1823 1936 . - . ID=gene-C9F09_25500;Name=C9F09_25500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25500 PYKB01001464.1 Protein Homology CDS 1823 1936 . - 0 ID=cds-TGC77930.1;Parent=gene-C9F09_25500;Dbxref=NCBI_GP:TGC77930.1;Name=TGC77930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219073.1;locus_tag=C9F09_25500;product=DNA metabolism protein;protein_id=TGC77930.1;transl_table=11 PYKB01001464.1 Genbank gene 2359 2481 . + . ID=gene-C9F09_25505;Name=C9F09_25505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25505 PYKB01001464.1 Protein Homology CDS 2359 2481 . + 0 ID=cds-TGC77931.1;Parent=gene-C9F09_25505;Dbxref=NCBI_GP:TGC77931.1;Name=TGC77931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=C9F09_25505;product=hypothetical protein;protein_id=TGC77931.1;transl_table=11 PYKB01001464.1 Genbank gene 2483 3148 . + . ID=gene-C9F09_25510;Name=C9F09_25510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25510 PYKB01001464.1 Protein Homology CDS 2483 3148 . + 0 ID=cds-TGC77932.1;Parent=gene-C9F09_25510;Dbxref=NCBI_GP:TGC77932.1;Name=TGC77932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456766.1;locus_tag=C9F09_25510;product=hypothetical protein;protein_id=TGC77932.1;transl_table=11 PYKB01001464.1 Genbank gene 3213 4073 . - . ID=gene-C9F09_25515;Name=C9F09_25515;end_range=4073,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25515;partial=true PYKB01001464.1 Protein Homology CDS 3213 4073 . - 0 ID=cds-TGC77933.1;Parent=gene-C9F09_25515;Dbxref=NCBI_GP:TGC77933.1;Name=TGC77933.1;end_range=4073,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456765.1;locus_tag=C9F09_25515;partial=true;product=MFS transporter;protein_id=TGC77933.1;transl_table=11 ##sequence-region PYKB01000058.1 1 4064 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000058.1 Genbank region 1 4064 . + . ID=PYKB01000058.1:1..4064;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000058.1 Genbank gene 1 1821 . - . ID=gene-C9F09_00660;Name=C9F09_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00660;partial=true;start_range=.,1 PYKB01000058.1 Protein Homology CDS 1 1821 . - 0 ID=cds-TGD06304.1;Parent=gene-C9F09_00660;Dbxref=NCBI_GP:TGD06304.1;Name=TGD06304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=C9F09_00660;partial=true;product=penicillin-binding protein 1C;protein_id=TGD06304.1;start_range=.,1;transl_table=11 PYKB01000058.1 Genbank gene 1822 4064 . - . ID=gene-C9F09_00665;Name=C9F09_00665;end_range=4064,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00665;partial=true PYKB01000058.1 Protein Homology CDS 1822 4064 . - 2 ID=cds-TGD06305.1;Parent=gene-C9F09_00665;Dbxref=NCBI_GP:TGD06305.1;Name=TGD06305.1;end_range=4064,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457063.1;locus_tag=C9F09_00665;partial=true;product=hypothetical protein;protein_id=TGD06305.1;transl_table=11 ##sequence-region PYKB01000652.1 1 4060 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000652.1 Genbank region 1 4060 . + . ID=PYKB01000652.1:1..4060;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000652.1 Genbank pseudogene 22 678 . - . ID=gene-C9F09_09770;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=pseudogene;locus_tag=C9F09_09770;pseudo=true PYKB01000652.1 Protein Homology CDS 22 678 . - 0 ID=cds-C9F09_09770;Parent=gene-C9F09_09770;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=tsaD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004590947.1;locus_tag=C9F09_09770;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;pseudo=true;transl_table=11 PYKB01000652.1 Genbank gene 906 1121 . + . ID=gene-C9F09_09775;Name=C9F09_09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09775 PYKB01000652.1 Protein Homology CDS 906 1121 . + 0 ID=cds-TGC94358.1;Parent=gene-C9F09_09775;Dbxref=NCBI_GP:TGC94358.1;Name=TGC94358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=C9F09_09775;product=30S ribosomal protein S21;protein_id=TGC94358.1;transl_table=11 PYKB01000652.1 Genbank gene 1357 3102 . + . ID=gene-C9F09_09780;Name=C9F09_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09780 PYKB01000652.1 Protein Homology CDS 1357 3102 . + 0 ID=cds-TGC94359.1;Parent=gene-C9F09_09780;Dbxref=NCBI_GP:TGC94359.1;Name=TGC94359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=C9F09_09780;product=DNA primase;protein_id=TGC94359.1;transl_table=11 PYKB01000652.1 Genbank gene 3117 4060 . + . ID=gene-C9F09_09785;Name=C9F09_09785;end_range=4060,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09785;partial=true PYKB01000652.1 Protein Homology CDS 3117 4060 . + 0 ID=cds-TGC94360.1;Parent=gene-C9F09_09785;Dbxref=NCBI_GP:TGC94360.1;Name=TGC94360.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;end_range=4060,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462126.3;locus_tag=C9F09_09785;partial=true;product=RNA polymerase sigma factor RpoD;protein_id=TGC94360.1;transl_table=11 ##sequence-region PYKB01001679.1 1 4049 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001679.1 Genbank region 1 4049 . + . ID=PYKB01001679.1:1..4049;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001679.1 Genbank gene 88 1446 . - . ID=gene-C9F09_29185;Name=C9F09_29185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29185 PYKB01001679.1 Protein Homology CDS 88 1446 . - 0 ID=cds-TGC72804.1;Parent=gene-C9F09_29185;Dbxref=NCBI_GP:TGC72804.1;Name=TGC72804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456738.1;locus_tag=C9F09_29185;product=aromatic acid/H+ symport family MFS transporter;protein_id=TGC72804.1;transl_table=11 PYKB01001679.1 Genbank gene 1572 2480 . + . ID=gene-C9F09_29190;Name=C9F09_29190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29190 PYKB01001679.1 Protein Homology CDS 1572 2480 . + 0 ID=cds-TGC72805.1;Parent=gene-C9F09_29190;Dbxref=NCBI_GP:TGC72805.1;Name=TGC72805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456739.1;locus_tag=C9F09_29190;product=LysR family transcriptional regulator;protein_id=TGC72805.1;transl_table=11 PYKB01001679.1 Genbank gene 2612 3010 . + . ID=gene-C9F09_29195;Name=C9F09_29195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29195 PYKB01001679.1 Protein Homology CDS 2612 3010 . + 0 ID=cds-TGC72806.1;Parent=gene-C9F09_29195;Dbxref=NCBI_GP:TGC72806.1;Name=TGC72806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456740.1;locus_tag=C9F09_29195;product=hypothetical protein;protein_id=TGC72806.1;transl_table=11 PYKB01001679.1 Genbank gene 3007 3702 . + . ID=gene-C9F09_29200;Name=C9F09_29200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29200 PYKB01001679.1 Protein Homology CDS 3007 3702 . + 0 ID=cds-TGC72807.1;Parent=gene-C9F09_29200;Dbxref=NCBI_GP:TGC72807.1;Name=TGC72807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456741.1;locus_tag=C9F09_29200;product=CidB/LrgB family autolysis modulator;protein_id=TGC72807.1;transl_table=11 PYKB01001679.1 Genbank gene 3856 4049 . + . ID=gene-C9F09_29205;Name=C9F09_29205;end_range=4049,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29205;partial=true PYKB01001679.1 Protein Homology CDS 3856 4049 . + 0 ID=cds-TGC72808.1;Parent=gene-C9F09_29205;Dbxref=NCBI_GP:TGC72808.1;Name=TGC72808.1;Note=Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis;end_range=4049,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456742.1;locus_tag=C9F09_29205;partial=true;product=cytidine deaminase;protein_id=TGC72808.1;transl_table=11 ##sequence-region PYKB01001499.1 1 11584 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001499.1 Genbank region 1 11584 . + . ID=PYKB01001499.1:1..11584;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001499.1 Genbank gene 1 450 . - . ID=gene-C9F09_26000;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=C9F09_26000;partial=true;start_range=.,1 PYKB01001499.1 Protein Homology CDS 1 450 . - 0 ID=cds-TGC77312.1;Parent=gene-C9F09_26000;Dbxref=NCBI_GP:TGC77312.1;Name=TGC77312.1;Note=can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotC is a membrane component;gbkey=CDS;gene=potC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455715.1;locus_tag=C9F09_26000;partial=true;product=spermidine/putrescine ABC transporter permease PotC;protein_id=TGC77312.1;start_range=.,1;transl_table=11 PYKB01001499.1 Genbank gene 766 1776 . - . ID=gene-C9F09_26005;Name=C9F09_26005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26005 PYKB01001499.1 Protein Homology CDS 766 1776 . - 0 ID=cds-TGC77313.1;Parent=gene-C9F09_26005;Dbxref=NCBI_GP:TGC77313.1;Name=TGC77313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=C9F09_26005;product=type III secretion system effector SifA;protein_id=TGC77313.1;transl_table=11 PYKB01001499.1 Genbank gene 2105 2968 . - . ID=gene-C9F09_26010;Name=C9F09_26010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26010 PYKB01001499.1 Protein Homology CDS 2105 2968 . - 0 ID=cds-TGC77314.1;Parent=gene-C9F09_26010;Dbxref=NCBI_GP:TGC77314.1;Name=TGC77314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455717.1;locus_tag=C9F09_26010;product=spermidine/putrescine ABC transporter permease;protein_id=TGC77314.1;transl_table=11 PYKB01001499.1 Genbank gene 2952 4088 . - . ID=gene-C9F09_26015;Name=C9F09_26015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26015 PYKB01001499.1 Protein Homology CDS 2952 4088 . - 0 ID=cds-TGC77315.1;Parent=gene-C9F09_26015;Dbxref=NCBI_GP:TGC77315.1;Name=TGC77315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=C9F09_26015;product=Fe3+/spermidine/putrescine ABC transporter ATP-binding protein;protein_id=TGC77315.1;transl_table=11 PYKB01001499.1 Genbank gene 4339 5568 . + . ID=gene-C9F09_26020;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=C9F09_26020 PYKB01001499.1 Protein Homology CDS 4339 5568 . + 0 ID=cds-TGC77316.1;Parent=gene-C9F09_26020;Dbxref=NCBI_GP:TGC77316.1;Name=TGC77316.1;gbkey=CDS;gene=pepT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=C9F09_26020;product=peptidase T;protein_id=TGC77316.1;transl_table=11 PYKB01001499.1 Genbank gene 5572 6906 . + . ID=gene-C9F09_26025;Name=C9F09_26025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26025 PYKB01001499.1 Protein Homology CDS 5572 6906 . + 0 ID=cds-TGC77317.1;Parent=gene-C9F09_26025;Dbxref=NCBI_GP:TGC77317.1;Name=TGC77317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455720.1;locus_tag=C9F09_26025;product=hypothetical protein;protein_id=TGC77317.1;transl_table=11 PYKB01001499.1 Genbank gene 6946 8067 . - . ID=gene-C9F09_26030;Name=C9F09_26030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26030 PYKB01001499.1 Protein Homology CDS 6946 8067 . - 0 ID=cds-TGC77318.1;Parent=gene-C9F09_26030;Dbxref=NCBI_GP:TGC77318.1;Name=TGC77318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=C9F09_26030;product=cupin domain-containing protein;protein_id=TGC77318.1;transl_table=11 PYKB01001499.1 Genbank gene 8148 9611 . - . ID=gene-C9F09_26035;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=C9F09_26035 PYKB01001499.1 Protein Homology CDS 8148 9611 . - 0 ID=cds-TGC77319.1;Parent=gene-C9F09_26035;Dbxref=NCBI_GP:TGC77319.1;Name=TGC77319.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=C9F09_26035;product=two-component system sensor histidine kinase PhoQ;protein_id=TGC77319.1;transl_table=11 PYKB01001499.1 Genbank gene 9611 10285 . - . ID=gene-C9F09_26040;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=C9F09_26040 PYKB01001499.1 Protein Homology CDS 9611 10285 . - 0 ID=cds-TGC77320.1;Parent=gene-C9F09_26040;Dbxref=NCBI_GP:TGC77320.1;Name=TGC77320.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460201.1;locus_tag=C9F09_26040;product=two-component system response regulator PhoP;protein_id=TGC77320.1;transl_table=11 PYKB01001499.1 Genbank gene 10409 11584 . - . ID=gene-C9F09_26045;Name=C9F09_26045;end_range=11584,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26045;partial=true PYKB01001499.1 Protein Homology CDS 10409 11584 . - 0 ID=cds-TGC77321.1;Parent=gene-C9F09_26045;Dbxref=NCBI_GP:TGC77321.1;Name=TGC77321.1;end_range=11584,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819529.1;locus_tag=C9F09_26045;partial=true;product=adenylosuccinate lyase;protein_id=TGC77321.1;transl_table=11 ##sequence-region PYKB01001441.1 1 18726 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001441.1 Genbank region 1 18726 . + . ID=PYKB01001441.1:1..18726;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001441.1 Genbank gene 141 1121 . - . ID=gene-C9F09_24875;Name=C9F09_24875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24875 PYKB01001441.1 Protein Homology CDS 141 1121 . - 0 ID=cds-TGC78507.1;Parent=gene-C9F09_24875;Dbxref=NCBI_GP:TGC78507.1;Name=TGC78507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457446.1;locus_tag=C9F09_24875;product=tRNA-modifying protein YgfZ;protein_id=TGC78507.1;transl_table=11 PYKB01001441.1 Genbank gene 1136 1372 . - . ID=gene-C9F09_24880;Name=C9F09_24880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24880 PYKB01001441.1 Protein Homology CDS 1136 1372 . - 0 ID=cds-TGC78508.1;Parent=gene-C9F09_24880;Dbxref=NCBI_GP:TGC78508.1;Name=TGC78508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991993.1;locus_tag=C9F09_24880;product=hypothetical protein;protein_id=TGC78508.1;transl_table=11 PYKB01001441.1 Genbank gene 1371 1637 . + . ID=gene-C9F09_24885;Name=C9F09_24885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24885 PYKB01001441.1 Protein Homology CDS 1371 1637 . + 0 ID=cds-TGC78509.1;Parent=gene-C9F09_24885;Dbxref=NCBI_GP:TGC78509.1;Name=TGC78509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=C9F09_24885;product=FAD assembly factor SdhE;protein_id=TGC78509.1;transl_table=11 PYKB01001441.1 Genbank gene 1618 2031 . + . ID=gene-C9F09_24890;Name=C9F09_24890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24890 PYKB01001441.1 Protein Homology CDS 1618 2031 . + 0 ID=cds-TGC78510.1;Parent=gene-C9F09_24890;Dbxref=NCBI_GP:TGC78510.1;Name=TGC78510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=C9F09_24890;product=hypothetical protein;protein_id=TGC78510.1;transl_table=11 PYKB01001441.1 Genbank gene 2084 2605 . - . ID=gene-C9F09_24895;Name=C9F09_24895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24895 PYKB01001441.1 Protein Homology CDS 2084 2605 . - 0 ID=cds-TGC78511.1;Parent=gene-C9F09_24895;Dbxref=NCBI_GP:TGC78511.1;Name=TGC78511.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457443.1;locus_tag=C9F09_24895;product=flavodoxin FldB;protein_id=TGC78511.1;transl_table=11 PYKB01001441.1 Genbank pseudogene 2718 3614 . + . ID=gene-C9F09_24900;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=pseudogene;locus_tag=C9F09_24900;pseudo=true PYKB01001441.1 Protein Homology CDS 2718 3614 . + 0 ID=cds-C9F09_24900;Parent=gene-C9F09_24900;Note=internal stop;gbkey=CDS;gene=xerD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457442.1;locus_tag=C9F09_24900;product=site-specific tyrosine recombinase XerD;pseudo=true;transl_table=11 PYKB01001441.1 Genbank gene 3638 4351 . + . ID=gene-C9F09_24905;Name=C9F09_24905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24905 PYKB01001441.1 Protein Homology CDS 3638 4351 . + 0 ID=cds-TGC78512.1;Parent=gene-C9F09_24905;Dbxref=NCBI_GP:TGC78512.1;Name=TGC78512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457441.1;locus_tag=C9F09_24905;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=TGC78512.1;transl_table=11 PYKB01001441.1 Genbank gene 4357 6090 . + . ID=gene-C9F09_24910;Name=C9F09_24910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24910 PYKB01001441.1 Protein Homology CDS 4357 6090 . + 0 ID=cds-TGC78513.1;Parent=gene-C9F09_24910;Dbxref=NCBI_GP:TGC78513.1;Name=TGC78513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457440.1;locus_tag=C9F09_24910;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=TGC78513.1;transl_table=11 PYKB01001441.1 Genbank gene 6195 7293 . + . ID=gene-C9F09_24915;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=C9F09_24915 PYKB01001441.1 Protein Homology CDS 6195 6269 . + 0 ID=cds-TGC78514.1;Parent=gene-C9F09_24915;Dbxref=NCBI_GP:TGC78514.1;Name=TGC78514.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;gene=prfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457439.1;locus_tag=C9F09_24915;product=peptide chain release factor 2;protein_id=TGC78514.1;transl_table=11 PYKB01001441.1 Protein Homology CDS 6271 7293 . + 0 ID=cds-TGC78514.1;Parent=gene-C9F09_24915;Dbxref=NCBI_GP:TGC78514.1;Name=TGC78514.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;gene=prfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457439.1;locus_tag=C9F09_24915;product=peptide chain release factor 2;protein_id=TGC78514.1;transl_table=11 PYKB01001441.1 Genbank gene 7303 8820 . + . ID=gene-C9F09_24920;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=C9F09_24920 PYKB01001441.1 Protein Homology CDS 7303 8820 . + 0 ID=cds-TGC78515.1;Parent=gene-C9F09_24920;Dbxref=NCBI_GP:TGC78515.1;Name=TGC78515.1;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=C9F09_24920;product=lysine--tRNA ligase;protein_id=TGC78515.1;transl_table=11 PYKB01001441.1 Genbank gene 8896 9441 . - . ID=gene-C9F09_24925;Name=C9F09_24925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24925 PYKB01001441.1 Protein Homology CDS 8896 9441 . - 0 ID=cds-TGC78516.1;Parent=gene-C9F09_24925;Dbxref=NCBI_GP:TGC78516.1;Name=TGC78516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=C9F09_24925;product=isopentenyl-diphosphate Delta-isomerase;protein_id=TGC78516.1;transl_table=11 PYKB01001441.1 Genbank gene 9706 10464 . + . ID=gene-C9F09_24930;Name=C9F09_24930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24930 PYKB01001441.1 Protein Homology CDS 9706 10464 . + 0 ID=cds-TGC78517.1;Parent=gene-C9F09_24930;Dbxref=NCBI_GP:TGC78517.1;Name=TGC78517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=C9F09_24930;product=endopeptidase;protein_id=TGC78517.1;transl_table=11 PYKB01001441.1 Genbank gene 10544 10617 . + . ID=gene-C9F09_24935;Name=C9F09_24935;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_24935 PYKB01001441.1 tRNAscan-SE tRNA 10544 10617 . + . ID=rna-C9F09_24935;Parent=gene-C9F09_24935;anticodon=(pos:10576..10578);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_24935;product=tRNA-Gly PYKB01001441.1 tRNAscan-SE exon 10544 10617 . + . ID=exon-C9F09_24935-1;Parent=rna-C9F09_24935;anticodon=(pos:10576..10578);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_24935;product=tRNA-Gly PYKB01001441.1 Genbank gene 10710 10922 . - . ID=gene-C9F09_24940;Name=C9F09_24940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24940 PYKB01001441.1 Protein Homology CDS 10710 10922 . - 0 ID=cds-TGC78526.1;Parent=gene-C9F09_24940;Dbxref=NCBI_GP:TGC78526.1;Name=TGC78526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449411.1;locus_tag=C9F09_24940;product=hypothetical protein;protein_id=TGC78526.1;transl_table=11 PYKB01001441.1 Genbank gene 11131 11358 . + . ID=gene-C9F09_24945;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=C9F09_24945 PYKB01001441.1 Protein Homology CDS 11131 11358 . + 0 ID=cds-TGC78518.1;Parent=gene-C9F09_24945;Dbxref=NCBI_GP:TGC78518.1;Name=TGC78518.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457428.1;locus_tag=C9F09_24945;product=antitoxin VapB;protein_id=TGC78518.1;transl_table=11 PYKB01001441.1 Genbank gene 11358 11756 . + . ID=gene-C9F09_24950;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=protein_coding;locus_tag=C9F09_24950 PYKB01001441.1 Protein Homology CDS 11358 11756 . + 0 ID=cds-TGC78519.1;Parent=gene-C9F09_24950;Dbxref=NCBI_GP:TGC78519.1;Name=TGC78519.1;gbkey=CDS;gene=vapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461950.1;locus_tag=C9F09_24950;product=tRNA(fMet)-specific endonuclease VapC;protein_id=TGC78519.1;transl_table=11 PYKB01001441.1 Genbank gene 12329 12514 . + . ID=gene-C9F09_24955;Name=C9F09_24955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24955 PYKB01001441.1 Protein Homology CDS 12329 12514 . + 0 ID=cds-TGC78527.1;Parent=gene-C9F09_24955;Dbxref=NCBI_GP:TGC78527.1;Name=TGC78527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607915.1;locus_tag=C9F09_24955;product=hypothetical protein;protein_id=TGC78527.1;transl_table=11 PYKB01001441.1 Genbank gene 12560 13096 . + . ID=gene-C9F09_24960;Name=C9F09_24960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24960 PYKB01001441.1 Protein Homology CDS 12560 13096 . + 0 ID=cds-TGC78520.1;Parent=gene-C9F09_24960;Dbxref=NCBI_GP:TGC78520.1;Name=TGC78520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457426.1;locus_tag=C9F09_24960;product=porin family protein;protein_id=TGC78520.1;transl_table=11 PYKB01001441.1 Genbank gene 13143 13775 . + . ID=gene-C9F09_24965;Name=C9F09_24965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24965 PYKB01001441.1 Protein Homology CDS 13143 13775 . + 0 ID=cds-TGC78521.1;Parent=gene-C9F09_24965;Dbxref=NCBI_GP:TGC78521.1;Name=TGC78521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=C9F09_24965;product=hypothetical protein;protein_id=TGC78521.1;transl_table=11 PYKB01001441.1 Genbank gene 14368 15081 . + . ID=gene-C9F09_24970;Name=C9F09_24970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24970 PYKB01001441.1 Protein Homology CDS 14368 15081 . + 0 ID=cds-TGC78522.1;Parent=gene-C9F09_24970;Dbxref=NCBI_GP:TGC78522.1;Name=TGC78522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461946.3;locus_tag=C9F09_24970;product=fimbrial protein StdA;protein_id=TGC78522.1;transl_table=11 PYKB01001441.1 Genbank gene 15201 17690 . + . ID=gene-C9F09_24975;Name=C9F09_24975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24975 PYKB01001441.1 Protein Homology CDS 15201 17690 . + 0 ID=cds-TGC78523.1;Parent=gene-C9F09_24975;Dbxref=NCBI_GP:TGC78523.1;Name=TGC78523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=C9F09_24975;product=fimbrial protein;protein_id=TGC78523.1;transl_table=11 PYKB01001441.1 Genbank gene 17731 18474 . + . ID=gene-C9F09_24980;Name=C9F09_24980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24980 PYKB01001441.1 Protein Homology CDS 17731 18474 . + 0 ID=cds-TGC78524.1;Parent=gene-C9F09_24980;Dbxref=NCBI_GP:TGC78524.1;Name=TGC78524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=C9F09_24980;product=fimbrial chaperone protein StdC;protein_id=TGC78524.1;transl_table=11 PYKB01001441.1 Genbank gene 18471 18726 . + . ID=gene-C9F09_24985;Name=C9F09_24985;end_range=18726,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24985;partial=true PYKB01001441.1 Protein Homology CDS 18471 18726 . + 0 ID=cds-TGC78525.1;Parent=gene-C9F09_24985;Dbxref=NCBI_GP:TGC78525.1;Name=TGC78525.1;end_range=18726,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461943.1;locus_tag=C9F09_24985;partial=true;product=hypothetical protein;protein_id=TGC78525.1;transl_table=11 ##sequence-region PYKB01000845.1 1 4049 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000845.1 Genbank region 1 4049 . + . ID=PYKB01000845.1:1..4049;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000845.1 Genbank gene 1 423 . + . ID=gene-C9F09_13445;Name=C9F09_13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13445;partial=true;start_range=.,1 PYKB01000845.1 Protein Homology CDS 1 423 . + 0 ID=cds-TGC91344.1;Parent=gene-C9F09_13445;Dbxref=NCBI_GP:TGC91344.1;Name=TGC91344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=C9F09_13445;partial=true;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=TGC91344.1;start_range=.,1;transl_table=11 PYKB01000845.1 Genbank gene 431 1207 . + . ID=gene-C9F09_13450;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=C9F09_13450 PYKB01000845.1 Protein Homology CDS 431 1207 . + 0 ID=cds-TGC91345.1;Parent=gene-C9F09_13450;Dbxref=NCBI_GP:TGC91345.1;Name=TGC91345.1;gbkey=CDS;gene=argB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=C9F09_13450;product=acetylglutamate kinase;protein_id=TGC91345.1;transl_table=11 PYKB01000845.1 Genbank gene 1325 2701 . + . ID=gene-C9F09_13455;Name=C9F09_13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13455 PYKB01000845.1 Protein Homology CDS 1325 2701 . + 0 ID=cds-TGC91346.1;Parent=gene-C9F09_13455;Dbxref=NCBI_GP:TGC91346.1;Name=TGC91346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=C9F09_13455;product=argininosuccinate lyase;protein_id=TGC91346.1;transl_table=11 PYKB01000845.1 Genbank pseudogene 2815 2907 . + . ID=gene-C9F09_13460;Name=C9F09_13460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13460;pseudo=true PYKB01000845.1 Protein Homology CDS 2815 2907 . + 0 ID=cds-C9F09_13460;Parent=gene-C9F09_13460;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001612276.1;locus_tag=C9F09_13460;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 PYKB01000845.1 Genbank gene 2987 3904 . + . ID=gene-C9F09_13465;Name=C9F09_13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13465 PYKB01000845.1 Protein Homology CDS 2987 3904 . + 0 ID=cds-TGC91347.1;Parent=gene-C9F09_13465;Dbxref=NCBI_GP:TGC91347.1;Name=TGC91347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=C9F09_13465;product=DNA-binding transcriptional regulator OxyR;protein_id=TGC91347.1;transl_table=11 PYKB01000845.1 Genbank gene 3887 4049 . - . ID=gene-C9F09_13470;Name=C9F09_13470;end_range=4049,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13470;partial=true PYKB01000845.1 Protein Homology CDS 3887 4049 . - 1 ID=cds-TGC91348.1;Parent=gene-C9F09_13470;Dbxref=NCBI_GP:TGC91348.1;Name=TGC91348.1;Note=catalyzes the conversion of NADPH to NADH;end_range=4049,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457934.1;locus_tag=C9F09_13470;partial=true;product=NAD(P)(+) transhydrogenase;protein_id=TGC91348.1;transl_table=11 ##sequence-region PYKB01001306.1 1 4039 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001306.1 Genbank region 1 4039 . + . ID=PYKB01001306.1:1..4039;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001306.1 Genbank gene 1 240 . + . ID=gene-C9F09_22335;Name=C9F09_22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22335;partial=true;start_range=.,1 PYKB01001306.1 Protein Homology CDS 1 240 . + 0 ID=cds-TGC81485.1;Parent=gene-C9F09_22335;Dbxref=NCBI_GP:TGC81485.1;Name=TGC81485.1;Note=involved in the transport of effector protein by the type III secretion system of Salmonella pathogenicity island 1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=C9F09_22335;partial=true;product=type III secretion system needle tip protein SipD;protein_id=TGC81485.1;start_range=.,1;transl_table=11 PYKB01001306.1 Genbank gene 259 2316 . + . ID=gene-C9F09_22340;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=C9F09_22340 PYKB01001306.1 Protein Homology CDS 259 2316 . + 0 ID=cds-TGC81486.1;Parent=gene-C9F09_22340;Dbxref=NCBI_GP:TGC81486.1;Name=TGC81486.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=C9F09_22340;product=SPI-1 type III secretion system effector SipA;protein_id=TGC81486.1;transl_table=11 PYKB01001306.1 Genbank gene 2335 2583 . + . ID=gene-C9F09_22345;Name=iacP;gbkey=Gene;gene=iacP;gene_biotype=protein_coding;gene_synonym=sipF;locus_tag=C9F09_22345 PYKB01001306.1 Protein Homology CDS 2335 2583 . + 0 ID=cds-TGC81487.1;Parent=gene-C9F09_22345;Dbxref=NCBI_GP:TGC81487.1;Name=TGC81487.1;Note=invasion-associated ACP%3B carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;gene=iacP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457275.1;locus_tag=C9F09_22345;product=acyl carrier protein;protein_id=TGC81487.1;transl_table=11 PYKB01001306.1 Genbank gene 2627 2887 . + . ID=gene-C9F09_22350;Name=C9F09_22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22350 PYKB01001306.1 Protein Homology CDS 2627 2887 . + 0 ID=cds-TGC81488.1;Parent=gene-C9F09_22350;Dbxref=NCBI_GP:TGC81488.1;Name=TGC81488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457274.1;locus_tag=C9F09_22350;product=hypothetical protein;protein_id=TGC81488.1;transl_table=11 PYKB01001306.1 Genbank gene 2914 3306 . + . ID=gene-C9F09_22355;Name=C9F09_22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22355 PYKB01001306.1 Protein Homology CDS 2914 3306 . + 0 ID=cds-TGC81489.1;Parent=gene-C9F09_22355;Dbxref=NCBI_GP:TGC81489.1;Name=TGC81489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=C9F09_22355;product=chaperone SicP;protein_id=TGC81489.1;transl_table=11 PYKB01001306.1 Genbank gene 3293 4039 . + . ID=gene-C9F09_22360;Name=sptP;end_range=4039,.;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=C9F09_22360;partial=true PYKB01001306.1 Protein Homology CDS 3293 4039 . + 0 ID=cds-TGC81490.1;Parent=gene-C9F09_22360;Dbxref=NCBI_GP:TGC81490.1;Name=TGC81490.1;end_range=4039,.;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=C9F09_22360;partial=true;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=TGC81490.1;transl_table=11 ##sequence-region PYKB01001695.1 1 4031 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001695.1 Genbank region 1 4031 . + . ID=PYKB01001695.1:1..4031;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001695.1 Genbank gene 1 610 . - . ID=gene-C9F09_29610;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=C9F09_29610;partial=true;start_range=.,1 PYKB01001695.1 Protein Homology CDS 1 610 . - 0 ID=cds-TGC72252.1;Parent=gene-C9F09_29610;Dbxref=NCBI_GP:TGC72252.1;Name=TGC72252.1;Note=periplasmic enzyme%3B post-translationally processed into two subunits which are required for wild-type enzyme activity%3B cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptides;gbkey=CDS;gene=ggt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=C9F09_29610;partial=true;product=gamma-glutamyltransferase;protein_id=TGC72252.1;start_range=.,1;transl_table=11 PYKB01001695.1 Genbank gene 736 1152 . + . ID=gene-C9F09_29615;Name=C9F09_29615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29615 PYKB01001695.1 Protein Homology CDS 736 1152 . + 0 ID=cds-TGC72248.1;Parent=gene-C9F09_29615;Dbxref=NCBI_GP:TGC72248.1;Name=TGC72248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=C9F09_29615;product=hypothetical protein;protein_id=TGC72248.1;transl_table=11 PYKB01001695.1 Genbank gene 1165 1905 . - . ID=gene-C9F09_29620;Name=C9F09_29620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29620 PYKB01001695.1 Protein Homology CDS 1165 1905 . - 0 ID=cds-TGC72249.1;Parent=gene-C9F09_29620;Dbxref=NCBI_GP:TGC72249.1;Name=TGC72249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=C9F09_29620;product=glycerophosphodiester phosphodiesterase;protein_id=TGC72249.1;transl_table=11 PYKB01001695.1 Genbank pseudogene 1902 2972 . - . ID=gene-C9F09_29625;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=pseudogene;locus_tag=C9F09_29625;pseudo=true PYKB01001695.1 Protein Homology CDS 1902 2972 . - 0 ID=cds-C9F09_29625;Parent=gene-C9F09_29625;Note=part of the UgpABCE glycerol-3-phosphate uptake system%3B internal stop;gbkey=CDS;gene=ugpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=C9F09_29625;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;pseudo=true;transl_table=11 PYKB01001695.1 Genbank gene 2974 3819 . - . ID=gene-C9F09_29630;Name=C9F09_29630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29630 PYKB01001695.1 Protein Homology CDS 2974 3819 . - 0 ID=cds-TGC72250.1;Parent=gene-C9F09_29630;Dbxref=NCBI_GP:TGC72250.1;Name=TGC72250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=C9F09_29630;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=TGC72250.1;transl_table=11 PYKB01001695.1 Genbank gene 3816 4031 . - . ID=gene-C9F09_29635;Name=C9F09_29635;end_range=4031,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29635;partial=true PYKB01001695.1 Protein Homology CDS 3816 4031 . - 0 ID=cds-TGC72251.1;Parent=gene-C9F09_29635;Dbxref=NCBI_GP:TGC72251.1;Name=TGC72251.1;Note=with UgpEC is involved in the uptake of glycerol-3-phosphate;end_range=4031,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=C9F09_29635;partial=true;product=glycerol-3-phosphate transporter permease;protein_id=TGC72251.1;transl_table=11 ##sequence-region PYKB01000960.1 1 4025 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000960.1 Genbank region 1 4025 . + . ID=PYKB01000960.1:1..4025;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000960.1 Genbank gene 1 593 . - . ID=gene-C9F09_15895;Name=C9F09_15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15895;partial=true;start_range=.,1 PYKB01000960.1 Protein Homology CDS 1 593 . - 0 ID=cds-TGC89101.1;Parent=gene-C9F09_15895;Dbxref=NCBI_GP:TGC89101.1;Name=TGC89101.1;Note=involved in the transport of nitrate and nitrite;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=C9F09_15895;partial=true;product=nitrate/nitrite transporter;protein_id=TGC89101.1;start_range=.,1;transl_table=11 PYKB01000960.1 Genbank gene 808 1386 . - . ID=gene-C9F09_15900;Name=C9F09_15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15900 PYKB01000960.1 Protein Homology CDS 808 1386 . - 0 ID=cds-TGC89098.1;Parent=gene-C9F09_15900;Dbxref=NCBI_GP:TGC89098.1;Name=TGC89098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003833036.1;locus_tag=C9F09_15900;product=TetR family transcriptional regulator;protein_id=TGC89098.1;transl_table=11 PYKB01000960.1 Genbank gene 1504 2991 . + . ID=gene-C9F09_15905;Name=C9F09_15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15905 PYKB01000960.1 Protein Homology CDS 1504 2991 . + 0 ID=cds-TGC89099.1;Parent=gene-C9F09_15905;Dbxref=NCBI_GP:TGC89099.1;Name=TGC89099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455922.1;locus_tag=C9F09_15905;product=methyl viologen resistance protein SmvA;protein_id=TGC89099.1;transl_table=11 PYKB01000960.1 Genbank gene 3016 3396 . - . ID=gene-C9F09_15910;Name=C9F09_15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15910 PYKB01000960.1 Protein Homology CDS 3016 3396 . - 0 ID=cds-TGC89102.1;Parent=gene-C9F09_15910;Dbxref=NCBI_GP:TGC89102.1;Name=TGC89102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=C9F09_15910;product=GFA family protein;protein_id=TGC89102.1;transl_table=11 PYKB01000960.1 Genbank gene 3540 4025 . - . ID=gene-C9F09_15915;Name=ompD;end_range=4025,.;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=C9F09_15915;partial=true PYKB01000960.1 Protein Homology CDS 3540 4025 . - 0 ID=cds-TGC89100.1;Parent=gene-C9F09_15915;Dbxref=NCBI_GP:TGC89100.1;Name=TGC89100.1;end_range=4025,.;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=C9F09_15915;partial=true;product=porin OmpD;protein_id=TGC89100.1;transl_table=11 ##sequence-region PYKB01000569.1 1 3983 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000569.1 Genbank region 1 3983 . + . ID=PYKB01000569.1:1..3983;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000569.1 Genbank gene 1 1221 . + . ID=gene-C9F09_08015;Name=C9F09_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08015;partial=true;start_range=.,1 PYKB01000569.1 Protein Homology CDS 1 1221 . + 0 ID=cds-TGC96059.1;Parent=gene-C9F09_08015;Dbxref=NCBI_GP:TGC96059.1;Name=TGC96059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460866.1;locus_tag=C9F09_08015;partial=true;product=arginine--tRNA ligase;protein_id=TGC96059.1;start_range=.,1;transl_table=11 PYKB01000569.1 Genbank gene 1410 3281 . + . ID=gene-C9F09_08020;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=C9F09_08020 PYKB01000569.1 Protein Homology CDS 1410 3281 . + 0 ID=cds-TGC96060.1;Parent=gene-C9F09_08020;Dbxref=NCBI_GP:TGC96060.1;Name=TGC96060.1;gbkey=CDS;gene=mrdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=C9F09_08020;product=penicillin-binding protein 2;protein_id=TGC96060.1;transl_table=11 PYKB01000569.1 Genbank gene 3335 3983 . - . ID=gene-C9F09_08025;Name=C9F09_08025;end_range=3983,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08025;partial=true PYKB01000569.1 Protein Homology CDS 3335 3983 . - 1 ID=cds-TGC96061.1;Parent=gene-C9F09_08025;Dbxref=NCBI_GP:TGC96061.1;Name=TGC96061.1;end_range=3983,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=C9F09_08025;partial=true;product=glycoside hydrolase 105 family protein;protein_id=TGC96061.1;transl_table=11 ##sequence-region PYKB01001134.1 1 3969 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001134.1 Genbank region 1 3969 . + . ID=PYKB01001134.1:1..3969;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001134.1 Genbank gene 1 1131 . - . ID=gene-C9F09_19155;Name=C9F09_19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19155;partial=true;start_range=.,1 PYKB01001134.1 Protein Homology CDS 1 1131 . - 0 ID=cds-TGC85113.1;Parent=gene-C9F09_19155;Dbxref=NCBI_GP:TGC85113.1;Name=TGC85113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=C9F09_19155;partial=true;product=isovaleryl-CoA dehydrogenase;protein_id=TGC85113.1;start_range=.,1;transl_table=11 PYKB01001134.1 Genbank gene 1216 2379 . - . ID=gene-C9F09_19160;Name=C9F09_19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19160 PYKB01001134.1 Protein Homology CDS 1216 2379 . - 0 ID=cds-TGC85109.1;Parent=gene-C9F09_19160;Dbxref=NCBI_GP:TGC85109.1;Name=TGC85109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=C9F09_19160;product=hypothetical protein;protein_id=TGC85109.1;transl_table=11 PYKB01001134.1 Genbank gene 2382 3020 . - . ID=gene-C9F09_19165;Name=C9F09_19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19165 PYKB01001134.1 Protein Homology CDS 2382 3020 . - 0 ID=cds-TGC85110.1;Parent=gene-C9F09_19165;Dbxref=NCBI_GP:TGC85110.1;Name=TGC85110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=C9F09_19165;product=hypothetical protein;protein_id=TGC85110.1;transl_table=11 PYKB01001134.1 Genbank gene 3030 3428 . - . ID=gene-C9F09_19170;Name=C9F09_19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19170 PYKB01001134.1 Protein Homology CDS 3030 3428 . - 0 ID=cds-TGC85111.1;Parent=gene-C9F09_19170;Dbxref=NCBI_GP:TGC85111.1;Name=TGC85111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=C9F09_19170;product=hypothetical protein;protein_id=TGC85111.1;transl_table=11 PYKB01001134.1 Genbank gene 3446 3969 . - . ID=gene-C9F09_19175;Name=C9F09_19175;end_range=3969,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19175;partial=true PYKB01001134.1 Protein Homology CDS 3446 3969 . - 2 ID=cds-TGC85112.1;Parent=gene-C9F09_19175;Dbxref=NCBI_GP:TGC85112.1;Name=TGC85112.1;end_range=3969,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458807.1;locus_tag=C9F09_19175;partial=true;product=DUF2491 domain-containing protein;protein_id=TGC85112.1;transl_table=11 ##sequence-region PYKB01000959.1 1 3967 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000959.1 Genbank region 1 3967 . + . ID=PYKB01000959.1:1..3967;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000959.1 Genbank gene 1 1032 . - . ID=gene-C9F09_15870;Name=C9F09_15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15870;partial=true;start_range=.,1 PYKB01000959.1 Protein Homology CDS 1 1032 . - 0 ID=cds-TGC89130.1;Parent=gene-C9F09_15870;Dbxref=NCBI_GP:TGC89130.1;Name=TGC89130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016247187.1;locus_tag=C9F09_15870;partial=true;product=formate dehydrogenase;protein_id=TGC89130.1;start_range=.,1;transl_table=11 PYKB01000959.1 Genbank gene 1081 1668 . - . ID=gene-C9F09_15875;Name=C9F09_15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15875 PYKB01000959.1 Protein Homology CDS 1081 1668 . - 0 ID=cds-TGC89131.1;Parent=gene-C9F09_15875;Dbxref=NCBI_GP:TGC89131.1;Name=TGC89131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004594160.1;locus_tag=C9F09_15875;product=sulfate ABC transporter substrate-binding protein;protein_id=TGC89131.1;transl_table=11 PYKB01000959.1 Genbank gene 1946 2827 . + . ID=gene-C9F09_15880;Name=C9F09_15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15880 PYKB01000959.1 Protein Homology CDS 1946 2827 . + 0 ID=cds-TGC89132.1;Parent=gene-C9F09_15880;Dbxref=NCBI_GP:TGC89132.1;Name=TGC89132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441340.1;locus_tag=C9F09_15880;product=EamA family transporter;protein_id=TGC89132.1;transl_table=11 PYKB01000959.1 Genbank gene 3087 3269 . - . ID=gene-C9F09_15885;Name=C9F09_15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15885 PYKB01000959.1 Protein Homology CDS 3087 3269 . - 0 ID=cds-TGC89133.1;Parent=gene-C9F09_15885;Dbxref=NCBI_GP:TGC89133.1;Name=TGC89133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218804.1;locus_tag=C9F09_15885;product=hypothetical protein;protein_id=TGC89133.1;transl_table=11 PYKB01000959.1 Genbank gene 3352 3967 . + . ID=gene-C9F09_15890;Name=ompD;end_range=3967,.;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=C9F09_15890;partial=true PYKB01000959.1 Protein Homology CDS 3352 3967 . + 0 ID=cds-TGC89134.1;Parent=gene-C9F09_15890;Dbxref=NCBI_GP:TGC89134.1;Name=TGC89134.1;end_range=3967,.;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=C9F09_15890;partial=true;product=porin OmpD;protein_id=TGC89134.1;transl_table=11 ##sequence-region PYKB01000805.1 1 3962 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000805.1 Genbank region 1 3962 . + . ID=PYKB01000805.1:1..3962;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000805.1 Genbank gene 455 1066 . - . ID=gene-C9F09_12560;Name=C9F09_12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12560 PYKB01000805.1 GeneMarkS+ CDS 455 1066 . - 0 ID=cds-TGC92069.1;Parent=gene-C9F09_12560;Dbxref=NCBI_GP:TGC92069.1;Name=TGC92069.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_12560;product=hypothetical protein;protein_id=TGC92069.1;transl_table=11 PYKB01000805.1 Genbank gene 1060 3852 . - . ID=gene-C9F09_12565;Name=C9F09_12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12565 PYKB01000805.1 Protein Homology CDS 1060 3852 . - 0 ID=cds-TGC92070.1;Parent=gene-C9F09_12565;Dbxref=NCBI_GP:TGC92070.1;Name=TGC92070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454901.1;locus_tag=C9F09_12565;product=type IV secretion protein Rhs;protein_id=TGC92070.1;transl_table=11 ##sequence-region PYKB01001067.1 1 3956 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001067.1 Genbank region 1 3956 . + . ID=PYKB01001067.1:1..3956;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001067.1 Genbank gene 1 300 . + . ID=gene-C9F09_17855;Name=C9F09_17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17855;partial=true;start_range=.,1 PYKB01001067.1 Protein Homology CDS 1 300 . + 0 ID=cds-TGC86779.1;Parent=gene-C9F09_17855;Dbxref=NCBI_GP:TGC86779.1;Name=TGC86779.1;Note=multicopy suppressor of dominant negative ftsH mutations%3B putative acyl-CoA synthetase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455121.1;locus_tag=C9F09_17855;partial=true;product=acyl-CoA synthetase FdrA;protein_id=TGC86779.1;start_range=.,1;transl_table=11 PYKB01001067.1 Genbank gene 310 1569 . + . ID=gene-C9F09_17860;Name=C9F09_17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17860 PYKB01001067.1 Protein Homology CDS 310 1569 . + 0 ID=cds-TGC86780.1;Parent=gene-C9F09_17860;Dbxref=NCBI_GP:TGC86780.1;Name=TGC86780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=C9F09_17860;product=hypothetical protein;protein_id=TGC86780.1;transl_table=11 PYKB01001067.1 Genbank gene 1581 2390 . + . ID=gene-C9F09_17865;Name=C9F09_17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17865 PYKB01001067.1 Protein Homology CDS 1581 2390 . + 0 ID=cds-TGC86781.1;Parent=gene-C9F09_17865;Dbxref=NCBI_GP:TGC86781.1;Name=TGC86781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=C9F09_17865;product=carboxylase;protein_id=TGC86781.1;transl_table=11 PYKB01001067.1 Genbank gene 2394 3287 . + . ID=gene-C9F09_17870;Name=C9F09_17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17870 PYKB01001067.1 Protein Homology CDS 2394 3287 . + 0 ID=cds-TGC86782.1;Parent=gene-C9F09_17870;Dbxref=NCBI_GP:TGC86782.1;Name=TGC86782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=C9F09_17870;product=carbamate kinase;protein_id=TGC86782.1;transl_table=11 PYKB01001067.1 Genbank pseudogene 3328 3801 . - . ID=gene-C9F09_17875;Name=C9F09_17875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17875;pseudo=true PYKB01001067.1 Protein Homology CDS 3328 3801 . - 0 ID=cds-C9F09_17875;Parent=gene-C9F09_17875;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455125.1;locus_tag=C9F09_17875;product=5-(carboxyamino)imidazole ribonucleotide synthase;pseudo=true;transl_table=11 ##sequence-region PYKB01000814.1 1 3948 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000814.1 Genbank region 1 3948 . + . ID=PYKB01000814.1:1..3948;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000814.1 Genbank gene 1 309 . + . ID=gene-C9F09_12695;Name=C9F09_12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12695;partial=true;start_range=.,1 PYKB01000814.1 Protein Homology CDS 1 309 . + 0 ID=cds-TGC91975.1;Parent=gene-C9F09_12695;Dbxref=NCBI_GP:TGC91975.1;Name=TGC91975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457531.1;locus_tag=C9F09_12695;partial=true;product=fructuronate reductase;protein_id=TGC91975.1;start_range=.,1;transl_table=11 PYKB01000814.1 Genbank gene 321 1733 . + . ID=gene-C9F09_12700;Name=C9F09_12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12700 PYKB01000814.1 Protein Homology CDS 321 1733 . + 0 ID=cds-TGC91976.1;Parent=gene-C9F09_12700;Dbxref=NCBI_GP:TGC91976.1;Name=TGC91976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=C9F09_12700;product=glucuronate isomerase;protein_id=TGC91976.1;transl_table=11 PYKB01000814.1 Genbank gene 2033 3091 . - . ID=gene-C9F09_12705;Name=C9F09_12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12705 PYKB01000814.1 Protein Homology CDS 2033 3091 . - 0 ID=cds-TGC91977.1;Parent=gene-C9F09_12705;Dbxref=NCBI_GP:TGC91977.1;Name=TGC91977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457533.1;locus_tag=C9F09_12705;product=chemotaxis protein;protein_id=TGC91977.1;transl_table=11 PYKB01000814.1 Genbank gene 3453 3650 . + . ID=gene-C9F09_12710;Name=C9F09_12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12710 PYKB01000814.1 Protein Homology CDS 3453 3650 . + 0 ID=cds-TGC91978.1;Parent=gene-C9F09_12710;Dbxref=NCBI_GP:TGC91978.1;Name=TGC91978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574970.1;locus_tag=C9F09_12710;product=hypothetical protein;protein_id=TGC91978.1;transl_table=11 PYKB01000814.1 Genbank gene 3761 3948 . - . ID=gene-C9F09_12715;Name=C9F09_12715;end_range=3948,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12715;partial=true PYKB01000814.1 Protein Homology CDS 3761 3948 . - 2 ID=cds-TGC91979.1;Parent=gene-C9F09_12715;Dbxref=NCBI_GP:TGC91979.1;Name=TGC91979.1;end_range=3948,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457534.1;locus_tag=C9F09_12715;partial=true;product=hypothetical protein;protein_id=TGC91979.1;transl_table=11 ##sequence-region PYKB01000889.1 1 11537 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000889.1 Genbank region 1 11537 . + . ID=PYKB01000889.1:1..11537;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000889.1 Genbank pseudogene 1 1012 . - . ID=gene-C9F09_14520;Name=C9F09_14520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_14520;pseudo=true PYKB01000889.1 Protein Homology CDS 1 1012 . - 0 ID=cds-C9F09_14520;Parent=gene-C9F09_14520;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=C9F09_14520;product=cytochrome d terminal oxidase subunit 1;pseudo=true;transl_table=11 PYKB01000889.1 Genbank gene 1087 1935 . - . ID=gene-C9F09_14525;Name=C9F09_14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14525 PYKB01000889.1 Protein Homology CDS 1087 1935 . - 0 ID=cds-TGC90422.1;Parent=gene-C9F09_14525;Dbxref=NCBI_GP:TGC90422.1;Name=TGC90422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456300.1;locus_tag=C9F09_14525;product=hydrogenase expression/formation protein;protein_id=TGC90422.1;transl_table=11 PYKB01000889.1 Genbank gene 1932 2336 . - . ID=gene-C9F09_14530;Name=C9F09_14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14530 PYKB01000889.1 Protein Homology CDS 1932 2336 . - 0 ID=cds-TGC90423.1;Parent=gene-C9F09_14530;Dbxref=NCBI_GP:TGC90423.1;Name=TGC90423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456299.1;locus_tag=C9F09_14530;product=hydrogenase-1 operon protein HyaE;protein_id=TGC90423.1;transl_table=11 PYKB01000889.1 Genbank gene 2326 2922 . - . ID=gene-C9F09_14535;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=C9F09_14535 PYKB01000889.1 Protein Homology CDS 2326 2922 . - 0 ID=cds-TGC90424.1;Parent=gene-C9F09_14535;Dbxref=NCBI_GP:TGC90424.1;Name=TGC90424.1;gbkey=CDS;gene=hybD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456298.1;locus_tag=C9F09_14535;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=TGC90424.1;transl_table=11 PYKB01000889.1 Genbank gene 2919 3650 . - . ID=gene-C9F09_14540;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=C9F09_14540 PYKB01000889.1 Protein Homology CDS 2919 3650 . - 0 ID=cds-TGC90425.1;Parent=gene-C9F09_14540;Dbxref=NCBI_GP:TGC90425.1;Name=TGC90425.1;gbkey=CDS;gene=cybH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=C9F09_14540;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=TGC90425.1;transl_table=11 PYKB01000889.1 Genbank gene 3669 5462 . - . ID=gene-C9F09_14545;Name=C9F09_14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14545 PYKB01000889.1 Protein Homology CDS 3669 5462 . - 0 ID=cds-TGC90426.1;Parent=gene-C9F09_14545;Dbxref=NCBI_GP:TGC90426.1;Name=TGC90426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456296.1;locus_tag=C9F09_14545;product=hydrogenase 2 large subunit;protein_id=TGC90426.1;transl_table=11 PYKB01000889.1 Genbank gene 5459 6577 . - . ID=gene-C9F09_14550;Name=C9F09_14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14550 PYKB01000889.1 Protein Homology CDS 5459 6577 . - 0 ID=cds-TGC90430.1;Parent=gene-C9F09_14550;Dbxref=NCBI_GP:TGC90430.1;Name=TGC90430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=C9F09_14550;product=[Ni/Fe] hydrogenase small subunit;protein_id=TGC90430.1;transl_table=11 PYKB01000889.1 Genbank gene 7072 8337 . + . ID=gene-C9F09_14555;Name=C9F09_14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14555 PYKB01000889.1 Protein Homology CDS 7072 8337 . + 0 ID=cds-TGC90427.1;Parent=gene-C9F09_14555;Dbxref=NCBI_GP:TGC90427.1;Name=TGC90427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460741.1;locus_tag=C9F09_14555;product=cytoplasmic protein;protein_id=TGC90427.1;transl_table=11 PYKB01000889.1 Genbank pseudogene 8529 8748 . + . ID=gene-C9F09_14560;Name=C9F09_14560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_14560;pseudo=true PYKB01000889.1 Protein Homology CDS 8529 8748 . + 0 ID=cds-C9F09_14560;Parent=gene-C9F09_14560;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344272.1;locus_tag=C9F09_14560;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000889.1 Genbank gene 8821 9276 . - . ID=gene-C9F09_14565;Name=C9F09_14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14565 PYKB01000889.1 Protein Homology CDS 8821 9276 . - 0 ID=cds-TGC90428.1;Parent=gene-C9F09_14565;Dbxref=NCBI_GP:TGC90428.1;Name=TGC90428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487332.1;locus_tag=C9F09_14565;product=hypothetical protein;protein_id=TGC90428.1;transl_table=11 PYKB01000889.1 Genbank gene 9315 9974 . - . ID=gene-C9F09_14570;Name=C9F09_14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14570 PYKB01000889.1 Protein Homology CDS 9315 9974 . - 0 ID=cds-TGC90431.1;Parent=gene-C9F09_14570;Dbxref=NCBI_GP:TGC90431.1;Name=TGC90431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664562.1;locus_tag=C9F09_14570;product=hypothetical protein;protein_id=TGC90431.1;transl_table=11 PYKB01000889.1 Genbank gene 10692 11537 . - . ID=gene-C9F09_14575;Name=C9F09_14575;end_range=11537,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14575;partial=true PYKB01000889.1 Protein Homology CDS 10692 11537 . - 0 ID=cds-TGC90429.1;Parent=gene-C9F09_14575;Dbxref=NCBI_GP:TGC90429.1;Name=TGC90429.1;end_range=11537,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=C9F09_14575;partial=true;product=redox-regulated ATPase YchF;protein_id=TGC90429.1;transl_table=11 ##sequence-region PYKB01001556.1 1 3924 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001556.1 Genbank region 1 3924 . + . ID=PYKB01001556.1:1..3924;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001556.1 Genbank gene 1 311 . - . ID=gene-C9F09_27170;Name=C9F09_27170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27170;partial=true;start_range=.,1 PYKB01001556.1 Protein Homology CDS 1 311 . - 0 ID=cds-TGC75905.1;Parent=gene-C9F09_27170;Dbxref=NCBI_GP:TGC75905.1;Name=TGC75905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457840.1;locus_tag=C9F09_27170;partial=true;product=HTH-type transcriptional activator IlvY;protein_id=TGC75905.1;start_range=.,1;transl_table=11 PYKB01001556.1 Genbank gene 476 1951 . + . ID=gene-C9F09_27175;Name=C9F09_27175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27175 PYKB01001556.1 Protein Homology CDS 476 1951 . + 0 ID=cds-TGC75901.1;Parent=gene-C9F09_27175;Dbxref=NCBI_GP:TGC75901.1;Name=TGC75901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=C9F09_27175;product=ketol-acid reductoisomerase;protein_id=TGC75901.1;transl_table=11 PYKB01001556.1 Genbank gene 2043 2324 . - . ID=gene-C9F09_27180;Name=C9F09_27180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27180 PYKB01001556.1 Protein Homology CDS 2043 2324 . - 0 ID=cds-TGC75902.1;Parent=gene-C9F09_27180;Dbxref=NCBI_GP:TGC75902.1;Name=TGC75902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457838.1;locus_tag=C9F09_27180;product=peptidyl-prolyl cis-trans isomerase;protein_id=TGC75902.1;transl_table=11 PYKB01001556.1 Genbank gene 2428 2676 . + . ID=gene-C9F09_27185;Name=C9F09_27185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27185 PYKB01001556.1 Protein Homology CDS 2428 2676 . + 0 ID=cds-TGC75903.1;Parent=gene-C9F09_27185;Dbxref=NCBI_GP:TGC75903.1;Name=TGC75903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675061.1;locus_tag=C9F09_27185;product=cyclic nucleotide-binding protein;protein_id=TGC75903.1;transl_table=11 PYKB01001556.1 Genbank gene 2613 2762 . + . ID=gene-C9F09_27190;Name=C9F09_27190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27190 PYKB01001556.1 Protein Homology CDS 2613 2762 . + 0 ID=cds-TGC75904.1;Parent=gene-C9F09_27190;Dbxref=NCBI_GP:TGC75904.1;Name=TGC75904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462802.1;locus_tag=C9F09_27190;product=hypothetical protein;protein_id=TGC75904.1;transl_table=11 PYKB01001556.1 Genbank pseudogene 2862 3896 . + . ID=gene-C9F09_27195;Name=C9F09_27195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_27195;pseudo=true PYKB01001556.1 Protein Homology CDS 2862 3896 . + 0 ID=cds-C9F09_27195;Parent=gene-C9F09_27195;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457834.1;locus_tag=C9F09_27195;product=ATP-dependent DNA helicase Rep;pseudo=true;transl_table=11 ##sequence-region PYKB01000968.1 1 3922 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000968.1 Genbank region 1 3922 . + . ID=PYKB01000968.1:1..3922;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000968.1 Genbank gene 1 1685 . - . ID=gene-C9F09_16020;Name=C9F09_16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16020;partial=true;start_range=.,1 PYKB01000968.1 Protein Homology CDS 1 1685 . - 0 ID=cds-TGC88952.1;Parent=gene-C9F09_16020;Dbxref=NCBI_GP:TGC88952.1;Name=TGC88952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257593.1;locus_tag=C9F09_16020;partial=true;product=restriction endonuclease;protein_id=TGC88952.1;start_range=.,1;transl_table=11 PYKB01000968.1 Genbank gene 1685 3154 . - . ID=gene-C9F09_16025;Name=C9F09_16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16025 PYKB01000968.1 Protein Homology CDS 1685 3154 . - 0 ID=cds-TGC88953.1;Parent=gene-C9F09_16025;Dbxref=NCBI_GP:TGC88953.1;Name=TGC88953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028345.1;locus_tag=C9F09_16025;product=restriction endonuclease subunit M;protein_id=TGC88953.1;transl_table=11 PYKB01000968.1 Genbank pseudogene 3225 3833 . - . ID=gene-C9F09_16030;Name=C9F09_16030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16030;pseudo=true PYKB01000968.1 Protein Homology CDS 3225 3833 . - 0 ID=cds-C9F09_16030;Parent=gene-C9F09_16030;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313335.1;locus_tag=C9F09_16030;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11 ##sequence-region PYKB01001054.1 1 3909 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001054.1 Genbank region 1 3909 . + . ID=PYKB01001054.1:1..3909;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001054.1 Genbank pseudogene 253 1476 . + . ID=gene-C9F09_17690;Name=C9F09_17690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17690;pseudo=true PYKB01001054.1 Protein Homology CDS 253 1476 . + 0 ID=cds-C9F09_17690;Parent=gene-C9F09_17690;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455329.1;locus_tag=C9F09_17690;product=imidazolonepropionase;pseudo=true;transl_table=11 PYKB01001054.1 Genbank gene 1473 2414 . + . ID=gene-C9F09_17695;Name=C9F09_17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17695 PYKB01001054.1 Protein Homology CDS 1473 2414 . + 0 ID=cds-TGC87045.1;Parent=gene-C9F09_17695;Dbxref=NCBI_GP:TGC87045.1;Name=TGC87045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=C9F09_17695;product=formimidoylglutamase;protein_id=TGC87045.1;transl_table=11 PYKB01001054.1 Genbank gene 2459 3184 . + . ID=gene-C9F09_17700;Name=C9F09_17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17700 PYKB01001054.1 Protein Homology CDS 2459 3184 . + 0 ID=cds-TGC87046.1;Parent=gene-C9F09_17700;Dbxref=NCBI_GP:TGC87046.1;Name=TGC87046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455331.1;locus_tag=C9F09_17700;product=histidine utilization repressor;protein_id=TGC87046.1;transl_table=11 PYKB01001054.1 Genbank pseudogene 3381 3827 . + . ID=gene-C9F09_17705;Name=C9F09_17705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17705;pseudo=true PYKB01001054.1 Protein Homology CDS 3381 3827 . + 0 ID=cds-C9F09_17705;Parent=gene-C9F09_17705;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455332.1;locus_tag=C9F09_17705;product=urocanate hydratase;pseudo=true;transl_table=11 ##sequence-region PYKB01000938.1 1 3878 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000938.1 Genbank region 1 3878 . + . ID=PYKB01000938.1:1..3878;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000938.1 Genbank gene 1 724 . + . ID=gene-C9F09_15485;Name=C9F09_15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15485;partial=true;start_range=.,1 PYKB01000938.1 Protein Homology CDS 1 724 . + 1 ID=cds-TGC89588.1;Parent=gene-C9F09_15485;Dbxref=NCBI_GP:TGC89588.1;Name=TGC89588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=C9F09_15485;partial=true;product=MFS transporter;protein_id=TGC89588.1;start_range=.,1;transl_table=11 PYKB01000938.1 Genbank gene 735 1778 . + . ID=gene-C9F09_15490;Name=C9F09_15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15490 PYKB01000938.1 Protein Homology CDS 735 1778 . + 0 ID=cds-TGC89589.1;Parent=gene-C9F09_15490;Dbxref=NCBI_GP:TGC89589.1;Name=TGC89589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=C9F09_15490;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=TGC89589.1;transl_table=11 PYKB01000938.1 Genbank gene 1800 2636 . + . ID=gene-C9F09_15495;Name=C9F09_15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15495 PYKB01000938.1 Protein Homology CDS 1800 2636 . + 0 ID=cds-TGC89590.1;Parent=gene-C9F09_15495;Dbxref=NCBI_GP:TGC89590.1;Name=TGC89590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=C9F09_15495;product=ketose-bisphosphate aldolase;protein_id=TGC89590.1;transl_table=11 PYKB01000938.1 Genbank gene 2641 3588 . + . ID=gene-C9F09_15500;Name=C9F09_15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15500 PYKB01000938.1 Protein Homology CDS 2641 3588 . + 0 ID=cds-TGC89591.1;Parent=gene-C9F09_15500;Dbxref=NCBI_GP:TGC89591.1;Name=TGC89591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002412789.1;locus_tag=C9F09_15500;product=sugar kinase;protein_id=TGC89591.1;transl_table=11 PYKB01000938.1 Genbank pseudogene 3598 3840 . + . ID=gene-C9F09_15505;Name=C9F09_15505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15505;pseudo=true PYKB01000938.1 Protein Homology CDS 3598 3840 . + 0 ID=cds-C9F09_15505;Parent=gene-C9F09_15505;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160741.1;locus_tag=C9F09_15505;product=aldo/keto reductase;pseudo=true;transl_table=11 ##sequence-region PYKB01001560.1 1 3901 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001560.1 Genbank region 1 3901 . + . ID=PYKB01001560.1:1..3901;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001560.1 Genbank gene 1 315 . + . ID=gene-C9F09_27240;Name=C9F09_27240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27240;partial=true;start_range=.,1 PYKB01001560.1 Protein Homology CDS 1 315 . + 0 ID=cds-TGC75833.1;Parent=gene-C9F09_27240;Dbxref=NCBI_GP:TGC75833.1;Name=TGC75833.1;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457953.1;locus_tag=C9F09_27240;partial=true;product=cystathionine gamma-synthase;protein_id=TGC75833.1;start_range=.,1;transl_table=11 PYKB01001560.1 Genbank gene 318 2750 . + . ID=gene-C9F09_27245;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;gene_synonym=metM;locus_tag=C9F09_27245 PYKB01001560.1 Protein Homology CDS 318 2750 . + 0 ID=cds-TGC75834.1;Parent=gene-C9F09_27245;Dbxref=NCBI_GP:TGC75834.1;Name=TGC75834.1;Note=multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=C9F09_27245;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=TGC75834.1;transl_table=11 PYKB01001560.1 Genbank gene 2866 3723 . - . ID=gene-C9F09_27250;Name=C9F09_27250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27250 PYKB01001560.1 Protein Homology CDS 2866 3723 . - 0 ID=cds-TGC75835.1;Parent=gene-C9F09_27250;Dbxref=NCBI_GP:TGC75835.1;Name=TGC75835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=C9F09_27250;product=mechanosensitive ion channel protein MscS;protein_id=TGC75835.1;transl_table=11 ##sequence-region PYKB01000115.1 1 3884 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000115.1 Genbank region 1 3884 . + . ID=PYKB01000115.1:1..3884;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000115.1 Genbank gene 1 653 . - . ID=gene-C9F09_01290;Name=C9F09_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01290;partial=true;start_range=.,1 PYKB01000115.1 Protein Homology CDS 1 653 . - 0 ID=cds-TGD05178.1;Parent=gene-C9F09_01290;Dbxref=NCBI_GP:TGD05178.1;Name=TGD05178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=C9F09_01290;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGD05178.1;start_range=.,1;transl_table=11 PYKB01000115.1 Genbank gene 762 1424 . + . ID=gene-C9F09_01295;Name=C9F09_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01295 PYKB01000115.1 Protein Homology CDS 762 1424 . + 0 ID=cds-TGD05179.1;Parent=gene-C9F09_01295;Dbxref=NCBI_GP:TGD05179.1;Name=TGD05179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=C9F09_01295;product=carbonate dehydratase;protein_id=TGD05179.1;transl_table=11 PYKB01000115.1 Genbank gene 1482 2018 . - . ID=gene-C9F09_01300;Name=C9F09_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01300 PYKB01000115.1 Protein Homology CDS 1482 2018 . - 0 ID=cds-TGD05180.1;Parent=gene-C9F09_01300;Dbxref=NCBI_GP:TGD05180.1;Name=TGD05180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459175.1;locus_tag=C9F09_01300;product=hypoxanthine phosphoribosyltransferase;protein_id=TGD05180.1;transl_table=11 PYKB01000115.1 Genbank pseudogene 2224 3822 . + . ID=gene-C9F09_01305;Name=C9F09_01305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01305;pseudo=true PYKB01000115.1 Protein Homology CDS 2224 3822 . + 0 ID=cds-C9F09_01305;Parent=gene-C9F09_01305;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=C9F09_01305;product=pyrroloquinoline quinone-dependent dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKB01000538.1 1 3871 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000538.1 Genbank region 1 3871 . + . ID=PYKB01000538.1:1..3871;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000538.1 Genbank gene 1 984 . + . ID=gene-C9F09_07325;Name=C9F09_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07325 PYKB01000538.1 Protein Homology CDS 1 984 . + 0 ID=cds-TGC96773.1;Parent=gene-C9F09_07325;Dbxref=NCBI_GP:TGC96773.1;Name=TGC96773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001665562.1;locus_tag=C9F09_07325;product=cell division protein YceG;protein_id=TGC96773.1;transl_table=11 PYKB01000538.1 Genbank gene 974 1615 . + . ID=gene-C9F09_07330;Name=C9F09_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07330 PYKB01000538.1 Protein Homology CDS 974 1615 . + 0 ID=cds-TGC96774.1;Parent=gene-C9F09_07330;Dbxref=NCBI_GP:TGC96774.1;Name=TGC96774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455693.1;locus_tag=C9F09_07330;product=dTMP kinase;protein_id=TGC96774.1;transl_table=11 PYKB01000538.1 Genbank gene 1612 2616 . + . ID=gene-C9F09_07335;Name=C9F09_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07335 PYKB01000538.1 Protein Homology CDS 1612 2616 . + 0 ID=cds-TGC96775.1;Parent=gene-C9F09_07335;Dbxref=NCBI_GP:TGC96775.1;Name=TGC96775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455694.1;locus_tag=C9F09_07335;product=DNA polymerase III subunit delta';protein_id=TGC96775.1;transl_table=11 PYKB01000538.1 Genbank gene 2627 3424 . + . ID=gene-C9F09_07340;Name=C9F09_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07340 PYKB01000538.1 Protein Homology CDS 2627 3424 . + 0 ID=cds-TGC96776.1;Parent=gene-C9F09_07340;Dbxref=NCBI_GP:TGC96776.1;Name=TGC96776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455695.1;locus_tag=C9F09_07340;product=metal-dependent hydrolase;protein_id=TGC96776.1;transl_table=11 PYKB01000538.1 Genbank gene 3719 3871 . + . ID=gene-C9F09_07345;Name=C9F09_07345;end_range=3871,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07345;partial=true PYKB01000538.1 Protein Homology CDS 3719 3871 . + 0 ID=cds-TGC96777.1;Parent=gene-C9F09_07345;Dbxref=NCBI_GP:TGC96777.1;Name=TGC96777.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;end_range=3871,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475716.1;locus_tag=C9F09_07345;partial=true;product=PTS glucose transporter subunit IIBC;protein_id=TGC96777.1;transl_table=11 ##sequence-region PYKB01000985.1 1 3864 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000985.1 Genbank region 1 3864 . + . ID=PYKB01000985.1:1..3864;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000985.1 Genbank gene 76 603 . - . ID=gene-C9F09_16420;Name=C9F09_16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16420 PYKB01000985.1 Protein Homology CDS 76 603 . - 0 ID=cds-TGC88478.1;Parent=gene-C9F09_16420;Dbxref=NCBI_GP:TGC88478.1;Name=TGC88478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456228.1;locus_tag=C9F09_16420;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=TGC88478.1;transl_table=11 PYKB01000985.1 Genbank gene 644 2137 . - . ID=gene-C9F09_16425;Name=C9F09_16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16425 PYKB01000985.1 Protein Homology CDS 644 2137 . - 0 ID=cds-TGC88479.1;Parent=gene-C9F09_16425;Dbxref=NCBI_GP:TGC88479.1;Name=TGC88479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=C9F09_16425;product=GGDEF domain-containing protein;protein_id=TGC88479.1;transl_table=11 PYKB01000985.1 Genbank gene 2439 2654 . + . ID=gene-C9F09_16430;Name=C9F09_16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16430 PYKB01000985.1 Protein Homology CDS 2439 2654 . + 0 ID=cds-TGC88481.1;Parent=gene-C9F09_16430;Dbxref=NCBI_GP:TGC88481.1;Name=TGC88481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542634.1;locus_tag=C9F09_16430;product=hypothetical protein;protein_id=TGC88481.1;transl_table=11 PYKB01000985.1 Genbank gene 2807 3864 . - . ID=gene-C9F09_16435;Name=C9F09_16435;end_range=3864,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16435;partial=true PYKB01000985.1 Protein Homology CDS 2807 3864 . - 2 ID=cds-TGC88480.1;Parent=gene-C9F09_16435;Dbxref=NCBI_GP:TGC88480.1;Name=TGC88480.1;end_range=3864,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=C9F09_16435;partial=true;product=hypothetical protein;protein_id=TGC88480.1;transl_table=11 ##sequence-region PYKB01001709.1 1 3860 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001709.1 Genbank region 1 3860 . + . ID=PYKB01001709.1:1..3860;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001709.1 Genbank gene 1 403 . - . ID=gene-C9F09_29850;Name=C9F09_29850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29850;partial=true;start_range=.,1 PYKB01001709.1 Protein Homology CDS 1 403 . - 0 ID=cds-TGC71780.1;Parent=gene-C9F09_29850;Dbxref=NCBI_GP:TGC71780.1;Name=TGC71780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462605.1;locus_tag=C9F09_29850;partial=true;product=murein hydrolase activator EnvC;protein_id=TGC71780.1;start_range=.,1;transl_table=11 PYKB01001709.1 Genbank gene 413 1957 . - . ID=gene-C9F09_29855;Name=C9F09_29855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29855 PYKB01001709.1 Protein Homology CDS 413 1957 . - 0 ID=cds-TGC71776.1;Parent=gene-C9F09_29855;Dbxref=NCBI_GP:TGC71776.1;Name=TGC71776.1;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=C9F09_29855;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=TGC71776.1;transl_table=11 PYKB01001709.1 Genbank gene 2205 2636 . + . ID=gene-C9F09_29860;Name=C9F09_29860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29860 PYKB01001709.1 Protein Homology CDS 2205 2636 . + 0 ID=cds-TGC71777.1;Parent=gene-C9F09_29860;Dbxref=NCBI_GP:TGC71777.1;Name=TGC71777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458224.1;locus_tag=C9F09_29860;product=rhodanese-like domain-containing protein;protein_id=TGC71777.1;transl_table=11 PYKB01001709.1 Genbank gene 2722 2973 . + . ID=gene-C9F09_29865;Name=C9F09_29865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29865 PYKB01001709.1 Protein Homology CDS 2722 2973 . + 0 ID=cds-TGC71778.1;Parent=gene-C9F09_29865;Dbxref=NCBI_GP:TGC71778.1;Name=TGC71778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458225.1;locus_tag=C9F09_29865;product=glutaredoxin 3;protein_id=TGC71778.1;transl_table=11 PYKB01001709.1 Genbank gene 3017 3484 . + . ID=gene-C9F09_29870;Name=C9F09_29870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29870 PYKB01001709.1 Protein Homology CDS 3017 3484 . + 0 ID=cds-TGC71779.1;Parent=gene-C9F09_29870;Dbxref=NCBI_GP:TGC71779.1;Name=TGC71779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458226.1;locus_tag=C9F09_29870;product=protein-export protein SecB;protein_id=TGC71779.1;transl_table=11 PYKB01001709.1 Genbank pseudogene 3484 3840 . + . ID=gene-C9F09_29875;Name=C9F09_29875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29875;pseudo=true PYKB01001709.1 Protein Homology CDS 3484 3840 . + 0 ID=cds-C9F09_29875;Parent=gene-C9F09_29875;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458227.1;locus_tag=C9F09_29875;product=glycerol-3-phosphate dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKB01001525.1 1 3851 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001525.1 Genbank region 1 3851 . + . ID=PYKB01001525.1:1..3851;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001525.1 Genbank gene 119 1156 . - . ID=gene-C9F09_26495;Name=C9F09_26495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26495 PYKB01001525.1 Protein Homology CDS 119 1156 . - 0 ID=cds-TGC76618.1;Parent=gene-C9F09_26495;Dbxref=NCBI_GP:TGC76618.1;Name=TGC76618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455907.1;locus_tag=C9F09_26495;product=NADP-dependent oxidoreductase;protein_id=TGC76618.1;transl_table=11 PYKB01001525.1 Genbank gene 1380 1895 . + . ID=gene-C9F09_26500;Name=C9F09_26500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26500 PYKB01001525.1 Protein Homology CDS 1380 1895 . + 0 ID=cds-TGC76619.1;Parent=gene-C9F09_26500;Dbxref=NCBI_GP:TGC76619.1;Name=TGC76619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=C9F09_26500;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=TGC76619.1;transl_table=11 PYKB01001525.1 Genbank gene 1895 2344 . + . ID=gene-C9F09_26505;Name=C9F09_26505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26505 PYKB01001525.1 Protein Homology CDS 1895 2344 . + 0 ID=cds-TGC76620.1;Parent=gene-C9F09_26505;Dbxref=NCBI_GP:TGC76620.1;Name=TGC76620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455905.1;locus_tag=C9F09_26505;product=hypothetical protein;protein_id=TGC76620.1;transl_table=11 PYKB01001525.1 Genbank gene 2349 2582 . - . ID=gene-C9F09_26510;Name=C9F09_26510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26510 PYKB01001525.1 Protein Homology CDS 2349 2582 . - 0 ID=cds-TGC76621.1;Parent=gene-C9F09_26510;Dbxref=NCBI_GP:TGC76621.1;Name=TGC76621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=C9F09_26510;product=DUF2526 domain-containing protein;protein_id=TGC76621.1;transl_table=11 PYKB01001525.1 Genbank gene 2806 3851 . + . ID=gene-C9F09_26515;Name=C9F09_26515;end_range=3851,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26515;partial=true PYKB01001525.1 Protein Homology CDS 2806 3851 . + 0 ID=cds-TGC76622.1;Parent=gene-C9F09_26515;Dbxref=NCBI_GP:TGC76622.1;Name=TGC76622.1;end_range=3851,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=C9F09_26515;partial=true;product=ssrAB-activated protein;protein_id=TGC76622.1;transl_table=11 ##sequence-region PYKB01001459.1 1 11472 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001459.1 Genbank region 1 11472 . + . ID=PYKB01001459.1:1..11472;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001459.1 Genbank gene 189 575 . - . ID=gene-C9F09_25350;Name=C9F09_25350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25350 PYKB01001459.1 Protein Homology CDS 189 575 . - 0 ID=cds-TGC78044.1;Parent=gene-C9F09_25350;Dbxref=NCBI_GP:TGC78044.1;Name=TGC78044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=C9F09_25350;product=hypothetical protein;protein_id=TGC78044.1;transl_table=11 PYKB01001459.1 Genbank gene 840 1073 . - . ID=gene-C9F09_25355;Name=C9F09_25355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25355 PYKB01001459.1 Protein Homology CDS 840 1073 . - 0 ID=cds-TGC78045.1;Parent=gene-C9F09_25355;Dbxref=NCBI_GP:TGC78045.1;Name=TGC78045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=C9F09_25355;product=SirA-like protein;protein_id=TGC78045.1;transl_table=11 PYKB01001459.1 Genbank gene 1070 2335 . - . ID=gene-C9F09_25360;Name=C9F09_25360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25360 PYKB01001459.1 Protein Homology CDS 1070 2335 . - 0 ID=cds-TGC78046.1;Parent=gene-C9F09_25360;Dbxref=NCBI_GP:TGC78046.1;Name=TGC78046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456526.1;locus_tag=C9F09_25360;product=YeeE/YedE family protein;protein_id=TGC78046.1;transl_table=11 PYKB01001459.1 Genbank gene 2461 2874 . + . ID=gene-C9F09_25365;Name=C9F09_25365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25365 PYKB01001459.1 Protein Homology CDS 2461 2874 . + 0 ID=cds-TGC78047.1;Parent=gene-C9F09_25365;Dbxref=NCBI_GP:TGC78047.1;Name=TGC78047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456525.1;locus_tag=C9F09_25365;product=lipoprotein;protein_id=TGC78047.1;transl_table=11 PYKB01001459.1 Genbank gene 2914 4398 . - . ID=gene-C9F09_25370;Name=C9F09_25370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25370 PYKB01001459.1 Protein Homology CDS 2914 4398 . - 0 ID=cds-TGC78048.1;Parent=gene-C9F09_25370;Dbxref=NCBI_GP:TGC78048.1;Name=TGC78048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=C9F09_25370;product=alpha-amylase;protein_id=TGC78048.1;transl_table=11 PYKB01001459.1 Genbank gene 4470 4838 . - . ID=gene-C9F09_25375;Name=C9F09_25375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25375 PYKB01001459.1 Protein Homology CDS 4470 4838 . - 0 ID=cds-TGC78049.1;Parent=gene-C9F09_25375;Dbxref=NCBI_GP:TGC78049.1;Name=TGC78049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456523.1;locus_tag=C9F09_25375;product=flagellar protein FliT;protein_id=TGC78049.1;transl_table=11 PYKB01001459.1 Genbank gene 4838 5245 . - . ID=gene-C9F09_25380;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=C9F09_25380 PYKB01001459.1 Protein Homology CDS 4838 5245 . - 0 ID=cds-TGC78050.1;Parent=gene-C9F09_25380;Dbxref=NCBI_GP:TGC78050.1;Name=TGC78050.1;Note=flagellin specific chaperone;gbkey=CDS;gene=fliS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=C9F09_25380;product=flagellar protein FliS;protein_id=TGC78050.1;transl_table=11 PYKB01001459.1 Genbank gene 5260 6663 . - . ID=gene-C9F09_25385;Name=C9F09_25385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25385 PYKB01001459.1 Protein Homology CDS 5260 6663 . - 0 ID=cds-TGC78051.1;Parent=gene-C9F09_25385;Dbxref=NCBI_GP:TGC78051.1;Name=TGC78051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456521.1;locus_tag=C9F09_25385;product=flagellar filament capping protein FliD;protein_id=TGC78051.1;transl_table=11 PYKB01001459.1 Genbank gene 6680 6901 . + . ID=gene-C9F09_25390;Name=C9F09_25390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25390 PYKB01001459.1 Protein Homology CDS 6680 6901 . + 0 ID=cds-TGC78052.1;Parent=gene-C9F09_25390;Dbxref=NCBI_GP:TGC78052.1;Name=TGC78052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001804999.1;locus_tag=C9F09_25390;product=hypothetical protein;protein_id=TGC78052.1;transl_table=11 PYKB01001459.1 Genbank gene 6919 8184 . + . ID=gene-C9F09_25395;Name=C9F09_25395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25395 PYKB01001459.1 Protein Homology CDS 6919 8184 . + 0 ID=cds-TGC78053.1;Parent=gene-C9F09_25395;Dbxref=NCBI_GP:TGC78053.1;Name=TGC78053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002953542.1;locus_tag=C9F09_25395;product=flagellin FliC;protein_id=TGC78053.1;transl_table=11 PYKB01001459.1 Genbank gene 8263 9468 . + . ID=gene-C9F09_25400;Name=C9F09_25400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25400 PYKB01001459.1 Protein Homology CDS 8263 9468 . + 0 ID=cds-TGC78054.1;Parent=gene-C9F09_25400;Dbxref=NCBI_GP:TGC78054.1;Name=TGC78054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=C9F09_25400;product=lysine-N-methylase;protein_id=TGC78054.1;transl_table=11 PYKB01001459.1 Genbank gene 9665 10384 . + . ID=gene-C9F09_25405;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=C9F09_25405 PYKB01001459.1 Protein Homology CDS 9665 10384 . + 0 ID=cds-TGC78055.1;Parent=gene-C9F09_25405;Dbxref=NCBI_GP:TGC78055.1;Name=TGC78055.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;gene=fliA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456519.1;locus_tag=C9F09_25405;product=RNA polymerase sigma factor FliA;protein_id=TGC78055.1;transl_table=11 PYKB01001459.1 Genbank gene 10443 10994 . + . ID=gene-C9F09_25410;Name=C9F09_25410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25410 PYKB01001459.1 Protein Homology CDS 10443 10994 . + 0 ID=cds-TGC78056.1;Parent=gene-C9F09_25410;Dbxref=NCBI_GP:TGC78056.1;Name=TGC78056.1;Note=expression activator of the class 2 type of flagellar operons%2C essential to achieve maximal cell motility%3B activator of type 1 fimbrial gene expression%3B cell density-responsive regulator%3B FliZ in Salmonella typhimurium induces HilA%2C an activator of invasion genes necessary to achieve full virulence;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456518.1;locus_tag=C9F09_25410;product=protein FliZ;protein_id=TGC78056.1;transl_table=11 PYKB01001459.1 Genbank gene 11141 11472 . + . ID=gene-C9F09_25415;Name=C9F09_25415;end_range=11472,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25415;partial=true PYKB01001459.1 Protein Homology CDS 11141 11472 . + 0 ID=cds-TGC78057.1;Parent=gene-C9F09_25415;Dbxref=NCBI_GP:TGC78057.1;Name=TGC78057.1;end_range=11472,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456517.1;locus_tag=C9F09_25415;partial=true;product=cystine ABC transporter substrate-binding protein;protein_id=TGC78057.1;transl_table=11 ##sequence-region PYKB01000626.1 1 3850 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000626.1 Genbank region 1 3850 . + . ID=PYKB01000626.1:1..3850;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000626.1 Genbank gene 68 721 . + . ID=gene-C9F09_09285;Name=C9F09_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09285 PYKB01000626.1 Protein Homology CDS 68 721 . + 0 ID=cds-TGC94820.1;Parent=gene-C9F09_09285;Dbxref=NCBI_GP:TGC94820.1;Name=TGC94820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001156405.1;locus_tag=C9F09_09285;product=C4-dicarboxylate ABC transporter permease;protein_id=TGC94820.1;transl_table=11 PYKB01000626.1 Genbank gene 733 1719 . + . ID=gene-C9F09_09290;Name=C9F09_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09290 PYKB01000626.1 Protein Homology CDS 733 1719 . + 0 ID=cds-TGC94821.1;Parent=gene-C9F09_09290;Dbxref=NCBI_GP:TGC94821.1;Name=TGC94821.1;Note=involved in the transport of 2%2C3-diketo-L-gulonate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=C9F09_09290;product=TRAP transporter substrate-binding protein;protein_id=TGC94821.1;transl_table=11 PYKB01000626.1 Genbank gene 1723 3219 . + . ID=gene-C9F09_09295;Name=C9F09_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09295 PYKB01000626.1 Protein Homology CDS 1723 3219 . + 0 ID=cds-TGC94822.1;Parent=gene-C9F09_09295;Dbxref=NCBI_GP:TGC94822.1;Name=TGC94822.1;Note=catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate%2C respectively;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=C9F09_09295;product=carbohydrate kinase;protein_id=TGC94822.1;transl_table=11 PYKB01000626.1 Genbank pseudogene 3216 3761 . + . ID=gene-C9F09_09300;Name=sgbH;gbkey=Gene;gene=sgbH;gene_biotype=pseudogene;locus_tag=C9F09_09300;pseudo=true PYKB01000626.1 Protein Homology CDS 3216 3761 . + 0 ID=cds-C9F09_09300;Parent=gene-C9F09_09300;Note=catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=sgbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=C9F09_09300;product=3-keto-L-gulonate-6-phosphate decarboxylase;pseudo=true;transl_table=11 ##sequence-region PYKB01000904.1 1 3847 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000904.1 Genbank region 1 3847 . + . ID=PYKB01000904.1:1..3847;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000904.1 Genbank pseudogene 111 854 . - . ID=gene-C9F09_14875;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=pseudogene;locus_tag=C9F09_14875;pseudo=true PYKB01000904.1 Protein Homology CDS 111 854 . - 0 ID=cds-C9F09_14875;Parent=gene-C9F09_14875;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=rsmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456355.1;locus_tag=C9F09_14875;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;pseudo=true;transl_table=11 PYKB01000904.1 Genbank gene 932 3571 . - . ID=gene-C9F09_14880;Name=C9F09_14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14880 PYKB01000904.1 Protein Homology CDS 932 3571 . - 0 ID=cds-TGC90094.1;Parent=gene-C9F09_14880;Dbxref=NCBI_GP:TGC90094.1;Name=TGC90094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456354.1;locus_tag=C9F09_14880;product=MCE family protein;protein_id=TGC90094.1;transl_table=11 PYKB01000904.1 Genbank gene 3534 3847 . - . ID=gene-C9F09_14885;Name=C9F09_14885;end_range=3847,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14885;partial=true PYKB01000904.1 Protein Homology CDS 3534 3847 . - 2 ID=cds-TGC90095.1;Parent=gene-C9F09_14885;Dbxref=NCBI_GP:TGC90095.1;Name=TGC90095.1;end_range=3847,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456353.1;locus_tag=C9F09_14885;partial=true;product=hypothetical protein;protein_id=TGC90095.1;transl_table=11 ##sequence-region PYKB01001541.1 1 3839 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001541.1 Genbank region 1 3839 . + . ID=PYKB01001541.1:1..3839;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001541.1 Genbank gene 1 326 . + . ID=gene-C9F09_26850;Name=C9F09_26850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26850;partial=true;start_range=.,1 PYKB01001541.1 Protein Homology CDS 1 326 . + 2 ID=cds-TGC76227.1;Parent=gene-C9F09_26850;Dbxref=NCBI_GP:TGC76227.1;Name=TGC76227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454777.1;locus_tag=C9F09_26850;partial=true;product=transcriptional regulator;protein_id=TGC76227.1;start_range=.,1;transl_table=11 PYKB01001541.1 Genbank gene 356 1150 . - . ID=gene-C9F09_26855;Name=C9F09_26855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26855 PYKB01001541.1 Protein Homology CDS 356 1150 . - 0 ID=cds-TGC76228.1;Parent=gene-C9F09_26855;Dbxref=NCBI_GP:TGC76228.1;Name=TGC76228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=C9F09_26855;product=S-adenosylmethionine decarboxylase proenzyme;protein_id=TGC76228.1;transl_table=11 PYKB01001541.1 Genbank gene 1171 2031 . - . ID=gene-C9F09_26860;Name=C9F09_26860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26860 PYKB01001541.1 Protein Homology CDS 1171 2031 . - 0 ID=cds-TGC76229.1;Parent=gene-C9F09_26860;Dbxref=NCBI_GP:TGC76229.1;Name=TGC76229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=C9F09_26860;product=polyamine aminopropyltransferase;protein_id=TGC76229.1;transl_table=11 PYKB01001541.1 Genbank gene 2138 2485 . - . ID=gene-C9F09_26865;Name=C9F09_26865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26865 PYKB01001541.1 Protein Homology CDS 2138 2485 . - 0 ID=cds-TGC76230.1;Parent=gene-C9F09_26865;Dbxref=NCBI_GP:TGC76230.1;Name=TGC76230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=C9F09_26865;product=hypothetical protein;protein_id=TGC76230.1;transl_table=11 PYKB01001541.1 Genbank pseudogene 2687 3790 . + . ID=gene-C9F09_26870;Name=C9F09_26870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_26870;pseudo=true PYKB01001541.1 Protein Homology CDS 2687 3790 . + 0 ID=cds-C9F09_26870;Parent=gene-C9F09_26870;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=C9F09_26870;product=multicopper oxidase CueO;pseudo=true;transl_table=11 ##sequence-region PYKB01000469.1 1 3828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000469.1 Genbank region 1 3828 . + . ID=PYKB01000469.1:1..3828;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000469.1 Genbank pseudogene 29 265 . + . ID=gene-C9F09_05860;Name=C9F09_05860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05860;pseudo=true PYKB01000469.1 Protein Homology CDS 29 265 . + 0 ID=cds-C9F09_05860;Parent=gene-C9F09_05860;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002346786.1;locus_tag=C9F09_05860;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000469.1 Genbank gene 259 585 . + . ID=gene-C9F09_05865;Name=C9F09_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05865 PYKB01000469.1 Protein Homology CDS 259 585 . + 0 ID=cds-TGC98327.1;Parent=gene-C9F09_05865;Dbxref=NCBI_GP:TGC98327.1;Name=TGC98327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456564.1;locus_tag=C9F09_05865;product=DUF1493 domain-containing protein;protein_id=TGC98327.1;transl_table=11 PYKB01000469.1 Genbank gene 574 735 . - . ID=gene-C9F09_05870;Name=C9F09_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05870 PYKB01000469.1 Protein Homology CDS 574 735 . - 0 ID=cds-TGC98328.1;Parent=gene-C9F09_05870;Dbxref=NCBI_GP:TGC98328.1;Name=TGC98328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=C9F09_05870;product=cytoplasmic protein;protein_id=TGC98328.1;transl_table=11 PYKB01000469.1 Genbank gene 781 2235 . + . ID=gene-C9F09_05875;Name=C9F09_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05875 PYKB01000469.1 Protein Homology CDS 781 2235 . + 0 ID=cds-TGC98329.1;Parent=gene-C9F09_05875;Dbxref=NCBI_GP:TGC98329.1;Name=TGC98329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=C9F09_05875;product=AMP nucleosidase;protein_id=TGC98329.1;transl_table=11 PYKB01000469.1 Genbank pseudogene 2368 2574 . + . ID=gene-C9F09_05880;Name=C9F09_05880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05880;pseudo=true PYKB01000469.1 Protein Homology CDS 2368 2574 . + 0 ID=cds-C9F09_05880;Parent=gene-C9F09_05880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991988.1;locus_tag=C9F09_05880;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000469.1 Genbank pseudogene 2982 3086 . + . ID=gene-C9F09_05885;Name=C9F09_05885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05885;pseudo=true PYKB01000469.1 Protein Homology CDS 2982 3086 . + 0 ID=cds-C9F09_05885;Parent=gene-C9F09_05885;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=C9F09_05885;product=YajQ family cyclic di-GMP-binding protein;pseudo=true;transl_table=11 PYKB01000469.1 Genbank gene 3144 3828 . - . ID=gene-C9F09_05890;Name=C9F09_05890;end_range=3828,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05890;partial=true PYKB01000469.1 Protein Homology CDS 3144 3828 . - 1 ID=cds-TGC98330.1;Parent=gene-C9F09_05890;Dbxref=NCBI_GP:TGC98330.1;Name=TGC98330.1;end_range=3828,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=C9F09_05890;partial=true;product=hypothetical protein;protein_id=TGC98330.1;transl_table=11 ##sequence-region PYKB01000475.1 1 3826 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000475.1 Genbank region 1 3826 . + . ID=PYKB01000475.1:1..3826;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000475.1 Genbank pseudogene 23 424 . - . ID=gene-C9F09_05950;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=pseudogene;locus_tag=C9F09_05950;pseudo=true PYKB01000475.1 Protein Homology CDS 23 424 . - 0 ID=cds-C9F09_05950;Parent=gene-C9F09_05950;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=tsaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=C9F09_05950;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;pseudo=true;transl_table=11 PYKB01000475.1 Genbank gene 421 825 . - . ID=gene-C9F09_05955;Name=C9F09_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05955 PYKB01000475.1 Protein Homology CDS 421 825 . - 0 ID=cds-TGC98222.1;Parent=gene-C9F09_05955;Dbxref=NCBI_GP:TGC98222.1;Name=TGC98222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454853.1;locus_tag=C9F09_05955;product=Rcs stress response system protein RcsF;protein_id=TGC98222.1;transl_table=11 PYKB01000475.1 Genbank gene 944 1759 . - . ID=gene-C9F09_05960;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=C9F09_05960 PYKB01000475.1 Protein Homology CDS 944 1759 . - 0 ID=cds-TGC98223.1;Parent=gene-C9F09_05960;Dbxref=NCBI_GP:TGC98223.1;Name=TGC98223.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=C9F09_05960;product=methionine ABC transporter substrate-binding protein MetQ;protein_id=TGC98223.1;transl_table=11 PYKB01000475.1 Genbank gene 1798 2451 . - . ID=gene-C9F09_05965;Name=C9F09_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05965 PYKB01000475.1 Protein Homology CDS 1798 2451 . - 0 ID=cds-TGC98224.1;Parent=gene-C9F09_05965;Dbxref=NCBI_GP:TGC98224.1;Name=TGC98224.1;Note=part of the MetNIQ methionine uptake system;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=C9F09_05965;product=methionine ABC transporter;protein_id=TGC98224.1;transl_table=11 PYKB01000475.1 Genbank gene 2444 3475 . - . ID=gene-C9F09_05970;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=C9F09_05970 PYKB01000475.1 Protein Homology CDS 2444 3475 . - 0 ID=cds-TGC98225.1;Parent=gene-C9F09_05970;Dbxref=NCBI_GP:TGC98225.1;Name=TGC98225.1;gbkey=CDS;gene=metN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=C9F09_05970;product=methionine import ATP-binding protein MetN 1;protein_id=TGC98225.1;transl_table=11 PYKB01000475.1 Genbank gene 3665 3826 . + . ID=gene-C9F09_05975;Name=C9F09_05975;end_range=3826,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05975;partial=true PYKB01000475.1 Protein Homology CDS 3665 3826 . + 0 ID=cds-TGC98226.1;Parent=gene-C9F09_05975;Dbxref=NCBI_GP:TGC98226.1;Name=TGC98226.1;end_range=3826,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454857.1;locus_tag=C9F09_05975;partial=true;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=TGC98226.1;transl_table=11 ##sequence-region PYKB01000870.1 1 3819 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000870.1 Genbank region 1 3819 . + . ID=PYKB01000870.1:1..3819;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000870.1 Genbank pseudogene 1 1238 . + . ID=gene-C9F09_14125;Name=C9F09_14125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_14125;pseudo=true PYKB01000870.1 Protein Homology CDS 1 1238 . + 2 ID=cds-C9F09_14125;Parent=gene-C9F09_14125;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457214.1;locus_tag=C9F09_14125;product=porin;pseudo=true;transl_table=11 PYKB01000870.1 Genbank pseudogene 1287 2825 . - . ID=gene-C9F09_14130;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=pseudogene;locus_tag=C9F09_14130;pseudo=true PYKB01000870.1 Protein Homology CDS 1287 2825 . - 0 ID=cds-C9F09_14130;Parent=gene-C9F09_14130;Note=internal stop;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=C9F09_14130;product=multidrug efflux MFS transporter subunit EmrB;pseudo=true;transl_table=11 PYKB01000870.1 Genbank gene 2842 3819 . - . ID=gene-C9F09_14135;Name=C9F09_14135;end_range=3819,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14135;partial=true PYKB01000870.1 Protein Homology CDS 2842 3819 . - 0 ID=cds-TGC90786.1;Parent=gene-C9F09_14135;Dbxref=NCBI_GP:TGC90786.1;Name=TGC90786.1;end_range=3819,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457212.1;locus_tag=C9F09_14135;partial=true;product=multidrug export protein EmrA;protein_id=TGC90786.1;transl_table=11 ##sequence-region PYKB01001503.1 1 3818 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001503.1 Genbank region 1 3818 . + . ID=PYKB01001503.1:1..3818;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001503.1 Genbank gene 1 401 . - . ID=gene-C9F09_26085;Name=C9F09_26085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26085;partial=true;start_range=.,1 PYKB01001503.1 Protein Homology CDS 1 401 . - 0 ID=cds-TGC77215.1;Parent=gene-C9F09_26085;Dbxref=NCBI_GP:TGC77215.1;Name=TGC77215.1;Note=protease Do%3B required at high temperature%3B degrades damaged proteins;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454817.1;locus_tag=C9F09_26085;partial=true;product=serine endoprotease;protein_id=TGC77215.1;start_range=.,1;transl_table=11 PYKB01001503.1 Genbank gene 531 2048 . - . ID=gene-C9F09_26090;Name=C9F09_26090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26090 PYKB01001503.1 Protein Homology CDS 531 2048 . - 0 ID=cds-TGC77211.1;Parent=gene-C9F09_26090;Dbxref=NCBI_GP:TGC77211.1;Name=TGC77211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454816.1;locus_tag=C9F09_26090;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=TGC77211.1;transl_table=11 PYKB01001503.1 Genbank gene 2133 2831 . + . ID=gene-C9F09_26095;Name=C9F09_26095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26095 PYKB01001503.1 Protein Homology CDS 2133 2831 . + 0 ID=cds-TGC77212.1;Parent=gene-C9F09_26095;Dbxref=NCBI_GP:TGC77212.1;Name=TGC77212.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454815.1;locus_tag=C9F09_26095;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=TGC77212.1;transl_table=11 PYKB01001503.1 Genbank gene 2824 3624 . + . ID=gene-C9F09_26100;Name=C9F09_26100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26100 PYKB01001503.1 Protein Homology CDS 2824 3624 . + 0 ID=cds-TGC77213.1;Parent=gene-C9F09_26100;Dbxref=NCBI_GP:TGC77213.1;Name=TGC77213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=C9F09_26100;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=TGC77213.1;transl_table=11 PYKB01001503.1 Genbank gene 3661 3818 . + . ID=gene-C9F09_26105;Name=C9F09_26105;end_range=3818,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26105;partial=true PYKB01001503.1 Protein Homology CDS 3661 3818 . + 0 ID=cds-TGC77214.1;Parent=gene-C9F09_26105;Dbxref=NCBI_GP:TGC77214.1;Name=TGC77214.1;end_range=3818,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308188.1;locus_tag=C9F09_26105;partial=true;product=hypothetical protein;protein_id=TGC77214.1;transl_table=11 ##sequence-region PYKB01001137.1 1 3813 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001137.1 Genbank region 1 3813 . + . ID=PYKB01001137.1:1..3813;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001137.1 Genbank gene 1 270 . - . ID=gene-C9F09_19230;Name=C9F09_19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19230;partial=true;start_range=.,1 PYKB01001137.1 Protein Homology CDS 1 270 . - 0 ID=cds-TGC84992.1;Parent=gene-C9F09_19230;Dbxref=NCBI_GP:TGC84992.1;Name=TGC84992.1;Note=with GsiABD is involved in the transport of glutathione into the cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455384.1;locus_tag=C9F09_19230;partial=true;product=glutathione ABC transporter permease GsiC;protein_id=TGC84992.1;start_range=.,1;transl_table=11 PYKB01001137.1 Genbank gene 331 1869 . - . ID=gene-C9F09_19235;Name=C9F09_19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19235 PYKB01001137.1 Protein Homology CDS 331 1869 . - 0 ID=cds-TGC84993.1;Parent=gene-C9F09_19235;Dbxref=NCBI_GP:TGC84993.1;Name=TGC84993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455383.1;locus_tag=C9F09_19235;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=TGC84993.1;transl_table=11 PYKB01001137.1 Genbank gene 1902 3773 . - . ID=gene-C9F09_19240;Name=C9F09_19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19240 PYKB01001137.1 Protein Homology CDS 1902 3773 . - 0 ID=cds-TGC84994.1;Parent=gene-C9F09_19240;Dbxref=NCBI_GP:TGC84994.1;Name=TGC84994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=C9F09_19240;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=TGC84994.1;transl_table=11 ##sequence-region PYKB01000350.1 1 3811 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000350.1 Genbank region 1 3811 . + . ID=PYKB01000350.1:1..3811;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000350.1 Genbank pseudogene 66 641 . + . ID=gene-C9F09_03935;Name=C9F09_03935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03935;pseudo=true PYKB01000350.1 Protein Homology CDS 66 641 . + 0 ID=cds-C9F09_03935;Parent=gene-C9F09_03935;Note=with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456894.1;locus_tag=C9F09_03935;product=amino acid ABC transporter permease;pseudo=true;transl_table=11 PYKB01000350.1 Genbank gene 655 1428 . + . ID=gene-C9F09_03940;Name=C9F09_03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03940 PYKB01000350.1 Protein Homology CDS 655 1428 . + 0 ID=cds-TGD00518.1;Parent=gene-C9F09_03940;Dbxref=NCBI_GP:TGD00518.1;Name=TGD00518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=C9F09_03940;product=histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP;protein_id=TGD00518.1;transl_table=11 PYKB01000350.1 Genbank gene 1480 2373 . - . ID=gene-C9F09_03945;Name=C9F09_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03945 PYKB01000350.1 Protein Homology CDS 1480 2373 . - 0 ID=cds-TGD00515.1;Parent=gene-C9F09_03945;Dbxref=NCBI_GP:TGD00515.1;Name=TGD00515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=C9F09_03945;product=TIGR01777 family protein;protein_id=TGD00515.1;transl_table=11 PYKB01000350.1 Genbank gene 2499 3146 . - . ID=gene-C9F09_03950;Name=C9F09_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03950 PYKB01000350.1 Protein Homology CDS 2499 3146 . - 0 ID=cds-TGD00516.1;Parent=gene-C9F09_03950;Dbxref=NCBI_GP:TGD00516.1;Name=TGD00516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=C9F09_03950;product=GSH-dependent disulfide bond oxidoreductase;protein_id=TGD00516.1;transl_table=11 PYKB01000350.1 Genbank gene 3289 3811 . + . ID=gene-C9F09_03955;Name=C9F09_03955;end_range=3811,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03955;partial=true PYKB01000350.1 Protein Homology CDS 3289 3811 . + 0 ID=cds-TGD00517.1;Parent=gene-C9F09_03955;Dbxref=NCBI_GP:TGD00517.1;Name=TGD00517.1;end_range=3811,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456890.1;locus_tag=C9F09_03955;partial=true;product=glutathione transferase;protein_id=TGD00517.1;transl_table=11 ##sequence-region PYKB01000502.1 1 3795 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000502.1 Genbank region 1 3795 . + . ID=PYKB01000502.1:1..3795;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000502.1 Genbank gene 1 207 . + . ID=gene-C9F09_06450;Name=C9F09_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06450;partial=true;start_range=.,1 PYKB01000502.1 Protein Homology CDS 1 207 . + 0 ID=cds-TGC97611.1;Parent=gene-C9F09_06450;Dbxref=NCBI_GP:TGC97611.1;Name=TGC97611.1;Note=required for efficient enterobactin production;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455175.1;locus_tag=C9F09_06450;partial=true;product=thioesterase;protein_id=TGC97611.1;start_range=.,1;transl_table=11 PYKB01000502.1 Genbank gene 389 2494 . + . ID=gene-C9F09_06455;Name=C9F09_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06455 PYKB01000502.1 Protein Homology CDS 389 2494 . + 0 ID=cds-TGC97612.1;Parent=gene-C9F09_06455;Dbxref=NCBI_GP:TGC97612.1;Name=TGC97612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=C9F09_06455;product=carbon starvation protein CstA;protein_id=TGC97612.1;transl_table=11 PYKB01000502.1 Genbank gene 2558 2755 . + . ID=gene-C9F09_06460;Name=C9F09_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06460 PYKB01000502.1 Protein Homology CDS 2558 2755 . + 0 ID=cds-TGC97613.1;Parent=gene-C9F09_06460;Dbxref=NCBI_GP:TGC97613.1;Name=TGC97613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=C9F09_06460;product=DUF466 domain-containing protein;protein_id=TGC97613.1;transl_table=11 PYKB01000502.1 Genbank gene 2791 3795 . - . ID=gene-C9F09_06465;Name=C9F09_06465;end_range=3795,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06465;partial=true PYKB01000502.1 Protein Homology CDS 2791 3795 . - 0 ID=cds-TGC97614.1;Parent=gene-C9F09_06465;Dbxref=NCBI_GP:TGC97614.1;Name=TGC97614.1;end_range=3795,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=C9F09_06465;partial=true;product=oxidoreductase;protein_id=TGC97614.1;transl_table=11 ##sequence-region PYKB01001191.1 1 11254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001191.1 Genbank region 1 11254 . + . ID=PYKB01001191.1:1..11254;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001191.1 Genbank gene 1 317 . - . ID=gene-C9F09_20245;Name=C9F09_20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20245;partial=true;start_range=.,1 PYKB01001191.1 Protein Homology CDS 1 317 . - 0 ID=cds-TGC83719.1;Parent=gene-C9F09_20245;Dbxref=NCBI_GP:TGC83719.1;Name=TGC83719.1;Note=ABC transporter maintaining outer membrane lipid asymmetry;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=C9F09_20245;partial=true;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=TGC83719.1;start_range=.,1;transl_table=11 PYKB01001191.1 Genbank gene 530 1507 . + . ID=gene-C9F09_20250;Name=C9F09_20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20250 PYKB01001191.1 Protein Homology CDS 530 1507 . + 0 ID=cds-TGC83720.1;Parent=gene-C9F09_20250;Dbxref=NCBI_GP:TGC83720.1;Name=TGC83720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=C9F09_20250;product=calcium/sodium antiporter;protein_id=TGC83720.1;transl_table=11 PYKB01001191.1 Genbank gene 1521 2507 . + . ID=gene-C9F09_20255;Name=C9F09_20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20255 PYKB01001191.1 Protein Homology CDS 1521 2507 . + 0 ID=cds-TGC83721.1;Parent=gene-C9F09_20255;Dbxref=NCBI_GP:TGC83721.1;Name=TGC83721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=C9F09_20255;product=arabinose 5-phosphate isomerase KdsD;protein_id=TGC83721.1;transl_table=11 PYKB01001191.1 Genbank gene 2528 3094 . + . ID=gene-C9F09_20260;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=C9F09_20260 PYKB01001191.1 Protein Homology CDS 2528 3094 . + 0 ID=cds-TGC83722.1;Parent=gene-C9F09_20260;Dbxref=NCBI_GP:TGC83722.1;Name=TGC83722.1;gbkey=CDS;gene=kdsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457695.1;locus_tag=C9F09_20260;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC;protein_id=TGC83722.1;transl_table=11 PYKB01001191.1 Genbank gene 3091 3666 . + . ID=gene-C9F09_20265;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=C9F09_20265 PYKB01001191.1 Protein Homology CDS 3091 3666 . + 0 ID=cds-TGC83723.1;Parent=gene-C9F09_20265;Dbxref=NCBI_GP:TGC83723.1;Name=TGC83723.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457696.1;locus_tag=C9F09_20265;product=LPS export ABC transporter periplasmic protein LptC;protein_id=TGC83723.1;transl_table=11 PYKB01001191.1 Genbank gene 3635 4189 . + . ID=gene-C9F09_20270;Name=C9F09_20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20270 PYKB01001191.1 Protein Homology CDS 3635 4189 . + 0 ID=cds-TGC83724.1;Parent=gene-C9F09_20270;Dbxref=NCBI_GP:TGC83724.1;Name=TGC83724.1;Note=LptA%3B periplasmic binding protein part of a putative ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=C9F09_20270;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=TGC83724.1;transl_table=11 PYKB01001191.1 Genbank gene 4196 4921 . + . ID=gene-C9F09_20275;Name=C9F09_20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20275 PYKB01001191.1 Protein Homology CDS 4196 4921 . + 0 ID=cds-TGC83725.1;Parent=gene-C9F09_20275;Dbxref=NCBI_GP:TGC83725.1;Name=TGC83725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=C9F09_20275;product=ABC transporter ATP-binding protein;protein_id=TGC83725.1;transl_table=11 PYKB01001191.1 Genbank gene 4969 6402 . + . ID=gene-C9F09_20280;Name=C9F09_20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20280 PYKB01001191.1 Protein Homology CDS 4969 6402 . + 0 ID=cds-TGC83726.1;Parent=gene-C9F09_20280;Dbxref=NCBI_GP:TGC83726.1;Name=TGC83726.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=C9F09_20280;product=RNA polymerase factor sigma-54;protein_id=TGC83726.1;transl_table=11 PYKB01001191.1 Genbank gene 6425 6712 . + . ID=gene-C9F09_20285;Name=C9F09_20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20285 PYKB01001191.1 Protein Homology CDS 6425 6712 . + 0 ID=cds-TGC83727.1;Parent=gene-C9F09_20285;Dbxref=NCBI_GP:TGC83727.1;Name=TGC83727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007369896.1;locus_tag=C9F09_20285;product=ribosome hibernation promoting factor;protein_id=TGC83727.1;transl_table=11 PYKB01001191.1 Genbank gene 6830 7321 . + . ID=gene-C9F09_20290;Name=C9F09_20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20290 PYKB01001191.1 Protein Homology CDS 6830 7321 . + 0 ID=cds-TGC83728.1;Parent=gene-C9F09_20290;Dbxref=NCBI_GP:TGC83728.1;Name=TGC83728.1;Note=involved in nitrogen metabolism%3B protein IIA is phosphorylated by enzyme I(Ntr);gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457701.1;locus_tag=C9F09_20290;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=TGC83728.1;transl_table=11 PYKB01001191.1 Genbank gene 7367 8221 . + . ID=gene-C9F09_20295;Name=C9F09_20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20295 PYKB01001191.1 Protein Homology CDS 7367 8221 . + 0 ID=cds-TGC83729.1;Parent=gene-C9F09_20295;Dbxref=NCBI_GP:TGC83729.1;Name=TGC83729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121329.1;locus_tag=C9F09_20295;product=RNase adaptor protein RapZ;protein_id=TGC83729.1;transl_table=11 PYKB01001191.1 Genbank gene 8218 8490 . + . ID=gene-C9F09_20300;Name=C9F09_20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20300 PYKB01001191.1 Protein Homology CDS 8218 8490 . + 0 ID=cds-TGC83730.1;Parent=gene-C9F09_20300;Dbxref=NCBI_GP:TGC83730.1;Name=TGC83730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=C9F09_20300;product=HPr family phosphocarrier protein;protein_id=TGC83730.1;transl_table=11 PYKB01001191.1 Genbank pseudogene 8508 8742 . - . ID=gene-C9F09_20305;Name=C9F09_20305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_20305;pseudo=true PYKB01001191.1 Protein Homology CDS 8508 8742 . - 0 ID=cds-C9F09_20305;Parent=gene-C9F09_20305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844637.1;locus_tag=C9F09_20305;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001191.1 Genbank gene 8741 9373 . + . ID=gene-C9F09_20310;Name=C9F09_20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20310 PYKB01001191.1 Protein Homology CDS 8741 9373 . + 0 ID=cds-TGC83731.1;Parent=gene-C9F09_20310;Dbxref=NCBI_GP:TGC83731.1;Name=TGC83731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457704.1;locus_tag=C9F09_20310;product=hypothetical protein;protein_id=TGC83731.1;transl_table=11 PYKB01001191.1 Genbank gene 9448 10176 . - . ID=gene-C9F09_20315;Name=C9F09_20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20315 PYKB01001191.1 Protein Homology CDS 9448 10176 . - 0 ID=cds-TGC83732.1;Parent=gene-C9F09_20315;Dbxref=NCBI_GP:TGC83732.1;Name=TGC83732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457705.1;locus_tag=C9F09_20315;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=TGC83732.1;transl_table=11 PYKB01001191.1 Genbank gene 10173 10826 . - . ID=gene-C9F09_20320;Name=C9F09_20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20320 PYKB01001191.1 Protein Homology CDS 10173 10826 . - 0 ID=cds-TGC83733.1;Parent=gene-C9F09_20320;Dbxref=NCBI_GP:TGC83733.1;Name=TGC83733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=C9F09_20320;product=isoprenoid biosynthesis protein ElbB;protein_id=TGC83733.1;transl_table=11 PYKB01001191.1 Genbank gene 11053 11254 . - . ID=gene-C9F09_20325;Name=C9F09_20325;end_range=11254,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20325;partial=true PYKB01001191.1 Protein Homology CDS 11053 11254 . - 1 ID=cds-TGC83734.1;Parent=gene-C9F09_20325;Dbxref=NCBI_GP:TGC83734.1;Name=TGC83734.1;end_range=11254,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457707.1;locus_tag=C9F09_20325;partial=true;product=hypothetical protein;protein_id=TGC83734.1;transl_table=11 ##sequence-region PYKB01000787.1 1 3792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000787.1 Genbank region 1 3792 . + . ID=PYKB01000787.1:1..3792;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000787.1 Genbank gene 74 271 . - . ID=gene-C9F09_12200;Name=C9F09_12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12200 PYKB01000787.1 GeneMarkS+ CDS 74 271 . - 0 ID=cds-TGC92353.1;Parent=gene-C9F09_12200;Dbxref=NCBI_GP:TGC92353.1;Name=TGC92353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_12200;product=hypothetical protein;protein_id=TGC92353.1;transl_table=11 PYKB01000787.1 Genbank pseudogene 174 1409 . + . ID=gene-C9F09_12205;Name=dipZ;gbkey=Gene;gene=dipZ;gene_biotype=pseudogene;locus_tag=C9F09_12205;pseudo=true PYKB01000787.1 Protein Homology CDS 174 1409 . + 0 ID=cds-C9F09_12205;Parent=gene-C9F09_12205;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=dipZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418559.1;locus_tag=C9F09_12205;product=protein-disulfide reductase DsbD;pseudo=true;transl_table=11 PYKB01000787.1 Genbank gene 1446 2021 . + . ID=gene-C9F09_12210;Name=C9F09_12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12210 PYKB01000787.1 Protein Homology CDS 1446 2021 . + 0 ID=cds-TGC92354.1;Parent=gene-C9F09_12210;Dbxref=NCBI_GP:TGC92354.1;Name=TGC92354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=C9F09_12210;product=transcriptional regulator;protein_id=TGC92354.1;transl_table=11 PYKB01000787.1 Genbank gene 2137 2212 . + . ID=gene-C9F09_12215;Name=C9F09_12215;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_12215 PYKB01000787.1 tRNAscan-SE tRNA 2137 2212 . + . ID=rna-C9F09_12215;Parent=gene-C9F09_12215;anticodon=(pos:2170..2172);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_12215;product=tRNA-Phe PYKB01000787.1 tRNAscan-SE exon 2137 2212 . + . ID=exon-C9F09_12215-1;Parent=rna-C9F09_12215;anticodon=(pos:2170..2172);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_12215;product=tRNA-Phe PYKB01000787.1 Genbank gene 2292 2351 . - . ID=gene-C9F09_12220;Name=C9F09_12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12220 PYKB01000787.1 Protein Homology CDS 2292 2351 . - 0 ID=cds-TGC92356.1;Parent=gene-C9F09_12220;Dbxref=NCBI_GP:TGC92356.1;Name=TGC92356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193312.1;locus_tag=C9F09_12220;product=hypothetical protein;protein_id=TGC92356.1;transl_table=11 PYKB01000787.1 Genbank gene 2923 3675 . + . ID=gene-C9F09_12225;Name=C9F09_12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12225 PYKB01000787.1 Protein Homology CDS 2923 3675 . + 0 ID=cds-TGC92355.1;Parent=gene-C9F09_12225;Dbxref=NCBI_GP:TGC92355.1;Name=TGC92355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=C9F09_12225;product=non-specific acid phosphatase;protein_id=TGC92355.1;transl_table=11 ##sequence-region PYKB01000088.1 1 3791 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000088.1 Genbank region 1 3791 . + . ID=PYKB01000088.1:1..3791;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000088.1 Genbank gene 1 755 . - . ID=gene-C9F09_01045;Name=C9F09_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01045;partial=true;start_range=.,1 PYKB01000088.1 Protein Homology CDS 1 755 . - 0 ID=cds-TGD05682.1;Parent=gene-C9F09_01045;Dbxref=NCBI_GP:TGD05682.1;Name=TGD05682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459269.1;locus_tag=C9F09_01045;partial=true;product=hypothetical protein;protein_id=TGD05682.1;start_range=.,1;transl_table=11 PYKB01000088.1 Genbank gene 1123 2025 . + . ID=gene-C9F09_01050;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=C9F09_01050 PYKB01000088.1 Protein Homology CDS 1123 2025 . + 0 ID=cds-TGD05683.1;Parent=gene-C9F09_01050;Dbxref=NCBI_GP:TGD05683.1;Name=TGD05683.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=C9F09_01050;product=type VI secretion system-associated protein TagK;protein_id=TGD05683.1;transl_table=11 PYKB01000088.1 Genbank gene 2012 2836 . + . ID=gene-C9F09_01055;Name=C9F09_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01055 PYKB01000088.1 Protein Homology CDS 2012 2836 . + 0 ID=cds-TGD05684.1;Parent=gene-C9F09_01055;Dbxref=NCBI_GP:TGD05684.1;Name=TGD05684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=C9F09_01055;product=impE family protein;protein_id=TGD05684.1;transl_table=11 PYKB01000088.1 Genbank gene 2833 3327 . + . ID=gene-C9F09_01060;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=C9F09_01060 PYKB01000088.1 Protein Homology CDS 2833 3327 . + 0 ID=cds-TGD05685.1;Parent=gene-C9F09_01060;Dbxref=NCBI_GP:TGD05685.1;Name=TGD05685.1;gbkey=CDS;gene=tssE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=C9F09_01060;product=type VI secretion system baseplate subunit TssE;protein_id=TGD05685.1;transl_table=11 PYKB01000088.1 Genbank gene 3343 3791 . + . ID=gene-C9F09_01065;Name=C9F09_01065;end_range=3791,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01065;partial=true PYKB01000088.1 Protein Homology CDS 3343 3791 . + 0 ID=cds-TGD05686.1;Parent=gene-C9F09_01065;Dbxref=NCBI_GP:TGD05686.1;Name=TGD05686.1;end_range=3791,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=C9F09_01065;partial=true;product=type VI secretion system baseplate subunit TssF;protein_id=TGD05686.1;transl_table=11 ##sequence-region PYKB01001550.1 1 3784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001550.1 Genbank region 1 3784 . + . ID=PYKB01001550.1:1..3784;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001550.1 Genbank gene 1 95 . - . ID=gene-C9F09_27055;Name=C9F09_27055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27055;partial=true;start_range=.,1 PYKB01001550.1 Protein Homology CDS 1 95 . - 0 ID=cds-TGC76012.1;Parent=gene-C9F09_27055;Dbxref=NCBI_GP:TGC76012.1;Name=TGC76012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=C9F09_27055;partial=true;product=isocitrate dehydrogenase;protein_id=TGC76012.1;start_range=.,1;transl_table=11 PYKB01001550.1 Genbank gene 267 932 . + . ID=gene-C9F09_27060;Name=C9F09_27060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27060 PYKB01001550.1 Protein Homology CDS 267 932 . + 0 ID=cds-TGC76008.1;Parent=gene-C9F09_27060;Dbxref=NCBI_GP:TGC76008.1;Name=TGC76008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=C9F09_27060;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=TGC76008.1;transl_table=11 PYKB01001550.1 Genbank gene 929 1258 . + . ID=gene-C9F09_27065;Name=C9F09_27065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27065 PYKB01001550.1 Protein Homology CDS 929 1258 . + 0 ID=cds-TGC76009.1;Parent=gene-C9F09_27065;Dbxref=NCBI_GP:TGC76009.1;Name=TGC76009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455728.1;locus_tag=C9F09_27065;product=DUF1311 domain-containing protein;protein_id=TGC76009.1;transl_table=11 PYKB01001550.1 Genbank gene 1270 1731 . + . ID=gene-C9F09_27070;Name=C9F09_27070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27070 PYKB01001550.1 Protein Homology CDS 1270 1731 . + 0 ID=cds-TGC76010.1;Parent=gene-C9F09_27070;Dbxref=NCBI_GP:TGC76010.1;Name=TGC76010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455727.1;locus_tag=C9F09_27070;product=NUDIX hydrolase;protein_id=TGC76010.1;transl_table=11 PYKB01001550.1 Genbank gene 1748 2890 . + . ID=gene-C9F09_27075;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=C9F09_27075 PYKB01001550.1 Protein Homology CDS 1748 2890 . + 0 ID=cds-TGC76013.1;Parent=gene-C9F09_27075;Dbxref=NCBI_GP:TGC76013.1;Name=TGC76013.1;gbkey=CDS;gene=mnmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455726.1;locus_tag=C9F09_27075;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=TGC76013.1;transl_table=11 PYKB01001550.1 Genbank gene 2977 3618 . + . ID=gene-C9F09_27080;Name=C9F09_27080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27080 PYKB01001550.1 Protein Homology CDS 2977 3618 . + 0 ID=cds-TGC76014.1;Parent=gene-C9F09_27080;Dbxref=NCBI_GP:TGC76014.1;Name=TGC76014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120991.1;locus_tag=C9F09_27080;product=lysogenization protein HflD;protein_id=TGC76014.1;transl_table=11 PYKB01001550.1 Genbank gene 3622 3784 . + . ID=gene-C9F09_27085;Name=C9F09_27085;end_range=3784,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27085;partial=true PYKB01001550.1 Protein Homology CDS 3622 3784 . + 0 ID=cds-TGC76011.1;Parent=gene-C9F09_27085;Dbxref=NCBI_GP:TGC76011.1;Name=TGC76011.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;end_range=3784,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819529.1;locus_tag=C9F09_27085;partial=true;product=adenylosuccinate lyase;protein_id=TGC76011.1;transl_table=11 ##sequence-region PYKB01000316.1 1 3783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000316.1 Genbank region 1 3783 . + . ID=PYKB01000316.1:1..3783;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000316.1 Genbank gene 1 1648 . - . ID=gene-C9F09_03540;Name=C9F09_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03540;partial=true;start_range=.,1 PYKB01000316.1 Protein Homology CDS 1 1648 . - 0 ID=cds-TGD01234.1;Parent=gene-C9F09_03540;Dbxref=NCBI_GP:TGD01234.1;Name=TGD01234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457112.1;locus_tag=C9F09_03540;partial=true;product=elongation factor 4;protein_id=TGD01234.1;start_range=.,1;transl_table=11 PYKB01000316.1 Genbank gene 1754 1870 . - . ID=gene-C9F09_03545;Name=C9F09_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03545 PYKB01000316.1 Protein Homology CDS 1754 1870 . - 0 ID=cds-TGD01230.1;Parent=gene-C9F09_03545;Dbxref=NCBI_GP:TGD01230.1;Name=TGD01230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218543.1;locus_tag=C9F09_03545;product=transcriptional regulator;protein_id=TGD01230.1;transl_table=11 PYKB01000316.1 Genbank gene 1900 2379 . - . ID=gene-C9F09_03550;Name=C9F09_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03550 PYKB01000316.1 Protein Homology CDS 1900 2379 . - 0 ID=cds-TGD01231.1;Parent=gene-C9F09_03550;Dbxref=NCBI_GP:TGD01231.1;Name=TGD01231.1;Note=involved in the reduction of the SoxR iron-sulfur cluster;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=C9F09_03550;product=SoxR-reducing system protein RseC;protein_id=TGD01231.1;transl_table=11 PYKB01000316.1 Genbank gene 2376 3332 . - . ID=gene-C9F09_03555;Name=C9F09_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03555 PYKB01000316.1 Protein Homology CDS 2376 3332 . - 0 ID=cds-TGD01232.1;Parent=gene-C9F09_03555;Dbxref=NCBI_GP:TGD01232.1;Name=TGD01232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457114.1;locus_tag=C9F09_03555;product=sigma-E factor regulatory protein RseB;protein_id=TGD01232.1;transl_table=11 PYKB01000316.1 Genbank gene 3332 3783 . - . ID=gene-C9F09_03560;Name=C9F09_03560;end_range=3783,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03560;partial=true PYKB01000316.1 Protein Homology CDS 3332 3783 . - 2 ID=cds-TGD01233.1;Parent=gene-C9F09_03560;Dbxref=NCBI_GP:TGD01233.1;Name=TGD01233.1;end_range=3783,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457115.1;locus_tag=C9F09_03560;partial=true;product=anti-sigma-E factor RseA;protein_id=TGD01233.1;transl_table=11 ##sequence-region PYKB01001549.1 1 3783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001549.1 Genbank region 1 3783 . + . ID=PYKB01001549.1:1..3783;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001549.1 Genbank gene 1 273 . + . ID=gene-C9F09_27035;Name=C9F09_27035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27035;partial=true;start_range=.,1 PYKB01001549.1 Protein Homology CDS 1 273 . + 0 ID=cds-TGC76025.1;Parent=gene-C9F09_27035;Dbxref=NCBI_GP:TGC76025.1;Name=TGC76025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458080.1;locus_tag=C9F09_27035;partial=true;product=permease;protein_id=TGC76025.1;start_range=.,1;transl_table=11 PYKB01001549.1 Genbank pseudogene 286 465 . + . ID=gene-C9F09_27040;Name=C9F09_27040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_27040;pseudo=true PYKB01001549.1 Protein Homology CDS 286 465 . + 0 ID=cds-C9F09_27040;Parent=gene-C9F09_27040;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575181.1;locus_tag=C9F09_27040;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001549.1 Genbank gene 593 1963 . + . ID=gene-C9F09_27045;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=C9F09_27045 PYKB01001549.1 Protein Homology CDS 593 1963 . + 0 ID=cds-TGC76026.1;Parent=gene-C9F09_27045;Dbxref=NCBI_GP:TGC76026.1;Name=TGC76026.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458081.1;locus_tag=C9F09_27045;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase;protein_id=TGC76026.1;transl_table=11 PYKB01001549.1 Genbank gene 2152 3783 . + . ID=gene-C9F09_27050;Name=glmS;end_range=3783,.;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=C9F09_27050;partial=true PYKB01001549.1 Protein Homology CDS 2152 3783 . + 0 ID=cds-TGC76027.1;Parent=gene-C9F09_27050;Dbxref=NCBI_GP:TGC76027.1;Name=TGC76027.1;end_range=3783,.;gbkey=CDS;gene=glmS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=C9F09_27050;partial=true;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=TGC76027.1;transl_table=11 ##sequence-region PYKB01001547.1 1 3780 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001547.1 Genbank region 1 3780 . + . ID=PYKB01001547.1:1..3780;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001547.1 Genbank gene 1 344 . - . ID=gene-C9F09_26995;Name=C9F09_26995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26995;partial=true;start_range=.,1 PYKB01001547.1 Protein Homology CDS 1 344 . - 0 ID=cds-TGC76037.1;Parent=gene-C9F09_26995;Dbxref=NCBI_GP:TGC76037.1;Name=TGC76037.1;Note=citrate-ACP transferase%2C the alpha subunit catalyzes the formation of (3S)-citryl-CoA from acetyl-CoA and citrate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=C9F09_26995;partial=true;product=citrate lyase subunit alpha;protein_id=TGC76037.1;start_range=.,1;transl_table=11 PYKB01001547.1 Genbank gene 354 1262 . - . ID=gene-C9F09_27000;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=C9F09_27000 PYKB01001547.1 Protein Homology CDS 354 1262 . - 0 ID=cds-TGC76038.1;Parent=gene-C9F09_27000;Dbxref=NCBI_GP:TGC76038.1;Name=TGC76038.1;gbkey=CDS;gene=citE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=C9F09_27000;product=citrate (pro-3S)-lyase subunit beta;protein_id=TGC76038.1;transl_table=11 PYKB01001547.1 Genbank gene 1259 1555 . - . ID=gene-C9F09_27005;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=C9F09_27005 PYKB01001547.1 Protein Homology CDS 1259 1555 . - 0 ID=cds-TGC76039.1;Parent=gene-C9F09_27005;Dbxref=NCBI_GP:TGC76039.1;Name=TGC76039.1;gbkey=CDS;gene=citD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455200.1;locus_tag=C9F09_27005;product=citrate lyase ACP;protein_id=TGC76039.1;transl_table=11 PYKB01001547.1 Genbank gene 1552 2628 . - . ID=gene-C9F09_27010;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=C9F09_27010 PYKB01001547.1 Protein Homology CDS 1552 2628 . - 0 ID=cds-TGC76040.1;Parent=gene-C9F09_27010;Dbxref=NCBI_GP:TGC76040.1;Name=TGC76040.1;gbkey=CDS;gene=citC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=C9F09_27010;product=[citrate (pro-3S)-lyase] ligase;protein_id=TGC76040.1;transl_table=11 PYKB01001547.1 Genbank gene 2821 3003 . + . ID=gene-C9F09_27015;Name=C9F09_27015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27015 PYKB01001547.1 Protein Homology CDS 2821 3003 . + 0 ID=cds-TGC76041.1;Parent=gene-C9F09_27015;Dbxref=NCBI_GP:TGC76041.1;Name=TGC76041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526096.1;locus_tag=C9F09_27015;product=hypothetical protein;protein_id=TGC76041.1;transl_table=11 PYKB01001547.1 Genbank gene 3013 3780 . + . ID=gene-C9F09_27020;Name=dpiB;end_range=3780,.;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;gene_synonym=citA;locus_tag=C9F09_27020;partial=true PYKB01001547.1 Protein Homology CDS 3013 3780 . + 0 ID=cds-TGC76042.1;Parent=gene-C9F09_27020;Dbxref=NCBI_GP:TGC76042.1;Name=TGC76042.1;Note=regulates the expression of citrate fermentation genes;end_range=3780,.;gbkey=CDS;gene=dpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=C9F09_27020;partial=true;product=histidine kinase;protein_id=TGC76042.1;transl_table=11 ##sequence-region PYKB01000064.1 1 3776 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000064.1 Genbank region 1 3776 . + . ID=PYKB01000064.1:1..3776;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000064.1 Genbank gene 1 270 . + . ID=gene-C9F09_00710;Name=C9F09_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00710;partial=true;start_range=.,1 PYKB01000064.1 Protein Homology CDS 1 270 . + 0 ID=cds-TGD06152.1;Parent=gene-C9F09_00710;Dbxref=NCBI_GP:TGD06152.1;Name=TGD06152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455395.1;locus_tag=C9F09_00710;partial=true;product=MFS transporter;protein_id=TGD06152.1;start_range=.,1;transl_table=11 PYKB01000064.1 Genbank gene 267 1082 . + . ID=gene-C9F09_00715;Name=C9F09_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00715 PYKB01000064.1 Protein Homology CDS 267 1082 . + 0 ID=cds-TGD06153.1;Parent=gene-C9F09_00715;Dbxref=NCBI_GP:TGD06153.1;Name=TGD06153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=C9F09_00715;product=HAD family hydrolase;protein_id=TGD06153.1;transl_table=11 PYKB01000064.1 Genbank gene 1136 2368 . - . ID=gene-C9F09_00720;Name=C9F09_00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00720 PYKB01000064.1 Protein Homology CDS 1136 2368 . - 0 ID=cds-TGD06154.1;Parent=gene-C9F09_00720;Dbxref=NCBI_GP:TGD06154.1;Name=TGD06154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455393.1;locus_tag=C9F09_00720;product=multidrug transporter MdfA;protein_id=TGD06154.1;transl_table=11 PYKB01000064.1 Genbank gene 2681 3289 . + . ID=gene-C9F09_00725;Name=C9F09_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00725 PYKB01000064.1 Protein Homology CDS 2681 3289 . + 0 ID=cds-TGD06155.1;Parent=gene-C9F09_00725;Dbxref=NCBI_GP:TGD06155.1;Name=TGD06155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=C9F09_00725;product=undecaprenyl-diphosphate phosphatase;protein_id=TGD06155.1;transl_table=11 PYKB01000064.1 Genbank pseudogene 3361 3723 . + . ID=gene-C9F09_00730;Name=C9F09_00730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00730;pseudo=true PYKB01000064.1 Protein Homology CDS 3361 3723 . + 0 ID=cds-C9F09_00730;Parent=gene-C9F09_00730;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455391.1;locus_tag=C9F09_00730;product=DNA-binding transcriptional repressor DeoR;pseudo=true;transl_table=11 ##sequence-region PYKB01001189.1 1 3767 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001189.1 Genbank region 1 3767 . + . ID=PYKB01001189.1:1..3767;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001189.1 Genbank gene 1 238 . - . ID=gene-C9F09_20225;Name=C9F09_20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20225;partial=true;start_range=.,1 PYKB01001189.1 Protein Homology CDS 1 238 . - 0 ID=cds-TGC83738.1;Parent=gene-C9F09_20225;Dbxref=NCBI_GP:TGC83738.1;Name=TGC83738.1;Note=outer membrane protease%3B involved in virulence in many organisms%3B OmpT%3B IcsP%3B SopA%3B Pla%3B PgtE%3B omptin%3B in Escherichia coli OmpT can degrade antimicrobial peptides%3B in Yersinia Pla activates plasminogen during infection%3B in Shigella flexneria SopA cleaves the autotransporter IcsA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456937.1;locus_tag=C9F09_20225;partial=true;product=outer membrane protease PgtE;protein_id=TGC83738.1;start_range=.,1;transl_table=11 PYKB01001189.1 Genbank gene 506 1753 . - . ID=gene-C9F09_20230;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=C9F09_20230 PYKB01001189.1 Protein Homology CDS 506 1753 . - 0 ID=cds-TGC83739.1;Parent=gene-C9F09_20230;Dbxref=NCBI_GP:TGC83739.1;Name=TGC83739.1;gbkey=CDS;gene=pgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=C9F09_20230;product=two-component system response regulator PgtA;protein_id=TGC83739.1;transl_table=11 PYKB01001189.1 Genbank gene 1743 3728 . - . ID=gene-C9F09_20235;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=C9F09_20235 PYKB01001189.1 Protein Homology CDS 1743 3728 . - 0 ID=cds-TGC83740.1;Parent=gene-C9F09_20235;Dbxref=NCBI_GP:TGC83740.1;Name=TGC83740.1;gbkey=CDS;gene=pgtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132947.1;locus_tag=C9F09_20235;product=two-component system sensor histidine kinase PgtB;protein_id=TGC83740.1;transl_table=11 ##sequence-region PYKB01001088.1 1 3750 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001088.1 Genbank region 1 3750 . + . ID=PYKB01001088.1:1..3750;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001088.1 Genbank gene 1 962 . + . ID=gene-C9F09_18190;Name=C9F09_18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18190;partial=true;start_range=.,1 PYKB01001088.1 Protein Homology CDS 1 962 . + 2 ID=cds-TGC86281.1;Parent=gene-C9F09_18190;Dbxref=NCBI_GP:TGC86281.1;Name=TGC86281.1;Note=catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002415132.1;locus_tag=C9F09_18190;partial=true;product=phosphomethylpyrimidine synthase ThiC;protein_id=TGC86281.1;start_range=.,1;transl_table=11 PYKB01001088.1 Genbank gene 962 1597 . + . ID=gene-C9F09_18195;Name=C9F09_18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18195 PYKB01001088.1 Protein Homology CDS 962 1597 . + 0 ID=cds-TGC86282.1;Parent=gene-C9F09_18195;Dbxref=NCBI_GP:TGC86282.1;Name=TGC86282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457911.1;locus_tag=C9F09_18195;product=thiamine phosphate synthase;protein_id=TGC86282.1;transl_table=11 PYKB01001088.1 Genbank gene 1590 2348 . + . ID=gene-C9F09_18200;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=C9F09_18200 PYKB01001088.1 Protein Homology CDS 1590 2348 . + 0 ID=cds-TGC86283.1;Parent=gene-C9F09_18200;Dbxref=NCBI_GP:TGC86283.1;Name=TGC86283.1;gbkey=CDS;gene=thiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457912.1;locus_tag=C9F09_18200;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=TGC86283.1;transl_table=11 PYKB01001088.1 Genbank gene 2329 2529 . + . ID=gene-C9F09_18205;Name=C9F09_18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18205 PYKB01001088.1 Protein Homology CDS 2329 2529 . + 0 ID=cds-TGC86284.1;Parent=gene-C9F09_18205;Dbxref=NCBI_GP:TGC86284.1;Name=TGC86284.1;Note=with ThiF%2C ThiG%2C and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=C9F09_18205;product=sulfur carrier protein ThiS;protein_id=TGC86284.1;transl_table=11 PYKB01001088.1 Genbank gene 2531 3301 . + . ID=gene-C9F09_18210;Name=C9F09_18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18210 PYKB01001088.1 Protein Homology CDS 2531 3301 . + 0 ID=cds-TGC86285.1;Parent=gene-C9F09_18210;Dbxref=NCBI_GP:TGC86285.1;Name=TGC86285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457914.1;locus_tag=C9F09_18210;product=thiazole synthase;protein_id=TGC86285.1;transl_table=11 PYKB01001088.1 Genbank gene 3298 3750 . + . ID=gene-C9F09_18215;Name=thiH;end_range=3750,.;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=C9F09_18215;partial=true PYKB01001088.1 Protein Homology CDS 3298 3750 . + 0 ID=cds-TGC86286.1;Parent=gene-C9F09_18215;Dbxref=NCBI_GP:TGC86286.1;Name=TGC86286.1;Note=in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center;end_range=3750,.;gbkey=CDS;gene=thiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=C9F09_18215;partial=true;product=2-iminoacetate synthase ThiH;protein_id=TGC86286.1;transl_table=11 ##sequence-region PYKB01000971.1 1 3750 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000971.1 Genbank region 1 3750 . + . ID=PYKB01000971.1:1..3750;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000971.1 Genbank gene 1 2440 . + . ID=gene-C9F09_16060;Name=C9F09_16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16060;partial=true;start_range=.,1 PYKB01000971.1 Protein Homology CDS 1 2440 . + 1 ID=cds-TGC88875.1;Parent=gene-C9F09_16060;Dbxref=NCBI_GP:TGC88875.1;Name=TGC88875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=C9F09_16060;partial=true;product=HTH-type transcriptional regulator MalT;protein_id=TGC88875.1;start_range=.,1;transl_table=11 PYKB01000971.1 Genbank gene 2582 3142 . - . ID=gene-C9F09_16065;Name=C9F09_16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16065 PYKB01000971.1 Protein Homology CDS 2582 3142 . - 0 ID=cds-TGC88876.1;Parent=gene-C9F09_16065;Dbxref=NCBI_GP:TGC88876.1;Name=TGC88876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001650910.1;locus_tag=C9F09_16065;product=hypothetical protein;protein_id=TGC88876.1;transl_table=11 PYKB01000971.1 Genbank gene 3139 3750 . - . ID=gene-C9F09_16070;Name=C9F09_16070;end_range=3750,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16070;partial=true PYKB01000971.1 Protein Homology CDS 3139 3750 . - 0 ID=cds-TGC88877.1;Parent=gene-C9F09_16070;Dbxref=NCBI_GP:TGC88877.1;Name=TGC88877.1;Note=catalyzes the conversion of terminal3'-phosphate of RNA to the 2'%2C3'-cyclicphosphodiester;end_range=3750,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101029.1;locus_tag=C9F09_16070;partial=true;product=RNA 3'-terminal phosphate cyclase;protein_id=TGC88877.1;transl_table=11 ##sequence-region PYKB01000565.1 1 11245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000565.1 Genbank region 1 11245 . + . ID=PYKB01000565.1:1..11245;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000565.1 Genbank gene 217 840 . - . ID=gene-C9F09_07925;Name=C9F09_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07925 PYKB01000565.1 Protein Homology CDS 217 840 . - 0 ID=cds-TGC96143.1;Parent=gene-C9F09_07925;Dbxref=NCBI_GP:TGC96143.1;Name=TGC96143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458070.1;locus_tag=C9F09_07925;product=ribosomal RNA small subunit methyltransferase G;protein_id=TGC96143.1;transl_table=11 PYKB01000565.1 Genbank gene 943 2832 . - . ID=gene-C9F09_07930;Name=C9F09_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07930 PYKB01000565.1 Protein Homology CDS 943 2832 . - 0 ID=cds-TGC96136.1;Parent=gene-C9F09_07930;Dbxref=NCBI_GP:TGC96136.1;Name=TGC96136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=C9F09_07930;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=TGC96136.1;transl_table=11 PYKB01000565.1 Genbank pseudogene 3001 3222 . + . ID=gene-C9F09_07935;Name=C9F09_07935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07935;pseudo=true PYKB01000565.1 Protein Homology CDS 3001 3222 . + 0 ID=cds-C9F09_07935;Parent=gene-C9F09_07935;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017095241.1;locus_tag=C9F09_07935;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000565.1 Genbank gene 3211 3654 . - . ID=gene-C9F09_07940;Name=C9F09_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07940 PYKB01000565.1 Protein Homology CDS 3211 3654 . - 0 ID=cds-TGC96144.1;Parent=gene-C9F09_07940;Dbxref=NCBI_GP:TGC96144.1;Name=TGC96144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458068.1;locus_tag=C9F09_07940;product=FMN-binding protein MioC;protein_id=TGC96144.1;transl_table=11 PYKB01000565.1 Genbank gene 3744 4202 . - . ID=gene-C9F09_07945;Name=C9F09_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07945 PYKB01000565.1 Protein Homology CDS 3744 4202 . - 0 ID=cds-TGC96137.1;Parent=gene-C9F09_07945;Dbxref=NCBI_GP:TGC96137.1;Name=TGC96137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=C9F09_07945;product=transcriptional regulator AsnC;protein_id=TGC96137.1;transl_table=11 PYKB01000565.1 Genbank gene 4353 5345 . + . ID=gene-C9F09_07950;Name=C9F09_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07950 PYKB01000565.1 Protein Homology CDS 4353 5345 . + 0 ID=cds-TGC96138.1;Parent=gene-C9F09_07950;Dbxref=NCBI_GP:TGC96138.1;Name=TGC96138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=C9F09_07950;product=asparagine synthetase A;protein_id=TGC96138.1;transl_table=11 PYKB01000565.1 Genbank gene 5350 6801 . - . ID=gene-C9F09_07955;Name=C9F09_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07955 PYKB01000565.1 Protein Homology CDS 5350 6801 . - 0 ID=cds-TGC96139.1;Parent=gene-C9F09_07955;Dbxref=NCBI_GP:TGC96139.1;Name=TGC96139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458065.1;locus_tag=C9F09_07955;product=ATPase RavA stimulator ViaA;protein_id=TGC96139.1;transl_table=11 PYKB01000565.1 Genbank gene 6795 8291 . - . ID=gene-C9F09_07960;Name=C9F09_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07960 PYKB01000565.1 Protein Homology CDS 6795 8291 . - 0 ID=cds-TGC96140.1;Parent=gene-C9F09_07960;Dbxref=NCBI_GP:TGC96140.1;Name=TGC96140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=C9F09_07960;product=ATPase RavA;protein_id=TGC96140.1;transl_table=11 PYKB01000565.1 Genbank gene 8639 10507 . + . ID=gene-C9F09_07965;Name=trkD;gbkey=Gene;gene=trkD;gene_biotype=protein_coding;locus_tag=C9F09_07965 PYKB01000565.1 Protein Homology CDS 8639 10507 . + 0 ID=cds-TGC96141.1;Parent=gene-C9F09_07965;Dbxref=NCBI_GP:TGC96141.1;Name=TGC96141.1;Note=Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH;gbkey=CDS;gene=trkD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=C9F09_07965;product=low affinity potassium transport system protein kup;protein_id=TGC96141.1;transl_table=11 PYKB01000565.1 Genbank gene 10724 11143 . + . ID=gene-C9F09_07970;Name=C9F09_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07970 PYKB01000565.1 Protein Homology CDS 10724 11143 . + 0 ID=cds-TGC96142.1;Parent=gene-C9F09_07970;Dbxref=NCBI_GP:TGC96142.1;Name=TGC96142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=C9F09_07970;product=D-ribose pyranase;protein_id=TGC96142.1;transl_table=11 ##sequence-region PYKB01001625.1 1 3747 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001625.1 Genbank region 1 3747 . + . ID=PYKB01001625.1:1..3747;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001625.1 Genbank gene 1 376 . - . ID=gene-C9F09_28435;Name=C9F09_28435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28435;partial=true;start_range=.,1 PYKB01001625.1 Protein Homology CDS 1 376 . - 0 ID=cds-TGC74112.1;Parent=gene-C9F09_28435;Dbxref=NCBI_GP:TGC74112.1;Name=TGC74112.1;Note=invasion protein InvC%3B necessary for efficient entry of S.typhimurium into cultured epithelial cells%3B probable catalytic subunit of a protein translocase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457288.1;locus_tag=C9F09_28435;partial=true;product=EscN/YscN/HrcN family type III secretion system ATPase;protein_id=TGC74112.1;start_range=.,1;transl_table=11 PYKB01001625.1 Genbank gene 373 780 . - . ID=gene-C9F09_28440;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=C9F09_28440 PYKB01001625.1 Protein Homology CDS 373 780 . - 0 ID=cds-TGC74113.1;Parent=gene-C9F09_28440;Dbxref=NCBI_GP:TGC74113.1;Name=TGC74113.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457289.1;locus_tag=C9F09_28440;product=SPI-1 type III secretion system chaperone SpaK;protein_id=TGC74113.1;transl_table=11 PYKB01001625.1 Genbank gene 804 2861 . - . ID=gene-C9F09_28445;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=C9F09_28445 PYKB01001625.1 Protein Homology CDS 804 2861 . - 0 ID=cds-TGC74114.1;Parent=gene-C9F09_28445;Dbxref=NCBI_GP:TGC74114.1;Name=TGC74114.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457290.1;locus_tag=C9F09_28445;product=type III secretion system export apparatus protein InvA;protein_id=TGC74114.1;transl_table=11 PYKB01001625.1 Genbank gene 2886 3747 . - . ID=gene-C9F09_28450;Name=invE;end_range=3747,.;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=C9F09_28450;partial=true PYKB01001625.1 Protein Homology CDS 2886 3747 . - 1 ID=cds-TGC74115.1;Parent=gene-C9F09_28450;Dbxref=NCBI_GP:TGC74115.1;Name=TGC74115.1;end_range=3747,.;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457291.1;locus_tag=C9F09_28450;partial=true;product=type III secretion system gatekeeper InvE;protein_id=TGC74115.1;transl_table=11 ##sequence-region PYKB01001048.1 1 3730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001048.1 Genbank region 1 3730 . + . ID=PYKB01001048.1:1..3730;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001048.1 Genbank gene 1 605 . - . ID=gene-C9F09_17620;Name=C9F09_17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17620;partial=true;start_range=.,1 PYKB01001048.1 Protein Homology CDS 1 605 . - 0 ID=cds-TGC87135.1;Parent=gene-C9F09_17620;Dbxref=NCBI_GP:TGC87135.1;Name=TGC87135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=C9F09_17620;partial=true;product=hypothetical protein;protein_id=TGC87135.1;start_range=.,1;transl_table=11 PYKB01001048.1 Genbank gene 654 1472 . - . ID=gene-C9F09_17625;Name=C9F09_17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17625 PYKB01001048.1 Protein Homology CDS 654 1472 . - 0 ID=cds-TGC87136.1;Parent=gene-C9F09_17625;Dbxref=NCBI_GP:TGC87136.1;Name=TGC87136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=C9F09_17625;product=shikimate 5-dehydrogenase;protein_id=TGC87136.1;transl_table=11 PYKB01001048.1 Genbank gene 1567 3324 . + . ID=gene-C9F09_17630;Name=C9F09_17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17630 PYKB01001048.1 Protein Homology CDS 1567 3324 . + 0 ID=cds-TGC87137.1;Parent=gene-C9F09_17630;Dbxref=NCBI_GP:TGC87137.1;Name=TGC87137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=C9F09_17630;product=SgrR family transcriptional regulator;protein_id=TGC87137.1;transl_table=11 PYKB01001048.1 Genbank gene 3475 3730 . - . ID=gene-C9F09_17635;Name=C9F09_17635;end_range=3730,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17635;partial=true PYKB01001048.1 Protein Homology CDS 3475 3730 . - 1 ID=cds-TGC87138.1;Parent=gene-C9F09_17635;Dbxref=NCBI_GP:TGC87138.1;Name=TGC87138.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;end_range=3730,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=C9F09_17635;partial=true;product=glutamine--fructose-6-phosphate aminotransferase;protein_id=TGC87138.1;transl_table=11 ##sequence-region PYKB01001545.1 1 3725 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001545.1 Genbank region 1 3725 . + . ID=PYKB01001545.1:1..3725;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001545.1 Genbank gene 1 234 . + . ID=gene-C9F09_26960;Name=C9F09_26960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26960;partial=true;start_range=.,1 PYKB01001545.1 Protein Homology CDS 1 234 . + 0 ID=cds-TGC76150.1;Parent=gene-C9F09_26960;Dbxref=NCBI_GP:TGC76150.1;Name=TGC76150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455687.1;locus_tag=C9F09_26960;partial=true;product=malonyl CoA-acyl carrier protein transacylase;protein_id=TGC76150.1;start_range=.,1;transl_table=11 PYKB01001545.1 Genbank gene 247 981 . + . ID=gene-C9F09_26965;Name=C9F09_26965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26965 PYKB01001545.1 Protein Homology CDS 247 981 . + 0 ID=cds-TGC76151.1;Parent=gene-C9F09_26965;Dbxref=NCBI_GP:TGC76151.1;Name=TGC76151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=C9F09_26965;product=3-oxoacyl-ACP reductase FabG;protein_id=TGC76151.1;transl_table=11 PYKB01001545.1 Genbank gene 1137 1373 . + . ID=gene-C9F09_26970;Name=C9F09_26970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26970 PYKB01001545.1 Protein Homology CDS 1137 1373 . + 0 ID=cds-TGC76152.1;Parent=gene-C9F09_26970;Dbxref=NCBI_GP:TGC76152.1;Name=TGC76152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309499.1;locus_tag=C9F09_26970;product=acyl carrier protein;protein_id=TGC76152.1;transl_table=11 PYKB01001545.1 Genbank gene 1459 2700 . + . ID=gene-C9F09_26975;Name=C9F09_26975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26975 PYKB01001545.1 Protein Homology CDS 1459 2700 . + 0 ID=cds-TGC76153.1;Parent=gene-C9F09_26975;Dbxref=NCBI_GP:TGC76153.1;Name=TGC76153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129014.1;locus_tag=C9F09_26975;product=beta-ketoacyl-ACP synthase II;protein_id=TGC76153.1;transl_table=11 PYKB01001545.1 Genbank gene 2824 3633 . + . ID=gene-C9F09_26980;Name=C9F09_26980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26980 PYKB01001545.1 Protein Homology CDS 2824 3633 . + 0 ID=cds-TGC76154.1;Parent=gene-C9F09_26980;Dbxref=NCBI_GP:TGC76154.1;Name=TGC76154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455691.1;locus_tag=C9F09_26980;product=aminodeoxychorismate lyase;protein_id=TGC76154.1;transl_table=11 ##sequence-region PYKB01000315.1 1 3723 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000315.1 Genbank region 1 3723 . + . ID=PYKB01000315.1:1..3723;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000315.1 Genbank gene 1 992 . - . ID=gene-C9F09_03525;Name=C9F09_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03525;partial=true;start_range=.,1 PYKB01000315.1 Protein Homology CDS 1 992 . - 0 ID=cds-TGD01247.1;Parent=gene-C9F09_03525;Dbxref=NCBI_GP:TGD01247.1;Name=TGD01247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458955.1;locus_tag=C9F09_03525;partial=true;product=carbon starvation protein A;protein_id=TGD01247.1;start_range=.,1;transl_table=11 PYKB01000315.1 Genbank gene 1359 3020 . + . ID=gene-C9F09_03530;Name=C9F09_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03530 PYKB01000315.1 Protein Homology CDS 1359 3020 . + 0 ID=cds-TGD01248.1;Parent=gene-C9F09_03530;Dbxref=NCBI_GP:TGD01248.1;Name=TGD01248.1;Note=serine sensor receptor;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=C9F09_03530;product=methyl-accepting chemotaxis protein;protein_id=TGD01248.1;transl_table=11 PYKB01000315.1 Genbank gene 3344 3723 . + . ID=gene-C9F09_03535;Name=C9F09_03535;end_range=3723,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03535;partial=true PYKB01000315.1 Protein Homology CDS 3344 3723 . + 0 ID=cds-TGD01249.1;Parent=gene-C9F09_03535;Dbxref=NCBI_GP:TGD01249.1;Name=TGD01249.1;end_range=3723,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=C9F09_03535;partial=true;product=Fis family transcriptional regulator;protein_id=TGD01249.1;transl_table=11 ##sequence-region PYKB01000281.1 1 3723 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000281.1 Genbank region 1 3723 . + . ID=PYKB01000281.1:1..3723;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000281.1 Genbank gene 1 88 . + . ID=gene-C9F09_03210;Name=C9F09_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03210;partial=true;start_range=.,1 PYKB01000281.1 Protein Homology CDS 1 88 . + 1 ID=cds-TGD01756.1;Parent=gene-C9F09_03210;Dbxref=NCBI_GP:TGD01756.1;Name=TGD01756.1;Note=positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455043.1;locus_tag=C9F09_03210;partial=true;product=BolA family transcriptional regulator;protein_id=TGD01756.1;start_range=.,1;transl_table=11 PYKB01000281.1 Genbank pseudogene 99 287 . + . ID=gene-C9F09_03215;Name=C9F09_03215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03215;pseudo=true PYKB01000281.1 Protein Homology CDS 99 287 . + 0 ID=cds-C9F09_03215;Parent=gene-C9F09_03215;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001177119.1;locus_tag=C9F09_03215;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000281.1 Genbank gene 435 1733 . + . ID=gene-C9F09_03220;Name=C9F09_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03220 PYKB01000281.1 Protein Homology CDS 435 1733 . + 0 ID=cds-TGD01757.1;Parent=gene-C9F09_03220;Dbxref=NCBI_GP:TGD01757.1;Name=TGD01757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=C9F09_03220;product=trigger factor;protein_id=TGD01757.1;transl_table=11 PYKB01000281.1 Genbank gene 1980 2603 . + . ID=gene-C9F09_03225;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=C9F09_03225 PYKB01000281.1 Protein Homology CDS 1980 2603 . + 0 ID=cds-TGD01758.1;Parent=gene-C9F09_03225;Dbxref=NCBI_GP:TGD01758.1;Name=TGD01758.1;gbkey=CDS;gene=clpP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455045.1;locus_tag=C9F09_03225;product=ATP-dependent Clp protease proteolytic subunit;protein_id=TGD01758.1;transl_table=11 PYKB01000281.1 Genbank gene 2855 3723 . + . ID=gene-C9F09_03230;Name=clpX;end_range=3723,.;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=C9F09_03230;partial=true PYKB01000281.1 Protein Homology CDS 2855 3723 . + 0 ID=cds-TGD01759.1;Parent=gene-C9F09_03230;Dbxref=NCBI_GP:TGD01759.1;Name=TGD01759.1;Note=binds and unfolds substrates as part of the ClpXP protease;end_range=3723,.;gbkey=CDS;gene=clpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=C9F09_03230;partial=true;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=TGD01759.1;transl_table=11 ##sequence-region PYKB01000900.1 1 3723 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000900.1 Genbank region 1 3723 . + . ID=PYKB01000900.1:1..3723;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000900.1 Genbank gene 1 417 . - . ID=gene-C9F09_14815;Name=C9F09_14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14815;partial=true;start_range=.,1 PYKB01000900.1 Protein Homology CDS 1 417 . - 0 ID=cds-TGC90176.1;Parent=gene-C9F09_14815;Dbxref=NCBI_GP:TGC90176.1;Name=TGC90176.1;Note=molecular chaperone;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=C9F09_14815;partial=true;product=molecular chaperone HtpG;protein_id=TGC90176.1;start_range=.,1;transl_table=11 PYKB01000900.1 Genbank gene 528 1133 . - . ID=gene-C9F09_14820;Name=C9F09_14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14820 PYKB01000900.1 Protein Homology CDS 528 1133 . - 0 ID=cds-TGC90177.1;Parent=gene-C9F09_14820;Dbxref=NCBI_GP:TGC90177.1;Name=TGC90177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455082.1;locus_tag=C9F09_14820;product=recombination protein RecR;protein_id=TGC90177.1;transl_table=11 PYKB01000900.1 Genbank gene 1133 1462 . - . ID=gene-C9F09_14825;Name=C9F09_14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14825 PYKB01000900.1 Protein Homology CDS 1133 1462 . - 0 ID=cds-TGC90178.1;Parent=gene-C9F09_14825;Dbxref=NCBI_GP:TGC90178.1;Name=TGC90178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=C9F09_14825;product=YbaB/EbfC family nucleoid-associated protein;protein_id=TGC90178.1;transl_table=11 PYKB01000900.1 Genbank gene 1508 3436 . - . ID=gene-C9F09_14830;Name=C9F09_14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14830 PYKB01000900.1 Protein Homology CDS 1508 3436 . - 0 ID=cds-TGC90179.1;Parent=gene-C9F09_14830;Dbxref=NCBI_GP:TGC90179.1;Name=TGC90179.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455080.1;locus_tag=C9F09_14830;product=DNA polymerase III subunit gamma/tau;protein_id=TGC90179.1;transl_table=11 ##sequence-region PYKB01001572.1 1 3722 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001572.1 Genbank region 1 3722 . + . ID=PYKB01001572.1:1..3722;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001572.1 Genbank gene 1 444 . - . ID=gene-C9F09_27450;Name=C9F09_27450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27450;partial=true;start_range=.,1 PYKB01001572.1 Protein Homology CDS 1 444 . - 0 ID=cds-TGC75523.1;Parent=gene-C9F09_27450;Dbxref=NCBI_GP:TGC75523.1;Name=TGC75523.1;Note=involved in drug resistance;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=C9F09_27450;partial=true;product=NADPH quinone reductase MdaB;protein_id=TGC75523.1;start_range=.,1;transl_table=11 PYKB01001572.1 Genbank pseudogene 551 1900 . - . ID=gene-C9F09_27455;Name=C9F09_27455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_27455;pseudo=true PYKB01001572.1 Protein Homology CDS 551 1900 . - 0 ID=cds-C9F09_27455;Parent=gene-C9F09_27455;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=C9F09_27455;product=two-component system sensor histidine kinase QseC;pseudo=true;transl_table=11 PYKB01001572.1 Genbank gene 1897 2556 . - . ID=gene-C9F09_27460;Name=C9F09_27460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27460 PYKB01001572.1 Protein Homology CDS 1897 2556 . - 0 ID=cds-TGC75524.1;Parent=gene-C9F09_27460;Dbxref=NCBI_GP:TGC75524.1;Name=TGC75524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457570.1;locus_tag=C9F09_27460;product=two-component system response regulator QseB;protein_id=TGC75524.1;transl_table=11 PYKB01001572.1 Genbank gene 2712 3104 . + . ID=gene-C9F09_27465;Name=C9F09_27465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27465 PYKB01001572.1 Protein Homology CDS 2712 3104 . + 0 ID=cds-TGC75525.1;Parent=gene-C9F09_27465;Dbxref=NCBI_GP:TGC75525.1;Name=TGC75525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457569.1;locus_tag=C9F09_27465;product=TIGR00156 family protein;protein_id=TGC75525.1;transl_table=11 PYKB01001572.1 Genbank gene 3176 3722 . + . ID=gene-C9F09_27470;Name=C9F09_27470;end_range=3722,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27470;partial=true PYKB01001572.1 Protein Homology CDS 3176 3722 . + 0 ID=cds-TGC75526.1;Parent=gene-C9F09_27470;Dbxref=NCBI_GP:TGC75526.1;Name=TGC75526.1;end_range=3722,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=C9F09_27470;partial=true;product=AraC family transcriptional regulator;protein_id=TGC75526.1;transl_table=11 ##sequence-region PYKB01000526.1 1 3716 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000526.1 Genbank region 1 3716 . + . ID=PYKB01000526.1:1..3716;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000526.1 Genbank pseudogene 69 1655 . - . ID=gene-C9F09_07070;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=pseudogene;locus_tag=C9F09_07070;pseudo=true PYKB01000526.1 Protein Homology CDS 69 1655 . - 0 ID=cds-C9F09_07070;Parent=gene-C9F09_07070;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=prfC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=C9F09_07070;product=peptide chain release factor 3;pseudo=true;transl_table=11 PYKB01000526.1 Genbank gene 1747 2424 . - . ID=gene-C9F09_07075;Name=C9F09_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07075 PYKB01000526.1 Protein Homology CDS 1747 2424 . - 0 ID=cds-TGC97041.1;Parent=gene-C9F09_07075;Dbxref=NCBI_GP:TGC97041.1;Name=TGC97041.1;Note=manganese-dependent 5'-nucleotidase%3B specific for 5'-UMP%2C 5'-dUMP%2C and 5'-dTMP%3B member of haloacid dehalogenase (HAD)-like hydrolase superfamily;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=C9F09_07075;product=dUMP phosphatase;protein_id=TGC97041.1;transl_table=11 PYKB01000526.1 Genbank gene 2446 2892 . - . ID=gene-C9F09_07080;Name=C9F09_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07080 PYKB01000526.1 Protein Homology CDS 2446 2892 . - 0 ID=cds-TGC97042.1;Parent=gene-C9F09_07080;Dbxref=NCBI_GP:TGC97042.1;Name=TGC97042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458970.1;locus_tag=C9F09_07080;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=TGC97042.1;transl_table=11 PYKB01000526.1 Genbank gene 2837 3274 . - . ID=gene-C9F09_07085;Name=C9F09_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07085 PYKB01000526.1 Protein Homology CDS 2837 3274 . - 0 ID=cds-TGC97043.1;Parent=gene-C9F09_07085;Dbxref=NCBI_GP:TGC97043.1;Name=TGC97043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=C9F09_07085;product=DNA polymerase III subunit psi;protein_id=TGC97043.1;transl_table=11 PYKB01000526.1 Genbank gene 3377 3716 . + . ID=gene-C9F09_07090;Name=rsmC;end_range=3716,.;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=C9F09_07090;partial=true PYKB01000526.1 Protein Homology CDS 3377 3716 . + 0 ID=cds-TGC97044.1;Parent=gene-C9F09_07090;Dbxref=NCBI_GP:TGC97044.1;Name=TGC97044.1;Note=16S rRNA M2G1207 methyltransferase%3B one of many enzymes that modify bases of the ribosomal RNA%3B this enzyme methylates the G at position 1207 of the small ribosomal subunit;end_range=3716,.;gbkey=CDS;gene=rsmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=C9F09_07090;partial=true;product=16S rRNA (guanine(1207)-N(2))-methyltransferase;protein_id=TGC97044.1;transl_table=11 ##sequence-region PYKB01000440.1 1 3705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000440.1 Genbank region 1 3705 . + . ID=PYKB01000440.1:1..3705;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000440.1 Genbank gene 4 561 . + . ID=gene-C9F09_05390;Name=C9F09_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05390 PYKB01000440.1 Protein Homology CDS 4 561 . + 0 ID=cds-TGC98810.1;Parent=gene-C9F09_05390;Dbxref=NCBI_GP:TGC98810.1;Name=TGC98810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014411405.1;locus_tag=C9F09_05390;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=TGC98810.1;transl_table=11 PYKB01000440.1 Genbank gene 558 1412 . + . ID=gene-C9F09_05395;Name=C9F09_05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05395 PYKB01000440.1 Protein Homology CDS 558 1412 . + 0 ID=cds-TGC98811.1;Parent=gene-C9F09_05395;Dbxref=NCBI_GP:TGC98811.1;Name=TGC98811.1;Note=involved in regulation of beta-lactamase%3B putative signaling protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=C9F09_05395;product=regulatory signaling modulator protein AmpE;protein_id=TGC98811.1;transl_table=11 PYKB01000440.1 Genbank gene 1504 2454 . - . ID=gene-C9F09_05400;Name=C9F09_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05400 PYKB01000440.1 Protein Homology CDS 1504 2454 . - 0 ID=cds-TGC98812.1;Parent=gene-C9F09_05400;Dbxref=NCBI_GP:TGC98812.1;Name=TGC98812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=C9F09_05400;product=alpha-N-arabinofuranosidase;protein_id=TGC98812.1;transl_table=11 PYKB01000440.1 Genbank pseudogene 2454 3705 . - . ID=gene-C9F09_05405;Name=C9F09_05405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05405;pseudo=true PYKB01000440.1 Protein Homology CDS 2454 3705 . - 1 ID=cds-C9F09_05405;Parent=gene-C9F09_05405;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=C9F09_05405;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKB01000517.1 1 3702 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000517.1 Genbank region 1 3702 . + . ID=PYKB01000517.1:1..3702;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000517.1 Genbank gene 1 3702 . + . ID=gene-C9F09_06935;Name=bapA;end_range=3702,.;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=C9F09_06935;partial=true;start_range=.,1 PYKB01000517.1 Protein Homology CDS 1 3702 . + 1 ID=cds-TGC97184.1;Parent=gene-C9F09_06935;Dbxref=NCBI_GP:TGC97184.1;Name=TGC97184.1;end_range=3702,.;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=C9F09_06935;partial=true;product=biofilm-associated protein BapA;protein_id=TGC97184.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001437.1 1 11217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001437.1 Genbank region 1 11217 . + . ID=PYKB01001437.1:1..11217;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001437.1 Genbank gene 1 1100 . + . ID=gene-C9F09_24755;Name=C9F09_24755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24755;partial=true;start_range=.,1 PYKB01001437.1 Protein Homology CDS 1 1100 . + 2 ID=cds-TGC78619.1;Parent=gene-C9F09_24755;Dbxref=NCBI_GP:TGC78619.1;Name=TGC78619.1;Note=regulates the expression of formate dehydrogenase H and hydrogenase-3 structural genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=C9F09_24755;partial=true;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=TGC78619.1;start_range=.,1;transl_table=11 PYKB01001437.1 Genbank gene 1162 1506 . - . ID=gene-C9F09_24760;Name=C9F09_24760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24760 PYKB01001437.1 Protein Homology CDS 1162 1506 . - 0 ID=cds-TGC78620.1;Parent=gene-C9F09_24760;Dbxref=NCBI_GP:TGC78620.1;Name=TGC78620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457254.1;locus_tag=C9F09_24760;product=nitrous oxide-stimulated promoter family protein;protein_id=TGC78620.1;transl_table=11 PYKB01001437.1 Genbank gene 1688 2605 . + . ID=gene-C9F09_24765;Name=C9F09_24765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24765 PYKB01001437.1 Protein Homology CDS 1688 2605 . + 0 ID=cds-TGC78621.1;Parent=gene-C9F09_24765;Dbxref=NCBI_GP:TGC78621.1;Name=TGC78621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457255.1;locus_tag=C9F09_24765;product=iron ABC transporter substrate-binding protein;protein_id=TGC78621.1;transl_table=11 PYKB01001437.1 Genbank gene 2602 3423 . + . ID=gene-C9F09_24770;Name=C9F09_24770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24770 PYKB01001437.1 Protein Homology CDS 2602 3423 . + 0 ID=cds-TGC78622.1;Parent=gene-C9F09_24770;Dbxref=NCBI_GP:TGC78622.1;Name=TGC78622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=C9F09_24770;product=manganese/iron ABC transporter ATP-binding protein;protein_id=TGC78622.1;transl_table=11 PYKB01001437.1 Genbank pseudogene 3420 4279 . + . ID=gene-C9F09_24775;Name=C9F09_24775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_24775;pseudo=true PYKB01001437.1 Protein Homology CDS 3420 4279 . + 0 ID=cds-C9F09_24775;Parent=gene-C9F09_24775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=C9F09_24775;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001437.1 Genbank gene 4270 5118 . + . ID=gene-C9F09_24780;Name=C9F09_24780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24780 PYKB01001437.1 Protein Homology CDS 4270 5118 . + 0 ID=cds-TGC78623.1;Parent=gene-C9F09_24780;Dbxref=NCBI_GP:TGC78623.1;Name=TGC78623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=C9F09_24780;product=iron ABC transporter permease;protein_id=TGC78623.1;transl_table=11 PYKB01001437.1 Genbank gene 5090 5299 . + . ID=gene-C9F09_24785;Name=C9F09_24785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24785 PYKB01001437.1 Protein Homology CDS 5090 5299 . + 0 ID=cds-TGC78624.1;Parent=gene-C9F09_24785;Dbxref=NCBI_GP:TGC78624.1;Name=TGC78624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233160.1;locus_tag=C9F09_24785;product=hypothetical protein;protein_id=TGC78624.1;transl_table=11 PYKB01001437.1 Genbank gene 5398 6153 . - . ID=gene-C9F09_24790;Name=C9F09_24790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24790 PYKB01001437.1 Protein Homology CDS 5398 6153 . - 0 ID=cds-TGC78625.1;Parent=gene-C9F09_24790;Dbxref=NCBI_GP:TGC78625.1;Name=TGC78625.1;Note=activates Salmonella pathogenicity island 4 genes and weakly represses Salmonella pathogenicity island 1 genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457260.1;locus_tag=C9F09_24790;product=transcriptional regulator;protein_id=TGC78625.1;transl_table=11 PYKB01001437.1 Genbank gene 6322 6513 . + . ID=gene-C9F09_24795;Name=C9F09_24795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24795 PYKB01001437.1 Protein Homology CDS 6322 6513 . + 0 ID=cds-TGC78626.1;Parent=gene-C9F09_24795;Dbxref=NCBI_GP:TGC78626.1;Name=TGC78626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219165.1;locus_tag=C9F09_24795;product=hypothetical protein;protein_id=TGC78626.1;transl_table=11 PYKB01001437.1 Genbank gene 6538 7425 . - . ID=gene-C9F09_24800;Name=C9F09_24800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24800 PYKB01001437.1 Protein Homology CDS 6538 7425 . - 0 ID=cds-TGC78627.1;Parent=gene-C9F09_24800;Dbxref=NCBI_GP:TGC78627.1;Name=TGC78627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457261.1;locus_tag=C9F09_24800;product=transcriptional regulator;protein_id=TGC78627.1;transl_table=11 PYKB01001437.1 Genbank gene 7770 8222 . - . ID=gene-C9F09_24805;Name=C9F09_24805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24805 PYKB01001437.1 Protein Homology CDS 7770 8222 . - 0 ID=cds-TGC78628.1;Parent=gene-C9F09_24805;Dbxref=NCBI_GP:TGC78628.1;Name=TGC78628.1;Note=expressed during and after host cell invasion;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457262.1;locus_tag=C9F09_24805;product=type III secretion system effector protein OrgC;protein_id=TGC78628.1;transl_table=11 PYKB01001437.1 Genbank gene 8219 8899 . - . ID=gene-C9F09_24810;Name=C9F09_24810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24810 PYKB01001437.1 Protein Homology CDS 8219 8899 . - 0 ID=cds-TGC78629.1;Parent=gene-C9F09_24810;Dbxref=NCBI_GP:TGC78629.1;Name=TGC78629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461790.1;locus_tag=C9F09_24810;product=oxygen-regulated invasion protein OrgB;protein_id=TGC78629.1;transl_table=11 PYKB01001437.1 Genbank gene 8856 9455 . - . ID=gene-C9F09_24815;Name=C9F09_24815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24815 PYKB01001437.1 Protein Homology CDS 8856 9455 . - 0 ID=cds-TGC78630.1;Parent=gene-C9F09_24815;Dbxref=NCBI_GP:TGC78630.1;Name=TGC78630.1;Note=oxygen regulated%3B required for internalization into the host cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=C9F09_24815;product=oxygen-regulated invasion protein OrgA;protein_id=TGC78630.1;transl_table=11 PYKB01001437.1 Genbank gene 9427 10185 . - . ID=gene-C9F09_24820;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=C9F09_24820 PYKB01001437.1 Protein Homology CDS 9427 10185 . - 0 ID=cds-TGC78631.1;Parent=gene-C9F09_24820;Dbxref=NCBI_GP:TGC78631.1;Name=TGC78631.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=C9F09_24820;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=TGC78631.1;transl_table=11 PYKB01001437.1 Genbank gene 10182 10487 . - . ID=gene-C9F09_24825;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=C9F09_24825 PYKB01001437.1 Protein Homology CDS 10182 10487 . - 0 ID=cds-TGC78632.1;Parent=gene-C9F09_24825;Dbxref=NCBI_GP:TGC78632.1;Name=TGC78632.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=C9F09_24825;product=type III secretion system inner rod protein PrgJ;protein_id=TGC78632.1;transl_table=11 PYKB01001437.1 Genbank gene 10506 10748 . - . ID=gene-C9F09_24830;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=C9F09_24830 PYKB01001437.1 Protein Homology CDS 10506 10748 . - 0 ID=cds-TGC78633.1;Parent=gene-C9F09_24830;Dbxref=NCBI_GP:TGC78633.1;Name=TGC78633.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=C9F09_24830;product=type III secretion system needle complex protein PrgI;protein_id=TGC78633.1;transl_table=11 PYKB01001437.1 Genbank gene 10773 11217 . - . ID=gene-C9F09_24835;Name=prgH;end_range=11217,.;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=C9F09_24835;partial=true PYKB01001437.1 Protein Homology CDS 10773 11217 . - 1 ID=cds-TGC78634.1;Parent=gene-C9F09_24835;Dbxref=NCBI_GP:TGC78634.1;Name=TGC78634.1;end_range=11217,.;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=C9F09_24835;partial=true;product=type III secretion system inner membrane ring protein PrgH;protein_id=TGC78634.1;transl_table=11 ##sequence-region PYKB01001357.1 1 3685 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001357.1 Genbank region 1 3685 . + . ID=PYKB01001357.1:1..3685;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001357.1 Genbank gene 4 336 . + . ID=gene-C9F09_23325;Name=C9F09_23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23325 PYKB01001357.1 Protein Homology CDS 4 336 . + 0 ID=cds-TGC80385.1;Parent=gene-C9F09_23325;Dbxref=NCBI_GP:TGC80385.1;Name=TGC80385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457672.1;locus_tag=C9F09_23325;product=preprotein translocase subunit SecG;protein_id=TGC80385.1;transl_table=11 PYKB01001357.1 Genbank gene 350 436 . + . ID=gene-C9F09_23330;Name=C9F09_23330;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_23330 PYKB01001357.1 tRNAscan-SE tRNA 350 436 . + . ID=rna-C9F09_23330;Parent=gene-C9F09_23330;anticodon=(pos:384..386);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_23330;product=tRNA-Leu PYKB01001357.1 tRNAscan-SE exon 350 436 . + . ID=exon-C9F09_23330-1;Parent=rna-C9F09_23330;anticodon=(pos:384..386);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_23330;product=tRNA-Leu PYKB01001357.1 Genbank gene 772 1836 . + . ID=gene-C9F09_23335;Name=C9F09_23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23335 PYKB01001357.1 Protein Homology CDS 772 1836 . + 0 ID=cds-TGC80383.1;Parent=gene-C9F09_23335;Dbxref=NCBI_GP:TGC80383.1;Name=TGC80383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462203.1;locus_tag=C9F09_23335;product=DUF1963 domain-containing protein;protein_id=TGC80383.1;transl_table=11 PYKB01001357.1 Genbank gene 1922 3265 . - . ID=gene-C9F09_23340;Name=C9F09_23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23340 PYKB01001357.1 Protein Homology CDS 1922 3265 . - 0 ID=cds-TGC80384.1;Parent=gene-C9F09_23340;Dbxref=NCBI_GP:TGC80384.1;Name=TGC80384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=C9F09_23340;product=argininosuccinate synthase;protein_id=TGC80384.1;transl_table=11 PYKB01001357.1 Genbank gene 3609 3685 . + . ID=gene-C9F09_23345;Name=C9F09_23345;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_23345 PYKB01001357.1 tRNAscan-SE tRNA 3609 3685 . + . ID=rna-C9F09_23345;Parent=gene-C9F09_23345;anticodon=(pos:3643..3645);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_23345;product=tRNA-Met PYKB01001357.1 tRNAscan-SE exon 3609 3685 . + . ID=exon-C9F09_23345-1;Parent=rna-C9F09_23345;anticodon=(pos:3643..3645);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_23345;product=tRNA-Met ##sequence-region PYKB01001466.1 1 3671 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001466.1 Genbank region 1 3671 . + . ID=PYKB01001466.1:1..3671;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001466.1 Genbank gene 1 333 . + . ID=gene-C9F09_25530;Name=C9F09_25530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25530;partial=true;start_range=.,1 PYKB01001466.1 Protein Homology CDS 1 333 . + 0 ID=cds-TGC77879.1;Parent=gene-C9F09_25530;Dbxref=NCBI_GP:TGC77879.1;Name=TGC77879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458607.1;locus_tag=C9F09_25530;partial=true;product=hypothetical protein;protein_id=TGC77879.1;start_range=.,1;transl_table=11 PYKB01001466.1 Genbank pseudogene 627 968 . - . ID=gene-C9F09_25535;Name=C9F09_25535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_25535;pseudo=true PYKB01001466.1 Protein Homology CDS 627 968 . - 0 ID=cds-C9F09_25535;Parent=gene-C9F09_25535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727658.1;locus_tag=C9F09_25535;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001466.1 Genbank gene 988 1170 . + . ID=gene-C9F09_25540;Name=C9F09_25540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25540 PYKB01001466.1 Protein Homology CDS 988 1170 . + 0 ID=cds-TGC77880.1;Parent=gene-C9F09_25540;Dbxref=NCBI_GP:TGC77880.1;Name=TGC77880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750926.1;locus_tag=C9F09_25540;product=GTPase;protein_id=TGC77880.1;transl_table=11 PYKB01001466.1 Genbank gene 1163 1450 . - . ID=gene-C9F09_25545;Name=C9F09_25545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25545 PYKB01001466.1 Protein Homology CDS 1163 1450 . - 0 ID=cds-TGC77881.1;Parent=gene-C9F09_25545;Dbxref=NCBI_GP:TGC77881.1;Name=TGC77881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458610.1;locus_tag=C9F09_25545;product=spore gernimation protein GerE;protein_id=TGC77881.1;transl_table=11 PYKB01001466.1 Genbank gene 1447 2322 . - . ID=gene-C9F09_25550;Name=C9F09_25550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25550 PYKB01001466.1 Protein Homology CDS 1447 2322 . - 0 ID=cds-TGC77882.1;Parent=gene-C9F09_25550;Dbxref=NCBI_GP:TGC77882.1;Name=TGC77882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458611.1;locus_tag=C9F09_25550;product=AraC family transcriptional regulator;protein_id=TGC77882.1;transl_table=11 PYKB01001466.1 Genbank gene 2587 2805 . - . ID=gene-C9F09_25555;Name=C9F09_25555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25555 PYKB01001466.1 Protein Homology CDS 2587 2805 . - 0 ID=cds-TGC77883.1;Parent=gene-C9F09_25555;Dbxref=NCBI_GP:TGC77883.1;Name=TGC77883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989281.1;locus_tag=C9F09_25555;product=hypothetical protein;protein_id=TGC77883.1;transl_table=11 PYKB01001466.1 Genbank gene 3126 3419 . + . ID=gene-C9F09_25560;Name=C9F09_25560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25560 PYKB01001466.1 Protein Homology CDS 3126 3419 . + 0 ID=cds-TGC77884.1;Parent=gene-C9F09_25560;Dbxref=NCBI_GP:TGC77884.1;Name=TGC77884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=C9F09_25560;product=DUF1778 domain-containing protein;protein_id=TGC77884.1;transl_table=11 PYKB01001466.1 Genbank gene 3416 3671 . + . ID=gene-C9F09_25565;Name=C9F09_25565;end_range=3671,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25565;partial=true PYKB01001466.1 Protein Homology CDS 3416 3671 . + 0 ID=cds-TGC77885.1;Parent=gene-C9F09_25565;Dbxref=NCBI_GP:TGC77885.1;Name=TGC77885.1;end_range=3671,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458747.1;locus_tag=C9F09_25565;partial=true;product=GNAT family N-acetyltransferase;protein_id=TGC77885.1;transl_table=11 ##sequence-region PYKB01001292.1 1 3670 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001292.1 Genbank region 1 3670 . + . ID=PYKB01001292.1:1..3670;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001292.1 Genbank pseudogene 85 577 . - . ID=gene-C9F09_22060;Name=C9F09_22060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22060;pseudo=true PYKB01001292.1 Protein Homology CDS 85 577 . - 0 ID=cds-C9F09_22060;Parent=gene-C9F09_22060;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000073959.1;locus_tag=C9F09_22060;product=transposase;pseudo=true;transl_table=11 PYKB01001292.1 Genbank gene 784 1503 . - . ID=gene-C9F09_22065;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=C9F09_22065 PYKB01001292.1 Protein Homology CDS 784 1503 . - 0 ID=cds-TGC81781.1;Parent=gene-C9F09_22065;Dbxref=NCBI_GP:TGC81781.1;Name=TGC81781.1;gbkey=CDS;gene=deoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458982.1;locus_tag=C9F09_22065;product=purine-nucleoside phosphorylase;protein_id=TGC81781.1;transl_table=11 PYKB01001292.1 Genbank gene 1713 2936 . - . ID=gene-C9F09_22070;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=C9F09_22070 PYKB01001292.1 Protein Homology CDS 1713 2936 . - 0 ID=cds-TGC81782.1;Parent=gene-C9F09_22070;Dbxref=NCBI_GP:TGC81782.1;Name=TGC81782.1;gbkey=CDS;gene=deoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458981.1;locus_tag=C9F09_22070;product=phosphopentomutase;protein_id=TGC81782.1;transl_table=11 PYKB01001292.1 Genbank pseudogene 2988 3593 . - . ID=gene-C9F09_22075;Name=C9F09_22075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22075;pseudo=true PYKB01001292.1 Protein Homology CDS 2988 3593 . - 0 ID=cds-C9F09_22075;Parent=gene-C9F09_22075;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=C9F09_22075;product=thymidine phosphorylase;pseudo=true;transl_table=11 ##sequence-region PYKB01000571.1 1 3669 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000571.1 Genbank region 1 3669 . + . ID=PYKB01000571.1:1..3669;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000571.1 Genbank pseudogene 55 2592 . - . ID=gene-C9F09_08065;Name=C9F09_08065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08065;pseudo=true PYKB01000571.1 Protein Homology CDS 55 2592 . - 0 ID=cds-C9F09_08065;Parent=gene-C9F09_08065;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=C9F09_08065;product=RNA polymerase-associated protein RapA;pseudo=true;transl_table=11 PYKB01000571.1 Genbank gene 2617 2865 . + . ID=gene-C9F09_08070;Name=C9F09_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08070 PYKB01000571.1 Protein Homology CDS 2617 2865 . + 0 ID=cds-TGC95990.1;Parent=gene-C9F09_08070;Dbxref=NCBI_GP:TGC95990.1;Name=TGC95990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328796.1;locus_tag=C9F09_08070;product=hypothetical protein;protein_id=TGC95990.1;transl_table=11 PYKB01000571.1 Genbank gene 2766 3669 . - . ID=gene-C9F09_08075;Name=C9F09_08075;end_range=3669,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08075;partial=true PYKB01000571.1 Protein Homology CDS 2766 3669 . - 1 ID=cds-TGC95991.1;Parent=gene-C9F09_08075;Dbxref=NCBI_GP:TGC95991.1;Name=TGC95991.1;Note=Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C;end_range=3669,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=C9F09_08075;partial=true;product=DNA polymerase II;protein_id=TGC95991.1;transl_table=11 ##sequence-region PYKB01000919.1 1 3668 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000919.1 Genbank region 1 3668 . + . ID=PYKB01000919.1:1..3668;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000919.1 Genbank pseudogene 46 741 . - . ID=gene-C9F09_15105;Name=C9F09_15105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15105;pseudo=true PYKB01000919.1 Protein Homology CDS 46 741 . - 0 ID=cds-C9F09_15105;Parent=gene-C9F09_15105;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454656.1;locus_tag=C9F09_15105;product=bifunctional riboflavin kinase/FAD synthetase;pseudo=true;transl_table=11 PYKB01000919.1 Genbank gene 749 964 . - . ID=gene-C9F09_15110;Name=C9F09_15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15110 PYKB01000919.1 Protein Homology CDS 749 964 . - 0 ID=cds-TGC89847.1;Parent=gene-C9F09_15110;Dbxref=NCBI_GP:TGC89847.1;Name=TGC89847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454655.1;locus_tag=C9F09_15110;product=DUF2575 domain-containing protein;protein_id=TGC89847.1;transl_table=11 PYKB01000919.1 Genbank gene 1070 1333 . + . ID=gene-C9F09_15115;Name=C9F09_15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15115 PYKB01000919.1 Protein Homology CDS 1070 1333 . + 0 ID=cds-TGC89848.1;Parent=gene-C9F09_15115;Dbxref=NCBI_GP:TGC89848.1;Name=TGC89848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454654.1;locus_tag=C9F09_15115;product=30S ribosomal protein S20;protein_id=TGC89848.1;transl_table=11 PYKB01000919.1 Genbank gene 1789 3162 . + . ID=gene-C9F09_15120;Name=C9F09_15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15120 PYKB01000919.1 Protein Homology CDS 1789 3162 . + 0 ID=cds-TGC89850.1;Parent=gene-C9F09_15120;Dbxref=NCBI_GP:TGC89850.1;Name=TGC89850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=C9F09_15120;product=MFS transporter;protein_id=TGC89850.1;transl_table=11 PYKB01000919.1 Genbank gene 3202 3668 . + . ID=gene-C9F09_15125;Name=C9F09_15125;end_range=3668,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15125;partial=true PYKB01000919.1 Protein Homology CDS 3202 3668 . + 0 ID=cds-TGC89849.1;Parent=gene-C9F09_15125;Dbxref=NCBI_GP:TGC89849.1;Name=TGC89849.1;end_range=3668,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454652.1;locus_tag=C9F09_15125;partial=true;product=family 31 glucosidase;protein_id=TGC89849.1;transl_table=11 ##sequence-region PYKB01000521.1 1 3664 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000521.1 Genbank region 1 3664 . + . ID=PYKB01000521.1:1..3664;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000521.1 Genbank gene 1 516 . - . ID=gene-C9F09_06980;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=C9F09_06980;partial=true;start_range=.,1 PYKB01000521.1 Protein Homology CDS 1 516 . - 0 ID=cds-TGC97134.1;Parent=gene-C9F09_06980;Dbxref=NCBI_GP:TGC97134.1;Name=TGC97134.1;Note=Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=C9F09_06980;partial=true;product=phosphate ABC transporter permease PtsA;protein_id=TGC97134.1;start_range=.,1;transl_table=11 PYKB01000521.1 Genbank gene 516 1475 . - . ID=gene-C9F09_06985;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=C9F09_06985 PYKB01000521.1 Protein Homology CDS 516 1475 . - 0 ID=cds-TGC97135.1;Parent=gene-C9F09_06985;Dbxref=NCBI_GP:TGC97135.1;Name=TGC97135.1;gbkey=CDS;gene=pstC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458090.1;locus_tag=C9F09_06985;product=phosphate ABC transporter permease subunit PstC;protein_id=TGC97135.1;transl_table=11 PYKB01000521.1 Genbank gene 1611 2651 . - . ID=gene-C9F09_06990;Name=C9F09_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06990 PYKB01000521.1 Protein Homology CDS 1611 2651 . - 0 ID=cds-TGC97136.1;Parent=gene-C9F09_06990;Dbxref=NCBI_GP:TGC97136.1;Name=TGC97136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000867129.1;locus_tag=C9F09_06990;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=TGC97136.1;transl_table=11 PYKB01000521.1 Genbank gene 2818 3664 . - . ID=gene-C9F09_06995;Name=C9F09_06995;end_range=3664,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06995;partial=true PYKB01000521.1 Protein Homology CDS 2818 3664 . - 1 ID=cds-TGC97137.1;Parent=gene-C9F09_06995;Dbxref=NCBI_GP:TGC97137.1;Name=TGC97137.1;end_range=3664,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458088.1;locus_tag=C9F09_06995;partial=true;product=PTS fructose transporter subunit IIBC;protein_id=TGC97137.1;transl_table=11 ##sequence-region PYKB01001483.1 1 3634 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001483.1 Genbank region 1 3634 . + . ID=PYKB01001483.1:1..3634;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001483.1 Genbank gene 1 725 . + . ID=gene-C9F09_25750;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=C9F09_25750;partial=true;start_range=.,1 PYKB01001483.1 Protein Homology CDS 1 725 . + 2 ID=cds-TGC77607.1;Parent=gene-C9F09_25750;Dbxref=NCBI_GP:TGC77607.1;Name=TGC77607.1;Note=may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ;gbkey=CDS;gene=cysN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=C9F09_25750;partial=true;product=sulfate adenylyltransferase subunit CysN;protein_id=TGC77607.1;start_range=.,1;transl_table=11 PYKB01001483.1 Genbank gene 712 1317 . + . ID=gene-C9F09_25755;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=C9F09_25755 PYKB01001483.1 Protein Homology CDS 712 1317 . + 0 ID=cds-TGC77608.1;Parent=gene-C9F09_25755;Dbxref=NCBI_GP:TGC77608.1;Name=TGC77608.1;gbkey=CDS;gene=cysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457322.1;locus_tag=C9F09_25755;product=adenylyl-sulfate kinase;protein_id=TGC77608.1;transl_table=11 PYKB01001483.1 Genbank gene 1335 1691 . + . ID=gene-C9F09_25760;Name=C9F09_25760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25760 PYKB01001483.1 Protein Homology CDS 1335 1691 . + 0 ID=cds-TGC77609.1;Parent=gene-C9F09_25760;Dbxref=NCBI_GP:TGC77609.1;Name=TGC77609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457321.1;locus_tag=C9F09_25760;product=DUF3561 domain-containing protein;protein_id=TGC77609.1;transl_table=11 PYKB01001483.1 Genbank gene 1882 2193 . + . ID=gene-C9F09_25765;Name=C9F09_25765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25765 PYKB01001483.1 Protein Homology CDS 1882 2193 . + 0 ID=cds-TGC77610.1;Parent=gene-C9F09_25765;Dbxref=NCBI_GP:TGC77610.1;Name=TGC77610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457320.1;locus_tag=C9F09_25765;product=cell division protein FtsB;protein_id=TGC77610.1;transl_table=11 PYKB01001483.1 Genbank gene 2212 2922 . + . ID=gene-C9F09_25770;Name=C9F09_25770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25770 PYKB01001483.1 Protein Homology CDS 2212 2922 . + 0 ID=cds-TGC77611.1;Parent=gene-C9F09_25770;Dbxref=NCBI_GP:TGC77611.1;Name=TGC77611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457319.1;locus_tag=C9F09_25770;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=TGC77611.1;transl_table=11 PYKB01001483.1 Genbank gene 2922 3401 . + . ID=gene-C9F09_25775;Name=C9F09_25775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25775 PYKB01001483.1 Protein Homology CDS 2922 3401 . + 0 ID=cds-TGC77612.1;Parent=gene-C9F09_25775;Dbxref=NCBI_GP:TGC77612.1;Name=TGC77612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457318.1;locus_tag=C9F09_25775;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=TGC77612.1;transl_table=11 PYKB01001483.1 Genbank gene 3398 3634 . + . ID=gene-C9F09_25780;Name=truD;end_range=3634,.;gbkey=Gene;gene=truD;gene_biotype=protein_coding;gene_synonym=ygbO;locus_tag=C9F09_25780;partial=true PYKB01001483.1 Protein Homology CDS 3398 3634 . + 0 ID=cds-TGC77613.1;Parent=gene-C9F09_25780;Dbxref=NCBI_GP:TGC77613.1;Name=TGC77613.1;Note=catalyzes the modification of U13 in tRNA(Glu);end_range=3634,.;gbkey=CDS;gene=truD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457317.1;locus_tag=C9F09_25780;partial=true;product=tRNA pseudouridine(13) synthase TruD;protein_id=TGC77613.1;transl_table=11 ##sequence-region PYKB01001209.1 1 3604 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001209.1 Genbank region 1 3604 . + . ID=PYKB01001209.1:1..3604;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001209.1 Genbank gene 1 1011 . + . ID=gene-C9F09_20580;Name=C9F09_20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20580;partial=true;start_range=.,1 PYKB01001209.1 Protein Homology CDS 1 1011 . + 0 ID=cds-TGC83347.1;Parent=gene-C9F09_20580;Dbxref=NCBI_GP:TGC83347.1;Name=TGC83347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459348.1;locus_tag=C9F09_20580;partial=true;product=ATPase;protein_id=TGC83347.1;start_range=.,1;transl_table=11 PYKB01001209.1 Genbank gene 1023 1487 . + . ID=gene-C9F09_20585;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=C9F09_20585 PYKB01001209.1 Protein Homology CDS 1023 1487 . + 0 ID=cds-TGC83348.1;Parent=gene-C9F09_20585;Dbxref=NCBI_GP:TGC83348.1;Name=TGC83348.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=C9F09_20585;product=Cu(I)-responsive transcriptional regulator;protein_id=TGC83348.1;transl_table=11 PYKB01001209.1 Genbank gene 1565 1759 . + . ID=gene-C9F09_20590;Name=C9F09_20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20590 PYKB01001209.1 Protein Homology CDS 1565 1759 . + 0 ID=cds-TGC83349.1;Parent=gene-C9F09_20590;Dbxref=NCBI_GP:TGC83349.1;Name=TGC83349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=C9F09_20590;product=copper chaperone;protein_id=TGC83349.1;transl_table=11 PYKB01001209.1 Genbank gene 2051 3304 . + . ID=gene-C9F09_20595;Name=C9F09_20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20595 PYKB01001209.1 Protein Homology CDS 2051 3304 . + 0 ID=cds-TGC83350.1;Parent=gene-C9F09_20595;Dbxref=NCBI_GP:TGC83350.1;Name=TGC83350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454952.1;locus_tag=C9F09_20595;product=MFS transporter;protein_id=TGC83350.1;transl_table=11 PYKB01001209.1 Genbank gene 3493 3604 . + . ID=gene-C9F09_20600;Name=C9F09_20600;end_range=3604,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20600;partial=true PYKB01001209.1 Protein Homology CDS 3493 3604 . + 0 ID=cds-TGC83351.1;Parent=gene-C9F09_20600;Dbxref=NCBI_GP:TGC83351.1;Name=TGC83351.1;end_range=3604,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454953.1;locus_tag=C9F09_20600;partial=true;product=restriction endonuclease subunit M;protein_id=TGC83351.1;transl_table=11 ##sequence-region PYKB01000398.1 1 3519 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000398.1 Genbank region 1 3519 . + . ID=PYKB01000398.1:1..3519;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000398.1 Genbank gene 329 2092 . + . ID=gene-C9F09_04430;Name=C9F09_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04430 PYKB01000398.1 Protein Homology CDS 329 2092 . + 0 ID=cds-TGC99684.1;Parent=gene-C9F09_04430;Dbxref=NCBI_GP:TGC99684.1;Name=TGC99684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=C9F09_04430;product=chitinase;protein_id=TGC99684.1;transl_table=11 PYKB01000398.1 Genbank gene 2168 3519 . + . ID=gene-C9F09_04435;Name=ldcC;end_range=3519,.;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=C9F09_04435;partial=true PYKB01000398.1 Protein Homology CDS 2168 3519 . + 0 ID=cds-TGC99685.1;Parent=gene-C9F09_04435;Dbxref=NCBI_GP:TGC99685.1;Name=TGC99685.1;end_range=3519,.;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454842.1;locus_tag=C9F09_04435;partial=true;product=lysine decarboxylase LdcC;protein_id=TGC99685.1;transl_table=11 ##sequence-region PYKB01001700.1 1 3584 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001700.1 Genbank region 1 3584 . + . ID=PYKB01001700.1:1..3584;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001700.1 Genbank gene 1 973 . + . ID=gene-C9F09_29720;Name=C9F09_29720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29720;partial=true;start_range=.,1 PYKB01001700.1 Protein Homology CDS 1 973 . + 1 ID=cds-TGC72075.1;Parent=gene-C9F09_29720;Dbxref=NCBI_GP:TGC72075.1;Name=TGC72075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462132.3;locus_tag=C9F09_29720;partial=true;product=putrescine aminotransferase;protein_id=TGC72075.1;start_range=.,1;transl_table=11 PYKB01001700.1 Genbank gene 1144 3162 . + . ID=gene-C9F09_29725;Name=C9F09_29725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29725 PYKB01001700.1 Protein Homology CDS 1144 3162 . + 0 ID=cds-TGC72076.1;Parent=gene-C9F09_29725;Dbxref=NCBI_GP:TGC72076.1;Name=TGC72076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=C9F09_29725;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=TGC72076.1;transl_table=11 PYKB01001700.1 Genbank gene 3243 3584 . - . ID=gene-C9F09_29730;Name=C9F09_29730;end_range=3584,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29730;partial=true PYKB01001700.1 Protein Homology CDS 3243 3584 . - 0 ID=cds-TGC72077.1;Parent=gene-C9F09_29730;Dbxref=NCBI_GP:TGC72077.1;Name=TGC72077.1;end_range=3584,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457609.1;locus_tag=C9F09_29730;partial=true;product=23S rRNA (guanine(1835)-N(2))-methyltransferase;protein_id=TGC72077.1;transl_table=11 ##sequence-region PYKB01000488.1 1 11182 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000488.1 Genbank region 1 11182 . + . ID=PYKB01000488.1:1..11182;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000488.1 Genbank gene 1 1307 . + . ID=gene-C9F09_06120;Name=C9F09_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06120;partial=true;start_range=.,1 PYKB01000488.1 Protein Homology CDS 1 1307 . + 2 ID=cds-TGC97934.1;Parent=gene-C9F09_06120;Dbxref=NCBI_GP:TGC97934.1;Name=TGC97934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=C9F09_06120;partial=true;product=methyl-accepting chemotaxis protein;protein_id=TGC97934.1;start_range=.,1;transl_table=11 PYKB01000488.1 Genbank gene 1392 1679 . + . ID=gene-C9F09_06125;Name=C9F09_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06125 PYKB01000488.1 Protein Homology CDS 1392 1679 . + 0 ID=cds-TGC97921.1;Parent=gene-C9F09_06125;Dbxref=NCBI_GP:TGC97921.1;Name=TGC97921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457546.1;locus_tag=C9F09_06125;product=DUF2623 domain-containing protein;protein_id=TGC97921.1;transl_table=11 PYKB01000488.1 Genbank gene 1676 1861 . + . ID=gene-C9F09_06130;Name=C9F09_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06130 PYKB01000488.1 Protein Homology CDS 1676 1861 . + 0 ID=cds-TGC97922.1;Parent=gene-C9F09_06130;Dbxref=NCBI_GP:TGC97922.1;Name=TGC97922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519003.1;locus_tag=C9F09_06130;product=hypothetical protein;protein_id=TGC97922.1;transl_table=11 PYKB01000488.1 Genbank gene 1869 2987 . + . ID=gene-C9F09_06135;Name=C9F09_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06135 PYKB01000488.1 Protein Homology CDS 1869 2987 . + 0 ID=cds-TGC97923.1;Parent=gene-C9F09_06135;Dbxref=NCBI_GP:TGC97923.1;Name=TGC97923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457545.1;locus_tag=C9F09_06135;product=hydrogenase 2 small subunit;protein_id=TGC97923.1;transl_table=11 PYKB01000488.1 Genbank gene 2990 3976 . + . ID=gene-C9F09_06140;Name=C9F09_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06140 PYKB01000488.1 Protein Homology CDS 2990 3976 . + 0 ID=cds-TGC97924.1;Parent=gene-C9F09_06140;Dbxref=NCBI_GP:TGC97924.1;Name=TGC97924.1;Note=Fe-S ferrodoxin type component%3B participates in the periplasmic electron-transferring activity of hydrogenase 2;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457544.1;locus_tag=C9F09_06140;product=hydrogenase 2 operon protein HybA;protein_id=TGC97924.1;transl_table=11 PYKB01000488.1 Genbank gene 3966 5144 . + . ID=gene-C9F09_06145;Name=C9F09_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06145 PYKB01000488.1 Protein Homology CDS 3966 5144 . + 0 ID=cds-TGC97925.1;Parent=gene-C9F09_06145;Dbxref=NCBI_GP:TGC97925.1;Name=TGC97925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=C9F09_06145;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=TGC97925.1;transl_table=11 PYKB01000488.1 Genbank gene 5141 6844 . + . ID=gene-C9F09_06150;Name=C9F09_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06150 PYKB01000488.1 Protein Homology CDS 5141 6844 . + 0 ID=cds-TGC97926.1;Parent=gene-C9F09_06150;Dbxref=NCBI_GP:TGC97926.1;Name=TGC97926.1;Note=involved in hydrogen uptake;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=C9F09_06150;product=hydrogenase 2 large subunit;protein_id=TGC97926.1;transl_table=11 PYKB01000488.1 Genbank gene 6844 7338 . + . ID=gene-C9F09_06155;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=C9F09_06155 PYKB01000488.1 Protein Homology CDS 6844 7338 . + 0 ID=cds-TGC97927.1;Parent=gene-C9F09_06155;Dbxref=NCBI_GP:TGC97927.1;Name=TGC97927.1;gbkey=CDS;gene=hybD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157468.1;locus_tag=C9F09_06155;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=TGC97927.1;transl_table=11 PYKB01000488.1 Genbank gene 7331 7819 . + . ID=gene-C9F09_06160;Name=C9F09_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06160 PYKB01000488.1 Protein Homology CDS 7331 7819 . + 0 ID=cds-TGC97928.1;Parent=gene-C9F09_06160;Dbxref=NCBI_GP:TGC97928.1;Name=TGC97928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457540.1;locus_tag=C9F09_06160;product=hydrogenase 2-specific chaperone;protein_id=TGC97928.1;transl_table=11 PYKB01000488.1 Genbank gene 7812 8153 . + . ID=gene-C9F09_06165;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9F09_06165 PYKB01000488.1 Protein Homology CDS 7812 8153 . + 0 ID=cds-TGC97929.1;Parent=gene-C9F09_06165;Dbxref=NCBI_GP:TGC97929.1;Name=TGC97929.1;gbkey=CDS;gene=hypA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457539.1;locus_tag=C9F09_06165;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=TGC97929.1;transl_table=11 PYKB01000488.1 Genbank gene 8181 8429 . + . ID=gene-C9F09_06170;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=C9F09_06170 PYKB01000488.1 Protein Homology CDS 8181 8429 . + 0 ID=cds-TGC97930.1;Parent=gene-C9F09_06170;Dbxref=NCBI_GP:TGC97930.1;Name=TGC97930.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457538.1;locus_tag=C9F09_06170;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=TGC97930.1;transl_table=11 PYKB01000488.1 Genbank gene 8505 9557 . + . ID=gene-C9F09_06175;Name=C9F09_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06175 PYKB01000488.1 Protein Homology CDS 8505 9557 . + 0 ID=cds-TGC97931.1;Parent=gene-C9F09_06175;Dbxref=NCBI_GP:TGC97931.1;Name=TGC97931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=C9F09_06175;product=hypothetical protein;protein_id=TGC97931.1;transl_table=11 PYKB01000488.1 Genbank gene 9557 10267 . + . ID=gene-C9F09_06180;Name=C9F09_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06180 PYKB01000488.1 Protein Homology CDS 9557 10267 . + 0 ID=cds-TGC97932.1;Parent=gene-C9F09_06180;Dbxref=NCBI_GP:TGC97932.1;Name=TGC97932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=C9F09_06180;product=molybdenum ABC transporter substrate-binding protein;protein_id=TGC97932.1;transl_table=11 PYKB01000488.1 Genbank gene 10335 11182 . - . ID=gene-C9F09_06185;Name=C9F09_06185;end_range=11182,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06185;partial=true PYKB01000488.1 Protein Homology CDS 10335 11182 . - 2 ID=cds-TGC97933.1;Parent=gene-C9F09_06185;Dbxref=NCBI_GP:TGC97933.1;Name=TGC97933.1;end_range=11182,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=C9F09_06185;partial=true;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=TGC97933.1;transl_table=11 ##sequence-region PYKB01001450.1 1 3575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001450.1 Genbank region 1 3575 . + . ID=PYKB01001450.1:1..3575;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001450.1 Genbank pseudogene 11 1639 . + . ID=gene-C9F09_25210;Name=C9F09_25210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_25210;pseudo=true PYKB01001450.1 Protein Homology CDS 11 1639 . + 0 ID=cds-C9F09_25210;Parent=gene-C9F09_25210;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662777.1;locus_tag=C9F09_25210;product=phosphoenolpyruvate--protein phosphotransferase;pseudo=true;transl_table=11 PYKB01001450.1 Genbank gene 1680 2189 . + . ID=gene-C9F09_25215;Name=C9F09_25215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25215 PYKB01001450.1 Protein Homology CDS 1680 2189 . + 0 ID=cds-TGC78222.1;Parent=gene-C9F09_25215;Dbxref=NCBI_GP:TGC78222.1;Name=TGC78222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456969.1;locus_tag=C9F09_25215;product=glucose-specific phosphotransferase enzyme IIA component;protein_id=TGC78222.1;transl_table=11 PYKB01001450.1 Genbank gene 2339 2578 . - . ID=gene-C9F09_25220;Name=C9F09_25220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25220 PYKB01001450.1 Protein Homology CDS 2339 2578 . - 0 ID=cds-TGC78223.1;Parent=gene-C9F09_25220;Dbxref=NCBI_GP:TGC78223.1;Name=TGC78223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=C9F09_25220;product=cytoplasmic protein;protein_id=TGC78223.1;transl_table=11 PYKB01001450.1 Genbank gene 2575 3441 . - . ID=gene-C9F09_25225;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;locus_tag=C9F09_25225 PYKB01001450.1 Protein Homology CDS 2575 3441 . - 0 ID=cds-TGC78224.1;Parent=gene-C9F09_25225;Dbxref=NCBI_GP:TGC78224.1;Name=TGC78224.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;gene=pdxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=C9F09_25225;product=pyridoxine kinase;protein_id=TGC78224.1;transl_table=11 ##sequence-region PYKB01001348.1 1 3562 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001348.1 Genbank region 1 3562 . + . ID=PYKB01001348.1:1..3562;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001348.1 Genbank gene 1 254 . - . ID=gene-C9F09_23180;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=C9F09_23180;partial=true;start_range=.,1 PYKB01001348.1 Protein Homology CDS 1 254 . - 0 ID=cds-TGC80533.1;Parent=gene-C9F09_23180;Dbxref=NCBI_GP:TGC80533.1;Name=TGC80533.1;Note=catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP;gbkey=CDS;gene=cobU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=C9F09_23180;partial=true;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=TGC80533.1;start_range=.,1;transl_table=11 PYKB01001348.1 Genbank gene 251 1771 . - . ID=gene-C9F09_23185;Name=C9F09_23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23185 PYKB01001348.1 Protein Homology CDS 251 1771 . - 0 ID=cds-TGC80534.1;Parent=gene-C9F09_23185;Dbxref=NCBI_GP:TGC80534.1;Name=TGC80534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456573.1;locus_tag=C9F09_23185;product=cobyric acid synthase CobQ;protein_id=TGC80534.1;transl_table=11 PYKB01001348.1 Genbank gene 1768 2583 . - . ID=gene-C9F09_23190;Name=C9F09_23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23190 PYKB01001348.1 Protein Homology CDS 1768 2583 . - 0 ID=cds-TGC80535.1;Parent=gene-C9F09_23190;Dbxref=NCBI_GP:TGC80535.1;Name=TGC80535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456574.1;locus_tag=C9F09_23190;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=TGC80535.1;transl_table=11 PYKB01001348.1 Genbank gene 2592 3269 . - . ID=gene-C9F09_23195;Name=C9F09_23195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23195 PYKB01001348.1 Protein Homology CDS 2592 3269 . - 0 ID=cds-TGC80536.1;Parent=gene-C9F09_23195;Dbxref=NCBI_GP:TGC80536.1;Name=TGC80536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456575.1;locus_tag=C9F09_23195;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=TGC80536.1;transl_table=11 PYKB01001348.1 Genbank gene 3256 3537 . - . ID=gene-C9F09_23200;Name=C9F09_23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23200 PYKB01001348.1 Protein Homology CDS 3256 3537 . - 0 ID=cds-TGC80537.1;Parent=gene-C9F09_23200;Dbxref=NCBI_GP:TGC80537.1;Name=TGC80537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456576.1;locus_tag=C9F09_23200;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=TGC80537.1;transl_table=11 ##sequence-region PYKB01000686.1 1 3549 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000686.1 Genbank region 1 3549 . + . ID=PYKB01000686.1:1..3549;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000686.1 Genbank pseudogene 12 695 . - . ID=gene-C9F09_10400;Name=C9F09_10400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10400;pseudo=true PYKB01000686.1 Protein Homology CDS 12 695 . - 0 ID=cds-C9F09_10400;Parent=gene-C9F09_10400;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456959.1;locus_tag=C9F09_10400;product=purine-nucleoside phosphorylase;pseudo=true;transl_table=11 PYKB01000686.1 Genbank gene 951 1712 . + . ID=gene-C9F09_10405;Name=C9F09_10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10405 PYKB01000686.1 Protein Homology CDS 951 1712 . + 0 ID=cds-TGC93894.1;Parent=gene-C9F09_10405;Dbxref=NCBI_GP:TGC93894.1;Name=TGC93894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=C9F09_10405;product=hypothetical protein;protein_id=TGC93894.1;transl_table=11 PYKB01000686.1 Genbank gene 1774 2700 . - . ID=gene-C9F09_10410;Name=C9F09_10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10410 PYKB01000686.1 Protein Homology CDS 1774 2700 . - 0 ID=cds-TGC93895.1;Parent=gene-C9F09_10410;Dbxref=NCBI_GP:TGC93895.1;Name=TGC93895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=C9F09_10410;product=LysR family transcriptional regulator;protein_id=TGC93895.1;transl_table=11 PYKB01000686.1 Genbank gene 2790 3549 . + . ID=gene-C9F09_10415;Name=C9F09_10415;end_range=3549,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10415;partial=true PYKB01000686.1 Protein Homology CDS 2790 3549 . + 0 ID=cds-TGC93896.1;Parent=gene-C9F09_10415;Dbxref=NCBI_GP:TGC93896.1;Name=TGC93896.1;end_range=3549,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456962.1;locus_tag=C9F09_10415;partial=true;product=hypothetical protein;protein_id=TGC93896.1;transl_table=11 ##sequence-region PYKB01001584.1 1 3545 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001584.1 Genbank region 1 3545 . + . ID=PYKB01001584.1:1..3545;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001584.1 Genbank gene 122 874 . - . ID=gene-C9F09_27835;Name=C9F09_27835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27835 PYKB01001584.1 Protein Homology CDS 122 874 . - 0 ID=cds-TGC75173.1;Parent=gene-C9F09_27835;Dbxref=NCBI_GP:TGC75173.1;Name=TGC75173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=C9F09_27835;product=cellulose biosynthesis protein BcsQ;protein_id=TGC75173.1;transl_table=11 PYKB01001584.1 Genbank gene 875 1078 . - . ID=gene-C9F09_27840;Name=C9F09_27840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27840 PYKB01001584.1 Protein Homology CDS 875 1078 . - 0 ID=cds-TGC75174.1;Parent=gene-C9F09_27840;Dbxref=NCBI_GP:TGC75174.1;Name=TGC75174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458299.1;locus_tag=C9F09_27840;product=hypothetical protein;protein_id=TGC75174.1;transl_table=11 PYKB01001584.1 Genbank gene 1323 2894 . + . ID=gene-C9F09_27845;Name=C9F09_27845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27845 PYKB01001584.1 Protein Homology CDS 1323 2894 . + 0 ID=cds-TGC75175.1;Parent=gene-C9F09_27845;Dbxref=NCBI_GP:TGC75175.1;Name=TGC75175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=C9F09_27845;product=cellulose biosynthesis protein BcsE;protein_id=TGC75175.1;transl_table=11 PYKB01001584.1 Genbank gene 2891 3082 . + . ID=gene-C9F09_27850;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=C9F09_27850 PYKB01001584.1 Protein Homology CDS 2891 3082 . + 0 ID=cds-TGC75176.1;Parent=gene-C9F09_27850;Dbxref=NCBI_GP:TGC75176.1;Name=TGC75176.1;gbkey=CDS;gene=bcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458297.1;locus_tag=C9F09_27850;product=cellulose biosynthesis protein BcsF;protein_id=TGC75176.1;transl_table=11 PYKB01001584.1 Genbank gene 3079 3545 . + . ID=gene-C9F09_27855;Name=bcsG;end_range=3545,.;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=C9F09_27855;partial=true PYKB01001584.1 Protein Homology CDS 3079 3545 . + 0 ID=cds-TGC75177.1;Parent=gene-C9F09_27855;Dbxref=NCBI_GP:TGC75177.1;Name=TGC75177.1;end_range=3545,.;gbkey=CDS;gene=bcsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458296.1;locus_tag=C9F09_27855;partial=true;product=cellulose biosynthesis protein BcsG;protein_id=TGC75177.1;transl_table=11 ##sequence-region PYKB01001429.1 1 3534 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001429.1 Genbank region 1 3534 . + . ID=PYKB01001429.1:1..3534;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001429.1 Genbank gene 1 146 . + . ID=gene-C9F09_24570;Name=C9F09_24570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24570;partial=true;start_range=.,1 PYKB01001429.1 Protein Homology CDS 1 146 . + 2 ID=cds-TGC78783.1;Parent=gene-C9F09_24570;Dbxref=NCBI_GP:TGC78783.1;Name=TGC78783.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=C9F09_24570;partial=true;product=dUTP diphosphatase;protein_id=TGC78783.1;start_range=.,1;transl_table=11 PYKB01001429.1 Genbank gene 254 850 . + . ID=gene-C9F09_24575;Name=C9F09_24575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24575 PYKB01001429.1 Protein Homology CDS 254 850 . + 0 ID=cds-TGC78784.1;Parent=gene-C9F09_24575;Dbxref=NCBI_GP:TGC78784.1;Name=TGC78784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=C9F09_24575;product=nucleoid occlusion factor SlmA;protein_id=TGC78784.1;transl_table=11 PYKB01001429.1 Genbank gene 928 1569 . - . ID=gene-C9F09_24580;Name=C9F09_24580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24580 PYKB01001429.1 Protein Homology CDS 928 1569 . - 0 ID=cds-TGC78785.1;Parent=gene-C9F09_24580;Dbxref=NCBI_GP:TGC78785.1;Name=TGC78785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=C9F09_24580;product=orotate phosphoribosyltransferase;protein_id=TGC78785.1;transl_table=11 PYKB01001429.1 Genbank gene 1648 2364 . - . ID=gene-C9F09_24585;Name=C9F09_24585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24585 PYKB01001429.1 Protein Homology CDS 1648 2364 . - 0 ID=cds-TGC78786.1;Parent=gene-C9F09_24585;Dbxref=NCBI_GP:TGC78786.1;Name=TGC78786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=C9F09_24585;product=ribonuclease PH;protein_id=TGC78786.1;transl_table=11 PYKB01001429.1 Genbank gene 2296 2475 . + . ID=gene-C9F09_24590;Name=C9F09_24590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24590 PYKB01001429.1 Protein Homology CDS 2296 2475 . + 0 ID=cds-TGC78789.1;Parent=gene-C9F09_24590;Dbxref=NCBI_GP:TGC78789.1;Name=TGC78789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001599866.1;locus_tag=C9F09_24590;product=hypothetical protein;protein_id=TGC78789.1;transl_table=11 PYKB01001429.1 Genbank gene 2490 3353 . + . ID=gene-C9F09_24595;Name=C9F09_24595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24595 PYKB01001429.1 Protein Homology CDS 2490 3353 . + 0 ID=cds-TGC78787.1;Parent=gene-C9F09_24595;Dbxref=NCBI_GP:TGC78787.1;Name=TGC78787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=C9F09_24595;product=YicC family protein;protein_id=TGC78787.1;transl_table=11 PYKB01001429.1 Genbank gene 3403 3534 . - . ID=gene-C9F09_24600;Name=C9F09_24600;end_range=3534,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24600;partial=true PYKB01001429.1 Protein Homology CDS 3403 3534 . - 0 ID=cds-TGC78788.1;Parent=gene-C9F09_24600;Dbxref=NCBI_GP:TGC78788.1;Name=TGC78788.1;end_range=3534,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458190.1;locus_tag=C9F09_24600;partial=true;product=LysR family transcriptional regulator;protein_id=TGC78788.1;transl_table=11 ##sequence-region PYKB01001010.1 1 3522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001010.1 Genbank region 1 3522 . + . ID=PYKB01001010.1:1..3522;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001010.1 Genbank gene 1 589 . + . ID=gene-C9F09_16890;Name=C9F09_16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16890;partial=true;start_range=.,1 PYKB01001010.1 Protein Homology CDS 1 589 . + 1 ID=cds-TGC87993.1;Parent=gene-C9F09_16890;Dbxref=NCBI_GP:TGC87993.1;Name=TGC87993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454704.1;locus_tag=C9F09_16890;partial=true;product=peptidylprolyl isomerase SurA;protein_id=TGC87993.1;start_range=.,1;transl_table=11 PYKB01001010.1 Genbank gene 589 1578 . + . ID=gene-C9F09_16895;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=C9F09_16895 PYKB01001010.1 Protein Homology CDS 589 1578 . + 0 ID=cds-TGC87994.1;Parent=gene-C9F09_16895;Dbxref=NCBI_GP:TGC87994.1;Name=TGC87994.1;gbkey=CDS;gene=pdxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454703.1;locus_tag=C9F09_16895;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=TGC87994.1;transl_table=11 PYKB01001010.1 Genbank gene 1575 2396 . + . ID=gene-C9F09_16900;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=C9F09_16900 PYKB01001010.1 Protein Homology CDS 1575 2396 . + 0 ID=cds-TGC87995.1;Parent=gene-C9F09_16900;Dbxref=NCBI_GP:TGC87995.1;Name=TGC87995.1;Note=in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions;gbkey=CDS;gene=ksgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454702.1;locus_tag=C9F09_16900;product=ribosomal RNA small subunit methyltransferase A;protein_id=TGC87995.1;transl_table=11 PYKB01001010.1 Genbank gene 2399 2776 . + . ID=gene-C9F09_16905;Name=C9F09_16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16905 PYKB01001010.1 Protein Homology CDS 2399 2776 . + 0 ID=cds-TGC87996.1;Parent=gene-C9F09_16905;Dbxref=NCBI_GP:TGC87996.1;Name=TGC87996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=C9F09_16905;product=Co2+/Mg2+ efflux protein ApaG;protein_id=TGC87996.1;transl_table=11 PYKB01001010.1 Genbank gene 2787 3522 . + . ID=gene-C9F09_16910;Name=apaH;end_range=3522,.;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=C9F09_16910;partial=true PYKB01001010.1 Protein Homology CDS 2787 3522 . + 0 ID=cds-TGC87997.1;Parent=gene-C9F09_16910;Dbxref=NCBI_GP:TGC87997.1;Name=TGC87997.1;Note=hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP;end_range=3522,.;gbkey=CDS;gene=apaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454700.1;locus_tag=C9F09_16910;partial=true;product=diadenosine tetraphosphatase;protein_id=TGC87997.1;transl_table=11 ##sequence-region PYKB01000874.1 1 3521 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000874.1 Genbank region 1 3521 . + . ID=PYKB01000874.1:1..3521;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000874.1 Genbank gene 1 679 . - . ID=gene-C9F09_14225;Name=C9F09_14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14225;partial=true;start_range=.,1 PYKB01000874.1 Protein Homology CDS 1 679 . - 0 ID=cds-TGC90727.1;Parent=gene-C9F09_14225;Dbxref=NCBI_GP:TGC90727.1;Name=TGC90727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455592.1;locus_tag=C9F09_14225;partial=true;product=two-component sensor histidine kinase;protein_id=TGC90727.1;start_range=.,1;transl_table=11 PYKB01000874.1 Genbank gene 672 1418 . - . ID=gene-C9F09_14230;Name=C9F09_14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14230 PYKB01000874.1 Protein Homology CDS 672 1418 . - 0 ID=cds-TGC90728.1;Parent=gene-C9F09_14230;Dbxref=NCBI_GP:TGC90728.1;Name=TGC90728.1;Note=induced by CusR in the presence of copper%3B YedW induces the expression of the upstream gene yedV (encoding a sensor kinase) as well as yedW%3B yedVW is one of four copper regulons found in E. coli%3B part of the copper homeostasis mechanism%3B confers resistance to copper and several drugs when induced;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460069.3;locus_tag=C9F09_14230;product=DNA-binding response regulator;protein_id=TGC90728.1;transl_table=11 PYKB01000874.1 Genbank gene 1488 1898 . + . ID=gene-C9F09_14235;Name=C9F09_14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14235 PYKB01000874.1 Protein Homology CDS 1488 1898 . + 0 ID=cds-TGC90729.1;Parent=gene-C9F09_14235;Dbxref=NCBI_GP:TGC90729.1;Name=TGC90729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455594.1;locus_tag=C9F09_14235;product=hydroxyisourate hydrolase;protein_id=TGC90729.1;transl_table=11 PYKB01000874.1 Genbank gene 2231 2743 . - . ID=gene-C9F09_14240;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=C9F09_14240 PYKB01000874.1 Protein Homology CDS 2231 2743 . - 0 ID=cds-TGC90730.1;Parent=gene-C9F09_14240;Dbxref=NCBI_GP:TGC90730.1;Name=TGC90730.1;Note=catalyzes the reduction of MN%2C FAD and riboflavin by NADH;gbkey=CDS;gene=hpaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=C9F09_14240;product=4-hydroxyphenylacetate 3-monooxygenase reductase component;protein_id=TGC90730.1;transl_table=11 PYKB01000874.1 Genbank pseudogene 2761 3447 . - . ID=gene-C9F09_14245;Name=C9F09_14245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_14245;pseudo=true PYKB01000874.1 Protein Homology CDS 2761 3447 . - 0 ID=cds-C9F09_14245;Parent=gene-C9F09_14245;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146095.1;locus_tag=C9F09_14245;product=4-hydroxyphenylacetate 3-monooxygenase;pseudo=true;transl_table=11 ##sequence-region PYKB01001082.1 1 3511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001082.1 Genbank region 1 3511 . + . ID=PYKB01001082.1:1..3511;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001082.1 Genbank gene 1 1214 . - . ID=gene-C9F09_18095;Name=C9F09_18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18095;partial=true;start_range=.,1 PYKB01001082.1 Protein Homology CDS 1 1214 . - 0 ID=cds-TGC86407.1;Parent=gene-C9F09_18095;Dbxref=NCBI_GP:TGC86407.1;Name=TGC86407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456308.1;locus_tag=C9F09_18095;partial=true;product=potassium/proton antiporter;protein_id=TGC86407.1;start_range=.,1;transl_table=11 PYKB01001082.1 Genbank gene 1311 2225 . - . ID=gene-C9F09_18100;Name=C9F09_18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18100 PYKB01001082.1 Protein Homology CDS 1311 2225 . - 0 ID=cds-TGC86408.1;Parent=gene-C9F09_18100;Dbxref=NCBI_GP:TGC86408.1;Name=TGC86408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456307.1;locus_tag=C9F09_18100;product=muramoyltetrapeptide carboxypeptidase;protein_id=TGC86408.1;transl_table=11 PYKB01001082.1 Genbank gene 2396 3007 . + . ID=gene-C9F09_18105;Name=C9F09_18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18105 PYKB01001082.1 Protein Homology CDS 2396 3007 . + 0 ID=cds-TGC86409.1;Parent=gene-C9F09_18105;Dbxref=NCBI_GP:TGC86409.1;Name=TGC86409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456306.1;locus_tag=C9F09_18105;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=TGC86409.1;transl_table=11 PYKB01001082.1 Genbank gene 3021 3511 . - . ID=gene-C9F09_18110;Name=ycgR;end_range=3511,.;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=C9F09_18110;partial=true PYKB01001082.1 Protein Homology CDS 3021 3511 . - 2 ID=cds-TGC86410.1;Parent=gene-C9F09_18110;Dbxref=NCBI_GP:TGC86410.1;Name=TGC86410.1;end_range=3511,.;gbkey=CDS;gene=ycgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=C9F09_18110;partial=true;product=flagellar brake protein YcgR;protein_id=TGC86410.1;transl_table=11 ##sequence-region PYKB01000082.1 1 3508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000082.1 Genbank region 1 3508 . + . ID=PYKB01000082.1:1..3508;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000082.1 Genbank gene 1 1910 . - . ID=gene-C9F09_00990;Name=C9F09_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00990;partial=true;start_range=.,1 PYKB01000082.1 Protein Homology CDS 1 1910 . - 0 ID=cds-TGD05826.1;Parent=gene-C9F09_00990;Dbxref=NCBI_GP:TGD05826.1;Name=TGD05826.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000069371.1;locus_tag=C9F09_00990;partial=true;product=phosphoenolpyruvate synthase;protein_id=TGD05826.1;start_range=.,1;transl_table=11 PYKB01000082.1 Genbank gene 2247 3080 . + . ID=gene-C9F09_00995;Name=C9F09_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00995 PYKB01000082.1 Protein Homology CDS 2247 3080 . + 0 ID=cds-TGD05827.1;Parent=gene-C9F09_00995;Dbxref=NCBI_GP:TGD05827.1;Name=TGD05827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000370994.1;locus_tag=C9F09_00995;product=phosphoenolpyruvate synthase regulatory protein;protein_id=TGD05827.1;transl_table=11 PYKB01000082.1 Genbank gene 3236 3508 . + . ID=gene-C9F09_01000;Name=C9F09_01000;end_range=3508,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01000;partial=true PYKB01000082.1 Protein Homology CDS 3236 3508 . + 0 ID=cds-TGD05828.1;Parent=gene-C9F09_01000;Dbxref=NCBI_GP:TGD05828.1;Name=TGD05828.1;end_range=3508,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456164.1;locus_tag=C9F09_01000;partial=true;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=TGD05828.1;transl_table=11 ##sequence-region PYKB01000948.1 1 3490 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000948.1 Genbank region 1 3490 . + . ID=PYKB01000948.1:1..3490;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000948.1 Genbank gene 7 393 . + . ID=gene-C9F09_15665;Name=C9F09_15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15665 PYKB01000948.1 Protein Homology CDS 7 393 . + 0 ID=cds-TGC89316.1;Parent=gene-C9F09_15665;Dbxref=NCBI_GP:TGC89316.1;Name=TGC89316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001038414.1;locus_tag=C9F09_15665;product=hypothetical protein;protein_id=TGC89316.1;transl_table=11 PYKB01000948.1 Genbank gene 456 2036 . - . ID=gene-C9F09_15670;Name=C9F09_15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15670 PYKB01000948.1 Protein Homology CDS 456 2036 . - 0 ID=cds-TGC89313.1;Parent=gene-C9F09_15670;Dbxref=NCBI_GP:TGC89313.1;Name=TGC89313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=C9F09_15670;product=phosphoethanolamine transferase;protein_id=TGC89313.1;transl_table=11 PYKB01000948.1 Genbank gene 2301 2429 . - . ID=gene-C9F09_15675;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=C9F09_15675 PYKB01000948.1 Protein Homology CDS 2301 2429 . - 0 ID=cds-TGC89314.1;Parent=gene-C9F09_15675;Dbxref=NCBI_GP:TGC89314.1;Name=TGC89314.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009029995.1;locus_tag=C9F09_15675;product=Mn(2+)-response protein MntS;protein_id=TGC89314.1;transl_table=11 PYKB01000948.1 Genbank gene 2615 3088 . + . ID=gene-C9F09_15680;Name=C9F09_15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15680 PYKB01000948.1 Protein Homology CDS 2615 3088 . + 0 ID=cds-TGC89315.1;Parent=gene-C9F09_15680;Dbxref=NCBI_GP:TGC89315.1;Name=TGC89315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455371.1;locus_tag=C9F09_15680;product=transcriptional regulator MntR;protein_id=TGC89315.1;transl_table=11 PYKB01000948.1 Genbank pseudogene 3085 3490 . + . ID=gene-C9F09_15685;Name=C9F09_15685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15685;pseudo=true PYKB01000948.1 Protein Homology CDS 3085 3490 . + 0 ID=cds-C9F09_15685;Parent=gene-C9F09_15685;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455372.1;locus_tag=C9F09_15685;product=anion transporter;pseudo=true;transl_table=11 ##sequence-region PYKB01001685.1 1 11091 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001685.1 Genbank region 1 11091 . + . ID=PYKB01001685.1:1..11091;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001685.1 Genbank pseudogene 1 1285 . - . ID=gene-C9F09_29325;Name=C9F09_29325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29325;pseudo=true PYKB01001685.1 Protein Homology CDS 1 1285 . - 0 ID=cds-C9F09_29325;Parent=gene-C9F09_29325;Note=bifunctional anthranilate synthase II/anthranilate phosphoribosyltransferase%3B TrpD%3B forms a heterotetramer with Trp E and the complex catalyzes the formation of anthranilate from chorismate and glutamine%3B also catalyzes the formation of N-(5-phospho-D-ribosyl)-anthranilate from athranilate and 5-phospho-alpha-D-ribose 1-diphosphate%3B functions in tryptophan biosynthesis%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=C9F09_29325;product=bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase;pseudo=true;transl_table=11 PYKB01001685.1 Genbank gene 1285 2847 . - . ID=gene-C9F09_29330;Name=C9F09_29330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29330 PYKB01001685.1 Protein Homology CDS 1285 2847 . - 0 ID=cds-TGC72633.1;Parent=gene-C9F09_29330;Dbxref=NCBI_GP:TGC72633.1;Name=TGC72633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=C9F09_29330;product=anthranilate synthase component I;protein_id=TGC72633.1;transl_table=11 PYKB01001685.1 Genbank gene 2942 2986 . - . ID=gene-C9F09_29335;Name=C9F09_29335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29335 PYKB01001685.1 Protein Homology CDS 2942 2986 . - 0 ID=cds-TGC72641.1;Parent=gene-C9F09_29335;Dbxref=NCBI_GP:TGC72641.1;Name=TGC72641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=C9F09_29335;product=trp operon leader peptide;protein_id=TGC72641.1;transl_table=11 PYKB01001685.1 Genbank gene 3108 3989 . + . ID=gene-C9F09_29340;Name=C9F09_29340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29340 PYKB01001685.1 Protein Homology CDS 3108 3989 . + 0 ID=cds-TGC72634.1;Parent=gene-C9F09_29340;Dbxref=NCBI_GP:TGC72634.1;Name=TGC72634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=C9F09_29340;product=5'-3' exoribonuclease;protein_id=TGC72634.1;transl_table=11 PYKB01001685.1 Genbank gene 3997 4617 . + . ID=gene-C9F09_29345;Name=C9F09_29345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29345 PYKB01001685.1 Protein Homology CDS 3997 4617 . + 0 ID=cds-TGC72635.1;Parent=gene-C9F09_29345;Dbxref=NCBI_GP:TGC72635.1;Name=TGC72635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=C9F09_29345;product=threonylcarbamoyl-AMP synthase;protein_id=TGC72635.1;transl_table=11 PYKB01001685.1 Genbank gene 4718 5593 . + . ID=gene-C9F09_29350;Name=C9F09_29350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29350 PYKB01001685.1 Protein Homology CDS 4718 5593 . + 0 ID=cds-TGC72636.1;Parent=gene-C9F09_29350;Dbxref=NCBI_GP:TGC72636.1;Name=TGC72636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=C9F09_29350;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=TGC72636.1;transl_table=11 PYKB01001685.1 Genbank gene 5680 6270 . - . ID=gene-C9F09_29355;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=C9F09_29355 PYKB01001685.1 Protein Homology CDS 5680 6270 . - 0 ID=cds-TGC72637.1;Parent=gene-C9F09_29355;Dbxref=NCBI_GP:TGC72637.1;Name=TGC72637.1;gbkey=CDS;gene=cobO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=C9F09_29355;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=TGC72637.1;transl_table=11 PYKB01001685.1 Genbank gene 6267 7028 . - . ID=gene-C9F09_29360;Name=C9F09_29360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29360 PYKB01001685.1 Protein Homology CDS 6267 7028 . - 0 ID=cds-TGC72638.1;Parent=gene-C9F09_29360;Dbxref=NCBI_GP:TGC72638.1;Name=TGC72638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455780.1;locus_tag=C9F09_29360;product=YciK family oxidoreductase;protein_id=TGC72638.1;transl_table=11 PYKB01001685.1 Genbank gene 7266 8312 . + . ID=gene-C9F09_29365;Name=C9F09_29365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29365 PYKB01001685.1 Protein Homology CDS 7266 8312 . + 0 ID=cds-TGC72639.1;Parent=gene-C9F09_29365;Dbxref=NCBI_GP:TGC72639.1;Name=TGC72639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455781.1;locus_tag=C9F09_29365;product=protease SohB;protein_id=TGC72639.1;transl_table=11 PYKB01001685.1 Genbank gene 8354 8605 . - . ID=gene-C9F09_29370;Name=C9F09_29370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29370 PYKB01001685.1 Protein Homology CDS 8354 8605 . - 0 ID=cds-TGC72640.1;Parent=gene-C9F09_29370;Dbxref=NCBI_GP:TGC72640.1;Name=TGC72640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455782.1;locus_tag=C9F09_29370;product=hypothetical protein;protein_id=TGC72640.1;transl_table=11 PYKB01001685.1 Genbank pseudogene 8583 8765 . + . ID=gene-C9F09_29375;Name=C9F09_29375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29375;pseudo=true PYKB01001685.1 Protein Homology CDS 8583 8765 . + 0 ID=cds-C9F09_29375;Parent=gene-C9F09_29375;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001327904.1;locus_tag=C9F09_29375;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001685.1 Genbank pseudogene 9008 11041 . + . ID=gene-C9F09_29380;Name=topA;gbkey=Gene;gene=topA;gene_biotype=pseudogene;locus_tag=C9F09_29380;pseudo=true PYKB01001685.1 Protein Homology CDS 9008 11041 . + 0 ID=cds-C9F09_29380;Parent=gene-C9F09_29380;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=topA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=C9F09_29380;product=type I DNA topoisomerase;pseudo=true;transl_table=11 ##sequence-region PYKB01000776.1 1 3486 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000776.1 Genbank region 1 3486 . + . ID=PYKB01000776.1:1..3486;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000776.1 Genbank pseudogene 84 947 . - . ID=gene-C9F09_12015;Name=C9F09_12015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12015;pseudo=true PYKB01000776.1 Protein Homology CDS 84 947 . - 0 ID=cds-C9F09_12015;Parent=gene-C9F09_12015;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=C9F09_12015;product=DNA polymerase III subunit beta;pseudo=true;transl_table=11 PYKB01000776.1 Genbank gene 952 2352 . - . ID=gene-C9F09_12020;Name=C9F09_12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12020 PYKB01000776.1 Protein Homology CDS 952 2352 . - 0 ID=cds-TGC92537.1;Parent=gene-C9F09_12020;Dbxref=NCBI_GP:TGC92537.1;Name=TGC92537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=C9F09_12020;product=chromosomal replication initiator protein DnaA;protein_id=TGC92537.1;transl_table=11 PYKB01000776.1 Genbank gene 3013 3153 . + . ID=gene-C9F09_12025;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=C9F09_12025 PYKB01000776.1 Protein Homology CDS 3013 3153 . + 0 ID=cds-TGC92538.1;Parent=gene-C9F09_12025;Dbxref=NCBI_GP:TGC92538.1;Name=TGC92538.1;gbkey=CDS;gene=rpmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=C9F09_12025;product=50S ribosomal protein L34;protein_id=TGC92538.1;transl_table=11 PYKB01000776.1 Genbank pseudogene 3170 3475 . + . ID=gene-C9F09_12030;Name=C9F09_12030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12030;pseudo=true PYKB01000776.1 Protein Homology CDS 3170 3475 . + 0 ID=cds-C9F09_12030;Parent=gene-C9F09_12030;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458102.1;locus_tag=C9F09_12030;product=ribonuclease P protein component;pseudo=true;transl_table=11 ##sequence-region PYKB01000143.1 1 3476 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000143.1 Genbank region 1 3476 . + . ID=PYKB01000143.1:1..3476;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000143.1 Genbank pseudogene 39 1124 . - . ID=gene-C9F09_01630;Name=C9F09_01630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01630;pseudo=true PYKB01000143.1 Protein Homology CDS 39 1124 . - 0 ID=cds-C9F09_01630;Parent=gene-C9F09_01630;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=C9F09_01630;product=aminotransferase;pseudo=true;transl_table=11 PYKB01000143.1 Genbank gene 1137 2588 . - . ID=gene-C9F09_01635;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=C9F09_01635 PYKB01000143.1 Protein Homology CDS 1137 2588 . - 0 ID=cds-TGD04607.1;Parent=gene-C9F09_01635;Dbxref=NCBI_GP:TGD04607.1;Name=TGD04607.1;gbkey=CDS;gene=nhaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=C9F09_01635;product=Na+/H+ antiporter NhaC;protein_id=TGD04607.1;transl_table=11 PYKB01000143.1 Genbank gene 2732 3476 . - . ID=gene-C9F09_01640;Name=C9F09_01640;end_range=3476,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01640;partial=true PYKB01000143.1 Protein Homology CDS 2732 3476 . - 1 ID=cds-TGD04608.1;Parent=gene-C9F09_01640;Dbxref=NCBI_GP:TGD04608.1;Name=TGD04608.1;end_range=3476,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=C9F09_01640;partial=true;product=transcriptional regulator;protein_id=TGD04608.1;transl_table=11 ##sequence-region PYKB01001684.1 1 3475 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001684.1 Genbank region 1 3475 . + . ID=PYKB01001684.1:1..3475;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001684.1 Genbank gene 1 426 . + . ID=gene-C9F09_29300;Name=C9F09_29300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29300;partial=true;start_range=.,1 PYKB01001684.1 Protein Homology CDS 1 426 . + 0 ID=cds-TGC72695.1;Parent=gene-C9F09_29300;Dbxref=NCBI_GP:TGC72695.1;Name=TGC72695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=C9F09_29300;partial=true;product=cell envelope integrity protein TolA;protein_id=TGC72695.1;start_range=.,1;transl_table=11 PYKB01001684.1 Genbank gene 550 1842 . + . ID=gene-C9F09_29305;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=C9F09_29305 PYKB01001684.1 Protein Homology CDS 550 1842 . + 0 ID=cds-TGC72698.1;Parent=gene-C9F09_29305;Dbxref=NCBI_GP:TGC72698.1;Name=TGC72698.1;gbkey=CDS;gene=tolB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=C9F09_29305;product=protein TolB;protein_id=TGC72698.1;transl_table=11 PYKB01001684.1 Genbank gene 1877 2401 . + . ID=gene-C9F09_29310;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=C9F09_29310 PYKB01001684.1 Protein Homology CDS 1877 2401 . + 0 ID=cds-TGC72696.1;Parent=gene-C9F09_29310;Dbxref=NCBI_GP:TGC72696.1;Name=TGC72696.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455305.1;locus_tag=C9F09_29310;product=peptidoglycan-associated lipoprotein Pal;protein_id=TGC72696.1;transl_table=11 PYKB01001684.1 Genbank gene 2411 3199 . + . ID=gene-C9F09_29315;Name=C9F09_29315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29315 PYKB01001684.1 Protein Homology CDS 2411 3199 . + 0 ID=cds-TGC72697.1;Parent=gene-C9F09_29315;Dbxref=NCBI_GP:TGC72697.1;Name=TGC72697.1;Note=periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455306.1;locus_tag=C9F09_29315;product=cell division protein CpoB;protein_id=TGC72697.1;transl_table=11 PYKB01001684.1 Genbank gene 3364 3439 . + . ID=gene-C9F09_29320;Name=C9F09_29320;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_29320 PYKB01001684.1 tRNAscan-SE tRNA 3364 3439 . + . ID=rna-C9F09_29320;Parent=gene-C9F09_29320;anticodon=(pos:3397..3399);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_29320;product=tRNA-Lys PYKB01001684.1 tRNAscan-SE exon 3364 3439 . + . ID=exon-C9F09_29320-1;Parent=rna-C9F09_29320;anticodon=(pos:3397..3399);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_29320;product=tRNA-Lys ##sequence-region PYKB01000815.1 1 3473 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000815.1 Genbank region 1 3473 . + . ID=PYKB01000815.1:1..3473;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000815.1 Genbank gene 1 603 . - . ID=gene-C9F09_12720;Name=C9F09_12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12720;partial=true;start_range=.,1 PYKB01000815.1 Protein Homology CDS 1 603 . - 0 ID=cds-TGC91959.1;Parent=gene-C9F09_12720;Dbxref=NCBI_GP:TGC91959.1;Name=TGC91959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455102.1;locus_tag=C9F09_12720;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGC91959.1;start_range=.,1;transl_table=11 PYKB01000815.1 Genbank gene 574 1188 . + . ID=gene-C9F09_12725;Name=C9F09_12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12725 PYKB01000815.1 Protein Homology CDS 574 1188 . + 0 ID=cds-TGC91960.1;Parent=gene-C9F09_12725;Dbxref=NCBI_GP:TGC91960.1;Name=TGC91960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=C9F09_12725;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=TGC91960.1;transl_table=11 PYKB01000815.1 Genbank gene 1343 2113 . + . ID=gene-C9F09_12730;Name=C9F09_12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12730 PYKB01000815.1 Protein Homology CDS 1343 2113 . + 0 ID=cds-TGC91957.1;Parent=gene-C9F09_12730;Dbxref=NCBI_GP:TGC91957.1;Name=TGC91957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455100.1;locus_tag=C9F09_12730;product=oxidoreductase;protein_id=TGC91957.1;transl_table=11 PYKB01000815.1 Genbank gene 2173 3027 . + . ID=gene-C9F09_12735;Name=C9F09_12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12735 PYKB01000815.1 Protein Homology CDS 2173 3027 . + 0 ID=cds-TGC91958.1;Parent=gene-C9F09_12735;Dbxref=NCBI_GP:TGC91958.1;Name=TGC91958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455099.1;locus_tag=C9F09_12735;product=co-chaperone YbbN;protein_id=TGC91958.1;transl_table=11 PYKB01000815.1 Genbank gene 3113 3473 . - . ID=gene-C9F09_12740;Name=C9F09_12740;end_range=3473,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12740;partial=true PYKB01000815.1 Protein Homology CDS 3113 3473 . - 1 ID=cds-TGC91961.1;Parent=gene-C9F09_12740;Dbxref=NCBI_GP:TGC91961.1;Name=TGC91961.1;end_range=3473,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455098.1;locus_tag=C9F09_12740;partial=true;product=iron export ABC transporter permease subunit FetB;protein_id=TGC91961.1;transl_table=11 ##sequence-region PYKB01000840.1 1 3472 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000840.1 Genbank region 1 3472 . + . ID=PYKB01000840.1:1..3472;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000840.1 Genbank gene 52 834 . + . ID=gene-C9F09_13315;Name=C9F09_13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13315 PYKB01000840.1 Protein Homology CDS 52 834 . + 0 ID=cds-TGC91454.1;Parent=gene-C9F09_13315;Dbxref=NCBI_GP:TGC91454.1;Name=TGC91454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837365.1;locus_tag=C9F09_13315;product=hypothetical protein;protein_id=TGC91454.1;transl_table=11 PYKB01000840.1 Genbank gene 961 1305 . + . ID=gene-C9F09_13320;Name=C9F09_13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13320 PYKB01000840.1 Protein Homology CDS 961 1305 . + 0 ID=cds-TGC91450.1;Parent=gene-C9F09_13320;Dbxref=NCBI_GP:TGC91450.1;Name=TGC91450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=C9F09_13320;product=hypothetical protein;protein_id=TGC91450.1;transl_table=11 PYKB01000840.1 Genbank gene 1366 1899 . - . ID=gene-C9F09_13325;Name=C9F09_13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13325 PYKB01000840.1 Protein Homology CDS 1366 1899 . - 0 ID=cds-TGC91451.1;Parent=gene-C9F09_13325;Dbxref=NCBI_GP:TGC91451.1;Name=TGC91451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=C9F09_13325;product=hypothetical protein;protein_id=TGC91451.1;transl_table=11 PYKB01000840.1 Genbank gene 1916 2359 . - . ID=gene-C9F09_13330;Name=C9F09_13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13330 PYKB01000840.1 Protein Homology CDS 1916 2359 . - 0 ID=cds-TGC91452.1;Parent=gene-C9F09_13330;Dbxref=NCBI_GP:TGC91452.1;Name=TGC91452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454627.1;locus_tag=C9F09_13330;product=transcriptional regulator;protein_id=TGC91452.1;transl_table=11 PYKB01000840.1 Genbank gene 2740 3472 . + . ID=gene-C9F09_13335;Name=C9F09_13335;end_range=3472,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13335;partial=true PYKB01000840.1 Protein Homology CDS 2740 3472 . + 0 ID=cds-TGC91453.1;Parent=gene-C9F09_13335;Dbxref=NCBI_GP:TGC91453.1;Name=TGC91453.1;end_range=3472,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=C9F09_13335;partial=true;product=chitinase;protein_id=TGC91453.1;transl_table=11 ##sequence-region PYKB01001683.1 1 3465 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001683.1 Genbank region 1 3465 . + . ID=PYKB01001683.1:1..3465;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001683.1 Genbank pseudogene 33 767 . - . ID=gene-C9F09_29280;Name=C9F09_29280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29280;pseudo=true PYKB01001683.1 Protein Homology CDS 33 767 . - 0 ID=cds-C9F09_29280;Parent=gene-C9F09_29280;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=C9F09_29280;product=2-keto-3-deoxygluconate permease 2;pseudo=true;transl_table=11 PYKB01001683.1 Genbank gene 817 1989 . - . ID=gene-C9F09_29285;Name=C9F09_29285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29285 PYKB01001683.1 Protein Homology CDS 817 1989 . - 0 ID=cds-TGC72723.1;Parent=gene-C9F09_29285;Dbxref=NCBI_GP:TGC72723.1;Name=TGC72723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=C9F09_29285;product=galactonate dehydratase;protein_id=TGC72723.1;transl_table=11 PYKB01001683.1 Genbank gene 2006 2347 . - . ID=gene-C9F09_29290;Name=C9F09_29290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29290 PYKB01001683.1 Protein Homology CDS 2006 2347 . - 0 ID=cds-TGC72722.1;Parent=gene-C9F09_29290;Dbxref=NCBI_GP:TGC72722.1;Name=TGC72722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=C9F09_29290;product=D-galactarate dehydratase;protein_id=TGC72722.1;transl_table=11 PYKB01001683.1 Genbank pseudogene 2584 3387 . + . ID=gene-C9F09_29295;Name=C9F09_29295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29295;pseudo=true PYKB01001683.1 Protein Homology CDS 2584 3387 . + 0 ID=cds-C9F09_29295;Parent=gene-C9F09_29295;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001714675.1;locus_tag=C9F09_29295;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001705.1 1 3462 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001705.1 Genbank region 1 3462 . + . ID=PYKB01001705.1:1..3462;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001705.1 Genbank gene 446 1429 . - . ID=gene-C9F09_29810;Name=C9F09_29810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29810 PYKB01001705.1 Protein Homology CDS 446 1429 . - 0 ID=cds-TGC71839.1;Parent=gene-C9F09_29810;Dbxref=NCBI_GP:TGC71839.1;Name=TGC71839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=C9F09_29810;product=zinc transporter ZntB;protein_id=TGC71839.1;transl_table=11 PYKB01001705.1 Genbank gene 1575 2729 . - . ID=gene-C9F09_29815;Name=C9F09_29815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29815 PYKB01001705.1 Protein Homology CDS 1575 2729 . - 0 ID=cds-TGC71840.1;Parent=gene-C9F09_29815;Dbxref=NCBI_GP:TGC71840.1;Name=TGC71840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210139.1;locus_tag=C9F09_29815;product=chemoreceptor protein;protein_id=TGC71840.1;transl_table=11 PYKB01001705.1 Genbank gene 3122 3462 . - . ID=gene-C9F09_29820;Name=C9F09_29820;end_range=3462,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29820;partial=true PYKB01001705.1 Protein Homology CDS 3122 3462 . - 2 ID=cds-TGC71841.1;Parent=gene-C9F09_29820;Dbxref=NCBI_GP:TGC71841.1;Name=TGC71841.1;end_range=3462,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455846.1;locus_tag=C9F09_29820;partial=true;product=DNA endonuclease SmrA;protein_id=TGC71841.1;transl_table=11 ##sequence-region PYKB01000724.1 1 3459 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000724.1 Genbank region 1 3459 . + . ID=PYKB01000724.1:1..3459;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000724.1 Genbank gene 651 1940 . + . ID=gene-C9F09_11080;Name=C9F09_11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11080 PYKB01000724.1 Protein Homology CDS 651 1940 . + 0 ID=cds-TGC93409.1;Parent=gene-C9F09_11080;Dbxref=NCBI_GP:TGC93409.1;Name=TGC93409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=C9F09_11080;product=HAAAP family serine/threonine permease;protein_id=TGC93409.1;transl_table=11 PYKB01000724.1 Genbank gene 1999 3366 . + . ID=gene-C9F09_11085;Name=C9F09_11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11085 PYKB01000724.1 Protein Homology CDS 1999 3366 . + 0 ID=cds-TGC93410.1;Parent=gene-C9F09_11085;Dbxref=NCBI_GP:TGC93410.1;Name=TGC93410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=C9F09_11085;product=L-serine ammonia-lyase;protein_id=TGC93410.1;transl_table=11 ##sequence-region PYKB01001106.1 1 3451 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001106.1 Genbank region 1 3451 . + . ID=PYKB01001106.1:1..3451;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001106.1 Genbank gene 190 1062 . - . ID=gene-C9F09_18540;Name=C9F09_18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18540 PYKB01001106.1 Protein Homology CDS 190 1062 . - 0 ID=cds-TGC85829.1;Parent=gene-C9F09_18540;Dbxref=NCBI_GP:TGC85829.1;Name=TGC85829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455957.1;locus_tag=C9F09_18540;product=LysR family transcriptional regulator;protein_id=TGC85829.1;transl_table=11 PYKB01001106.1 Genbank gene 1165 2553 . + . ID=gene-C9F09_18545;Name=C9F09_18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18545 PYKB01001106.1 Protein Homology CDS 1165 2553 . + 0 ID=cds-TGC85830.1;Parent=gene-C9F09_18545;Dbxref=NCBI_GP:TGC85830.1;Name=TGC85830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=C9F09_18545;product=succinate-semialdehyde dehydrogenase;protein_id=TGC85830.1;transl_table=11 PYKB01001106.1 Genbank gene 2626 3451 . + . ID=gene-C9F09_18550;Name=C9F09_18550;end_range=3451,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18550;partial=true PYKB01001106.1 Protein Homology CDS 2626 3451 . + 0 ID=cds-TGC85831.1;Parent=gene-C9F09_18550;Dbxref=NCBI_GP:TGC85831.1;Name=TGC85831.1;Note=catalyzes the formation of glutamate from glutamine;end_range=3451,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=C9F09_18550;partial=true;product=glutaminase;protein_id=TGC85831.1;transl_table=11 ##sequence-region PYKB01000129.1 1 3435 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000129.1 Genbank region 1 3435 . + . ID=PYKB01000129.1:1..3435;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000129.1 Genbank gene 1 1001 . - . ID=gene-C9F09_01465;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=C9F09_01465;partial=true;start_range=.,1 PYKB01000129.1 Protein Homology CDS 1 1001 . - 0 ID=cds-TGD04909.1;Parent=gene-C9F09_01465;Dbxref=NCBI_GP:TGD04909.1;Name=TGD04909.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=C9F09_01465;partial=true;product=NAD(P) transhydrogenase subunit beta;protein_id=TGD04909.1;start_range=.,1;transl_table=11 PYKB01000129.1 Genbank pseudogene 1012 2541 . - . ID=gene-C9F09_01470;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=pseudogene;locus_tag=C9F09_01470;pseudo=true PYKB01000129.1 Protein Homology CDS 1012 2541 . - 0 ID=cds-C9F09_01470;Parent=gene-C9F09_01470;Note=internal stop;gbkey=CDS;gene=pntA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456001.1;locus_tag=C9F09_01470;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha;pseudo=true;transl_table=11 PYKB01000129.1 Genbank gene 3068 3435 . + . ID=gene-C9F09_01475;Name=C9F09_01475;end_range=3435,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01475;partial=true PYKB01000129.1 Protein Homology CDS 3068 3435 . + 0 ID=cds-TGD04910.1;Parent=gene-C9F09_01475;Dbxref=NCBI_GP:TGD04910.1;Name=TGD04910.1;end_range=3435,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456002.1;locus_tag=C9F09_01475;partial=true;product=hypothetical protein;protein_id=TGD04910.1;transl_table=11 ##sequence-region PYKB01000604.1 1 11028 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000604.1 Genbank region 1 11028 . + . ID=PYKB01000604.1:1..11028;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000604.1 Genbank gene 1 643 . - . ID=gene-C9F09_08855;Name=C9F09_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08855;partial=true;start_range=.,1 PYKB01000604.1 Protein Homology CDS 1 643 . - 0 ID=cds-TGC95238.1;Parent=gene-C9F09_08855;Dbxref=NCBI_GP:TGC95238.1;Name=TGC95238.1;Note=catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=C9F09_08855;partial=true;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=TGC95238.1;start_range=.,1;transl_table=11 PYKB01000604.1 Genbank gene 675 950 . - . ID=gene-C9F09_08860;Name=C9F09_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08860 PYKB01000604.1 Protein Homology CDS 675 950 . - 0 ID=cds-TGC95239.1;Parent=gene-C9F09_08860;Dbxref=NCBI_GP:TGC95239.1;Name=TGC95239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=C9F09_08860;product=hypothetical protein;protein_id=TGC95239.1;transl_table=11 PYKB01000604.1 Genbank gene 1468 1869 . + . ID=gene-C9F09_08865;Name=steB;gbkey=Gene;gene=steB;gene_biotype=protein_coding;locus_tag=C9F09_08865 PYKB01000604.1 Protein Homology CDS 1468 1869 . + 0 ID=cds-TGC95240.1;Parent=gene-C9F09_08865;Dbxref=NCBI_GP:TGC95240.1;Name=TGC95240.1;gbkey=CDS;gene=steB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=C9F09_08865;product=type III secretion system effector SteB;protein_id=TGC95240.1;transl_table=11 PYKB01000604.1 Genbank gene 1998 2714 . - . ID=gene-C9F09_08870;Name=C9F09_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08870 PYKB01000604.1 Protein Homology CDS 1998 2714 . - 0 ID=cds-TGC95241.1;Parent=gene-C9F09_08870;Dbxref=NCBI_GP:TGC95241.1;Name=TGC95241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=C9F09_08870;product=hypothetical protein;protein_id=TGC95241.1;transl_table=11 PYKB01000604.1 Genbank gene 3140 4366 . + . ID=gene-C9F09_08875;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=C9F09_08875 PYKB01000604.1 Protein Homology CDS 3140 4366 . + 0 ID=cds-TGC95242.1;Parent=gene-C9F09_08875;Dbxref=NCBI_GP:TGC95242.1;Name=TGC95242.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=C9F09_08875;product=SPI-2 type III secretion system effector SseJ;protein_id=TGC95242.1;transl_table=11 PYKB01000604.1 Genbank gene 4487 4831 . - . ID=gene-C9F09_08880;Name=C9F09_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08880 PYKB01000604.1 Protein Homology CDS 4487 4831 . - 0 ID=cds-TGC95243.1;Parent=gene-C9F09_08880;Dbxref=NCBI_GP:TGC95243.1;Name=TGC95243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=C9F09_08880;product=DUF1294 domain-containing protein;protein_id=TGC95243.1;transl_table=11 PYKB01000604.1 Genbank gene 5741 6502 . + . ID=gene-C9F09_08885;Name=C9F09_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08885 PYKB01000604.1 Protein Homology CDS 5741 6502 . + 0 ID=cds-TGC95244.1;Parent=gene-C9F09_08885;Dbxref=NCBI_GP:TGC95244.1;Name=TGC95244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455871.1;locus_tag=C9F09_08885;product=amino acid-binding protein;protein_id=TGC95244.1;transl_table=11 PYKB01000604.1 Genbank gene 6509 7156 . + . ID=gene-C9F09_08890;Name=C9F09_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08890 PYKB01000604.1 Protein Homology CDS 6509 7156 . + 0 ID=cds-TGC95245.1;Parent=gene-C9F09_08890;Dbxref=NCBI_GP:TGC95245.1;Name=TGC95245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455870.1;locus_tag=C9F09_08890;product=amino acid ABC transporter permease;protein_id=TGC95245.1;transl_table=11 PYKB01000604.1 Genbank gene 7181 7912 . + . ID=gene-C9F09_08895;Name=C9F09_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08895 PYKB01000604.1 Protein Homology CDS 7181 7912 . + 0 ID=cds-TGC95246.1;Parent=gene-C9F09_08895;Dbxref=NCBI_GP:TGC95246.1;Name=TGC95246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460594.1;locus_tag=C9F09_08895;product=amino acid ABC transporter ATP-binding protein;protein_id=TGC95246.1;transl_table=11 PYKB01000604.1 Genbank gene 7909 8589 . + . ID=gene-C9F09_08900;Name=C9F09_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08900 PYKB01000604.1 Protein Homology CDS 7909 8589 . + 0 ID=cds-TGC95247.1;Parent=gene-C9F09_08900;Dbxref=NCBI_GP:TGC95247.1;Name=TGC95247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455868.1;locus_tag=C9F09_08900;product=amino acid ABC transporter permease;protein_id=TGC95247.1;transl_table=11 PYKB01000604.1 Genbank gene 8726 10276 . + . ID=gene-C9F09_08905;Name=C9F09_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08905 PYKB01000604.1 Protein Homology CDS 8726 10276 . + 0 ID=cds-TGC95248.1;Parent=gene-C9F09_08905;Dbxref=NCBI_GP:TGC95248.1;Name=TGC95248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=C9F09_08905;product=hypothetical protein;protein_id=TGC95248.1;transl_table=11 PYKB01000604.1 Genbank pseudogene 10740 10970 . + . ID=gene-C9F09_08910;Name=C9F09_08910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08910;pseudo=true PYKB01000604.1 Protein Homology CDS 10740 10970 . + 0 ID=cds-C9F09_08910;Parent=gene-C9F09_08910;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576082.1;locus_tag=C9F09_08910;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKB01000976.1 1 3433 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000976.1 Genbank region 1 3433 . + . ID=PYKB01000976.1:1..3433;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000976.1 Genbank pseudogene 66 527 . - . ID=gene-C9F09_16170;Name=C9F09_16170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16170;pseudo=true PYKB01000976.1 Protein Homology CDS 66 527 . - 0 ID=cds-C9F09_16170;Parent=gene-C9F09_16170;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003825482.1;locus_tag=C9F09_16170;product=5-formyltetrahydrofolate cyclo-ligase;pseudo=true;transl_table=11 PYKB01000976.1 Genbank gene 548 731 . - . ID=gene-C9F09_16175;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=C9F09_16175 PYKB01000976.1 cmsearch ncRNA 548 731 . - . ID=rna-C9F09_16175;Parent=gene-C9F09_16175;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00013,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_16175;product=6S RNA PYKB01000976.1 cmsearch exon 548 731 . - . ID=exon-C9F09_16175-1;Parent=rna-C9F09_16175;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00013,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_16175;product=6S RNA PYKB01000976.1 Genbank gene 773 1102 . - . ID=gene-C9F09_16180;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=C9F09_16180 PYKB01000976.1 Protein Homology CDS 773 1102 . - 0 ID=cds-TGC88758.1;Parent=gene-C9F09_16180;Dbxref=NCBI_GP:TGC88758.1;Name=TGC88758.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457458.1;locus_tag=C9F09_16180;product=cell division protein ZapA;protein_id=TGC88758.1;transl_table=11 PYKB01000976.1 Genbank pseudogene 1051 1239 . - . ID=gene-C9F09_16185;Name=C9F09_16185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16185;pseudo=true PYKB01000976.1 Protein Homology CDS 1051 1239 . - 0 ID=cds-C9F09_16185;Parent=gene-C9F09_16185;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001307994.1;locus_tag=C9F09_16185;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000976.1 Genbank gene 1263 1847 . + . ID=gene-C9F09_16190;Name=C9F09_16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16190 PYKB01000976.1 Protein Homology CDS 1263 1847 . + 0 ID=cds-TGC88759.1;Parent=gene-C9F09_16190;Dbxref=NCBI_GP:TGC88759.1;Name=TGC88759.1;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461975.3;locus_tag=C9F09_16190;product=YecA family protein;protein_id=TGC88759.1;transl_table=11 PYKB01000976.1 Genbank gene 1873 3189 . + . ID=gene-C9F09_16195;Name=C9F09_16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16195 PYKB01000976.1 Protein Homology CDS 1873 3189 . + 0 ID=cds-TGC88760.1;Parent=gene-C9F09_16195;Dbxref=NCBI_GP:TGC88760.1;Name=TGC88760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457456.1;locus_tag=C9F09_16195;product=Xaa-Pro aminopeptidase;protein_id=TGC88760.1;transl_table=11 PYKB01000976.1 Genbank gene 3186 3433 . + . ID=gene-C9F09_16200;Name=C9F09_16200;end_range=3433,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16200;partial=true PYKB01000976.1 Protein Homology CDS 3186 3433 . + 0 ID=cds-TGC88761.1;Parent=gene-C9F09_16200;Dbxref=NCBI_GP:TGC88761.1;Name=TGC88761.1;Note=Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone;end_range=3433,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457455.1;locus_tag=C9F09_16200;partial=true;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=TGC88761.1;transl_table=11 ##sequence-region PYKB01000147.1 1 3423 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000147.1 Genbank region 1 3423 . + . ID=PYKB01000147.1:1..3423;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000147.1 Genbank gene 1 481 . - . ID=gene-C9F09_01660;Name=C9F09_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01660;partial=true;start_range=.,1 PYKB01000147.1 Protein Homology CDS 1 481 . - 0 ID=cds-TGD04580.1;Parent=gene-C9F09_01660;Dbxref=NCBI_GP:TGD04580.1;Name=TGD04580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=C9F09_01660;partial=true;product=hypothetical protein;protein_id=TGD04580.1;start_range=.,1;transl_table=11 PYKB01000147.1 Genbank gene 490 858 . - . ID=gene-C9F09_01665;Name=C9F09_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01665 PYKB01000147.1 Protein Homology CDS 490 858 . - 0 ID=cds-TGD04581.1;Parent=gene-C9F09_01665;Dbxref=NCBI_GP:TGD04581.1;Name=TGD04581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=C9F09_01665;product=Fe-S cluster assembly scaffold SufA;protein_id=TGD04581.1;transl_table=11 PYKB01000147.1 Genbank gene 1285 2631 . + . ID=gene-C9F09_01670;Name=C9F09_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01670 PYKB01000147.1 Protein Homology CDS 1285 2631 . + 0 ID=cds-TGD04582.1;Parent=gene-C9F09_01670;Dbxref=NCBI_GP:TGD04582.1;Name=TGD04582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=C9F09_01670;product=L-cystine transporter;protein_id=TGD04582.1;transl_table=11 PYKB01000147.1 Genbank gene 2919 3146 . - . ID=gene-C9F09_01675;Name=C9F09_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01675 PYKB01000147.1 Protein Homology CDS 2919 3146 . - 0 ID=cds-TGD04583.1;Parent=gene-C9F09_01675;Dbxref=NCBI_GP:TGD04583.1;Name=TGD04583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460332.1;locus_tag=C9F09_01675;product=hypothetical protein;protein_id=TGD04583.1;transl_table=11 PYKB01000147.1 Genbank pseudogene 3206 3325 . - . ID=gene-C9F09_01680;Name=C9F09_01680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01680;pseudo=true PYKB01000147.1 Protein Homology CDS 3206 3325 . - 0 ID=cds-C9F09_01680;Parent=gene-C9F09_01680;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456158.1;locus_tag=C9F09_01680;product=esterase;pseudo=true;transl_table=11 ##sequence-region PYKB01000241.1 1 3420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000241.1 Genbank region 1 3420 . + . ID=PYKB01000241.1:1..3420;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000241.1 Genbank pseudogene 55 939 . - . ID=gene-C9F09_02600;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=pseudogene;locus_tag=C9F09_02600;pseudo=true PYKB01000241.1 Protein Homology CDS 55 939 . - 0 ID=cds-C9F09_02600;Parent=gene-C9F09_02600;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=chiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455248.1;locus_tag=C9F09_02600;product=chitoporin;pseudo=true;transl_table=11 PYKB01000241.1 Genbank gene 1067 1252 . - . ID=gene-C9F09_02605;Name=C9F09_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02605 PYKB01000241.1 Protein Homology CDS 1067 1252 . - 0 ID=cds-TGD02731.1;Parent=gene-C9F09_02605;Dbxref=NCBI_GP:TGD02731.1;Name=TGD02731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001330082.1;locus_tag=C9F09_02605;product=hypothetical protein;protein_id=TGD02731.1;transl_table=11 PYKB01000241.1 Genbank gene 1391 3058 . - . ID=gene-C9F09_02610;Name=C9F09_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02610 PYKB01000241.1 Protein Homology CDS 1391 3058 . - 0 ID=cds-TGD02732.1;Parent=gene-C9F09_02610;Dbxref=NCBI_GP:TGD02732.1;Name=TGD02732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=C9F09_02610;product=glutamine--tRNA ligase;protein_id=TGD02732.1;transl_table=11 ##sequence-region PYKB01000905.1 1 3402 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000905.1 Genbank region 1 3402 . + . ID=PYKB01000905.1:1..3402;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000905.1 Genbank gene 1 914 . - . ID=gene-C9F09_14890;Name=C9F09_14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14890;partial=true;start_range=.,1 PYKB01000905.1 Protein Homology CDS 1 914 . - 0 ID=cds-TGC90092.1;Parent=gene-C9F09_14890;Dbxref=NCBI_GP:TGC90092.1;Name=TGC90092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=C9F09_14890;partial=true;product=hypothetical protein;protein_id=TGC90092.1;start_range=.,1;transl_table=11 PYKB01000905.1 Genbank gene 1149 2273 . - . ID=gene-C9F09_14895;Name=C9F09_14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14895 PYKB01000905.1 Protein Homology CDS 1149 2273 . - 0 ID=cds-TGC90090.1;Parent=gene-C9F09_14895;Dbxref=NCBI_GP:TGC90090.1;Name=TGC90090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=C9F09_14895;product=cytoplasmic protein;protein_id=TGC90090.1;transl_table=11 PYKB01000905.1 Genbank gene 2409 3402 . + . ID=gene-C9F09_14900;Name=C9F09_14900;end_range=3402,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14900;partial=true PYKB01000905.1 Protein Homology CDS 2409 3402 . + 0 ID=cds-TGC90091.1;Parent=gene-C9F09_14900;Dbxref=NCBI_GP:TGC90091.1;Name=TGC90091.1;end_range=3402,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457950.1;locus_tag=C9F09_14900;partial=true;product=multifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase;protein_id=TGC90091.1;transl_table=11 ##sequence-region PYKB01001420.1 1 3395 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001420.1 Genbank region 1 3395 . + . ID=PYKB01001420.1:1..3395;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001420.1 Genbank gene 33 1406 . + . ID=gene-C9F09_24415;Name=C9F09_24415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24415 PYKB01001420.1 Protein Homology CDS 33 1406 . + 0 ID=cds-TGC79019.1;Parent=gene-C9F09_24415;Dbxref=NCBI_GP:TGC79019.1;Name=TGC79019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001512351.1;locus_tag=C9F09_24415;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=TGC79019.1;transl_table=11 PYKB01001420.1 Genbank gene 1403 2761 . + . ID=gene-C9F09_24420;Name=C9F09_24420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24420 PYKB01001420.1 Protein Homology CDS 1403 2761 . + 0 ID=cds-TGC79018.1;Parent=gene-C9F09_24420;Dbxref=NCBI_GP:TGC79018.1;Name=TGC79018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=C9F09_24420;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=TGC79018.1;transl_table=11 PYKB01001420.1 Genbank pseudogene 2755 3360 . + . ID=gene-C9F09_24425;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=pseudogene;locus_tag=C9F09_24425;pseudo=true PYKB01001420.1 Protein Homology CDS 2755 3360 . + 0 ID=cds-C9F09_24425;Parent=gene-C9F09_24425;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=mraY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=C9F09_24425;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;pseudo=true;transl_table=11 ##sequence-region PYKB01000258.1 1 3383 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000258.1 Genbank region 1 3383 . + . ID=PYKB01000258.1:1..3383;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000258.1 Genbank gene 1 329 . + . ID=gene-C9F09_02815;Name=C9F09_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02815;partial=true;start_range=.,1 PYKB01000258.1 Protein Homology CDS 1 329 . + 2 ID=cds-TGD02394.1;Parent=gene-C9F09_02815;Dbxref=NCBI_GP:TGD02394.1;Name=TGD02394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455631.1;locus_tag=C9F09_02815;partial=true;product=molecular chaperone;protein_id=TGD02394.1;start_range=.,1;transl_table=11 PYKB01000258.1 Genbank gene 382 912 . + . ID=gene-C9F09_02820;Name=C9F09_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02820 PYKB01000258.1 Protein Homology CDS 382 912 . + 0 ID=cds-TGD02395.1;Parent=gene-C9F09_02820;Dbxref=NCBI_GP:TGD02395.1;Name=TGD02395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455632.1;locus_tag=C9F09_02820;product=DUF1097 domain-containing protein;protein_id=TGD02395.1;transl_table=11 PYKB01000258.1 Genbank pseudogene 949 1053 . + . ID=gene-C9F09_02825;Name=C9F09_02825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02825;pseudo=true PYKB01000258.1 Protein Homology CDS 949 1053 . + 0 ID=cds-C9F09_02825;Parent=gene-C9F09_02825;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001348187.1;locus_tag=C9F09_02825;product=MFS transporter;pseudo=true;transl_table=11 PYKB01000258.1 Genbank gene 1020 1478 . - . ID=gene-C9F09_02830;Name=C9F09_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02830 PYKB01000258.1 Protein Homology CDS 1020 1478 . - 0 ID=cds-TGD02396.1;Parent=gene-C9F09_02830;Dbxref=NCBI_GP:TGD02396.1;Name=TGD02396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454994.1;locus_tag=C9F09_02830;product=IS200/IS605 family transposase IS200F;protein_id=TGD02396.1;transl_table=11 PYKB01000258.1 Genbank gene 1435 1617 . - . ID=gene-C9F09_02835;Name=C9F09_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02835 PYKB01000258.1 Protein Homology CDS 1435 1617 . - 0 ID=cds-TGD02397.1;Parent=gene-C9F09_02835;Dbxref=NCBI_GP:TGD02397.1;Name=TGD02397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008479690.1;locus_tag=C9F09_02835;product=hypothetical protein;protein_id=TGD02397.1;transl_table=11 PYKB01000258.1 Genbank gene 1662 2495 . - . ID=gene-C9F09_02840;Name=C9F09_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02840 PYKB01000258.1 Protein Homology CDS 1662 2495 . - 0 ID=cds-TGD02398.1;Parent=gene-C9F09_02840;Dbxref=NCBI_GP:TGD02398.1;Name=TGD02398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455633.1;locus_tag=C9F09_02840;product=curli production assembly/transport component CsgG;protein_id=TGD02398.1;transl_table=11 PYKB01000258.1 Genbank gene 2522 2938 . - . ID=gene-C9F09_02845;Name=C9F09_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02845 PYKB01000258.1 Protein Homology CDS 2522 2938 . - 0 ID=cds-TGD02399.1;Parent=gene-C9F09_02845;Dbxref=NCBI_GP:TGD02399.1;Name=TGD02399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455634.1;locus_tag=C9F09_02845;product=curli production assembly/transport component CsgF;protein_id=TGD02399.1;transl_table=11 PYKB01000258.1 Genbank gene 2965 3360 . - . ID=gene-C9F09_02850;Name=C9F09_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02850 PYKB01000258.1 Protein Homology CDS 2965 3360 . - 0 ID=cds-TGD02400.1;Parent=gene-C9F09_02850;Dbxref=NCBI_GP:TGD02400.1;Name=TGD02400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455635.1;locus_tag=C9F09_02850;product=curli production assembly/transport component CsgE;protein_id=TGD02400.1;transl_table=11 ##sequence-region PYKB01000806.1 1 3382 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000806.1 Genbank region 1 3382 . + . ID=PYKB01000806.1:1..3382;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000806.1 Genbank gene 1 1348 . + . ID=gene-C9F09_12570;Name=C9F09_12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12570;partial=true;start_range=.,1 PYKB01000806.1 Protein Homology CDS 1 1348 . + 1 ID=cds-TGC92055.1;Parent=gene-C9F09_12570;Dbxref=NCBI_GP:TGC92055.1;Name=TGC92055.1;Note=phosphorylates the response regulator SsrB%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=C9F09_12570;partial=true;product=hybrid sensor histidine kinase/response regulator;protein_id=TGC92055.1;start_range=.,1;transl_table=11 PYKB01000806.1 Genbank gene 1379 2017 . + . ID=gene-C9F09_12575;Name=C9F09_12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12575 PYKB01000806.1 Protein Homology CDS 1379 2017 . + 0 ID=cds-TGC92056.1;Parent=gene-C9F09_12575;Dbxref=NCBI_GP:TGC92056.1;Name=TGC92056.1;Note=is phosphorylated by SsrA%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456137.1;locus_tag=C9F09_12575;product=DNA-binding response regulator;protein_id=TGC92056.1;transl_table=11 PYKB01000806.1 Genbank gene 2196 2924 . + . ID=gene-C9F09_12580;Name=C9F09_12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12580 PYKB01000806.1 Protein Homology CDS 2196 2924 . + 0 ID=cds-TGC92057.1;Parent=gene-C9F09_12580;Dbxref=NCBI_GP:TGC92057.1;Name=TGC92057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456138.1;locus_tag=C9F09_12580;product=helix-turn-helix-type transcriptional regulator;protein_id=TGC92057.1;transl_table=11 PYKB01000806.1 Genbank pseudogene 3096 3359 . + . ID=gene-C9F09_12585;Name=C9F09_12585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12585;pseudo=true PYKB01000806.1 Protein Homology CDS 3096 3359 . + 0 ID=cds-C9F09_12585;Parent=gene-C9F09_12585;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907727.1;locus_tag=C9F09_12585;product=DUF1722 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001588.1 1 3376 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001588.1 Genbank region 1 3376 . + . ID=PYKB01001588.1:1..3376;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001588.1 Genbank gene 1 570 . + . ID=gene-C9F09_27895;Name=C9F09_27895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27895;partial=true;start_range=.,1 PYKB01001588.1 Protein Homology CDS 1 570 . + 0 ID=cds-TGC75086.1;Parent=gene-C9F09_27895;Dbxref=NCBI_GP:TGC75086.1;Name=TGC75086.1;Note=cytochrome c-type biogenesis protein%3B involved in the attachment of heme to cytochrome c;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=C9F09_27895;partial=true;product=cytochrome c biogenesis protein CcmH;protein_id=TGC75086.1;start_range=.,1;transl_table=11 PYKB01001588.1 Genbank gene 692 1918 . + . ID=gene-C9F09_27900;Name=C9F09_27900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27900 PYKB01001588.1 Protein Homology CDS 692 1918 . + 0 ID=cds-TGC75087.1;Parent=gene-C9F09_27900;Dbxref=NCBI_GP:TGC75087.1;Name=TGC75087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458128.1;locus_tag=C9F09_27900;product=DUF3748 domain-containing protein;protein_id=TGC75087.1;transl_table=11 PYKB01001588.1 Genbank gene 1920 2252 . - . ID=gene-C9F09_27905;Name=C9F09_27905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27905 PYKB01001588.1 Protein Homology CDS 1920 2252 . - 0 ID=cds-TGC75088.1;Parent=gene-C9F09_27905;Dbxref=NCBI_GP:TGC75088.1;Name=TGC75088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=C9F09_27905;product=YceK/YidQ family lipoprotein;protein_id=TGC75088.1;transl_table=11 PYKB01001588.1 Genbank gene 2562 2975 . + . ID=gene-C9F09_27910;Name=C9F09_27910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27910 PYKB01001588.1 Protein Homology CDS 2562 2975 . + 0 ID=cds-TGC75089.1;Parent=gene-C9F09_27910;Dbxref=NCBI_GP:TGC75089.1;Name=TGC75089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=C9F09_27910;product=heat shock protein IbpA;protein_id=TGC75089.1;transl_table=11 PYKB01001588.1 Genbank gene 3085 3376 . + . ID=gene-C9F09_27915;Name=ibpB;end_range=3376,.;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=C9F09_27915;partial=true PYKB01001588.1 Protein Homology CDS 3085 3376 . + 0 ID=cds-TGC75090.1;Parent=gene-C9F09_27915;Dbxref=NCBI_GP:TGC75090.1;Name=TGC75090.1;end_range=3376,.;gbkey=CDS;gene=ibpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458131.1;locus_tag=C9F09_27915;partial=true;product=heat shock chaperone IbpB;protein_id=TGC75090.1;transl_table=11 ##sequence-region PYKB01000027.1 1 3350 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000027.1 Genbank region 1 3350 . + . ID=PYKB01000027.1:1..3350;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000027.1 Genbank gene 394 1194 . + . ID=gene-C9F09_00310;Name=C9F09_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00310 PYKB01000027.1 Protein Homology CDS 394 1194 . + 0 ID=cds-TGD06907.1;Parent=gene-C9F09_00310;Dbxref=NCBI_GP:TGD06907.1;Name=TGD06907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=C9F09_00310;product=glucosamine-6-phosphate deaminase;protein_id=TGD06907.1;transl_table=11 PYKB01000027.1 Genbank gene 1254 2408 . + . ID=gene-C9F09_00315;Name=C9F09_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00315 PYKB01000027.1 Protein Homology CDS 1254 2408 . + 0 ID=cds-TGD06908.1;Parent=gene-C9F09_00315;Dbxref=NCBI_GP:TGD06908.1;Name=TGD06908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=C9F09_00315;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=TGD06908.1;transl_table=11 PYKB01000027.1 Genbank gene 2413 3350 . + . ID=gene-C9F09_00320;Name=C9F09_00320;end_range=3350,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00320;partial=true PYKB01000027.1 Protein Homology CDS 2413 3350 . + 0 ID=cds-TGD06909.1;Parent=gene-C9F09_00320;Dbxref=NCBI_GP:TGD06909.1;Name=TGD06909.1;Note=regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon;end_range=3350,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455243.1;locus_tag=C9F09_00320;partial=true;product=transcriptional regulator;protein_id=TGD06909.1;transl_table=11 ##sequence-region PYKB01001612.1 1 3348 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001612.1 Genbank region 1 3348 . + . ID=PYKB01001612.1:1..3348;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001612.1 Genbank pseudogene 94 411 . + . ID=gene-C9F09_28240;Name=C9F09_28240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28240;pseudo=true PYKB01001612.1 Protein Homology CDS 94 411 . + 0 ID=cds-C9F09_28240;Parent=gene-C9F09_28240;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457088.1;locus_tag=C9F09_28240;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001612.1 Genbank gene 494 2638 . + . ID=gene-C9F09_28245;Name=C9F09_28245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28245 PYKB01001612.1 Protein Homology CDS 494 2638 . + 0 ID=cds-TGC74646.1;Parent=gene-C9F09_28245;Dbxref=NCBI_GP:TGC74646.1;Name=TGC74646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457089.1;locus_tag=C9F09_28245;product=lysine decarboxylase CadA;protein_id=TGC74646.1;transl_table=11 PYKB01001612.1 Genbank gene 2694 3348 . + . ID=gene-C9F09_28250;Name=C9F09_28250;end_range=3348,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28250;partial=true PYKB01001612.1 Protein Homology CDS 2694 3348 . + 0 ID=cds-TGC74647.1;Parent=gene-C9F09_28250;Dbxref=NCBI_GP:TGC74647.1;Name=TGC74647.1;end_range=3348,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457090.1;locus_tag=C9F09_28250;partial=true;product=MFS transporter;protein_id=TGC74647.1;transl_table=11 ##sequence-region PYKB01001183.1 1 11011 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001183.1 Genbank region 1 11011 . + . ID=PYKB01001183.1:1..11011;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001183.1 Genbank gene 1 793 . + . ID=gene-C9F09_20085;Name=C9F09_20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20085;partial=true;start_range=.,1 PYKB01001183.1 Protein Homology CDS 1 793 . + 1 ID=cds-TGC83952.1;Parent=gene-C9F09_20085;Dbxref=NCBI_GP:TGC83952.1;Name=TGC83952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459917.1;locus_tag=C9F09_20085;partial=true;product=DUF535 domain-containing protein;protein_id=TGC83952.1;start_range=.,1;transl_table=11 PYKB01001183.1 Genbank gene 790 2448 . - . ID=gene-C9F09_20090;Name=C9F09_20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20090 PYKB01001183.1 Protein Homology CDS 790 2448 . - 0 ID=cds-TGC83953.1;Parent=gene-C9F09_20090;Dbxref=NCBI_GP:TGC83953.1;Name=TGC83953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=C9F09_20090;product=ATP-dependent endonuclease;protein_id=TGC83953.1;transl_table=11 PYKB01001183.1 Genbank gene 2484 2672 . - . ID=gene-C9F09_20095;Name=C9F09_20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20095 PYKB01001183.1 Protein Homology CDS 2484 2672 . - 0 ID=cds-TGC83961.1;Parent=gene-C9F09_20095;Dbxref=NCBI_GP:TGC83961.1;Name=TGC83961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218990.1;locus_tag=C9F09_20095;product=hypothetical protein;protein_id=TGC83961.1;transl_table=11 PYKB01001183.1 Genbank gene 2650 3549 . + . ID=gene-C9F09_20100;Name=C9F09_20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20100 PYKB01001183.1 Protein Homology CDS 2650 3549 . + 0 ID=cds-TGC83954.1;Parent=gene-C9F09_20100;Dbxref=NCBI_GP:TGC83954.1;Name=TGC83954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=C9F09_20100;product=hypothetical protein;protein_id=TGC83954.1;transl_table=11 PYKB01001183.1 Genbank gene 3693 5345 . + . ID=gene-C9F09_20105;Name=C9F09_20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20105 PYKB01001183.1 Protein Homology CDS 3693 5345 . + 0 ID=cds-TGC83955.1;Parent=gene-C9F09_20105;Dbxref=NCBI_GP:TGC83955.1;Name=TGC83955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=C9F09_20105;product=hydroxylamine reductase;protein_id=TGC83955.1;transl_table=11 PYKB01001183.1 Genbank gene 5357 6325 . + . ID=gene-C9F09_20110;Name=C9F09_20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20110 PYKB01001183.1 Protein Homology CDS 5357 6325 . + 0 ID=cds-TGC83956.1;Parent=gene-C9F09_20110;Dbxref=NCBI_GP:TGC83956.1;Name=TGC83956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001522746.1;locus_tag=C9F09_20110;product=NADH oxidoreductase;protein_id=TGC83956.1;transl_table=11 PYKB01001183.1 Genbank gene 6483 8201 . + . ID=gene-C9F09_20115;Name=C9F09_20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20115 PYKB01001183.1 Protein Homology CDS 6483 8201 . + 0 ID=cds-TGC83957.1;Parent=gene-C9F09_20115;Dbxref=NCBI_GP:TGC83957.1;Name=TGC83957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532507.1;locus_tag=C9F09_20115;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=TGC83957.1;transl_table=11 PYKB01001183.1 Genbank gene 8240 9241 . + . ID=gene-C9F09_20120;Name=C9F09_20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20120 PYKB01001183.1 Protein Homology CDS 8240 9241 . + 0 ID=cds-TGC83958.1;Parent=gene-C9F09_20120;Dbxref=NCBI_GP:TGC83958.1;Name=TGC83958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=C9F09_20120;product=low-specificity L-threonine aldolase;protein_id=TGC83958.1;transl_table=11 PYKB01001183.1 Genbank gene 9252 10685 . + . ID=gene-C9F09_20125;Name=C9F09_20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20125 PYKB01001183.1 Protein Homology CDS 9252 10685 . + 0 ID=cds-TGC83959.1;Parent=gene-C9F09_20125;Dbxref=NCBI_GP:TGC83959.1;Name=TGC83959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455423.1;locus_tag=C9F09_20125;product=NAD(P)-dependent oxidoreductase;protein_id=TGC83959.1;transl_table=11 PYKB01001183.1 Genbank gene 10781 11011 . + . ID=gene-C9F09_20130;Name=C9F09_20130;end_range=11011,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20130;partial=true PYKB01001183.1 Protein Homology CDS 10781 11011 . + 0 ID=cds-TGC83960.1;Parent=gene-C9F09_20130;Dbxref=NCBI_GP:TGC83960.1;Name=TGC83960.1;end_range=11011,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455422.1;locus_tag=C9F09_20130;partial=true;product=hypothetical protein;protein_id=TGC83960.1;transl_table=11 ##sequence-region PYKB01000977.1 1 3312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000977.1 Genbank region 1 3312 . + . ID=PYKB01000977.1:1..3312;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000977.1 Genbank gene 1 1825 . + . ID=gene-C9F09_16205;Name=C9F09_16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16205;partial=true;start_range=.,1 PYKB01000977.1 Protein Homology CDS 1 1825 . + 1 ID=cds-TGC88714.1;Parent=gene-C9F09_16205;Dbxref=NCBI_GP:TGC88714.1;Name=TGC88714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=C9F09_16205;partial=true;product=mechanosensitive channel MscK;protein_id=TGC88714.1;start_range=.,1;transl_table=11 PYKB01000977.1 Genbank pseudogene 1867 2361 . - . ID=gene-C9F09_16210;Name=C9F09_16210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16210;pseudo=true PYKB01000977.1 Protein Homology CDS 1867 2361 . - 0 ID=cds-C9F09_16210;Parent=gene-C9F09_16210;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=C9F09_16210;product=transposase;pseudo=true;transl_table=11 PYKB01000977.1 Genbank pseudogene 2481 2927 . - . ID=gene-C9F09_16215;Name=C9F09_16215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16215;pseudo=true PYKB01000977.1 Protein Homology CDS 2481 2927 . - 0 ID=cds-C9F09_16215;Parent=gene-C9F09_16215;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=C9F09_16215;product=transposase;pseudo=true;transl_table=11 PYKB01000977.1 Genbank gene 2997 3164 . - . ID=gene-C9F09_16220;Name=C9F09_16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16220 PYKB01000977.1 Protein Homology CDS 2997 3164 . - 0 ID=cds-TGC88715.1;Parent=gene-C9F09_16220;Dbxref=NCBI_GP:TGC88715.1;Name=TGC88715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455077.1;locus_tag=C9F09_16220;product=DUF2496 domain-containing protein;protein_id=TGC88715.1;transl_table=11 PYKB01000977.1 Genbank gene 3178 3312 . - . ID=gene-C9F09_16225;Name=C9F09_16225;end_range=3312,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16225;partial=true PYKB01000977.1 GeneMarkS+ CDS 3178 3312 . - 0 ID=cds-TGC88716.1;Parent=gene-C9F09_16225;Dbxref=NCBI_GP:TGC88716.1;Name=TGC88716.1;Note=PriC%3B protein involved in DNA replication%3B part of the primosome%2C a protein complex required to restart stalled replication forks%3B binds the complex formed by PriA%2C PriB and DNA%3B PriC-dependent primosome requires a gap to restart DNA replication%3B stimulates Rep activity at stalled forks;end_range=3312,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_16225;partial=true;product=primosomal replication protein N'';protein_id=TGC88716.1;transl_table=11 ##sequence-region PYKB01001439.1 1 3300 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001439.1 Genbank region 1 3300 . + . ID=PYKB01001439.1:1..3300;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001439.1 Genbank gene 1 100 . - . ID=gene-C9F09_24855;Name=C9F09_24855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24855;partial=true;start_range=.,1 PYKB01001439.1 Protein Homology CDS 1 100 . - 0 ID=cds-TGC78563.1;Parent=gene-C9F09_24855;Dbxref=NCBI_GP:TGC78563.1;Name=TGC78563.1;Note=metalloprotease;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310566.1;locus_tag=C9F09_24855;partial=true;product=protease HtpX;protein_id=TGC78563.1;start_range=.,1;transl_table=11 PYKB01001439.1 Genbank gene 294 2342 . - . ID=gene-C9F09_24860;Name=C9F09_24860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24860 PYKB01001439.1 Protein Homology CDS 294 2342 . - 0 ID=cds-TGC78561.1;Parent=gene-C9F09_24860;Dbxref=NCBI_GP:TGC78561.1;Name=TGC78561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=C9F09_24860;product=carboxy terminal-processing peptidase;protein_id=TGC78561.1;transl_table=11 PYKB01001439.1 Genbank gene 2362 3048 . - . ID=gene-C9F09_24865;Name=C9F09_24865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24865 PYKB01001439.1 Protein Homology CDS 2362 3048 . - 0 ID=cds-TGC78562.1;Parent=gene-C9F09_24865;Dbxref=NCBI_GP:TGC78562.1;Name=TGC78562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456351.1;locus_tag=C9F09_24865;product=RNA chaperone ProQ;protein_id=TGC78562.1;transl_table=11 ##sequence-region PYKB01000714.1 1 3289 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000714.1 Genbank region 1 3289 . + . ID=PYKB01000714.1:1..3289;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000714.1 Genbank pseudogene 77 553 . + . ID=gene-C9F09_10890;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=pseudogene;locus_tag=C9F09_10890;pseudo=true PYKB01000714.1 Protein Homology CDS 77 553 . + 0 ID=cds-C9F09_10890;Parent=gene-C9F09_10890;Note=catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=cyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457812.1;locus_tag=C9F09_10890;product=adenylate cyclase;pseudo=true;transl_table=11 PYKB01000714.1 Genbank gene 631 951 . - . ID=gene-C9F09_10895;Name=C9F09_10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10895 PYKB01000714.1 Protein Homology CDS 631 951 . - 0 ID=cds-TGC93519.1;Parent=gene-C9F09_10895;Dbxref=NCBI_GP:TGC93519.1;Name=TGC93519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=C9F09_10895;product=iron donor protein CyaY;protein_id=TGC93519.1;transl_table=11 PYKB01000714.1 Genbank gene 1021 1410 . - . ID=gene-C9F09_10900;Name=C9F09_10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10900 PYKB01000714.1 Protein Homology CDS 1021 1410 . - 0 ID=cds-TGC93520.1;Parent=gene-C9F09_10900;Dbxref=NCBI_GP:TGC93520.1;Name=TGC93520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=C9F09_10900;product=hypothetical protein;protein_id=TGC93520.1;transl_table=11 PYKB01000714.1 Genbank gene 1398 1631 . - . ID=gene-C9F09_10905;Name=C9F09_10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10905 PYKB01000714.1 Protein Homology CDS 1398 1631 . - 0 ID=cds-TGC93521.1;Parent=gene-C9F09_10905;Dbxref=NCBI_GP:TGC93521.1;Name=TGC93521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001205709.1;locus_tag=C9F09_10905;product=hypothetical protein;protein_id=TGC93521.1;transl_table=11 PYKB01000714.1 Genbank gene 1670 1921 . - . ID=gene-C9F09_10910;Name=C9F09_10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10910 PYKB01000714.1 Protein Homology CDS 1670 1921 . - 0 ID=cds-TGC93522.1;Parent=gene-C9F09_10910;Dbxref=NCBI_GP:TGC93522.1;Name=TGC93522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541792.1;locus_tag=C9F09_10910;product=hypothetical protein;protein_id=TGC93522.1;transl_table=11 PYKB01000714.1 Genbank gene 2107 2310 . + . ID=gene-C9F09_10915;Name=C9F09_10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10915 PYKB01000714.1 Protein Homology CDS 2107 2310 . + 0 ID=cds-TGC93523.1;Parent=gene-C9F09_10915;Dbxref=NCBI_GP:TGC93523.1;Name=TGC93523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457805.1;locus_tag=C9F09_10915;product=lipoprotein;protein_id=TGC93523.1;transl_table=11 PYKB01000714.1 Genbank gene 2347 3171 . + . ID=gene-C9F09_10920;Name=C9F09_10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10920 PYKB01000714.1 Protein Homology CDS 2347 3171 . + 0 ID=cds-TGC93524.1;Parent=gene-C9F09_10920;Dbxref=NCBI_GP:TGC93524.1;Name=TGC93524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=C9F09_10920;product=diaminopimelate epimerase;protein_id=TGC93524.1;transl_table=11 PYKB01000714.1 Genbank gene 3168 3289 . + . ID=gene-C9F09_10925;Name=C9F09_10925;end_range=3289,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10925;partial=true PYKB01000714.1 Protein Homology CDS 3168 3289 . + 0 ID=cds-TGC93525.1;Parent=gene-C9F09_10925;Dbxref=NCBI_GP:TGC93525.1;Name=TGC93525.1;end_range=3289,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457803.1;locus_tag=C9F09_10925;partial=true;product=DUF484 family protein;protein_id=TGC93525.1;transl_table=11 ##sequence-region PYKB01000821.1 1 3288 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000821.1 Genbank region 1 3288 . + . ID=PYKB01000821.1:1..3288;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000821.1 Genbank gene 13 207 . + . ID=gene-C9F09_12935;Name=C9F09_12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12935 PYKB01000821.1 Protein Homology CDS 13 207 . + 0 ID=cds-TGC91788.1;Parent=gene-C9F09_12935;Dbxref=NCBI_GP:TGC91788.1;Name=TGC91788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002953978.1;locus_tag=C9F09_12935;product=phosphomannomutase;protein_id=TGC91788.1;transl_table=11 PYKB01000821.1 Genbank gene 261 1655 . + . ID=gene-C9F09_12940;Name=C9F09_12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12940 PYKB01000821.1 Protein Homology CDS 261 1655 . + 0 ID=cds-TGC91786.1;Parent=gene-C9F09_12940;Dbxref=NCBI_GP:TGC91786.1;Name=TGC91786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=C9F09_12940;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=TGC91786.1;transl_table=11 PYKB01000821.1 Genbank gene 1757 3235 . + . ID=gene-C9F09_12945;Name=C9F09_12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12945 PYKB01000821.1 Protein Homology CDS 1757 3235 . + 0 ID=cds-TGC91787.1;Parent=gene-C9F09_12945;Dbxref=NCBI_GP:TGC91787.1;Name=TGC91787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=C9F09_12945;product=colanic acid exporter;protein_id=TGC91787.1;transl_table=11 ##sequence-region PYKB01000577.1 1 3286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000577.1 Genbank region 1 3286 . + . ID=PYKB01000577.1:1..3286;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000577.1 Genbank gene 10 639 . + . ID=gene-C9F09_08205;Name=C9F09_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08205 PYKB01000577.1 Protein Homology CDS 10 639 . + 0 ID=cds-TGC95902.1;Parent=gene-C9F09_08205;Dbxref=NCBI_GP:TGC95902.1;Name=TGC95902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001639200.1;locus_tag=C9F09_08205;product=trimethylamine-N-oxide reductase;protein_id=TGC95902.1;transl_table=11 PYKB01000577.1 Genbank gene 608 1048 . - . ID=gene-C9F09_08210;Name=C9F09_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08210 PYKB01000577.1 Protein Homology CDS 608 1048 . - 0 ID=cds-TGC95899.1;Parent=gene-C9F09_08210;Dbxref=NCBI_GP:TGC95899.1;Name=TGC95899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=C9F09_08210;product=N-acetyltransferase;protein_id=TGC95899.1;transl_table=11 PYKB01000577.1 Genbank gene 1026 1607 . - . ID=gene-C9F09_08215;Name=C9F09_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08215 PYKB01000577.1 Protein Homology CDS 1026 1607 . - 0 ID=cds-TGC95900.1;Parent=gene-C9F09_08215;Dbxref=NCBI_GP:TGC95900.1;Name=TGC95900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=C9F09_08215;product=DNA-3-methyladenine glycosylase I;protein_id=TGC95900.1;transl_table=11 PYKB01000577.1 Genbank gene 1764 2468 . + . ID=gene-C9F09_08220;Name=C9F09_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08220 PYKB01000577.1 Protein Homology CDS 1764 2468 . + 0 ID=cds-TGC95901.1;Parent=gene-C9F09_08220;Dbxref=NCBI_GP:TGC95901.1;Name=TGC95901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458284.1;locus_tag=C9F09_08220;product=autotransporter domain-containing protein;protein_id=TGC95901.1;transl_table=11 PYKB01000577.1 Genbank pseudogene 2699 3229 . + . ID=gene-C9F09_08225;Name=C9F09_08225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08225;pseudo=true PYKB01000577.1 Protein Homology CDS 2699 3229 . + 0 ID=cds-C9F09_08225;Parent=gene-C9F09_08225;Note=catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=C9F09_08225;product=lipid A phosphoethanolamine transferase;pseudo=true;transl_table=11 ##sequence-region PYKB01001424.1 1 3284 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001424.1 Genbank region 1 3284 . + . ID=PYKB01001424.1:1..3284;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001424.1 Genbank gene 1 490 . - . ID=gene-C9F09_24515;Name=C9F09_24515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24515;partial=true;start_range=.,1 PYKB01001424.1 Protein Homology CDS 1 490 . - 0 ID=cds-TGC78901.1;Parent=gene-C9F09_24515;Dbxref=NCBI_GP:TGC78901.1;Name=TGC78901.1;Note=catalyzes the hydrolysis of 1%2C4-beta-D-glucosidic linkages in cellulose%2C lichenin and cereal beta-D-glucans;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458303.1;locus_tag=C9F09_24515;partial=true;product=endo-1%2C4-D-glucanase;protein_id=TGC78901.1;start_range=.,1;transl_table=11 PYKB01001424.1 Genbank gene 494 2794 . - . ID=gene-C9F09_24520;Name=C9F09_24520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24520 PYKB01001424.1 Protein Homology CDS 494 2794 . - 0 ID=cds-TGC78902.1;Parent=gene-C9F09_24520;Dbxref=NCBI_GP:TGC78902.1;Name=TGC78902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=C9F09_24520;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=TGC78902.1;transl_table=11 PYKB01001424.1 Genbank gene 2805 3284 . - . ID=gene-C9F09_24525;Name=bcsA;end_range=3284,.;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=C9F09_24525;partial=true PYKB01001424.1 Protein Homology CDS 2805 3284 . - 0 ID=cds-TGC78903.1;Parent=gene-C9F09_24525;Dbxref=NCBI_GP:TGC78903.1;Name=TGC78903.1;Note=polymerizes uridine 5'-diphosphate glucose to cellulose%3B acts with BcsB%2C BcsZ and BcsC in cellulose biosynthesis;end_range=3284,.;gbkey=CDS;gene=bcsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458301.1;locus_tag=C9F09_24525;partial=true;product=UDP-forming cellulose synthase catalytic subunit;protein_id=TGC78903.1;transl_table=11 ##sequence-region PYKB01000688.1 1 3274 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000688.1 Genbank region 1 3274 . + . ID=PYKB01000688.1:1..3274;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000688.1 Genbank gene 1 457 . - . ID=gene-C9F09_10425;Name=C9F09_10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10425;partial=true;start_range=.,1 PYKB01000688.1 Protein Homology CDS 1 457 . - 0 ID=cds-TGC93872.1;Parent=gene-C9F09_10425;Dbxref=NCBI_GP:TGC93872.1;Name=TGC93872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000455661.1;locus_tag=C9F09_10425;partial=true;product=pilin outer membrane usher protein SafC;protein_id=TGC93872.1;start_range=.,1;transl_table=11 PYKB01000688.1 Genbank gene 581 1411 . - . ID=gene-C9F09_10430;Name=C9F09_10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10430 PYKB01000688.1 Protein Homology CDS 581 1411 . - 0 ID=cds-TGC93873.1;Parent=gene-C9F09_10430;Dbxref=NCBI_GP:TGC93873.1;Name=TGC93873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001180236.1;locus_tag=C9F09_10430;product=molecular chaperone;protein_id=TGC93873.1;transl_table=11 PYKB01000688.1 Genbank gene 1613 1918 . - . ID=gene-C9F09_10435;Name=C9F09_10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10435 PYKB01000688.1 Protein Homology CDS 1613 1918 . - 0 ID=cds-TGC93874.1;Parent=gene-C9F09_10435;Dbxref=NCBI_GP:TGC93874.1;Name=TGC93874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000370555.1;locus_tag=C9F09_10435;product=PabB family transcriptional regulator;protein_id=TGC93874.1;transl_table=11 PYKB01000688.1 Genbank pseudogene 2451 2594 . + . ID=gene-C9F09_10440;Name=C9F09_10440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10440;pseudo=true PYKB01000688.1 Protein Homology CDS 2451 2594 . + 0 ID=cds-C9F09_10440;Parent=gene-C9F09_10440;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611389.1;locus_tag=C9F09_10440;product=IS3 family transposase;pseudo=true;transl_table=11 PYKB01000688.1 Genbank pseudogene 2611 2957 . + . ID=gene-C9F09_10445;Name=C9F09_10445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10445;pseudo=true PYKB01000688.1 Protein Homology CDS 2611 2957 . + 0 ID=cds-C9F09_10445;Parent=gene-C9F09_10445;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=C9F09_10445;product=ISNCY family transposase;pseudo=true;transl_table=11 PYKB01000688.1 Genbank gene 3031 3274 . - . ID=gene-C9F09_10450;Name=C9F09_10450;end_range=3274,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10450;partial=true PYKB01000688.1 GeneMarkS+ CDS 3031 3274 . - 1 ID=cds-TGC93875.1;Parent=gene-C9F09_10450;Dbxref=NCBI_GP:TGC93875.1;Name=TGC93875.1;end_range=3274,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_10450;partial=true;product=hypothetical protein;protein_id=TGC93875.1;transl_table=11 ##sequence-region PYKB01001212.1 1 3238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001212.1 Genbank region 1 3238 . + . ID=PYKB01001212.1:1..3238;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001212.1 Genbank gene 1 788 . + . ID=gene-C9F09_20625;Name=C9F09_20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20625;partial=true;start_range=.,1 PYKB01001212.1 Protein Homology CDS 1 788 . + 2 ID=cds-TGC83089.1;Parent=gene-C9F09_20625;Dbxref=NCBI_GP:TGC83089.1;Name=TGC83089.1;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454772.1;locus_tag=C9F09_20625;partial=true;product=aconitate hydratase B;protein_id=TGC83089.1;start_range=.,1;transl_table=11 PYKB01001212.1 Genbank gene 828 1292 . - . ID=gene-C9F09_20630;Name=C9F09_20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20630 PYKB01001212.1 Protein Homology CDS 828 1292 . - 0 ID=cds-TGC83090.1;Parent=gene-C9F09_20630;Dbxref=NCBI_GP:TGC83090.1;Name=TGC83090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=C9F09_20630;product=hypothetical protein;protein_id=TGC83090.1;transl_table=11 PYKB01001212.1 Genbank gene 1710 2033 . - . ID=gene-C9F09_20635;Name=C9F09_20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20635 PYKB01001212.1 Protein Homology CDS 1710 2033 . - 0 ID=cds-TGC83091.1;Parent=gene-C9F09_20635;Dbxref=NCBI_GP:TGC83091.1;Name=TGC83091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=C9F09_20635;product=phosphotyrosine protein phosphatase;protein_id=TGC83091.1;transl_table=11 PYKB01001212.1 Genbank gene 2304 2666 . + . ID=gene-C9F09_20640;Name=C9F09_20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20640 PYKB01001212.1 Protein Homology CDS 2304 2666 . + 0 ID=cds-TGC83092.1;Parent=gene-C9F09_20640;Dbxref=NCBI_GP:TGC83092.1;Name=TGC83092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=C9F09_20640;product=UPF0231 family protein;protein_id=TGC83092.1;transl_table=11 PYKB01001212.1 Genbank gene 2901 3238 . + . ID=gene-C9F09_20645;Name=C9F09_20645;end_range=3238,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20645;partial=true PYKB01001212.1 Protein Homology CDS 2901 3238 . + 0 ID=cds-TGC83093.1;Parent=gene-C9F09_20645;Dbxref=NCBI_GP:TGC83093.1;Name=TGC83093.1;end_range=3238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454774.1;locus_tag=C9F09_20645;partial=true;product=2-keto-3-deoxygluconate permease 1;protein_id=TGC83093.1;transl_table=11 ##sequence-region PYKB01001369.1 1 3232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001369.1 Genbank region 1 3232 . + . ID=PYKB01001369.1:1..3232;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001369.1 Genbank gene 192 959 . - . ID=gene-C9F09_23555;Name=C9F09_23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23555 PYKB01001369.1 Protein Homology CDS 192 959 . - 0 ID=cds-TGC80180.1;Parent=gene-C9F09_23555;Dbxref=NCBI_GP:TGC80180.1;Name=TGC80180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=C9F09_23555;product=amidohydrolase;protein_id=TGC80180.1;transl_table=11 PYKB01001369.1 Genbank gene 1068 3232 . - . ID=gene-C9F09_23560;Name=fadE;end_range=3232,.;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=C9F09_23560;partial=true PYKB01001369.1 Protein Homology CDS 1068 3232 . - 2 ID=cds-TGC80181.1;Parent=gene-C9F09_23560;Dbxref=NCBI_GP:TGC80181.1;Name=TGC80181.1;Note=functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA;end_range=3232,.;gbkey=CDS;gene=fadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=C9F09_23560;partial=true;product=acyl-CoA dehydrogenase;protein_id=TGC80181.1;transl_table=11 ##sequence-region PYKB01000401.1 1 3230 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000401.1 Genbank region 1 3230 . + . ID=PYKB01000401.1:1..3230;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000401.1 Genbank gene 1 200 . + . ID=gene-C9F09_04495;Name=C9F09_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04495;partial=true;start_range=.,1 PYKB01000401.1 Protein Homology CDS 1 200 . + 2 ID=cds-TGC99591.1;Parent=gene-C9F09_04495;Dbxref=NCBI_GP:TGC99591.1;Name=TGC99591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454758.1;locus_tag=C9F09_04495;partial=true;product=prepilin peptidase-dependent pilin;protein_id=TGC99591.1;start_range=.,1;transl_table=11 PYKB01000401.1 Genbank gene 210 1595 . + . ID=gene-C9F09_04500;Name=C9F09_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04500 PYKB01000401.1 Protein Homology CDS 210 1595 . + 0 ID=cds-TGC99592.1;Parent=gene-C9F09_04500;Dbxref=NCBI_GP:TGC99592.1;Name=TGC99592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=C9F09_04500;product=type II secretion system protein GspE;protein_id=TGC99592.1;transl_table=11 PYKB01000401.1 Genbank gene 1585 2787 . + . ID=gene-C9F09_04505;Name=C9F09_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04505 PYKB01000401.1 Protein Homology CDS 1585 2787 . + 0 ID=cds-TGC99593.1;Parent=gene-C9F09_04505;Dbxref=NCBI_GP:TGC99593.1;Name=TGC99593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=C9F09_04505;product=type IV pilin biogenesis protein;protein_id=TGC99593.1;transl_table=11 PYKB01000401.1 Genbank gene 2818 3230 . - . ID=gene-C9F09_04510;Name=C9F09_04510;end_range=3230,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04510;partial=true PYKB01000401.1 Protein Homology CDS 2818 3230 . - 2 ID=cds-TGC99594.1;Parent=gene-C9F09_04510;Dbxref=NCBI_GP:TGC99594.1;Name=TGC99594.1;Note=catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate;end_range=3230,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454755.1;locus_tag=C9F09_04510;partial=true;product=GMP reductase;protein_id=TGC99594.1;transl_table=11 ##sequence-region PYKB01000530.1 1 10877 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000530.1 Genbank region 1 10877 . + . ID=PYKB01000530.1:1..10877;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000530.1 Genbank gene 1 662 . - . ID=gene-C9F09_07150;Name=C9F09_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07150;partial=true;start_range=.,1 PYKB01000530.1 Protein Homology CDS 1 662 . - 0 ID=cds-TGC96969.1;Parent=gene-C9F09_07150;Dbxref=NCBI_GP:TGC96969.1;Name=TGC96969.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=C9F09_07150;partial=true;product=pyruvate kinase;protein_id=TGC96969.1;start_range=.,1;transl_table=11 PYKB01000530.1 Genbank gene 847 1161 . + . ID=gene-C9F09_07155;Name=C9F09_07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07155 PYKB01000530.1 Protein Homology CDS 847 1161 . + 0 ID=cds-TGC96970.1;Parent=gene-C9F09_07155;Dbxref=NCBI_GP:TGC96970.1;Name=TGC96970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000011320.1;locus_tag=C9F09_07155;product=hypothetical protein;protein_id=TGC96970.1;transl_table=11 PYKB01000530.1 Genbank gene 1064 2407 . - . ID=gene-C9F09_07160;Name=C9F09_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07160 PYKB01000530.1 Protein Homology CDS 1064 2407 . - 0 ID=cds-TGC96971.1;Parent=gene-C9F09_07160;Dbxref=NCBI_GP:TGC96971.1;Name=TGC96971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=C9F09_07160;product=amino acid permease;protein_id=TGC96971.1;transl_table=11 PYKB01000530.1 Genbank gene 2429 3322 . - . ID=gene-C9F09_07165;Name=C9F09_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07165 PYKB01000530.1 Protein Homology CDS 2429 3322 . - 0 ID=cds-TGC96972.1;Parent=gene-C9F09_07165;Dbxref=NCBI_GP:TGC96972.1;Name=TGC96972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=C9F09_07165;product=hydrolase;protein_id=TGC96972.1;transl_table=11 PYKB01000530.1 Genbank gene 3381 4118 . - . ID=gene-C9F09_07170;Name=C9F09_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07170 PYKB01000530.1 Protein Homology CDS 3381 4118 . - 0 ID=cds-TGC96973.1;Parent=gene-C9F09_07170;Dbxref=NCBI_GP:TGC96973.1;Name=TGC96973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=C9F09_07170;product=cytoplasmic protein;protein_id=TGC96973.1;transl_table=11 PYKB01000530.1 Genbank gene 4130 5356 . - . ID=gene-C9F09_07175;Name=C9F09_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07175 PYKB01000530.1 Protein Homology CDS 4130 5356 . - 0 ID=cds-TGC96974.1;Parent=gene-C9F09_07175;Dbxref=NCBI_GP:TGC96974.1;Name=TGC96974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=C9F09_07175;product=hypothetical protein;protein_id=TGC96974.1;transl_table=11 PYKB01000530.1 Genbank pseudogene 5679 8741 . - . ID=gene-C9F09_07180;Name=C9F09_07180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07180;pseudo=true PYKB01000530.1 Protein Homology CDS 5679 8741 . - 0 ID=cds-C9F09_07180;Parent=gene-C9F09_07180;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=C9F09_07180;product=tetrathionate reductase subunit TtrA;pseudo=true;transl_table=11 PYKB01000530.1 Genbank gene 8734 9756 . - . ID=gene-C9F09_07185;Name=C9F09_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07185 PYKB01000530.1 Protein Homology CDS 8734 9756 . - 0 ID=cds-TGC96975.1;Parent=gene-C9F09_07185;Dbxref=NCBI_GP:TGC96975.1;Name=TGC96975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=C9F09_07185;product=tetrathionate reductase subunit TtrC;protein_id=TGC96975.1;transl_table=11 PYKB01000530.1 Genbank gene 9757 10509 . - . ID=gene-C9F09_07190;Name=C9F09_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07190 PYKB01000530.1 Protein Homology CDS 9757 10509 . - 0 ID=cds-TGC96976.1;Parent=gene-C9F09_07190;Dbxref=NCBI_GP:TGC96976.1;Name=TGC96976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456142.1;locus_tag=C9F09_07190;product=tetrathionate reductase subunit TtrB;protein_id=TGC96976.1;transl_table=11 PYKB01000530.1 Genbank gene 10673 10877 . + . ID=gene-C9F09_07195;Name=C9F09_07195;end_range=10877,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07195;partial=true PYKB01000530.1 Protein Homology CDS 10673 10877 . + 0 ID=cds-TGC96977.1;Parent=gene-C9F09_07195;Dbxref=NCBI_GP:TGC96977.1;Name=TGC96977.1;end_range=10877,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=C9F09_07195;partial=true;product=sensor histidine kinase;protein_id=TGC96977.1;transl_table=11 ##sequence-region PYKB01001577.1 1 18590 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001577.1 Genbank region 1 18590 . + . ID=PYKB01001577.1:1..18590;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001577.1 Genbank pseudogene 84 665 . + . ID=gene-C9F09_27530;Name=C9F09_27530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_27530;pseudo=true PYKB01001577.1 Protein Homology CDS 84 665 . + 0 ID=cds-C9F09_27530;Parent=gene-C9F09_27530;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457927.1;locus_tag=C9F09_27530;product=biotin--[acetyl-CoA-carboxylase] ligase;pseudo=true;transl_table=11 PYKB01001577.1 Genbank gene 701 1651 . - . ID=gene-C9F09_27535;Name=C9F09_27535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27535 PYKB01001577.1 Protein Homology CDS 701 1651 . - 0 ID=cds-TGC75326.1;Parent=gene-C9F09_27535;Dbxref=NCBI_GP:TGC75326.1;Name=TGC75326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457926.1;locus_tag=C9F09_27535;product=type I pantothenate kinase;protein_id=TGC75326.1;transl_table=11 PYKB01001577.1 Genbank pseudogene 1634 1840 . + . ID=gene-C9F09_27540;Name=C9F09_27540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_27540;pseudo=true PYKB01001577.1 Protein Homology CDS 1634 1840 . + 0 ID=cds-C9F09_27540;Parent=gene-C9F09_27540;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001353728.1;locus_tag=C9F09_27540;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001577.1 Genbank gene 1860 2033 . - . ID=gene-C9F09_27545;Name=C9F09_27545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27545 PYKB01001577.1 Protein Homology CDS 1860 2033 . - 0 ID=cds-TGC75327.1;Parent=gene-C9F09_27545;Dbxref=NCBI_GP:TGC75327.1;Name=TGC75327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=C9F09_27545;product=hypothetical protein;protein_id=TGC75327.1;transl_table=11 PYKB01001577.1 Genbank gene 2053 2128 . + . ID=gene-C9F09_27550;Name=C9F09_27550;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_27550 PYKB01001577.1 tRNAscan-SE tRNA 2053 2128 . + . ID=rna-C9F09_27550;Parent=gene-C9F09_27550;anticodon=(pos:2086..2088);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_27550;product=tRNA-Thr PYKB01001577.1 tRNAscan-SE exon 2053 2128 . + . ID=exon-C9F09_27550-1;Parent=rna-C9F09_27550;anticodon=(pos:2086..2088);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_27550;product=tRNA-Thr PYKB01001577.1 Genbank gene 2137 2221 . + . ID=gene-C9F09_27555;Name=C9F09_27555;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_27555 PYKB01001577.1 tRNAscan-SE tRNA 2137 2221 . + . ID=rna-C9F09_27555;Parent=gene-C9F09_27555;anticodon=(pos:2171..2173);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_27555;product=tRNA-Tyr PYKB01001577.1 tRNAscan-SE exon 2137 2221 . + . ID=exon-C9F09_27555-1;Parent=rna-C9F09_27555;anticodon=(pos:2171..2173);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_27555;product=tRNA-Tyr PYKB01001577.1 Genbank gene 2338 2412 . + . ID=gene-C9F09_27560;Name=C9F09_27560;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_27560 PYKB01001577.1 tRNAscan-SE tRNA 2338 2412 . + . ID=rna-C9F09_27560;Parent=gene-C9F09_27560;anticodon=(pos:2371..2373);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_27560;product=tRNA-Gly PYKB01001577.1 tRNAscan-SE exon 2338 2412 . + . ID=exon-C9F09_27560-1;Parent=rna-C9F09_27560;anticodon=(pos:2371..2373);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_27560;product=tRNA-Gly PYKB01001577.1 Genbank gene 2419 2494 . + . ID=gene-C9F09_27565;Name=C9F09_27565;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_27565 PYKB01001577.1 tRNAscan-SE tRNA 2419 2494 . + . ID=rna-C9F09_27565;Parent=gene-C9F09_27565;anticodon=(pos:2452..2454);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_27565;product=tRNA-Thr PYKB01001577.1 tRNAscan-SE exon 2419 2494 . + . ID=exon-C9F09_27565-1;Parent=rna-C9F09_27565;anticodon=(pos:2452..2454);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_27565;product=tRNA-Thr PYKB01001577.1 Genbank gene 2610 3794 . + . ID=gene-C9F09_27570;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=C9F09_27570 PYKB01001577.1 Protein Homology CDS 2610 3794 . + 0 ID=cds-TGC75328.1;Parent=gene-C9F09_27570;Dbxref=NCBI_GP:TGC75328.1;Name=TGC75328.1;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457924.1;locus_tag=C9F09_27570;product=elongation factor Tu;protein_id=TGC75328.1;transl_table=11 PYKB01001577.1 Genbank gene 3775 3966 . + . ID=gene-C9F09_27575;Name=C9F09_27575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27575 PYKB01001577.1 Protein Homology CDS 3775 3966 . + 0 ID=cds-TGC75329.1;Parent=gene-C9F09_27575;Dbxref=NCBI_GP:TGC75329.1;Name=TGC75329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675269.1;locus_tag=C9F09_27575;product=elongation factor Tu;protein_id=TGC75329.1;transl_table=11 PYKB01001577.1 Genbank gene 3886 4044 . - . ID=gene-C9F09_27580;Name=C9F09_27580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27580 PYKB01001577.1 Protein Homology CDS 3886 4044 . - 0 ID=cds-TGC75361.1;Parent=gene-C9F09_27580;Dbxref=NCBI_GP:TGC75361.1;Name=TGC75361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078165.1;locus_tag=C9F09_27580;product=ferredoxin;protein_id=TGC75361.1;transl_table=11 PYKB01001577.1 Genbank gene 3979 4173 . + . ID=gene-C9F09_27585;Name=C9F09_27585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27585 PYKB01001577.1 Protein Homology CDS 3979 4173 . + 0 ID=cds-TGC75330.1;Parent=gene-C9F09_27585;Dbxref=NCBI_GP:TGC75330.1;Name=TGC75330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458456.1;locus_tag=C9F09_27585;product=bacterioferritin-associated ferredoxin;protein_id=TGC75330.1;transl_table=11 PYKB01001577.1 Genbank gene 4246 4722 . + . ID=gene-C9F09_27590;Name=C9F09_27590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27590 PYKB01001577.1 Protein Homology CDS 4246 4722 . + 0 ID=cds-TGC75331.1;Parent=gene-C9F09_27590;Dbxref=NCBI_GP:TGC75331.1;Name=TGC75331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=C9F09_27590;product=bacterioferritin;protein_id=TGC75331.1;transl_table=11 PYKB01001577.1 Genbank gene 4719 5186 . - . ID=gene-C9F09_27595;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=C9F09_27595 PYKB01001577.1 Protein Homology CDS 4719 5186 . - 0 ID=cds-TGC75332.1;Parent=gene-C9F09_27595;Dbxref=NCBI_GP:TGC75332.1;Name=TGC75332.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458458.1;locus_tag=C9F09_27595;product=leader peptidase HopD;protein_id=TGC75332.1;transl_table=11 PYKB01001577.1 Genbank gene 5209 5388 . + . ID=gene-C9F09_27600;Name=C9F09_27600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27600 PYKB01001577.1 Protein Homology CDS 5209 5388 . + 0 ID=cds-TGC75333.1;Parent=gene-C9F09_27600;Dbxref=NCBI_GP:TGC75333.1;Name=TGC75333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664645.1;locus_tag=C9F09_27600;product=hypothetical protein;protein_id=TGC75333.1;transl_table=11 PYKB01001577.1 Genbank gene 5566 5877 . + . ID=gene-C9F09_27605;Name=C9F09_27605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27605 PYKB01001577.1 Protein Homology CDS 5566 5877 . + 0 ID=cds-TGC75334.1;Parent=gene-C9F09_27605;Dbxref=NCBI_GP:TGC75334.1;Name=TGC75334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458459.1;locus_tag=C9F09_27605;product=30S ribosomal protein S10;protein_id=TGC75334.1;transl_table=11 PYKB01001577.1 Genbank gene 5910 6539 . + . ID=gene-C9F09_27610;Name=C9F09_27610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27610 PYKB01001577.1 Protein Homology CDS 5910 6539 . + 0 ID=cds-TGC75335.1;Parent=gene-C9F09_27610;Dbxref=NCBI_GP:TGC75335.1;Name=TGC75335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=C9F09_27610;product=50S ribosomal protein L3;protein_id=TGC75335.1;transl_table=11 PYKB01001577.1 Genbank gene 6550 7155 . + . ID=gene-C9F09_27615;Name=C9F09_27615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27615 PYKB01001577.1 Protein Homology CDS 6550 7155 . + 0 ID=cds-TGC75336.1;Parent=gene-C9F09_27615;Dbxref=NCBI_GP:TGC75336.1;Name=TGC75336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=C9F09_27615;product=50S ribosomal protein L4;protein_id=TGC75336.1;transl_table=11 PYKB01001577.1 Genbank gene 7152 7454 . + . ID=gene-C9F09_27620;Name=C9F09_27620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27620 PYKB01001577.1 Protein Homology CDS 7152 7454 . + 0 ID=cds-TGC75337.1;Parent=gene-C9F09_27620;Dbxref=NCBI_GP:TGC75337.1;Name=TGC75337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=C9F09_27620;product=50S ribosomal protein L23;protein_id=TGC75337.1;transl_table=11 PYKB01001577.1 Genbank gene 7472 8293 . + . ID=gene-C9F09_27625;Name=C9F09_27625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27625 PYKB01001577.1 Protein Homology CDS 7472 8293 . + 0 ID=cds-TGC75338.1;Parent=gene-C9F09_27625;Dbxref=NCBI_GP:TGC75338.1;Name=TGC75338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=C9F09_27625;product=50S ribosomal protein L2;protein_id=TGC75338.1;transl_table=11 PYKB01001577.1 Genbank gene 8310 8588 . + . ID=gene-C9F09_27630;Name=C9F09_27630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27630 PYKB01001577.1 Protein Homology CDS 8310 8588 . + 0 ID=cds-TGC75339.1;Parent=gene-C9F09_27630;Dbxref=NCBI_GP:TGC75339.1;Name=TGC75339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=C9F09_27630;product=30S ribosomal protein S19;protein_id=TGC75339.1;transl_table=11 PYKB01001577.1 Genbank gene 8603 8935 . + . ID=gene-C9F09_27635;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=C9F09_27635 PYKB01001577.1 Protein Homology CDS 8603 8935 . + 0 ID=cds-TGC75340.1;Parent=gene-C9F09_27635;Dbxref=NCBI_GP:TGC75340.1;Name=TGC75340.1;gbkey=CDS;gene=rplV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=C9F09_27635;product=50S ribosomal protein L22;protein_id=TGC75340.1;transl_table=11 PYKB01001577.1 Genbank gene 8953 9654 . + . ID=gene-C9F09_27640;Name=C9F09_27640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27640 PYKB01001577.1 Protein Homology CDS 8953 9654 . + 0 ID=cds-TGC75341.1;Parent=gene-C9F09_27640;Dbxref=NCBI_GP:TGC75341.1;Name=TGC75341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529946.1;locus_tag=C9F09_27640;product=30S ribosomal protein S3;protein_id=TGC75341.1;transl_table=11 PYKB01001577.1 Genbank gene 9667 10077 . + . ID=gene-C9F09_27645;Name=C9F09_27645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27645 PYKB01001577.1 Protein Homology CDS 9667 10077 . + 0 ID=cds-TGC75342.1;Parent=gene-C9F09_27645;Dbxref=NCBI_GP:TGC75342.1;Name=TGC75342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=C9F09_27645;product=50S ribosomal protein L16;protein_id=TGC75342.1;transl_table=11 PYKB01001577.1 Genbank gene 10077 10268 . + . ID=gene-C9F09_27650;Name=C9F09_27650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27650 PYKB01001577.1 Protein Homology CDS 10077 10268 . + 0 ID=cds-TGC75343.1;Parent=gene-C9F09_27650;Dbxref=NCBI_GP:TGC75343.1;Name=TGC75343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=C9F09_27650;product=50S ribosomal protein L29;protein_id=TGC75343.1;transl_table=11 PYKB01001577.1 Genbank gene 10268 10522 . + . ID=gene-C9F09_27655;Name=C9F09_27655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27655 PYKB01001577.1 Protein Homology CDS 10268 10522 . + 0 ID=cds-TGC75344.1;Parent=gene-C9F09_27655;Dbxref=NCBI_GP:TGC75344.1;Name=TGC75344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=C9F09_27655;product=30S ribosomal protein S17;protein_id=TGC75344.1;transl_table=11 PYKB01001577.1 Genbank gene 10686 11057 . + . ID=gene-C9F09_27660;Name=C9F09_27660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27660 PYKB01001577.1 Protein Homology CDS 10686 11057 . + 0 ID=cds-TGC75345.1;Parent=gene-C9F09_27660;Dbxref=NCBI_GP:TGC75345.1;Name=TGC75345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458470.1;locus_tag=C9F09_27660;product=50S ribosomal protein L14;protein_id=TGC75345.1;transl_table=11 PYKB01001577.1 Genbank gene 11068 11382 . + . ID=gene-C9F09_27665;Name=C9F09_27665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27665 PYKB01001577.1 Protein Homology CDS 11068 11382 . + 0 ID=cds-TGC75346.1;Parent=gene-C9F09_27665;Dbxref=NCBI_GP:TGC75346.1;Name=TGC75346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=C9F09_27665;product=50S ribosomal protein L24;protein_id=TGC75346.1;transl_table=11 PYKB01001577.1 Genbank gene 11397 11936 . + . ID=gene-C9F09_27670;Name=C9F09_27670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27670 PYKB01001577.1 Protein Homology CDS 11397 11936 . + 0 ID=cds-TGC75347.1;Parent=gene-C9F09_27670;Dbxref=NCBI_GP:TGC75347.1;Name=TGC75347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=C9F09_27670;product=50S ribosomal protein L5;protein_id=TGC75347.1;transl_table=11 PYKB01001577.1 Genbank gene 11951 12256 . + . ID=gene-C9F09_27675;Name=C9F09_27675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27675 PYKB01001577.1 Protein Homology CDS 11951 12256 . + 0 ID=cds-TGC75348.1;Parent=gene-C9F09_27675;Dbxref=NCBI_GP:TGC75348.1;Name=TGC75348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438702.1;locus_tag=C9F09_27675;product=30S ribosomal protein S14;protein_id=TGC75348.1;transl_table=11 PYKB01001577.1 Genbank gene 12290 12682 . + . ID=gene-C9F09_27680;Name=C9F09_27680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27680 PYKB01001577.1 Protein Homology CDS 12290 12682 . + 0 ID=cds-TGC75349.1;Parent=gene-C9F09_27680;Dbxref=NCBI_GP:TGC75349.1;Name=TGC75349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=C9F09_27680;product=30S ribosomal protein S8;protein_id=TGC75349.1;transl_table=11 PYKB01001577.1 Genbank gene 12695 13228 . + . ID=gene-C9F09_27685;Name=C9F09_27685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27685 PYKB01001577.1 Protein Homology CDS 12695 13228 . + 0 ID=cds-TGC75350.1;Parent=gene-C9F09_27685;Dbxref=NCBI_GP:TGC75350.1;Name=TGC75350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=C9F09_27685;product=50S ribosomal protein L6;protein_id=TGC75350.1;transl_table=11 PYKB01001577.1 Genbank gene 13238 13591 . + . ID=gene-C9F09_27690;Name=C9F09_27690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27690 PYKB01001577.1 Protein Homology CDS 13238 13591 . + 0 ID=cds-TGC75351.1;Parent=gene-C9F09_27690;Dbxref=NCBI_GP:TGC75351.1;Name=TGC75351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=C9F09_27690;product=50S ribosomal protein L18;protein_id=TGC75351.1;transl_table=11 PYKB01001577.1 Genbank gene 13606 14109 . + . ID=gene-C9F09_27695;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=C9F09_27695 PYKB01001577.1 Protein Homology CDS 13606 14109 . + 0 ID=cds-TGC75352.1;Parent=gene-C9F09_27695;Dbxref=NCBI_GP:TGC75352.1;Name=TGC75352.1;gbkey=CDS;gene=rpsE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=C9F09_27695;product=30S ribosomal protein S5;protein_id=TGC75352.1;transl_table=11 PYKB01001577.1 Genbank gene 14113 14292 . + . ID=gene-C9F09_27700;Name=C9F09_27700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27700 PYKB01001577.1 Protein Homology CDS 14113 14292 . + 0 ID=cds-TGC75353.1;Parent=gene-C9F09_27700;Dbxref=NCBI_GP:TGC75353.1;Name=TGC75353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=C9F09_27700;product=50S ribosomal protein L30;protein_id=TGC75353.1;transl_table=11 PYKB01001577.1 Genbank gene 14296 14730 . + . ID=gene-C9F09_27705;Name=C9F09_27705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27705 PYKB01001577.1 Protein Homology CDS 14296 14730 . + 0 ID=cds-TGC75354.1;Parent=gene-C9F09_27705;Dbxref=NCBI_GP:TGC75354.1;Name=TGC75354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=C9F09_27705;product=50S ribosomal protein L15;protein_id=TGC75354.1;transl_table=11 PYKB01001577.1 Genbank gene 14738 16069 . + . ID=gene-C9F09_27710;Name=C9F09_27710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27710 PYKB01001577.1 Protein Homology CDS 14738 16069 . + 0 ID=cds-TGC75355.1;Parent=gene-C9F09_27710;Dbxref=NCBI_GP:TGC75355.1;Name=TGC75355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=C9F09_27710;product=preprotein translocase subunit SecY;protein_id=TGC75355.1;transl_table=11 PYKB01001577.1 Genbank gene 16101 16217 . + . ID=gene-C9F09_27715;Name=C9F09_27715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27715 PYKB01001577.1 Protein Homology CDS 16101 16217 . + 0 ID=cds-TGC75356.1;Parent=gene-C9F09_27715;Dbxref=NCBI_GP:TGC75356.1;Name=TGC75356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=C9F09_27715;product=50S ribosomal protein L36;protein_id=TGC75356.1;transl_table=11 PYKB01001577.1 Genbank gene 16364 16720 . + . ID=gene-C9F09_27720;Name=C9F09_27720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27720 PYKB01001577.1 Protein Homology CDS 16364 16720 . + 0 ID=cds-TGC75357.1;Parent=gene-C9F09_27720;Dbxref=NCBI_GP:TGC75357.1;Name=TGC75357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017051447.1;locus_tag=C9F09_27720;product=30S ribosomal protein S13;protein_id=TGC75357.1;transl_table=11 PYKB01001577.1 Genbank gene 16737 17126 . + . ID=gene-C9F09_27725;Name=C9F09_27725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27725 PYKB01001577.1 Protein Homology CDS 16737 17126 . + 0 ID=cds-TGC75358.1;Parent=gene-C9F09_27725;Dbxref=NCBI_GP:TGC75358.1;Name=TGC75358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=C9F09_27725;product=30S ribosomal protein S11;protein_id=TGC75358.1;transl_table=11 PYKB01001577.1 Genbank gene 17160 17780 . + . ID=gene-C9F09_27730;Name=C9F09_27730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27730 PYKB01001577.1 Protein Homology CDS 17160 17780 . + 0 ID=cds-TGC75359.1;Parent=gene-C9F09_27730;Dbxref=NCBI_GP:TGC75359.1;Name=TGC75359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462320.1;locus_tag=C9F09_27730;product=30S ribosomal protein S4;protein_id=TGC75359.1;transl_table=11 PYKB01001577.1 Genbank gene 17806 18590 . + . ID=gene-C9F09_27735;Name=C9F09_27735;end_range=18590,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27735;partial=true PYKB01001577.1 Protein Homology CDS 17806 18590 . + 0 ID=cds-TGC75360.1;Parent=gene-C9F09_27735;Dbxref=NCBI_GP:TGC75360.1;Name=TGC75360.1;end_range=18590,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312187.1;locus_tag=C9F09_27735;partial=true;product=DNA-directed RNA polymerase subunit alpha;protein_id=TGC75360.1;transl_table=11 ##sequence-region PYKB01000862.1 1 3228 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000862.1 Genbank region 1 3228 . + . ID=PYKB01000862.1:1..3228;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000862.1 Genbank gene 1 649 . - . ID=gene-C9F09_13960;Name=C9F09_13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13960;partial=true;start_range=.,1 PYKB01000862.1 Protein Homology CDS 1 649 . - 0 ID=cds-TGC90925.1;Parent=gene-C9F09_13960;Dbxref=NCBI_GP:TGC90925.1;Name=TGC90925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456676.1;locus_tag=C9F09_13960;partial=true;product=two-component system sensor histidine kinase BaeA;protein_id=TGC90925.1;start_range=.,1;transl_table=11 PYKB01000862.1 Genbank gene 649 2061 . - . ID=gene-C9F09_13965;Name=C9F09_13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13965 PYKB01000862.1 Protein Homology CDS 649 2061 . - 0 ID=cds-TGC90926.1;Parent=gene-C9F09_13965;Dbxref=NCBI_GP:TGC90926.1;Name=TGC90926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=C9F09_13965;product=MFS transporter;protein_id=TGC90926.1;transl_table=11 PYKB01000862.1 Genbank gene 2058 3228 . - . ID=gene-C9F09_13970;Name=C9F09_13970;end_range=3228,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13970;partial=true PYKB01000862.1 Protein Homology CDS 2058 3228 . - 1 ID=cds-TGC90927.1;Parent=gene-C9F09_13970;Dbxref=NCBI_GP:TGC90927.1;Name=TGC90927.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;end_range=3228,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=C9F09_13970;partial=true;product=multidrug transporter subunit MdtC;protein_id=TGC90927.1;transl_table=11 ##sequence-region PYKB01000400.1 1 3217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000400.1 Genbank region 1 3217 . + . ID=PYKB01000400.1:1..3217;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000400.1 Genbank gene 1 218 . - . ID=gene-C9F09_04475;Name=C9F09_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04475;partial=true;start_range=.,1 PYKB01000400.1 Protein Homology CDS 1 218 . - 0 ID=cds-TGC99647.1;Parent=gene-C9F09_04475;Dbxref=NCBI_GP:TGC99647.1;Name=TGC99647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462995.1;locus_tag=C9F09_04475;partial=true;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=TGC99647.1;start_range=.,1;transl_table=11 PYKB01000400.1 Genbank gene 184 2481 . - . ID=gene-C9F09_04480;Name=C9F09_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04480 PYKB01000400.1 Protein Homology CDS 184 2481 . - 0 ID=cds-TGC99645.1;Parent=gene-C9F09_04480;Dbxref=NCBI_GP:TGC99645.1;Name=TGC99645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462994.1;locus_tag=C9F09_04480;product=formate C-acetyltransferase;protein_id=TGC99645.1;transl_table=11 PYKB01000400.1 Genbank gene 2580 2900 . - . ID=gene-C9F09_04485;Name=C9F09_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04485 PYKB01000400.1 Protein Homology CDS 2580 2900 . - 0 ID=cds-TGC99646.1;Parent=gene-C9F09_04485;Dbxref=NCBI_GP:TGC99646.1;Name=TGC99646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462993.1;locus_tag=C9F09_04485;product=PTS system fructose-like transporter subunit IIB;protein_id=TGC99646.1;transl_table=11 PYKB01000400.1 Genbank gene 2915 3217 . - . ID=gene-C9F09_04490;Name=C9F09_04490;end_range=3217,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04490;partial=true PYKB01000400.1 Protein Homology CDS 2915 3217 . - 0 ID=cds-TGC99648.1;Parent=gene-C9F09_04490;Dbxref=NCBI_GP:TGC99648.1;Name=TGC99648.1;end_range=3217,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462992.1;locus_tag=C9F09_04490;partial=true;product=hypothetical protein;protein_id=TGC99648.1;transl_table=11 ##sequence-region PYKB01001400.1 1 3215 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001400.1 Genbank region 1 3215 . + . ID=PYKB01001400.1:1..3215;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001400.1 Genbank gene 63 926 . - . ID=gene-C9F09_24075;Name=C9F09_24075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24075 PYKB01001400.1 Protein Homology CDS 63 926 . - 0 ID=cds-TGC79422.1;Parent=gene-C9F09_24075;Dbxref=NCBI_GP:TGC79422.1;Name=TGC79422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457762.1;locus_tag=C9F09_24075;product=adenine-specific DNA-methyltransferase;protein_id=TGC79422.1;transl_table=11 PYKB01001400.1 Genbank gene 1012 1308 . - . ID=gene-C9F09_24080;Name=C9F09_24080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24080 PYKB01001400.1 Protein Homology CDS 1012 1308 . - 0 ID=cds-TGC79423.1;Parent=gene-C9F09_24080;Dbxref=NCBI_GP:TGC79423.1;Name=TGC79423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=C9F09_24080;product=Fis family transcriptional regulator;protein_id=TGC79423.1;transl_table=11 PYKB01001400.1 Genbank gene 1334 2299 . - . ID=gene-C9F09_24085;Name=C9F09_24085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24085 PYKB01001400.1 Protein Homology CDS 1334 2299 . - 0 ID=cds-TGC79424.1;Parent=gene-C9F09_24085;Dbxref=NCBI_GP:TGC79424.1;Name=TGC79424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=C9F09_24085;product=tRNA dihydrouridine synthase DusB;protein_id=TGC79424.1;transl_table=11 PYKB01001400.1 Genbank pseudogene 2960 3106 . - . ID=gene-C9F09_24090;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=pseudogene;locus_tag=C9F09_24090;pseudo=true PYKB01001400.1 Protein Homology CDS 2960 3106 . - 0 ID=cds-C9F09_24090;Parent=gene-C9F09_24090;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=prmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457759.1;locus_tag=C9F09_24090;product=50S ribosomal protein L11 methyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKB01000907.1 1 3210 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000907.1 Genbank region 1 3210 . + . ID=PYKB01000907.1:1..3210;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000907.1 Genbank gene 1 818 . + . ID=gene-C9F09_14910;Name=C9F09_14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14910;partial=true;start_range=.,1 PYKB01000907.1 Protein Homology CDS 1 818 . + 2 ID=cds-TGC90041.1;Parent=gene-C9F09_14910;Dbxref=NCBI_GP:TGC90041.1;Name=TGC90041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=C9F09_14910;partial=true;product=enterochelin esterase;protein_id=TGC90041.1;start_range=.,1;transl_table=11 PYKB01000907.1 Genbank gene 849 1067 . + . ID=gene-C9F09_14915;Name=C9F09_14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14915 PYKB01000907.1 Protein Homology CDS 849 1067 . + 0 ID=cds-TGC90042.1;Parent=gene-C9F09_14915;Dbxref=NCBI_GP:TGC90042.1;Name=TGC90042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=C9F09_14915;product=MbtH family protein;protein_id=TGC90042.1;transl_table=11 PYKB01000907.1 Genbank gene 1064 3210 . + . ID=gene-C9F09_14920;Name=entF;end_range=3210,.;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=C9F09_14920;partial=true PYKB01000907.1 Protein Homology CDS 1064 3210 . + 0 ID=cds-TGC90043.1;Parent=gene-C9F09_14920;Dbxref=NCBI_GP:TGC90043.1;Name=TGC90043.1;Note=with EntB%2C EntD%2C and EntE forms the multienzyme complex enterobactin synthase%3B EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin;end_range=3210,.;gbkey=CDS;gene=entF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=C9F09_14920;partial=true;product=non-ribosomal peptide synthetase;protein_id=TGC90043.1;transl_table=11 ##sequence-region PYKB01001741.1 1 3208 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001741.1 Genbank region 1 3208 . + . ID=PYKB01001741.1:1..3208;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001741.1 Genbank pseudogene 55 2175 . + . ID=gene-C9F09_30520;Name=C9F09_30520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_30520;pseudo=true PYKB01001741.1 Protein Homology CDS 55 2175 . + 0 ID=cds-C9F09_30520;Parent=gene-C9F09_30520;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=C9F09_30520;product=TonB-dependent siderophore receptor;pseudo=true;transl_table=11 PYKB01001741.1 Genbank gene 2231 2896 . - . ID=gene-C9F09_30525;Name=C9F09_30525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30525 PYKB01001741.1 Protein Homology CDS 2231 2896 . - 0 ID=cds-TGC70738.1;Parent=gene-C9F09_30525;Dbxref=NCBI_GP:TGC70738.1;Name=TGC70738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455908.1;locus_tag=C9F09_30525;product=GntR family transcriptional regulator;protein_id=TGC70738.1;transl_table=11 ##sequence-region PYKB01000671.1 1 3206 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000671.1 Genbank region 1 3206 . + . ID=PYKB01000671.1:1..3206;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000671.1 Genbank gene 1 990 . + . ID=gene-C9F09_10070;Name=C9F09_10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10070;partial=true;start_range=.,1 PYKB01000671.1 Protein Homology CDS 1 990 . + 0 ID=cds-TGC94058.1;Parent=gene-C9F09_10070;Dbxref=NCBI_GP:TGC94058.1;Name=TGC94058.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458241.1;locus_tag=C9F09_10070;partial=true;product=PTS mannitol transporter subunit IICBA;protein_id=TGC94058.1;start_range=.,1;transl_table=11 PYKB01000671.1 Genbank gene 1211 2359 . + . ID=gene-C9F09_10075;Name=C9F09_10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10075 PYKB01000671.1 Protein Homology CDS 1211 2359 . + 0 ID=cds-TGC94059.1;Parent=gene-C9F09_10075;Dbxref=NCBI_GP:TGC94059.1;Name=TGC94059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=C9F09_10075;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=TGC94059.1;transl_table=11 PYKB01000671.1 Genbank gene 2356 2946 . + . ID=gene-C9F09_10080;Name=C9F09_10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10080 PYKB01000671.1 Protein Homology CDS 2356 2946 . + 0 ID=cds-TGC94060.1;Parent=gene-C9F09_10080;Dbxref=NCBI_GP:TGC94060.1;Name=TGC94060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458239.1;locus_tag=C9F09_10080;product=MltR family transcriptional regulator;protein_id=TGC94060.1;transl_table=11 PYKB01000671.1 Genbank gene 2956 3165 . - . ID=gene-C9F09_10085;Name=C9F09_10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10085 PYKB01000671.1 Protein Homology CDS 2956 3165 . - 0 ID=cds-TGC94061.1;Parent=gene-C9F09_10085;Dbxref=NCBI_GP:TGC94061.1;Name=TGC94061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=C9F09_10085;product=hypothetical protein;protein_id=TGC94061.1;transl_table=11 ##sequence-region PYKB01000990.1 1 3204 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000990.1 Genbank region 1 3204 . + . ID=PYKB01000990.1:1..3204;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000990.1 Genbank gene 1 461 . + . ID=gene-C9F09_16510;Name=C9F09_16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16510;partial=true;start_range=.,1 PYKB01000990.1 Protein Homology CDS 1 461 . + 2 ID=cds-TGC88372.1;Parent=gene-C9F09_16510;Dbxref=NCBI_GP:TGC88372.1;Name=TGC88372.1;Note=in Salmonella is responsible for long O-antigen polymerization%3B may be part of the ferric enterobactin transport system%3B necessary for enetrobactin uptake;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=C9F09_16510;partial=true;product=LPS O-antigen length regulator;protein_id=TGC88372.1;start_range=.,1;transl_table=11 PYKB01000990.1 Genbank gene 514 1308 . - . ID=gene-C9F09_16515;Name=C9F09_16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16515 PYKB01000990.1 Protein Homology CDS 514 1308 . - 0 ID=cds-TGC88373.1;Parent=gene-C9F09_16515;Dbxref=NCBI_GP:TGC88373.1;Name=TGC88373.1;Note=with FepBDE is involved in the transport of ferric enterobactin;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455166.1;locus_tag=C9F09_16515;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=TGC88373.1;transl_table=11 PYKB01000990.1 Genbank gene 1305 2294 . - . ID=gene-C9F09_16520;Name=C9F09_16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16520 PYKB01000990.1 Protein Homology CDS 1305 2294 . - 0 ID=cds-TGC88374.1;Parent=gene-C9F09_16520;Dbxref=NCBI_GP:TGC88374.1;Name=TGC88374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455167.1;locus_tag=C9F09_16520;product=iron-enterobactin ABC transporter permease;protein_id=TGC88374.1;transl_table=11 PYKB01000990.1 Genbank pseudogene 2294 3133 . - . ID=gene-C9F09_16525;Name=C9F09_16525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16525;pseudo=true PYKB01000990.1 Protein Homology CDS 2294 3133 . - 0 ID=cds-C9F09_16525;Parent=gene-C9F09_16525;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455168.1;locus_tag=C9F09_16525;product=ferric enterobactin transporter permease FepD;pseudo=true;transl_table=11 ##sequence-region PYKB01000077.1 1 3198 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000077.1 Genbank region 1 3198 . + . ID=PYKB01000077.1:1..3198;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000077.1 Genbank gene 1 388 . - . ID=gene-C9F09_00910;Name=C9F09_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00910;partial=true;start_range=.,1 PYKB01000077.1 Protein Homology CDS 1 388 . - 0 ID=cds-TGD05912.1;Parent=gene-C9F09_00910;Dbxref=NCBI_GP:TGD05912.1;Name=TGD05912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=C9F09_00910;partial=true;product=hypothetical protein;protein_id=TGD05912.1;start_range=.,1;transl_table=11 PYKB01000077.1 Genbank gene 445 2139 . - . ID=gene-C9F09_00915;Name=C9F09_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00915 PYKB01000077.1 Protein Homology CDS 445 2139 . - 0 ID=cds-TGD05913.1;Parent=gene-C9F09_00915;Dbxref=NCBI_GP:TGD05913.1;Name=TGD05913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460954.1;locus_tag=C9F09_00915;product=hypothetical protein;protein_id=TGD05913.1;transl_table=11 PYKB01000077.1 Genbank pseudogene 2823 3101 . - . ID=gene-C9F09_00920;Name=C9F09_00920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00920;pseudo=true PYKB01000077.1 Protein Homology CDS 2823 3101 . - 0 ID=cds-C9F09_00920;Parent=gene-C9F09_00920;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950586.1;locus_tag=C9F09_00920;product=IS630 family transposase;pseudo=true;transl_table=11 ##sequence-region PYKB01000462.1 1 3187 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000462.1 Genbank region 1 3187 . + . ID=PYKB01000462.1:1..3187;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000462.1 Genbank gene 1 1068 . - . ID=gene-C9F09_05760;Name=C9F09_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05760;partial=true;start_range=.,1 PYKB01000462.1 Protein Homology CDS 1 1068 . - 0 ID=cds-TGC98437.1;Parent=gene-C9F09_05760;Dbxref=NCBI_GP:TGC98437.1;Name=TGC98437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=C9F09_05760;partial=true;product=phosphotransferase RcsD;protein_id=TGC98437.1;start_range=.,1;transl_table=11 PYKB01000462.1 Genbank gene 1281 1523 . - . ID=gene-C9F09_05765;Name=C9F09_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05765 PYKB01000462.1 Protein Homology CDS 1281 1523 . - 0 ID=cds-TGC98435.1;Parent=gene-C9F09_05765;Dbxref=NCBI_GP:TGC98435.1;Name=TGC98435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954100.1;locus_tag=C9F09_05765;product=hypothetical protein;protein_id=TGC98435.1;transl_table=11 PYKB01000462.1 Genbank gene 1797 2933 . + . ID=gene-C9F09_05770;Name=C9F09_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05770 PYKB01000462.1 Protein Homology CDS 1797 2933 . + 0 ID=cds-TGC98436.1;Parent=gene-C9F09_05770;Dbxref=NCBI_GP:TGC98436.1;Name=TGC98436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456812.1;locus_tag=C9F09_05770;product=porin OmpC;protein_id=TGC98436.1;transl_table=11 PYKB01000462.1 Genbank gene 3048 3187 . + . ID=gene-C9F09_05775;Name=C9F09_05775;end_range=3187,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05775;partial=true PYKB01000462.1 Protein Homology CDS 3048 3187 . + 0 ID=cds-TGC98438.1;Parent=gene-C9F09_05775;Dbxref=NCBI_GP:TGC98438.1;Name=TGC98438.1;Note=catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine%3B involved in the maintenance and/or assembly of sulfur clusters%3B periplasmic lipoporotein anchored to the inner membrane%3B part of the thiamine pyrophosphate biosynthesis pathway;end_range=3187,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456811.1;locus_tag=C9F09_05775;partial=true;product=FAD:protein FMN transferase ApbE;protein_id=TGC98438.1;transl_table=11 ##sequence-region PYKB01000755.1 1 3185 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000755.1 Genbank region 1 3185 . + . ID=PYKB01000755.1:1..3185;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000755.1 Genbank gene 1 247 . + . ID=gene-C9F09_11670;Name=C9F09_11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11670;partial=true;start_range=.,1 PYKB01000755.1 Protein Homology CDS 1 247 . + 1 ID=cds-TGC92866.1;Parent=gene-C9F09_11670;Dbxref=NCBI_GP:TGC92866.1;Name=TGC92866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454717.1;locus_tag=C9F09_11670;partial=true;product=hypothetical protein;protein_id=TGC92866.1;start_range=.,1;transl_table=11 PYKB01000755.1 Genbank gene 286 993 . - . ID=gene-C9F09_11675;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=C9F09_11675 PYKB01000755.1 Protein Homology CDS 286 993 . - 0 ID=cds-TGC92867.1;Parent=gene-C9F09_11675;Dbxref=NCBI_GP:TGC92867.1;Name=TGC92867.1;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454718.1;locus_tag=C9F09_11675;product=thiamine ABC transporter ATP-binding protein;protein_id=TGC92867.1;transl_table=11 PYKB01000755.1 Genbank gene 977 2587 . - . ID=gene-C9F09_11680;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;gene_synonym=sfuB;locus_tag=C9F09_11680 PYKB01000755.1 Protein Homology CDS 977 2587 . - 0 ID=cds-TGC92868.1;Parent=gene-C9F09_11680;Dbxref=NCBI_GP:TGC92868.1;Name=TGC92868.1;Note=permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=C9F09_11680;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=TGC92868.1;transl_table=11 PYKB01000755.1 Genbank gene 2563 3185 . - . ID=gene-C9F09_11685;Name=thiB;end_range=3185,.;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=C9F09_11685;partial=true PYKB01000755.1 Protein Homology CDS 2563 3185 . - 2 ID=cds-TGC92869.1;Parent=gene-C9F09_11685;Dbxref=NCBI_GP:TGC92869.1;Name=TGC92869.1;end_range=3185,.;gbkey=CDS;gene=thiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454720.1;locus_tag=C9F09_11685;partial=true;product=thiamine ABC transporter substrate binding subunit;protein_id=TGC92869.1;transl_table=11 ##sequence-region PYKB01001253.1 1 10853 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001253.1 Genbank region 1 10853 . + . ID=PYKB01001253.1:1..10853;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001253.1 Genbank pseudogene 38 589 . - . ID=gene-C9F09_21365;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=pseudogene;locus_tag=C9F09_21365;pseudo=true PYKB01001253.1 Protein Homology CDS 38 589 . - 0 ID=cds-C9F09_21365;Parent=gene-C9F09_21365;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=C9F09_21365;product=EF-P beta-lysylation protein EpmB;pseudo=true;transl_table=11 PYKB01001253.1 Genbank gene 630 1196 . + . ID=gene-C9F09_21370;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=C9F09_21370 PYKB01001253.1 Protein Homology CDS 630 1196 . + 0 ID=cds-TGC82334.1;Parent=gene-C9F09_21370;Dbxref=NCBI_GP:TGC82334.1;Name=TGC82334.1;gbkey=CDS;gene=efp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=C9F09_21370;product=elongation factor P;protein_id=TGC82334.1;transl_table=11 PYKB01001253.1 Genbank gene 1257 1391 . + . ID=gene-C9F09_21375;Name=C9F09_21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21375 PYKB01001253.1 Protein Homology CDS 1257 1391 . + 0 ID=cds-TGC82345.1;Parent=gene-C9F09_21375;Dbxref=NCBI_GP:TGC82345.1;Name=TGC82345.1;Note=acts as and antidote to the bacteriolytic entericidin B in the EcnAB toxin-antitoxin complex;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463199.2;locus_tag=C9F09_21375;product=entericidin A;protein_id=TGC82345.1;transl_table=11 PYKB01001253.1 Genbank pseudogene 1297 1477 . - . ID=gene-C9F09_21380;Name=C9F09_21380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21380;pseudo=true PYKB01001253.1 Protein Homology CDS 1297 1477 . - 0 ID=cds-C9F09_21380;Parent=gene-C9F09_21380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001332935.1;locus_tag=C9F09_21380;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001253.1 Genbank gene 1499 1645 . + . ID=gene-C9F09_21385;Name=C9F09_21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21385 PYKB01001253.1 Protein Homology CDS 1499 1645 . + 0 ID=cds-TGC82335.1;Parent=gene-C9F09_21385;Dbxref=NCBI_GP:TGC82335.1;Name=TGC82335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458775.1;locus_tag=C9F09_21385;product=entericidin B;protein_id=TGC82335.1;transl_table=11 PYKB01001253.1 Genbank gene 1676 2263 . - . ID=gene-C9F09_21390;Name=C9F09_21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21390 PYKB01001253.1 Protein Homology CDS 1676 2263 . - 0 ID=cds-TGC82346.1;Parent=gene-C9F09_21390;Dbxref=NCBI_GP:TGC82346.1;Name=TGC82346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458776.1;locus_tag=C9F09_21390;product=DNA-binding response regulator;protein_id=TGC82346.1;transl_table=11 PYKB01001253.1 Genbank gene 2519 2836 . + . ID=gene-C9F09_21395;Name=C9F09_21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21395 PYKB01001253.1 Protein Homology CDS 2519 2836 . + 0 ID=cds-TGC82336.1;Parent=gene-C9F09_21395;Dbxref=NCBI_GP:TGC82336.1;Name=TGC82336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458777.1;locus_tag=C9F09_21395;product=quaternary ammonium compound-resistance protein SugE;protein_id=TGC82336.1;transl_table=11 PYKB01001253.1 Genbank gene 2853 3386 . - . ID=gene-C9F09_21400;Name=C9F09_21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21400 PYKB01001253.1 Protein Homology CDS 2853 3386 . - 0 ID=cds-TGC82337.1;Parent=gene-C9F09_21400;Dbxref=NCBI_GP:TGC82337.1;Name=TGC82337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=C9F09_21400;product=hypothetical protein;protein_id=TGC82337.1;transl_table=11 PYKB01001253.1 Genbank gene 3497 3856 . - . ID=gene-C9F09_21405;Name=C9F09_21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21405 PYKB01001253.1 Protein Homology CDS 3497 3856 . - 0 ID=cds-TGC82338.1;Parent=gene-C9F09_21405;Dbxref=NCBI_GP:TGC82338.1;Name=TGC82338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458779.1;locus_tag=C9F09_21405;product=fumarate reductase subunit D;protein_id=TGC82338.1;transl_table=11 PYKB01001253.1 Genbank gene 3867 4262 . - . ID=gene-C9F09_21410;Name=C9F09_21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21410 PYKB01001253.1 Protein Homology CDS 3867 4262 . - 0 ID=cds-TGC82339.1;Parent=gene-C9F09_21410;Dbxref=NCBI_GP:TGC82339.1;Name=TGC82339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458780.1;locus_tag=C9F09_21410;product=fumarate reductase subunit C;protein_id=TGC82339.1;transl_table=11 PYKB01001253.1 Genbank gene 4273 5007 . - . ID=gene-C9F09_21415;Name=C9F09_21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21415 PYKB01001253.1 Protein Homology CDS 4273 5007 . - 0 ID=cds-TGC82340.1;Parent=gene-C9F09_21415;Dbxref=NCBI_GP:TGC82340.1;Name=TGC82340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463206.1;locus_tag=C9F09_21415;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=TGC82340.1;transl_table=11 PYKB01001253.1 Genbank gene 5000 6790 . - . ID=gene-C9F09_21420;Name=C9F09_21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21420 PYKB01001253.1 Protein Homology CDS 5000 6790 . - 0 ID=cds-TGC82341.1;Parent=gene-C9F09_21420;Dbxref=NCBI_GP:TGC82341.1;Name=TGC82341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458782.1;locus_tag=C9F09_21420;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=TGC82341.1;transl_table=11 PYKB01001253.1 Genbank gene 7113 8090 . + . ID=gene-C9F09_21425;Name=C9F09_21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21425 PYKB01001253.1 Protein Homology CDS 7113 8090 . + 0 ID=cds-TGC82342.1;Parent=gene-C9F09_21425;Dbxref=NCBI_GP:TGC82342.1;Name=TGC82342.1;Note=poxA%3B regulates pyruvate oxidase poxB;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=C9F09_21425;product=elongation factor P lysine(34) lysyltransferase;protein_id=TGC82342.1;transl_table=11 PYKB01001253.1 Genbank gene 8316 9818 . + . ID=gene-C9F09_21430;Name=C9F09_21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21430 PYKB01001253.1 Protein Homology CDS 8316 9818 . + 0 ID=cds-TGC82343.1;Parent=gene-C9F09_21430;Dbxref=NCBI_GP:TGC82343.1;Name=TGC82343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458784.1;locus_tag=C9F09_21430;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=TGC82343.1;transl_table=11 PYKB01001253.1 Genbank gene 9883 10203 . + . ID=gene-C9F09_21435;Name=C9F09_21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21435 PYKB01001253.1 Protein Homology CDS 9883 10203 . + 0 ID=cds-TGC82344.1;Parent=gene-C9F09_21435;Dbxref=NCBI_GP:TGC82344.1;Name=TGC82344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682126.1;locus_tag=C9F09_21435;product=hypothetical protein;protein_id=TGC82344.1;transl_table=11 PYKB01001253.1 Genbank gene 10340 10853 . - . ID=gene-C9F09_21440;Name=C9F09_21440;end_range=10853,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21440;partial=true PYKB01001253.1 Protein Homology CDS 10340 10853 . - 1 ID=cds-TGC82347.1;Parent=gene-C9F09_21440;Dbxref=NCBI_GP:TGC82347.1;Name=TGC82347.1;end_range=10853,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458786.1;locus_tag=C9F09_21440;partial=true;product=miniconductance mechanosensitive channel MscM;protein_id=TGC82347.1;transl_table=11 ##sequence-region PYKB01001583.1 1 3175 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001583.1 Genbank region 1 3175 . + . ID=PYKB01001583.1:1..3175;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001583.1 Genbank gene 1 240 . + . ID=gene-C9F09_27810;Name=C9F09_27810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27810;partial=true;start_range=.,1 PYKB01001583.1 Protein Homology CDS 1 240 . + 0 ID=cds-TGC75186.1;Parent=gene-C9F09_27810;Dbxref=NCBI_GP:TGC75186.1;Name=TGC75186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=C9F09_27810;partial=true;product=maleylacetoacetate isomerase;protein_id=TGC75186.1;start_range=.,1;transl_table=11 PYKB01001583.1 Genbank gene 255 1448 . + . ID=gene-C9F09_27815;Name=C9F09_27815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27815 PYKB01001583.1 Protein Homology CDS 255 1448 . + 0 ID=cds-TGC75187.1;Parent=gene-C9F09_27815;Dbxref=NCBI_GP:TGC75187.1;Name=TGC75187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=C9F09_27815;product=3-hydroxybenzoate 6-monooxygenase;protein_id=TGC75187.1;transl_table=11 PYKB01001583.1 Genbank gene 1557 2495 . + . ID=gene-C9F09_27820;Name=C9F09_27820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27820 PYKB01001583.1 Protein Homology CDS 1557 2495 . + 0 ID=cds-TGC75190.1;Parent=gene-C9F09_27820;Dbxref=NCBI_GP:TGC75190.1;Name=TGC75190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=C9F09_27820;product=tRNA dihydrouridine(16) synthase DusC;protein_id=TGC75190.1;transl_table=11 PYKB01001583.1 Genbank gene 2566 2763 . - . ID=gene-C9F09_27825;Name=C9F09_27825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27825 PYKB01001583.1 Protein Homology CDS 2566 2763 . - 0 ID=cds-TGC75188.1;Parent=gene-C9F09_27825;Dbxref=NCBI_GP:TGC75188.1;Name=TGC75188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954042.1;locus_tag=C9F09_27825;product=hypothetical protein;protein_id=TGC75188.1;transl_table=11 PYKB01001583.1 Genbank gene 2954 3175 . + . ID=gene-C9F09_27830;Name=C9F09_27830;end_range=3175,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27830;partial=true PYKB01001583.1 Protein Homology CDS 2954 3175 . + 0 ID=cds-TGC75189.1;Parent=gene-C9F09_27830;Dbxref=NCBI_GP:TGC75189.1;Name=TGC75189.1;end_range=3175,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456731.1;locus_tag=C9F09_27830;partial=true;product=hypothetical protein;protein_id=TGC75189.1;transl_table=11 ##sequence-region PYKB01000863.1 1 3165 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000863.1 Genbank region 1 3165 . + . ID=PYKB01000863.1:1..3165;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000863.1 Genbank gene 1 218 . + . ID=gene-C9F09_13975;Name=C9F09_13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13975;partial=true;start_range=.,1 PYKB01000863.1 Protein Homology CDS 1 218 . + 2 ID=cds-TGC90920.1;Parent=gene-C9F09_13975;Dbxref=NCBI_GP:TGC90920.1;Name=TGC90920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=C9F09_13975;partial=true;product=membrane protein insertion efficiency factor YidD;protein_id=TGC90920.1;start_range=.,1;transl_table=11 PYKB01000863.1 Genbank gene 221 1867 . + . ID=gene-C9F09_13980;Name=C9F09_13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13980 PYKB01000863.1 Protein Homology CDS 221 1867 . + 0 ID=cds-TGC90921.1;Parent=gene-C9F09_13980;Dbxref=NCBI_GP:TGC90921.1;Name=TGC90921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=C9F09_13980;product=membrane protein insertase YidC;protein_id=TGC90921.1;transl_table=11 PYKB01000863.1 Genbank gene 2008 3165 . + . ID=gene-C9F09_13985;Name=C9F09_13985;end_range=3165,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13985;partial=true PYKB01000863.1 Protein Homology CDS 2008 3165 . + 0 ID=cds-TGC90922.1;Parent=gene-C9F09_13985;Dbxref=NCBI_GP:TGC90922.1;Name=TGC90922.1;end_range=3165,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458100.1;locus_tag=C9F09_13985;partial=true;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=TGC90922.1;transl_table=11 ##sequence-region PYKB01000851.1 1 3156 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000851.1 Genbank region 1 3156 . + . ID=PYKB01000851.1:1..3156;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000851.1 Genbank gene 1 227 . + . ID=gene-C9F09_13565;Name=C9F09_13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13565;partial=true;start_range=.,1 PYKB01000851.1 Protein Homology CDS 1 227 . + 2 ID=cds-TGC91245.1;Parent=gene-C9F09_13565;Dbxref=NCBI_GP:TGC91245.1;Name=TGC91245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457028.1;locus_tag=C9F09_13565;partial=true;product=AI-2E family transporter;protein_id=TGC91245.1;start_range=.,1;transl_table=11 PYKB01000851.1 Genbank pseudogene 503 1690 . + . ID=gene-C9F09_13570;Name=C9F09_13570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13570;pseudo=true PYKB01000851.1 Protein Homology CDS 503 1690 . + 0 ID=cds-C9F09_13570;Parent=gene-C9F09_13570;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=C9F09_13570;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 PYKB01000851.1 Genbank gene 1758 3026 . + . ID=gene-C9F09_13575;Name=C9F09_13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13575 PYKB01000851.1 Protein Homology CDS 1758 3026 . + 0 ID=cds-TGC91246.1;Parent=gene-C9F09_13575;Dbxref=NCBI_GP:TGC91246.1;Name=TGC91246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457027.1;locus_tag=C9F09_13575;product=gluconate:proton symporter;protein_id=TGC91246.1;transl_table=11 PYKB01000851.1 Genbank gene 3032 3156 . + . ID=gene-C9F09_13580;Name=C9F09_13580;end_range=3156,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13580;partial=true PYKB01000851.1 Protein Homology CDS 3032 3156 . + 0 ID=cds-TGC91247.1;Parent=gene-C9F09_13580;Dbxref=NCBI_GP:TGC91247.1;Name=TGC91247.1;end_range=3156,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457026.1;locus_tag=C9F09_13580;partial=true;product=glycerate 2-kinase;protein_id=TGC91247.1;transl_table=11 ##sequence-region PYKB01000558.1 1 3152 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000558.1 Genbank region 1 3152 . + . ID=PYKB01000558.1:1..3152;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000558.1 Genbank gene 1 909 . - . ID=gene-C9F09_07715;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=C9F09_07715;partial=true;start_range=.,1 PYKB01000558.1 Protein Homology CDS 1 909 . - 0 ID=cds-TGC96322.1;Parent=gene-C9F09_07715;Dbxref=NCBI_GP:TGC96322.1;Name=TGC96322.1;gbkey=CDS;gene=csdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=C9F09_07715;partial=true;product=cysteine desulfurase CsdA;protein_id=TGC96322.1;start_range=.,1;transl_table=11 PYKB01000558.1 Genbank gene 1102 1329 . + . ID=gene-C9F09_07720;Name=C9F09_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07720 PYKB01000558.1 Protein Homology CDS 1102 1329 . + 0 ID=cds-TGC96323.1;Parent=gene-C9F09_07720;Dbxref=NCBI_GP:TGC96323.1;Name=TGC96323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457378.1;locus_tag=C9F09_07720;product=YgdI/YgdR family lipoprotein;protein_id=TGC96323.1;transl_table=11 PYKB01000558.1 Genbank gene 1676 2593 . + . ID=gene-C9F09_07725;Name=C9F09_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07725 PYKB01000558.1 Protein Homology CDS 1676 2593 . + 0 ID=cds-TGC96324.1;Parent=gene-C9F09_07725;Dbxref=NCBI_GP:TGC96324.1;Name=TGC96324.1;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=C9F09_07725;product=transcriptional regulator GcvA;protein_id=TGC96324.1;transl_table=11 PYKB01000558.1 Genbank gene 2612 3007 . + . ID=gene-C9F09_07730;Name=C9F09_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07730 PYKB01000558.1 Protein Homology CDS 2612 3007 . + 0 ID=cds-TGC96325.1;Parent=gene-C9F09_07730;Dbxref=NCBI_GP:TGC96325.1;Name=TGC96325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457376.1;locus_tag=C9F09_07730;product=hypothetical protein;protein_id=TGC96325.1;transl_table=11 PYKB01000558.1 Genbank gene 3000 3152 . + . ID=gene-C9F09_07735;Name=C9F09_07735;end_range=3152,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07735;partial=true PYKB01000558.1 Protein Homology CDS 3000 3152 . + 0 ID=cds-TGC96326.1;Parent=gene-C9F09_07735;Dbxref=NCBI_GP:TGC96326.1;Name=TGC96326.1;end_range=3152,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=C9F09_07735;partial=true;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=TGC96326.1;transl_table=11 ##sequence-region PYKB01000523.1 1 3150 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000523.1 Genbank region 1 3150 . + . ID=PYKB01000523.1:1..3150;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000523.1 Genbank gene 1 495 . + . ID=gene-C9F09_07035;Name=C9F09_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07035;partial=true;start_range=.,1 PYKB01000523.1 Protein Homology CDS 1 495 . + 0 ID=cds-TGC97114.1;Parent=gene-C9F09_07035;Dbxref=NCBI_GP:TGC97114.1;Name=TGC97114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456055.1;locus_tag=C9F09_07035;partial=true;product=arginine:ornithine antiporter;protein_id=TGC97114.1;start_range=.,1;transl_table=11 PYKB01000523.1 Genbank gene 557 892 . - . ID=gene-C9F09_07040;Name=C9F09_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07040 PYKB01000523.1 Protein Homology CDS 557 892 . - 0 ID=cds-TGC97115.1;Parent=gene-C9F09_07040;Dbxref=NCBI_GP:TGC97115.1;Name=TGC97115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456056.1;locus_tag=C9F09_07040;product=GlpM family protein;protein_id=TGC97115.1;transl_table=11 PYKB01000523.1 Genbank gene 1019 1750 . + . ID=gene-C9F09_07045;Name=C9F09_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07045 PYKB01000523.1 Protein Homology CDS 1019 1750 . + 0 ID=cds-TGC97116.1;Parent=gene-C9F09_07045;Dbxref=NCBI_GP:TGC97116.1;Name=TGC97116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=C9F09_07045;product=two-component system response regulator RstA;protein_id=TGC97116.1;transl_table=11 PYKB01000523.1 Genbank gene 1928 2113 . - . ID=gene-C9F09_07050;Name=C9F09_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07050 PYKB01000523.1 Protein Homology CDS 1928 2113 . - 0 ID=cds-TGC97117.1;Parent=gene-C9F09_07050;Dbxref=NCBI_GP:TGC97117.1;Name=TGC97117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537866.1;locus_tag=C9F09_07050;product=hypothetical protein;protein_id=TGC97117.1;transl_table=11 PYKB01000523.1 Genbank pseudogene 2230 3090 . + . ID=gene-C9F09_07055;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=pseudogene;locus_tag=C9F09_07055;pseudo=true PYKB01000523.1 Protein Homology CDS 2230 3090 . + 0 ID=cds-C9F09_07055;Parent=gene-C9F09_07055;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456059.1;locus_tag=C9F09_07055;product=porin OmpS2;pseudo=true;transl_table=11 ##sequence-region PYKB01000894.1 1 3143 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000894.1 Genbank region 1 3143 . + . ID=PYKB01000894.1:1..3143;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000894.1 Genbank gene 1 886 . + . ID=gene-C9F09_14680;Name=C9F09_14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14680;partial=true;start_range=.,1 PYKB01000894.1 Protein Homology CDS 1 886 . + 1 ID=cds-TGC90299.1;Parent=gene-C9F09_14680;Dbxref=NCBI_GP:TGC90299.1;Name=TGC90299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=C9F09_14680;partial=true;product=HTH-type transcriptional regulator EutR;protein_id=TGC90299.1;start_range=.,1;transl_table=11 PYKB01000894.1 Genbank gene 967 1161 . - . ID=gene-C9F09_14685;Name=C9F09_14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14685 PYKB01000894.1 Protein Homology CDS 967 1161 . - 0 ID=cds-TGC90300.1;Parent=gene-C9F09_14685;Dbxref=NCBI_GP:TGC90300.1;Name=TGC90300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531921.1;locus_tag=C9F09_14685;product=hypothetical protein;protein_id=TGC90300.1;transl_table=11 PYKB01000894.1 Genbank gene 1086 2363 . - . ID=gene-C9F09_14690;Name=C9F09_14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14690 PYKB01000894.1 Protein Homology CDS 1086 2363 . - 0 ID=cds-TGC90301.1;Parent=gene-C9F09_14690;Dbxref=NCBI_GP:TGC90301.1;Name=TGC90301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456988.1;locus_tag=C9F09_14690;product=DUF1963 domain-containing protein;protein_id=TGC90301.1;transl_table=11 PYKB01000894.1 Genbank gene 2492 2821 . - . ID=gene-C9F09_14695;Name=C9F09_14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14695 PYKB01000894.1 Protein Homology CDS 2492 2821 . - 0 ID=cds-TGC90302.1;Parent=gene-C9F09_14695;Dbxref=NCBI_GP:TGC90302.1;Name=TGC90302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461387.1;locus_tag=C9F09_14695;product=hypothetical protein;protein_id=TGC90302.1;transl_table=11 PYKB01000894.1 Genbank gene 2842 3143 . - . ID=gene-C9F09_14700;Name=C9F09_14700;end_range=3143,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14700;partial=true PYKB01000894.1 Protein Homology CDS 2842 3143 . - 2 ID=cds-TGC90303.1;Parent=gene-C9F09_14700;Dbxref=NCBI_GP:TGC90303.1;Name=TGC90303.1;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;end_range=3143,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456986.1;locus_tag=C9F09_14700;partial=true;product=coproporphyrinogen III oxidase;protein_id=TGC90303.1;transl_table=11 ##sequence-region PYKB01000480.1 1 3140 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000480.1 Genbank region 1 3140 . + . ID=PYKB01000480.1:1..3140;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000480.1 Genbank gene 1 354 . + . ID=gene-C9F09_06015;Name=C9F09_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06015;partial=true;start_range=.,1 PYKB01000480.1 Protein Homology CDS 1 354 . + 0 ID=cds-TGC98063.1;Parent=gene-C9F09_06015;Dbxref=NCBI_GP:TGC98063.1;Name=TGC98063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=C9F09_06015;partial=true;product=proline/betaine transporter;protein_id=TGC98063.1;start_range=.,1;transl_table=11 PYKB01000480.1 Genbank gene 424 513 . + . ID=gene-C9F09_06020;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=C9F09_06020 PYKB01000480.1 Protein Homology CDS 424 513 . + 0 ID=cds-TGC98064.1;Parent=gene-C9F09_06020;Dbxref=NCBI_GP:TGC98064.1;Name=TGC98064.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=C9F09_06020;product=LpxT activity modulator PmrR;protein_id=TGC98064.1;transl_table=11 PYKB01000480.1 Genbank gene 521 1591 . - . ID=gene-C9F09_06025;Name=C9F09_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06025 PYKB01000480.1 Protein Homology CDS 521 1591 . - 0 ID=cds-TGC98067.1;Parent=gene-C9F09_06025;Dbxref=NCBI_GP:TGC98067.1;Name=TGC98067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=C9F09_06025;product=two-component system sensor histidine kinase BasS;protein_id=TGC98067.1;transl_table=11 PYKB01000480.1 Genbank gene 1601 2269 . - . ID=gene-C9F09_06030;Name=C9F09_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06030 PYKB01000480.1 Protein Homology CDS 1601 2269 . - 0 ID=cds-TGC98065.1;Parent=gene-C9F09_06030;Dbxref=NCBI_GP:TGC98065.1;Name=TGC98065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=C9F09_06030;product=two-component system response regulator BasR;protein_id=TGC98065.1;transl_table=11 PYKB01000480.1 Genbank gene 2266 3140 . - . ID=gene-C9F09_06035;Name=C9F09_06035;end_range=3140,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06035;partial=true PYKB01000480.1 Protein Homology CDS 2266 3140 . - 2 ID=cds-TGC98066.1;Parent=gene-C9F09_06035;Dbxref=NCBI_GP:TGC98066.1;Name=TGC98066.1;end_range=3140,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458592.1;locus_tag=C9F09_06035;partial=true;product=phosphoethanolamine transferase EptA;protein_id=TGC98066.1;transl_table=11 ##sequence-region PYKB01001530.1 1 3131 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001530.1 Genbank region 1 3131 . + . ID=PYKB01001530.1:1..3131;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001530.1 Genbank gene 277 729 . + . ID=gene-C9F09_26625;Name=C9F09_26625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26625 PYKB01001530.1 Protein Homology CDS 277 729 . + 0 ID=cds-TGC76460.1;Parent=gene-C9F09_26625;Dbxref=NCBI_GP:TGC76460.1;Name=TGC76460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=C9F09_26625;product=dihydroneopterin triphosphate diphosphatase;protein_id=TGC76460.1;transl_table=11 PYKB01001530.1 Genbank gene 759 1499 . + . ID=gene-C9F09_26630;Name=C9F09_26630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26630 PYKB01001530.1 Protein Homology CDS 759 1499 . + 0 ID=cds-TGC76461.1;Parent=gene-C9F09_26630;Dbxref=NCBI_GP:TGC76461.1;Name=TGC76461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=C9F09_26630;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=TGC76461.1;transl_table=11 PYKB01001530.1 Genbank gene 1536 2057 . + . ID=gene-C9F09_26635;Name=C9F09_26635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26635 PYKB01001530.1 Protein Homology CDS 1536 2057 . + 0 ID=cds-TGC76462.1;Parent=gene-C9F09_26635;Dbxref=NCBI_GP:TGC76462.1;Name=TGC76462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=C9F09_26635;product=crossover junction endodeoxyribonuclease RuvC;protein_id=TGC76462.1;transl_table=11 PYKB01001530.1 Genbank gene 2088 3131 . + . ID=gene-C9F09_26640;Name=C9F09_26640;end_range=3131,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26640;partial=true PYKB01001530.1 Protein Homology CDS 2088 3131 . + 0 ID=cds-TGC76463.1;Parent=gene-C9F09_26640;Dbxref=NCBI_GP:TGC76463.1;Name=TGC76463.1;end_range=3131,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974705.1;locus_tag=C9F09_26640;partial=true;product=phosphate ABC transporter substrate-binding protein;protein_id=TGC76463.1;transl_table=11 ##sequence-region PYKB01001660.1 1 3127 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001660.1 Genbank region 1 3127 . + . ID=PYKB01001660.1:1..3127;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001660.1 Genbank pseudogene 57 698 . - . ID=gene-C9F09_28915;Name=C9F09_28915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28915;pseudo=true PYKB01001660.1 Protein Homology CDS 57 698 . - 0 ID=cds-C9F09_28915;Parent=gene-C9F09_28915;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=C9F09_28915;product=PTS sugar transporter;pseudo=true;transl_table=11 PYKB01001660.1 Genbank gene 724 1185 . - . ID=gene-C9F09_28920;Name=C9F09_28920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28920 PYKB01001660.1 Protein Homology CDS 724 1185 . - 0 ID=cds-TGC73307.1;Parent=gene-C9F09_28920;Dbxref=NCBI_GP:TGC73307.1;Name=TGC73307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=C9F09_28920;product=PTS mannose/fructose/sorbose transporter subunit IIB;protein_id=TGC73307.1;transl_table=11 PYKB01001660.1 Genbank gene 1200 1622 . - . ID=gene-C9F09_28925;Name=C9F09_28925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28925 PYKB01001660.1 Protein Homology CDS 1200 1622 . - 0 ID=cds-TGC73308.1;Parent=gene-C9F09_28925;Dbxref=NCBI_GP:TGC73308.1;Name=TGC73308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=C9F09_28925;product=PTS sugar transporter;protein_id=TGC73308.1;transl_table=11 PYKB01001660.1 Genbank pseudogene 1724 3121 . - . ID=gene-C9F09_28930;Name=C9F09_28930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28930;pseudo=true PYKB01001660.1 Protein Homology CDS 1724 3121 . - 0 ID=cds-C9F09_28930;Parent=gene-C9F09_28930;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=C9F09_28930;product=Fis family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKB01001016.1 1 3121 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001016.1 Genbank region 1 3121 . + . ID=PYKB01001016.1:1..3121;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001016.1 Genbank gene 1 289 . + . ID=gene-C9F09_16975;Name=C9F09_16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16975;partial=true;start_range=.,1 PYKB01001016.1 Protein Homology CDS 1 289 . + 1 ID=cds-TGC87882.1;Parent=gene-C9F09_16975;Dbxref=NCBI_GP:TGC87882.1;Name=TGC87882.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456804.1;locus_tag=C9F09_16975;partial=true;product=periplasmic nitrate reductase subunit alpha;protein_id=TGC87882.1;start_range=.,1;transl_table=11 PYKB01001016.1 Genbank gene 296 991 . + . ID=gene-C9F09_16980;Name=C9F09_16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16980 PYKB01001016.1 Protein Homology CDS 296 991 . + 0 ID=cds-TGC87883.1;Parent=gene-C9F09_16980;Dbxref=NCBI_GP:TGC87883.1;Name=TGC87883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=C9F09_16980;product=ferredoxin-type protein NapG;protein_id=TGC87883.1;transl_table=11 PYKB01001016.1 Genbank gene 978 1847 . + . ID=gene-C9F09_16985;Name=C9F09_16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16985 PYKB01001016.1 Protein Homology CDS 978 1847 . + 0 ID=cds-TGC87884.1;Parent=gene-C9F09_16985;Dbxref=NCBI_GP:TGC87884.1;Name=TGC87884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=C9F09_16985;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=TGC87884.1;transl_table=11 PYKB01001016.1 Genbank gene 1745 1963 . - . ID=gene-C9F09_16990;Name=C9F09_16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16990 PYKB01001016.1 Protein Homology CDS 1745 1963 . - 0 ID=cds-TGC87885.1;Parent=gene-C9F09_16990;Dbxref=NCBI_GP:TGC87885.1;Name=TGC87885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012776738.1;locus_tag=C9F09_16990;product=hypothetical protein;protein_id=TGC87885.1;transl_table=11 PYKB01001016.1 Genbank gene 1963 2412 . + . ID=gene-C9F09_16995;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=C9F09_16995 PYKB01001016.1 Protein Homology CDS 1963 2412 . + 0 ID=cds-TGC87886.1;Parent=gene-C9F09_16995;Dbxref=NCBI_GP:TGC87886.1;Name=TGC87886.1;Note=small subunit of periplasmic nitrate reductase%3B receives electrons from the membrane-bound NapC and passes them to NapA;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456801.1;locus_tag=C9F09_16995;product=nitrate reductase;protein_id=TGC87886.1;transl_table=11 PYKB01001016.1 Genbank gene 2422 3024 . + . ID=gene-C9F09_17000;Name=C9F09_17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17000 PYKB01001016.1 Protein Homology CDS 2422 3024 . + 0 ID=cds-TGC87887.1;Parent=gene-C9F09_17000;Dbxref=NCBI_GP:TGC87887.1;Name=TGC87887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=C9F09_17000;product=cytochrome c-type protein NapC;protein_id=TGC87887.1;transl_table=11 PYKB01001016.1 Genbank gene 3045 3121 . + . ID=gene-C9F09_17005;Name=C9F09_17005;end_range=3121,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17005;partial=true PYKB01001016.1 Protein Homology CDS 3045 3121 . + 0 ID=cds-TGC87888.1;Parent=gene-C9F09_17005;Dbxref=NCBI_GP:TGC87888.1;Name=TGC87888.1;end_range=3121,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=C9F09_17005;partial=true;product=heme ABC transporter ATP-binding protein CcmA;protein_id=TGC87888.1;transl_table=11 ##sequence-region PYKB01001208.1 1 10807 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001208.1 Genbank region 1 10807 . + . ID=PYKB01001208.1:1..10807;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001208.1 Genbank pseudogene 41 829 . - . ID=gene-C9F09_20540;Name=C9F09_20540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_20540;pseudo=true PYKB01001208.1 Protein Homology CDS 41 829 . - 0 ID=cds-C9F09_20540;Parent=gene-C9F09_20540;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=C9F09_20540;product=phosphoethanolamine transferase EptA;pseudo=true;transl_table=11 PYKB01001208.1 Genbank gene 963 2300 . - . ID=gene-C9F09_20545;Name=C9F09_20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20545 PYKB01001208.1 Protein Homology CDS 963 2300 . - 0 ID=cds-TGC83357.1;Parent=gene-C9F09_20545;Dbxref=NCBI_GP:TGC83357.1;Name=TGC83357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458593.1;locus_tag=C9F09_20545;product=arginine:agmatine antiporter;protein_id=TGC83357.1;transl_table=11 PYKB01001208.1 Genbank gene 2440 3201 . - . ID=gene-C9F09_20550;Name=C9F09_20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20550 PYKB01001208.1 Protein Homology CDS 2440 3201 . - 0 ID=cds-TGC83358.1;Parent=gene-C9F09_20550;Dbxref=NCBI_GP:TGC83358.1;Name=TGC83358.1;Note=regulates genes involved in arginine decarboxylase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458594.1;locus_tag=C9F09_20550;product=AraC family transcriptional regulator;protein_id=TGC83358.1;transl_table=11 PYKB01001208.1 Genbank gene 3498 5765 . - . ID=gene-C9F09_20555;Name=C9F09_20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20555 PYKB01001208.1 Protein Homology CDS 3498 5765 . - 0 ID=cds-TGC83362.1;Parent=gene-C9F09_20555;Dbxref=NCBI_GP:TGC83362.1;Name=TGC83362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002415251.6;locus_tag=C9F09_20555;product=arginine decarboxylase;protein_id=TGC83362.1;transl_table=11 PYKB01001208.1 Genbank gene 5998 6930 . - . ID=gene-C9F09_20560;Name=C9F09_20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20560 PYKB01001208.1 Protein Homology CDS 5998 6930 . - 0 ID=cds-TGC83359.1;Parent=gene-C9F09_20560;Dbxref=NCBI_GP:TGC83359.1;Name=TGC83359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458596.1;locus_tag=C9F09_20560;product=transcriptional regulator MelR;protein_id=TGC83359.1;transl_table=11 PYKB01001208.1 Genbank gene 7199 8554 . + . ID=gene-C9F09_20565;Name=C9F09_20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20565 PYKB01001208.1 Protein Homology CDS 7199 8554 . + 0 ID=cds-TGC83360.1;Parent=gene-C9F09_20565;Dbxref=NCBI_GP:TGC83360.1;Name=TGC83360.1;Note=catalyses the hydrolysis of terminal non-reducing alpha-D-galactose residues in alpha-D-galactosides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=C9F09_20565;product=alpha-glucosidase/alpha-galactosidase;protein_id=TGC83360.1;transl_table=11 PYKB01001208.1 Genbank gene 8638 10068 . + . ID=gene-C9F09_20570;Name=C9F09_20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20570 PYKB01001208.1 Protein Homology CDS 8638 10068 . + 0 ID=cds-TGC83361.1;Parent=gene-C9F09_20570;Dbxref=NCBI_GP:TGC83361.1;Name=TGC83361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458598.1;locus_tag=C9F09_20570;product=melibiose:sodium transporter MelB;protein_id=TGC83361.1;transl_table=11 PYKB01001208.1 Genbank gene 10157 10807 . - . ID=gene-C9F09_20575;Name=C9F09_20575;end_range=10807,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20575;partial=true PYKB01001208.1 Protein Homology CDS 10157 10807 . - 0 ID=cds-TGC83363.1;Parent=gene-C9F09_20575;Dbxref=NCBI_GP:TGC83363.1;Name=TGC83363.1;Note=catalyzes the formation of malate from fumerate;end_range=10807,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458599.1;locus_tag=C9F09_20575;partial=true;product=fumarate hydratase;protein_id=TGC83363.1;transl_table=11 ##sequence-region PYKB01001686.1 1 3115 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001686.1 Genbank region 1 3115 . + . ID=PYKB01001686.1:1..3115;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001686.1 Genbank gene 99 1064 . - . ID=gene-C9F09_29385;Name=C9F09_29385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29385 PYKB01001686.1 Protein Homology CDS 99 1064 . - 0 ID=cds-TGC72617.1;Parent=gene-C9F09_29385;Dbxref=NCBI_GP:TGC72617.1;Name=TGC72617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=C9F09_29385;product=glucokinase;protein_id=TGC72617.1;transl_table=11 PYKB01001686.1 Genbank gene 1268 2503 . + . ID=gene-C9F09_29390;Name=C9F09_29390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29390 PYKB01001686.1 Protein Homology CDS 1268 2503 . + 0 ID=cds-TGC72618.1;Parent=gene-C9F09_29390;Dbxref=NCBI_GP:TGC72618.1;Name=TGC72618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=C9F09_29390;product=ion channel protein;protein_id=TGC72618.1;transl_table=11 PYKB01001686.1 Genbank gene 2523 3115 . - . ID=gene-C9F09_29395;Name=C9F09_29395;end_range=3115,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29395;partial=true PYKB01001686.1 Protein Homology CDS 2523 3115 . - 2 ID=cds-TGC72619.1;Parent=gene-C9F09_29395;Dbxref=NCBI_GP:TGC72619.1;Name=TGC72619.1;end_range=3115,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456948.1;locus_tag=C9F09_29395;partial=true;product=hypothetical protein;protein_id=TGC72619.1;transl_table=11 ##sequence-region PYKB01000138.1 1 3109 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000138.1 Genbank region 1 3109 . + . ID=PYKB01000138.1:1..3109;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000138.1 Genbank gene 15 1376 . + . ID=gene-C9F09_01565;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=C9F09_01565 PYKB01000138.1 Protein Homology CDS 15 1376 . + 0 ID=cds-TGD04666.1;Parent=gene-C9F09_01565;Dbxref=NCBI_GP:TGD04666.1;Name=TGD04666.1;gbkey=CDS;gene=mpl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675397.1;locus_tag=C9F09_01565;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=TGD04666.1;transl_table=11 PYKB01000138.1 Genbank gene 1373 1687 . - . ID=gene-C9F09_01570;Name=C9F09_01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01570 PYKB01000138.1 Protein Homology CDS 1373 1687 . - 0 ID=cds-TGD04664.1;Parent=gene-C9F09_01570;Dbxref=NCBI_GP:TGD04664.1;Name=TGD04664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147693.1;locus_tag=C9F09_01570;product=hypothetical protein;protein_id=TGD04664.1;transl_table=11 PYKB01000138.1 Genbank gene 1867 2700 . + . ID=gene-C9F09_01575;Name=C9F09_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01575 PYKB01000138.1 Protein Homology CDS 1867 2700 . + 0 ID=cds-TGD04665.1;Parent=gene-C9F09_01575;Dbxref=NCBI_GP:TGD04665.1;Name=TGD04665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463278.1;locus_tag=C9F09_01575;product=MurR/RpiR family transcriptional regulator;protein_id=TGD04665.1;transl_table=11 PYKB01000138.1 Genbank gene 2751 3109 . - . ID=gene-C9F09_01580;Name=C9F09_01580;end_range=3109,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01580;partial=true PYKB01000138.1 Protein Homology CDS 2751 3109 . - 2 ID=cds-TGD04667.1;Parent=gene-C9F09_01580;Dbxref=NCBI_GP:TGD04667.1;Name=TGD04667.1;end_range=3109,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463279.1;locus_tag=C9F09_01580;partial=true;product=MFS transporter;protein_id=TGD04667.1;transl_table=11 ##sequence-region PYKB01000534.1 1 3109 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000534.1 Genbank region 1 3109 . + . ID=PYKB01000534.1:1..3109;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000534.1 Genbank gene 1 690 . + . ID=gene-C9F09_07265;Name=C9F09_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07265;partial=true;start_range=.,1 PYKB01000534.1 Protein Homology CDS 1 690 . + 0 ID=cds-TGC96857.1;Parent=gene-C9F09_07265;Dbxref=NCBI_GP:TGC96857.1;Name=TGC96857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=C9F09_07265;partial=true;product=3-oxo-tetronate kinase;protein_id=TGC96857.1;start_range=.,1;transl_table=11 PYKB01000534.1 Genbank gene 687 1325 . + . ID=gene-C9F09_07270;Name=C9F09_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07270 PYKB01000534.1 Protein Homology CDS 687 1325 . + 0 ID=cds-TGC96858.1;Parent=gene-C9F09_07270;Dbxref=NCBI_GP:TGC96858.1;Name=TGC96858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457307.1;locus_tag=C9F09_07270;product=aldolase;protein_id=TGC96858.1;transl_table=11 PYKB01000534.1 Genbank gene 1330 2106 . + . ID=gene-C9F09_07275;Name=C9F09_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07275 PYKB01000534.1 Protein Homology CDS 1330 2106 . + 0 ID=cds-TGC96859.1;Parent=gene-C9F09_07275;Dbxref=NCBI_GP:TGC96859.1;Name=TGC96859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=C9F09_07275;product=hypothetical protein;protein_id=TGC96859.1;transl_table=11 PYKB01000534.1 Genbank gene 2146 3096 . + . ID=gene-C9F09_07280;Name=C9F09_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07280 PYKB01000534.1 Protein Homology CDS 2146 3096 . + 0 ID=cds-TGC96860.1;Parent=gene-C9F09_07280;Dbxref=NCBI_GP:TGC96860.1;Name=TGC96860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=C9F09_07280;product=hypothetical protein;protein_id=TGC96860.1;transl_table=11 ##sequence-region PYKB01001501.1 1 3094 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001501.1 Genbank region 1 3094 . + . ID=PYKB01001501.1:1..3094;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001501.1 Genbank gene 1 419 . + . ID=gene-C9F09_26060;Name=C9F09_26060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26060;partial=true;start_range=.,1 PYKB01001501.1 Protein Homology CDS 1 419 . + 2 ID=cds-TGC77226.1;Parent=gene-C9F09_26060;Dbxref=NCBI_GP:TGC77226.1;Name=TGC77226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457209.1;locus_tag=C9F09_26060;partial=true;product=proline/glycine betaine ABC transporter substrate-binding protein ProX;protein_id=TGC77226.1;start_range=.,1;transl_table=11 PYKB01001501.1 Genbank gene 584 1768 . + . ID=gene-C9F09_26065;Name=C9F09_26065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26065 PYKB01001501.1 Protein Homology CDS 584 1768 . + 0 ID=cds-TGC77223.1;Parent=gene-C9F09_26065;Dbxref=NCBI_GP:TGC77223.1;Name=TGC77223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457210.1;locus_tag=C9F09_26065;product=MFS transporter;protein_id=TGC77223.1;transl_table=11 PYKB01001501.1 Genbank gene 2265 2795 . + . ID=gene-C9F09_26070;Name=C9F09_26070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26070 PYKB01001501.1 Protein Homology CDS 2265 2795 . + 0 ID=cds-TGC77224.1;Parent=gene-C9F09_26070;Dbxref=NCBI_GP:TGC77224.1;Name=TGC77224.1;Note=DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457211.1;locus_tag=C9F09_26070;product=transcriptional repressor MprA;protein_id=TGC77224.1;transl_table=11 PYKB01001501.1 Genbank gene 2922 3094 . + . ID=gene-C9F09_26075;Name=C9F09_26075;end_range=3094,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26075;partial=true PYKB01001501.1 Protein Homology CDS 2922 3094 . + 0 ID=cds-TGC77225.1;Parent=gene-C9F09_26075;Dbxref=NCBI_GP:TGC77225.1;Name=TGC77225.1;Note=with ErmA and TolC forms a multidrug efflux system;end_range=3094,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=C9F09_26075;partial=true;product=multidrug export protein EmrA;protein_id=TGC77225.1;transl_table=11 ##sequence-region PYKB01001095.1 1 3091 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001095.1 Genbank region 1 3091 . + . ID=PYKB01001095.1:1..3091;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001095.1 Genbank pseudogene 19 897 . + . ID=gene-C9F09_18365;Name=C9F09_18365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18365;pseudo=true PYKB01001095.1 Protein Homology CDS 19 897 . + 0 ID=cds-C9F09_18365;Parent=gene-C9F09_18365;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=C9F09_18365;product=crotonobetainyl-CoA dehydrogenase;pseudo=true;transl_table=11 PYKB01001095.1 Genbank gene 1009 2226 . + . ID=gene-C9F09_18370;Name=C9F09_18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18370 PYKB01001095.1 Protein Homology CDS 1009 2226 . + 0 ID=cds-TGC86172.1;Parent=gene-C9F09_18370;Dbxref=NCBI_GP:TGC86172.1;Name=TGC86172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=C9F09_18370;product=L-carnitine CoA-transferase;protein_id=TGC86172.1;transl_table=11 PYKB01001095.1 Genbank gene 2289 3091 . + . ID=gene-C9F09_18375;Name=caiC;end_range=3091,.;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=C9F09_18375;partial=true PYKB01001095.1 Protein Homology CDS 2289 3091 . + 0 ID=cds-TGC86173.1;Parent=gene-C9F09_18375;Dbxref=NCBI_GP:TGC86173.1;Name=TGC86173.1;end_range=3091,.;gbkey=CDS;gene=caiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=C9F09_18375;partial=true;product=crotonobetaine/carnitine-CoA ligase;protein_id=TGC86173.1;transl_table=11 ##sequence-region PYKB01000895.1 1 3088 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000895.1 Genbank region 1 3088 . + . ID=PYKB01000895.1:1..3088;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000895.1 Genbank gene 1 406 . - . ID=gene-C9F09_14705;Name=C9F09_14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14705;partial=true;start_range=.,1 PYKB01000895.1 Protein Homology CDS 1 406 . - 0 ID=cds-TGC90293.1;Parent=gene-C9F09_14705;Dbxref=NCBI_GP:TGC90293.1;Name=TGC90293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=C9F09_14705;partial=true;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=TGC90293.1;start_range=.,1;transl_table=11 PYKB01000895.1 Genbank gene 626 844 . + . ID=gene-C9F09_14710;Name=C9F09_14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14710 PYKB01000895.1 Protein Homology CDS 626 844 . + 0 ID=cds-TGC90294.1;Parent=gene-C9F09_14710;Dbxref=NCBI_GP:TGC90294.1;Name=TGC90294.1;Note=required for phi X174 lysis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=C9F09_14710;product=lysis protein;protein_id=TGC90294.1;transl_table=11 PYKB01000895.1 Genbank gene 863 1042 . - . ID=gene-C9F09_14715;Name=C9F09_14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14715 PYKB01000895.1 Protein Homology CDS 863 1042 . - 0 ID=cds-TGC90295.1;Parent=gene-C9F09_14715;Dbxref=NCBI_GP:TGC90295.1;Name=TGC90295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001925745.1;locus_tag=C9F09_14715;product=hypothetical protein;protein_id=TGC90295.1;transl_table=11 PYKB01000895.1 Genbank gene 1033 1623 . - . ID=gene-C9F09_14720;Name=C9F09_14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14720 PYKB01000895.1 Protein Homology CDS 1033 1623 . - 0 ID=cds-TGC90296.1;Parent=gene-C9F09_14720;Dbxref=NCBI_GP:TGC90296.1;Name=TGC90296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=C9F09_14720;product=peptidylprolyl isomerase;protein_id=TGC90296.1;transl_table=11 PYKB01000895.1 Genbank gene 1718 1918 . - . ID=gene-C9F09_14725;Name=C9F09_14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14725 PYKB01000895.1 Protein Homology CDS 1718 1918 . - 0 ID=cds-TGC90297.1;Parent=gene-C9F09_14725;Dbxref=NCBI_GP:TGC90297.1;Name=TGC90297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458444.1;locus_tag=C9F09_14725;product=hypothetical protein;protein_id=TGC90297.1;transl_table=11 PYKB01000895.1 Genbank gene 1929 3088 . - . ID=gene-C9F09_14730;Name=C9F09_14730;end_range=3088,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14730;partial=true PYKB01000895.1 Protein Homology CDS 1929 3088 . - 2 ID=cds-TGC90298.1;Parent=gene-C9F09_14730;Dbxref=NCBI_GP:TGC90298.1;Name=TGC90298.1;Note=involved in potassium efflux;end_range=3088,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=C9F09_14730;partial=true;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=TGC90298.1;transl_table=11 ##sequence-region PYKB01000753.1 1 3075 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000753.1 Genbank region 1 3075 . + . ID=PYKB01000753.1:1..3075;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000753.1 Genbank gene 1 787 . - . ID=gene-C9F09_11630;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=C9F09_11630;partial=true;start_range=.,1 PYKB01000753.1 Protein Homology CDS 1 787 . - 0 ID=cds-TGC92892.1;Parent=gene-C9F09_11630;Dbxref=NCBI_GP:TGC92892.1;Name=TGC92892.1;gbkey=CDS;gene=foxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=C9F09_11630;partial=true;product=ferrioxamine B receptor FoxA;protein_id=TGC92892.1;start_range=.,1;transl_table=11 PYKB01000753.1 Genbank gene 933 1937 . - . ID=gene-C9F09_11635;Name=C9F09_11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11635 PYKB01000753.1 Protein Homology CDS 933 1937 . - 0 ID=cds-TGC92890.1;Parent=gene-C9F09_11635;Dbxref=NCBI_GP:TGC92890.1;Name=TGC92890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=C9F09_11635;product=AraC family transcriptional regulator;protein_id=TGC92890.1;transl_table=11 PYKB01000753.1 Genbank gene 2143 2274 . - . ID=gene-C9F09_11640;Name=C9F09_11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11640 PYKB01000753.1 Protein Homology CDS 2143 2274 . - 0 ID=cds-TGC92891.1;Parent=gene-C9F09_11640;Dbxref=NCBI_GP:TGC92891.1;Name=TGC92891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.2;locus_tag=C9F09_11640;product=DUF2474 domain-containing protein;protein_id=TGC92891.1;transl_table=11 PYKB01000753.1 Genbank gene 2274 3075 . - . ID=gene-C9F09_11645;Name=C9F09_11645;end_range=3075,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11645;partial=true PYKB01000753.1 Protein Homology CDS 2274 3075 . - 1 ID=cds-TGC92893.1;Parent=gene-C9F09_11645;Dbxref=NCBI_GP:TGC92893.1;Name=TGC92893.1;end_range=3075,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=C9F09_11645;partial=true;product=ubiquinol oxidase subunit II;protein_id=TGC92893.1;transl_table=11 ##sequence-region PYKB01001121.1 1 3071 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001121.1 Genbank region 1 3071 . + . ID=PYKB01001121.1:1..3071;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001121.1 Genbank gene 1 77 . + . ID=gene-C9F09_18835;Name=C9F09_18835;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_18835 PYKB01001121.1 tRNAscan-SE tRNA 1 77 . + . ID=rna-C9F09_18835;Parent=gene-C9F09_18835;anticodon=(pos:35..37);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_18835;product=tRNA-Asp PYKB01001121.1 tRNAscan-SE exon 1 77 . + . ID=exon-C9F09_18835-1;Parent=rna-C9F09_18835;anticodon=(pos:35..37);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_18835;product=tRNA-Asp PYKB01001121.1 Genbank gene 242 1045 . + . ID=gene-C9F09_18840;Name=C9F09_18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18840 PYKB01001121.1 Protein Homology CDS 242 1045 . + 0 ID=cds-TGC85482.1;Parent=gene-C9F09_18840;Dbxref=NCBI_GP:TGC85482.1;Name=TGC85482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=C9F09_18840;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=TGC85482.1;transl_table=11 PYKB01001121.1 Genbank gene 1066 1980 . - . ID=gene-C9F09_18845;Name=C9F09_18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18845 PYKB01001121.1 Protein Homology CDS 1066 1980 . - 0 ID=cds-TGC85483.1;Parent=gene-C9F09_18845;Dbxref=NCBI_GP:TGC85483.1;Name=TGC85483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=C9F09_18845;product=LysR family transcriptional regulator;protein_id=TGC85483.1;transl_table=11 PYKB01001121.1 Genbank gene 2085 3071 . + . ID=gene-C9F09_18850;Name=C9F09_18850;end_range=3071,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18850;partial=true PYKB01001121.1 Protein Homology CDS 2085 3071 . + 0 ID=cds-TGC85484.1;Parent=gene-C9F09_18850;Dbxref=NCBI_GP:TGC85484.1;Name=TGC85484.1;end_range=3071,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=C9F09_18850;partial=true;product=MFS sugar transporter;protein_id=TGC85484.1;transl_table=11 ##sequence-region PYKB01001308.1 1 3061 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001308.1 Genbank region 1 3061 . + . ID=PYKB01001308.1:1..3061;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001308.1 Genbank gene 1 474 . - . ID=gene-C9F09_22470;Name=C9F09_22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22470;partial=true;start_range=.,1 PYKB01001308.1 Protein Homology CDS 1 474 . - 0 ID=cds-TGC81404.1;Parent=gene-C9F09_22470;Dbxref=NCBI_GP:TGC81404.1;Name=TGC81404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458976.1;locus_tag=C9F09_22470;partial=true;product=metal-dependent hydrolase;protein_id=TGC81404.1;start_range=.,1;transl_table=11 PYKB01001308.1 Genbank gene 471 1544 . - . ID=gene-C9F09_22475;Name=C9F09_22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22475 PYKB01001308.1 Protein Homology CDS 471 1544 . - 0 ID=cds-TGC81405.1;Parent=gene-C9F09_22475;Dbxref=NCBI_GP:TGC81405.1;Name=TGC81405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=C9F09_22475;product=patatin family protein;protein_id=TGC81405.1;transl_table=11 PYKB01001308.1 Genbank gene 1668 1847 . - . ID=gene-C9F09_22480;Name=C9F09_22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22480 PYKB01001308.1 Protein Homology CDS 1668 1847 . - 0 ID=cds-TGC81406.1;Parent=gene-C9F09_22480;Dbxref=NCBI_GP:TGC81406.1;Name=TGC81406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458974.1;locus_tag=C9F09_22480;product=DUF1328 domain-containing protein;protein_id=TGC81406.1;transl_table=11 PYKB01001308.1 Genbank gene 1958 2575 . - . ID=gene-C9F09_22485;Name=C9F09_22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22485 PYKB01001308.1 Protein Homology CDS 1958 2575 . - 0 ID=cds-TGC81407.1;Parent=gene-C9F09_22485;Dbxref=NCBI_GP:TGC81407.1;Name=TGC81407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458973.1;locus_tag=C9F09_22485;product=molecular chaperone OsmY;protein_id=TGC81407.1;transl_table=11 ##sequence-region PYKB01000062.1 1 3046 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000062.1 Genbank region 1 3046 . + . ID=PYKB01000062.1:1..3046;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000062.1 Genbank gene 1 2120 . + . ID=gene-C9F09_00685;Name=C9F09_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00685;partial=true;start_range=.,1 PYKB01000062.1 Protein Homology CDS 1 2120 . + 2 ID=cds-TGD06247.1;Parent=gene-C9F09_00685;Dbxref=NCBI_GP:TGD06247.1;Name=TGD06247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454657.1;locus_tag=C9F09_00685;partial=true;product=isoleucine--tRNA ligase;protein_id=TGD06247.1;start_range=.,1;transl_table=11 PYKB01000062.1 Genbank gene 2120 2620 . + . ID=gene-C9F09_00690;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=C9F09_00690 PYKB01000062.1 Protein Homology CDS 2120 2620 . + 0 ID=cds-TGD06248.1;Parent=gene-C9F09_00690;Dbxref=NCBI_GP:TGD06248.1;Name=TGD06248.1;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;gbkey=CDS;gene=lspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=C9F09_00690;product=lipoprotein signal peptidase;protein_id=TGD06248.1;transl_table=11 PYKB01000062.1 Genbank gene 2775 3046 . + . ID=gene-C9F09_00695;Name=C9F09_00695;end_range=3046,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00695;partial=true PYKB01000062.1 Protein Homology CDS 2775 3046 . + 0 ID=cds-TGD06249.1;Parent=gene-C9F09_00695;Dbxref=NCBI_GP:TGD06249.1;Name=TGD06249.1;end_range=3046,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454659.1;locus_tag=C9F09_00695;partial=true;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=TGD06249.1;transl_table=11 ##sequence-region PYKB01000172.1 1 10790 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000172.1 Genbank region 1 10790 . + . ID=PYKB01000172.1:1..10790;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000172.1 Genbank gene 1 381 . - . ID=gene-C9F09_01925;Name=C9F09_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01925;partial=true;start_range=.,1 PYKB01000172.1 Protein Homology CDS 1 381 . - 0 ID=cds-TGD04003.1;Parent=gene-C9F09_01925;Dbxref=NCBI_GP:TGD04003.1;Name=TGD04003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417111.1;locus_tag=C9F09_01925;partial=true;product=integrase;protein_id=TGD04003.1;start_range=.,1;transl_table=11 PYKB01000172.1 Genbank gene 563 925 . - . ID=gene-C9F09_01930;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=C9F09_01930 PYKB01000172.1 cmsearch tmRNA 563 925 . - . ID=rna-C9F09_01930;Parent=gene-C9F09_01930;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00023,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_01930;product=transfer-messenger RNA PYKB01000172.1 cmsearch exon 563 925 . - . ID=exon-C9F09_01930-1;Parent=rna-C9F09_01930;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00023,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_01930;product=transfer-messenger RNA PYKB01000172.1 Genbank gene 997 2160 . - . ID=gene-C9F09_01935;Name=C9F09_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01935 PYKB01000172.1 Protein Homology CDS 997 2160 . - 0 ID=cds-TGD04006.1;Parent=gene-C9F09_01935;Dbxref=NCBI_GP:TGD04006.1;Name=TGD04006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=C9F09_01935;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=TGD04006.1;transl_table=11 PYKB01000172.1 Genbank gene 2168 4348 . - . ID=gene-C9F09_01940;Name=C9F09_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01940 PYKB01000172.1 Protein Homology CDS 2168 4348 . - 0 ID=cds-TGD04004.1;Parent=gene-C9F09_01940;Dbxref=NCBI_GP:TGD04004.1;Name=TGD04004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=C9F09_01940;product=type I secretion system permease/ATPase;protein_id=TGD04004.1;transl_table=11 PYKB01000172.1 Genbank gene 4345 5754 . - . ID=gene-C9F09_01945;Name=C9F09_01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01945 PYKB01000172.1 Protein Homology CDS 4345 5754 . - 0 ID=cds-TGD04005.1;Parent=gene-C9F09_01945;Dbxref=NCBI_GP:TGD04005.1;Name=TGD04005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=C9F09_01945;product=type I secretion protein TolC;protein_id=TGD04005.1;transl_table=11 PYKB01000172.1 Genbank pseudogene 5819 10720 . - . ID=gene-C9F09_01950;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=pseudogene;locus_tag=C9F09_01950;pseudo=true PYKB01000172.1 Protein Homology CDS 5819 10720 . - 0 ID=cds-C9F09_01950;Parent=gene-C9F09_01950;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457158.1;locus_tag=C9F09_01950;product=biofilm-associated protein BapA;pseudo=true;transl_table=11 ##sequence-region PYKB01001610.1 1 3046 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001610.1 Genbank region 1 3046 . + . ID=PYKB01001610.1:1..3046;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001610.1 Genbank pseudogene 1 821 . + . ID=gene-C9F09_28220;Name=C9F09_28220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28220;pseudo=true PYKB01001610.1 Protein Homology CDS 1 821 . + 2 ID=cds-C9F09_28220;Parent=gene-C9F09_28220;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=C9F09_28220;product=fructokinase;pseudo=true;transl_table=11 PYKB01001610.1 Genbank gene 841 2013 . - . ID=gene-C9F09_28225;Name=C9F09_28225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28225 PYKB01001610.1 Protein Homology CDS 841 2013 . - 0 ID=cds-TGC74656.1;Parent=gene-C9F09_28225;Dbxref=NCBI_GP:TGC74656.1;Name=TGC74656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=C9F09_28225;product=MFS transporter AraJ;protein_id=TGC74656.1;transl_table=11 PYKB01001610.1 Genbank gene 2185 3046 . - . ID=gene-C9F09_28230;Name=C9F09_28230;end_range=3046,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28230;partial=true PYKB01001610.1 Protein Homology CDS 2185 3046 . - 1 ID=cds-TGC74657.1;Parent=gene-C9F09_28230;Dbxref=NCBI_GP:TGC74657.1;Name=TGC74657.1;Note=with SbcD cleaves DNA hairpin structures%3B also has 5' single-strand endonuclease activity;end_range=3046,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=C9F09_28230;partial=true;product=exonuclease subunit SbcC;protein_id=TGC74657.1;transl_table=11 ##sequence-region PYKB01001593.1 1 3034 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001593.1 Genbank region 1 3034 . + . ID=PYKB01001593.1:1..3034;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001593.1 Genbank gene 1 923 . - . ID=gene-C9F09_28045;Name=C9F09_28045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28045;partial=true;start_range=.,1 PYKB01001593.1 Protein Homology CDS 1 923 . - 0 ID=cds-TGC75025.1;Parent=gene-C9F09_28045;Dbxref=NCBI_GP:TGC75025.1;Name=TGC75025.1;Note=catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=C9F09_28045;partial=true;product=L-arabinose isomerase;protein_id=TGC75025.1;start_range=.,1;transl_table=11 PYKB01001593.1 Genbank gene 934 2643 . - . ID=gene-C9F09_28050;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=C9F09_28050 PYKB01001593.1 Protein Homology CDS 934 2643 . - 0 ID=cds-TGC75026.1;Parent=gene-C9F09_28050;Dbxref=NCBI_GP:TGC75026.1;Name=TGC75026.1;gbkey=CDS;gene=araB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454715.1;locus_tag=C9F09_28050;product=ribulokinase;protein_id=TGC75026.1;transl_table=11 ##sequence-region PYKB01000700.1 1 3033 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000700.1 Genbank region 1 3033 . + . ID=PYKB01000700.1:1..3033;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000700.1 Genbank pseudogene 53 553 . - . ID=gene-C9F09_10645;Name=C9F09_10645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10645;pseudo=true PYKB01000700.1 Protein Homology CDS 53 553 . - 0 ID=cds-C9F09_10645;Parent=gene-C9F09_10645;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456681.1;locus_tag=C9F09_10645;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000700.1 Genbank gene 564 1280 . - . ID=gene-C9F09_10650;Name=C9F09_10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10650 PYKB01000700.1 Protein Homology CDS 564 1280 . - 0 ID=cds-TGC93710.1;Parent=gene-C9F09_10650;Dbxref=NCBI_GP:TGC93710.1;Name=TGC93710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=C9F09_10650;product=DUF1266 domain-containing protein;protein_id=TGC93710.1;transl_table=11 PYKB01000700.1 Genbank gene 1280 2164 . - . ID=gene-C9F09_10655;Name=C9F09_10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10655 PYKB01000700.1 Protein Homology CDS 1280 2164 . - 0 ID=cds-TGC93711.1;Parent=gene-C9F09_10655;Dbxref=NCBI_GP:TGC93711.1;Name=TGC93711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461077.1;locus_tag=C9F09_10655;product=cytoplasmic protein;protein_id=TGC93711.1;transl_table=11 PYKB01000700.1 Genbank pseudogene 2164 2482 . - . ID=gene-C9F09_10660;Name=C9F09_10660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10660;pseudo=true PYKB01000700.1 Protein Homology CDS 2164 2482 . - 0 ID=cds-C9F09_10660;Parent=gene-C9F09_10660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989203.1;locus_tag=C9F09_10660;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000700.1 Genbank gene 2751 3033 . - . ID=gene-C9F09_10665;Name=C9F09_10665;end_range=3033,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10665;partial=true PYKB01000700.1 Protein Homology CDS 2751 3033 . - 1 ID=cds-TGC93712.1;Parent=gene-C9F09_10665;Dbxref=NCBI_GP:TGC93712.1;Name=TGC93712.1;end_range=3033,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456677.1;locus_tag=C9F09_10665;partial=true;product=hypothetical protein;protein_id=TGC93712.1;transl_table=11 ##sequence-region PYKB01000705.1 1 3027 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000705.1 Genbank region 1 3027 . + . ID=PYKB01000705.1:1..3027;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000705.1 Genbank pseudogene 69 431 . + . ID=gene-C9F09_10720;Name=C9F09_10720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10720;pseudo=true PYKB01000705.1 Protein Homology CDS 69 431 . + 0 ID=cds-C9F09_10720;Parent=gene-C9F09_10720;Note=part of the microcin C transport system%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456775.1;locus_tag=C9F09_10720;product=microcin ABC transporter permease;pseudo=true;transl_table=11 PYKB01000705.1 Genbank gene 433 2022 . + . ID=gene-C9F09_10725;Name=C9F09_10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10725 PYKB01000705.1 Protein Homology CDS 433 2022 . + 0 ID=cds-TGC93639.1;Parent=gene-C9F09_10725;Dbxref=NCBI_GP:TGC93639.1;Name=TGC93639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456776.1;locus_tag=C9F09_10725;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=TGC93639.1;transl_table=11 PYKB01000705.1 Genbank gene 2026 2370 . - . ID=gene-C9F09_10730;Name=C9F09_10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10730 PYKB01000705.1 Protein Homology CDS 2026 2370 . - 0 ID=cds-TGC93640.1;Parent=gene-C9F09_10730;Dbxref=NCBI_GP:TGC93640.1;Name=TGC93640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456777.1;locus_tag=C9F09_10730;product=hypothetical protein;protein_id=TGC93640.1;transl_table=11 PYKB01000705.1 Genbank gene 2535 2729 . - . ID=gene-C9F09_10735;Name=C9F09_10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10735 PYKB01000705.1 Protein Homology CDS 2535 2729 . - 0 ID=cds-TGC93641.1;Parent=gene-C9F09_10735;Dbxref=NCBI_GP:TGC93641.1;Name=TGC93641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005117972.1;locus_tag=C9F09_10735;product=hypothetical protein;protein_id=TGC93641.1;transl_table=11 PYKB01000705.1 Genbank gene 2761 3027 . - . ID=gene-C9F09_10740;Name=C9F09_10740;end_range=3027,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10740;partial=true PYKB01000705.1 Protein Homology CDS 2761 3027 . - 0 ID=cds-TGC93642.1;Parent=gene-C9F09_10740;Dbxref=NCBI_GP:TGC93642.1;Name=TGC93642.1;end_range=3027,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456779.1;locus_tag=C9F09_10740;partial=true;product=bicyclomycin resistance protein;protein_id=TGC93642.1;transl_table=11 ##sequence-region PYKB01000751.1 1 3023 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000751.1 Genbank region 1 3023 . + . ID=PYKB01000751.1:1..3023;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000751.1 Genbank pseudogene 49 210 . + . ID=gene-C9F09_11595;Name=C9F09_11595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11595;pseudo=true PYKB01000751.1 Protein Homology CDS 49 210 . + 0 ID=cds-C9F09_11595;Parent=gene-C9F09_11595;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=C9F09_11595;product=transcriptional regulator NrdR;pseudo=true;transl_table=11 PYKB01000751.1 Genbank gene 214 1317 . + . ID=gene-C9F09_11600;Name=C9F09_11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11600 PYKB01000751.1 Protein Homology CDS 214 1317 . + 0 ID=cds-TGC92912.1;Parent=gene-C9F09_11600;Dbxref=NCBI_GP:TGC92912.1;Name=TGC92912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=C9F09_11600;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=TGC92912.1;transl_table=11 PYKB01000751.1 Genbank gene 1406 1876 . + . ID=gene-C9F09_11605;Name=C9F09_11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11605 PYKB01000751.1 Protein Homology CDS 1406 1876 . + 0 ID=cds-TGC92913.1;Parent=gene-C9F09_11605;Dbxref=NCBI_GP:TGC92913.1;Name=TGC92913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455011.1;locus_tag=C9F09_11605;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=TGC92913.1;transl_table=11 PYKB01000751.1 Genbank gene 1897 2316 . + . ID=gene-C9F09_11610;Name=C9F09_11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11610 PYKB01000751.1 Protein Homology CDS 1897 2316 . + 0 ID=cds-TGC92914.1;Parent=gene-C9F09_11610;Dbxref=NCBI_GP:TGC92914.1;Name=TGC92914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=C9F09_11610;product=N utilization substance protein B;protein_id=TGC92914.1;transl_table=11 PYKB01000751.1 Genbank gene 2395 3023 . + . ID=gene-C9F09_11615;Name=thiL;end_range=3023,.;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=C9F09_11615;partial=true PYKB01000751.1 Protein Homology CDS 2395 3023 . + 0 ID=cds-TGC92915.1;Parent=gene-C9F09_11615;Dbxref=NCBI_GP:TGC92915.1;Name=TGC92915.1;end_range=3023,.;gbkey=CDS;gene=thiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=C9F09_11615;partial=true;product=thiamine-phosphate kinase;protein_id=TGC92915.1;transl_table=11 ##sequence-region PYKB01001229.1 1 3022 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001229.1 Genbank region 1 3022 . + . ID=PYKB01001229.1:1..3022;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001229.1 Genbank gene 1 793 . - . ID=gene-C9F09_20790;Name=C9F09_20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20790;partial=true;start_range=.,1 PYKB01001229.1 Protein Homology CDS 1 793 . - 0 ID=cds-TGC82907.1;Parent=gene-C9F09_20790;Dbxref=NCBI_GP:TGC82907.1;Name=TGC82907.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020244583.1;locus_tag=C9F09_20790;partial=true;product=phosphogluconate dehydratase;protein_id=TGC82907.1;start_range=.,1;transl_table=11 PYKB01001229.1 Genbank gene 1028 2503 . - . ID=gene-C9F09_20795;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=C9F09_20795 PYKB01001229.1 Protein Homology CDS 1028 2503 . - 0 ID=cds-TGC82906.1;Parent=gene-C9F09_20795;Dbxref=NCBI_GP:TGC82906.1;Name=TGC82906.1;gbkey=CDS;gene=zwf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=C9F09_20795;product=glucose-6-phosphate dehydrogenase;protein_id=TGC82906.1;transl_table=11 PYKB01001229.1 Genbank gene 2476 2661 . + . ID=gene-C9F09_20800;Name=C9F09_20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20800 PYKB01001229.1 Protein Homology CDS 2476 2661 . + 0 ID=cds-TGC82908.1;Parent=gene-C9F09_20800;Dbxref=NCBI_GP:TGC82908.1;Name=TGC82908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540243.1;locus_tag=C9F09_20800;product=hypothetical protein;protein_id=TGC82908.1;transl_table=11 PYKB01001229.1 Genbank pseudogene 2845 2925 . + . ID=gene-C9F09_20805;Name=C9F09_20805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_20805;pseudo=true PYKB01001229.1 Protein Homology CDS 2845 2925 . + 0 ID=cds-C9F09_20805;Parent=gene-C9F09_20805;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456454.1;locus_tag=C9F09_20805;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000592.1 1 3021 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000592.1 Genbank region 1 3021 . + . ID=PYKB01000592.1:1..3021;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000592.1 Genbank gene 1 717 . + . ID=gene-C9F09_08625;Name=C9F09_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08625;partial=true;start_range=.,1 PYKB01000592.1 Protein Homology CDS 1 717 . + 0 ID=cds-TGC95536.1;Parent=gene-C9F09_08625;Dbxref=NCBI_GP:TGC95536.1;Name=TGC95536.1;Note=with EutC catalyzes the formation of acetaldehyde and ammonia from ethanolamine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=C9F09_08625;partial=true;product=ethanolamine ammonia lyase large subunit;protein_id=TGC95536.1;start_range=.,1;transl_table=11 PYKB01000592.1 Genbank gene 736 1632 . + . ID=gene-C9F09_08630;Name=C9F09_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08630 PYKB01000592.1 Protein Homology CDS 736 1632 . + 0 ID=cds-TGC95537.1;Parent=gene-C9F09_08630;Dbxref=NCBI_GP:TGC95537.1;Name=TGC95537.1;Note=catalyzes the formation of acetaldehyde from ethanolamine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456992.1;locus_tag=C9F09_08630;product=ethanolamine ammonia lyase small subunit;protein_id=TGC95537.1;transl_table=11 PYKB01000592.1 Genbank gene 1642 2301 . + . ID=gene-C9F09_08635;Name=C9F09_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08635 PYKB01000592.1 Protein Homology CDS 1642 2301 . + 0 ID=cds-TGC95538.1;Parent=gene-C9F09_08635;Dbxref=NCBI_GP:TGC95538.1;Name=TGC95538.1;Note=carboxysome structural protein involved in ethanolamine utilization;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456991.1;locus_tag=C9F09_08635;product=microcompartment protein EutL;protein_id=TGC95538.1;transl_table=11 PYKB01000592.1 Genbank gene 2314 2808 . + . ID=gene-C9F09_08640;Name=C9F09_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08640 PYKB01000592.1 Protein Homology CDS 2314 2808 . + 0 ID=cds-TGC95539.1;Parent=gene-C9F09_08640;Dbxref=NCBI_GP:TGC95539.1;Name=TGC95539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=C9F09_08640;product=ethanolamine utilization protein EutK;protein_id=TGC95539.1;transl_table=11 ##sequence-region PYKB01000454.1 1 3018 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000454.1 Genbank region 1 3018 . + . ID=PYKB01000454.1:1..3018;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000454.1 Genbank gene 357 713 . + . ID=gene-C9F09_05650;Name=C9F09_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05650 PYKB01000454.1 Protein Homology CDS 357 713 . + 0 ID=cds-TGC98554.1;Parent=gene-C9F09_05650;Dbxref=NCBI_GP:TGC98554.1;Name=TGC98554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=C9F09_05650;product=endolysin;protein_id=TGC98554.1;transl_table=11 PYKB01000454.1 Genbank gene 719 1321 . - . ID=gene-C9F09_05655;Name=C9F09_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05655 PYKB01000454.1 Protein Homology CDS 719 1321 . - 0 ID=cds-TGC98555.1;Parent=gene-C9F09_05655;Dbxref=NCBI_GP:TGC98555.1;Name=TGC98555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=C9F09_05655;product=DNA-binding response regulator;protein_id=TGC98555.1;transl_table=11 PYKB01000454.1 Genbank gene 1498 1713 . - . ID=gene-C9F09_05660;Name=C9F09_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05660 PYKB01000454.1 Protein Homology CDS 1498 1713 . - 0 ID=cds-TGC98556.1;Parent=gene-C9F09_05660;Dbxref=NCBI_GP:TGC98556.1;Name=TGC98556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219331.1;locus_tag=C9F09_05660;product=hypothetical protein;protein_id=TGC98556.1;transl_table=11 PYKB01000454.1 Genbank gene 1949 2851 . + . ID=gene-C9F09_05665;Name=C9F09_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05665 PYKB01000454.1 Protein Homology CDS 1949 2851 . + 0 ID=cds-TGC98557.1;Parent=gene-C9F09_05665;Dbxref=NCBI_GP:TGC98557.1;Name=TGC98557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458312.1;locus_tag=C9F09_05665;product=LysR family transcriptional regulator;protein_id=TGC98557.1;transl_table=11 ##sequence-region PYKB01001521.1 1 3014 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001521.1 Genbank region 1 3014 . + . ID=PYKB01001521.1:1..3014;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001521.1 Genbank pseudogene 1 287 . + . ID=gene-C9F09_26375;Name=C9F09_26375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_26375;pseudo=true PYKB01001521.1 Protein Homology CDS 1 287 . + 2 ID=cds-C9F09_26375;Parent=gene-C9F09_26375;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455616.1;locus_tag=C9F09_26375;product=pyrimidine utilization regulatory protein R;pseudo=true;transl_table=11 PYKB01001521.1 Genbank gene 284 679 . - . ID=gene-C9F09_26380;Name=C9F09_26380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26380 PYKB01001521.1 Protein Homology CDS 284 679 . - 0 ID=cds-TGC76752.1;Parent=gene-C9F09_26380;Dbxref=NCBI_GP:TGC76752.1;Name=TGC76752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455617.1;locus_tag=C9F09_26380;product=hypothetical protein;protein_id=TGC76752.1;transl_table=11 PYKB01001521.1 Genbank pseudogene 738 3014 . - . ID=gene-C9F09_26385;Name=C9F09_26385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_26385;pseudo=true PYKB01001521.1 Protein Homology CDS 738 3014 . - 0 ID=cds-C9F09_26385;Parent=gene-C9F09_26385;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=C9F09_26385;product=delta-1-pyrroline-5-carboxylate dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKB01000023.1 1 3013 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000023.1 Genbank region 1 3013 . + . ID=PYKB01000023.1:1..3013;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000023.1 Genbank gene 1 764 . - . ID=gene-C9F09_00250;Name=C9F09_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00250;partial=true;start_range=.,1 PYKB01000023.1 Protein Homology CDS 1 764 . - 0 ID=cds-TGD06943.1;Parent=gene-C9F09_00250;Dbxref=NCBI_GP:TGD06943.1;Name=TGD06943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=C9F09_00250;partial=true;product=two-component system sensor histidine kinase RstB;protein_id=TGD06943.1;start_range=.,1;transl_table=11 PYKB01000023.1 Genbank gene 875 2581 . - . ID=gene-C9F09_00255;Name=C9F09_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00255 PYKB01000023.1 Protein Homology CDS 875 2581 . - 0 ID=cds-TGD06944.1;Parent=gene-C9F09_00255;Dbxref=NCBI_GP:TGD06944.1;Name=TGD06944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456060.1;locus_tag=C9F09_00255;product=amidohydrolase;protein_id=TGD06944.1;transl_table=11 PYKB01000023.1 Genbank pseudogene 2734 2985 . - . ID=gene-C9F09_00260;Name=C9F09_00260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00260;pseudo=true PYKB01000023.1 Protein Homology CDS 2734 2985 . - 0 ID=cds-C9F09_00260;Parent=gene-C9F09_00260;Note=allows for ions and hydrophilic solutes to cross the outer membrane%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=C9F09_00260;product=porin;pseudo=true;transl_table=11 ##sequence-region PYKB01000843.1 1 10734 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000843.1 Genbank region 1 10734 . + . ID=PYKB01000843.1:1..10734;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000843.1 Genbank gene 1 152 . + . ID=gene-C9F09_13350;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=C9F09_13350;partial=true;start_range=.,1 PYKB01000843.1 Protein Homology CDS 1 152 . + 2 ID=cds-TGC91401.1;Parent=gene-C9F09_13350;Dbxref=NCBI_GP:TGC91401.1;Name=TGC91401.1;Note=hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP;gbkey=CDS;gene=apaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454700.1;locus_tag=C9F09_13350;partial=true;product=diadenosine tetraphosphatase;protein_id=TGC91401.1;start_range=.,1;transl_table=11 PYKB01000843.1 Genbank gene 258 737 . - . ID=gene-C9F09_13355;Name=C9F09_13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13355 PYKB01000843.1 Protein Homology CDS 258 737 . - 0 ID=cds-TGC91402.1;Parent=gene-C9F09_13355;Dbxref=NCBI_GP:TGC91402.1;Name=TGC91402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459092.1;locus_tag=C9F09_13355;product=type 3 dihydrofolate reductase;protein_id=TGC91402.1;transl_table=11 PYKB01000843.1 Genbank gene 737 850 . - . ID=gene-C9F09_13360;Name=C9F09_13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13360 PYKB01000843.1 Protein Homology CDS 737 850 . - 0 ID=cds-TGC91403.1;Parent=gene-C9F09_13360;Dbxref=NCBI_GP:TGC91403.1;Name=TGC91403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001338230.1;locus_tag=C9F09_13360;product=dihydrofolate reductase;protein_id=TGC91403.1;transl_table=11 PYKB01000843.1 Genbank gene 935 2797 . - . ID=gene-C9F09_13365;Name=C9F09_13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13365 PYKB01000843.1 Protein Homology CDS 935 2797 . - 0 ID=cds-TGC91404.1;Parent=gene-C9F09_13365;Dbxref=NCBI_GP:TGC91404.1;Name=TGC91404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=C9F09_13365;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=TGC91404.1;transl_table=11 PYKB01000843.1 Genbank gene 2790 3320 . - . ID=gene-C9F09_13370;Name=C9F09_13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13370 PYKB01000843.1 Protein Homology CDS 2790 3320 . - 0 ID=cds-TGC91405.1;Parent=gene-C9F09_13370;Dbxref=NCBI_GP:TGC91405.1;Name=TGC91405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=C9F09_13370;product=glutathione-regulated potassium-efflux system ancillary protein KefF;protein_id=TGC91405.1;transl_table=11 PYKB01000843.1 Genbank pseudogene 3441 3521 . + . ID=gene-C9F09_13375;Name=C9F09_13375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13375;pseudo=true PYKB01000843.1 Protein Homology CDS 3441 3521 . + 0 ID=cds-C9F09_13375;Parent=gene-C9F09_13375;Note=catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=C9F09_13375;product=carnitinyl-CoA dehydratase;pseudo=true;transl_table=11 PYKB01000843.1 Genbank gene 3710 3838 . - . ID=gene-C9F09_13380;Name=C9F09_13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13380 PYKB01000843.1 Protein Homology CDS 3710 3838 . - 0 ID=cds-TGC91406.1;Parent=gene-C9F09_13380;Dbxref=NCBI_GP:TGC91406.1;Name=TGC91406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219073.1;locus_tag=C9F09_13380;product=DNA metabolism protein;protein_id=TGC91406.1;transl_table=11 PYKB01000843.1 Genbank gene 3873 5762 . - . ID=gene-C9F09_13385;Name=C9F09_13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13385 PYKB01000843.1 Protein Homology CDS 3873 5762 . - 0 ID=cds-TGC91407.1;Parent=gene-C9F09_13385;Dbxref=NCBI_GP:TGC91407.1;Name=TGC91407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=C9F09_13385;product=phosphatase;protein_id=TGC91407.1;transl_table=11 PYKB01000843.1 Genbank gene 6256 6450 . - . ID=gene-C9F09_13390;Name=C9F09_13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13390 PYKB01000843.1 Protein Homology CDS 6256 6450 . - 0 ID=cds-TGC91408.1;Parent=gene-C9F09_13390;Dbxref=NCBI_GP:TGC91408.1;Name=TGC91408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446547.1;locus_tag=C9F09_13390;product=hypothetical protein;protein_id=TGC91408.1;transl_table=11 PYKB01000843.1 Genbank gene 6660 6950 . + . ID=gene-C9F09_13395;Name=C9F09_13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13395 PYKB01000843.1 Protein Homology CDS 6660 6950 . + 0 ID=cds-TGC91409.1;Parent=gene-C9F09_13395;Dbxref=NCBI_GP:TGC91409.1;Name=TGC91409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454692.1;locus_tag=C9F09_13395;product=DUF1471 domain-containing protein;protein_id=TGC91409.1;transl_table=11 PYKB01000843.1 Genbank gene 7174 7590 . - . ID=gene-C9F09_13400;Name=C9F09_13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13400 PYKB01000843.1 Protein Homology CDS 7174 7590 . - 0 ID=cds-TGC91410.1;Parent=gene-C9F09_13400;Dbxref=NCBI_GP:TGC91410.1;Name=TGC91410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=C9F09_13400;product=hypothetical protein;protein_id=TGC91410.1;transl_table=11 PYKB01000843.1 Genbank gene 7884 8114 . - . ID=gene-C9F09_13405;Name=C9F09_13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13405 PYKB01000843.1 Protein Homology CDS 7884 8114 . - 0 ID=cds-TGC91411.1;Parent=gene-C9F09_13405;Dbxref=NCBI_GP:TGC91411.1;Name=TGC91411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454690.1;locus_tag=C9F09_13405;product=YgdI/YgdR family lipoprotein;protein_id=TGC91411.1;transl_table=11 PYKB01000843.1 Genbank gene 8203 9543 . - . ID=gene-C9F09_13410;Name=C9F09_13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13410 PYKB01000843.1 Protein Homology CDS 8203 9543 . - 0 ID=cds-TGC91414.1;Parent=gene-C9F09_13410;Dbxref=NCBI_GP:TGC91414.1;Name=TGC91414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=C9F09_13410;product=MFS transporter;protein_id=TGC91414.1;transl_table=11 PYKB01000843.1 Genbank gene 9690 9977 . - . ID=gene-C9F09_13415;Name=C9F09_13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13415 PYKB01000843.1 Protein Homology CDS 9690 9977 . - 0 ID=cds-TGC91412.1;Parent=gene-C9F09_13415;Dbxref=NCBI_GP:TGC91412.1;Name=TGC91412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=C9F09_13415;product=ferredoxin-like protein FixX;protein_id=TGC91412.1;transl_table=11 PYKB01000843.1 Genbank gene 9974 10734 . - . ID=gene-C9F09_13420;Name=C9F09_13420;end_range=10734,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13420;partial=true PYKB01000843.1 Protein Homology CDS 9974 10734 . - 2 ID=cds-TGC91413.1;Parent=gene-C9F09_13420;Dbxref=NCBI_GP:TGC91413.1;Name=TGC91413.1;Note=FAD/NAD(P)-binding domain%3B possibly part of an electron transfer system required for anaerobic carnitine reduction;end_range=10734,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454687.1;locus_tag=C9F09_13420;partial=true;product=FAD-dependent oxidoreductase;protein_id=TGC91413.1;transl_table=11 ##sequence-region PYKB01001662.1 1 3001 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001662.1 Genbank region 1 3001 . + . ID=PYKB01001662.1:1..3001;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001662.1 Genbank gene 1 1178 . - . ID=gene-C9F09_28940;Name=C9F09_28940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28940;partial=true;start_range=.,1 PYKB01001662.1 Protein Homology CDS 1 1178 . - 0 ID=cds-TGC73239.1;Parent=gene-C9F09_28940;Dbxref=NCBI_GP:TGC73239.1;Name=TGC73239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=C9F09_28940;partial=true;product=aryl-sulfate sulfotransferase;protein_id=TGC73239.1;start_range=.,1;transl_table=11 PYKB01001662.1 Genbank gene 1634 1951 . - . ID=gene-C9F09_28945;Name=C9F09_28945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28945 PYKB01001662.1 Protein Homology CDS 1634 1951 . - 0 ID=cds-TGC73237.1;Parent=gene-C9F09_28945;Dbxref=NCBI_GP:TGC73237.1;Name=TGC73237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457954.1;locus_tag=C9F09_28945;product=met repressor;protein_id=TGC73237.1;transl_table=11 PYKB01001662.1 Genbank gene 2216 3001 . + . ID=gene-C9F09_28950;Name=C9F09_28950;end_range=3001,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28950;partial=true PYKB01001662.1 Protein Homology CDS 2216 3001 . + 0 ID=cds-TGC73238.1;Parent=gene-C9F09_28950;Dbxref=NCBI_GP:TGC73238.1;Name=TGC73238.1;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;end_range=3001,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=C9F09_28950;partial=true;product=cystathionine gamma-synthase;protein_id=TGC73238.1;transl_table=11 ##sequence-region PYKB01000926.1 1 3001 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000926.1 Genbank region 1 3001 . + . ID=PYKB01000926.1:1..3001;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000926.1 Genbank gene 1 3001 . + . ID=gene-C9F09_15280;Name=C9F09_15280;end_range=3001,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15280;partial=true;start_range=.,1 PYKB01000926.1 Protein Homology CDS 1 3001 . + 2 ID=cds-TGC89760.1;Parent=gene-C9F09_15280;Dbxref=NCBI_GP:TGC89760.1;Name=TGC89760.1;end_range=3001,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=C9F09_15280;partial=true;product=transcription-repair coupling factor;protein_id=TGC89760.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001460.1 1 2998 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001460.1 Genbank region 1 2998 . + . ID=PYKB01001460.1:1..2998;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001460.1 Genbank gene 1 621 . + . ID=gene-C9F09_25420;Name=C9F09_25420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25420;partial=true;start_range=.,1 PYKB01001460.1 Protein Homology CDS 1 621 . + 0 ID=cds-TGC77999.1;Parent=gene-C9F09_25420;Dbxref=NCBI_GP:TGC77999.1;Name=TGC77999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456549.1;locus_tag=C9F09_25420;partial=true;product=drug/metabolite exporter YedA;protein_id=TGC77999.1;start_range=.,1;transl_table=11 PYKB01001460.1 Genbank gene 610 1080 . - . ID=gene-C9F09_25425;Name=C9F09_25425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25425 PYKB01001460.1 Protein Homology CDS 610 1080 . - 0 ID=cds-TGC78000.1;Parent=gene-C9F09_25425;Dbxref=NCBI_GP:TGC78000.1;Name=TGC78000.1;Note=DNA mismatch endonuclease%3B recognizes and repairs T:G mismatches;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=C9F09_25425;product=very short patch repair endonuclease;protein_id=TGC78000.1;transl_table=11 PYKB01001460.1 Genbank gene 1061 2491 . - . ID=gene-C9F09_25430;Name=C9F09_25430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25430 PYKB01001460.1 Protein Homology CDS 1061 2491 . - 0 ID=cds-TGC78001.1;Parent=gene-C9F09_25430;Dbxref=NCBI_GP:TGC78001.1;Name=TGC78001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=C9F09_25430;product=DNA (cytosine-5-)-methyltransferase;protein_id=TGC78001.1;transl_table=11 PYKB01001460.1 Genbank gene 2565 2998 . - . ID=gene-C9F09_25435;Name=C9F09_25435;end_range=2998,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25435;partial=true PYKB01001460.1 Protein Homology CDS 2565 2998 . - 2 ID=cds-TGC78002.1;Parent=gene-C9F09_25435;Dbxref=NCBI_GP:TGC78002.1;Name=TGC78002.1;end_range=2998,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=C9F09_25435;partial=true;product=hydrolase;protein_id=TGC78002.1;transl_table=11 ##sequence-region PYKB01001702.1 1 2997 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001702.1 Genbank region 1 2997 . + . ID=PYKB01001702.1:1..2997;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001702.1 Genbank pseudogene 67 486 . + . ID=gene-C9F09_29775;Name=C9F09_29775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29775;pseudo=true PYKB01001702.1 Protein Homology CDS 67 486 . + 0 ID=cds-C9F09_29775;Parent=gene-C9F09_29775;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=C9F09_29775;product=cytidine deaminase;pseudo=true;transl_table=11 PYKB01001702.1 Genbank gene 663 1382 . + . ID=gene-C9F09_29780;Name=C9F09_29780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29780 PYKB01001702.1 Protein Homology CDS 663 1382 . + 0 ID=cds-TGC72027.1;Parent=gene-C9F09_29780;Dbxref=NCBI_GP:TGC72027.1;Name=TGC72027.1;Note=involved in vancomycin sensitivity and other barrier functions of the cell envelope;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=C9F09_29780;product=outer membrane permeability protein SanA;protein_id=TGC72027.1;transl_table=11 PYKB01001702.1 Genbank gene 1379 1624 . + . ID=gene-C9F09_29785;Name=C9F09_29785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29785 PYKB01001702.1 Protein Homology CDS 1379 1624 . + 0 ID=cds-TGC72028.1;Parent=gene-C9F09_29785;Dbxref=NCBI_GP:TGC72028.1;Name=TGC72028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456744.1;locus_tag=C9F09_29785;product=DUF2542 domain-containing protein;protein_id=TGC72028.1;transl_table=11 PYKB01001702.1 Genbank gene 1829 2989 . + . ID=gene-C9F09_29790;Name=C9F09_29790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29790 PYKB01001702.1 Protein Homology CDS 1829 2989 . + 0 ID=cds-TGC72029.1;Parent=gene-C9F09_29790;Dbxref=NCBI_GP:TGC72029.1;Name=TGC72029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001720779.1;locus_tag=C9F09_29790;product=dihydropyrimidine dehydrogenase;protein_id=TGC72029.1;transl_table=11 ##sequence-region PYKB01000715.1 1 2996 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000715.1 Genbank region 1 2996 . + . ID=PYKB01000715.1:1..2996;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000715.1 Genbank gene 1 1681 . - . ID=gene-C9F09_10930;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=C9F09_10930;partial=true;start_range=.,1 PYKB01000715.1 Protein Homology CDS 1 1681 . - 0 ID=cds-TGC93502.1;Parent=gene-C9F09_10930;Dbxref=NCBI_GP:TGC93502.1;Name=TGC93502.1;gbkey=CDS;gene=aspS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456468.1;locus_tag=C9F09_10930;partial=true;product=aspartate--tRNA ligase;protein_id=TGC93502.1;start_range=.,1;transl_table=11 PYKB01000715.1 Genbank gene 2006 2572 . + . ID=gene-C9F09_10935;Name=C9F09_10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10935 PYKB01000715.1 Protein Homology CDS 2006 2572 . + 0 ID=cds-TGC93503.1;Parent=gene-C9F09_10935;Dbxref=NCBI_GP:TGC93503.1;Name=TGC93503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456469.1;locus_tag=C9F09_10935;product=hydrolase;protein_id=TGC93503.1;transl_table=11 PYKB01000715.1 Genbank pseudogene 2658 2768 . - . ID=gene-C9F09_10940;Name=C9F09_10940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10940;pseudo=true PYKB01000715.1 Protein Homology CDS 2658 2768 . - 0 ID=cds-C9F09_10940;Parent=gene-C9F09_10940;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005098689.1;locus_tag=C9F09_10940;product=preprotein translocase subunit SecY;pseudo=true;transl_table=11 ##sequence-region PYKB01001743.1 1 2995 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001743.1 Genbank region 1 2995 . + . ID=PYKB01001743.1:1..2995;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001743.1 Genbank gene 1 1104 . - . ID=gene-C9F09_30535;Name=C9F09_30535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30535;partial=true;start_range=.,1 PYKB01001743.1 Protein Homology CDS 1 1104 . - 0 ID=cds-TGC70683.1;Parent=gene-C9F09_30535;Dbxref=NCBI_GP:TGC70683.1;Name=TGC70683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=C9F09_30535;partial=true;product=peptide antibiotic transporter SbmA;protein_id=TGC70683.1;start_range=.,1;transl_table=11 PYKB01001743.1 Genbank gene 1202 1405 . + . ID=gene-C9F09_30540;Name=C9F09_30540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30540 PYKB01001743.1 Protein Homology CDS 1202 1405 . + 0 ID=cds-TGC70684.1;Parent=gene-C9F09_30540;Dbxref=NCBI_GP:TGC70684.1;Name=TGC70684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532899.1;locus_tag=C9F09_30540;product=hypothetical protein;protein_id=TGC70684.1;transl_table=11 PYKB01001743.1 Genbank gene 1451 2608 . + . ID=gene-C9F09_30545;Name=C9F09_30545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30545 PYKB01001743.1 Protein Homology CDS 1451 2608 . + 0 ID=cds-TGC70685.1;Parent=gene-C9F09_30545;Dbxref=NCBI_GP:TGC70685.1;Name=TGC70685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454970.1;locus_tag=C9F09_30545;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=TGC70685.1;transl_table=11 PYKB01001743.1 Genbank pseudogene 2653 2995 . - . ID=gene-C9F09_30550;Name=C9F09_30550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_30550;pseudo=true PYKB01001743.1 Protein Homology CDS 2653 2995 . - 1 ID=cds-C9F09_30550;Parent=gene-C9F09_30550;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454969.1;locus_tag=C9F09_30550;product=transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKB01001727.1 1 2984 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001727.1 Genbank region 1 2984 . + . ID=PYKB01001727.1:1..2984;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001727.1 Genbank gene 1 594 . - . ID=gene-C9F09_30275;Name=C9F09_30275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30275;partial=true;start_range=.,1 PYKB01001727.1 Protein Homology CDS 1 594 . - 0 ID=cds-TGC71239.1;Parent=gene-C9F09_30275;Dbxref=NCBI_GP:TGC71239.1;Name=TGC71239.1;Note=with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457324.1;locus_tag=C9F09_30275;partial=true;product=sulfate adenylyltransferase small subunit;protein_id=TGC71239.1;start_range=.,1;transl_table=11 PYKB01001727.1 Genbank gene 845 1891 . + . ID=gene-C9F09_30280;Name=C9F09_30280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30280 PYKB01001727.1 Protein Homology CDS 845 1891 . + 0 ID=cds-TGC71240.1;Parent=gene-C9F09_30280;Dbxref=NCBI_GP:TGC71240.1;Name=TGC71240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=C9F09_30280;product=aminopeptidase;protein_id=TGC71240.1;transl_table=11 PYKB01001727.1 Genbank direct_repeat 1906 2789 . + . ID=id-PYKB01001727.1:1906..2789;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2,COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1967..1995;rpt_unit_seq=cggtttatccccgctggcgcggggaacac PYKB01001727.1 Genbank gene 2874 2984 . - . ID=gene-C9F09_30285;Name=C9F09_30285;end_range=2984,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30285;partial=true PYKB01001727.1 Protein Homology CDS 2874 2984 . - 0 ID=cds-TGC71241.1;Parent=gene-C9F09_30285;Dbxref=NCBI_GP:TGC71241.1;Name=TGC71241.1;end_range=2984,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457326.1;locus_tag=C9F09_30285;partial=true;product=type I-E CRISPR-associated endoribonuclease Cas2;protein_id=TGC71241.1;transl_table=11 ##sequence-region PYKB01000584.1 1 2981 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000584.1 Genbank region 1 2981 . + . ID=PYKB01000584.1:1..2981;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000584.1 Genbank gene 1 2550 . - . ID=gene-C9F09_08400;Name=C9F09_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08400;partial=true;start_range=.,1 PYKB01000584.1 Protein Homology CDS 1 2550 . - 0 ID=cds-TGC95724.1;Parent=gene-C9F09_08400;Dbxref=NCBI_GP:TGC95724.1;Name=TGC95724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=C9F09_08400;partial=true;product=nitrate reductase subunit alpha;protein_id=TGC95724.1;start_range=.,1;transl_table=11 PYKB01000584.1 Genbank gene 2470 2655 . + . ID=gene-C9F09_08405;Name=C9F09_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08405 PYKB01000584.1 Protein Homology CDS 2470 2655 . + 0 ID=cds-TGC95723.1;Parent=gene-C9F09_08405;Dbxref=NCBI_GP:TGC95723.1;Name=TGC95723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344064.1;locus_tag=C9F09_08405;product=hypothetical protein;protein_id=TGC95723.1;transl_table=11 PYKB01000584.1 Genbank gene 2642 2981 . - . ID=gene-C9F09_08410;Name=C9F09_08410;end_range=2981,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08410;partial=true PYKB01000584.1 Protein Homology CDS 2642 2981 . - 1 ID=cds-TGC95725.1;Parent=gene-C9F09_08410;Dbxref=NCBI_GP:TGC95725.1;Name=TGC95725.1;Note=involved in the transport of nitrate and nitrite;end_range=2981,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455920.1;locus_tag=C9F09_08410;partial=true;product=nitrate/nitrite transporter;protein_id=TGC95725.1;transl_table=11 ##sequence-region PYKB01001091.1 1 2977 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001091.1 Genbank region 1 2977 . + . ID=PYKB01001091.1:1..2977;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001091.1 Genbank gene 1 737 . - . ID=gene-C9F09_18250;Name=C9F09_18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18250;partial=true;start_range=.,1 PYKB01001091.1 Protein Homology CDS 1 737 . - 0 ID=cds-TGC86238.1;Parent=gene-C9F09_18250;Dbxref=NCBI_GP:TGC86238.1;Name=TGC86238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=C9F09_18250;partial=true;product=hypothetical protein;protein_id=TGC86238.1;start_range=.,1;transl_table=11 PYKB01001091.1 Genbank pseudogene 1274 2638 . + . ID=gene-C9F09_18255;Name=C9F09_18255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18255;pseudo=true PYKB01001091.1 Protein Homology CDS 1274 2638 . + 0 ID=cds-C9F09_18255;Parent=gene-C9F09_18255;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455030.1;locus_tag=C9F09_18255;product=MFS transporter;pseudo=true;transl_table=11 PYKB01001091.1 Genbank gene 2685 2977 . - . ID=gene-C9F09_18260;Name=C9F09_18260;end_range=2977,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18260;partial=true PYKB01001091.1 Protein Homology CDS 2685 2977 . - 2 ID=cds-TGC86239.1;Parent=gene-C9F09_18260;Dbxref=NCBI_GP:TGC86239.1;Name=TGC86239.1;end_range=2977,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=C9F09_18260;partial=true;product=YajQ family cyclic di-GMP-binding protein;protein_id=TGC86239.1;transl_table=11 ##sequence-region PYKB01001047.1 1 2968 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001047.1 Genbank region 1 2968 . + . ID=PYKB01001047.1:1..2968;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001047.1 Genbank gene 1 794 . + . ID=gene-C9F09_17605;Name=C9F09_17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17605;partial=true;start_range=.,1 PYKB01001047.1 Protein Homology CDS 1 794 . + 2 ID=cds-TGC87167.1;Parent=gene-C9F09_17605;Dbxref=NCBI_GP:TGC87167.1;Name=TGC87167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=C9F09_17605;partial=true;product=glutamate synthase;protein_id=TGC87167.1;start_range=.,1;transl_table=11 PYKB01001047.1 Genbank pseudogene 804 2222 . + . ID=gene-C9F09_17610;Name=C9F09_17610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17610;pseudo=true PYKB01001047.1 Protein Homology CDS 804 2222 . + 0 ID=cds-C9F09_17610;Parent=gene-C9F09_17610;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=C9F09_17610;product=glutamate synthase small subunit;pseudo=true;transl_table=11 PYKB01001047.1 Genbank gene 2429 2968 . + . ID=gene-C9F09_17615;Name=C9F09_17615;end_range=2968,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17615;partial=true PYKB01001047.1 Protein Homology CDS 2429 2968 . + 0 ID=cds-TGC87168.1;Parent=gene-C9F09_17615;Dbxref=NCBI_GP:TGC87168.1;Name=TGC87168.1;end_range=2968,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457711.1;locus_tag=C9F09_17615;partial=true;product=DUF1016 domain-containing protein;protein_id=TGC87168.1;transl_table=11 ##sequence-region PYKB01000860.1 1 10489 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000860.1 Genbank region 1 10489 . + . ID=PYKB01000860.1:1..10489;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000860.1 Genbank gene 296 1795 . + . ID=gene-C9F09_13790;Name=C9F09_13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13790 PYKB01000860.1 Protein Homology CDS 296 1795 . + 0 ID=cds-TGC91022.1;Parent=gene-C9F09_13790;Dbxref=NCBI_GP:TGC91022.1;Name=TGC91022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=C9F09_13790;product=APC family permease;protein_id=TGC91022.1;transl_table=11 PYKB01000860.1 Genbank gene 1773 2330 . + . ID=gene-C9F09_13795;Name=C9F09_13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13795 PYKB01000860.1 Protein Homology CDS 1773 2330 . + 0 ID=cds-TGC91023.1;Parent=gene-C9F09_13795;Dbxref=NCBI_GP:TGC91023.1;Name=TGC91023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=C9F09_13795;product=DUF3156 domain-containing protein;protein_id=TGC91023.1;transl_table=11 PYKB01000860.1 Genbank gene 2435 3118 . - . ID=gene-C9F09_13800;Name=C9F09_13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13800 PYKB01000860.1 Protein Homology CDS 2435 3118 . - 0 ID=cds-TGC91024.1;Parent=gene-C9F09_13800;Dbxref=NCBI_GP:TGC91024.1;Name=TGC91024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457520.1;locus_tag=C9F09_13800;product=LuxR family transcriptional regulator;protein_id=TGC91024.1;transl_table=11 PYKB01000860.1 Genbank pseudogene 3644 3870 . + . ID=gene-C9F09_13805;Name=C9F09_13805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13805;pseudo=true PYKB01000860.1 Protein Homology CDS 3644 3870 . + 0 ID=cds-C9F09_13805;Parent=gene-C9F09_13805;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989239.1;locus_tag=C9F09_13805;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000860.1 Genbank gene 3895 4101 . - . ID=gene-C9F09_13810;Name=C9F09_13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13810 PYKB01000860.1 Protein Homology CDS 3895 4101 . - 0 ID=cds-TGC91025.1;Parent=gene-C9F09_13810;Dbxref=NCBI_GP:TGC91025.1;Name=TGC91025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441070.1;locus_tag=C9F09_13810;product=hypothetical protein;protein_id=TGC91025.1;transl_table=11 PYKB01000860.1 Genbank gene 4552 5202 . - . ID=gene-C9F09_13815;Name=C9F09_13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13815 PYKB01000860.1 Protein Homology CDS 4552 5202 . - 0 ID=cds-TGC91026.1;Parent=gene-C9F09_13815;Dbxref=NCBI_GP:TGC91026.1;Name=TGC91026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000724403.1;locus_tag=C9F09_13815;product=hypothetical protein;protein_id=TGC91026.1;transl_table=11 PYKB01000860.1 Genbank gene 5180 5710 . - . ID=gene-C9F09_13820;Name=C9F09_13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13820 PYKB01000860.1 Protein Homology CDS 5180 5710 . - 0 ID=cds-TGC91027.1;Parent=gene-C9F09_13820;Dbxref=NCBI_GP:TGC91027.1;Name=TGC91027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457515.1;locus_tag=C9F09_13820;product=DUF943 domain-containing protein;protein_id=TGC91027.1;transl_table=11 PYKB01000860.1 Genbank pseudogene 5907 6092 . - . ID=gene-C9F09_13825;Name=C9F09_13825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13825;pseudo=true PYKB01000860.1 Protein Homology CDS 5907 6092 . - 0 ID=cds-C9F09_13825;Parent=gene-C9F09_13825;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001729072.1;locus_tag=C9F09_13825;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000860.1 Genbank gene 6350 6853 . - . ID=gene-C9F09_13830;Name=C9F09_13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13830 PYKB01000860.1 Protein Homology CDS 6350 6853 . - 0 ID=cds-TGC91028.1;Parent=gene-C9F09_13830;Dbxref=NCBI_GP:TGC91028.1;Name=TGC91028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151807.1;locus_tag=C9F09_13830;product=hypothetical protein;protein_id=TGC91028.1;transl_table=11 PYKB01000860.1 Genbank gene 7242 7520 . - . ID=gene-C9F09_13835;Name=C9F09_13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13835 PYKB01000860.1 Protein Homology CDS 7242 7520 . - 0 ID=cds-TGC91029.1;Parent=gene-C9F09_13835;Dbxref=NCBI_GP:TGC91029.1;Name=TGC91029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457512.1;locus_tag=C9F09_13835;product=bacteriocin immunity protein;protein_id=TGC91029.1;transl_table=11 PYKB01000860.1 Genbank pseudogene 7535 7753 . - . ID=gene-C9F09_13840;Name=C9F09_13840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13840;pseudo=true PYKB01000860.1 Protein Homology CDS 7535 7753 . - 0 ID=cds-C9F09_13840;Parent=gene-C9F09_13840;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000093538.1;locus_tag=C9F09_13840;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000860.1 Genbank gene 7763 8029 . - . ID=gene-C9F09_13845;Name=C9F09_13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13845 PYKB01000860.1 Protein Homology CDS 7763 8029 . - 0 ID=cds-TGC91030.1;Parent=gene-C9F09_13845;Dbxref=NCBI_GP:TGC91030.1;Name=TGC91030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457511.1;locus_tag=C9F09_13845;product=colicin immunity protein;protein_id=TGC91030.1;transl_table=11 PYKB01000860.1 Genbank gene 8026 8343 . - . ID=gene-C9F09_13850;Name=C9F09_13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13850 PYKB01000860.1 Protein Homology CDS 8026 8343 . - 0 ID=cds-TGC91034.1;Parent=gene-C9F09_13850;Dbxref=NCBI_GP:TGC91034.1;Name=TGC91034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001141621.1;locus_tag=C9F09_13850;product=hypothetical protein;protein_id=TGC91034.1;transl_table=11 PYKB01000860.1 Genbank pseudogene 8413 8714 . - . ID=gene-C9F09_13855;Name=C9F09_13855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13855;pseudo=true PYKB01000860.1 Protein Homology CDS 8413 8714 . - 0 ID=cds-C9F09_13855;Parent=gene-C9F09_13855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989236.1;locus_tag=C9F09_13855;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000860.1 Genbank pseudogene 8699 8886 . - . ID=gene-C9F09_13860;Name=C9F09_13860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_13860;pseudo=true PYKB01000860.1 Protein Homology CDS 8699 8886 . - 0 ID=cds-C9F09_13860;Parent=gene-C9F09_13860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000628349.1;locus_tag=C9F09_13860;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000860.1 Genbank gene 9442 9642 . - . ID=gene-C9F09_13865;Name=C9F09_13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13865 PYKB01000860.1 Protein Homology CDS 9442 9642 . - 0 ID=cds-TGC91031.1;Parent=gene-C9F09_13865;Dbxref=NCBI_GP:TGC91031.1;Name=TGC91031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518649.1;locus_tag=C9F09_13865;product=type VI secretion system protein;protein_id=TGC91031.1;transl_table=11 PYKB01000860.1 Genbank gene 9676 9939 . + . ID=gene-C9F09_13870;Name=C9F09_13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13870 PYKB01000860.1 Protein Homology CDS 9676 9939 . + 0 ID=cds-TGC91032.1;Parent=gene-C9F09_13870;Dbxref=NCBI_GP:TGC91032.1;Name=TGC91032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000902029.1;locus_tag=C9F09_13870;product=hypothetical protein;protein_id=TGC91032.1;transl_table=11 PYKB01000860.1 Genbank gene 9992 10276 . - . ID=gene-C9F09_13875;Name=C9F09_13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13875 PYKB01000860.1 Protein Homology CDS 9992 10276 . - 0 ID=cds-TGC91033.1;Parent=gene-C9F09_13875;Dbxref=NCBI_GP:TGC91033.1;Name=TGC91033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727292.1;locus_tag=C9F09_13875;product=integrase;protein_id=TGC91033.1;transl_table=11 ##sequence-region PYKB01001576.1 1 2948 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001576.1 Genbank region 1 2948 . + . ID=PYKB01001576.1:1..2948;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001576.1 Genbank pseudogene 39 647 . + . ID=gene-C9F09_27515;Name=garD;gbkey=Gene;gene=garD;gene_biotype=pseudogene;locus_tag=C9F09_27515;pseudo=true PYKB01001576.1 Protein Homology CDS 39 647 . + 0 ID=cds-C9F09_27515;Parent=gene-C9F09_27515;Note=catalyzes the formation of 5-dehydro-4-deoxy-D-glucarate from D-galactarate%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=garD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457636.1;locus_tag=C9F09_27515;product=galactarate dehydratase;pseudo=true;transl_table=11 PYKB01001576.1 Genbank gene 887 1834 . - . ID=gene-C9F09_27520;Name=C9F09_27520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27520 PYKB01001576.1 Protein Homology CDS 887 1834 . - 0 ID=cds-TGC75418.1;Parent=gene-C9F09_27520;Dbxref=NCBI_GP:TGC75418.1;Name=TGC75418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462164.1;locus_tag=C9F09_27520;product=sugar kinase;protein_id=TGC75418.1;transl_table=11 PYKB01001576.1 Genbank gene 1845 2678 . - . ID=gene-C9F09_27525;Name=C9F09_27525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27525 PYKB01001576.1 Protein Homology CDS 1845 2678 . - 0 ID=cds-TGC75419.1;Parent=gene-C9F09_27525;Dbxref=NCBI_GP:TGC75419.1;Name=TGC75419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462165.1;locus_tag=C9F09_27525;product=DeoR/GlpR transcriptional regulator;protein_id=TGC75419.1;transl_table=11 ##sequence-region PYKB01001214.1 1 2967 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001214.1 Genbank region 1 2967 . + . ID=PYKB01001214.1:1..2967;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001214.1 Genbank pseudogene 1 135 . + . ID=gene-C9F09_20665;Name=C9F09_20665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_20665;pseudo=true PYKB01001214.1 Protein Homology CDS 1 135 . + 0 ID=cds-C9F09_20665;Parent=gene-C9F09_20665;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=C9F09_20665;product=type VI secretion system tube protein Hcp;pseudo=true;transl_table=11 PYKB01001214.1 Genbank gene 135 515 . + . ID=gene-C9F09_20670;Name=C9F09_20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20670 PYKB01001214.1 Protein Homology CDS 135 515 . + 0 ID=cds-TGC83083.1;Parent=gene-C9F09_20670;Dbxref=NCBI_GP:TGC83083.1;Name=TGC83083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=C9F09_20670;product=anti-adapter protein IraD;protein_id=TGC83083.1;transl_table=11 PYKB01001214.1 Genbank gene 651 2135 . - . ID=gene-C9F09_20675;Name=C9F09_20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20675 PYKB01001214.1 Protein Homology CDS 651 2135 . - 0 ID=cds-TGC83081.1;Parent=gene-C9F09_20675;Dbxref=NCBI_GP:TGC83081.1;Name=TGC83081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=C9F09_20675;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=TGC83081.1;transl_table=11 PYKB01001214.1 Genbank gene 2297 2967 . + . ID=gene-C9F09_20680;Name=C9F09_20680;end_range=2967,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20680;partial=true PYKB01001214.1 Protein Homology CDS 2297 2967 . + 0 ID=cds-TGC83082.1;Parent=gene-C9F09_20680;Dbxref=NCBI_GP:TGC83082.1;Name=TGC83082.1;end_range=2967,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457524.1;locus_tag=C9F09_20680;partial=true;product=FAD-dependent oxidoreductase;protein_id=TGC83082.1;transl_table=11 ##sequence-region PYKB01001433.1 1 2967 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001433.1 Genbank region 1 2967 . + . ID=PYKB01001433.1:1..2967;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001433.1 Genbank pseudogene 54 578 . - . ID=gene-C9F09_24635;Name=C9F09_24635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_24635;pseudo=true PYKB01001433.1 Protein Homology CDS 54 578 . - 0 ID=cds-C9F09_24635;Parent=gene-C9F09_24635;Note=catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456579.1;locus_tag=C9F09_24635;product=cobalamin biosynthesis protein CbiG;pseudo=true;transl_table=11 PYKB01001433.1 Genbank gene 559 1332 . - . ID=gene-C9F09_24640;Name=cbiF;gbkey=Gene;gene=cbiF;gene_biotype=protein_coding;locus_tag=C9F09_24640 PYKB01001433.1 Protein Homology CDS 559 1332 . - 0 ID=cds-TGC78718.1;Parent=gene-C9F09_24640;Dbxref=NCBI_GP:TGC78718.1;Name=TGC78718.1;Note=catalyzes the formation of cobalt-precorrin-5 from cobalt-precorrin-4;gbkey=CDS;gene=cbiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456580.1;locus_tag=C9F09_24640;product=cobalt-precorrin-4 C(11)-methyltransferase;protein_id=TGC78718.1;transl_table=11 PYKB01001433.1 Genbank gene 1316 1894 . - . ID=gene-C9F09_24645;Name=C9F09_24645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24645 PYKB01001433.1 Protein Homology CDS 1316 1894 . - 0 ID=cds-TGC78719.1;Parent=gene-C9F09_24645;Dbxref=NCBI_GP:TGC78719.1;Name=TGC78719.1;Note=catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W%3B decarboxylating;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=C9F09_24645;product=cobalt-precorrin-6Y C(15)-methyltransferase;protein_id=TGC78719.1;transl_table=11 PYKB01001433.1 Genbank gene 1884 2489 . - . ID=gene-C9F09_24650;Name=C9F09_24650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24650 PYKB01001433.1 Protein Homology CDS 1884 2489 . - 0 ID=cds-TGC78720.1;Parent=gene-C9F09_24650;Dbxref=NCBI_GP:TGC78720.1;Name=TGC78720.1;Note=catalyzes the methylation of C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W-a;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456582.1;locus_tag=C9F09_24650;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=TGC78720.1;transl_table=11 PYKB01001433.1 Genbank gene 2483 2967 . - . ID=gene-C9F09_24655;Name=cbiD;end_range=2967,.;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=C9F09_24655;partial=true PYKB01001433.1 Protein Homology CDS 2483 2967 . - 2 ID=cds-TGC78721.1;Parent=gene-C9F09_24655;Dbxref=NCBI_GP:TGC78721.1;Name=TGC78721.1;Note=Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A;end_range=2967,.;gbkey=CDS;gene=cbiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456583.1;locus_tag=C9F09_24655;partial=true;product=cobalt-precorrin-5B (C(1))-methyltransferase;protein_id=TGC78721.1;transl_table=11 ##sequence-region PYKB01001481.1 1 2967 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001481.1 Genbank region 1 2967 . + . ID=PYKB01001481.1:1..2967;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001481.1 Genbank gene 30 911 . - . ID=gene-C9F09_25730;Name=C9F09_25730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25730 PYKB01001481.1 Protein Homology CDS 30 911 . - 0 ID=cds-TGC77628.1;Parent=gene-C9F09_25730;Dbxref=NCBI_GP:TGC77628.1;Name=TGC77628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001707503.1;locus_tag=C9F09_25730;product=histidine kinase;protein_id=TGC77628.1;transl_table=11 PYKB01001481.1 Genbank gene 908 1492 . - . ID=gene-C9F09_25735;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=C9F09_25735 PYKB01001481.1 Protein Homology CDS 908 1492 . - 0 ID=cds-TGC77630.1;Parent=gene-C9F09_25735;Dbxref=NCBI_GP:TGC77630.1;Name=TGC77630.1;gbkey=CDS;gene=kdpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=C9F09_25735;product=potassium-transporting ATPase subunit C;protein_id=TGC77630.1;transl_table=11 PYKB01001481.1 Genbank gene 1501 2967 . - . ID=gene-C9F09_25740;Name=kdpB;end_range=2967,.;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=C9F09_25740;partial=true PYKB01001481.1 Protein Homology CDS 1501 2967 . - 0 ID=cds-TGC77629.1;Parent=gene-C9F09_25740;Dbxref=NCBI_GP:TGC77629.1;Name=TGC77629.1;end_range=2967,.;gbkey=CDS;gene=kdpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=C9F09_25740;partial=true;product=K(+)-transporting ATPase subunit B;protein_id=TGC77629.1;transl_table=11 ##sequence-region PYKB01001517.1 1 2960 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001517.1 Genbank region 1 2960 . + . ID=PYKB01001517.1:1..2960;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001517.1 Genbank gene 1 834 . - . ID=gene-C9F09_26305;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=C9F09_26305;partial=true;start_range=.,1 PYKB01001517.1 Protein Homology CDS 1 834 . - 0 ID=cds-TGC76838.1;Parent=gene-C9F09_26305;Dbxref=NCBI_GP:TGC76838.1;Name=TGC76838.1;gbkey=CDS;gene=hemA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456287.1;locus_tag=C9F09_26305;partial=true;product=glutamyl-tRNA reductase;protein_id=TGC76838.1;start_range=.,1;transl_table=11 PYKB01001517.1 Genbank gene 1148 1771 . + . ID=gene-C9F09_26310;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=C9F09_26310 PYKB01001517.1 Protein Homology CDS 1148 1771 . + 0 ID=cds-TGC76839.1;Parent=gene-C9F09_26310;Dbxref=NCBI_GP:TGC76839.1;Name=TGC76839.1;Note=Incorporates lipoproteins in the outer membrane after they are released by the LolA protein;gbkey=CDS;gene=lolB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=C9F09_26310;product=outer membrane lipoprotein LolB;protein_id=TGC76839.1;transl_table=11 PYKB01001517.1 Genbank gene 1768 2619 . + . ID=gene-C9F09_26315;Name=C9F09_26315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26315 PYKB01001517.1 Protein Homology CDS 1768 2619 . + 0 ID=cds-TGC76840.1;Parent=gene-C9F09_26315;Dbxref=NCBI_GP:TGC76840.1;Name=TGC76840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=C9F09_26315;product=4-diphosphocytidyl-2C-methyl-D-erythritol kinase;protein_id=TGC76840.1;transl_table=11 ##sequence-region PYKB01000883.1 1 2956 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000883.1 Genbank region 1 2956 . + . ID=PYKB01000883.1:1..2956;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000883.1 Genbank gene 1 231 . - . ID=gene-C9F09_14385;Name=C9F09_14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14385;partial=true;start_range=.,1 PYKB01000883.1 Protein Homology CDS 1 231 . - 0 ID=cds-TGC90551.1;Parent=gene-C9F09_14385;Dbxref=NCBI_GP:TGC90551.1;Name=TGC90551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=C9F09_14385;partial=true;product=tricarboxylic transporter;protein_id=TGC90551.1;start_range=.,1;transl_table=11 PYKB01000883.1 Genbank gene 386 1060 . + . ID=gene-C9F09_14390;Name=C9F09_14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14390 PYKB01000883.1 Protein Homology CDS 386 1060 . + 0 ID=cds-TGC90552.1;Parent=gene-C9F09_14390;Dbxref=NCBI_GP:TGC90552.1;Name=TGC90552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=C9F09_14390;product=DNA-binding response regulator;protein_id=TGC90552.1;transl_table=11 PYKB01000883.1 Genbank gene 1047 2462 . + . ID=gene-C9F09_14395;Name=C9F09_14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14395 PYKB01000883.1 Protein Homology CDS 1047 2462 . + 0 ID=cds-TGC90553.1;Parent=gene-C9F09_14395;Dbxref=NCBI_GP:TGC90553.1;Name=TGC90553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=C9F09_14395;product=histidine kinase;protein_id=TGC90553.1;transl_table=11 PYKB01000883.1 Genbank gene 2595 2956 . + . ID=gene-C9F09_14400;Name=C9F09_14400;end_range=2956,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14400;partial=true PYKB01000883.1 Protein Homology CDS 2595 2956 . + 0 ID=cds-TGC90554.1;Parent=gene-C9F09_14400;Dbxref=NCBI_GP:TGC90554.1;Name=TGC90554.1;end_range=2956,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=C9F09_14400;partial=true;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=TGC90554.1;transl_table=11 ##sequence-region PYKB01001163.1 1 2955 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001163.1 Genbank region 1 2955 . + . ID=PYKB01001163.1:1..2955;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001163.1 Genbank gene 1 318 . + . ID=gene-C9F09_19640;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=C9F09_19640;partial=true;start_range=.,1 PYKB01001163.1 Protein Homology CDS 1 318 . + 0 ID=cds-TGC84483.1;Parent=gene-C9F09_19640;Dbxref=NCBI_GP:TGC84483.1;Name=TGC84483.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;gbkey=CDS;gene=frr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=C9F09_19640;partial=true;product=ribosome-recycling factor;protein_id=TGC84483.1;start_range=.,1;transl_table=11 PYKB01001163.1 Genbank gene 459 1655 . + . ID=gene-C9F09_19645;Name=C9F09_19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19645 PYKB01001163.1 Protein Homology CDS 459 1655 . + 0 ID=cds-TGC84484.1;Parent=gene-C9F09_19645;Dbxref=NCBI_GP:TGC84484.1;Name=TGC84484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454827.1;locus_tag=C9F09_19645;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=TGC84484.1;transl_table=11 PYKB01001163.1 Genbank gene 1738 1941 . + . ID=gene-C9F09_19650;Name=C9F09_19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19650 PYKB01001163.1 Protein Homology CDS 1738 1941 . + 0 ID=cds-TGC84485.1;Parent=gene-C9F09_19650;Dbxref=NCBI_GP:TGC84485.1;Name=TGC84485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014343956.1;locus_tag=C9F09_19650;product=hypothetical protein;protein_id=TGC84485.1;transl_table=11 PYKB01001163.1 Genbank gene 1968 2726 . + . ID=gene-C9F09_19655;Name=C9F09_19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19655 PYKB01001163.1 Protein Homology CDS 1968 2726 . + 0 ID=cds-TGC84486.1;Parent=gene-C9F09_19655;Dbxref=NCBI_GP:TGC84486.1;Name=TGC84486.1;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=C9F09_19655;product=ditrans%2Cpolycis-undecaprenyl-diphosphate synthase ((2E%2C6E)-farnesyl-diphosphate specific);protein_id=TGC84486.1;transl_table=11 PYKB01001163.1 Genbank gene 2739 2955 . + . ID=gene-C9F09_19660;Name=cdsA;end_range=2955,.;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=C9F09_19660;partial=true PYKB01001163.1 Protein Homology CDS 2739 2955 . + 0 ID=cds-TGC84487.1;Parent=gene-C9F09_19660;Dbxref=NCBI_GP:TGC84487.1;Name=TGC84487.1;Note=catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate;end_range=2955,.;gbkey=CDS;gene=cdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454829.1;locus_tag=C9F09_19660;partial=true;product=CDP-diglyceride synthetase;protein_id=TGC84487.1;transl_table=11 ##sequence-region PYKB01001153.1 1 2954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001153.1 Genbank region 1 2954 . + . ID=PYKB01001153.1:1..2954;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001153.1 Genbank pseudogene 96 419 . + . ID=gene-C9F09_19475;Name=C9F09_19475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_19475;pseudo=true PYKB01001153.1 Protein Homology CDS 96 419 . + 0 ID=cds-C9F09_19475;Parent=gene-C9F09_19475;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454879.1;locus_tag=C9F09_19475;product=type VI secretion system contractile sheath small subunit;pseudo=true;transl_table=11 PYKB01001153.1 Genbank gene 443 1951 . + . ID=gene-C9F09_19480;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=C9F09_19480 PYKB01001153.1 Protein Homology CDS 443 1951 . + 0 ID=cds-TGC84666.1;Parent=gene-C9F09_19480;Dbxref=NCBI_GP:TGC84666.1;Name=TGC84666.1;gbkey=CDS;gene=tssC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=C9F09_19480;product=type VI secretion system contractile sheath large subunit;protein_id=TGC84666.1;transl_table=11 PYKB01001153.1 Genbank pseudogene 2016 2123 . + . ID=gene-C9F09_19485;Name=C9F09_19485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_19485;pseudo=true PYKB01001153.1 Protein Homology CDS 2016 2123 . + 0 ID=cds-C9F09_19485;Parent=gene-C9F09_19485;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459272.1;locus_tag=C9F09_19485;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001153.1 Genbank gene 2253 2585 . + . ID=gene-C9F09_19490;Name=C9F09_19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19490 PYKB01001153.1 Protein Homology CDS 2253 2585 . + 0 ID=cds-TGC84668.1;Parent=gene-C9F09_19490;Dbxref=NCBI_GP:TGC84668.1;Name=TGC84668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459273.3;locus_tag=C9F09_19490;product=hypothetical protein;protein_id=TGC84668.1;transl_table=11 PYKB01001153.1 Genbank gene 2839 2954 . + . ID=gene-C9F09_19495;Name=C9F09_19495;end_range=2954,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19495;partial=true PYKB01001153.1 Protein Homology CDS 2839 2954 . + 0 ID=cds-TGC84667.1;Parent=gene-C9F09_19495;Dbxref=NCBI_GP:TGC84667.1;Name=TGC84667.1;end_range=2954,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454882.1;locus_tag=C9F09_19495;partial=true;product=type VI secretion system tube protein Hcp;protein_id=TGC84667.1;transl_table=11 ##sequence-region PYKB01000409.1 1 2951 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000409.1 Genbank region 1 2951 . + . ID=PYKB01000409.1:1..2951;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000409.1 Genbank gene 6 626 . - . ID=gene-C9F09_04670;Name=C9F09_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04670 PYKB01000409.1 Protein Homology CDS 6 626 . - 0 ID=cds-TGC99455.1;Parent=gene-C9F09_04670;Dbxref=NCBI_GP:TGC99455.1;Name=TGC99455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001786170.1;locus_tag=C9F09_04670;product=GntR family transcriptional regulator;protein_id=TGC99455.1;transl_table=11 PYKB01000409.1 Genbank gene 689 1729 . - . ID=gene-C9F09_04675;Name=C9F09_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04675 PYKB01000409.1 Protein Homology CDS 689 1729 . - 0 ID=cds-TGC99453.1;Parent=gene-C9F09_04675;Dbxref=NCBI_GP:TGC99453.1;Name=TGC99453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457983.1;locus_tag=C9F09_04675;product=ADP-ribosylglycohydrolase family protein;protein_id=TGC99453.1;transl_table=11 PYKB01000409.1 Genbank gene 1739 2698 . - . ID=gene-C9F09_04680;Name=C9F09_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04680 PYKB01000409.1 Protein Homology CDS 1739 2698 . - 0 ID=cds-TGC99454.1;Parent=gene-C9F09_04680;Dbxref=NCBI_GP:TGC99454.1;Name=TGC99454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=C9F09_04680;product=aminoimidazole riboside kinase;protein_id=TGC99454.1;transl_table=11 PYKB01000409.1 Genbank pseudogene 2709 2870 . - . ID=gene-C9F09_04685;Name=C9F09_04685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04685;pseudo=true PYKB01000409.1 Protein Homology CDS 2709 2870 . - 0 ID=cds-C9F09_04685;Parent=gene-C9F09_04685;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=C9F09_04685;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKB01001150.1 1 2946 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001150.1 Genbank region 1 2946 . + . ID=PYKB01001150.1:1..2946;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001150.1 Genbank gene 1 992 . - . ID=gene-C9F09_19420;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;gene_synonym=ipgD,sigD;locus_tag=C9F09_19420;partial=true;start_range=.,1 PYKB01001150.1 Protein Homology CDS 1 992 . - 0 ID=cds-TGC84714.1;Parent=gene-C9F09_19420;Dbxref=NCBI_GP:TGC84714.1;Name=TGC84714.1;Note=pathogenicity island 1 protein%3B catalyzes the formation of phosphatidylinositol-3 phosphate from phosphatidylinositol-3%2C4%2C5-triphosphate%3B involved in the formation and maintenance of Salmonella-containing vacuole in the host cell;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455588.1;locus_tag=C9F09_19420;partial=true;product=inositol phosphatase;protein_id=TGC84714.1;start_range=.,1;transl_table=11 PYKB01001150.1 Genbank gene 1326 1496 . + . ID=gene-C9F09_19425;Name=C9F09_19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19425 PYKB01001150.1 Protein Homology CDS 1326 1496 . + 0 ID=cds-TGC84715.1;Parent=gene-C9F09_19425;Dbxref=NCBI_GP:TGC84715.1;Name=TGC84715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455589.1;locus_tag=C9F09_19425;product=DUF3950 domain-containing protein;protein_id=TGC84715.1;transl_table=11 PYKB01001150.1 Genbank gene 1497 1607 . - . ID=gene-C9F09_19430;Name=C9F09_19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19430 PYKB01001150.1 Protein Homology CDS 1497 1607 . - 0 ID=cds-TGC84716.1;Parent=gene-C9F09_19430;Dbxref=NCBI_GP:TGC84716.1;Name=TGC84716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=C9F09_19430;product=hypothetical protein;protein_id=TGC84716.1;transl_table=11 PYKB01001150.1 Genbank gene 1716 2946 . - . ID=gene-C9F09_19435;Name=C9F09_19435;end_range=2946,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19435;partial=true PYKB01001150.1 Protein Homology CDS 1716 2946 . - 1 ID=cds-TGC84717.1;Parent=gene-C9F09_19435;Dbxref=NCBI_GP:TGC84717.1;Name=TGC84717.1;end_range=2946,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=C9F09_19435;partial=true;product=dipeptidase;protein_id=TGC84717.1;transl_table=11 ##sequence-region PYKB01000861.1 1 10422 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000861.1 Genbank region 1 10422 . + . ID=PYKB01000861.1:1..10422;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000861.1 Genbank gene 1 240 . - . ID=gene-C9F09_13880;Name=C9F09_13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13880;partial=true;start_range=.,1 PYKB01000861.1 Protein Homology CDS 1 240 . - 0 ID=cds-TGC90970.1;Parent=gene-C9F09_13880;Dbxref=NCBI_GP:TGC90970.1;Name=TGC90970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456496.1;locus_tag=C9F09_13880;partial=true;product=DJ-1 family protein;protein_id=TGC90970.1;start_range=.,1;transl_table=11 PYKB01000861.1 Genbank gene 791 1294 . + . ID=gene-C9F09_13885;Name=C9F09_13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13885 PYKB01000861.1 Protein Homology CDS 791 1294 . + 0 ID=cds-TGC90971.1;Parent=gene-C9F09_13885;Dbxref=NCBI_GP:TGC90971.1;Name=TGC90971.1;Note=ferritin B%3B required for virulence in Salmonella%3B may be involved in repair of damaged Fe-S clusters;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456497.1;locus_tag=C9F09_13885;product=ferritin;protein_id=TGC90971.1;transl_table=11 PYKB01000861.1 Genbank gene 1473 2111 . - . ID=gene-C9F09_13890;Name=C9F09_13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13890 PYKB01000861.1 Protein Homology CDS 1473 2111 . - 0 ID=cds-TGC90972.1;Parent=gene-C9F09_13890;Dbxref=NCBI_GP:TGC90972.1;Name=TGC90972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=C9F09_13890;product=hypothetical protein;protein_id=TGC90972.1;transl_table=11 PYKB01000861.1 Genbank gene 2367 2702 . + . ID=gene-C9F09_13895;Name=C9F09_13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13895 PYKB01000861.1 Protein Homology CDS 2367 2702 . + 0 ID=cds-TGC90973.1;Parent=gene-C9F09_13895;Dbxref=NCBI_GP:TGC90973.1;Name=TGC90973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=C9F09_13895;product=hypothetical protein;protein_id=TGC90973.1;transl_table=11 PYKB01000861.1 Genbank gene 2942 3439 . + . ID=gene-C9F09_13900;Name=C9F09_13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13900 PYKB01000861.1 Protein Homology CDS 2942 3439 . + 0 ID=cds-TGC90974.1;Parent=gene-C9F09_13900;Dbxref=NCBI_GP:TGC90974.1;Name=TGC90974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=C9F09_13900;product=non-heme ferritin;protein_id=TGC90974.1;transl_table=11 PYKB01000861.1 Genbank gene 3485 3724 . - . ID=gene-C9F09_13905;Name=C9F09_13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13905 PYKB01000861.1 Protein Homology CDS 3485 3724 . - 0 ID=cds-TGC90975.1;Parent=gene-C9F09_13905;Dbxref=NCBI_GP:TGC90975.1;Name=TGC90975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456500.1;locus_tag=C9F09_13905;product=DUF2492 domain-containing protein;protein_id=TGC90975.1;transl_table=11 PYKB01000861.1 Genbank gene 3951 5162 . + . ID=gene-C9F09_13910;Name=C9F09_13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13910 PYKB01000861.1 Protein Homology CDS 3951 5162 . + 0 ID=cds-TGC90982.1;Parent=gene-C9F09_13910;Dbxref=NCBI_GP:TGC90982.1;Name=TGC90982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456501.1;locus_tag=C9F09_13910;product=tyrosine transporter TyrP;protein_id=TGC90982.1;transl_table=11 PYKB01000861.1 Genbank gene 5237 5902 . - . ID=gene-C9F09_13915;Name=C9F09_13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13915 PYKB01000861.1 Protein Homology CDS 5237 5902 . - 0 ID=cds-TGC90976.1;Parent=gene-C9F09_13915;Dbxref=NCBI_GP:TGC90976.1;Name=TGC90976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456502.1;locus_tag=C9F09_13915;product=YecA family protein;protein_id=TGC90976.1;transl_table=11 PYKB01000861.1 Genbank gene 6141 6467 . - . ID=gene-C9F09_13920;Name=C9F09_13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13920 PYKB01000861.1 Protein Homology CDS 6141 6467 . - 0 ID=cds-TGC90977.1;Parent=gene-C9F09_13920;Dbxref=NCBI_GP:TGC90977.1;Name=TGC90977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=C9F09_13920;product=glucose-6-phosphate dehydrogenase;protein_id=TGC90977.1;transl_table=11 PYKB01000861.1 Genbank gene 6680 8119 . - . ID=gene-C9F09_13925;Name=C9F09_13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13925 PYKB01000861.1 Protein Homology CDS 6680 8119 . - 0 ID=cds-TGC90978.1;Parent=gene-C9F09_13925;Dbxref=NCBI_GP:TGC90978.1;Name=TGC90978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=C9F09_13925;product=cell wall hydrolase;protein_id=TGC90978.1;transl_table=11 PYKB01000861.1 Genbank gene 8333 8665 . - . ID=gene-C9F09_13930;Name=C9F09_13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13930 PYKB01000861.1 Protein Homology CDS 8333 8665 . - 0 ID=cds-TGC90979.1;Parent=gene-C9F09_13930;Dbxref=NCBI_GP:TGC90979.1;Name=TGC90979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=C9F09_13930;product=hypothetical protein;protein_id=TGC90979.1;transl_table=11 PYKB01000861.1 Genbank gene 8916 9002 . - . ID=gene-C9F09_13935;Name=C9F09_13935;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_13935 PYKB01000861.1 tRNAscan-SE tRNA 8916 9002 . - . ID=rna-C9F09_13935;Parent=gene-C9F09_13935;anticodon=(pos:complement(8966..8968));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_13935;product=tRNA-Leu PYKB01000861.1 tRNAscan-SE exon 8916 9002 . - . ID=exon-C9F09_13935-1;Parent=rna-C9F09_13935;anticodon=(pos:complement(8966..8968));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_13935;product=tRNA-Leu PYKB01000861.1 Genbank gene 9014 9087 . - . ID=gene-C9F09_13940;Name=C9F09_13940;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_13940 PYKB01000861.1 tRNAscan-SE tRNA 9014 9087 . - . ID=rna-C9F09_13940;Parent=gene-C9F09_13940;anticodon=(pos:complement(9053..9055));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_13940;product=tRNA-Cys PYKB01000861.1 tRNAscan-SE exon 9014 9087 . - . ID=exon-C9F09_13940-1;Parent=rna-C9F09_13940;anticodon=(pos:complement(9053..9055));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_13940;product=tRNA-Cys PYKB01000861.1 Genbank gene 9139 9214 . - . ID=gene-C9F09_13945;Name=C9F09_13945;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_13945 PYKB01000861.1 tRNAscan-SE tRNA 9139 9214 . - . ID=rna-C9F09_13945;Parent=gene-C9F09_13945;anticodon=(pos:complement(9179..9181));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_13945;product=tRNA-Gly PYKB01000861.1 tRNAscan-SE exon 9139 9214 . - . ID=exon-C9F09_13945-1;Parent=rna-C9F09_13945;anticodon=(pos:complement(9179..9181));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_13945;product=tRNA-Gly PYKB01000861.1 Genbank gene 9366 9914 . - . ID=gene-C9F09_13950;Name=C9F09_13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13950 PYKB01000861.1 Protein Homology CDS 9366 9914 . - 0 ID=cds-TGC90980.1;Parent=gene-C9F09_13950;Dbxref=NCBI_GP:TGC90980.1;Name=TGC90980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456508.1;locus_tag=C9F09_13950;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=TGC90980.1;transl_table=11 PYKB01000861.1 Genbank gene 9971 10422 . - . ID=gene-C9F09_13955;Name=uvrC;end_range=10422,.;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=C9F09_13955;partial=true PYKB01000861.1 Protein Homology CDS 9971 10422 . - 2 ID=cds-TGC90981.1;Parent=gene-C9F09_13955;Dbxref=NCBI_GP:TGC90981.1;Name=TGC90981.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;end_range=10422,.;gbkey=CDS;gene=uvrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456509.1;locus_tag=C9F09_13955;partial=true;product=excinuclease ABC subunit C;protein_id=TGC90981.1;transl_table=11 ##sequence-region PYKB01000975.1 1 2944 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000975.1 Genbank region 1 2944 . + . ID=PYKB01000975.1:1..2944;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000975.1 Genbank gene 1 215 . + . ID=gene-C9F09_16145;Name=C9F09_16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16145;partial=true;start_range=.,1 PYKB01000975.1 Protein Homology CDS 1 215 . + 2 ID=cds-TGC88765.1;Parent=gene-C9F09_16145;Dbxref=NCBI_GP:TGC88765.1;Name=TGC88765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455414.1;locus_tag=C9F09_16145;partial=true;product=arginine ABC transporter substrate-binding protein;protein_id=TGC88765.1;start_range=.,1;transl_table=11 PYKB01000975.1 Genbank gene 237 437 . + . ID=gene-C9F09_16150;Name=C9F09_16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16150 PYKB01000975.1 Protein Homology CDS 237 437 . + 0 ID=cds-TGC88766.1;Parent=gene-C9F09_16150;Dbxref=NCBI_GP:TGC88766.1;Name=TGC88766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533186.1;locus_tag=C9F09_16150;product=hypothetical protein;protein_id=TGC88766.1;transl_table=11 PYKB01000975.1 Genbank gene 434 1921 . - . ID=gene-C9F09_16155;Name=C9F09_16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16155 PYKB01000975.1 Protein Homology CDS 434 1921 . - 0 ID=cds-TGC88767.1;Parent=gene-C9F09_16155;Dbxref=NCBI_GP:TGC88767.1;Name=TGC88767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455413.1;locus_tag=C9F09_16155;product=sulfatase;protein_id=TGC88767.1;transl_table=11 PYKB01000975.1 Genbank gene 1931 2251 . - . ID=gene-C9F09_16160;Name=C9F09_16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16160 PYKB01000975.1 Protein Homology CDS 1931 2251 . - 0 ID=cds-TGC88768.1;Parent=gene-C9F09_16160;Dbxref=NCBI_GP:TGC88768.1;Name=TGC88768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=C9F09_16160;product=PTS sugar transporter IIB;protein_id=TGC88768.1;transl_table=11 PYKB01000975.1 Genbank pseudogene 2281 2883 . - . ID=gene-C9F09_16165;Name=C9F09_16165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16165;pseudo=true PYKB01000975.1 Protein Homology CDS 2281 2883 . - 0 ID=cds-C9F09_16165;Parent=gene-C9F09_16165;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=C9F09_16165;product=PTS ascorbate transporter subunit IIC;pseudo=true;transl_table=11 ##sequence-region PYKB01000730.1 1 2938 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000730.1 Genbank region 1 2938 . + . ID=PYKB01000730.1:1..2938;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000730.1 Genbank pseudogene 48 431 . + . ID=gene-C9F09_11145;Name=C9F09_11145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11145;pseudo=true PYKB01000730.1 Protein Homology CDS 48 431 . + 0 ID=cds-C9F09_11145;Parent=gene-C9F09_11145;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462432.1;locus_tag=C9F09_11145;product=dihydroxy-acid dehydratase;pseudo=true;transl_table=11 PYKB01000730.1 Genbank gene 475 1380 . + . ID=gene-C9F09_11150;Name=C9F09_11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11150 PYKB01000730.1 Protein Homology CDS 475 1380 . + 0 ID=cds-TGC93303.1;Parent=gene-C9F09_11150;Dbxref=NCBI_GP:TGC93303.1;Name=TGC93303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462433.1;locus_tag=C9F09_11150;product=dihydrodipicolinate synthase family protein;protein_id=TGC93303.1;transl_table=11 PYKB01000730.1 Genbank gene 1424 2179 . - . ID=gene-C9F09_11155;Name=C9F09_11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11155 PYKB01000730.1 Protein Homology CDS 1424 2179 . - 0 ID=cds-TGC93304.1;Parent=gene-C9F09_11155;Dbxref=NCBI_GP:TGC93304.1;Name=TGC93304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462434.1;locus_tag=C9F09_11155;product=IclR family transcriptional regulator;protein_id=TGC93304.1;transl_table=11 PYKB01000730.1 Genbank gene 2357 2938 . - . ID=gene-C9F09_11160;Name=C9F09_11160;end_range=2938,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11160;partial=true PYKB01000730.1 Protein Homology CDS 2357 2938 . - 0 ID=cds-TGC93305.1;Parent=gene-C9F09_11160;Dbxref=NCBI_GP:TGC93305.1;Name=TGC93305.1;end_range=2938,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458384.1;locus_tag=C9F09_11160;partial=true;product=glycogen phosphorylase;protein_id=TGC93305.1;transl_table=11 ##sequence-region PYKB01000186.1 1 2936 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000186.1 Genbank region 1 2936 . + . ID=PYKB01000186.1:1..2936;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000186.1 Genbank pseudogene 1 588 . + . ID=gene-C9F09_02065;Name=C9F09_02065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02065;pseudo=true PYKB01000186.1 Protein Homology CDS 1 588 . + 0 ID=cds-C9F09_02065;Parent=gene-C9F09_02065;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455376.1;locus_tag=C9F09_02065;product=sugar-phosphatase;pseudo=true;transl_table=11 PYKB01000186.1 Genbank gene 666 2936 . - . ID=gene-C9F09_02070;Name=C9F09_02070;end_range=2936,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02070;partial=true PYKB01000186.1 Protein Homology CDS 666 2936 . - 0 ID=cds-TGD03822.1;Parent=gene-C9F09_02070;Dbxref=NCBI_GP:TGD03822.1;Name=TGD03822.1;end_range=2936,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455377.1;locus_tag=C9F09_02070;partial=true;product=formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme;protein_id=TGD03822.1;transl_table=11 ##sequence-region PYKB01000171.1 1 2895 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000171.1 Genbank region 1 2895 . + . ID=PYKB01000171.1:1..2895;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000171.1 Genbank gene 1 2334 . + . ID=gene-C9F09_01915;Name=C9F09_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01915;partial=true;start_range=.,1 PYKB01000171.1 Protein Homology CDS 1 2334 . + 0 ID=cds-TGD04008.1;Parent=gene-C9F09_01915;Dbxref=NCBI_GP:TGD04008.1;Name=TGD04008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455902.1;locus_tag=C9F09_01915;partial=true;product=hypothetical protein;protein_id=TGD04008.1;start_range=.,1;transl_table=11 PYKB01000171.1 Genbank gene 2346 2895 . + . ID=gene-C9F09_01920;Name=C9F09_01920;end_range=2895,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01920;partial=true PYKB01000171.1 Protein Homology CDS 2346 2895 . + 0 ID=cds-TGD04009.1;Parent=gene-C9F09_01920;Dbxref=NCBI_GP:TGD04009.1;Name=TGD04009.1;end_range=2895,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456993.1;locus_tag=C9F09_01920;partial=true;product=ethanolamine ammonia-lyase;protein_id=TGD04009.1;transl_table=11 ##sequence-region PYKB01001458.1 1 2923 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001458.1 Genbank region 1 2923 . + . ID=PYKB01001458.1:1..2923;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001458.1 Genbank pseudogene 1 226 . + . ID=gene-C9F09_25325;Name=C9F09_25325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_25325;pseudo=true PYKB01001458.1 Protein Homology CDS 1 226 . + 1 ID=cds-C9F09_25325;Parent=gene-C9F09_25325;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457110.1;locus_tag=C9F09_25325;product=ribonuclease III;pseudo=true;transl_table=11 PYKB01001458.1 Genbank gene 223 1128 . + . ID=gene-C9F09_25330;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=C9F09_25330 PYKB01001458.1 Protein Homology CDS 223 1128 . + 0 ID=cds-TGC78070.1;Parent=gene-C9F09_25330;Dbxref=NCBI_GP:TGC78070.1;Name=TGC78070.1;gbkey=CDS;gene=era;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457109.1;locus_tag=C9F09_25330;product=GTPase Era;protein_id=TGC78070.1;transl_table=11 PYKB01001458.1 Genbank gene 1140 1868 . + . ID=gene-C9F09_25335;Name=C9F09_25335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25335 PYKB01001458.1 Protein Homology CDS 1140 1868 . + 0 ID=cds-TGC78071.1;Parent=gene-C9F09_25335;Dbxref=NCBI_GP:TGC78071.1;Name=TGC78071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457108.1;locus_tag=C9F09_25335;product=DNA repair protein RecO;protein_id=TGC78071.1;transl_table=11 PYKB01001458.1 Genbank gene 1880 2611 . + . ID=gene-C9F09_25340;Name=C9F09_25340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25340 PYKB01001458.1 Protein Homology CDS 1880 2611 . + 0 ID=cds-TGC78072.1;Parent=gene-C9F09_25340;Dbxref=NCBI_GP:TGC78072.1;Name=TGC78072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457107.1;locus_tag=C9F09_25340;product=pyridoxine 5'-phosphate synthase;protein_id=TGC78072.1;transl_table=11 PYKB01001458.1 Genbank pseudogene 2611 2865 . + . ID=gene-C9F09_25345;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=pseudogene;locus_tag=C9F09_25345;pseudo=true PYKB01001458.1 Protein Homology CDS 2611 2865 . + 0 ID=cds-C9F09_25345;Parent=gene-C9F09_25345;Note=Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=acpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457106.1;locus_tag=C9F09_25345;product=holo-ACP synthase;pseudo=true;transl_table=11 ##sequence-region PYKB01001403.1 1 2923 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001403.1 Genbank region 1 2923 . + . ID=PYKB01001403.1:1..2923;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001403.1 Genbank gene 1 2142 . - . ID=gene-C9F09_24110;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=C9F09_24110;partial=true;start_range=.,1 PYKB01001403.1 Protein Homology CDS 1 2142 . - 0 ID=cds-TGC79400.1;Parent=gene-C9F09_24110;Dbxref=NCBI_GP:TGC79400.1;Name=TGC79400.1;gbkey=CDS;gene=speF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=C9F09_24110;partial=true;product=ornithine decarboxylase SpeF;protein_id=TGC79400.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001336.1 1 2922 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001336.1 Genbank region 1 2922 . + . ID=PYKB01001336.1:1..2922;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001336.1 Genbank gene 1 698 . + . ID=gene-C9F09_22960;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=C9F09_22960;partial=true;start_range=.,1 PYKB01001336.1 Protein Homology CDS 1 698 . + 2 ID=cds-TGC80817.1;Parent=gene-C9F09_22960;Dbxref=NCBI_GP:TGC80817.1;Name=TGC80817.1;gbkey=CDS;gene=hypD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457251.1;locus_tag=C9F09_22960;partial=true;product=hydrogenase formation protein HypD;protein_id=TGC80817.1;start_range=.,1;transl_table=11 PYKB01001336.1 Genbank gene 695 1705 . + . ID=gene-C9F09_22965;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=C9F09_22965 PYKB01001336.1 Protein Homology CDS 695 1705 . + 0 ID=cds-TGC80818.1;Parent=gene-C9F09_22965;Dbxref=NCBI_GP:TGC80818.1;Name=TGC80818.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=C9F09_22965;product=hydrogenase expression/formation protein HypE;protein_id=TGC80818.1;transl_table=11 PYKB01001336.1 Genbank gene 1924 2922 . + . ID=gene-C9F09_22970;Name=C9F09_22970;end_range=2922,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22970;partial=true PYKB01001336.1 Protein Homology CDS 1924 2922 . + 0 ID=cds-TGC80819.1;Parent=gene-C9F09_22970;Dbxref=NCBI_GP:TGC80819.1;Name=TGC80819.1;Note=regulates the expression of formate dehydrogenase H and hydrogenase-3 structural genes;end_range=2922,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=C9F09_22970;partial=true;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=TGC80819.1;transl_table=11 ##sequence-region PYKB01000485.1 1 2922 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000485.1 Genbank region 1 2922 . + . ID=PYKB01000485.1:1..2922;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000485.1 Genbank gene 1 2922 . + . ID=gene-C9F09_06075;Name=C9F09_06075;end_range=2922,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06075;partial=true;start_range=.,1 PYKB01000485.1 Protein Homology CDS 1 2922 . + 0 ID=cds-TGC97980.1;Parent=gene-C9F09_06075;Dbxref=NCBI_GP:TGC97980.1;Name=TGC97980.1;end_range=2922,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461448.1;locus_tag=C9F09_06075;partial=true;product=hypothetical protein;protein_id=TGC97980.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001025.1 1 2915 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001025.1 Genbank region 1 2915 . + . ID=PYKB01001025.1:1..2915;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001025.1 Genbank pseudogene 1 351 . + . ID=gene-C9F09_17125;Name=C9F09_17125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17125;pseudo=true PYKB01001025.1 Protein Homology CDS 1 351 . + 0 ID=cds-C9F09_17125;Parent=gene-C9F09_17125;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457101.1;locus_tag=C9F09_17125;product=transcriptional regulator;pseudo=true;transl_table=11 PYKB01001025.1 Genbank gene 390 1307 . - . ID=gene-C9F09_17130;Name=C9F09_17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17130 PYKB01001025.1 Protein Homology CDS 390 1307 . - 0 ID=cds-TGC87707.1;Parent=gene-C9F09_17130;Dbxref=NCBI_GP:TGC87707.1;Name=TGC87707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=C9F09_17130;product=oxidoreductase;protein_id=TGC87707.1;transl_table=11 PYKB01001025.1 Genbank gene 1329 2525 . - . ID=gene-C9F09_17135;Name=C9F09_17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17135 PYKB01001025.1 Protein Homology CDS 1329 2525 . - 0 ID=cds-TGC87708.1;Parent=gene-C9F09_17135;Dbxref=NCBI_GP:TGC87708.1;Name=TGC87708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=C9F09_17135;product=MFS transporter;protein_id=TGC87708.1;transl_table=11 PYKB01001025.1 Genbank gene 2641 2915 . + . ID=gene-C9F09_17140;Name=C9F09_17140;end_range=2915,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17140;partial=true PYKB01001025.1 Protein Homology CDS 2641 2915 . + 0 ID=cds-TGC87709.1;Parent=gene-C9F09_17140;Dbxref=NCBI_GP:TGC87709.1;Name=TGC87709.1;end_range=2915,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457104.1;locus_tag=C9F09_17140;partial=true;product=LysR family transcriptional regulator;protein_id=TGC87709.1;transl_table=11 ##sequence-region PYKB01001144.1 1 2915 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001144.1 Genbank region 1 2915 . + . ID=PYKB01001144.1:1..2915;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001144.1 Genbank gene 1 172 . - . ID=gene-C9F09_19345;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=C9F09_19345;partial=true;start_range=.,1 PYKB01001144.1 Protein Homology CDS 1 172 . - 0 ID=cds-TGC84843.1;Parent=gene-C9F09_19345;Dbxref=NCBI_GP:TGC84843.1;Name=TGC84843.1;gbkey=CDS;gene=cas2e;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457326.1;locus_tag=C9F09_19345;partial=true;product=type I-E CRISPR-associated endoribonuclease Cas2;protein_id=TGC84843.1;start_range=.,1;transl_table=11 PYKB01001144.1 Genbank gene 175 1092 . - . ID=gene-C9F09_19350;Name=C9F09_19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19350 PYKB01001144.1 Protein Homology CDS 175 1092 . - 0 ID=cds-TGC84844.1;Parent=gene-C9F09_19350;Dbxref=NCBI_GP:TGC84844.1;Name=TGC84844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457327.1;locus_tag=C9F09_19350;product=subtype I-E CRISPR-associated endonuclease Cas1;protein_id=TGC84844.1;transl_table=11 PYKB01001144.1 Genbank gene 1092 1796 . - . ID=gene-C9F09_19355;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=C9F09_19355 PYKB01001144.1 Protein Homology CDS 1092 1796 . - 0 ID=cds-TGC84845.1;Parent=gene-C9F09_19355;Dbxref=NCBI_GP:TGC84845.1;Name=TGC84845.1;gbkey=CDS;gene=cas6e;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457328.1;locus_tag=C9F09_19355;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=TGC84845.1;transl_table=11 PYKB01001144.1 Genbank gene 1796 2521 . - . ID=gene-C9F09_19360;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=C9F09_19360 PYKB01001144.1 Protein Homology CDS 1796 2521 . - 0 ID=cds-TGC84846.1;Parent=gene-C9F09_19360;Dbxref=NCBI_GP:TGC84846.1;Name=TGC84846.1;gbkey=CDS;gene=cas5e;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457329.1;locus_tag=C9F09_19360;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=TGC84846.1;transl_table=11 PYKB01001144.1 Genbank gene 2531 2915 . - . ID=gene-C9F09_19365;Name=C9F09_19365;end_range=2915,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19365;partial=true PYKB01001144.1 Protein Homology CDS 2531 2915 . - 1 ID=cds-TGC84847.1;Parent=gene-C9F09_19365;Dbxref=NCBI_GP:TGC84847.1;Name=TGC84847.1;end_range=2915,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457330.1;locus_tag=C9F09_19365;partial=true;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=TGC84847.1;transl_table=11 ##sequence-region PYKB01001126.1 1 10284 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001126.1 Genbank region 1 10284 . + . ID=PYKB01001126.1:1..10284;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001126.1 Genbank gene 1 427 . - . ID=gene-C9F09_18960;Name=C9F09_18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18960;partial=true;start_range=.,1 PYKB01001126.1 Protein Homology CDS 1 427 . - 0 ID=cds-TGC85346.1;Parent=gene-C9F09_18960;Dbxref=NCBI_GP:TGC85346.1;Name=TGC85346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313290.1;locus_tag=C9F09_18960;partial=true;product=hypothetical protein;protein_id=TGC85346.1;start_range=.,1;transl_table=11 PYKB01001126.1 Genbank gene 427 5367 . - . ID=gene-C9F09_18965;Name=C9F09_18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18965 PYKB01001126.1 Protein Homology CDS 427 5367 . - 0 ID=cds-TGC85347.1;Parent=gene-C9F09_18965;Dbxref=NCBI_GP:TGC85347.1;Name=TGC85347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313289.1;locus_tag=C9F09_18965;product=hypothetical protein;protein_id=TGC85347.1;transl_table=11 PYKB01001126.1 Genbank gene 5370 8201 . - . ID=gene-C9F09_18970;Name=C9F09_18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18970 PYKB01001126.1 Protein Homology CDS 5370 8201 . - 0 ID=cds-TGC85348.1;Parent=gene-C9F09_18970;Dbxref=NCBI_GP:TGC85348.1;Name=TGC85348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313288.1;locus_tag=C9F09_18970;product=ATP-dependent helicase;protein_id=TGC85348.1;transl_table=11 PYKB01001126.1 Genbank gene 8846 9625 . - . ID=gene-C9F09_18975;Name=C9F09_18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18975 PYKB01001126.1 Protein Homology CDS 8846 9625 . - 0 ID=cds-TGC85349.1;Parent=gene-C9F09_18975;Dbxref=NCBI_GP:TGC85349.1;Name=TGC85349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012737308.1;locus_tag=C9F09_18975;product=HNH endonuclease;protein_id=TGC85349.1;transl_table=11 PYKB01001126.1 Genbank gene 9786 10100 . + . ID=gene-C9F09_18980;Name=C9F09_18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18980 PYKB01001126.1 Protein Homology CDS 9786 10100 . + 0 ID=cds-TGC85350.1;Parent=gene-C9F09_18980;Dbxref=NCBI_GP:TGC85350.1;Name=TGC85350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936735.1;locus_tag=C9F09_18980;product=hypothetical protein;protein_id=TGC85350.1;transl_table=11 PYKB01001126.1 Genbank gene 10097 10284 . - . ID=gene-C9F09_18985;Name=C9F09_18985;end_range=10284,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18985;partial=true PYKB01001126.1 Protein Homology CDS 10097 10284 . - 2 ID=cds-TGC85351.1;Parent=gene-C9F09_18985;Dbxref=NCBI_GP:TGC85351.1;Name=TGC85351.1;end_range=10284,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463347.1;locus_tag=C9F09_18985;partial=true;product=integrase;protein_id=TGC85351.1;transl_table=11 ##sequence-region PYKB01000179.1 1 2910 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000179.1 Genbank region 1 2910 . + . ID=PYKB01000179.1:1..2910;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000179.1 Genbank gene 1 310 . + . ID=gene-C9F09_02000;Name=C9F09_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02000;partial=true;start_range=.,1 PYKB01000179.1 Protein Homology CDS 1 310 . + 1 ID=cds-TGD03835.1;Parent=gene-C9F09_02000;Dbxref=NCBI_GP:TGD03835.1;Name=TGD03835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=C9F09_02000;partial=true;product=DNA/RNA nuclease SfsA;protein_id=TGD03835.1;start_range=.,1;transl_table=11 PYKB01000179.1 Genbank gene 487 942 . + . ID=gene-C9F09_02005;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=C9F09_02005 PYKB01000179.1 Protein Homology CDS 487 942 . + 0 ID=cds-TGD03836.1;Parent=gene-C9F09_02005;Dbxref=NCBI_GP:TGD03836.1;Name=TGD03836.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454802.1;locus_tag=C9F09_02005;product=RNA polymerase-binding transcription factor DksA;protein_id=TGD03836.1;transl_table=11 PYKB01000179.1 Genbank gene 1011 1907 . + . ID=gene-C9F09_02010;Name=C9F09_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02010 PYKB01000179.1 Protein Homology CDS 1011 1907 . + 0 ID=cds-TGD03837.1;Parent=gene-C9F09_02010;Dbxref=NCBI_GP:TGD03837.1;Name=TGD03837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454801.1;locus_tag=C9F09_02010;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=TGD03837.1;transl_table=11 PYKB01000179.1 Genbank gene 2048 2910 . + . ID=gene-C9F09_02015;Name=pcnB;end_range=2910,.;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=C9F09_02015;partial=true PYKB01000179.1 Protein Homology CDS 2048 2910 . + 0 ID=cds-TGD03838.1;Parent=gene-C9F09_02015;Dbxref=NCBI_GP:TGD03838.1;Name=TGD03838.1;Note=Polymerase that creates the 3' poly(A) tail found in some mRNA's;end_range=2910,.;gbkey=CDS;gene=pcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454800.1;locus_tag=C9F09_02015;partial=true;product=polynucleotide adenylyltransferase;protein_id=TGD03838.1;transl_table=11 ##sequence-region PYKB01000887.1 1 2909 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000887.1 Genbank region 1 2909 . + . ID=PYKB01000887.1:1..2909;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000887.1 Genbank pseudogene 1 331 . + . ID=gene-C9F09_14485;Name=C9F09_14485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_14485;pseudo=true PYKB01000887.1 Protein Homology CDS 1 331 . + 1 ID=cds-C9F09_14485;Parent=gene-C9F09_14485;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=C9F09_14485;product=DNA/RNA non-specific endonuclease;pseudo=true;transl_table=11 PYKB01000887.1 Genbank pseudogene 504 709 . + . ID=gene-C9F09_14490;Name=C9F09_14490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_14490;pseudo=true PYKB01000887.1 Protein Homology CDS 504 709 . + 0 ID=cds-C9F09_14490;Parent=gene-C9F09_14490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447756.1;locus_tag=C9F09_14490;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000887.1 Genbank gene 1016 2239 . - . ID=gene-C9F09_14495;Name=C9F09_14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14495 PYKB01000887.1 Protein Homology CDS 1016 2239 . - 0 ID=cds-TGC90488.1;Parent=gene-C9F09_14495;Dbxref=NCBI_GP:TGC90488.1;Name=TGC90488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456180.1;locus_tag=C9F09_14495;product=O-antigen polymerase;protein_id=TGC90488.1;transl_table=11 PYKB01000887.1 Genbank pseudogene 2546 2906 . + . ID=gene-C9F09_14500;Name=C9F09_14500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_14500;pseudo=true PYKB01000887.1 Protein Homology CDS 2546 2906 . + 0 ID=cds-C9F09_14500;Parent=gene-C9F09_14500;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016063166.1;locus_tag=C9F09_14500;product=DNA polymerase V;pseudo=true;transl_table=11 ##sequence-region PYKB01000500.1 1 2905 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000500.1 Genbank region 1 2905 . + . ID=PYKB01000500.1:1..2905;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000500.1 Genbank pseudogene 50 1357 . + . ID=gene-C9F09_06405;Name=C9F09_06405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_06405;pseudo=true PYKB01000500.1 Protein Homology CDS 50 1357 . + 0 ID=cds-C9F09_06405;Parent=gene-C9F09_06405;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=C9F09_06405;product=ribose ABC transporter ATP-binding protein RbsA;pseudo=true;transl_table=11 PYKB01000500.1 Genbank gene 1363 2328 . + . ID=gene-C9F09_06410;Name=C9F09_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06410 PYKB01000500.1 Protein Homology CDS 1363 2328 . + 0 ID=cds-TGC97680.1;Parent=gene-C9F09_06410;Dbxref=NCBI_GP:TGC97680.1;Name=TGC97680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=C9F09_06410;product=ribose ABC transporter permease;protein_id=TGC97680.1;transl_table=11 PYKB01000500.1 Genbank gene 2353 2905 . + . ID=gene-C9F09_06415;Name=C9F09_06415;end_range=2905,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06415;partial=true PYKB01000500.1 Protein Homology CDS 2353 2905 . + 0 ID=cds-TGC97681.1;Parent=gene-C9F09_06415;Dbxref=NCBI_GP:TGC97681.1;Name=TGC97681.1;end_range=2905,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458059.1;locus_tag=C9F09_06415;partial=true;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=TGC97681.1;transl_table=11 ##sequence-region PYKB01000720.1 1 2904 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000720.1 Genbank region 1 2904 . + . ID=PYKB01000720.1:1..2904;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000720.1 Genbank gene 1 421 . - . ID=gene-C9F09_11015;Name=C9F09_11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11015;partial=true;start_range=.,1 PYKB01000720.1 Protein Homology CDS 1 421 . - 0 ID=cds-TGC93451.1;Parent=gene-C9F09_11015;Dbxref=NCBI_GP:TGC93451.1;Name=TGC93451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=C9F09_11015;partial=true;product=hypothetical protein;protein_id=TGC93451.1;start_range=.,1;transl_table=11 PYKB01000720.1 Genbank gene 532 1974 . - . ID=gene-C9F09_11020;Name=C9F09_11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11020 PYKB01000720.1 Protein Homology CDS 532 1974 . - 0 ID=cds-TGC93452.1;Parent=gene-C9F09_11020;Dbxref=NCBI_GP:TGC93452.1;Name=TGC93452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456653.1;locus_tag=C9F09_11020;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=TGC93452.1;transl_table=11 PYKB01000720.1 Genbank pseudogene 1971 2819 . - . ID=gene-C9F09_11025;Name=C9F09_11025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11025;pseudo=true PYKB01000720.1 Protein Homology CDS 1971 2819 . - 0 ID=cds-C9F09_11025;Parent=gene-C9F09_11025;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456654.1;locus_tag=C9F09_11025;product=colanic acid biosynthesis glycosyltransferase WcaI;pseudo=true;transl_table=11 ##sequence-region PYKB01000536.1 1 2902 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000536.1 Genbank region 1 2902 . + . ID=PYKB01000536.1:1..2902;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000536.1 Genbank gene 76 447 . + . ID=gene-C9F09_07290;Name=C9F09_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07290 PYKB01000536.1 Protein Homology CDS 76 447 . + 0 ID=cds-TGC96847.1;Parent=gene-C9F09_07290;Dbxref=NCBI_GP:TGC96847.1;Name=TGC96847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001640297.1;locus_tag=C9F09_07290;product=molybdate-binding domain ModE;protein_id=TGC96847.1;transl_table=11 PYKB01000536.1 Genbank gene 515 1990 . + . ID=gene-C9F09_07295;Name=C9F09_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07295 PYKB01000536.1 Protein Homology CDS 515 1990 . + 0 ID=cds-TGC96848.1;Parent=gene-C9F09_07295;Dbxref=NCBI_GP:TGC96848.1;Name=TGC96848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455320.1;locus_tag=C9F09_07295;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=TGC96848.1;transl_table=11 PYKB01000536.1 Genbank gene 2161 2865 . + . ID=gene-C9F09_07300;Name=C9F09_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07300 PYKB01000536.1 Protein Homology CDS 2161 2865 . + 0 ID=cds-TGC96849.1;Parent=gene-C9F09_07300;Dbxref=NCBI_GP:TGC96849.1;Name=TGC96849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455319.1;locus_tag=C9F09_07300;product=DUF2167 domain-containing protein;protein_id=TGC96849.1;transl_table=11 ##sequence-region PYKB01001676.1 1 2900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001676.1 Genbank region 1 2900 . + . ID=PYKB01001676.1:1..2900;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001676.1 Genbank gene 104 751 . + . ID=gene-C9F09_29155;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=C9F09_29155 PYKB01001676.1 Protein Homology CDS 104 751 . + 0 ID=cds-TGC72971.1;Parent=gene-C9F09_29155;Dbxref=NCBI_GP:TGC72971.1;Name=TGC72971.1;gbkey=CDS;gene=fucA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=C9F09_29155;product=L-fuculose-phosphate aldolase;protein_id=TGC72971.1;transl_table=11 PYKB01001676.1 Genbank gene 768 1916 . + . ID=gene-C9F09_29160;Name=C9F09_29160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29160 PYKB01001676.1 Protein Homology CDS 768 1916 . + 0 ID=cds-TGC72972.1;Parent=gene-C9F09_29160;Dbxref=NCBI_GP:TGC72972.1;Name=TGC72972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=C9F09_29160;product=lactaldehyde reductase;protein_id=TGC72972.1;transl_table=11 PYKB01001676.1 Genbank gene 2008 2823 . - . ID=gene-C9F09_29165;Name=C9F09_29165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29165 PYKB01001676.1 Protein Homology CDS 2008 2823 . - 0 ID=cds-TGC72973.1;Parent=gene-C9F09_29165;Dbxref=NCBI_GP:TGC72973.1;Name=TGC72973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457367.1;locus_tag=C9F09_29165;product=flap endonuclease Xni;protein_id=TGC72973.1;transl_table=11 ##sequence-region PYKB01000670.1 1 2900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000670.1 Genbank region 1 2900 . + . ID=PYKB01000670.1:1..2900;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000670.1 Genbank gene 1 491 . - . ID=gene-C9F09_10050;Name=C9F09_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10050;partial=true;start_range=.,1 PYKB01000670.1 Protein Homology CDS 1 491 . - 0 ID=cds-TGC94072.1;Parent=gene-C9F09_10050;Dbxref=NCBI_GP:TGC94072.1;Name=TGC94072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=C9F09_10050;partial=true;product=hypothetical protein;protein_id=TGC94072.1;start_range=.,1;transl_table=11 PYKB01000670.1 Genbank pseudogene 523 1458 . - . ID=gene-C9F09_10055;Name=C9F09_10055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10055;pseudo=true PYKB01000670.1 Protein Homology CDS 523 1458 . - 0 ID=cds-C9F09_10055;Parent=gene-C9F09_10055;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455230.1;locus_tag=C9F09_10055;product=pyrimidine-specific ribonucleoside hydrolase RihA;pseudo=true;transl_table=11 PYKB01000670.1 Genbank gene 1575 2300 . - . ID=gene-C9F09_10060;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=C9F09_10060 PYKB01000670.1 Protein Homology CDS 1575 2300 . - 0 ID=cds-TGC94070.1;Parent=gene-C9F09_10060;Dbxref=NCBI_GP:TGC94070.1;Name=TGC94070.1;Note=With ArtMQJI transports arginine across the inner membrane;gbkey=CDS;gene=artP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020457015.1;locus_tag=C9F09_10060;product=arginine transporter ATP-binding subunit;protein_id=TGC94070.1;transl_table=11 PYKB01000670.1 Genbank gene 2300 2900 . - . ID=gene-C9F09_10065;Name=C9F09_10065;end_range=2900,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10065;partial=true PYKB01000670.1 Protein Homology CDS 2300 2900 . - 1 ID=cds-TGC94071.1;Parent=gene-C9F09_10065;Dbxref=NCBI_GP:TGC94071.1;Name=TGC94071.1;Note=with GltJLPS and GadC for glutamate and GltJLP%2C DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate;end_range=2900,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272794.1;locus_tag=C9F09_10065;partial=true;product=amino acid ABC transporter permease;protein_id=TGC94071.1;transl_table=11 ##sequence-region PYKB01001732.1 1 2898 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001732.1 Genbank region 1 2898 . + . ID=PYKB01001732.1:1..2898;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001732.1 Genbank gene 1 1081 . + . ID=gene-C9F09_30350;Name=C9F09_30350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30350;partial=true;start_range=.,1 PYKB01001732.1 Protein Homology CDS 1 1081 . + 1 ID=cds-TGC71107.1;Parent=gene-C9F09_30350;Dbxref=NCBI_GP:TGC71107.1;Name=TGC71107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=C9F09_30350;partial=true;product=catalase-peroxidase;protein_id=TGC71107.1;start_range=.,1;transl_table=11 PYKB01001732.1 Genbank gene 1139 1762 . - . ID=gene-C9F09_30355;Name=C9F09_30355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30355 PYKB01001732.1 Protein Homology CDS 1139 1762 . - 0 ID=cds-TGC71108.1;Parent=gene-C9F09_30355;Dbxref=NCBI_GP:TGC71108.1;Name=TGC71108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=C9F09_30355;product=DUF1287 domain-containing protein;protein_id=TGC71108.1;transl_table=11 PYKB01001732.1 Genbank gene 2021 2898 . - . ID=gene-C9F09_30360;Name=gldA;end_range=2898,.;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=C9F09_30360;partial=true PYKB01001732.1 Protein Homology CDS 2021 2898 . - 2 ID=cds-TGC71109.1;Parent=gene-C9F09_30360;Dbxref=NCBI_GP:TGC71109.1;Name=TGC71109.1;Note=forms dimers and octamers%3B involved in conversion of glycerol to dihydroxy-acetone;end_range=2898,.;gbkey=CDS;gene=gldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=C9F09_30360;partial=true;product=glycerol dehydrogenase;protein_id=TGC71109.1;transl_table=11 ##sequence-region PYKB01001748.1 1 2889 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001748.1 Genbank region 1 2889 . + . ID=PYKB01001748.1:1..2889;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001748.1 Genbank gene 1 684 . - . ID=gene-C9F09_30645;Name=C9F09_30645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30645;partial=true;start_range=.,1 PYKB01001748.1 Protein Homology CDS 1 684 . - 0 ID=cds-TGC70546.1;Parent=gene-C9F09_30645;Dbxref=NCBI_GP:TGC70546.1;Name=TGC70546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=C9F09_30645;partial=true;product=dipeptide ABC transporter permease DppC;protein_id=TGC70546.1;start_range=.,1;transl_table=11 PYKB01001748.1 Genbank gene 694 1713 . - . ID=gene-C9F09_30650;Name=C9F09_30650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30650 PYKB01001748.1 Protein Homology CDS 694 1713 . - 0 ID=cds-TGC70547.1;Parent=gene-C9F09_30650;Dbxref=NCBI_GP:TGC70547.1;Name=TGC70547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=C9F09_30650;product=dipeptide ABC transporter permease DppB;protein_id=TGC70547.1;transl_table=11 PYKB01001748.1 Genbank gene 1870 2889 . - . ID=gene-C9F09_30655;Name=C9F09_30655;end_range=2889,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30655;partial=true PYKB01001748.1 Protein Homology CDS 1870 2889 . - 0 ID=cds-TGC70548.1;Parent=gene-C9F09_30655;Dbxref=NCBI_GP:TGC70548.1;Name=TGC70548.1;Note=DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides;end_range=2889,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=C9F09_30655;partial=true;product=ABC transporter substrate-binding protein;protein_id=TGC70548.1;transl_table=11 ##sequence-region PYKB01000453.1 1 2887 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000453.1 Genbank region 1 2887 . + . ID=PYKB01000453.1:1..2887;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000453.1 Genbank gene 1 104 . + . ID=gene-C9F09_05635;Name=C9F09_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05635;partial=true;start_range=.,1 PYKB01000453.1 Protein Homology CDS 1 104 . + 2 ID=cds-TGC98569.1;Parent=gene-C9F09_05635;Dbxref=NCBI_GP:TGC98569.1;Name=TGC98569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457630.1;locus_tag=C9F09_05635;partial=true;product=propionate kinase;protein_id=TGC98569.1;start_range=.,1;transl_table=11 PYKB01000453.1 Genbank gene 138 2432 . + . ID=gene-C9F09_05640;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=C9F09_05640 PYKB01000453.1 Protein Homology CDS 138 2432 . + 0 ID=cds-TGC98570.1;Parent=gene-C9F09_05640;Dbxref=NCBI_GP:TGC98570.1;Name=TGC98570.1;gbkey=CDS;gene=pflB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=C9F09_05640;product=formate C-acetyltransferase;protein_id=TGC98570.1;transl_table=11 PYKB01000453.1 Genbank gene 2502 2887 . + . ID=gene-C9F09_05645;Name=C9F09_05645;end_range=2887,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05645;partial=true PYKB01000453.1 Protein Homology CDS 2502 2887 . + 0 ID=cds-TGC98571.1;Parent=gene-C9F09_05645;Dbxref=NCBI_GP:TGC98571.1;Name=TGC98571.1;Note=catalyzes the formation of pyruvate from serine;end_range=2887,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=C9F09_05645;partial=true;product=L-serine ammonia-lyase;protein_id=TGC98571.1;transl_table=11 ##sequence-region PYKB01000511.1 1 10227 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000511.1 Genbank region 1 10227 . + . ID=PYKB01000511.1:1..10227;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000511.1 Genbank gene 1 105 . - . ID=gene-C9F09_06710;Name=C9F09_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06710;partial=true;start_range=.,1 PYKB01000511.1 Protein Homology CDS 1 105 . - 0 ID=cds-TGC97346.1;Parent=gene-C9F09_06710;Dbxref=NCBI_GP:TGC97346.1;Name=TGC97346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521673.1;locus_tag=C9F09_06710;partial=true;product=isocitrate dehydrogenase;protein_id=TGC97346.1;start_range=.,1;transl_table=11 PYKB01000511.1 Genbank gene 359 1030 . + . ID=gene-C9F09_06715;Name=C9F09_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06715 PYKB01000511.1 Protein Homology CDS 359 1030 . + 0 ID=cds-TGC97335.1;Parent=gene-C9F09_06715;Dbxref=NCBI_GP:TGC97335.1;Name=TGC97335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807727.1;locus_tag=C9F09_06715;product=DUF159 family protein;protein_id=TGC97335.1;transl_table=11 PYKB01000511.1 Genbank gene 1049 1519 . + . ID=gene-C9F09_06720;Name=C9F09_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06720 PYKB01000511.1 Protein Homology CDS 1049 1519 . + 0 ID=cds-TGC97336.1;Parent=gene-C9F09_06720;Dbxref=NCBI_GP:TGC97336.1;Name=TGC97336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000374058.1;locus_tag=C9F09_06720;product=hypothetical protein;protein_id=TGC97336.1;transl_table=11 PYKB01000511.1 Genbank gene 1492 2760 . - . ID=gene-C9F09_06725;Name=C9F09_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06725 PYKB01000511.1 Protein Homology CDS 1492 2760 . - 0 ID=cds-TGC97337.1;Parent=gene-C9F09_06725;Dbxref=NCBI_GP:TGC97337.1;Name=TGC97337.1;Note=binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415702.1;locus_tag=C9F09_06725;product=DNA polymerase V subunit UmuC;protein_id=TGC97337.1;transl_table=11 PYKB01000511.1 Genbank gene 2762 3181 . - . ID=gene-C9F09_06730;Name=C9F09_06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06730 PYKB01000511.1 Protein Homology CDS 2762 3181 . - 0 ID=cds-TGC97347.1;Parent=gene-C9F09_06730;Dbxref=NCBI_GP:TGC97347.1;Name=TGC97347.1;Note=binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784491.1;locus_tag=C9F09_06730;product=translesion error-prone DNA polymerase V subunit UmuD;protein_id=TGC97347.1;transl_table=11 PYKB01000511.1 Genbank gene 3259 3501 . + . ID=gene-C9F09_06735;Name=C9F09_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06735 PYKB01000511.1 Protein Homology CDS 3259 3501 . + 0 ID=cds-TGC97338.1;Parent=gene-C9F09_06735;Dbxref=NCBI_GP:TGC97338.1;Name=TGC97338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003840043.1;locus_tag=C9F09_06735;product=DinI family protein;protein_id=TGC97338.1;transl_table=11 PYKB01000511.1 Genbank gene 3576 4094 . - . ID=gene-C9F09_06740;Name=C9F09_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06740 PYKB01000511.1 Protein Homology CDS 3576 4094 . - 0 ID=cds-TGC97339.1;Parent=gene-C9F09_06740;Dbxref=NCBI_GP:TGC97339.1;Name=TGC97339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006675316.1;locus_tag=C9F09_06740;product=phage tail protein;protein_id=TGC97339.1;transl_table=11 PYKB01000511.1 Genbank gene 4097 5338 . - . ID=gene-C9F09_06745;Name=C9F09_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06745 PYKB01000511.1 Protein Homology CDS 4097 5338 . - 0 ID=cds-TGC97340.1;Parent=gene-C9F09_06745;Dbxref=NCBI_GP:TGC97340.1;Name=TGC97340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461178.1;locus_tag=C9F09_06745;product=hypothetical protein;protein_id=TGC97340.1;transl_table=11 PYKB01000511.1 Genbank gene 5325 5912 . - . ID=gene-C9F09_06750;Name=C9F09_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06750 PYKB01000511.1 Protein Homology CDS 5325 5912 . - 0 ID=cds-TGC97341.1;Parent=gene-C9F09_06750;Dbxref=NCBI_GP:TGC97341.1;Name=TGC97341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001207831.1;locus_tag=C9F09_06750;product=phage tail protein;protein_id=TGC97341.1;transl_table=11 PYKB01000511.1 Genbank gene 5915 6994 . - . ID=gene-C9F09_06755;Name=C9F09_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06755 PYKB01000511.1 Protein Homology CDS 5915 6994 . - 0 ID=cds-TGC97342.1;Parent=gene-C9F09_06755;Dbxref=NCBI_GP:TGC97342.1;Name=TGC97342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000785580.1;locus_tag=C9F09_06755;product=phage baseplate protein;protein_id=TGC97342.1;transl_table=11 PYKB01000511.1 Genbank gene 6987 7400 . - . ID=gene-C9F09_06760;Name=C9F09_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06760 PYKB01000511.1 Protein Homology CDS 6987 7400 . - 0 ID=cds-TGC97343.1;Parent=gene-C9F09_06760;Dbxref=NCBI_GP:TGC97343.1;Name=TGC97343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000605050.1;locus_tag=C9F09_06760;product=hypothetical protein;protein_id=TGC97343.1;transl_table=11 PYKB01000511.1 Genbank gene 7405 7938 . - . ID=gene-C9F09_06765;Name=C9F09_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06765 PYKB01000511.1 Protein Homology CDS 7405 7938 . - 0 ID=cds-TGC97344.1;Parent=gene-C9F09_06765;Dbxref=NCBI_GP:TGC97344.1;Name=TGC97344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273649.1;locus_tag=C9F09_06765;product=phage baseplate assembly protein V;protein_id=TGC97344.1;transl_table=11 PYKB01000511.1 Genbank gene 7938 8996 . - . ID=gene-C9F09_06770;Name=C9F09_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06770 PYKB01000511.1 Protein Homology CDS 7938 8996 . - 0 ID=cds-TGC97345.1;Parent=gene-C9F09_06770;Dbxref=NCBI_GP:TGC97345.1;Name=TGC97345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066639.1;locus_tag=C9F09_06770;product=baseplate protein;protein_id=TGC97345.1;transl_table=11 PYKB01000511.1 Genbank gene 8993 10227 . - . ID=gene-C9F09_06775;Name=C9F09_06775;end_range=10227,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06775;partial=true PYKB01000511.1 Protein Homology CDS 8993 10227 . - 2 ID=cds-TGC97348.1;Parent=gene-C9F09_06775;Dbxref=NCBI_GP:TGC97348.1;Name=TGC97348.1;end_range=10227,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742721.1;locus_tag=C9F09_06775;partial=true;product=DNA circularization protein;protein_id=TGC97348.1;transl_table=11 ##sequence-region PYKB01001621.1 1 2884 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001621.1 Genbank region 1 2884 . + . ID=PYKB01001621.1:1..2884;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001621.1 Genbank gene 126 1811 . - . ID=gene-C9F09_28405;Name=C9F09_28405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28405 PYKB01001621.1 Protein Homology CDS 126 1811 . - 0 ID=cds-TGC74418.1;Parent=gene-C9F09_28405;Dbxref=NCBI_GP:TGC74418.1;Name=TGC74418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456291.1;locus_tag=C9F09_28405;product=C4-dicarboxylic acid transporter DauA;protein_id=TGC74418.1;transl_table=11 PYKB01001621.1 Genbank gene 1936 2874 . - . ID=gene-C9F09_28410;Name=C9F09_28410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28410 PYKB01001621.1 Protein Homology CDS 1936 2874 . - 0 ID=cds-TGC74419.1;Parent=gene-C9F09_28410;Dbxref=NCBI_GP:TGC74419.1;Name=TGC74419.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456290.1;locus_tag=C9F09_28410;product=ribose-phosphate pyrophosphokinase;protein_id=TGC74419.1;transl_table=11 ##sequence-region PYKB01001170.1 1 2883 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001170.1 Genbank region 1 2883 . + . ID=PYKB01001170.1:1..2883;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001170.1 Genbank gene 1 806 . - . ID=gene-C9F09_19770;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=C9F09_19770;partial=true;start_range=.,1 PYKB01001170.1 Protein Homology CDS 1 806 . - 0 ID=cds-TGC84307.1;Parent=gene-C9F09_19770;Dbxref=NCBI_GP:TGC84307.1;Name=TGC84307.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=C9F09_19770;partial=true;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=TGC84307.1;start_range=.,1;transl_table=11 PYKB01001170.1 Genbank gene 877 2106 . - . ID=gene-C9F09_19775;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=C9F09_19775 PYKB01001170.1 Protein Homology CDS 877 2106 . - 0 ID=cds-TGC84308.1;Parent=gene-C9F09_19775;Dbxref=NCBI_GP:TGC84308.1;Name=TGC84308.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=C9F09_19775;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=TGC84308.1;transl_table=11 PYKB01001170.1 Genbank gene 2134 2883 . - . ID=gene-C9F09_19780;Name=C9F09_19780;end_range=2883,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19780;partial=true PYKB01001170.1 Protein Homology CDS 2134 2883 . - 0 ID=cds-TGC84309.1;Parent=gene-C9F09_19780;Dbxref=NCBI_GP:TGC84309.1;Name=TGC84309.1;Note=cell invasion protein B%3B required for entry of the bacteria into the host cell%3B induces apoptosis in macrophages;end_range=2883,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457279.1;locus_tag=C9F09_19780;partial=true;product=pathogenicity island 1 effector protein SipB;protein_id=TGC84309.1;transl_table=11 ##sequence-region PYKB01001159.1 1 2866 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001159.1 Genbank region 1 2866 . + . ID=PYKB01001159.1:1..2866;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001159.1 Genbank gene 1 723 . + . ID=gene-C9F09_19590;Name=C9F09_19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19590;partial=true;start_range=.,1 PYKB01001159.1 Protein Homology CDS 1 723 . + 0 ID=cds-TGC84524.1;Parent=gene-C9F09_19590;Dbxref=NCBI_GP:TGC84524.1;Name=TGC84524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=C9F09_19590;partial=true;product=hypothetical protein;protein_id=TGC84524.1;start_range=.,1;transl_table=11 PYKB01001159.1 Genbank gene 720 1754 . + . ID=gene-C9F09_19595;Name=C9F09_19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19595 PYKB01001159.1 Protein Homology CDS 720 1754 . + 0 ID=cds-TGC84525.1;Parent=gene-C9F09_19595;Dbxref=NCBI_GP:TGC84525.1;Name=TGC84525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458369.1;locus_tag=C9F09_19595;product=phosphotriesterase-related protein;protein_id=TGC84525.1;transl_table=11 PYKB01001159.1 Genbank gene 1799 2866 . - . ID=gene-C9F09_19600;Name=ggt;end_range=2866,.;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=C9F09_19600;partial=true PYKB01001159.1 Protein Homology CDS 1799 2866 . - 0 ID=cds-TGC84526.1;Parent=gene-C9F09_19600;Dbxref=NCBI_GP:TGC84526.1;Name=TGC84526.1;end_range=2866,.;gbkey=CDS;gene=ggt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458368.1;locus_tag=C9F09_19600;partial=true;product=gamma-glutamyltransferase;protein_id=TGC84526.1;transl_table=11 ##sequence-region PYKB01000549.1 1 2856 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000549.1 Genbank region 1 2856 . + . ID=PYKB01000549.1:1..2856;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000549.1 Genbank gene 1 260 . - . ID=gene-C9F09_07555;Name=C9F09_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07555;partial=true;start_range=.,1 PYKB01000549.1 Protein Homology CDS 1 260 . - 0 ID=cds-TGC96508.1;Parent=gene-C9F09_07555;Dbxref=NCBI_GP:TGC96508.1;Name=TGC96508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=C9F09_07555;partial=true;product=PTS fructose transporter subunit IID;protein_id=TGC96508.1;start_range=.,1;transl_table=11 PYKB01000549.1 Genbank gene 257 1006 . - . ID=gene-C9F09_07560;Name=C9F09_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07560 PYKB01000549.1 Protein Homology CDS 257 1006 . - 0 ID=cds-TGC96503.1;Parent=gene-C9F09_07560;Dbxref=NCBI_GP:TGC96503.1;Name=TGC96503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458164.1;locus_tag=C9F09_07560;product=PTS sorbose transporter subunit IIC;protein_id=TGC96503.1;transl_table=11 PYKB01000549.1 Genbank gene 1152 1637 . - . ID=gene-C9F09_07565;Name=C9F09_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07565 PYKB01000549.1 Protein Homology CDS 1152 1637 . - 0 ID=cds-TGC96504.1;Parent=gene-C9F09_07565;Dbxref=NCBI_GP:TGC96504.1;Name=TGC96504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458163.1;locus_tag=C9F09_07565;product=PTS sugar transporter;protein_id=TGC96504.1;transl_table=11 PYKB01000549.1 Genbank gene 1648 2073 . - . ID=gene-C9F09_07570;Name=C9F09_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07570 PYKB01000549.1 Protein Homology CDS 1648 2073 . - 0 ID=cds-TGC96505.1;Parent=gene-C9F09_07570;Dbxref=NCBI_GP:TGC96505.1;Name=TGC96505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458162.1;locus_tag=C9F09_07570;product=PTS fructose transporter subunit IIA;protein_id=TGC96505.1;transl_table=11 PYKB01000549.1 Genbank gene 2059 2286 . + . ID=gene-C9F09_07575;Name=C9F09_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07575 PYKB01000549.1 Protein Homology CDS 2059 2286 . + 0 ID=cds-TGC96506.1;Parent=gene-C9F09_07575;Dbxref=NCBI_GP:TGC96506.1;Name=TGC96506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664733.1;locus_tag=C9F09_07575;product=hypothetical protein;protein_id=TGC96506.1;transl_table=11 PYKB01000549.1 Genbank gene 2292 2856 . - . ID=gene-C9F09_07580;Name=C9F09_07580;end_range=2856,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07580;partial=true PYKB01000549.1 Protein Homology CDS 2292 2856 . - 1 ID=cds-TGC96507.1;Parent=gene-C9F09_07580;Dbxref=NCBI_GP:TGC96507.1;Name=TGC96507.1;end_range=2856,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=C9F09_07580;partial=true;product=hypothetical protein;protein_id=TGC96507.1;transl_table=11 ##sequence-region PYKB01001566.1 1 2849 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001566.1 Genbank region 1 2849 . + . ID=PYKB01001566.1:1..2849;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001566.1 Genbank gene 1 1428 . + . ID=gene-C9F09_27325;Name=C9F09_27325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27325;partial=true;start_range=.,1 PYKB01001566.1 Protein Homology CDS 1 1428 . + 0 ID=cds-TGC75625.1;Parent=gene-C9F09_27325;Dbxref=NCBI_GP:TGC75625.1;Name=TGC75625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=C9F09_27325;partial=true;product=penicillin-binding protein activator;protein_id=TGC75625.1;start_range=.,1;transl_table=11 PYKB01001566.1 Genbank gene 1386 1781 . + . ID=gene-C9F09_27330;Name=C9F09_27330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27330 PYKB01001566.1 Protein Homology CDS 1386 1781 . + 0 ID=cds-TGC75626.1;Parent=gene-C9F09_27330;Dbxref=NCBI_GP:TGC75626.1;Name=TGC75626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=C9F09_27330;product=YraN family protein;protein_id=TGC75626.1;transl_table=11 PYKB01001566.1 Genbank gene 1803 2393 . + . ID=gene-C9F09_27335;Name=C9F09_27335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27335 PYKB01001566.1 Protein Homology CDS 1803 2393 . + 0 ID=cds-TGC75627.1;Parent=gene-C9F09_27335;Dbxref=NCBI_GP:TGC75627.1;Name=TGC75627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=C9F09_27335;product=DnaA initiator-associating protein DiaA;protein_id=TGC75627.1;transl_table=11 PYKB01001566.1 Genbank gene 2403 2849 . + . ID=gene-C9F09_27340;Name=C9F09_27340;end_range=2849,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27340;partial=true PYKB01001566.1 Protein Homology CDS 2403 2849 . + 0 ID=cds-TGC75628.1;Parent=gene-C9F09_27340;Dbxref=NCBI_GP:TGC75628.1;Name=TGC75628.1;end_range=2849,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457651.1;locus_tag=C9F09_27340;partial=true;product=osmotically-inducible protein OsmY;protein_id=TGC75628.1;transl_table=11 ##sequence-region PYKB01001086.1 1 2849 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001086.1 Genbank region 1 2849 . + . ID=PYKB01001086.1:1..2849;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001086.1 Genbank gene 56 943 . + . ID=gene-C9F09_18175;Name=C9F09_18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18175 PYKB01001086.1 Protein Homology CDS 56 943 . + 0 ID=cds-TGC86321.1;Parent=gene-C9F09_18175;Dbxref=NCBI_GP:TGC86321.1;Name=TGC86321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002413179.1;locus_tag=C9F09_18175;product=ABC transporter substrate-binding protein;protein_id=TGC86321.1;transl_table=11 PYKB01001086.1 Genbank gene 947 2116 . + . ID=gene-C9F09_18180;Name=C9F09_18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18180 PYKB01001086.1 Protein Homology CDS 947 2116 . + 0 ID=cds-TGC86322.1;Parent=gene-C9F09_18180;Dbxref=NCBI_GP:TGC86322.1;Name=TGC86322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=C9F09_18180;product=osmoprotectant uptake system permease;protein_id=TGC86322.1;transl_table=11 PYKB01001086.1 Genbank gene 2109 2849 . + . ID=gene-C9F09_18185;Name=C9F09_18185;end_range=2849,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18185;partial=true PYKB01001086.1 Protein Homology CDS 2109 2849 . + 0 ID=cds-TGC86323.1;Parent=gene-C9F09_18185;Dbxref=NCBI_GP:TGC86323.1;Name=TGC86323.1;end_range=2849,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456723.1;locus_tag=C9F09_18185;partial=true;product=ATP-binding protein;protein_id=TGC86323.1;transl_table=11 ##sequence-region PYKB01001309.1 1 2839 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001309.1 Genbank region 1 2839 . + . ID=PYKB01001309.1:1..2839;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001309.1 Genbank gene 26 751 . + . ID=gene-C9F09_22490;Name=C9F09_22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22490 PYKB01001309.1 Protein Homology CDS 26 751 . + 0 ID=cds-TGC81378.1;Parent=gene-C9F09_22490;Dbxref=NCBI_GP:TGC81378.1;Name=TGC81378.1;Note=controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457031.1;locus_tag=C9F09_22490;product=DnaA regulatory inactivator Hda;protein_id=TGC81378.1;transl_table=11 PYKB01001309.1 Genbank gene 778 1137 . - . ID=gene-C9F09_22495;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=C9F09_22495 PYKB01001309.1 Protein Homology CDS 778 1137 . - 0 ID=cds-TGC81379.1;Parent=gene-C9F09_22495;Dbxref=NCBI_GP:TGC81379.1;Name=TGC81379.1;gbkey=CDS;gene=arsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311384.1;locus_tag=C9F09_22495;product=arsenate reductase (glutaredoxin);protein_id=TGC81379.1;transl_table=11 PYKB01001309.1 Genbank gene 1177 2640 . - . ID=gene-C9F09_22500;Name=C9F09_22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22500 PYKB01001309.1 Protein Homology CDS 1177 2640 . - 0 ID=cds-TGC81380.1;Parent=gene-C9F09_22500;Dbxref=NCBI_GP:TGC81380.1;Name=TGC81380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457029.1;locus_tag=C9F09_22500;product=beta-barrel assembly-enhancing protease;protein_id=TGC81380.1;transl_table=11 ##sequence-region PYKB01001008.1 1 2837 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001008.1 Genbank region 1 2837 . + . ID=PYKB01001008.1:1..2837;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001008.1 Genbank pseudogene 26 865 . - . ID=gene-C9F09_16805;Name=C9F09_16805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16805;pseudo=true PYKB01001008.1 Protein Homology CDS 26 865 . - 0 ID=cds-C9F09_16805;Parent=gene-C9F09_16805;Note=involved in resistance to the phages N4 and lambda%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=C9F09_16805;product=cyclic di-GMP phosphodiesterase;pseudo=true;transl_table=11 PYKB01001008.1 Genbank gene 1191 1763 . - . ID=gene-C9F09_16810;Name=C9F09_16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16810 PYKB01001008.1 Protein Homology CDS 1191 1763 . - 0 ID=cds-TGC88031.1;Parent=gene-C9F09_16810;Dbxref=NCBI_GP:TGC88031.1;Name=TGC88031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456771.1;locus_tag=C9F09_16810;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=TGC88031.1;transl_table=11 PYKB01001008.1 Genbank gene 1769 1999 . + . ID=gene-C9F09_16815;Name=C9F09_16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16815 PYKB01001008.1 Protein Homology CDS 1769 1999 . + 0 ID=cds-TGC88032.1;Parent=gene-C9F09_16815;Dbxref=NCBI_GP:TGC88032.1;Name=TGC88032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131582.1;locus_tag=C9F09_16815;product=hypothetical protein;protein_id=TGC88032.1;transl_table=11 PYKB01001008.1 Genbank gene 2177 2837 . - . ID=gene-C9F09_16820;Name=C9F09_16820;end_range=2837,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16820;partial=true PYKB01001008.1 Protein Homology CDS 2177 2837 . - 1 ID=cds-TGC88033.1;Parent=gene-C9F09_16820;Dbxref=NCBI_GP:TGC88033.1;Name=TGC88033.1;end_range=2837,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456770.1;locus_tag=C9F09_16820;partial=true;product=hypothetical protein;protein_id=TGC88033.1;transl_table=11 ##sequence-region PYKB01001518.1 1 2830 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001518.1 Genbank region 1 2830 . + . ID=PYKB01001518.1:1..2830;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001518.1 Genbank gene 1 573 . - . ID=gene-C9F09_26320;Name=C9F09_26320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26320;partial=true;start_range=.,1 PYKB01001518.1 Protein Homology CDS 1 573 . - 0 ID=cds-TGC76830.1;Parent=gene-C9F09_26320;Dbxref=NCBI_GP:TGC76830.1;Name=TGC76830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=C9F09_26320;partial=true;product=pilin outer membrane usher protein SafC;protein_id=TGC76830.1;start_range=.,1;transl_table=11 PYKB01001518.1 Genbank gene 597 1337 . - . ID=gene-C9F09_26325;Name=C9F09_26325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26325 PYKB01001518.1 Protein Homology CDS 597 1337 . - 0 ID=cds-TGC76831.1;Parent=gene-C9F09_26325;Dbxref=NCBI_GP:TGC76831.1;Name=TGC76831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454906.1;locus_tag=C9F09_26325;product=pili assembly chaperone protein SafB;protein_id=TGC76831.1;transl_table=11 PYKB01001518.1 Genbank gene 1412 1909 . - . ID=gene-C9F09_26330;Name=C9F09_26330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26330 PYKB01001518.1 Protein Homology CDS 1412 1909 . - 0 ID=cds-TGC76832.1;Parent=gene-C9F09_26330;Dbxref=NCBI_GP:TGC76832.1;Name=TGC76832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789648.1;locus_tag=C9F09_26330;product=Saf-pilin pilus formation protein SafA;protein_id=TGC76832.1;transl_table=11 PYKB01001518.1 Genbank gene 2661 2830 . - . ID=gene-C9F09_26335;Name=C9F09_26335;end_range=2830,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26335;partial=true PYKB01001518.1 Protein Homology CDS 2661 2830 . - 2 ID=cds-TGC76833.1;Parent=gene-C9F09_26335;Dbxref=NCBI_GP:TGC76833.1;Name=TGC76833.1;end_range=2830,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=C9F09_26335;partial=true;product=IS3 family transposase;protein_id=TGC76833.1;transl_table=11 ##sequence-region PYKB01000036.1 1 2830 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000036.1 Genbank region 1 2830 . + . ID=PYKB01000036.1:1..2830;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000036.1 Genbank gene 1 1653 . + . ID=gene-C9F09_00435;Name=C9F09_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00435;partial=true;start_range=.,1 PYKB01000036.1 Protein Homology CDS 1 1653 . + 0 ID=cds-TGD06730.1;Parent=gene-C9F09_00435;Dbxref=NCBI_GP:TGD06730.1;Name=TGD06730.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122596.1;locus_tag=C9F09_00435;partial=true;product=ATP-dependent DNA helicase RecG;protein_id=TGD06730.1;start_range=.,1;transl_table=11 PYKB01000036.1 Genbank pseudogene 1689 2830 . - . ID=gene-C9F09_00440;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=pseudogene;locus_tag=C9F09_00440;pseudo=true PYKB01000036.1 Protein Homology CDS 1689 2830 . - 2 ID=cds-C9F09_00440;Parent=gene-C9F09_00440;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=gltS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458182.1;locus_tag=C9F09_00440;product=sodium/glutamate symporter;pseudo=true;transl_table=11 ##sequence-region PYKB01000232.1 1 10170 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000232.1 Genbank region 1 10170 . + . ID=PYKB01000232.1:1..10170;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000232.1 Genbank gene 8 760 . + . ID=gene-C9F09_02495;Name=C9F09_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02495 PYKB01000232.1 Protein Homology CDS 8 760 . + 0 ID=cds-TGD03043.1;Parent=gene-C9F09_02495;Dbxref=NCBI_GP:TGD03043.1;Name=TGD03043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001614886.1;locus_tag=C9F09_02495;product=triose-phosphate isomerase;protein_id=TGD03043.1;transl_table=11 PYKB01000232.1 Genbank gene 852 1616 . - . ID=gene-C9F09_02500;Name=C9F09_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02500 PYKB01000232.1 Protein Homology CDS 852 1616 . - 0 ID=cds-TGD03036.1;Parent=gene-C9F09_02500;Dbxref=NCBI_GP:TGD03036.1;Name=TGD03036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=C9F09_02500;product=epimerase;protein_id=TGD03036.1;transl_table=11 PYKB01000232.1 Genbank gene 1626 1955 . - . ID=gene-C9F09_02505;Name=C9F09_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02505 PYKB01000232.1 Protein Homology CDS 1626 1955 . - 0 ID=cds-TGD03037.1;Parent=gene-C9F09_02505;Dbxref=NCBI_GP:TGD03037.1;Name=TGD03037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457973.1;locus_tag=C9F09_02505;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=TGD03037.1;transl_table=11 PYKB01000232.1 Genbank gene 1999 2874 . - . ID=gene-C9F09_02510;Name=C9F09_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02510 PYKB01000232.1 Protein Homology CDS 1999 2874 . - 0 ID=cds-TGD03038.1;Parent=gene-C9F09_02510;Dbxref=NCBI_GP:TGD03038.1;Name=TGD03038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457974.1;locus_tag=C9F09_02510;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase LsrF;protein_id=TGD03038.1;transl_table=11 PYKB01000232.1 Genbank gene 2903 3925 . - . ID=gene-C9F09_02515;Name=C9F09_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02515 PYKB01000232.1 Protein Homology CDS 2903 3925 . - 0 ID=cds-TGD03044.1;Parent=gene-C9F09_02515;Dbxref=NCBI_GP:TGD03044.1;Name=TGD03044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=C9F09_02515;product=autoinducer 2 ABC transporter substrate-binding protein;protein_id=TGD03044.1;transl_table=11 PYKB01000232.1 Genbank gene 3954 4955 . - . ID=gene-C9F09_02520;Name=C9F09_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02520 PYKB01000232.1 Protein Homology CDS 3954 4955 . - 0 ID=cds-TGD03039.1;Parent=gene-C9F09_02520;Dbxref=NCBI_GP:TGD03039.1;Name=TGD03039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=C9F09_02520;product=autoinducer 2 ABC transporter permease LsrD;protein_id=TGD03039.1;transl_table=11 PYKB01000232.1 Genbank gene 4952 5995 . - . ID=gene-C9F09_02525;Name=C9F09_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02525 PYKB01000232.1 Protein Homology CDS 4952 5995 . - 0 ID=cds-TGD03040.1;Parent=gene-C9F09_02525;Dbxref=NCBI_GP:TGD03040.1;Name=TGD03040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=C9F09_02525;product=autoinducer 2 ABC transporter permease LsrC;protein_id=TGD03040.1;transl_table=11 PYKB01000232.1 Genbank gene 5989 7524 . - . ID=gene-C9F09_02530;Name=C9F09_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02530 PYKB01000232.1 Protein Homology CDS 5989 7524 . - 0 ID=cds-TGD03041.1;Parent=gene-C9F09_02530;Dbxref=NCBI_GP:TGD03041.1;Name=TGD03041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=C9F09_02530;product=autoinducer 2 import ATP-binding protein LsrA;protein_id=TGD03041.1;transl_table=11 PYKB01000232.1 Genbank gene 7780 8739 . + . ID=gene-C9F09_02535;Name=C9F09_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02535 PYKB01000232.1 Protein Homology CDS 7780 8739 . + 0 ID=cds-TGD03042.1;Parent=gene-C9F09_02535;Dbxref=NCBI_GP:TGD03042.1;Name=TGD03042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457979.1;locus_tag=C9F09_02535;product=LsrR family transcriptional regulator;protein_id=TGD03042.1;transl_table=11 PYKB01000232.1 Genbank gene 8826 10170 . + . ID=gene-C9F09_02540;Name=C9F09_02540;end_range=10170,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02540;partial=true PYKB01000232.1 Protein Homology CDS 8826 10170 . + 0 ID=cds-TGD03045.1;Parent=gene-C9F09_02540;Dbxref=NCBI_GP:TGD03045.1;Name=TGD03045.1;end_range=10170,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457980.1;locus_tag=C9F09_02540;partial=true;product=autoinducer-2 kinase;protein_id=TGD03045.1;transl_table=11 ##sequence-region PYKB01001599.1 1 2829 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001599.1 Genbank region 1 2829 . + . ID=PYKB01001599.1:1..2829;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001599.1 Genbank pseudogene 23 1012 . - . ID=gene-C9F09_28085;Name=C9F09_28085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28085;pseudo=true PYKB01001599.1 Protein Homology CDS 23 1012 . - 0 ID=cds-C9F09_28085;Parent=gene-C9F09_28085;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=C9F09_28085;product=glutamate/aspartate:proton symporter GltP;pseudo=true;transl_table=11 PYKB01001599.1 Genbank gene 1357 1977 . - . ID=gene-C9F09_28090;Name=C9F09_28090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28090 PYKB01001599.1 Protein Homology CDS 1357 1977 . - 0 ID=cds-TGC74814.1;Parent=gene-C9F09_28090;Dbxref=NCBI_GP:TGC74814.1;Name=TGC74814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=C9F09_28090;product=heme lysase NrfEFG subunit NrfG;protein_id=TGC74814.1;transl_table=11 PYKB01001599.1 Genbank gene 1974 2829 . - . ID=gene-C9F09_28095;Name=C9F09_28095;end_range=2829,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28095;partial=true PYKB01001599.1 Protein Homology CDS 1974 2829 . - 1 ID=cds-TGC74815.1;Parent=gene-C9F09_28095;Dbxref=NCBI_GP:TGC74815.1;Name=TGC74815.1;end_range=2829,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9F09_28095;partial=true;product=heme lyase NrfEFG subunit NrfF;protein_id=TGC74815.1;transl_table=11 ##sequence-region PYKB01001140.1 1 2821 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001140.1 Genbank region 1 2821 . + . ID=PYKB01001140.1:1..2821;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001140.1 Genbank gene 1 321 . + . ID=gene-C9F09_19280;Name=C9F09_19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19280;partial=true;start_range=.,1 PYKB01001140.1 Protein Homology CDS 1 321 . + 0 ID=cds-TGC84924.1;Parent=gene-C9F09_19280;Dbxref=NCBI_GP:TGC84924.1;Name=TGC84924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=C9F09_19280;partial=true;product=MFS transporter;protein_id=TGC84924.1;start_range=.,1;transl_table=11 PYKB01001140.1 Genbank gene 336 1538 . + . ID=gene-C9F09_19285;Name=C9F09_19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19285 PYKB01001140.1 Protein Homology CDS 336 1538 . + 0 ID=cds-TGC84925.1;Parent=gene-C9F09_19285;Dbxref=NCBI_GP:TGC84925.1;Name=TGC84925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=C9F09_19285;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=TGC84925.1;transl_table=11 PYKB01001140.1 Genbank gene 1638 1868 . - . ID=gene-C9F09_19290;Name=C9F09_19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19290 PYKB01001140.1 Protein Homology CDS 1638 1868 . - 0 ID=cds-TGC84926.1;Parent=gene-C9F09_19290;Dbxref=NCBI_GP:TGC84926.1;Name=TGC84926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526363.1;locus_tag=C9F09_19290;product=hypothetical protein;protein_id=TGC84926.1;transl_table=11 PYKB01001140.1 Genbank gene 1948 2821 . + . ID=gene-C9F09_19295;Name=C9F09_19295;end_range=2821,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19295;partial=true PYKB01001140.1 Protein Homology CDS 1948 2821 . + 0 ID=cds-TGC84927.1;Parent=gene-C9F09_19295;Dbxref=NCBI_GP:TGC84927.1;Name=TGC84927.1;end_range=2821,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=C9F09_19295;partial=true;product=DNA gyrase subunit A;protein_id=TGC84927.1;transl_table=11 ##sequence-region PYKB01000933.1 1 2806 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000933.1 Genbank region 1 2806 . + . ID=PYKB01000933.1:1..2806;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000933.1 Genbank gene 1 265 . - . ID=gene-C9F09_15390;Name=C9F09_15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15390;partial=true;start_range=.,1 PYKB01000933.1 Protein Homology CDS 1 265 . - 0 ID=cds-TGC89659.1;Parent=gene-C9F09_15390;Dbxref=NCBI_GP:TGC89659.1;Name=TGC89659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=C9F09_15390;partial=true;product=fimbrial protein;protein_id=TGC89659.1;start_range=.,1;transl_table=11 PYKB01000933.1 Genbank pseudogene 963 1170 . - . ID=gene-C9F09_15395;Name=C9F09_15395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15395;pseudo=true PYKB01000933.1 Protein Homology CDS 963 1170 . - 0 ID=cds-C9F09_15395;Parent=gene-C9F09_15395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532677.1;locus_tag=C9F09_15395;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000933.1 Genbank gene 1206 2806 . - . ID=gene-C9F09_15400;Name=C9F09_15400;end_range=2806,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15400;partial=true PYKB01000933.1 Protein Homology CDS 1206 2806 . - 2 ID=cds-TGC89660.1;Parent=gene-C9F09_15400;Dbxref=NCBI_GP:TGC89660.1;Name=TGC89660.1;end_range=2806,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=C9F09_15400;partial=true;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=TGC89660.1;transl_table=11 ##sequence-region PYKB01001485.1 1 2804 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001485.1 Genbank region 1 2804 . + . ID=PYKB01001485.1:1..2804;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001485.1 Genbank gene 1 209 . - . ID=gene-C9F09_25795;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=C9F09_25795;partial=true;start_range=.,1 PYKB01001485.1 Protein Homology CDS 1 209 . - 0 ID=cds-TGC77581.1;Parent=gene-C9F09_25795;Dbxref=NCBI_GP:TGC77581.1;Name=TGC77581.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=C9F09_25795;partial=true;product=HslU--HslV peptidase ATPase subunit;protein_id=TGC77581.1;start_range=.,1;transl_table=11 PYKB01001485.1 Genbank gene 219 749 . - . ID=gene-C9F09_25800;Name=C9F09_25800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25800 PYKB01001485.1 Protein Homology CDS 219 749 . - 0 ID=cds-TGC77582.1;Parent=gene-C9F09_25800;Dbxref=NCBI_GP:TGC77582.1;Name=TGC77582.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457544.1;locus_tag=C9F09_25800;product=HslU--HslV peptidase proteolytic subunit;protein_id=TGC77582.1;transl_table=11 PYKB01001485.1 Genbank gene 841 1827 . - . ID=gene-C9F09_25805;Name=C9F09_25805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25805 PYKB01001485.1 Protein Homology CDS 841 1827 . - 0 ID=cds-TGC77583.1;Parent=gene-C9F09_25805;Dbxref=NCBI_GP:TGC77583.1;Name=TGC77583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457959.1;locus_tag=C9F09_25805;product=cell division protein FtsN;protein_id=TGC77583.1;transl_table=11 PYKB01001485.1 Genbank gene 1921 2804 . - . ID=gene-C9F09_25810;Name=C9F09_25810;end_range=2804,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25810;partial=true PYKB01001485.1 Protein Homology CDS 1921 2804 . - 2 ID=cds-TGC77584.1;Parent=gene-C9F09_25810;Dbxref=NCBI_GP:TGC77584.1;Name=TGC77584.1;end_range=2804,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457958.1;locus_tag=C9F09_25810;partial=true;product=DNA-binding transcriptional regulator CytR;protein_id=TGC77584.1;transl_table=11 ##sequence-region PYKB01001721.1 1 2801 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001721.1 Genbank region 1 2801 . + . ID=PYKB01001721.1:1..2801;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001721.1 Genbank gene 1 2564 . - . ID=gene-C9F09_30180;Name=C9F09_30180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30180;partial=true;start_range=.,1 PYKB01001721.1 Protein Homology CDS 1 2564 . - 0 ID=cds-TGC71370.1;Parent=gene-C9F09_30180;Dbxref=NCBI_GP:TGC71370.1;Name=TGC71370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006839388.1;locus_tag=C9F09_30180;partial=true;product=Ig-like domain repeat protein;protein_id=TGC71370.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000723.1 1 2793 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000723.1 Genbank region 1 2793 . + . ID=PYKB01000723.1:1..2793;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000723.1 Genbank gene 1 297 . + . ID=gene-C9F09_11060;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=C9F09_11060;partial=true;start_range=.,1 PYKB01000723.1 Protein Homology CDS 1 297 . + 0 ID=cds-TGC93416.1;Parent=gene-C9F09_11060;Dbxref=NCBI_GP:TGC93416.1;Name=TGC93416.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455676.1;locus_tag=C9F09_11060;partial=true;product=flagellar hook-associated protein FlgK;protein_id=TGC93416.1;start_range=.,1;transl_table=11 PYKB01000723.1 Genbank gene 312 1265 . + . ID=gene-C9F09_11065;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=C9F09_11065 PYKB01000723.1 Protein Homology CDS 312 1265 . + 0 ID=cds-TGC93417.1;Parent=gene-C9F09_11065;Dbxref=NCBI_GP:TGC93417.1;Name=TGC93417.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes;gbkey=CDS;gene=flgL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455677.1;locus_tag=C9F09_11065;product=flagellar hook-filament junction protein FlgL;protein_id=TGC93417.1;transl_table=11 PYKB01000723.1 Genbank gene 1285 1479 . - . ID=gene-C9F09_11070;Name=C9F09_11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11070 PYKB01000723.1 Protein Homology CDS 1285 1479 . - 0 ID=cds-TGC93418.1;Parent=gene-C9F09_11070;Dbxref=NCBI_GP:TGC93418.1;Name=TGC93418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218942.1;locus_tag=C9F09_11070;product=hypothetical protein;protein_id=TGC93418.1;transl_table=11 PYKB01000723.1 Genbank pseudogene 1522 2715 . - . ID=gene-C9F09_11075;Name=rne;gbkey=Gene;gene=rne;gene_biotype=pseudogene;locus_tag=C9F09_11075;pseudo=true PYKB01000723.1 Protein Homology CDS 1522 2715 . - 0 ID=cds-C9F09_11075;Parent=gene-C9F09_11075;Note=bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein%3B forms part of the membrane-associated degradosome complex along with PNPase%2C RhlB%2C and enolase%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=rne;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455679.1;locus_tag=C9F09_11075;product=ribonuclease E;pseudo=true;transl_table=11 ##sequence-region PYKB01001713.1 1 2791 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001713.1 Genbank region 1 2791 . + . ID=PYKB01001713.1:1..2791;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001713.1 Genbank gene 1 356 . - . ID=gene-C9F09_29970;Name=C9F09_29970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29970;partial=true;start_range=.,1 PYKB01001713.1 Protein Homology CDS 1 356 . - 0 ID=cds-TGC71560.1;Parent=gene-C9F09_29970;Dbxref=NCBI_GP:TGC71560.1;Name=TGC71560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=C9F09_29970;partial=true;product=cobalamin biosynthesis protein CbiM;protein_id=TGC71560.1;start_range=.,1;transl_table=11 PYKB01001713.1 Genbank gene 353 1066 . - . ID=gene-C9F09_29975;Name=C9F09_29975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29975 PYKB01001713.1 Protein Homology CDS 353 1066 . - 0 ID=cds-TGC71561.1;Parent=gene-C9F09_29975;Dbxref=NCBI_GP:TGC71561.1;Name=TGC71561.1;Note=catalyzes the formation of precorrin-3A from precorrin-2;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456577.1;locus_tag=C9F09_29975;product=precorrin-2 C(20)-methyltransferase;protein_id=TGC71561.1;transl_table=11 PYKB01001713.1 Genbank gene 1063 1857 . - . ID=gene-C9F09_29980;Name=C9F09_29980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29980 PYKB01001713.1 Protein Homology CDS 1063 1857 . - 0 ID=cds-TGC71562.1;Parent=gene-C9F09_29980;Dbxref=NCBI_GP:TGC71562.1;Name=TGC71562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=C9F09_29980;product=sirohydrochlorin cobaltochelatase;protein_id=TGC71562.1;transl_table=11 PYKB01001713.1 Genbank gene 1860 2651 . - . ID=gene-C9F09_29985;Name=C9F09_29985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29985 PYKB01001713.1 Protein Homology CDS 1860 2651 . - 0 ID=cds-TGC71563.1;Parent=gene-C9F09_29985;Dbxref=NCBI_GP:TGC71563.1;Name=TGC71563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=C9F09_29985;product=cobalt-precorrin-6A reductase;protein_id=TGC71563.1;transl_table=11 PYKB01001713.1 Genbank pseudogene 2648 2791 . - . ID=gene-C9F09_29990;Name=cbiH;gbkey=Gene;gene=cbiH;gene_biotype=pseudogene;locus_tag=C9F09_29990;pseudo=true PYKB01001713.1 Protein Homology CDS 2648 2791 . - 0 ID=cds-C9F09_29990;Parent=gene-C9F09_29990;Note=catalyzes the formation of cobalt-precorrin-4 from cobalt-precorrin-3B%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=cbiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456578.1;locus_tag=C9F09_29990;product=cobalt-precorrin-3B C(17)-methyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKB01001519.1 1 2791 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001519.1 Genbank region 1 2791 . + . ID=PYKB01001519.1:1..2791;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001519.1 Genbank gene 1 372 . - . ID=gene-C9F09_26340;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=C9F09_26340;partial=true;start_range=.,1 PYKB01001519.1 Protein Homology CDS 1 372 . - 0 ID=cds-TGC76786.1;Parent=gene-C9F09_26340;Dbxref=NCBI_GP:TGC76786.1;Name=TGC76786.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=C9F09_26340;partial=true;product=penicillin-binding protein activator LpoB;protein_id=TGC76786.1;start_range=.,1;transl_table=11 PYKB01001519.1 Genbank gene 386 760 . - . ID=gene-C9F09_26345;Name=C9F09_26345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26345 PYKB01001519.1 Protein Homology CDS 386 760 . - 0 ID=cds-TGC76787.1;Parent=gene-C9F09_26345;Dbxref=NCBI_GP:TGC76787.1;Name=TGC76787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=C9F09_26345;product=DUF1425 domain-containing protein;protein_id=TGC76787.1;transl_table=11 PYKB01001519.1 Genbank gene 763 1122 . - . ID=gene-C9F09_26350;Name=C9F09_26350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26350 PYKB01001519.1 Protein Homology CDS 763 1122 . - 0 ID=cds-TGC76788.1;Parent=gene-C9F09_26350;Dbxref=NCBI_GP:TGC76788.1;Name=TGC76788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455697.1;locus_tag=C9F09_26350;product=histidine triad nucleotide-binding protein;protein_id=TGC76788.1;transl_table=11 PYKB01001519.1 Genbank gene 1464 2791 . + . ID=gene-C9F09_26355;Name=C9F09_26355;end_range=2791,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26355;partial=true PYKB01001519.1 Protein Homology CDS 1464 2791 . + 0 ID=cds-TGC76789.1;Parent=gene-C9F09_26355;Dbxref=NCBI_GP:TGC76789.1;Name=TGC76789.1;end_range=2791,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=C9F09_26355;partial=true;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=TGC76789.1;transl_table=11 ##sequence-region PYKB01001195.1 1 2787 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001195.1 Genbank region 1 2787 . + . ID=PYKB01001195.1:1..2787;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001195.1 Genbank gene 1 325 . + . ID=gene-C9F09_20360;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=C9F09_20360;partial=true;start_range=.,1 PYKB01001195.1 Protein Homology CDS 1 325 . + 1 ID=cds-TGC83635.1;Parent=gene-C9F09_20360;Dbxref=NCBI_GP:TGC83635.1;Name=TGC83635.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=C9F09_20360;partial=true;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=TGC83635.1;start_range=.,1;transl_table=11 PYKB01001195.1 Genbank gene 508 1695 . + . ID=gene-C9F09_20365;Name=C9F09_20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20365 PYKB01001195.1 Protein Homology CDS 508 1695 . + 0 ID=cds-TGC83636.1;Parent=gene-C9F09_20365;Dbxref=NCBI_GP:TGC83636.1;Name=TGC83636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458099.1;locus_tag=C9F09_20365;product=multidrug transporter MdtL;protein_id=TGC83636.1;transl_table=11 PYKB01001195.1 Genbank gene 1664 2623 . + . ID=gene-C9F09_20370;Name=C9F09_20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20370 PYKB01001195.1 Protein Homology CDS 1664 2623 . + 0 ID=cds-TGC83637.1;Parent=gene-C9F09_20370;Dbxref=NCBI_GP:TGC83637.1;Name=TGC83637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=C9F09_20370;product=HTH-type transcriptional regulator YidZ;protein_id=TGC83637.1;transl_table=11 ##sequence-region PYKB01000925.1 1 2782 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000925.1 Genbank region 1 2782 . + . ID=PYKB01000925.1:1..2782;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000925.1 Genbank gene 1 539 . + . ID=gene-C9F09_15255;Name=C9F09_15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15255;partial=true;start_range=.,1 PYKB01000925.1 Protein Homology CDS 1 539 . + 2 ID=cds-TGC89762.1;Parent=gene-C9F09_15255;Dbxref=NCBI_GP:TGC89762.1;Name=TGC89762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456494.1;locus_tag=C9F09_15255;partial=true;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=TGC89762.1;start_range=.,1;transl_table=11 PYKB01000925.1 Genbank gene 536 964 . - . ID=gene-C9F09_15260;Name=C9F09_15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15260 PYKB01000925.1 Protein Homology CDS 536 964 . - 0 ID=cds-TGC89763.1;Parent=gene-C9F09_15260;Dbxref=NCBI_GP:TGC89763.1;Name=TGC89763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=C9F09_15260;product=universal stress protein UspC;protein_id=TGC89763.1;transl_table=11 PYKB01000925.1 Genbank gene 961 1077 . - . ID=gene-C9F09_15265;Name=C9F09_15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15265 PYKB01000925.1 Protein Homology CDS 961 1077 . - 0 ID=cds-TGC89764.1;Parent=gene-C9F09_15265;Dbxref=NCBI_GP:TGC89764.1;Name=TGC89764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=C9F09_15265;product=hypothetical protein;protein_id=TGC89764.1;transl_table=11 PYKB01000925.1 Genbank gene 1751 2101 . + . ID=gene-C9F09_15270;Name=C9F09_15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15270 PYKB01000925.1 Protein Homology CDS 1751 2101 . + 0 ID=cds-TGC89765.1;Parent=gene-C9F09_15270;Dbxref=NCBI_GP:TGC89765.1;Name=TGC89765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456491.1;locus_tag=C9F09_15270;product=flagellar transcriptional regulator FlhD;protein_id=TGC89765.1;transl_table=11 PYKB01000925.1 Genbank gene 2098 2682 . + . ID=gene-C9F09_15275;Name=C9F09_15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15275 PYKB01000925.1 Protein Homology CDS 2098 2682 . + 0 ID=cds-TGC89766.1;Parent=gene-C9F09_15275;Dbxref=NCBI_GP:TGC89766.1;Name=TGC89766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=C9F09_15275;product=flagellar transcriptional regulator FlhC;protein_id=TGC89766.1;transl_table=11 ##sequence-region PYKB01000749.1 1 10159 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000749.1 Genbank region 1 10159 . + . ID=PYKB01000749.1:1..10159;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000749.1 Genbank pseudogene 88 1581 . - . ID=gene-C9F09_11520;Name=C9F09_11520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11520;pseudo=true PYKB01000749.1 Protein Homology CDS 88 1581 . - 0 ID=cds-C9F09_11520;Parent=gene-C9F09_11520;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456328.1;locus_tag=C9F09_11520;product=ATP-dependent helicase;pseudo=true;transl_table=11 PYKB01000749.1 Genbank gene 1712 2056 . + . ID=gene-C9F09_11525;Name=C9F09_11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11525 PYKB01000749.1 Protein Homology CDS 1712 2056 . + 0 ID=cds-TGC92931.1;Parent=gene-C9F09_11525;Dbxref=NCBI_GP:TGC92931.1;Name=TGC92931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=C9F09_11525;product=RidA family protein;protein_id=TGC92931.1;transl_table=11 PYKB01000749.1 Genbank gene 2062 2241 . - . ID=gene-C9F09_11530;Name=C9F09_11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11530 PYKB01000749.1 Protein Homology CDS 2062 2241 . - 0 ID=cds-TGC92932.1;Parent=gene-C9F09_11530;Dbxref=NCBI_GP:TGC92932.1;Name=TGC92932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456330.1;locus_tag=C9F09_11530;product=YoaH family protein;protein_id=TGC92932.1;transl_table=11 PYKB01000749.1 Genbank gene 2322 3686 . + . ID=gene-C9F09_11535;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=C9F09_11535 PYKB01000749.1 Protein Homology CDS 2322 3686 . + 0 ID=cds-TGC92933.1;Parent=gene-C9F09_11535;Dbxref=NCBI_GP:TGC92933.1;Name=TGC92933.1;Note=para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine;gbkey=CDS;gene=pabB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456331.1;locus_tag=C9F09_11535;product=aminodeoxychorismate synthase component 1;protein_id=TGC92933.1;transl_table=11 PYKB01000749.1 Genbank gene 3690 4268 . + . ID=gene-C9F09_11540;Name=C9F09_11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11540 PYKB01000749.1 Protein Homology CDS 3690 4268 . + 0 ID=cds-TGC92934.1;Parent=gene-C9F09_11540;Dbxref=NCBI_GP:TGC92934.1;Name=TGC92934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456332.1;locus_tag=C9F09_11540;product=coenzyme A pyrophosphatase;protein_id=TGC92934.1;transl_table=11 PYKB01000749.1 Genbank gene 4532 5896 . + . ID=gene-C9F09_11545;Name=C9F09_11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11545 PYKB01000749.1 Protein Homology CDS 4532 5896 . + 0 ID=cds-TGC92935.1;Parent=gene-C9F09_11545;Dbxref=NCBI_GP:TGC92935.1;Name=TGC92935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=C9F09_11545;product=L-serine ammonia-lyase;protein_id=TGC92935.1;transl_table=11 PYKB01000749.1 Genbank gene 6034 7635 . + . ID=gene-C9F09_11550;Name=C9F09_11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11550 PYKB01000749.1 Protein Homology CDS 6034 7635 . + 0 ID=cds-TGC92936.1;Parent=gene-C9F09_11550;Dbxref=NCBI_GP:TGC92936.1;Name=TGC92936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456334.1;locus_tag=C9F09_11550;product=cyclic diguanylate phosphodiesterase;protein_id=TGC92936.1;transl_table=11 PYKB01000749.1 Genbank gene 7657 9216 . - . ID=gene-C9F09_11555;Name=C9F09_11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11555 PYKB01000749.1 Protein Homology CDS 7657 9216 . - 0 ID=cds-TGC92937.1;Parent=gene-C9F09_11555;Dbxref=NCBI_GP:TGC92937.1;Name=TGC92937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=C9F09_11555;product=hypothetical protein;protein_id=TGC92937.1;transl_table=11 PYKB01000749.1 Genbank gene 9204 9539 . - . ID=gene-C9F09_11560;Name=C9F09_11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11560 PYKB01000749.1 Protein Homology CDS 9204 9539 . - 0 ID=cds-TGC92938.1;Parent=gene-C9F09_11560;Dbxref=NCBI_GP:TGC92938.1;Name=TGC92938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460785.1;locus_tag=C9F09_11560;product=hypothetical protein;protein_id=TGC92938.1;transl_table=11 PYKB01000749.1 Genbank gene 9689 10159 . + . ID=gene-C9F09_11565;Name=C9F09_11565;end_range=10159,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11565;partial=true PYKB01000749.1 Protein Homology CDS 9689 10159 . + 0 ID=cds-TGC92939.1;Parent=gene-C9F09_11565;Dbxref=NCBI_GP:TGC92939.1;Name=TGC92939.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate;end_range=10159,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=C9F09_11565;partial=true;product=PTS mannose transporter subunit IIAB;protein_id=TGC92939.1;transl_table=11 ##sequence-region PYKB01001037.1 1 18039 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001037.1 Genbank region 1 18039 . + . ID=PYKB01001037.1:1..18039;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001037.1 Genbank pseudogene 54 452 . - . ID=gene-C9F09_17290;Name=C9F09_17290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17290;pseudo=true PYKB01001037.1 Protein Homology CDS 54 452 . - 0 ID=cds-C9F09_17290;Parent=gene-C9F09_17290;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454943.1;locus_tag=C9F09_17290;product=cyclic diguanylate phosphodiesterase;pseudo=true;transl_table=11 PYKB01001037.1 Genbank gene 754 957 . - . ID=gene-C9F09_17295;Name=C9F09_17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17295 PYKB01001037.1 GeneMarkS+ CDS 754 957 . - 0 ID=cds-TGC87397.1;Parent=gene-C9F09_17295;Dbxref=NCBI_GP:TGC87397.1;Name=TGC87397.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_17295;product=hypothetical protein;protein_id=TGC87397.1;transl_table=11 PYKB01001037.1 Genbank pseudogene 954 1254 . - . ID=gene-C9F09_17300;Name=C9F09_17300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17300;pseudo=true PYKB01001037.1 Protein Homology CDS 954 1254 . - 0 ID=cds-C9F09_17300;Parent=gene-C9F09_17300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=C9F09_17300;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001037.1 Genbank gene 1227 1991 . - . ID=gene-C9F09_17305;Name=C9F09_17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17305 PYKB01001037.1 Protein Homology CDS 1227 1991 . - 0 ID=cds-TGC87398.1;Parent=gene-C9F09_17305;Dbxref=NCBI_GP:TGC87398.1;Name=TGC87398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459336.1;locus_tag=C9F09_17305;product=hypothetical protein;protein_id=TGC87398.1;transl_table=11 PYKB01001037.1 Genbank gene 2307 2522 . + . ID=gene-C9F09_17310;Name=C9F09_17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17310 PYKB01001037.1 Protein Homology CDS 2307 2522 . + 0 ID=cds-TGC87399.1;Parent=gene-C9F09_17310;Dbxref=NCBI_GP:TGC87399.1;Name=TGC87399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535457.1;locus_tag=C9F09_17310;product=hypothetical protein;protein_id=TGC87399.1;transl_table=11 PYKB01001037.1 Genbank gene 2625 3161 . + . ID=gene-C9F09_17315;Name=C9F09_17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17315 PYKB01001037.1 Protein Homology CDS 2625 3161 . + 0 ID=cds-TGC87400.1;Parent=gene-C9F09_17315;Dbxref=NCBI_GP:TGC87400.1;Name=TGC87400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=C9F09_17315;product=type 1 fimbrial protein;protein_id=TGC87400.1;transl_table=11 PYKB01001037.1 Genbank gene 3223 3984 . + . ID=gene-C9F09_17320;Name=C9F09_17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17320 PYKB01001037.1 Protein Homology CDS 3223 3984 . + 0 ID=cds-TGC87401.1;Parent=gene-C9F09_17320;Dbxref=NCBI_GP:TGC87401.1;Name=TGC87401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454939.1;locus_tag=C9F09_17320;product=fimbrial chaperone protein StbB;protein_id=TGC87401.1;transl_table=11 PYKB01001037.1 Genbank gene 3968 6529 . + . ID=gene-C9F09_17325;Name=C9F09_17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17325 PYKB01001037.1 Protein Homology CDS 3968 6529 . + 0 ID=cds-TGC87402.1;Parent=gene-C9F09_17325;Dbxref=NCBI_GP:TGC87402.1;Name=TGC87402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=C9F09_17325;product=fimbrial assembly protein;protein_id=TGC87402.1;transl_table=11 PYKB01001037.1 Genbank gene 6534 7859 . + . ID=gene-C9F09_17330;Name=C9F09_17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17330 PYKB01001037.1 Protein Homology CDS 6534 7859 . + 0 ID=cds-TGC87403.1;Parent=gene-C9F09_17330;Dbxref=NCBI_GP:TGC87403.1;Name=TGC87403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=C9F09_17330;product=fimbrial protein;protein_id=TGC87403.1;transl_table=11 PYKB01001037.1 Genbank gene 7825 8583 . + . ID=gene-C9F09_17335;Name=C9F09_17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17335 PYKB01001037.1 Protein Homology CDS 7825 8583 . + 0 ID=cds-TGC87404.1;Parent=gene-C9F09_17335;Dbxref=NCBI_GP:TGC87404.1;Name=TGC87404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=C9F09_17335;product=fimbrial assembly protein;protein_id=TGC87404.1;transl_table=11 PYKB01001037.1 Genbank gene 8630 9028 . - . ID=gene-C9F09_17340;Name=C9F09_17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17340 PYKB01001037.1 Protein Homology CDS 8630 9028 . - 0 ID=cds-TGC87405.1;Parent=gene-C9F09_17340;Dbxref=NCBI_GP:TGC87405.1;Name=TGC87405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=C9F09_17340;product=hypothetical protein;protein_id=TGC87405.1;transl_table=11 PYKB01001037.1 Genbank gene 9719 9991 . + . ID=gene-C9F09_17345;Name=C9F09_17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17345 PYKB01001037.1 Protein Homology CDS 9719 9991 . + 0 ID=cds-TGC87406.1;Parent=gene-C9F09_17345;Dbxref=NCBI_GP:TGC87406.1;Name=TGC87406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459329.1;locus_tag=C9F09_17345;product=cytoplasmic protein;protein_id=TGC87406.1;transl_table=11 PYKB01001037.1 Genbank gene 9936 10901 . - . ID=gene-C9F09_17350;Name=C9F09_17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17350 PYKB01001037.1 Protein Homology CDS 9936 10901 . - 0 ID=cds-TGC87407.1;Parent=gene-C9F09_17350;Dbxref=NCBI_GP:TGC87407.1;Name=TGC87407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459328.1;locus_tag=C9F09_17350;product=LysR family transcriptional regulator;protein_id=TGC87407.1;transl_table=11 PYKB01001037.1 Genbank gene 10935 11849 . - . ID=gene-C9F09_17355;Name=C9F09_17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17355 PYKB01001037.1 Protein Homology CDS 10935 11849 . - 0 ID=cds-TGC87408.1;Parent=gene-C9F09_17355;Dbxref=NCBI_GP:TGC87408.1;Name=TGC87408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459327.1;locus_tag=C9F09_17355;product=alpha/beta hydrolase;protein_id=TGC87408.1;transl_table=11 PYKB01001037.1 Genbank pseudogene 11849 12727 . - . ID=gene-C9F09_17360;Name=C9F09_17360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17360;pseudo=true PYKB01001037.1 Protein Homology CDS 11849 12727 . - 0 ID=cds-C9F09_17360;Parent=gene-C9F09_17360;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459326.1;locus_tag=C9F09_17360;product=5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase;pseudo=true;transl_table=11 PYKB01001037.1 Genbank gene 12742 13368 . - . ID=gene-C9F09_17365;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=C9F09_17365 PYKB01001037.1 Protein Homology CDS 12742 13368 . - 0 ID=cds-TGC87409.1;Parent=gene-C9F09_17365;Dbxref=NCBI_GP:TGC87409.1;Name=TGC87409.1;gbkey=CDS;gene=leuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459325.1;locus_tag=C9F09_17365;product=3-isopropylmalate dehydratase small subunit;protein_id=TGC87409.1;transl_table=11 PYKB01001037.1 Genbank gene 13370 14791 . - . ID=gene-C9F09_17370;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=C9F09_17370 PYKB01001037.1 Protein Homology CDS 13370 14791 . - 0 ID=cds-TGC87410.1;Parent=gene-C9F09_17370;Dbxref=NCBI_GP:TGC87410.1;Name=TGC87410.1;gbkey=CDS;gene=leuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459324.1;locus_tag=C9F09_17370;product=3-isopropylmalate dehydratase large subunit;protein_id=TGC87410.1;transl_table=11 PYKB01001037.1 Genbank gene 14923 16161 . - . ID=gene-C9F09_17375;Name=C9F09_17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17375 PYKB01001037.1 Protein Homology CDS 14923 16161 . - 0 ID=cds-TGC87412.1;Parent=gene-C9F09_17375;Dbxref=NCBI_GP:TGC87412.1;Name=TGC87412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459323.3;locus_tag=C9F09_17375;product=MFS transporter;protein_id=TGC87412.1;transl_table=11 PYKB01001037.1 Genbank gene 16502 16825 . - . ID=gene-C9F09_17380;Name=C9F09_17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17380 PYKB01001037.1 Protein Homology CDS 16502 16825 . - 0 ID=cds-TGC87411.1;Parent=gene-C9F09_17380;Dbxref=NCBI_GP:TGC87411.1;Name=TGC87411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459322.1;locus_tag=C9F09_17380;product=DUF1889 domain-containing protein;protein_id=TGC87411.1;transl_table=11 PYKB01001037.1 Genbank pseudogene 16935 17649 . - . ID=gene-C9F09_17385;Name=C9F09_17385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17385;pseudo=true PYKB01001037.1 Protein Homology CDS 16935 17649 . - 0 ID=cds-C9F09_17385;Parent=gene-C9F09_17385;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003828496.1;locus_tag=C9F09_17385;product=diol dehydratase reactivase subunit alpha;pseudo=true;transl_table=11 PYKB01001037.1 Genbank pseudogene 17651 18039 . + . ID=gene-C9F09_17390;Name=C9F09_17390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17390;pseudo=true PYKB01001037.1 Protein Homology CDS 17651 18039 . + 0 ID=cds-C9F09_17390;Parent=gene-C9F09_17390;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=C9F09_17390;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region PYKB01001262.1 1 2782 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001262.1 Genbank region 1 2782 . + . ID=PYKB01001262.1:1..2782;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001262.1 Genbank gene 1 1938 . - . ID=gene-C9F09_21555;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=C9F09_21555;partial=true;start_range=.,1 PYKB01001262.1 Protein Homology CDS 1 1938 . - 0 ID=cds-TGC82268.1;Parent=gene-C9F09_21555;Dbxref=NCBI_GP:TGC82268.1;Name=TGC82268.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=C9F09_21555;partial=true;product=SPI-1 type III secretion system effector HECT-type E3 ubiquitin transferase SopA;protein_id=TGC82268.1;start_range=.,1;transl_table=11 PYKB01001262.1 Genbank gene 1868 2110 . + . ID=gene-C9F09_21560;Name=C9F09_21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21560 PYKB01001262.1 Protein Homology CDS 1868 2110 . + 0 ID=cds-TGC82269.1;Parent=gene-C9F09_21560;Dbxref=NCBI_GP:TGC82269.1;Name=TGC82269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000242993.1;locus_tag=C9F09_21560;product=hypothetical protein;protein_id=TGC82269.1;transl_table=11 PYKB01001262.1 Genbank pseudogene 2205 2297 . + . ID=gene-C9F09_21565;Name=C9F09_21565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21565;pseudo=true PYKB01001262.1 Protein Homology CDS 2205 2297 . + 0 ID=cds-C9F09_21565;Parent=gene-C9F09_21565;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455420.1;locus_tag=C9F09_21565;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001262.1 Genbank gene 2557 2782 . + . ID=gene-C9F09_21570;Name=C9F09_21570;end_range=2782,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21570;partial=true PYKB01001262.1 Protein Homology CDS 2557 2782 . + 0 ID=cds-TGC82267.1;Parent=gene-C9F09_21570;Dbxref=NCBI_GP:TGC82267.1;Name=TGC82267.1;end_range=2782,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456613.1;locus_tag=C9F09_21570;partial=true;product=thiosulfate reductase;protein_id=TGC82267.1;transl_table=11 ##sequence-region PYKB01001395.1 1 2773 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001395.1 Genbank region 1 2773 . + . ID=PYKB01001395.1:1..2773;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001395.1 Genbank gene 1 150 . - . ID=gene-C9F09_23960;Name=C9F09_23960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23960;partial=true;start_range=.,1 PYKB01001395.1 Protein Homology CDS 1 150 . - 0 ID=cds-TGC79582.1;Parent=gene-C9F09_23960;Dbxref=NCBI_GP:TGC79582.1;Name=TGC79582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456091.1;locus_tag=C9F09_23960;partial=true;product=oxidoreductase;protein_id=TGC79582.1;start_range=.,1;transl_table=11 PYKB01001395.1 Genbank gene 201 440 . - . ID=gene-C9F09_23965;Name=C9F09_23965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23965 PYKB01001395.1 Protein Homology CDS 201 440 . - 0 ID=cds-TGC79583.1;Parent=gene-C9F09_23965;Dbxref=NCBI_GP:TGC79583.1;Name=TGC79583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456092.1;locus_tag=C9F09_23965;product=DUF1289 domain-containing protein;protein_id=TGC79583.1;transl_table=11 PYKB01001395.1 Genbank gene 543 1142 . + . ID=gene-C9F09_23970;Name=C9F09_23970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23970 PYKB01001395.1 Protein Homology CDS 543 1142 . + 0 ID=cds-TGC79584.1;Parent=gene-C9F09_23970;Dbxref=NCBI_GP:TGC79584.1;Name=TGC79584.1;Note=represses nemA which is involved in degradation of N-ethylmaleimide;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456093.1;locus_tag=C9F09_23970;product=TetR/AcrR family transcriptional regulator;protein_id=TGC79584.1;transl_table=11 PYKB01001395.1 Genbank gene 1201 2298 . + . ID=gene-C9F09_23975;Name=C9F09_23975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23975 PYKB01001395.1 Protein Homology CDS 1201 2298 . + 0 ID=cds-TGC79585.1;Parent=gene-C9F09_23975;Dbxref=NCBI_GP:TGC79585.1;Name=TGC79585.1;Note=FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456094.1;locus_tag=C9F09_23975;product=alkene reductase;protein_id=TGC79585.1;transl_table=11 PYKB01001395.1 Genbank gene 2367 2773 . + . ID=gene-C9F09_23980;Name=C9F09_23980;end_range=2773,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23980;partial=true PYKB01001395.1 Protein Homology CDS 2367 2773 . + 0 ID=cds-TGC79586.1;Parent=gene-C9F09_23980;Dbxref=NCBI_GP:TGC79586.1;Name=TGC79586.1;end_range=2773,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=C9F09_23980;partial=true;product=lactoylglutathione lyase;protein_id=TGC79586.1;transl_table=11 ##sequence-region PYKB01000282.1 1 2772 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000282.1 Genbank region 1 2772 . + . ID=PYKB01000282.1:1..2772;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000282.1 Genbank gene 1 870 . - . ID=gene-C9F09_03235;Name=C9F09_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03235;partial=true;start_range=.,1 PYKB01000282.1 Protein Homology CDS 1 870 . - 0 ID=cds-TGD01708.1;Parent=gene-C9F09_03235;Dbxref=NCBI_GP:TGD01708.1;Name=TGD01708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455075.1;locus_tag=C9F09_03235;partial=true;product=hypothetical protein;protein_id=TGD01708.1;start_range=.,1;transl_table=11 PYKB01000282.1 Genbank gene 989 1642 . - . ID=gene-C9F09_03240;Name=C9F09_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03240 PYKB01000282.1 Protein Homology CDS 989 1642 . - 0 ID=cds-TGD01709.1;Parent=gene-C9F09_03240;Dbxref=NCBI_GP:TGD01709.1;Name=TGD01709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455074.1;locus_tag=C9F09_03240;product=DNA-binding transcriptional repressor AcrR;protein_id=TGD01709.1;transl_table=11 PYKB01000282.1 Genbank gene 1784 2772 . + . ID=gene-C9F09_03245;Name=C9F09_03245;end_range=2772,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03245;partial=true PYKB01000282.1 Protein Homology CDS 1784 2772 . + 0 ID=cds-TGD01710.1;Parent=gene-C9F09_03245;Dbxref=NCBI_GP:TGD01710.1;Name=TGD01710.1;Note=with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics;end_range=2772,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=C9F09_03245;partial=true;product=efflux transporter periplasmic adaptor subunit;protein_id=TGD01710.1;transl_table=11 ##sequence-region PYKB01000114.1 1 2771 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000114.1 Genbank region 1 2771 . + . ID=PYKB01000114.1:1..2771;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000114.1 Genbank pseudogene 1 480 . - . ID=gene-C9F09_01270;Name=C9F09_01270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01270;pseudo=true PYKB01000114.1 Protein Homology CDS 1 480 . - 0 ID=cds-C9F09_01270;Parent=gene-C9F09_01270;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456170.1;locus_tag=C9F09_01270;product=glutathione peroxidase;pseudo=true;transl_table=11 PYKB01000114.1 Genbank gene 572 1552 . - . ID=gene-C9F09_01275;Name=C9F09_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01275 PYKB01000114.1 Protein Homology CDS 572 1552 . - 0 ID=cds-TGD05182.1;Parent=gene-C9F09_01275;Dbxref=NCBI_GP:TGD05182.1;Name=TGD05182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456171.1;locus_tag=C9F09_01275;product=vitamin B12 import system permease BtuC;protein_id=TGD05182.1;transl_table=11 PYKB01000114.1 Genbank gene 1755 2054 . - . ID=gene-C9F09_01280;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=C9F09_01280 PYKB01000114.1 Protein Homology CDS 1755 2054 . - 0 ID=cds-TGD05183.1;Parent=gene-C9F09_01280;Dbxref=NCBI_GP:TGD05183.1;Name=TGD05183.1;gbkey=CDS;gene=ihfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456172.1;locus_tag=C9F09_01280;product=integration host factor subunit alpha;protein_id=TGD05183.1;transl_table=11 PYKB01000114.1 Genbank gene 2059 2771 . - . ID=gene-C9F09_01285;Name=pheT;end_range=2771,.;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=C9F09_01285;partial=true PYKB01000114.1 Protein Homology CDS 2059 2771 . - 2 ID=cds-TGD05184.1;Parent=gene-C9F09_01285;Dbxref=NCBI_GP:TGD05184.1;Name=TGD05184.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;end_range=2771,.;gbkey=CDS;gene=pheT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012905611.1;locus_tag=C9F09_01285;partial=true;product=phenylalanine--tRNA ligase subunit beta;protein_id=TGD05184.1;transl_table=11 ##sequence-region PYKB01000275.1 1 2771 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000275.1 Genbank region 1 2771 . + . ID=PYKB01000275.1:1..2771;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000275.1 Genbank gene 1 219 . - . ID=gene-C9F09_03105;Name=C9F09_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03105;partial=true;start_range=.,1 PYKB01000275.1 Protein Homology CDS 1 219 . - 0 ID=cds-TGD01905.1;Parent=gene-C9F09_03105;Dbxref=NCBI_GP:TGD01905.1;Name=TGD01905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459535.1;locus_tag=C9F09_03105;partial=true;product=hypothetical protein;protein_id=TGD01905.1;start_range=.,1;transl_table=11 PYKB01000275.1 Genbank gene 340 552 . - . ID=gene-C9F09_03110;Name=C9F09_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03110 PYKB01000275.1 Protein Homology CDS 340 552 . - 0 ID=cds-TGD01901.1;Parent=gene-C9F09_03110;Dbxref=NCBI_GP:TGD01901.1;Name=TGD01901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455131.1;locus_tag=C9F09_03110;product=ribosome-associated protein;protein_id=TGD01901.1;transl_table=11 PYKB01000275.1 Genbank gene 554 1420 . - . ID=gene-C9F09_03115;Name=C9F09_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03115 PYKB01000275.1 Protein Homology CDS 554 1420 . - 0 ID=cds-TGD01902.1;Parent=gene-C9F09_03115;Dbxref=NCBI_GP:TGD01902.1;Name=TGD01902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=C9F09_03115;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=TGD01902.1;transl_table=11 PYKB01000275.1 Genbank gene 1783 1977 . + . ID=gene-C9F09_03120;Name=C9F09_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03120 PYKB01000275.1 Protein Homology CDS 1783 1977 . + 0 ID=cds-TGD01903.1;Parent=gene-C9F09_03120;Dbxref=NCBI_GP:TGD01903.1;Name=TGD01903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663608.1;locus_tag=C9F09_03120;product=hypothetical protein;protein_id=TGD01903.1;transl_table=11 PYKB01000275.1 Genbank gene 1967 2524 . + . ID=gene-C9F09_03125;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=C9F09_03125 PYKB01000275.1 Protein Homology CDS 1967 2524 . + 0 ID=cds-TGD01904.1;Parent=gene-C9F09_03125;Dbxref=NCBI_GP:TGD01904.1;Name=TGD01904.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455133.1;locus_tag=C9F09_03125;product=type 1 fimbrial protein subunit FimA;protein_id=TGD01904.1;transl_table=11 PYKB01000275.1 Genbank gene 2599 2771 . + . ID=gene-C9F09_03130;Name=C9F09_03130;end_range=2771,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03130;partial=true PYKB01000275.1 Protein Homology CDS 2599 2771 . + 0 ID=cds-TGD01906.1;Parent=gene-C9F09_03130;Dbxref=NCBI_GP:TGD01906.1;Name=TGD01906.1;end_range=2771,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=C9F09_03130;partial=true;product=type 1 fimbrial protein subunit FimI;protein_id=TGD01906.1;transl_table=11 ##sequence-region PYKB01001414.1 1 2764 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001414.1 Genbank region 1 2764 . + . ID=PYKB01001414.1:1..2764;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001414.1 Genbank gene 1 1761 . - . ID=gene-C9F09_24325;Name=C9F09_24325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24325;partial=true;start_range=.,1 PYKB01001414.1 Protein Homology CDS 1 1761 . - 0 ID=cds-TGC79152.1;Parent=gene-C9F09_24325;Dbxref=NCBI_GP:TGC79152.1;Name=TGC79152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455480.1;locus_tag=C9F09_24325;partial=true;product=chromosome partition protein MukB;protein_id=TGC79152.1;start_range=.,1;transl_table=11 PYKB01001414.1 Genbank gene 1761 2465 . - . ID=gene-C9F09_24330;Name=C9F09_24330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24330 PYKB01001414.1 Protein Homology CDS 1761 2465 . - 0 ID=cds-TGC79153.1;Parent=gene-C9F09_24330;Dbxref=NCBI_GP:TGC79153.1;Name=TGC79153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=C9F09_24330;product=chromosome partition protein MukE;protein_id=TGC79153.1;transl_table=11 PYKB01001414.1 Genbank gene 2446 2764 . - . ID=gene-C9F09_24335;Name=C9F09_24335;end_range=2764,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24335;partial=true PYKB01001414.1 Protein Homology CDS 2446 2764 . - 1 ID=cds-TGC79154.1;Parent=gene-C9F09_24335;Dbxref=NCBI_GP:TGC79154.1;Name=TGC79154.1;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;end_range=2764,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=C9F09_24335;partial=true;product=condensin subunit MukF;protein_id=TGC79154.1;transl_table=11 ##sequence-region PYKB01000696.1 1 2761 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000696.1 Genbank region 1 2761 . + . ID=PYKB01000696.1:1..2761;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000696.1 Genbank gene 1 362 . - . ID=gene-C9F09_10595;Name=C9F09_10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10595;partial=true;start_range=.,1 PYKB01000696.1 Protein Homology CDS 1 362 . - 0 ID=cds-TGC93764.1;Parent=gene-C9F09_10595;Dbxref=NCBI_GP:TGC93764.1;Name=TGC93764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=C9F09_10595;partial=true;product=cation transporter;protein_id=TGC93764.1;start_range=.,1;transl_table=11 PYKB01000696.1 Genbank gene 573 1238 . - . ID=gene-C9F09_10600;Name=C9F09_10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10600 PYKB01000696.1 Protein Homology CDS 573 1238 . - 0 ID=cds-TGC93761.1;Parent=gene-C9F09_10600;Dbxref=NCBI_GP:TGC93761.1;Name=TGC93761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=C9F09_10600;product=GntR family transcriptional regulator;protein_id=TGC93761.1;transl_table=11 PYKB01000696.1 Genbank gene 1225 1854 . - . ID=gene-C9F09_10605;Name=C9F09_10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10605 PYKB01000696.1 Protein Homology CDS 1225 1854 . - 0 ID=cds-TGC93762.1;Parent=gene-C9F09_10605;Dbxref=NCBI_GP:TGC93762.1;Name=TGC93762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=C9F09_10605;product=GntR family transcriptional regulator;protein_id=TGC93762.1;transl_table=11 PYKB01000696.1 Genbank gene 1974 2761 . - . ID=gene-C9F09_10610;Name=C9F09_10610;end_range=2761,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10610;partial=true PYKB01000696.1 Protein Homology CDS 1974 2761 . - 2 ID=cds-TGC93763.1;Parent=gene-C9F09_10610;Dbxref=NCBI_GP:TGC93763.1;Name=TGC93763.1;end_range=2761,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=C9F09_10610;partial=true;product=malate dehydrogenase;protein_id=TGC93763.1;transl_table=11 ##sequence-region PYKB01000602.1 1 2760 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000602.1 Genbank region 1 2760 . + . ID=PYKB01000602.1:1..2760;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000602.1 Genbank gene 1 329 . + . ID=gene-C9F09_08820;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=C9F09_08820;partial=true;start_range=.,1 PYKB01000602.1 Protein Homology CDS 1 329 . + 2 ID=cds-TGC95287.1;Parent=gene-C9F09_08820;Dbxref=NCBI_GP:TGC95287.1;Name=TGC95287.1;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454823.1;locus_tag=C9F09_08820;partial=true;product=30S ribosomal protein S2;protein_id=TGC95287.1;start_range=.,1;transl_table=11 PYKB01000602.1 Genbank pseudogene 281 567 . - . ID=gene-C9F09_08825;Name=C9F09_08825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08825;pseudo=true PYKB01000602.1 Protein Homology CDS 281 567 . - 0 ID=cds-C9F09_08825;Parent=gene-C9F09_08825;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001408260.1;locus_tag=C9F09_08825;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000602.1 Genbank pseudogene 587 1438 . + . ID=gene-C9F09_08830;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=pseudogene;locus_tag=C9F09_08830;pseudo=true PYKB01000602.1 Protein Homology CDS 587 1438 . + 0 ID=cds-C9F09_08830;Parent=gene-C9F09_08830;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu%3B internal stop;gbkey=CDS;gene=tsf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=C9F09_08830;product=elongation factor Ts;pseudo=true;transl_table=11 PYKB01000602.1 Genbank gene 1583 2308 . + . ID=gene-C9F09_08835;Name=C9F09_08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08835 PYKB01000602.1 Protein Homology CDS 1583 2308 . + 0 ID=cds-TGC95288.1;Parent=gene-C9F09_08835;Dbxref=NCBI_GP:TGC95288.1;Name=TGC95288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=C9F09_08835;product=UMP kinase;protein_id=TGC95288.1;transl_table=11 PYKB01000602.1 Genbank gene 2455 2760 . + . ID=gene-C9F09_08840;Name=frr;end_range=2760,.;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=C9F09_08840;partial=true PYKB01000602.1 Protein Homology CDS 2455 2760 . + 0 ID=cds-TGC95289.1;Parent=gene-C9F09_08840;Dbxref=NCBI_GP:TGC95289.1;Name=TGC95289.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;end_range=2760,.;gbkey=CDS;gene=frr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=C9F09_08840;partial=true;product=ribosome-recycling factor;protein_id=TGC95289.1;transl_table=11 ##sequence-region PYKB01001113.1 1 2754 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001113.1 Genbank region 1 2754 . + . ID=PYKB01001113.1:1..2754;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001113.1 Genbank gene 257 721 . + . ID=gene-C9F09_18720;Name=C9F09_18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18720 PYKB01001113.1 Protein Homology CDS 257 721 . + 0 ID=cds-TGC85634.1;Parent=gene-C9F09_18720;Dbxref=NCBI_GP:TGC85634.1;Name=TGC85634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014171786.1;locus_tag=C9F09_18720;product=ribosome maturation factor;protein_id=TGC85634.1;transl_table=11 PYKB01001113.1 Genbank gene 749 2251 . + . ID=gene-C9F09_18725;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=C9F09_18725 PYKB01001113.1 Protein Homology CDS 749 2251 . + 0 ID=cds-TGC85635.1;Parent=gene-C9F09_18725;Dbxref=NCBI_GP:TGC85635.1;Name=TGC85635.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462200.1;locus_tag=C9F09_18725;product=transcription termination/antitermination protein NusA;protein_id=TGC85635.1;transl_table=11 PYKB01001113.1 Genbank gene 2276 2754 . + . ID=gene-C9F09_18730;Name=infB;end_range=2754,.;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=C9F09_18730;partial=true PYKB01001113.1 Protein Homology CDS 2276 2754 . + 0 ID=cds-TGC85636.1;Parent=gene-C9F09_18730;Dbxref=NCBI_GP:TGC85636.1;Name=TGC85636.1;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;end_range=2754,.;gbkey=CDS;gene=infB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=C9F09_18730;partial=true;product=translation initiation factor IF-2;protein_id=TGC85636.1;transl_table=11 ##sequence-region PYKB01000693.1 1 2749 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000693.1 Genbank region 1 2749 . + . ID=PYKB01000693.1:1..2749;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000693.1 Genbank gene 1 1633 . - . ID=gene-C9F09_10540;Name=C9F09_10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10540;partial=true;start_range=.,1 PYKB01000693.1 Protein Homology CDS 1 1633 . - 0 ID=cds-TGC93816.1;Parent=gene-C9F09_10540;Dbxref=NCBI_GP:TGC93816.1;Name=TGC93816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=C9F09_10540;partial=true;product=sensor domain-containing phosphodiesterase;protein_id=TGC93816.1;start_range=.,1;transl_table=11 PYKB01000693.1 Genbank gene 1730 1867 . - . ID=gene-C9F09_10545;Name=C9F09_10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10545 PYKB01000693.1 Protein Homology CDS 1730 1867 . - 0 ID=cds-TGC93814.1;Parent=gene-C9F09_10545;Dbxref=NCBI_GP:TGC93814.1;Name=TGC93814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=C9F09_10545;product=hypothetical protein;protein_id=TGC93814.1;transl_table=11 PYKB01000693.1 Genbank gene 2046 2237 . + . ID=gene-C9F09_10550;Name=C9F09_10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10550 PYKB01000693.1 Protein Homology CDS 2046 2237 . + 0 ID=cds-TGC93815.1;Parent=gene-C9F09_10550;Dbxref=NCBI_GP:TGC93815.1;Name=TGC93815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=C9F09_10550;product=DUF2633 domain-containing protein;protein_id=TGC93815.1;transl_table=11 PYKB01000693.1 Genbank pseudogene 2475 2720 . + . ID=gene-C9F09_10555;Name=C9F09_10555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10555;pseudo=true PYKB01000693.1 Protein Homology CDS 2475 2720 . + 0 ID=cds-C9F09_10555;Parent=gene-C9F09_10555;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311394.1;locus_tag=C9F09_10555;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001239.1 1 9915 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001239.1 Genbank region 1 9915 . + . ID=PYKB01001239.1:1..9915;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001239.1 Genbank gene 1 75 . + . ID=gene-C9F09_21070;Name=C9F09_21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21070;partial=true;start_range=.,1 PYKB01001239.1 Protein Homology CDS 1 75 . + 0 ID=cds-TGC82706.1;Parent=gene-C9F09_21070;Dbxref=NCBI_GP:TGC82706.1;Name=TGC82706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001701386.1;locus_tag=C9F09_21070;partial=true;product=GTP pyrophosphokinase;protein_id=TGC82706.1;start_range=.,1;transl_table=11 PYKB01001239.1 Genbank gene 160 516 . + . ID=gene-C9F09_21075;Name=C9F09_21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21075 PYKB01001239.1 Protein Homology CDS 160 516 . + 0 ID=cds-TGC82696.1;Parent=gene-C9F09_21075;Dbxref=NCBI_GP:TGC82696.1;Name=TGC82696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461876.3;locus_tag=C9F09_21075;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=TGC82696.1;transl_table=11 PYKB01001239.1 Genbank gene 482 622 . + . ID=gene-C9F09_21080;Name=C9F09_21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21080 PYKB01001239.1 Protein Homology CDS 482 622 . + 0 ID=cds-TGC82697.1;Parent=gene-C9F09_21080;Dbxref=NCBI_GP:TGC82697.1;Name=TGC82697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641033.1;locus_tag=C9F09_21080;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=TGC82697.1;transl_table=11 PYKB01001239.1 Genbank gene 721 1767 . - . ID=gene-C9F09_21085;Name=C9F09_21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21085 PYKB01001239.1 Protein Homology CDS 721 1767 . - 0 ID=cds-TGC82698.1;Parent=gene-C9F09_21085;Dbxref=NCBI_GP:TGC82698.1;Name=TGC82698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006891452.1;locus_tag=C9F09_21085;product=hypothetical protein;protein_id=TGC82698.1;transl_table=11 PYKB01001239.1 Genbank gene 1782 2867 . - . ID=gene-C9F09_21090;Name=C9F09_21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21090 PYKB01001239.1 Protein Homology CDS 1782 2867 . - 0 ID=cds-TGC82699.1;Parent=gene-C9F09_21090;Dbxref=NCBI_GP:TGC82699.1;Name=TGC82699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188944.1;locus_tag=C9F09_21090;product=hypothetical protein;protein_id=TGC82699.1;transl_table=11 PYKB01001239.1 Genbank gene 2896 3432 . - . ID=gene-C9F09_21095;Name=C9F09_21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21095 PYKB01001239.1 Protein Homology CDS 2896 3432 . - 0 ID=cds-TGC82700.1;Parent=gene-C9F09_21095;Dbxref=NCBI_GP:TGC82700.1;Name=TGC82700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457348.1;locus_tag=C9F09_21095;product=fimbrial protein SteF;protein_id=TGC82700.1;transl_table=11 PYKB01001239.1 Genbank gene 3429 3899 . - . ID=gene-C9F09_21100;Name=C9F09_21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21100 PYKB01001239.1 Protein Homology CDS 3429 3899 . - 0 ID=cds-TGC82701.1;Parent=gene-C9F09_21100;Dbxref=NCBI_GP:TGC82701.1;Name=TGC82701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457347.1;locus_tag=C9F09_21100;product=fimbrial protein;protein_id=TGC82701.1;transl_table=11 PYKB01001239.1 Genbank gene 3914 4420 . - . ID=gene-C9F09_21105;Name=C9F09_21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21105 PYKB01001239.1 Protein Homology CDS 3914 4420 . - 0 ID=cds-TGC82702.1;Parent=gene-C9F09_21105;Dbxref=NCBI_GP:TGC82702.1;Name=TGC82702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457346.1;locus_tag=C9F09_21105;product=fimbrial protein;protein_id=TGC82702.1;transl_table=11 PYKB01001239.1 Genbank gene 4440 5213 . - . ID=gene-C9F09_21110;Name=C9F09_21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21110 PYKB01001239.1 Protein Homology CDS 4440 5213 . - 0 ID=cds-TGC82703.1;Parent=gene-C9F09_21110;Dbxref=NCBI_GP:TGC82703.1;Name=TGC82703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457345.1;locus_tag=C9F09_21110;product=fimbrial protein;protein_id=TGC82703.1;transl_table=11 PYKB01001239.1 Genbank gene 5226 7925 . - . ID=gene-C9F09_21115;Name=C9F09_21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21115 PYKB01001239.1 Protein Homology CDS 5226 7925 . - 0 ID=cds-TGC82704.1;Parent=gene-C9F09_21115;Dbxref=NCBI_GP:TGC82704.1;Name=TGC82704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457344.1;locus_tag=C9F09_21115;product=PapC/FimD family outer membrane usher protein;protein_id=TGC82704.1;transl_table=11 PYKB01001239.1 Genbank gene 8005 8592 . - . ID=gene-C9F09_21120;Name=C9F09_21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21120 PYKB01001239.1 Protein Homology CDS 8005 8592 . - 0 ID=cds-TGC82705.1;Parent=gene-C9F09_21120;Dbxref=NCBI_GP:TGC82705.1;Name=TGC82705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=C9F09_21120;product=fimbrial protein SteA;protein_id=TGC82705.1;transl_table=11 PYKB01001239.1 Genbank gene 9199 9915 . + . ID=gene-C9F09_21125;Name=C9F09_21125;end_range=9915,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21125;partial=true PYKB01001239.1 Protein Homology CDS 9199 9915 . + 0 ID=cds-TGC82707.1;Parent=gene-C9F09_21125;Dbxref=NCBI_GP:TGC82707.1;Name=TGC82707.1;end_range=9915,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457343.1;locus_tag=C9F09_21125;partial=true;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=TGC82707.1;transl_table=11 ##sequence-region PYKB01000739.1 1 2748 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000739.1 Genbank region 1 2748 . + . ID=PYKB01000739.1:1..2748;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000739.1 Genbank gene 1 1163 . - . ID=gene-C9F09_11370;Name=C9F09_11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11370;partial=true;start_range=.,1 PYKB01000739.1 Protein Homology CDS 1 1163 . - 0 ID=cds-TGC93162.1;Parent=gene-C9F09_11370;Dbxref=NCBI_GP:TGC93162.1;Name=TGC93162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=C9F09_11370;partial=true;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=TGC93162.1;start_range=.,1;transl_table=11 PYKB01000739.1 Genbank gene 1333 2613 . + . ID=gene-C9F09_11375;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=C9F09_11375 PYKB01000739.1 Protein Homology CDS 1333 2613 . + 0 ID=cds-TGC93163.1;Parent=gene-C9F09_11375;Dbxref=NCBI_GP:TGC93163.1;Name=TGC93163.1;gbkey=CDS;gene=hemL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=C9F09_11375;product=glutamate-1-semialdehyde-2%2C1-aminomutase;protein_id=TGC93163.1;transl_table=11 ##sequence-region PYKB01001280.1 1 2742 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001280.1 Genbank region 1 2742 . + . ID=PYKB01001280.1:1..2742;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001280.1 Genbank gene 1 931 . - . ID=gene-C9F09_21915;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=C9F09_21915;partial=true;start_range=.,1 PYKB01001280.1 Protein Homology CDS 1 931 . - 0 ID=cds-TGC81999.1;Parent=gene-C9F09_21915;Dbxref=NCBI_GP:TGC81999.1;Name=TGC81999.1;Note=catalyzes the formation of 5-dehydro-4-deoxy-D-glucarate from D-galactarate;gbkey=CDS;gene=garD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=C9F09_21915;partial=true;product=galactarate dehydratase;protein_id=TGC81999.1;start_range=.,1;transl_table=11 PYKB01001280.1 Genbank gene 1461 2231 . + . ID=gene-C9F09_21920;Name=C9F09_21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21920 PYKB01001280.1 Protein Homology CDS 1461 2231 . + 0 ID=cds-TGC82000.1;Parent=gene-C9F09_21920;Dbxref=NCBI_GP:TGC82000.1;Name=TGC82000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457635.1;locus_tag=C9F09_21920;product=5-keto-4-deoxy-D-glucarate aldolase;protein_id=TGC82000.1;transl_table=11 PYKB01001280.1 Genbank gene 2257 2742 . + . ID=gene-C9F09_21925;Name=garR;end_range=2742,.;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=C9F09_21925;partial=true PYKB01001280.1 Protein Homology CDS 2257 2742 . + 0 ID=cds-TGC82001.1;Parent=gene-C9F09_21925;Dbxref=NCBI_GP:TGC82001.1;Name=TGC82001.1;Note=catalyzes the reduction of tartronate semialdehyde to glycerate;end_range=2742,.;gbkey=CDS;gene=garR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=C9F09_21925;partial=true;product=2-hydroxy-3-oxopropionate reductase;protein_id=TGC82001.1;transl_table=11 ##sequence-region PYKB01000744.1 1 2737 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000744.1 Genbank region 1 2737 . + . ID=PYKB01000744.1:1..2737;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000744.1 Genbank gene 1 1092 . + . ID=gene-C9F09_11465;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=C9F09_11465 PYKB01000744.1 Protein Homology CDS 1 1092 . + 0 ID=cds-TGC92998.1;Parent=gene-C9F09_11465;Dbxref=NCBI_GP:TGC92998.1;Name=TGC92998.1;gbkey=CDS;gene=nhaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001573729.1;locus_tag=C9F09_11465;product=Na+/H+ antiporter NhaA;protein_id=TGC92998.1;transl_table=11 PYKB01000744.1 Genbank gene 1154 2053 . + . ID=gene-C9F09_11470;Name=C9F09_11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11470 PYKB01000744.1 Protein Homology CDS 1154 2053 . + 0 ID=cds-TGC92999.1;Parent=gene-C9F09_11470;Dbxref=NCBI_GP:TGC92999.1;Name=TGC92999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454651.1;locus_tag=C9F09_11470;product=transcriptional activator NhaR;protein_id=TGC92999.1;transl_table=11 PYKB01000744.1 Genbank gene 2108 2737 . - . ID=gene-C9F09_11475;Name=C9F09_11475;end_range=2737,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11475;partial=true PYKB01000744.1 Protein Homology CDS 2108 2737 . - 0 ID=cds-TGC93000.1;Parent=gene-C9F09_11475;Dbxref=NCBI_GP:TGC93000.1;Name=TGC93000.1;end_range=2737,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454652.1;locus_tag=C9F09_11475;partial=true;product=family 31 glucosidase;protein_id=TGC93000.1;transl_table=11 ##sequence-region PYKB01000822.1 1 2734 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000822.1 Genbank region 1 2734 . + . ID=PYKB01000822.1:1..2734;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000822.1 Genbank gene 1 565 . - . ID=gene-C9F09_12950;Name=C9F09_12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12950;partial=true;start_range=.,1 PYKB01000822.1 Protein Homology CDS 1 565 . - 0 ID=cds-TGC91774.1;Parent=gene-C9F09_12950;Dbxref=NCBI_GP:TGC91774.1;Name=TGC91774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456617.1;locus_tag=C9F09_12950;partial=true;product=NAD(P)-dependent oxidoreductase;protein_id=TGC91774.1;start_range=.,1;transl_table=11 PYKB01000822.1 Genbank gene 728 778 . + . ID=gene-C9F09_12955;Name=C9F09_12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12955 PYKB01000822.1 Protein Homology CDS 728 778 . + 0 ID=cds-TGC91777.1;Parent=gene-C9F09_12955;Dbxref=NCBI_GP:TGC91777.1;Name=TGC91777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=C9F09_12955;product=his operon leader peptide;protein_id=TGC91777.1;transl_table=11 PYKB01000822.1 Genbank gene 924 1823 . + . ID=gene-C9F09_12960;Name=C9F09_12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12960 PYKB01000822.1 Protein Homology CDS 924 1823 . + 0 ID=cds-TGC91775.1;Parent=gene-C9F09_12960;Dbxref=NCBI_GP:TGC91775.1;Name=TGC91775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=C9F09_12960;product=ATP phosphoribosyltransferase;protein_id=TGC91775.1;transl_table=11 PYKB01000822.1 Genbank gene 1926 2734 . + . ID=gene-C9F09_12965;Name=hisD;end_range=2734,.;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=C9F09_12965;partial=true PYKB01000822.1 Protein Homology CDS 1926 2734 . + 0 ID=cds-TGC91776.1;Parent=gene-C9F09_12965;Dbxref=NCBI_GP:TGC91776.1;Name=TGC91776.1;end_range=2734,.;gbkey=CDS;gene=hisD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456620.1;locus_tag=C9F09_12965;partial=true;product=histidinol dehydrogenase;protein_id=TGC91776.1;transl_table=11 ##sequence-region PYKB01001586.1 1 2730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001586.1 Genbank region 1 2730 . + . ID=PYKB01001586.1:1..2730;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001586.1 Genbank gene 1 744 . + . ID=gene-C9F09_27870;Name=C9F09_27870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27870;partial=true;start_range=.,1 PYKB01001586.1 Protein Homology CDS 1 744 . + 0 ID=cds-TGC75111.1;Parent=gene-C9F09_27870;Dbxref=NCBI_GP:TGC75111.1;Name=TGC75111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=C9F09_27870;partial=true;product=hypothetical protein;protein_id=TGC75111.1;start_range=.,1;transl_table=11 PYKB01001586.1 Genbank gene 756 2249 . + . ID=gene-C9F09_27875;Name=C9F09_27875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27875 PYKB01001586.1 Protein Homology CDS 756 2249 . + 0 ID=cds-TGC75112.1;Parent=gene-C9F09_27875;Dbxref=NCBI_GP:TGC75112.1;Name=TGC75112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595936.1;locus_tag=C9F09_27875;product=sel1 repeat family protein;protein_id=TGC75112.1;transl_table=11 PYKB01001586.1 Genbank gene 2331 2730 . - . ID=gene-C9F09_27880;Name=C9F09_27880;end_range=2730,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27880;partial=true PYKB01001586.1 Protein Homology CDS 2331 2730 . - 1 ID=cds-TGC75113.1;Parent=gene-C9F09_27880;Dbxref=NCBI_GP:TGC75113.1;Name=TGC75113.1;end_range=2730,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007705361.1;locus_tag=C9F09_27880;partial=true;product=protoheme IX farnesyltransferase;protein_id=TGC75113.1;transl_table=11 ##sequence-region PYKB01001124.1 1 2682 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001124.1 Genbank region 1 2682 . + . ID=PYKB01001124.1:1..2682;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001124.1 Genbank gene 1 658 . + . ID=gene-C9F09_18885;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=C9F09_18885;partial=true;start_range=.,1 PYKB01001124.1 Protein Homology CDS 1 658 . + 1 ID=cds-TGC85394.1;Parent=gene-C9F09_18885;Dbxref=NCBI_GP:TGC85394.1;Name=TGC85394.1;Note=catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol;gbkey=CDS;gene=aceK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=C9F09_18885;partial=true;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=TGC85394.1;start_range=.,1;transl_table=11 PYKB01001124.1 Genbank gene 622 1029 . - . ID=gene-C9F09_18890;Name=C9F09_18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18890 PYKB01001124.1 Protein Homology CDS 622 1029 . - 0 ID=cds-TGC85397.1;Parent=gene-C9F09_18890;Dbxref=NCBI_GP:TGC85397.1;Name=TGC85397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=C9F09_18890;product=ASCH domain-containing protein;protein_id=TGC85397.1;transl_table=11 PYKB01001124.1 Genbank gene 1040 1864 . - . ID=gene-C9F09_18895;Name=C9F09_18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18895 PYKB01001124.1 Protein Homology CDS 1040 1864 . - 0 ID=cds-TGC85395.1;Parent=gene-C9F09_18895;Dbxref=NCBI_GP:TGC85395.1;Name=TGC85395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458506.1;locus_tag=C9F09_18895;product=IclR family transcriptional regulator;protein_id=TGC85395.1;transl_table=11 PYKB01001124.1 Genbank gene 2082 2682 . + . ID=gene-C9F09_18900;Name=metH;end_range=2682,.;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=C9F09_18900;partial=true PYKB01001124.1 Protein Homology CDS 2082 2682 . + 0 ID=cds-TGC85396.1;Parent=gene-C9F09_18900;Dbxref=NCBI_GP:TGC85396.1;Name=TGC85396.1;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;end_range=2682,.;gbkey=CDS;gene=metH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463053.3;locus_tag=C9F09_18900;partial=true;product=methionine synthase;protein_id=TGC85396.1;transl_table=11 ##sequence-region PYKB01001075.1 1 2716 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001075.1 Genbank region 1 2716 . + . ID=PYKB01001075.1:1..2716;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001075.1 Genbank gene 1 2716 . - . ID=gene-C9F09_17980;Name=C9F09_17980;end_range=2716,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17980;partial=true;start_range=.,1 PYKB01001075.1 Protein Homology CDS 1 2716 . - 0 ID=cds-TGC86539.1;Parent=gene-C9F09_17980;Dbxref=NCBI_GP:TGC86539.1;Name=TGC86539.1;end_range=2716,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=C9F09_17980;partial=true;product=miniconductance mechanosensitive channel MscM;protein_id=TGC86539.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000727.1 1 2715 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000727.1 Genbank region 1 2715 . + . ID=PYKB01000727.1:1..2715;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000727.1 Genbank gene 275 1459 . - . ID=gene-C9F09_11115;Name=C9F09_11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11115 PYKB01000727.1 Protein Homology CDS 275 1459 . - 0 ID=cds-TGC93354.1;Parent=gene-C9F09_11115;Dbxref=NCBI_GP:TGC93354.1;Name=TGC93354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458941.1;locus_tag=C9F09_11115;product=MFS transporter;protein_id=TGC93354.1;transl_table=11 PYKB01000727.1 Genbank gene 1679 2715 . - . ID=gene-C9F09_11120;Name=C9F09_11120;end_range=2715,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11120;partial=true PYKB01000727.1 Protein Homology CDS 1679 2715 . - 2 ID=cds-TGC93355.1;Parent=gene-C9F09_11120;Dbxref=NCBI_GP:TGC93355.1;Name=TGC93355.1;end_range=2715,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458942.1;locus_tag=C9F09_11120;partial=true;product=DUF445 domain-containing protein;protein_id=TGC93355.1;transl_table=11 ##sequence-region PYKB01001484.1 1 2710 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001484.1 Genbank region 1 2710 . + . ID=PYKB01001484.1:1..2710;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001484.1 Genbank gene 1 816 . - . ID=gene-C9F09_25785;Name=C9F09_25785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25785;partial=true;start_range=.,1 PYKB01001484.1 Protein Homology CDS 1 816 . - 0 ID=cds-TGC77601.1;Parent=gene-C9F09_25785;Dbxref=NCBI_GP:TGC77601.1;Name=TGC77601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=C9F09_25785;partial=true;product=hypothetical protein;protein_id=TGC77601.1;start_range=.,1;transl_table=11 PYKB01001484.1 Genbank gene 1024 2385 . - . ID=gene-C9F09_25790;Name=C9F09_25790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25790 PYKB01001484.1 Protein Homology CDS 1024 2385 . - 0 ID=cds-TGC77602.1;Parent=gene-C9F09_25790;Dbxref=NCBI_GP:TGC77602.1;Name=TGC77602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455358.1;locus_tag=C9F09_25790;product=ATP-dependent RNA helicase RhlE;protein_id=TGC77602.1;transl_table=11 ##sequence-region PYKB01001297.1 1 2709 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001297.1 Genbank region 1 2709 . + . ID=PYKB01001297.1:1..2709;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001297.1 Genbank gene 1 708 . - . ID=gene-C9F09_22215;Name=C9F09_22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22215;partial=true;start_range=.,1 PYKB01001297.1 Protein Homology CDS 1 708 . - 0 ID=cds-TGC81688.1;Parent=gene-C9F09_22215;Dbxref=NCBI_GP:TGC81688.1;Name=TGC81688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418510.1;locus_tag=C9F09_22215;partial=true;product=allose ABC transporter;protein_id=TGC81688.1;start_range=.,1;transl_table=11 PYKB01001297.1 Genbank gene 687 2219 . - . ID=gene-C9F09_22220;Name=C9F09_22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22220 PYKB01001297.1 Protein Homology CDS 687 2219 . - 0 ID=cds-TGC81689.1;Parent=gene-C9F09_22220;Dbxref=NCBI_GP:TGC81689.1;Name=TGC81689.1;Note=with AlsBC acts to import allose into the cell%3B AlsA contain 2 ATP-binding domains;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418511.1;locus_tag=C9F09_22220;product=allose ABC transporter ATP-binding protein;protein_id=TGC81689.1;transl_table=11 PYKB01001297.1 Genbank gene 2339 2709 . - . ID=gene-C9F09_22225;Name=C9F09_22225;end_range=2709,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22225;partial=true PYKB01001297.1 Protein Homology CDS 2339 2709 . - 2 ID=cds-TGC81690.1;Parent=gene-C9F09_22225;Dbxref=NCBI_GP:TGC81690.1;Name=TGC81690.1;end_range=2709,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418512.1;locus_tag=C9F09_22225;partial=true;product=allose ABC transporter;protein_id=TGC81690.1;transl_table=11 ##sequence-region PYKB01001333.1 1 9770 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001333.1 Genbank region 1 9770 . + . ID=PYKB01001333.1:1..9770;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001333.1 Genbank pseudogene 57 650 . + . ID=gene-C9F09_22860;Name=C9F09_22860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22860;pseudo=true PYKB01001333.1 Protein Homology CDS 57 650 . + 0 ID=cds-C9F09_22860;Parent=gene-C9F09_22860;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461649.1;locus_tag=C9F09_22860;product=capsid protein;pseudo=true;transl_table=11 PYKB01001333.1 Genbank gene 667 1731 . + . ID=gene-C9F09_22865;Name=C9F09_22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22865 PYKB01001333.1 Protein Homology CDS 667 1731 . + 0 ID=cds-TGC80864.1;Parent=gene-C9F09_22865;Dbxref=NCBI_GP:TGC80864.1;Name=TGC80864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458707.1;locus_tag=C9F09_22865;product=phage major capsid protein%2C P2 family;protein_id=TGC80864.1;transl_table=11 PYKB01001333.1 Genbank gene 1735 2385 . + . ID=gene-C9F09_22870;Name=C9F09_22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22870 PYKB01001333.1 Protein Homology CDS 1735 2385 . + 0 ID=cds-TGC80865.1;Parent=gene-C9F09_22870;Dbxref=NCBI_GP:TGC80865.1;Name=TGC80865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461647.1;locus_tag=C9F09_22870;product=hypothetical protein;protein_id=TGC80865.1;transl_table=11 PYKB01001333.1 Genbank gene 2479 2943 . + . ID=gene-C9F09_22875;Name=C9F09_22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22875 PYKB01001333.1 Protein Homology CDS 2479 2943 . + 0 ID=cds-TGC80866.1;Parent=gene-C9F09_22875;Dbxref=NCBI_GP:TGC80866.1;Name=TGC80866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461646.1;locus_tag=C9F09_22875;product=head completion/stabilization protein;protein_id=TGC80866.1;transl_table=11 PYKB01001333.1 Genbank gene 2943 3146 . + . ID=gene-C9F09_22880;Name=C9F09_22880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22880 PYKB01001333.1 Protein Homology CDS 2943 3146 . + 0 ID=cds-TGC80867.1;Parent=gene-C9F09_22880;Dbxref=NCBI_GP:TGC80867.1;Name=TGC80867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458704.1;locus_tag=C9F09_22880;product=phage tail protein;protein_id=TGC80867.1;transl_table=11 PYKB01001333.1 Genbank gene 3150 3365 . + . ID=gene-C9F09_22885;Name=C9F09_22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22885 PYKB01001333.1 Protein Homology CDS 3150 3365 . + 0 ID=cds-TGC80868.1;Parent=gene-C9F09_22885;Dbxref=NCBI_GP:TGC80868.1;Name=TGC80868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461644.1;locus_tag=C9F09_22885;product=hypothetical protein;protein_id=TGC80868.1;transl_table=11 PYKB01001333.1 Genbank gene 3346 3855 . + . ID=gene-C9F09_22890;Name=C9F09_22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22890 PYKB01001333.1 Protein Homology CDS 3346 3855 . + 0 ID=cds-TGC80869.1;Parent=gene-C9F09_22890;Dbxref=NCBI_GP:TGC80869.1;Name=TGC80869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001069913.1;locus_tag=C9F09_22890;product=lysozyme;protein_id=TGC80869.1;transl_table=11 PYKB01001333.1 Genbank gene 3860 4237 . + . ID=gene-C9F09_22895;Name=C9F09_22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22895 PYKB01001333.1 Protein Homology CDS 3860 4237 . + 0 ID=cds-TGC80870.1;Parent=gene-C9F09_22895;Dbxref=NCBI_GP:TGC80870.1;Name=TGC80870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458701.1;locus_tag=C9F09_22895;product=peptidase;protein_id=TGC80870.1;transl_table=11 PYKB01001333.1 Genbank gene 4237 4662 . + . ID=gene-C9F09_22900;Name=C9F09_22900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22900 PYKB01001333.1 Protein Homology CDS 4237 4662 . + 0 ID=cds-TGC80871.1;Parent=gene-C9F09_22900;Dbxref=NCBI_GP:TGC80871.1;Name=TGC80871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458700.1;locus_tag=C9F09_22900;product=LysB family phage lysis regulatory protein;protein_id=TGC80871.1;transl_table=11 PYKB01001333.1 Genbank gene 4592 4795 . + . ID=gene-C9F09_22905;Name=C9F09_22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22905 PYKB01001333.1 Protein Homology CDS 4592 4795 . + 0 ID=cds-TGC80872.1;Parent=gene-C9F09_22905;Dbxref=NCBI_GP:TGC80872.1;Name=TGC80872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009008393.1;locus_tag=C9F09_22905;product=hypothetical protein;protein_id=TGC80872.1;transl_table=11 PYKB01001333.1 Genbank gene 4758 5189 . + . ID=gene-C9F09_22910;Name=C9F09_22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22910 PYKB01001333.1 Protein Homology CDS 4758 5189 . + 0 ID=cds-TGC80873.1;Parent=gene-C9F09_22910;Dbxref=NCBI_GP:TGC80873.1;Name=TGC80873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457876.1;locus_tag=C9F09_22910;product=phage tail protein;protein_id=TGC80873.1;transl_table=11 PYKB01001333.1 Genbank gene 5182 5631 . + . ID=gene-C9F09_22915;Name=C9F09_22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22915 PYKB01001333.1 Protein Homology CDS 5182 5631 . + 0 ID=cds-TGC80874.1;Parent=gene-C9F09_22915;Dbxref=NCBI_GP:TGC80874.1;Name=TGC80874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554841.1;locus_tag=C9F09_22915;product=phage virion morphogenesis protein;protein_id=TGC80874.1;transl_table=11 PYKB01001333.1 Genbank gene 5633 6328 . - . ID=gene-C9F09_22920;Name=C9F09_22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22920 PYKB01001333.1 Protein Homology CDS 5633 6328 . - 0 ID=cds-TGC80875.1;Parent=gene-C9F09_22920;Dbxref=NCBI_GP:TGC80875.1;Name=TGC80875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235545.1;locus_tag=C9F09_22920;product=hypothetical protein;protein_id=TGC80875.1;transl_table=11 PYKB01001333.1 Genbank gene 6429 7007 . + . ID=gene-C9F09_22925;Name=C9F09_22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22925 PYKB01001333.1 Protein Homology CDS 6429 7007 . + 0 ID=cds-TGC80876.1;Parent=gene-C9F09_22925;Dbxref=NCBI_GP:TGC80876.1;Name=TGC80876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457878.1;locus_tag=C9F09_22925;product=phage baseplate assembly protein V;protein_id=TGC80876.1;transl_table=11 PYKB01001333.1 Genbank gene 7004 7363 . + . ID=gene-C9F09_22930;Name=C9F09_22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22930 PYKB01001333.1 Protein Homology CDS 7004 7363 . + 0 ID=cds-TGC80877.1;Parent=gene-C9F09_22930;Dbxref=NCBI_GP:TGC80877.1;Name=TGC80877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461637.1;locus_tag=C9F09_22930;product=baseplate assembly protein;protein_id=TGC80877.1;transl_table=11 PYKB01001333.1 Genbank gene 7350 8258 . + . ID=gene-C9F09_22935;Name=C9F09_22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22935 PYKB01001333.1 Protein Homology CDS 7350 8258 . + 0 ID=cds-TGC80878.1;Parent=gene-C9F09_22935;Dbxref=NCBI_GP:TGC80878.1;Name=TGC80878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461636.1;locus_tag=C9F09_22935;product=baseplate assembly protein;protein_id=TGC80878.1;transl_table=11 PYKB01001333.1 Genbank gene 8251 8856 . + . ID=gene-C9F09_22940;Name=C9F09_22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22940 PYKB01001333.1 Protein Homology CDS 8251 8856 . + 0 ID=cds-TGC80879.1;Parent=gene-C9F09_22940;Dbxref=NCBI_GP:TGC80879.1;Name=TGC80879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461635.1;locus_tag=C9F09_22940;product=phage tail protein I;protein_id=TGC80879.1;transl_table=11 PYKB01001333.1 Genbank pseudogene 8853 9686 . + . ID=gene-C9F09_22945;Name=C9F09_22945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22945;pseudo=true PYKB01001333.1 Protein Homology CDS 8853 9686 . + 0 ID=cds-C9F09_22945;Parent=gene-C9F09_22945;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461634.1;locus_tag=C9F09_22945;product=phage tail protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001200.1 1 2708 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001200.1 Genbank region 1 2708 . + . ID=PYKB01001200.1:1..2708;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001200.1 Genbank gene 1 449 . + . ID=gene-C9F09_20440;Name=C9F09_20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20440;partial=true;start_range=.,1 PYKB01001200.1 Protein Homology CDS 1 449 . + 2 ID=cds-TGC83537.1;Parent=gene-C9F09_20440;Dbxref=NCBI_GP:TGC83537.1;Name=TGC83537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=C9F09_20440;partial=true;product=transporter;protein_id=TGC83537.1;start_range=.,1;transl_table=11 PYKB01001200.1 Genbank gene 480 752 . - . ID=gene-C9F09_20445;Name=C9F09_20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20445 PYKB01001200.1 Protein Homology CDS 480 752 . - 0 ID=cds-TGC83538.1;Parent=gene-C9F09_20445;Dbxref=NCBI_GP:TGC83538.1;Name=TGC83538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457418.1;locus_tag=C9F09_20445;product=transcriptional regulator;protein_id=TGC83538.1;transl_table=11 PYKB01001200.1 Genbank gene 875 1717 . + . ID=gene-C9F09_20450;Name=C9F09_20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20450 PYKB01001200.1 Protein Homology CDS 875 1717 . + 0 ID=cds-TGC83539.1;Parent=gene-C9F09_20450;Dbxref=NCBI_GP:TGC83539.1;Name=TGC83539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=C9F09_20450;product=nickel/cobalt efflux protein RcnA;protein_id=TGC83539.1;transl_table=11 PYKB01001200.1 Genbank gene 1927 2685 . - . ID=gene-C9F09_20455;Name=C9F09_20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20455 PYKB01001200.1 Protein Homology CDS 1927 2685 . - 0 ID=cds-TGC83540.1;Parent=gene-C9F09_20455;Dbxref=NCBI_GP:TGC83540.1;Name=TGC83540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457419.1;locus_tag=C9F09_20455;product=transcriptional regulator;protein_id=TGC83540.1;transl_table=11 ##sequence-region PYKB01000016.1 1 2701 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000016.1 Genbank region 1 2701 . + . ID=PYKB01000016.1:1..2701;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000016.1 Genbank gene 1 138 . + . ID=gene-C9F09_00170;Name=C9F09_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00170;partial=true;start_range=.,1 PYKB01000016.1 Protein Homology CDS 1 138 . + 0 ID=cds-TGD07047.1;Parent=gene-C9F09_00170;Dbxref=NCBI_GP:TGD07047.1;Name=TGD07047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=C9F09_00170;partial=true;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=TGD07047.1;start_range=.,1;transl_table=11 PYKB01000016.1 Genbank gene 135 1355 . + . ID=gene-C9F09_00175;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=C9F09_00175 PYKB01000016.1 Protein Homology CDS 135 1355 . + 0 ID=cds-TGD07048.1;Parent=gene-C9F09_00175;Dbxref=NCBI_GP:TGD07048.1;Name=TGD07048.1;gbkey=CDS;gene=wcaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=C9F09_00175;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=TGD07048.1;transl_table=11 PYKB01000016.1 Genbank gene 1366 2701 . + . ID=gene-C9F09_00180;Name=wcaM;end_range=2701,.;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=C9F09_00180;partial=true PYKB01000016.1 Protein Homology CDS 1366 2701 . + 0 ID=cds-TGD07049.1;Parent=gene-C9F09_00180;Dbxref=NCBI_GP:TGD07049.1;Name=TGD07049.1;end_range=2701,.;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=C9F09_00180;partial=true;product=colanic acid biosynthesis protein WcaM;protein_id=TGD07049.1;transl_table=11 ##sequence-region PYKB01000337.1 1 2698 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000337.1 Genbank region 1 2698 . + . ID=PYKB01000337.1:1..2698;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000337.1 Genbank gene 1 566 . - . ID=gene-C9F09_03735;Name=C9F09_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03735;partial=true;start_range=.,1 PYKB01000337.1 Protein Homology CDS 1 566 . - 0 ID=cds-TGD00791.1;Parent=gene-C9F09_03735;Dbxref=NCBI_GP:TGD00791.1;Name=TGD00791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=C9F09_03735;partial=true;product=penicillin-binding protein activator;protein_id=TGD00791.1;start_range=.,1;transl_table=11 PYKB01000337.1 Genbank gene 630 1493 . + . ID=gene-C9F09_03740;Name=C9F09_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03740 PYKB01000337.1 Protein Homology CDS 630 1493 . + 0 ID=cds-TGD00792.1;Parent=gene-C9F09_03740;Dbxref=NCBI_GP:TGD00792.1;Name=TGD00792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457647.1;locus_tag=C9F09_03740;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=TGD00792.1;transl_table=11 PYKB01000337.1 Genbank gene 1547 1762 . + . ID=gene-C9F09_03745;Name=C9F09_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03745 PYKB01000337.1 Protein Homology CDS 1547 1762 . + 0 ID=cds-TGD00793.1;Parent=gene-C9F09_03745;Dbxref=NCBI_GP:TGD00793.1;Name=TGD00793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667201.1;locus_tag=C9F09_03745;product=hypothetical protein;protein_id=TGD00793.1;transl_table=11 PYKB01000337.1 Genbank gene 1662 2423 . - . ID=gene-C9F09_03750;Name=C9F09_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03750 PYKB01000337.1 Protein Homology CDS 1662 2423 . - 0 ID=cds-TGD00794.1;Parent=gene-C9F09_03750;Dbxref=NCBI_GP:TGD00794.1;Name=TGD00794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=C9F09_03750;product=transcriptional regulator;protein_id=TGD00794.1;transl_table=11 PYKB01000337.1 Genbank gene 2534 2698 . - . ID=gene-C9F09_03755;Name=C9F09_03755;end_range=2698,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03755;partial=true PYKB01000337.1 Protein Homology CDS 2534 2698 . - 0 ID=cds-TGD00795.1;Parent=gene-C9F09_03755;Dbxref=NCBI_GP:TGD00795.1;Name=TGD00795.1;Note=Zn-dependent%3B NAD(P)-binding%3B catalyzes the formation of tagatose-6-phosphate from galactitol-1-phosphate;end_range=2698,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457645.1;locus_tag=C9F09_03755;partial=true;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=TGD00795.1;transl_table=11 ##sequence-region PYKB01001374.1 1 2697 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001374.1 Genbank region 1 2697 . + . ID=PYKB01001374.1:1..2697;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001374.1 Genbank gene 1 1899 . - . ID=gene-C9F09_23630;Name=C9F09_23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23630;partial=true;start_range=.,1 PYKB01001374.1 Protein Homology CDS 1 1899 . - 0 ID=cds-TGC80065.1;Parent=gene-C9F09_23630;Dbxref=NCBI_GP:TGC80065.1;Name=TGC80065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=C9F09_23630;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=TGC80065.1;start_range=.,1;transl_table=11 PYKB01001374.1 Genbank gene 2412 2697 . + . ID=gene-C9F09_23635;Name=C9F09_23635;end_range=2697,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23635;partial=true PYKB01001374.1 Protein Homology CDS 2412 2697 . + 0 ID=cds-TGC80066.1;Parent=gene-C9F09_23635;Dbxref=NCBI_GP:TGC80066.1;Name=TGC80066.1;end_range=2697,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454967.1;locus_tag=C9F09_23635;partial=true;product=porphobilinogen synthase;protein_id=TGC80066.1;transl_table=11 ##sequence-region PYKB01001451.1 1 2695 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001451.1 Genbank region 1 2695 . + . ID=PYKB01001451.1:1..2695;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001451.1 Genbank gene 170 955 . + . ID=gene-C9F09_25230;Name=C9F09_25230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25230 PYKB01001451.1 Protein Homology CDS 170 955 . + 0 ID=cds-TGC78214.1;Parent=gene-C9F09_25230;Dbxref=NCBI_GP:TGC78214.1;Name=TGC78214.1;Note=enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461470.3;locus_tag=C9F09_25230;product=enhanced serine sensitivity protein SseB;protein_id=TGC78214.1;transl_table=11 PYKB01001451.1 Genbank gene 1191 1400 . - . ID=gene-C9F09_25235;Name=C9F09_25235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25235 PYKB01001451.1 Protein Homology CDS 1191 1400 . - 0 ID=cds-TGC78217.1;Parent=gene-C9F09_25235;Dbxref=NCBI_GP:TGC78217.1;Name=TGC78217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669389.1;locus_tag=C9F09_25235;product=hypothetical protein;protein_id=TGC78217.1;transl_table=11 PYKB01001451.1 Genbank gene 1524 2192 . - . ID=gene-C9F09_25240;Name=C9F09_25240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25240 PYKB01001451.1 Protein Homology CDS 1524 2192 . - 0 ID=cds-TGC78215.1;Parent=gene-C9F09_25240;Dbxref=NCBI_GP:TGC78215.1;Name=TGC78215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457065.1;locus_tag=C9F09_25240;product=DUF5066 domain-containing protein;protein_id=TGC78215.1;transl_table=11 PYKB01001451.1 Genbank gene 2439 2695 . - . ID=gene-C9F09_25245;Name=C9F09_25245;end_range=2695,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25245;partial=true PYKB01001451.1 Protein Homology CDS 2439 2695 . - 2 ID=cds-TGC78216.1;Parent=gene-C9F09_25245;Dbxref=NCBI_GP:TGC78216.1;Name=TGC78216.1;end_range=2695,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457064.1;locus_tag=C9F09_25245;partial=true;product=3-mercaptopyruvate sulfurtransferase;protein_id=TGC78216.1;transl_table=11 ##sequence-region PYKB01001046.1 1 2692 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001046.1 Genbank region 1 2692 . + . ID=PYKB01001046.1:1..2692;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001046.1 Genbank gene 3 803 . + . ID=gene-C9F09_17585;Name=C9F09_17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17585 PYKB01001046.1 Protein Homology CDS 3 803 . + 0 ID=cds-TGC87170.1;Parent=gene-C9F09_17585;Dbxref=NCBI_GP:TGC87170.1;Name=TGC87170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004591571.1;locus_tag=C9F09_17585;product=phosphonoacetaldehyde hydrolase;protein_id=TGC87170.1;transl_table=11 PYKB01001046.1 Genbank gene 900 1490 . - . ID=gene-C9F09_17590;Name=C9F09_17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17590 PYKB01001046.1 Protein Homology CDS 900 1490 . - 0 ID=cds-TGC87171.1;Parent=gene-C9F09_17590;Dbxref=NCBI_GP:TGC87171.1;Name=TGC87171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455027.1;locus_tag=C9F09_17590;product=protein deglycase YajL;protein_id=TGC87171.1;transl_table=11 PYKB01001046.1 Genbank gene 1453 2364 . - . ID=gene-C9F09_17595;Name=C9F09_17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17595 PYKB01001046.1 Protein Homology CDS 1453 2364 . - 0 ID=cds-TGC87172.1;Parent=gene-C9F09_17595;Dbxref=NCBI_GP:TGC87172.1;Name=TGC87172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=C9F09_17595;product=2-dehydropantoate 2-reductase;protein_id=TGC87172.1;transl_table=11 PYKB01001046.1 Genbank pseudogene 2472 2669 . + . ID=gene-C9F09_17600;Name=C9F09_17600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17600;pseudo=true PYKB01001046.1 Protein Homology CDS 2472 2669 . + 0 ID=cds-C9F09_17600;Parent=gene-C9F09_17600;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001304829.1;locus_tag=C9F09_17600;product=YajQ family cyclic di-GMP-binding protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001438.1 1 2688 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001438.1 Genbank region 1 2688 . + . ID=PYKB01001438.1:1..2688;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001438.1 Genbank pseudogene 1 213 . + . ID=gene-C9F09_24840;Name=C9F09_24840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_24840;pseudo=true PYKB01001438.1 Protein Homology CDS 1 213 . + 0 ID=cds-C9F09_24840;Parent=gene-C9F09_24840;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=C9F09_24840;product=multifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase;pseudo=true;transl_table=11 PYKB01001438.1 Genbank gene 408 1298 . + . ID=gene-C9F09_24845;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=C9F09_24845 PYKB01001438.1 Protein Homology CDS 408 1298 . + 0 ID=cds-TGC78568.1;Parent=gene-C9F09_24845;Dbxref=NCBI_GP:TGC78568.1;Name=TGC78568.1;Note=MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor;gbkey=CDS;gene=metF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457946.1;locus_tag=C9F09_24845;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=TGC78568.1;transl_table=11 PYKB01001438.1 Genbank gene 1463 2688 . + . ID=gene-C9F09_24850;Name=C9F09_24850;end_range=2688,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24850;partial=true PYKB01001438.1 Protein Homology CDS 1463 2688 . + 0 ID=cds-TGC78569.1;Parent=gene-C9F09_24850;Dbxref=NCBI_GP:TGC78569.1;Name=TGC78569.1;end_range=2688,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457945.1;locus_tag=C9F09_24850;partial=true;product=hypothetical protein;protein_id=TGC78569.1;transl_table=11 ##sequence-region PYKB01001488.1 1 2681 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001488.1 Genbank region 1 2681 . + . ID=PYKB01001488.1:1..2681;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001488.1 Genbank gene 1 912 . + . ID=gene-C9F09_25855;Name=C9F09_25855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25855;partial=true;start_range=.,1 PYKB01001488.1 Protein Homology CDS 1 912 . + 0 ID=cds-TGC77526.1;Parent=gene-C9F09_25855;Dbxref=NCBI_GP:TGC77526.1;Name=TGC77526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458265.1;locus_tag=C9F09_25855;partial=true;product=XylR family transcriptional regulator;protein_id=TGC77526.1;start_range=.,1;transl_table=11 PYKB01001488.1 Genbank gene 973 1797 . - . ID=gene-C9F09_25860;Name=C9F09_25860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25860 PYKB01001488.1 Protein Homology CDS 973 1797 . - 0 ID=cds-TGC77527.1;Parent=gene-C9F09_25860;Dbxref=NCBI_GP:TGC77527.1;Name=TGC77527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=C9F09_25860;product=hypothetical protein;protein_id=TGC77527.1;transl_table=11 PYKB01001488.1 Genbank gene 1742 2113 . + . ID=gene-C9F09_25865;Name=C9F09_25865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25865 PYKB01001488.1 Protein Homology CDS 1742 2113 . + 0 ID=cds-TGC77529.1;Parent=gene-C9F09_25865;Dbxref=NCBI_GP:TGC77529.1;Name=TGC77529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000254414.1;locus_tag=C9F09_25865;product=hypothetical protein;protein_id=TGC77529.1;transl_table=11 PYKB01001488.1 Genbank gene 2113 2681 . + . ID=gene-C9F09_25870;Name=malS;end_range=2681,.;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=C9F09_25870;partial=true PYKB01001488.1 Protein Homology CDS 2113 2681 . + 0 ID=cds-TGC77528.1;Parent=gene-C9F09_25870;Dbxref=NCBI_GP:TGC77528.1;Name=TGC77528.1;Note=periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds;end_range=2681,.;gbkey=CDS;gene=malS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=C9F09_25870;partial=true;product=alpha-amylase;protein_id=TGC77528.1;transl_table=11 ##sequence-region PYKB01001114.1 1 2677 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001114.1 Genbank region 1 2677 . + . ID=PYKB01001114.1:1..2677;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001114.1 Genbank gene 1 215 . + . ID=gene-C9F09_18735;Name=C9F09_18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18735;partial=true;start_range=.,1 PYKB01001114.1 Protein Homology CDS 1 215 . + 2 ID=cds-TGC85629.1;Parent=gene-C9F09_18735;Dbxref=NCBI_GP:TGC85629.1;Name=TGC85629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=C9F09_18735;partial=true;product=hypothetical protein;protein_id=TGC85629.1;start_range=.,1;transl_table=11 PYKB01001114.1 Genbank gene 258 2345 . - . ID=gene-C9F09_18740;Name=C9F09_18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18740 PYKB01001114.1 Protein Homology CDS 258 2345 . - 0 ID=cds-TGC85630.1;Parent=gene-C9F09_18740;Dbxref=NCBI_GP:TGC85630.1;Name=TGC85630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462370.1;locus_tag=C9F09_18740;product=hypothetical protein;protein_id=TGC85630.1;transl_table=11 PYKB01001114.1 Genbank gene 2394 2677 . - . ID=gene-C9F09_18745;Name=C9F09_18745;end_range=2677,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18745;partial=true PYKB01001114.1 Protein Homology CDS 2394 2677 . - 2 ID=cds-TGC85631.1;Parent=gene-C9F09_18745;Dbxref=NCBI_GP:TGC85631.1;Name=TGC85631.1;Note=cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons;end_range=2677,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=C9F09_18745;partial=true;product=cAMP-activated global transcriptional regulator CRP;protein_id=TGC85631.1;transl_table=11 ##sequence-region PYKB01001158.1 1 2674 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001158.1 Genbank region 1 2674 . + . ID=PYKB01001158.1:1..2674;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001158.1 Genbank gene 1 1316 . - . ID=gene-C9F09_19580;Name=C9F09_19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19580;partial=true;start_range=.,1 PYKB01001158.1 Protein Homology CDS 1 1316 . - 0 ID=cds-TGC84571.1;Parent=gene-C9F09_19580;Dbxref=NCBI_GP:TGC84571.1;Name=TGC84571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=C9F09_19580;partial=true;product=L-fuculokinase;protein_id=TGC84571.1;start_range=.,1;transl_table=11 PYKB01001158.1 Genbank gene 1417 2674 . - . ID=gene-C9F09_19585;Name=C9F09_19585;end_range=2674,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19585;partial=true PYKB01001158.1 Protein Homology CDS 1417 2674 . - 1 ID=cds-TGC84572.1;Parent=gene-C9F09_19585;Dbxref=NCBI_GP:TGC84572.1;Name=TGC84572.1;end_range=2674,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=C9F09_19585;partial=true;product=L-fucose isomerase;protein_id=TGC84572.1;transl_table=11 ##sequence-region PYKB01001079.1 1 9607 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001079.1 Genbank region 1 9607 . + . ID=PYKB01001079.1:1..9607;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001079.1 Genbank gene 1 549 . + . ID=gene-C9F09_18005;Name=C9F09_18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18005;partial=true;start_range=.,1 PYKB01001079.1 Protein Homology CDS 1 549 . + 0 ID=cds-TGC86499.1;Parent=gene-C9F09_18005;Dbxref=NCBI_GP:TGC86499.1;Name=TGC86499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=C9F09_18005;partial=true;product=hydroxyethylthiazole kinase;protein_id=TGC86499.1;start_range=.,1;transl_table=11 PYKB01001079.1 Genbank gene 536 1336 . + . ID=gene-C9F09_18010;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=C9F09_18010 PYKB01001079.1 Protein Homology CDS 536 1336 . + 0 ID=cds-TGC86500.1;Parent=gene-C9F09_18010;Dbxref=NCBI_GP:TGC86500.1;Name=TGC86500.1;gbkey=CDS;gene=thiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=C9F09_18010;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=TGC86500.1;transl_table=11 PYKB01001079.1 Genbank gene 1372 2118 . + . ID=gene-C9F09_18015;Name=C9F09_18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18015 PYKB01001079.1 Protein Homology CDS 1372 2118 . + 0 ID=cds-TGC86501.1;Parent=gene-C9F09_18015;Dbxref=NCBI_GP:TGC86501.1;Name=TGC86501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456704.1;locus_tag=C9F09_18015;product=GntR family transcriptional regulator;protein_id=TGC86501.1;transl_table=11 PYKB01001079.1 Genbank gene 2092 3057 . - . ID=gene-C9F09_18020;Name=C9F09_18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18020 PYKB01001079.1 Protein Homology CDS 2092 3057 . - 0 ID=cds-TGC86502.1;Parent=gene-C9F09_18020;Dbxref=NCBI_GP:TGC86502.1;Name=TGC86502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=C9F09_18020;product=sugar kinase;protein_id=TGC86502.1;transl_table=11 PYKB01001079.1 Genbank gene 3054 4058 . - . ID=gene-C9F09_18025;Name=C9F09_18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18025 PYKB01001079.1 Protein Homology CDS 3054 4058 . - 0 ID=cds-TGC86503.1;Parent=gene-C9F09_18025;Dbxref=NCBI_GP:TGC86503.1;Name=TGC86503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=C9F09_18025;product=ADP-ribosylglycohydrolase family protein;protein_id=TGC86503.1;transl_table=11 PYKB01001079.1 Genbank gene 4055 5326 . - . ID=gene-C9F09_18030;Name=C9F09_18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18030 PYKB01001079.1 Protein Homology CDS 4055 5326 . - 0 ID=cds-TGC86504.1;Parent=gene-C9F09_18030;Dbxref=NCBI_GP:TGC86504.1;Name=TGC86504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456701.1;locus_tag=C9F09_18030;product=MFS transporter;protein_id=TGC86504.1;transl_table=11 PYKB01001079.1 Genbank gene 5580 6632 . + . ID=gene-C9F09_18035;Name=C9F09_18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18035 PYKB01001079.1 Protein Homology CDS 5580 6632 . + 0 ID=cds-TGC86505.1;Parent=gene-C9F09_18035;Dbxref=NCBI_GP:TGC86505.1;Name=TGC86505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456700.1;locus_tag=C9F09_18035;product=class I fructose-bisphosphate aldolase;protein_id=TGC86505.1;transl_table=11 PYKB01001079.1 Genbank gene 6685 7584 . - . ID=gene-C9F09_18040;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=C9F09_18040 PYKB01001079.1 Protein Homology CDS 6685 7584 . - 0 ID=cds-TGC86506.1;Parent=gene-C9F09_18040;Dbxref=NCBI_GP:TGC86506.1;Name=TGC86506.1;gbkey=CDS;gene=yegS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991989.1;locus_tag=C9F09_18040;product=lipid kinase YegS;protein_id=TGC86506.1;transl_table=11 PYKB01001079.1 Genbank gene 8149 8484 . + . ID=gene-C9F09_18045;Name=C9F09_18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18045 PYKB01001079.1 Protein Homology CDS 8149 8484 . + 0 ID=cds-TGC86507.1;Parent=gene-C9F09_18045;Dbxref=NCBI_GP:TGC86507.1;Name=TGC86507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456698.1;locus_tag=C9F09_18045;product=hypothetical protein;protein_id=TGC86507.1;transl_table=11 PYKB01001079.1 Genbank gene 8606 9022 . + . ID=gene-C9F09_18050;Name=C9F09_18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18050 PYKB01001079.1 Protein Homology CDS 8606 9022 . + 0 ID=cds-TGC86508.1;Parent=gene-C9F09_18050;Dbxref=NCBI_GP:TGC86508.1;Name=TGC86508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456697.1;locus_tag=C9F09_18050;product=CesT family type III secretion system chaperone;protein_id=TGC86508.1;transl_table=11 PYKB01001079.1 Genbank gene 9058 9607 . - . ID=gene-C9F09_18055;Name=C9F09_18055;end_range=9607,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18055;partial=true PYKB01001079.1 Protein Homology CDS 9058 9607 . - 1 ID=cds-TGC86509.1;Parent=gene-C9F09_18055;Dbxref=NCBI_GP:TGC86509.1;Name=TGC86509.1;end_range=9607,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=C9F09_18055;partial=true;product=non-LEE encoded effector protein NleB;protein_id=TGC86509.1;transl_table=11 ##sequence-region PYKB01000387.1 1 2670 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000387.1 Genbank region 1 2670 . + . ID=PYKB01000387.1:1..2670;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000387.1 Genbank gene 1 1312 . - . ID=gene-C9F09_04360;Name=C9F09_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04360;partial=true;start_range=.,1 PYKB01000387.1 Protein Homology CDS 1 1312 . - 0 ID=cds-TGC99885.1;Parent=gene-C9F09_04360;Dbxref=NCBI_GP:TGC99885.1;Name=TGC99885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=C9F09_04360;partial=true;product=peptidylprolyl isomerase;protein_id=TGC99885.1;start_range=.,1;transl_table=11 PYKB01000387.1 Genbank gene 1603 1875 . - . ID=gene-C9F09_04365;Name=C9F09_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04365 PYKB01000387.1 Protein Homology CDS 1603 1875 . - 0 ID=cds-TGC99886.1;Parent=gene-C9F09_04365;Dbxref=NCBI_GP:TGC99886.1;Name=TGC99886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1;locus_tag=C9F09_04365;product=DNA-binding protein HU-beta;protein_id=TGC99886.1;transl_table=11 PYKB01000387.1 Genbank pseudogene 2084 2670 . - . ID=gene-C9F09_04370;Name=C9F09_04370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04370;pseudo=true PYKB01000387.1 Protein Homology CDS 2084 2670 . - 2 ID=cds-C9F09_04370;Parent=gene-C9F09_04370;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308520.1;locus_tag=C9F09_04370;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000028.1 1 2668 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000028.1 Genbank region 1 2668 . + . ID=PYKB01000028.1:1..2668;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000028.1 Genbank pseudogene 1 1820 . + . ID=gene-C9F09_00325;Name=C9F09_00325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00325;pseudo=true PYKB01000028.1 Protein Homology CDS 1 1820 . + 2 ID=cds-C9F09_00325;Parent=gene-C9F09_00325;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=C9F09_00325;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000028.1 Genbank gene 2070 2668 . + . ID=gene-C9F09_00330;Name=C9F09_00330;end_range=2668,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00330;partial=true PYKB01000028.1 Protein Homology CDS 2070 2668 . + 0 ID=cds-TGD06898.1;Parent=gene-C9F09_00330;Dbxref=NCBI_GP:TGD06898.1;Name=TGD06898.1;end_range=2668,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=C9F09_00330;partial=true;product=LPS O-antigen length regulator;protein_id=TGD06898.1;transl_table=11 ##sequence-region PYKB01000703.1 1 2656 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000703.1 Genbank region 1 2656 . + . ID=PYKB01000703.1:1..2656;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000703.1 Genbank gene 1 314 . - . ID=gene-C9F09_10695;Name=C9F09_10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10695;partial=true;start_range=.,1 PYKB01000703.1 Protein Homology CDS 1 314 . - 0 ID=cds-TGC93663.1;Parent=gene-C9F09_10695;Dbxref=NCBI_GP:TGC93663.1;Name=TGC93663.1;Note=B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=C9F09_10695;partial=true;product=cytochrome B;protein_id=TGC93663.1;start_range=.,1;transl_table=11 PYKB01000703.1 Genbank gene 431 1231 . - . ID=gene-C9F09_10700;Name=C9F09_10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10700 PYKB01000703.1 Protein Homology CDS 431 1231 . - 0 ID=cds-TGC93664.1;Parent=gene-C9F09_10700;Dbxref=NCBI_GP:TGC93664.1;Name=TGC93664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455864.1;locus_tag=C9F09_10700;product=YdcF family protein;protein_id=TGC93664.1;transl_table=11 PYKB01000703.1 Genbank gene 1295 2656 . - . ID=gene-C9F09_10705;Name=C9F09_10705;end_range=2656,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10705;partial=true PYKB01000703.1 Protein Homology CDS 1295 2656 . - 0 ID=cds-TGC93665.1;Parent=gene-C9F09_10705;Dbxref=NCBI_GP:TGC93665.1;Name=TGC93665.1;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;end_range=2656,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=C9F09_10705;partial=true;product=ATP-dependent RNA helicase HrpA;protein_id=TGC93665.1;transl_table=11 ##sequence-region PYKB01001258.1 1 2654 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001258.1 Genbank region 1 2654 . + . ID=PYKB01001258.1:1..2654;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001258.1 Genbank pseudogene 1 194 . + . ID=gene-C9F09_21505;Name=C9F09_21505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21505;pseudo=true PYKB01001258.1 Protein Homology CDS 1 194 . + 2 ID=cds-C9F09_21505;Parent=gene-C9F09_21505;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000779217.1;locus_tag=C9F09_21505;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001258.1 Genbank gene 198 362 . + . ID=gene-C9F09_21510;Name=C9F09_21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21510 PYKB01001258.1 Protein Homology CDS 198 362 . + 0 ID=cds-TGC82295.1;Parent=gene-C9F09_21510;Dbxref=NCBI_GP:TGC82295.1;Name=TGC82295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497754.1;locus_tag=C9F09_21510;product=DUF2635 domain-containing protein;protein_id=TGC82295.1;transl_table=11 PYKB01001258.1 Genbank gene 352 1848 . + . ID=gene-C9F09_21515;Name=C9F09_21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21515 PYKB01001258.1 Protein Homology CDS 352 1848 . + 0 ID=cds-TGC82296.1;Parent=gene-C9F09_21515;Dbxref=NCBI_GP:TGC82296.1;Name=TGC82296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411654.1;locus_tag=C9F09_21515;product=phage tail protein;protein_id=TGC82296.1;transl_table=11 PYKB01001258.1 Genbank gene 1848 2204 . + . ID=gene-C9F09_21520;Name=C9F09_21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21520 PYKB01001258.1 Protein Homology CDS 1848 2204 . + 0 ID=cds-TGC82297.1;Parent=gene-C9F09_21520;Dbxref=NCBI_GP:TGC82297.1;Name=TGC82297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411655.1;locus_tag=C9F09_21520;product=phage tail protein;protein_id=TGC82297.1;transl_table=11 PYKB01001258.1 Genbank gene 2201 2527 . + . ID=gene-C9F09_21525;Name=C9F09_21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21525 PYKB01001258.1 Protein Homology CDS 2201 2527 . + 0 ID=cds-TGC82298.1;Parent=gene-C9F09_21525;Dbxref=NCBI_GP:TGC82298.1;Name=TGC82298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588853.1;locus_tag=C9F09_21525;product=phage tail assembly protein;protein_id=TGC82298.1;transl_table=11 ##sequence-region PYKB01001346.1 1 2653 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001346.1 Genbank region 1 2653 . + . ID=PYKB01001346.1:1..2653;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001346.1 Genbank gene 1 484 . + . ID=gene-C9F09_23160;Name=C9F09_23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23160;partial=true;start_range=.,1 PYKB01001346.1 Protein Homology CDS 1 484 . + 1 ID=cds-TGC80559.1;Parent=gene-C9F09_23160;Dbxref=NCBI_GP:TGC80559.1;Name=TGC80559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455391.1;locus_tag=C9F09_23160;partial=true;product=DNA-binding transcriptional repressor DeoR;protein_id=TGC80559.1;start_range=.,1;transl_table=11 PYKB01001346.1 Genbank gene 530 1732 . - . ID=gene-C9F09_23165;Name=C9F09_23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23165 PYKB01001346.1 Protein Homology CDS 530 1732 . - 0 ID=cds-TGC80560.1;Parent=gene-C9F09_23165;Dbxref=NCBI_GP:TGC80560.1;Name=TGC80560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455390.1;locus_tag=C9F09_23165;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=TGC80560.1;transl_table=11 PYKB01001346.1 Genbank gene 1976 2602 . + . ID=gene-C9F09_23170;Name=C9F09_23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23170 PYKB01001346.1 Protein Homology CDS 1976 2602 . + 0 ID=cds-TGC80561.1;Parent=gene-C9F09_23170;Dbxref=NCBI_GP:TGC80561.1;Name=TGC80561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631892.1;locus_tag=C9F09_23170;product=glutathione S-transferase;protein_id=TGC80561.1;transl_table=11 ##sequence-region PYKB01000219.1 1 2649 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000219.1 Genbank region 1 2649 . + . ID=PYKB01000219.1:1..2649;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000219.1 Genbank gene 1 377 . - . ID=gene-C9F09_02335;Name=C9F09_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02335;partial=true;start_range=.,1 PYKB01000219.1 Protein Homology CDS 1 377 . - 0 ID=cds-TGD03343.1;Parent=gene-C9F09_02335;Dbxref=NCBI_GP:TGD03343.1;Name=TGD03343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462000.3;locus_tag=C9F09_02335;partial=true;product=GntR family transcriptional regulator;protein_id=TGD03343.1;start_range=.,1;transl_table=11 PYKB01000219.1 Genbank gene 531 1262 . - . ID=gene-C9F09_02340;Name=C9F09_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02340 PYKB01000219.1 Protein Homology CDS 531 1262 . - 0 ID=cds-TGD03342.1;Parent=gene-C9F09_02340;Dbxref=NCBI_GP:TGD03342.1;Name=TGD03342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462001.1;locus_tag=C9F09_02340;product=hypothetical protein;protein_id=TGD03342.1;transl_table=11 PYKB01000219.1 Genbank gene 1407 2649 . - . ID=gene-C9F09_02345;Name=C9F09_02345;end_range=2649,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02345;partial=true PYKB01000219.1 Protein Homology CDS 1407 2649 . - 1 ID=cds-TGD03344.1;Parent=gene-C9F09_02345;Dbxref=NCBI_GP:TGD03344.1;Name=TGD03344.1;end_range=2649,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457479.1;locus_tag=C9F09_02345;partial=true;product=biosynthetic arginine decarboxylase;protein_id=TGD03344.1;transl_table=11 ##sequence-region PYKB01001650.1 1 2647 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001650.1 Genbank region 1 2647 . + . ID=PYKB01001650.1:1..2647;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001650.1 Genbank gene 148 1566 . - . ID=gene-C9F09_28795;Name=C9F09_28795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28795 PYKB01001650.1 Protein Homology CDS 148 1566 . - 0 ID=cds-TGC73552.1;Parent=gene-C9F09_28795;Dbxref=NCBI_GP:TGC73552.1;Name=TGC73552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=C9F09_28795;product=sugar porter family MFS transporter;protein_id=TGC73552.1;transl_table=11 PYKB01001650.1 Genbank gene 1920 2647 . - . ID=gene-C9F09_28800;Name=kduD;end_range=2647,.;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=C9F09_28800;partial=true PYKB01001650.1 Protein Homology CDS 1920 2647 . - 2 ID=cds-TGC73553.1;Parent=gene-C9F09_28800;Dbxref=NCBI_GP:TGC73553.1;Name=TGC73553.1;end_range=2647,.;gbkey=CDS;gene=kduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457412.1;locus_tag=C9F09_28800;partial=true;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=TGC73553.1;transl_table=11 ##sequence-region PYKB01000958.1 1 2642 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000958.1 Genbank region 1 2642 . + . ID=PYKB01000958.1:1..2642;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000958.1 Genbank gene 1 454 . - . ID=gene-C9F09_15855;Name=C9F09_15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15855;partial=true;start_range=.,1 PYKB01000958.1 Protein Homology CDS 1 454 . - 0 ID=cds-TGC89144.1;Parent=gene-C9F09_15855;Dbxref=NCBI_GP:TGC89144.1;Name=TGC89144.1;Note=with SbcC cleaves DNA hairpin structure%2C also has 5' single-strand endonuclease activity;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=C9F09_15855;partial=true;product=exonuclease subunit SbcD;protein_id=TGC89144.1;start_range=.,1;transl_table=11 PYKB01000958.1 Genbank gene 669 1358 . + . ID=gene-C9F09_15860;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=C9F09_15860 PYKB01000958.1 Protein Homology CDS 669 1358 . + 0 ID=cds-TGC89145.1;Parent=gene-C9F09_15860;Dbxref=NCBI_GP:TGC89145.1;Name=TGC89145.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=C9F09_15860;product=phosphate regulon transcriptional regulatory protein PhoB;protein_id=TGC89145.1;transl_table=11 PYKB01000958.1 Genbank gene 1428 2642 . + . ID=gene-C9F09_15865;Name=phoR;end_range=2642,.;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=C9F09_15865;partial=true PYKB01000958.1 Protein Homology CDS 1428 2642 . + 0 ID=cds-TGC89146.1;Parent=gene-C9F09_15865;Dbxref=NCBI_GP:TGC89146.1;Name=TGC89146.1;Note=membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB;end_range=2642,.;gbkey=CDS;gene=phoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=C9F09_15865;partial=true;product=two-component system sensor histidine kinase PhoR;protein_id=TGC89146.1;transl_table=11 ##sequence-region PYKB01001471.1 1 2640 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001471.1 Genbank region 1 2640 . + . ID=PYKB01001471.1:1..2640;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001471.1 Genbank gene 1 1417 . - . ID=gene-C9F09_25605;Name=C9F09_25605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25605;partial=true;start_range=.,1 PYKB01001471.1 Protein Homology CDS 1 1417 . - 0 ID=cds-TGC77822.1;Parent=gene-C9F09_25605;Dbxref=NCBI_GP:TGC77822.1;Name=TGC77822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=C9F09_25605;partial=true;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=TGC77822.1;start_range=.,1;transl_table=11 PYKB01001471.1 Genbank pseudogene 1424 2557 . - . ID=gene-C9F09_25610;Name=C9F09_25610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_25610;pseudo=true PYKB01001471.1 Protein Homology CDS 1424 2557 . - 0 ID=cds-C9F09_25610;Parent=gene-C9F09_25610;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=C9F09_25610;product=NADH-quinone oxidoreductase subunit M;pseudo=true;transl_table=11 ##sequence-region PYKB01000253.1 1 2632 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000253.1 Genbank region 1 2632 . + . ID=PYKB01000253.1:1..2632;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000253.1 Genbank gene 1 2132 . - . ID=gene-C9F09_02760;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=C9F09_02760;partial=true;start_range=.,1 PYKB01000253.1 Protein Homology CDS 1 2132 . - 0 ID=cds-TGD02526.1;Parent=gene-C9F09_02760;Dbxref=NCBI_GP:TGD02526.1;Name=TGD02526.1;gbkey=CDS;gene=recB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002413833.1;locus_tag=C9F09_02760;partial=true;product=exodeoxyribonuclease V subunit beta;protein_id=TGD02526.1;start_range=.,1;transl_table=11 PYKB01000253.1 Genbank gene 2125 2632 . - . ID=gene-C9F09_02765;Name=C9F09_02765;end_range=2632,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02765;partial=true PYKB01000253.1 Protein Homology CDS 2125 2632 . - 1 ID=cds-TGD02527.1;Parent=gene-C9F09_02765;Dbxref=NCBI_GP:TGD02527.1;Name=TGD02527.1;end_range=2632,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457388.1;locus_tag=C9F09_02765;partial=true;product=hypothetical protein;protein_id=TGD02527.1;transl_table=11 ##sequence-region PYKB01001413.1 1 9351 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001413.1 Genbank region 1 9351 . + . ID=PYKB01001413.1:1..9351;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001413.1 Genbank gene 122 667 . - . ID=gene-C9F09_24260;Name=C9F09_24260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24260 PYKB01001413.1 Protein Homology CDS 122 667 . - 0 ID=cds-TGC79157.1;Parent=gene-C9F09_24260;Dbxref=NCBI_GP:TGC79157.1;Name=TGC79157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456242.1;locus_tag=C9F09_24260;product=chorismate mutase;protein_id=TGC79157.1;transl_table=11 PYKB01001413.1 Genbank gene 983 1231 . + . ID=gene-C9F09_24265;Name=C9F09_24265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24265 PYKB01001413.1 Protein Homology CDS 983 1231 . + 0 ID=cds-TGC79158.1;Parent=gene-C9F09_24265;Dbxref=NCBI_GP:TGC79158.1;Name=TGC79158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=C9F09_24265;product=histidine kinase;protein_id=TGC79158.1;transl_table=11 PYKB01001413.1 Genbank gene 1486 2334 . - . ID=gene-C9F09_24270;Name=C9F09_24270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24270 PYKB01001413.1 Protein Homology CDS 1486 2334 . - 0 ID=cds-TGC79159.1;Parent=gene-C9F09_24270;Dbxref=NCBI_GP:TGC79159.1;Name=TGC79159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=C9F09_24270;product=transcriptional regulator;protein_id=TGC79159.1;transl_table=11 PYKB01001413.1 Genbank gene 2403 2996 . - . ID=gene-C9F09_24275;Name=C9F09_24275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24275 PYKB01001413.1 Protein Homology CDS 2403 2996 . - 0 ID=cds-TGC79165.1;Parent=gene-C9F09_24275;Dbxref=NCBI_GP:TGC79165.1;Name=TGC79165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=C9F09_24275;product=LuxR family transcriptional regulator;protein_id=TGC79165.1;transl_table=11 PYKB01001413.1 Genbank gene 3141 3929 . - . ID=gene-C9F09_24280;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=C9F09_24280 PYKB01001413.1 Protein Homology CDS 3141 3929 . - 0 ID=cds-TGC79160.1;Parent=gene-C9F09_24280;Dbxref=NCBI_GP:TGC79160.1;Name=TGC79160.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=C9F09_24280;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=TGC79160.1;transl_table=11 PYKB01001413.1 Genbank gene 4038 4688 . - . ID=gene-C9F09_24285;Name=C9F09_24285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24285 PYKB01001413.1 Protein Homology CDS 4038 4688 . - 0 ID=cds-TGC79161.1;Parent=gene-C9F09_24285;Dbxref=NCBI_GP:TGC79161.1;Name=TGC79161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456248.1;locus_tag=C9F09_24285;product=metal-binding protein ZinT;protein_id=TGC79161.1;transl_table=11 PYKB01001413.1 Genbank gene 4797 4873 . - . ID=gene-C9F09_24290;Name=C9F09_24290;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_24290 PYKB01001413.1 tRNAscan-SE tRNA 4797 4873 . - . ID=rna-C9F09_24290;Parent=gene-C9F09_24290;anticodon=(pos:complement(4837..4839));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_24290;product=tRNA-Arg PYKB01001413.1 tRNAscan-SE exon 4797 4873 . - . ID=exon-C9F09_24290-1;Parent=rna-C9F09_24290;anticodon=(pos:complement(4837..4839));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_24290;product=tRNA-Arg PYKB01001413.1 Genbank gene 4882 5208 . - . ID=gene-C9F09_24295;Name=C9F09_24295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24295 PYKB01001413.1 Protein Homology CDS 4882 5208 . - 0 ID=cds-TGC79162.1;Parent=gene-C9F09_24295;Dbxref=NCBI_GP:TGC79162.1;Name=TGC79162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=C9F09_24295;product=four-helix bundle copper-binding protein;protein_id=TGC79162.1;transl_table=11 PYKB01001413.1 Genbank gene 5402 6535 . + . ID=gene-C9F09_24300;Name=C9F09_24300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24300 PYKB01001413.1 Protein Homology CDS 5402 6535 . + 0 ID=cds-TGC79163.1;Parent=gene-C9F09_24300;Dbxref=NCBI_GP:TGC79163.1;Name=TGC79163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456250.1;locus_tag=C9F09_24300;product=mechanosensitive ion channel family protein;protein_id=TGC79163.1;transl_table=11 PYKB01001413.1 Genbank gene 6617 7207 . - . ID=gene-C9F09_24305;Name=C9F09_24305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24305 PYKB01001413.1 Protein Homology CDS 6617 7207 . - 0 ID=cds-TGC79164.1;Parent=gene-C9F09_24305;Dbxref=NCBI_GP:TGC79164.1;Name=TGC79164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=C9F09_24305;product=peptide ABC transporter ATP-binding protein;protein_id=TGC79164.1;transl_table=11 PYKB01001413.1 Genbank pseudogene 7201 7998 . - . ID=gene-C9F09_24310;Name=C9F09_24310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_24310;pseudo=true PYKB01001413.1 Protein Homology CDS 7201 7998 . - 0 ID=cds-C9F09_24310;Parent=gene-C9F09_24310;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=C9F09_24310;product=peptide ABC transporter ATP-binding protein;pseudo=true;transl_table=11 PYKB01001413.1 Genbank pseudogene 7995 8804 . - . ID=gene-C9F09_24315;Name=C9F09_24315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_24315;pseudo=true PYKB01001413.1 Protein Homology CDS 7995 8804 . - 0 ID=cds-C9F09_24315;Parent=gene-C9F09_24315;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456253.1;locus_tag=C9F09_24315;product=peptide ABC transporter permease;pseudo=true;transl_table=11 PYKB01001413.1 Genbank gene 8794 9351 . - . ID=gene-C9F09_24320;Name=C9F09_24320;end_range=9351,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24320;partial=true PYKB01001413.1 Protein Homology CDS 8794 9351 . - 0 ID=cds-TGC79166.1;Parent=gene-C9F09_24320;Dbxref=NCBI_GP:TGC79166.1;Name=TGC79166.1;end_range=9351,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456254.1;locus_tag=C9F09_24320;partial=true;product=peptide ABC transporter permease;protein_id=TGC79166.1;transl_table=11 ##sequence-region PYKB01000932.1 1 2629 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000932.1 Genbank region 1 2629 . + . ID=PYKB01000932.1:1..2629;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000932.1 Genbank gene 1 630 . - . ID=gene-C9F09_15375;Name=C9F09_15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15375;partial=true;start_range=.,1 PYKB01000932.1 Protein Homology CDS 1 630 . - 0 ID=cds-TGC89675.1;Parent=gene-C9F09_15375;Dbxref=NCBI_GP:TGC89675.1;Name=TGC89675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463399.3;locus_tag=C9F09_15375;partial=true;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=TGC89675.1;start_range=.,1;transl_table=11 PYKB01000932.1 Genbank gene 627 1688 . - . ID=gene-C9F09_15380;Name=C9F09_15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15380 PYKB01000932.1 Protein Homology CDS 627 1688 . - 0 ID=cds-TGC89674.1;Parent=gene-C9F09_15380;Dbxref=NCBI_GP:TGC89674.1;Name=TGC89674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=C9F09_15380;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=TGC89674.1;transl_table=11 PYKB01000932.1 Genbank gene 1701 2537 . - . ID=gene-C9F09_15385;Name=C9F09_15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15385 PYKB01000932.1 Protein Homology CDS 1701 2537 . - 0 ID=cds-TGC89676.1;Parent=gene-C9F09_15385;Dbxref=NCBI_GP:TGC89676.1;Name=TGC89676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463397.1;locus_tag=C9F09_15385;product=PTS mannose transporter subunit IID;protein_id=TGC89676.1;transl_table=11 ##sequence-region PYKB01000983.1 1 2625 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000983.1 Genbank region 1 2625 . + . ID=PYKB01000983.1:1..2625;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000983.1 Genbank gene 1 511 . + . ID=gene-C9F09_16340;Name=C9F09_16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16340;partial=true;start_range=.,1 PYKB01000983.1 Protein Homology CDS 1 511 . + 1 ID=cds-TGC88513.1;Parent=gene-C9F09_16340;Dbxref=NCBI_GP:TGC88513.1;Name=TGC88513.1;Note=with malEFG is involved in import of maltose/maltodextrin;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=C9F09_16340;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGC88513.1;start_range=.,1;transl_table=11 PYKB01000983.1 Genbank gene 600 1958 . + . ID=gene-C9F09_16345;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=C9F09_16345 PYKB01000983.1 Protein Homology CDS 600 1958 . + 0 ID=cds-TGC88514.1;Parent=gene-C9F09_16345;Dbxref=NCBI_GP:TGC88514.1;Name=TGC88514.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;gene=lamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=C9F09_16345;product=maltoporin;protein_id=TGC88514.1;transl_table=11 PYKB01000983.1 Genbank pseudogene 2122 2553 . + . ID=gene-C9F09_16350;Name=C9F09_16350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16350;pseudo=true PYKB01000983.1 Protein Homology CDS 2122 2553 . + 0 ID=cds-C9F09_16350;Parent=gene-C9F09_16350;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458530.1;locus_tag=C9F09_16350;product=maltose operon protein MalM;pseudo=true;transl_table=11 ##sequence-region PYKB01001416.1 1 2623 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001416.1 Genbank region 1 2623 . + . ID=PYKB01001416.1:1..2623;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001416.1 Genbank gene 124 1092 . - . ID=gene-C9F09_24360;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=C9F09_24360 PYKB01001416.1 Protein Homology CDS 124 1092 . - 0 ID=cds-TGC79095.1;Parent=gene-C9F09_24360;Dbxref=NCBI_GP:TGC79095.1;Name=TGC79095.1;Note=catalyzes the formation of serine from O-phosphoserine;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458986.1;locus_tag=C9F09_24360;product=phosphoserine phosphatase;protein_id=TGC79095.1;transl_table=11 PYKB01001416.1 Genbank gene 1092 1241 . - . ID=gene-C9F09_24365;Name=C9F09_24365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24365 PYKB01001416.1 Protein Homology CDS 1092 1241 . - 0 ID=cds-TGC79096.1;Parent=gene-C9F09_24365;Dbxref=NCBI_GP:TGC79096.1;Name=TGC79096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541498.1;locus_tag=C9F09_24365;product=phosphoserine phosphatase;protein_id=TGC79096.1;transl_table=11 PYKB01001416.1 Genbank gene 1209 1853 . + . ID=gene-C9F09_24370;Name=C9F09_24370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24370 PYKB01001416.1 Protein Homology CDS 1209 1853 . + 0 ID=cds-TGC79097.1;Parent=gene-C9F09_24370;Dbxref=NCBI_GP:TGC79097.1;Name=TGC79097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458985.1;locus_tag=C9F09_24370;product=protein Smp;protein_id=TGC79097.1;transl_table=11 PYKB01001416.1 Genbank gene 1887 2623 . + . ID=gene-C9F09_24375;Name=lplA;end_range=2623,.;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=C9F09_24375;partial=true PYKB01001416.1 Protein Homology CDS 1887 2623 . + 0 ID=cds-TGC79098.1;Parent=gene-C9F09_24375;Dbxref=NCBI_GP:TGC79098.1;Name=TGC79098.1;end_range=2623,.;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=C9F09_24375;partial=true;product=lipoate-protein ligase LplA;protein_id=TGC79098.1;transl_table=11 ##sequence-region PYKB01001755.1 1 2622 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001755.1 Genbank region 1 2622 . + . ID=PYKB01001755.1:1..2622;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001755.1 Genbank gene 1 683 . + . ID=gene-C9F09_30715;Name=C9F09_30715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30715;partial=true;start_range=.,1 PYKB01001755.1 Protein Homology CDS 1 683 . + 2 ID=cds-TGC70344.1;Parent=gene-C9F09_30715;Dbxref=NCBI_GP:TGC70344.1;Name=TGC70344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458392.1;locus_tag=C9F09_30715;partial=true;product=gluconate transporter;protein_id=TGC70344.1;start_range=.,1;transl_table=11 PYKB01001755.1 Genbank pseudogene 802 2571 . - . ID=gene-C9F09_30720;Name=C9F09_30720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_30720;pseudo=true PYKB01001755.1 Protein Homology CDS 802 2571 . - 0 ID=cds-C9F09_30720;Parent=gene-C9F09_30720;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458391.1;locus_tag=C9F09_30720;product=4-alpha-glucanotransferase;pseudo=true;transl_table=11 ##sequence-region PYKB01001585.1 1 2613 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001585.1 Genbank region 1 2613 . + . ID=PYKB01001585.1:1..2613;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001585.1 Genbank pseudogene 35 2164 . + . ID=gene-C9F09_27860;Name=C9F09_27860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_27860;pseudo=true PYKB01001585.1 Protein Homology CDS 35 2164 . + 0 ID=cds-C9F09_27860;Parent=gene-C9F09_27860;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077109.1;locus_tag=C9F09_27860;product=thiosulfate reductase PhsA;pseudo=true;transl_table=11 PYKB01001585.1 Genbank gene 2179 2613 . + . ID=gene-C9F09_27865;Name=phsB;end_range=2613,.;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=C9F09_27865;partial=true PYKB01001585.1 Protein Homology CDS 2179 2613 . + 0 ID=cds-TGC75122.1;Parent=gene-C9F09_27865;Dbxref=NCBI_GP:TGC75122.1;Name=TGC75122.1;end_range=2613,.;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456612.1;locus_tag=C9F09_27865;partial=true;product=thiosulfate reductase electron transport protein PhsB;protein_id=TGC75122.1;transl_table=11 ##sequence-region PYKB01000868.1 1 2603 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000868.1 Genbank region 1 2603 . + . ID=PYKB01000868.1:1..2603;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000868.1 Genbank gene 1 230 . - . ID=gene-C9F09_14065;Name=C9F09_14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14065;partial=true;start_range=.,1 PYKB01000868.1 Protein Homology CDS 1 230 . - 0 ID=cds-TGC90841.1;Parent=gene-C9F09_14065;Dbxref=NCBI_GP:TGC90841.1;Name=TGC90841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663292.1;locus_tag=C9F09_14065;partial=true;product=thiol:disulfide interchange protein;protein_id=TGC90841.1;start_range=.,1;transl_table=11 PYKB01000868.1 Genbank gene 411 878 . - . ID=gene-C9F09_14070;Name=C9F09_14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14070 PYKB01000868.1 Protein Homology CDS 411 878 . - 0 ID=cds-TGC90838.1;Parent=gene-C9F09_14070;Dbxref=NCBI_GP:TGC90838.1;Name=TGC90838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750458.1;locus_tag=C9F09_14070;product=hypothetical protein;protein_id=TGC90838.1;transl_table=11 PYKB01000868.1 Genbank gene 1578 2015 . - . ID=gene-C9F09_14075;Name=C9F09_14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14075 PYKB01000868.1 Protein Homology CDS 1578 2015 . - 0 ID=cds-TGC90839.1;Parent=gene-C9F09_14075;Dbxref=NCBI_GP:TGC90839.1;Name=TGC90839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000191852.1;locus_tag=C9F09_14075;product=invasin;protein_id=TGC90839.1;transl_table=11 PYKB01000868.1 Genbank gene 2035 2603 . - . ID=gene-C9F09_14080;Name=C9F09_14080;end_range=2603,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14080;partial=true PYKB01000868.1 Protein Homology CDS 2035 2603 . - 2 ID=cds-TGC90840.1;Parent=gene-C9F09_14080;Dbxref=NCBI_GP:TGC90840.1;Name=TGC90840.1;end_range=2603,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000383072.1;locus_tag=C9F09_14080;partial=true;product=pilin outer membrane usher protein SafC;protein_id=TGC90840.1;transl_table=11 ##sequence-region PYKB01001696.1 1 2602 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001696.1 Genbank region 1 2602 . + . ID=PYKB01001696.1:1..2602;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001696.1 Genbank gene 1 259 . + . ID=gene-C9F09_29640;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=C9F09_29640;partial=true;start_range=.,1 PYKB01001696.1 Protein Homology CDS 1 259 . + 1 ID=cds-TGC72197.1;Parent=gene-C9F09_29640;Dbxref=NCBI_GP:TGC72197.1;Name=TGC72197.1;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;gbkey=CDS;gene=hemA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456287.1;locus_tag=C9F09_29640;partial=true;product=glutamyl-tRNA reductase;protein_id=TGC72197.1;start_range=.,1;transl_table=11 PYKB01001696.1 Genbank gene 300 1382 . + . ID=gene-C9F09_29645;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=C9F09_29645 PYKB01001696.1 Protein Homology CDS 300 1382 . + 0 ID=cds-TGC72198.1;Parent=gene-C9F09_29645;Dbxref=NCBI_GP:TGC72198.1;Name=TGC72198.1;gbkey=CDS;gene=prfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=C9F09_29645;product=peptide chain release factor 1;protein_id=TGC72198.1;transl_table=11 PYKB01001696.1 Genbank gene 1382 2215 . + . ID=gene-C9F09_29650;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=C9F09_29650 PYKB01001696.1 Protein Homology CDS 1382 2215 . + 0 ID=cds-TGC72199.1;Parent=gene-C9F09_29650;Dbxref=NCBI_GP:TGC72199.1;Name=TGC72199.1;gbkey=CDS;gene=prmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=C9F09_29650;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=TGC72199.1;transl_table=11 PYKB01001696.1 Genbank gene 2212 2601 . + . ID=gene-C9F09_29655;Name=C9F09_29655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29655 PYKB01001696.1 Protein Homology CDS 2212 2601 . + 0 ID=cds-TGC72200.1;Parent=gene-C9F09_29655;Dbxref=NCBI_GP:TGC72200.1;Name=TGC72200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456284.1;locus_tag=C9F09_29655;product=hypothetical protein;protein_id=TGC72200.1;transl_table=11 ##sequence-region PYKB01000982.1 1 2600 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000982.1 Genbank region 1 2600 . + . ID=PYKB01000982.1:1..2600;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000982.1 Genbank gene 1 587 . - . ID=gene-C9F09_16320;Name=C9F09_16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16320;partial=true;start_range=.,1 PYKB01000982.1 Protein Homology CDS 1 587 . - 0 ID=cds-TGC88581.1;Parent=gene-C9F09_16320;Dbxref=NCBI_GP:TGC88581.1;Name=TGC88581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418512.1;locus_tag=C9F09_16320;partial=true;product=allose ABC transporter;protein_id=TGC88581.1;start_range=.,1;transl_table=11 PYKB01000982.1 Genbank gene 650 1540 . - . ID=gene-C9F09_16325;Name=C9F09_16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16325 PYKB01000982.1 Protein Homology CDS 650 1540 . - 0 ID=cds-TGC88578.1;Parent=gene-C9F09_16325;Dbxref=NCBI_GP:TGC88578.1;Name=TGC88578.1;Note=involved in rpiB and als operon repression;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418513.4;locus_tag=C9F09_16325;product=transcriptional regulator;protein_id=TGC88578.1;transl_table=11 PYKB01000982.1 Genbank gene 1900 2349 . + . ID=gene-C9F09_16330;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=C9F09_16330 PYKB01000982.1 Protein Homology CDS 1900 2349 . + 0 ID=cds-TGC88579.1;Parent=gene-C9F09_16330;Dbxref=NCBI_GP:TGC88579.1;Name=TGC88579.1;gbkey=CDS;gene=rpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418514.1;locus_tag=C9F09_16330;product=ribose 5-phosphate isomerase B;protein_id=TGC88579.1;transl_table=11 PYKB01000982.1 Genbank gene 2479 2600 . - . ID=gene-C9F09_16335;Name=C9F09_16335;end_range=2600,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16335;partial=true PYKB01000982.1 Protein Homology CDS 2479 2600 . - 2 ID=cds-TGC88580.1;Parent=gene-C9F09_16335;Dbxref=NCBI_GP:TGC88580.1;Name=TGC88580.1;end_range=2600,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458587.1;locus_tag=C9F09_16335;partial=true;product=VOC family protein;protein_id=TGC88580.1;transl_table=11 ##sequence-region PYKB01001574.1 1 2585 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001574.1 Genbank region 1 2585 . + . ID=PYKB01001574.1:1..2585;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001574.1 Genbank gene 182 1069 . + . ID=gene-C9F09_27485;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=C9F09_27485 PYKB01001574.1 Protein Homology CDS 182 1069 . + 0 ID=cds-TGC75446.1;Parent=gene-C9F09_27485;Dbxref=NCBI_GP:TGC75446.1;Name=TGC75446.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=C9F09_27485;product=flagellar motor stator protein MotA;protein_id=TGC75446.1;transl_table=11 PYKB01001574.1 Genbank gene 1066 1995 . + . ID=gene-C9F09_27490;Name=C9F09_27490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27490 PYKB01001574.1 Protein Homology CDS 1066 1995 . + 0 ID=cds-TGC75447.1;Parent=gene-C9F09_27490;Dbxref=NCBI_GP:TGC75447.1;Name=TGC75447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=C9F09_27490;product=motility protein B;protein_id=TGC75447.1;transl_table=11 PYKB01001574.1 Genbank gene 2000 2585 . + . ID=gene-C9F09_27495;Name=C9F09_27495;end_range=2585,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27495;partial=true PYKB01001574.1 Protein Homology CDS 2000 2585 . + 0 ID=cds-TGC75448.1;Parent=gene-C9F09_27495;Dbxref=NCBI_GP:TGC75448.1;Name=TGC75448.1;end_range=2585,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456487.1;locus_tag=C9F09_27495;partial=true;product=chemotaxis protein CheA;protein_id=TGC75448.1;transl_table=11 ##sequence-region PYKB01000956.1 1 2575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000956.1 Genbank region 1 2575 . + . ID=PYKB01000956.1:1..2575;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000956.1 Genbank gene 1 127 . - . ID=gene-C9F09_15820;Name=C9F09_15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15820;partial=true;start_range=.,1 PYKB01000956.1 Protein Homology CDS 1 127 . - 0 ID=cds-TGC89152.1;Parent=gene-C9F09_15820;Dbxref=NCBI_GP:TGC89152.1;Name=TGC89152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308885.1;locus_tag=C9F09_15820;partial=true;product=structural protein;protein_id=TGC89152.1;start_range=.,1;transl_table=11 PYKB01000956.1 cmsearch riboswitch 392 536 . + . ID=id-PYKB01000956.1:392..536;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF01055,COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PYKB01000956.1 Genbank gene 524 1513 . + . ID=gene-C9F09_15825;Name=C9F09_15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15825 PYKB01000956.1 Protein Homology CDS 524 1513 . + 0 ID=cds-TGC89153.1;Parent=gene-C9F09_15825;Dbxref=NCBI_GP:TGC89153.1;Name=TGC89153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455343.1;locus_tag=C9F09_15825;product=cyclic pyranopterin monophosphate synthase;protein_id=TGC89153.1;transl_table=11 PYKB01000956.1 Genbank gene 1535 2047 . + . ID=gene-C9F09_15830;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=C9F09_15830 PYKB01000956.1 Protein Homology CDS 1535 2047 . + 0 ID=cds-TGC89154.1;Parent=gene-C9F09_15830;Dbxref=NCBI_GP:TGC89154.1;Name=TGC89154.1;gbkey=CDS;gene=moaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=C9F09_15830;product=molybdenum cofactor biosynthesis protein B;protein_id=TGC89154.1;transl_table=11 PYKB01000956.1 Genbank gene 2050 2575 . + . ID=gene-C9F09_15835;Name=moaC;end_range=2575,.;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=C9F09_15835;partial=true PYKB01000956.1 Protein Homology CDS 2050 2575 . + 0 ID=cds-TGC89155.1;Parent=gene-C9F09_15835;Dbxref=NCBI_GP:TGC89155.1;Name=TGC89155.1;end_range=2575,.;gbkey=CDS;gene=moaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=C9F09_15835;partial=true;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=TGC89155.1;transl_table=11 ##sequence-region PYKB01000613.1 1 9338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000613.1 Genbank region 1 9338 . + . ID=PYKB01000613.1:1..9338;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000613.1 Genbank gene 1 745 . - . ID=gene-C9F09_09045;Name=C9F09_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09045;partial=true;start_range=.,1 PYKB01000613.1 Protein Homology CDS 1 745 . - 0 ID=cds-TGC95099.1;Parent=gene-C9F09_09045;Dbxref=NCBI_GP:TGC95099.1;Name=TGC95099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=C9F09_09045;partial=true;product=EamA family transporter;protein_id=TGC95099.1;start_range=.,1;transl_table=11 PYKB01000613.1 Genbank gene 826 1674 . - . ID=gene-C9F09_09050;Name=C9F09_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09050 PYKB01000613.1 Protein Homology CDS 826 1674 . - 0 ID=cds-TGC95100.1;Parent=gene-C9F09_09050;Dbxref=NCBI_GP:TGC95100.1;Name=TGC95100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=C9F09_09050;product=NAD(P)-dependent oxidoreductase;protein_id=TGC95100.1;transl_table=11 PYKB01000613.1 Genbank gene 1762 2148 . + . ID=gene-C9F09_09055;Name=C9F09_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09055 PYKB01000613.1 Protein Homology CDS 1762 2148 . + 0 ID=cds-TGC95101.1;Parent=gene-C9F09_09055;Dbxref=NCBI_GP:TGC95101.1;Name=TGC95101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458838.1;locus_tag=C9F09_09055;product=transcriptional regulator;protein_id=TGC95101.1;transl_table=11 PYKB01000613.1 Genbank gene 2206 4149 . - . ID=gene-C9F09_09060;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=C9F09_09060 PYKB01000613.1 Protein Homology CDS 2206 4149 . - 0 ID=cds-TGC95102.1;Parent=gene-C9F09_09060;Dbxref=NCBI_GP:TGC95102.1;Name=TGC95102.1;Note=periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;gbkey=CDS;gene=cpdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=C9F09_09060;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=TGC95102.1;transl_table=11 PYKB01000613.1 Genbank gene 4162 4383 . - . ID=gene-C9F09_09065;Name=C9F09_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09065 PYKB01000613.1 Protein Homology CDS 4162 4383 . - 0 ID=cds-TGC95103.1;Parent=gene-C9F09_09065;Dbxref=NCBI_GP:TGC95103.1;Name=TGC95103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001520310.1;locus_tag=C9F09_09065;product=hypothetical protein;protein_id=TGC95103.1;transl_table=11 PYKB01000613.1 Genbank gene 4417 5157 . + . ID=gene-C9F09_09070;Name=C9F09_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09070 PYKB01000613.1 Protein Homology CDS 4417 5157 . + 0 ID=cds-TGC95104.1;Parent=gene-C9F09_09070;Dbxref=NCBI_GP:TGC95104.1;Name=TGC95104.1;Note=catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=C9F09_09070;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=TGC95104.1;transl_table=11 PYKB01000613.1 Genbank gene 5147 5704 . - . ID=gene-C9F09_09075;Name=C9F09_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09075 PYKB01000613.1 Protein Homology CDS 5147 5704 . - 0 ID=cds-TGC95105.1;Parent=gene-C9F09_09075;Dbxref=NCBI_GP:TGC95105.1;Name=TGC95105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458841.1;locus_tag=C9F09_09075;product=YtfJ family protein;protein_id=TGC95105.1;transl_table=11 PYKB01000613.1 Genbank gene 5718 5897 . - . ID=gene-C9F09_09080;Name=C9F09_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09080 PYKB01000613.1 Protein Homology CDS 5718 5897 . - 0 ID=cds-TGC95110.1;Parent=gene-C9F09_09080;Dbxref=NCBI_GP:TGC95110.1;Name=TGC95110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219547.1;locus_tag=C9F09_09080;product=hypothetical protein;protein_id=TGC95110.1;transl_table=11 PYKB01000613.1 Genbank gene 6031 6237 . + . ID=gene-C9F09_09085;Name=C9F09_09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09085 PYKB01000613.1 Protein Homology CDS 6031 6237 . + 0 ID=cds-TGC95106.1;Parent=gene-C9F09_09085;Dbxref=NCBI_GP:TGC95106.1;Name=TGC95106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458842.2;locus_tag=C9F09_09085;product=DUF1107 domain-containing protein;protein_id=TGC95106.1;transl_table=11 PYKB01000613.1 Genbank gene 6322 7665 . - . ID=gene-C9F09_09090;Name=C9F09_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09090 PYKB01000613.1 Protein Homology CDS 6322 7665 . - 0 ID=cds-TGC95107.1;Parent=gene-C9F09_09090;Dbxref=NCBI_GP:TGC95107.1;Name=TGC95107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458844.1;locus_tag=C9F09_09090;product=hypothetical protein;protein_id=TGC95107.1;transl_table=11 PYKB01000613.1 Genbank gene 7848 8486 . - . ID=gene-C9F09_09095;Name=C9F09_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09095 PYKB01000613.1 Protein Homology CDS 7848 8486 . - 0 ID=cds-TGC95108.1;Parent=gene-C9F09_09095;Dbxref=NCBI_GP:TGC95108.1;Name=TGC95108.1;Note=this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458845.1;locus_tag=C9F09_09095;product=peptide-methionine (S)-S-oxide reductase;protein_id=TGC95108.1;transl_table=11 PYKB01000613.1 Genbank gene 8699 9338 . + . ID=gene-C9F09_09100;Name=tamA;end_range=9338,.;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=C9F09_09100;partial=true PYKB01000613.1 Protein Homology CDS 8699 9338 . + 0 ID=cds-TGC95109.1;Parent=gene-C9F09_09100;Dbxref=NCBI_GP:TGC95109.1;Name=TGC95109.1;end_range=9338,.;gbkey=CDS;gene=tamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458846.1;locus_tag=C9F09_09100;partial=true;product=autotransporter assembly complex protein TamA;protein_id=TGC95109.1;transl_table=11 ##sequence-region PYKB01001564.1 1 2572 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001564.1 Genbank region 1 2572 . + . ID=PYKB01001564.1:1..2572;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001564.1 Genbank gene 1 290 . + . ID=gene-C9F09_27305;Name=C9F09_27305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27305;partial=true;start_range=.,1 PYKB01001564.1 Protein Homology CDS 1 290 . + 2 ID=cds-TGC75661.1;Parent=gene-C9F09_27305;Dbxref=NCBI_GP:TGC75661.1;Name=TGC75661.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=C9F09_27305;partial=true;product=DNA polymerase III subunit beta;protein_id=TGC75661.1;start_range=.,1;transl_table=11 PYKB01001564.1 Genbank gene 438 1511 . + . ID=gene-C9F09_27310;Name=C9F09_27310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27310 PYKB01001564.1 Protein Homology CDS 438 1511 . + 0 ID=cds-TGC75662.1;Parent=gene-C9F09_27310;Dbxref=NCBI_GP:TGC75662.1;Name=TGC75662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=C9F09_27310;product=DNA replication and repair protein RecF;protein_id=TGC75662.1;transl_table=11 PYKB01001564.1 Genbank gene 1540 2572 . + . ID=gene-C9F09_27315;Name=C9F09_27315;end_range=2572,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27315;partial=true PYKB01001564.1 Protein Homology CDS 1540 2572 . + 0 ID=cds-TGC75663.1;Parent=gene-C9F09_27315;Dbxref=NCBI_GP:TGC75663.1;Name=TGC75663.1;end_range=2572,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458107.1;locus_tag=C9F09_27315;partial=true;product=hypothetical protein;protein_id=TGC75663.1;transl_table=11 ##sequence-region PYKB01001749.1 1 2559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001749.1 Genbank region 1 2559 . + . ID=PYKB01001749.1:1..2559;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001749.1 Genbank gene 1 820 . - . ID=gene-C9F09_30660;Name=C9F09_30660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30660;partial=true;start_range=.,1 PYKB01001749.1 Protein Homology CDS 1 820 . - 0 ID=cds-TGC70519.1;Parent=gene-C9F09_30660;Dbxref=NCBI_GP:TGC70519.1;Name=TGC70519.1;Note=sigma-54 dependent activator family protein%3B activates the prpBCDE operon;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=C9F09_30660;partial=true;product=propionate catabolism operon regulatory protein PrpR;protein_id=TGC70519.1;start_range=.,1;transl_table=11 PYKB01001749.1 Genbank gene 1086 1973 . + . ID=gene-C9F09_30665;Name=C9F09_30665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30665 PYKB01001749.1 Protein Homology CDS 1086 1973 . + 0 ID=cds-TGC70520.1;Parent=gene-C9F09_30665;Dbxref=NCBI_GP:TGC70520.1;Name=TGC70520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454963.1;locus_tag=C9F09_30665;product=methylisocitrate lyase;protein_id=TGC70520.1;transl_table=11 PYKB01001749.1 Genbank gene 2096 2559 . + . ID=gene-C9F09_30670;Name=C9F09_30670;end_range=2559,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30670;partial=true PYKB01001749.1 Protein Homology CDS 2096 2559 . + 0 ID=cds-TGC70521.1;Parent=gene-C9F09_30670;Dbxref=NCBI_GP:TGC70521.1;Name=TGC70521.1;Note=catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate%3B also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity;end_range=2559,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454964.1;locus_tag=C9F09_30670;partial=true;product=2-methylcitrate synthase;protein_id=TGC70521.1;transl_table=11 ##sequence-region PYKB01001238.1 1 2552 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001238.1 Genbank region 1 2552 . + . ID=PYKB01001238.1:1..2552;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001238.1 Genbank gene 1 566 . + . ID=gene-C9F09_21055;Name=C9F09_21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21055;partial=true;start_range=.,1 PYKB01001238.1 Protein Homology CDS 1 566 . + 2 ID=cds-TGC82725.1;Parent=gene-C9F09_21055;Dbxref=NCBI_GP:TGC82725.1;Name=TGC82725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=C9F09_21055;partial=true;product=ABC transporter permease;protein_id=TGC82725.1;start_range=.,1;transl_table=11 PYKB01001238.1 Genbank gene 753 1886 . + . ID=gene-C9F09_21060;Name=C9F09_21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21060 PYKB01001238.1 Protein Homology CDS 753 1886 . + 0 ID=cds-TGC82726.1;Parent=gene-C9F09_21060;Dbxref=NCBI_GP:TGC82726.1;Name=TGC82726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=C9F09_21060;product=porin;protein_id=TGC82726.1;transl_table=11 PYKB01001238.1 Genbank gene 2143 2552 . + . ID=gene-C9F09_21065;Name=C9F09_21065;end_range=2552,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21065;partial=true PYKB01001238.1 Protein Homology CDS 2143 2552 . + 0 ID=cds-TGC82727.1;Parent=gene-C9F09_21065;Dbxref=NCBI_GP:TGC82727.1;Name=TGC82727.1;end_range=2552,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455105.1;locus_tag=C9F09_21065;partial=true;product=metal ABC transporter substrate-binding protein;protein_id=TGC82727.1;transl_table=11 ##sequence-region PYKB01001723.1 1 2542 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001723.1 Genbank region 1 2542 . + . ID=PYKB01001723.1:1..2542;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001723.1 Genbank pseudogene 1 168 . + . ID=gene-C9F09_30195;Name=C9F09_30195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_30195;pseudo=true PYKB01001723.1 Protein Homology CDS 1 168 . + 0 ID=cds-C9F09_30195;Parent=gene-C9F09_30195;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458987.1;locus_tag=C9F09_30195;product=DNA repair protein RadA;pseudo=true;transl_table=11 PYKB01001723.1 Genbank gene 319 1551 . + . ID=gene-C9F09_30200;Name=C9F09_30200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30200 PYKB01001723.1 Protein Homology CDS 319 1551 . + 0 ID=cds-TGC71368.1;Parent=gene-C9F09_30200;Dbxref=NCBI_GP:TGC71368.1;Name=TGC71368.1;Note=catalyzes the formation of NAD(+) from nicotinamide ribonucleotide%3B catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside%3B also has a regulatory function;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=C9F09_30200;product=trifunctional NAD biosynthesis/regulator protein NadR;protein_id=TGC71368.1;transl_table=11 PYKB01001723.1 Genbank gene 1669 2542 . - . ID=gene-C9F09_30205;Name=C9F09_30205;end_range=2542,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30205;partial=true PYKB01001723.1 Protein Homology CDS 1669 2542 . - 1 ID=cds-TGC71367.1;Parent=gene-C9F09_30205;Dbxref=NCBI_GP:TGC71367.1;Name=TGC71367.1;end_range=2542,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=C9F09_30205;partial=true;product=hypothetical protein;protein_id=TGC71367.1;transl_table=11 ##sequence-region PYKB01000810.1 1 2536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000810.1 Genbank region 1 2536 . + . ID=PYKB01000810.1:1..2536;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000810.1 Genbank pseudogene 1 1196 . + . ID=gene-C9F09_12605;Name=astD;gbkey=Gene;gene=astD;gene_biotype=pseudogene;locus_tag=C9F09_12605;pseudo=true PYKB01000810.1 Protein Homology CDS 1 1196 . + 2 ID=cds-C9F09_12605;Parent=gene-C9F09_12605;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=astD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=C9F09_12605;product=succinylglutamate-semialdehyde dehydrogenase;pseudo=true;transl_table=11 PYKB01000810.1 Genbank gene 1193 2536 . + . ID=gene-C9F09_12610;Name=astB;end_range=2536,.;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=C9F09_12610;partial=true PYKB01000810.1 Protein Homology CDS 1193 2536 . + 0 ID=cds-TGC92019.1;Parent=gene-C9F09_12610;Dbxref=NCBI_GP:TGC92019.1;Name=TGC92019.1;end_range=2536,.;gbkey=CDS;gene=astB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=C9F09_12610;partial=true;product=N-succinylarginine dihydrolase;protein_id=TGC92019.1;transl_table=11 ##sequence-region PYKB01000520.1 1 2535 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000520.1 Genbank region 1 2535 . + . ID=PYKB01000520.1:1..2535;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000520.1 Genbank gene 1 229 . - . ID=gene-C9F09_06960;Name=C9F09_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06960;partial=true;start_range=.,1 PYKB01000520.1 Protein Homology CDS 1 229 . - 0 ID=cds-TGC97142.1;Parent=gene-C9F09_06960;Dbxref=NCBI_GP:TGC97142.1;Name=TGC97142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457142.1;locus_tag=C9F09_06960;partial=true;product=GGDEF domain-containing protein;protein_id=TGC97142.1;start_range=.,1;transl_table=11 PYKB01000520.1 Genbank gene 222 740 . - . ID=gene-C9F09_06965;Name=C9F09_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06965 PYKB01000520.1 Protein Homology CDS 222 740 . - 0 ID=cds-TGC97143.1;Parent=gene-C9F09_06965;Dbxref=NCBI_GP:TGC97143.1;Name=TGC97143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=C9F09_06965;product=DUF4154 domain-containing protein;protein_id=TGC97143.1;transl_table=11 PYKB01000520.1 Genbank gene 1180 2250 . + . ID=gene-C9F09_06970;Name=C9F09_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06970 PYKB01000520.1 Protein Homology CDS 1180 2250 . + 0 ID=cds-TGC97144.1;Parent=gene-C9F09_06970;Dbxref=NCBI_GP:TGC97144.1;Name=TGC97144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457140.1;locus_tag=C9F09_06970;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=TGC97144.1;transl_table=11 PYKB01000520.1 Genbank gene 2260 2535 . + . ID=gene-C9F09_06975;Name=tyrA;end_range=2535,.;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=C9F09_06975;partial=true PYKB01000520.1 Protein Homology CDS 2260 2535 . + 0 ID=cds-TGC97145.1;Parent=gene-C9F09_06975;Dbxref=NCBI_GP:TGC97145.1;Name=TGC97145.1;end_range=2535,.;gbkey=CDS;gene=tyrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000225180.1;locus_tag=C9F09_06975;partial=true;product=chorismate mutase;protein_id=TGC97145.1;transl_table=11 ##sequence-region PYKB01000414.1 1 2533 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000414.1 Genbank region 1 2533 . + . ID=PYKB01000414.1:1..2533;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000414.1 Genbank pseudogene 1 1454 . - . ID=gene-C9F09_04740;Name=C9F09_04740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04740;pseudo=true PYKB01000414.1 Protein Homology CDS 1 1454 . - 0 ID=cds-C9F09_04740;Parent=gene-C9F09_04740;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457565.1;locus_tag=C9F09_04740;product=cell division protein FtsP;pseudo=true;transl_table=11 PYKB01000414.1 Genbank gene 1528 2265 . - . ID=gene-C9F09_04745;Name=C9F09_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04745 PYKB01000414.1 Protein Homology CDS 1528 2265 . - 0 ID=cds-TGC99364.1;Parent=gene-C9F09_04745;Dbxref=NCBI_GP:TGC99364.1;Name=TGC99364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457566.1;locus_tag=C9F09_04745;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=TGC99364.1;transl_table=11 ##sequence-region PYKB01001641.1 1 2531 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001641.1 Genbank region 1 2531 . + . ID=PYKB01001641.1:1..2531;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001641.1 Genbank gene 1 308 . - . ID=gene-C9F09_28690;Name=C9F09_28690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28690;partial=true;start_range=.,1 PYKB01001641.1 Protein Homology CDS 1 308 . - 0 ID=cds-TGC73801.1;Parent=gene-C9F09_28690;Dbxref=NCBI_GP:TGC73801.1;Name=TGC73801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=C9F09_28690;partial=true;product=hypothetical protein;protein_id=TGC73801.1;start_range=.,1;transl_table=11 PYKB01001641.1 Genbank gene 605 1450 . + . ID=gene-C9F09_28695;Name=C9F09_28695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28695 PYKB01001641.1 Protein Homology CDS 605 1450 . + 0 ID=cds-TGC73799.1;Parent=gene-C9F09_28695;Dbxref=NCBI_GP:TGC73799.1;Name=TGC73799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=C9F09_28695;product=hypothetical protein;protein_id=TGC73799.1;transl_table=11 PYKB01001641.1 Genbank gene 1525 2531 . + . ID=gene-C9F09_28700;Name=C9F09_28700;end_range=2531,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28700;partial=true PYKB01001641.1 Protein Homology CDS 1525 2531 . + 0 ID=cds-TGC73800.1;Parent=gene-C9F09_28700;Dbxref=NCBI_GP:TGC73800.1;Name=TGC73800.1;end_range=2531,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=C9F09_28700;partial=true;product=invasin;protein_id=TGC73800.1;transl_table=11 ##sequence-region PYKB01001384.1 1 2529 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001384.1 Genbank region 1 2529 . + . ID=PYKB01001384.1:1..2529;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001384.1 Genbank pseudogene 372 512 . + . ID=gene-C9F09_23870;Name=C9F09_23870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23870;pseudo=true PYKB01001384.1 Protein Homology CDS 372 512 . + 0 ID=cds-C9F09_23870;Parent=gene-C9F09_23870;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004901451.1;locus_tag=C9F09_23870;product=transposase;pseudo=true;transl_table=11 PYKB01001384.1 Genbank gene 763 2145 . + . ID=gene-C9F09_23875;Name=C9F09_23875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23875 PYKB01001384.1 Protein Homology CDS 763 2145 . + 0 ID=cds-TGC79783.1;Parent=gene-C9F09_23875;Dbxref=NCBI_GP:TGC79783.1;Name=TGC79783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458178.1;locus_tag=C9F09_23875;product=glycoside-pentoside-hexuronide family transporter;protein_id=TGC79783.1;transl_table=11 PYKB01001384.1 Genbank gene 2157 2529 . + . ID=gene-C9F09_23880;Name=C9F09_23880;end_range=2529,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23880;partial=true PYKB01001384.1 Protein Homology CDS 2157 2529 . + 0 ID=cds-TGC79784.1;Parent=gene-C9F09_23880;Dbxref=NCBI_GP:TGC79784.1;Name=TGC79784.1;Note=catalyzes the transfer of alpha-xylosyl residue;end_range=2529,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458179.1;locus_tag=C9F09_23880;partial=true;product=alpha-xylosidase;protein_id=TGC79784.1;transl_table=11 ##sequence-region PYKB01001634.1 1 2528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001634.1 Genbank region 1 2528 . + . ID=PYKB01001634.1:1..2528;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001634.1 Genbank gene 1 267 . + . ID=gene-C9F09_28555;Name=C9F09_28555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28555;partial=true;start_range=.,1 PYKB01001634.1 Protein Homology CDS 1 267 . + 0 ID=cds-TGC73991.1;Parent=gene-C9F09_28555;Dbxref=NCBI_GP:TGC73991.1;Name=TGC73991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=C9F09_28555;partial=true;product=DMSO reductase;protein_id=TGC73991.1;start_range=.,1;transl_table=11 PYKB01001634.1 Genbank gene 264 821 . + . ID=gene-C9F09_28560;Name=C9F09_28560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28560 PYKB01001634.1 Protein Homology CDS 264 821 . + 0 ID=cds-TGC73992.1;Parent=gene-C9F09_28560;Dbxref=NCBI_GP:TGC73992.1;Name=TGC73992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=C9F09_28560;product=4Fe-4S dicluster domain-containing protein;protein_id=TGC73992.1;transl_table=11 PYKB01001634.1 Genbank gene 821 1588 . + . ID=gene-C9F09_28565;Name=C9F09_28565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28565 PYKB01001634.1 Protein Homology CDS 821 1588 . + 0 ID=cds-TGC73993.1;Parent=gene-C9F09_28565;Dbxref=NCBI_GP:TGC73993.1;Name=TGC73993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=C9F09_28565;product=hydrogenase;protein_id=TGC73993.1;transl_table=11 PYKB01001634.1 Genbank gene 1656 2084 . - . ID=gene-C9F09_28570;Name=C9F09_28570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28570 PYKB01001634.1 Protein Homology CDS 1656 2084 . - 0 ID=cds-TGC73994.1;Parent=gene-C9F09_28570;Dbxref=NCBI_GP:TGC73994.1;Name=TGC73994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455191.1;locus_tag=C9F09_28570;product=universal stress protein UspG;protein_id=TGC73994.1;transl_table=11 PYKB01001634.1 Genbank gene 2307 2528 . + . ID=gene-C9F09_28575;Name=C9F09_28575;end_range=2528,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28575;partial=true PYKB01001634.1 Protein Homology CDS 2307 2528 . + 0 ID=cds-TGC73995.1;Parent=gene-C9F09_28575;Dbxref=NCBI_GP:TGC73995.1;Name=TGC73995.1;end_range=2528,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455192.1;locus_tag=C9F09_28575;partial=true;product=glutathione-dependent formaldehyde dehydrogenase;protein_id=TGC73995.1;transl_table=11 ##sequence-region PYKB01000760.1 1 9220 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000760.1 Genbank region 1 9220 . + . ID=PYKB01000760.1:1..9220;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000760.1 Genbank gene 9 398 . - . ID=gene-C9F09_11730;Name=C9F09_11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11730 PYKB01000760.1 Protein Homology CDS 9 398 . - 0 ID=cds-TGC92734.1;Parent=gene-C9F09_11730;Dbxref=NCBI_GP:TGC92734.1;Name=TGC92734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460509.1;locus_tag=C9F09_11730;product=hypothetical protein;protein_id=TGC92734.1;transl_table=11 PYKB01000760.1 Genbank gene 569 853 . - . ID=gene-C9F09_11735;Name=C9F09_11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11735 PYKB01000760.1 Protein Homology CDS 569 853 . - 0 ID=cds-TGC92724.1;Parent=gene-C9F09_11735;Dbxref=NCBI_GP:TGC92724.1;Name=TGC92724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=C9F09_11735;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=TGC92724.1;transl_table=11 PYKB01000760.1 Genbank gene 843 1091 . - . ID=gene-C9F09_11740;Name=C9F09_11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11740 PYKB01000760.1 Protein Homology CDS 843 1091 . - 0 ID=cds-TGC92725.1;Parent=gene-C9F09_11740;Dbxref=NCBI_GP:TGC92725.1;Name=TGC92725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460511.1;locus_tag=C9F09_11740;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=TGC92725.1;transl_table=11 PYKB01000760.1 Genbank gene 1708 2187 . + . ID=gene-C9F09_11745;Name=C9F09_11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11745 PYKB01000760.1 Protein Homology CDS 1708 2187 . + 0 ID=cds-TGC92726.1;Parent=gene-C9F09_11745;Dbxref=NCBI_GP:TGC92726.1;Name=TGC92726.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00359.20;locus_tag=C9F09_11745;product=hypothetical protein;protein_id=TGC92726.1;transl_table=11 PYKB01000760.1 Genbank gene 2247 2528 . + . ID=gene-C9F09_11750;Name=C9F09_11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11750 PYKB01000760.1 Protein Homology CDS 2247 2528 . + 0 ID=cds-TGC92727.1;Parent=gene-C9F09_11750;Dbxref=NCBI_GP:TGC92727.1;Name=TGC92727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312378.1;locus_tag=C9F09_11750;product=PTS sugar transporter subunit IIB;protein_id=TGC92727.1;transl_table=11 PYKB01000760.1 Genbank gene 2537 3931 . + . ID=gene-C9F09_11755;Name=C9F09_11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11755 PYKB01000760.1 Protein Homology CDS 2537 3931 . + 0 ID=cds-TGC92728.1;Parent=gene-C9F09_11755;Dbxref=NCBI_GP:TGC92728.1;Name=TGC92728.1;Note=with GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol%3B subunit IIC forms the translocation channel and contains the substrate binding site;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016181922.1;locus_tag=C9F09_11755;product=PTS galactitol transporter subunit IIC;protein_id=TGC92728.1;transl_table=11 PYKB01000760.1 Genbank gene 4009 5520 . + . ID=gene-C9F09_11760;Name=C9F09_11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11760 PYKB01000760.1 Protein Homology CDS 4009 5520 . + 0 ID=cds-TGC92729.1;Parent=gene-C9F09_11760;Dbxref=NCBI_GP:TGC92729.1;Name=TGC92729.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00370.19;locus_tag=C9F09_11760;product=hypothetical protein;protein_id=TGC92729.1;transl_table=11 PYKB01000760.1 Genbank gene 5520 6554 . + . ID=gene-C9F09_11765;Name=C9F09_11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11765 PYKB01000760.1 Protein Homology CDS 5520 6554 . + 0 ID=cds-TGC92730.1;Parent=gene-C9F09_11765;Dbxref=NCBI_GP:TGC92730.1;Name=TGC92730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012862578.1;locus_tag=C9F09_11765;product=Zn-dependent alcohol dehydrogenase;protein_id=TGC92730.1;transl_table=11 PYKB01000760.1 Genbank gene 6741 7484 . + . ID=gene-C9F09_11770;Name=C9F09_11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11770 PYKB01000760.1 Protein Homology CDS 6741 7484 . + 0 ID=cds-TGC92731.1;Parent=gene-C9F09_11770;Dbxref=NCBI_GP:TGC92731.1;Name=TGC92731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312376.2;locus_tag=C9F09_11770;product=hypothetical protein;protein_id=TGC92731.1;transl_table=11 PYKB01000760.1 Genbank gene 7490 8329 . + . ID=gene-C9F09_11775;Name=C9F09_11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11775 PYKB01000760.1 Protein Homology CDS 7490 8329 . + 0 ID=cds-TGC92732.1;Parent=gene-C9F09_11775;Dbxref=NCBI_GP:TGC92732.1;Name=TGC92732.1;Note=class II aldolase%3B catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle%2C glycolysis and gluconeogenesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=C9F09_11775;product=fructose-1%2C6-bisphosphate aldolase;protein_id=TGC92732.1;transl_table=11 PYKB01000760.1 Genbank gene 8371 8643 . + . ID=gene-C9F09_11780;Name=C9F09_11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11780 PYKB01000760.1 Protein Homology CDS 8371 8643 . + 0 ID=cds-TGC92735.1;Parent=gene-C9F09_11780;Dbxref=NCBI_GP:TGC92735.1;Name=TGC92735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017801587.1;locus_tag=C9F09_11780;product=HPr family phosphocarrier protein;protein_id=TGC92735.1;transl_table=11 PYKB01000760.1 Genbank gene 8713 9210 . + . ID=gene-C9F09_11785;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=C9F09_11785 PYKB01000760.1 Protein Homology CDS 8713 9210 . + 0 ID=cds-TGC92733.1;Parent=gene-C9F09_11785;Dbxref=NCBI_GP:TGC92733.1;Name=TGC92733.1;gbkey=CDS;gene=surE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004886531.1;locus_tag=C9F09_11785;product=5'/3'-nucleotidase SurE;protein_id=TGC92733.1;transl_table=11 ##sequence-region PYKB01001245.1 1 2524 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001245.1 Genbank region 1 2524 . + . ID=PYKB01001245.1:1..2524;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001245.1 Genbank gene 1 538 . + . ID=gene-C9F09_21230;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=C9F09_21230;partial=true;start_range=.,1 PYKB01001245.1 Protein Homology CDS 1 538 . + 1 ID=cds-TGC82528.1;Parent=gene-C9F09_21230;Dbxref=NCBI_GP:TGC82528.1;Name=TGC82528.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=C9F09_21230;partial=true;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=TGC82528.1;start_range=.,1;transl_table=11 PYKB01001245.1 Genbank gene 548 1402 . + . ID=gene-C9F09_21235;Name=C9F09_21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21235 PYKB01001245.1 Protein Homology CDS 548 1402 . + 0 ID=cds-TGC82529.1;Parent=gene-C9F09_21235;Dbxref=NCBI_GP:TGC82529.1;Name=TGC82529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=C9F09_21235;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=TGC82529.1;transl_table=11 PYKB01001245.1 Genbank gene 1402 2088 . + . ID=gene-C9F09_21240;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=C9F09_21240 PYKB01001245.1 Protein Homology CDS 1402 2088 . + 0 ID=cds-TGC82530.1;Parent=gene-C9F09_21240;Dbxref=NCBI_GP:TGC82530.1;Name=TGC82530.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=C9F09_21240;product=L-ribulose-5-phosphate 4-epimerase UlaF;protein_id=TGC82530.1;transl_table=11 PYKB01001245.1 Genbank gene 2176 2524 . + . ID=gene-C9F09_21245;Name=C9F09_21245;end_range=2524,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21245;partial=true PYKB01001245.1 Protein Homology CDS 2176 2524 . + 0 ID=cds-TGC82531.1;Parent=gene-C9F09_21245;Dbxref=NCBI_GP:TGC82531.1;Name=TGC82531.1;end_range=2524,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091040.1;locus_tag=C9F09_21245;partial=true;product=hypothetical protein;protein_id=TGC82531.1;transl_table=11 ##sequence-region PYKB01001303.1 1 2520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001303.1 Genbank region 1 2520 . + . ID=PYKB01001303.1:1..2520;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001303.1 Genbank gene 1 111 . + . ID=gene-C9F09_22300;Name=C9F09_22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22300;partial=true;start_range=.,1 PYKB01001303.1 Protein Homology CDS 1 111 . + 0 ID=cds-TGC81535.1;Parent=gene-C9F09_22300;Dbxref=NCBI_GP:TGC81535.1;Name=TGC81535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455404.1;locus_tag=C9F09_22300;partial=true;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=TGC81535.1;start_range=.,1;transl_table=11 PYKB01001303.1 Genbank gene 199 1332 . + . ID=gene-C9F09_22305;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=C9F09_22305 PYKB01001303.1 Protein Homology CDS 199 1332 . + 0 ID=cds-TGC81536.1;Parent=gene-C9F09_22305;Dbxref=NCBI_GP:TGC81536.1;Name=TGC81536.1;Note=part of the PotFGHI ATP-dependent putrescine transporter;gbkey=CDS;gene=potG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459855.1;locus_tag=C9F09_22305;product=polyamine ABC transporter ATP-binding protein;protein_id=TGC81536.1;transl_table=11 PYKB01001303.1 Genbank gene 1342 2295 . + . ID=gene-C9F09_22310;Name=C9F09_22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22310 PYKB01001303.1 Protein Homology CDS 1342 2295 . + 0 ID=cds-TGC81537.1;Parent=gene-C9F09_22310;Dbxref=NCBI_GP:TGC81537.1;Name=TGC81537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=C9F09_22310;product=putrescine ABC transporter permease PotH;protein_id=TGC81537.1;transl_table=11 PYKB01001303.1 Genbank pseudogene 2292 2444 . + . ID=gene-C9F09_22315;Name=C9F09_22315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22315;pseudo=true PYKB01001303.1 Protein Homology CDS 2292 2444 . + 0 ID=cds-C9F09_22315;Parent=gene-C9F09_22315;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455407.1;locus_tag=C9F09_22315;product=polyamine ABC transporter permease;pseudo=true;transl_table=11 ##sequence-region PYKB01001378.1 1 2518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001378.1 Genbank region 1 2518 . + . ID=PYKB01001378.1:1..2518;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001378.1 Genbank pseudogene 51 821 . + . ID=gene-C9F09_23740;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=pseudogene;locus_tag=C9F09_23740;pseudo=true PYKB01001378.1 Protein Homology CDS 51 821 . + 0 ID=cds-C9F09_23740;Parent=gene-C9F09_23740;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458311.1;locus_tag=C9F09_23740;product=inner membrane protein YhjD;pseudo=true;transl_table=11 PYKB01001378.1 Genbank gene 1172 2494 . + . ID=gene-C9F09_23745;Name=C9F09_23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23745 PYKB01001378.1 Protein Homology CDS 1172 2494 . + 0 ID=cds-TGC79926.1;Parent=gene-C9F09_23745;Dbxref=NCBI_GP:TGC79926.1;Name=TGC79926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=C9F09_23745;product=MFS transporter;protein_id=TGC79926.1;transl_table=11 ##sequence-region PYKB01000702.1 1 2518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000702.1 Genbank region 1 2518 . + . ID=PYKB01000702.1:1..2518;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000702.1 Genbank gene 1 806 . - . ID=gene-C9F09_10680;Name=C9F09_10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10680;partial=true;start_range=.,1 PYKB01000702.1 Protein Homology CDS 1 806 . - 0 ID=cds-TGC93669.1;Parent=gene-C9F09_10680;Dbxref=NCBI_GP:TGC93669.1;Name=TGC93669.1;Note=aldehyde reductase%3B catalyzes the conversion of acetaldehyde to ethanol;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456996.1;locus_tag=C9F09_10680;partial=true;product=ethanolamine utilization protein EutG;protein_id=TGC93669.1;start_range=.,1;transl_table=11 PYKB01000702.1 Genbank gene 796 1635 . - . ID=gene-C9F09_10685;Name=C9F09_10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10685 PYKB01000702.1 Protein Homology CDS 796 1635 . - 0 ID=cds-TGC93670.1;Parent=gene-C9F09_10685;Dbxref=NCBI_GP:TGC93670.1;Name=TGC93670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456997.1;locus_tag=C9F09_10685;product=ethanolamine utilization protein EutJ;protein_id=TGC93670.1;transl_table=11 PYKB01000702.1 Genbank gene 1646 2518 . - . ID=gene-C9F09_10690;Name=C9F09_10690;end_range=2518,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10690;partial=true PYKB01000702.1 Protein Homology CDS 1646 2518 . - 0 ID=cds-TGC93671.1;Parent=gene-C9F09_10690;Dbxref=NCBI_GP:TGC93671.1;Name=TGC93671.1;Note=ethanolamine utilization protein%3B catalyzes the formation of acetyl-CoA from acetaldehyde;end_range=2518,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=C9F09_10690;partial=true;product=aldehyde dehydrogenase EutE;protein_id=TGC93671.1;transl_table=11 ##sequence-region PYKB01001205.1 1 2515 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001205.1 Genbank region 1 2515 . + . ID=PYKB01001205.1:1..2515;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001205.1 Genbank gene 1 264 . - . ID=gene-C9F09_20510;Name=C9F09_20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20510;partial=true;start_range=.,1 PYKB01001205.1 Protein Homology CDS 1 264 . - 0 ID=cds-TGC83458.1;Parent=gene-C9F09_20510;Dbxref=NCBI_GP:TGC83458.1;Name=TGC83458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=C9F09_20510;partial=true;product=MFS transporter;protein_id=TGC83458.1;start_range=.,1;transl_table=11 PYKB01001205.1 Genbank gene 511 897 . + . ID=gene-C9F09_20515;Name=C9F09_20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20515 PYKB01001205.1 Protein Homology CDS 511 897 . + 0 ID=cds-TGC83459.1;Parent=gene-C9F09_20515;Dbxref=NCBI_GP:TGC83459.1;Name=TGC83459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454819.1;locus_tag=C9F09_20515;product=hypothetical protein;protein_id=TGC83459.1;transl_table=11 PYKB01001205.1 Genbank gene 986 2143 . - . ID=gene-C9F09_20520;Name=C9F09_20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20520 PYKB01001205.1 Protein Homology CDS 986 2143 . - 0 ID=cds-TGC83460.1;Parent=gene-C9F09_20520;Dbxref=NCBI_GP:TGC83460.1;Name=TGC83460.1;Note=regulates the expression of the operons for the enzymes involved in galactarate%2C glucarate and glycerate utilization;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=C9F09_20520;product=carbohydrate diacid regulon transcriptional regulator CdaR;protein_id=TGC83460.1;transl_table=11 PYKB01001205.1 Genbank gene 2296 2515 . - . ID=gene-C9F09_20525;Name=C9F09_20525;end_range=2515,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20525;partial=true PYKB01001205.1 Protein Homology CDS 2296 2515 . - 1 ID=cds-TGC83461.1;Parent=gene-C9F09_20525;Dbxref=NCBI_GP:TGC83461.1;Name=TGC83461.1;Note=protease Do%3B required at high temperature%3B degrades damaged proteins;end_range=2515,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454817.1;locus_tag=C9F09_20525;partial=true;product=serine endoprotease;protein_id=TGC83461.1;transl_table=11 ##sequence-region PYKB01001575.1 1 2511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001575.1 Genbank region 1 2511 . + . ID=PYKB01001575.1:1..2511;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001575.1 Genbank gene 1 652 . + . ID=gene-C9F09_27500;Name=C9F09_27500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27500;partial=true;start_range=.,1 PYKB01001575.1 Protein Homology CDS 1 652 . + 1 ID=cds-TGC75432.1;Parent=gene-C9F09_27500;Dbxref=NCBI_GP:TGC75432.1;Name=TGC75432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455602.1;locus_tag=C9F09_27500;partial=true;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=TGC75432.1;start_range=.,1;transl_table=11 PYKB01001575.1 Genbank gene 724 2100 . + . ID=gene-C9F09_27505;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=C9F09_27505 PYKB01001575.1 Protein Homology CDS 724 2100 . + 0 ID=cds-TGC75433.1;Parent=gene-C9F09_27505;Dbxref=NCBI_GP:TGC75433.1;Name=TGC75433.1;gbkey=CDS;gene=hpaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=C9F09_27505;product=4-hydroxyphenylacetate permease;protein_id=TGC75433.1;transl_table=11 PYKB01001575.1 Genbank gene 2110 2511 . + . ID=gene-C9F09_27510;Name=C9F09_27510;end_range=2511,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27510;partial=true PYKB01001575.1 Protein Homology CDS 2110 2511 . + 0 ID=cds-TGC75434.1;Parent=gene-C9F09_27510;Dbxref=NCBI_GP:TGC75434.1;Name=TGC75434.1;end_range=2511,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=C9F09_27510;partial=true;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=TGC75434.1;transl_table=11 ##sequence-region PYKB01001489.1 1 2500 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001489.1 Genbank region 1 2500 . + . ID=PYKB01001489.1:1..2500;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001489.1 Genbank gene 1 1152 . + . ID=gene-C9F09_25875;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=C9F09_25875;partial=true;start_range=.,1 PYKB01001489.1 Protein Homology CDS 1 1152 . + 0 ID=cds-TGC77522.1;Parent=gene-C9F09_25875;Dbxref=NCBI_GP:TGC77522.1;Name=TGC77522.1;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455918.1;locus_tag=C9F09_25875;partial=true;product=nitrate reductase subunit beta;protein_id=TGC77522.1;start_range=.,1;transl_table=11 PYKB01001489.1 Genbank gene 1152 1847 . + . ID=gene-C9F09_25880;Name=C9F09_25880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25880 PYKB01001489.1 Protein Homology CDS 1152 1847 . + 0 ID=cds-TGC77523.1;Parent=gene-C9F09_25880;Dbxref=NCBI_GP:TGC77523.1;Name=TGC77523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455917.1;locus_tag=C9F09_25880;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=TGC77523.1;transl_table=11 PYKB01001489.1 Genbank gene 1844 2500 . + . ID=gene-C9F09_25885;Name=narI;end_range=2500,.;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=C9F09_25885;partial=true PYKB01001489.1 Protein Homology CDS 1844 2500 . + 0 ID=cds-TGC77524.1;Parent=gene-C9F09_25885;Dbxref=NCBI_GP:TGC77524.1;Name=TGC77524.1;end_range=2500,.;gbkey=CDS;gene=narI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=C9F09_25885;partial=true;product=respiratory nitrate reductase subunit gamma;protein_id=TGC77524.1;transl_table=11 ##sequence-region PYKB01000537.1 1 2496 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000537.1 Genbank region 1 2496 . + . ID=PYKB01000537.1:1..2496;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000537.1 Genbank pseudogene 54 296 . + . ID=gene-C9F09_07305;Name=C9F09_07305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07305;pseudo=true PYKB01000537.1 Protein Homology CDS 54 296 . + 0 ID=cds-C9F09_07305;Parent=gene-C9F09_07305;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=C9F09_07305;product=DJ-1 family protein;pseudo=true;transl_table=11 PYKB01000537.1 Genbank pseudogene 408 588 . + . ID=gene-C9F09_07310;Name=C9F09_07310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07310;pseudo=true PYKB01000537.1 Protein Homology CDS 408 588 . + 0 ID=cds-C9F09_07310;Parent=gene-C9F09_07310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675566.1;locus_tag=C9F09_07310;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000537.1 Genbank gene 811 1614 . + . ID=gene-C9F09_07315;Name=C9F09_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07315 PYKB01000537.1 Protein Homology CDS 811 1614 . + 0 ID=cds-TGC96793.1;Parent=gene-C9F09_07315;Dbxref=NCBI_GP:TGC96793.1;Name=TGC96793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=C9F09_07315;product=trehalose-phosphatase;protein_id=TGC96793.1;transl_table=11 PYKB01000537.1 Genbank gene 1589 2496 . + . ID=gene-C9F09_07320;Name=C9F09_07320;end_range=2496,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07320;partial=true PYKB01000537.1 Protein Homology CDS 1589 2496 . + 0 ID=cds-TGC96794.1;Parent=gene-C9F09_07320;Dbxref=NCBI_GP:TGC96794.1;Name=TGC96794.1;end_range=2496,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456494.1;locus_tag=C9F09_07320;partial=true;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=TGC96794.1;transl_table=11 ##sequence-region PYKB01000663.1 1 2488 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000663.1 Genbank region 1 2488 . + . ID=PYKB01000663.1:1..2488;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000663.1 Genbank pseudogene 151 315 . + . ID=gene-C9F09_09955;Name=C9F09_09955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_09955;pseudo=true PYKB01000663.1 Protein Homology CDS 151 315 . + 0 ID=cds-C9F09_09955;Parent=gene-C9F09_09955;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015848379.1;locus_tag=C9F09_09955;product=IS5 family transposase;pseudo=true;transl_table=11 PYKB01000663.1 Genbank gene 904 2133 . - . ID=gene-C9F09_09960;Name=C9F09_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09960 PYKB01000663.1 Protein Homology CDS 904 2133 . - 0 ID=cds-TGC94148.1;Parent=gene-C9F09_09960;Dbxref=NCBI_GP:TGC94148.1;Name=TGC94148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006892393.1;locus_tag=C9F09_09960;product=fimbrial protein;protein_id=TGC94148.1;transl_table=11 PYKB01000663.1 Genbank gene 2157 2488 . - . ID=gene-C9F09_09965;Name=C9F09_09965;end_range=2488,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09965;partial=true PYKB01000663.1 Protein Homology CDS 2157 2488 . - 2 ID=cds-TGC94149.1;Parent=gene-C9F09_09965;Dbxref=NCBI_GP:TGC94149.1;Name=TGC94149.1;end_range=2488,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957977.1;locus_tag=C9F09_09965;partial=true;product=fimbrial protein;protein_id=TGC94149.1;transl_table=11 ##sequence-region PYKB01001312.1 1 2485 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001312.1 Genbank region 1 2485 . + . ID=PYKB01001312.1:1..2485;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001312.1 Genbank gene 1 1193 . + . ID=gene-C9F09_22555;Name=C9F09_22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22555;partial=true;start_range=.,1 PYKB01001312.1 Protein Homology CDS 1 1193 . + 2 ID=cds-TGC81323.1;Parent=gene-C9F09_22555;Dbxref=NCBI_GP:TGC81323.1;Name=TGC81323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=C9F09_22555;partial=true;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=TGC81323.1;start_range=.,1;transl_table=11 PYKB01001312.1 Genbank pseudogene 1517 2422 . + . ID=gene-C9F09_22560;Name=C9F09_22560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22560;pseudo=true PYKB01001312.1 Protein Homology CDS 1517 2422 . + 0 ID=cds-C9F09_22560;Parent=gene-C9F09_22560;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457785.1;locus_tag=C9F09_22560;product=anaerobic sulfatase maturase;pseudo=true;transl_table=11 ##sequence-region PYKB01000423.1 1 9167 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000423.1 Genbank region 1 9167 . + . ID=PYKB01000423.1:1..9167;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000423.1 Genbank gene 1 821 . - . ID=gene-C9F09_04880;Name=C9F09_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04880;partial=true;start_range=.,1 PYKB01000423.1 Protein Homology CDS 1 821 . - 0 ID=cds-TGC99192.1;Parent=gene-C9F09_04880;Dbxref=NCBI_GP:TGC99192.1;Name=TGC99192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459565.1;locus_tag=C9F09_04880;partial=true;product=SIS domain-containing protein;protein_id=TGC99192.1;start_range=.,1;transl_table=11 PYKB01000423.1 Genbank gene 854 1708 . - . ID=gene-C9F09_04885;Name=C9F09_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04885 PYKB01000423.1 Protein Homology CDS 854 1708 . - 0 ID=cds-TGC99181.1;Parent=gene-C9F09_04885;Dbxref=NCBI_GP:TGC99181.1;Name=TGC99181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459566.1;locus_tag=C9F09_04885;product=PTS mannose transporter subunit IID;protein_id=TGC99181.1;transl_table=11 PYKB01000423.1 Genbank gene 1711 2454 . - . ID=gene-C9F09_04890;Name=C9F09_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04890 PYKB01000423.1 Protein Homology CDS 1711 2454 . - 0 ID=cds-TGC99182.1;Parent=gene-C9F09_04890;Dbxref=NCBI_GP:TGC99182.1;Name=TGC99182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459567.1;locus_tag=C9F09_04890;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=TGC99182.1;transl_table=11 PYKB01000423.1 Genbank gene 2469 2939 . - . ID=gene-C9F09_04895;Name=C9F09_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04895 PYKB01000423.1 Protein Homology CDS 2469 2939 . - 0 ID=cds-TGC99183.1;Parent=gene-C9F09_04895;Dbxref=NCBI_GP:TGC99183.1;Name=TGC99183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459568.1;locus_tag=C9F09_04895;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=TGC99183.1;transl_table=11 PYKB01000423.1 Genbank gene 2917 3366 . - . ID=gene-C9F09_04900;Name=C9F09_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04900 PYKB01000423.1 Protein Homology CDS 2917 3366 . - 0 ID=cds-TGC99184.1;Parent=gene-C9F09_04900;Dbxref=NCBI_GP:TGC99184.1;Name=TGC99184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459569.1;locus_tag=C9F09_04900;product=PTS mannose transporter subunit IIAB;protein_id=TGC99184.1;transl_table=11 PYKB01000423.1 Genbank gene 3566 4219 . - . ID=gene-C9F09_04905;Name=C9F09_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04905 PYKB01000423.1 Protein Homology CDS 3566 4219 . - 0 ID=cds-TGC99185.1;Parent=gene-C9F09_04905;Dbxref=NCBI_GP:TGC99185.1;Name=TGC99185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=C9F09_04905;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=TGC99185.1;transl_table=11 PYKB01000423.1 Genbank gene 4316 4684 . - . ID=gene-C9F09_04910;Name=C9F09_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04910 PYKB01000423.1 Protein Homology CDS 4316 4684 . - 0 ID=cds-TGC99186.1;Parent=gene-C9F09_04910;Dbxref=NCBI_GP:TGC99186.1;Name=TGC99186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=C9F09_04910;product=MmcQ/YjbR family DNA-binding protein;protein_id=TGC99186.1;transl_table=11 PYKB01000423.1 Genbank gene 4684 5265 . - . ID=gene-C9F09_04915;Name=C9F09_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04915 PYKB01000423.1 Protein Homology CDS 4684 5265 . - 0 ID=cds-TGC99187.1;Parent=gene-C9F09_04915;Dbxref=NCBI_GP:TGC99187.1;Name=TGC99187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=C9F09_04915;product=TetR/AcrR family transcriptional regulator;protein_id=TGC99187.1;transl_table=11 PYKB01000423.1 Genbank gene 5554 5895 . + . ID=gene-C9F09_04920;Name=ramA;gbkey=Gene;gene=ramA;gene_biotype=protein_coding;locus_tag=C9F09_04920 PYKB01000423.1 Protein Homology CDS 5554 5895 . + 0 ID=cds-TGC99188.1;Parent=gene-C9F09_04920;Dbxref=NCBI_GP:TGC99188.1;Name=TGC99188.1;gbkey=CDS;gene=ramA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455158.1;locus_tag=C9F09_04920;product=RamA family antibiotic efflux transcriptional regulator;protein_id=TGC99188.1;transl_table=11 PYKB01000423.1 Genbank gene 5901 6149 . - . ID=gene-C9F09_04925;Name=C9F09_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04925 PYKB01000423.1 Protein Homology CDS 5901 6149 . - 0 ID=cds-TGC99189.1;Parent=gene-C9F09_04925;Dbxref=NCBI_GP:TGC99189.1;Name=TGC99189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=C9F09_04925;product=DUF1158 domain-containing protein;protein_id=TGC99189.1;transl_table=11 PYKB01000423.1 Genbank gene 6216 7334 . - . ID=gene-C9F09_04930;Name=C9F09_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04930 PYKB01000423.1 Protein Homology CDS 6216 7334 . - 0 ID=cds-TGC99190.1;Parent=gene-C9F09_04930;Dbxref=NCBI_GP:TGC99190.1;Name=TGC99190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=C9F09_04930;product=glutamate--cysteine ligase;protein_id=TGC99190.1;transl_table=11 PYKB01000423.1 Genbank gene 7346 8050 . - . ID=gene-C9F09_04935;Name=C9F09_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04935 PYKB01000423.1 Protein Homology CDS 7346 8050 . - 0 ID=cds-TGC99191.1;Parent=gene-C9F09_04935;Dbxref=NCBI_GP:TGC99191.1;Name=TGC99191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455161.1;locus_tag=C9F09_04935;product=enterobactin synthase subunit EntD;protein_id=TGC99191.1;transl_table=11 PYKB01000423.1 Genbank gene 8097 9167 . - . ID=gene-C9F09_04940;Name=C9F09_04940;end_range=9167,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04940;partial=true PYKB01000423.1 Protein Homology CDS 8097 9167 . - 0 ID=cds-TGC99193.1;Parent=gene-C9F09_04940;Dbxref=NCBI_GP:TGC99193.1;Name=TGC99193.1;end_range=9167,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=C9F09_04940;partial=true;product=TonB-dependent siderophore receptor;protein_id=TGC99193.1;transl_table=11 ##sequence-region PYKB01000272.1 1 2480 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000272.1 Genbank region 1 2480 . + . ID=PYKB01000272.1:1..2480;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000272.1 Genbank gene 1 105 . + . ID=gene-C9F09_03070;Name=C9F09_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03070;partial=true;start_range=.,1 PYKB01000272.1 Protein Homology CDS 1 105 . + 0 ID=cds-TGD01964.1;Parent=gene-C9F09_03070;Dbxref=NCBI_GP:TGD01964.1;Name=TGD01964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=C9F09_03070;partial=true;product=hydrolase;protein_id=TGD01964.1;start_range=.,1;transl_table=11 PYKB01000272.1 Genbank gene 160 1983 . - . ID=gene-C9F09_03075;Name=C9F09_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03075 PYKB01000272.1 Protein Homology CDS 160 1983 . - 0 ID=cds-TGD01965.1;Parent=gene-C9F09_03075;Dbxref=NCBI_GP:TGD01965.1;Name=TGD01965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458041.1;locus_tag=C9F09_03075;product=translational GTPase TypA;protein_id=TGD01965.1;transl_table=11 PYKB01000272.1 Genbank gene 1952 2380 . + . ID=gene-C9F09_03080;Name=C9F09_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03080 PYKB01000272.1 Protein Homology CDS 1952 2380 . + 0 ID=cds-TGD01966.1;Parent=gene-C9F09_03080;Dbxref=NCBI_GP:TGD01966.1;Name=TGD01966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453298.1;locus_tag=C9F09_03080;product=hypothetical protein;protein_id=TGD01966.1;transl_table=11 PYKB01000272.1 Genbank gene 2359 2480 . + . ID=gene-C9F09_03085;Name=C9F09_03085;end_range=2480,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03085;partial=true PYKB01000272.1 Protein Homology CDS 2359 2480 . + 0 ID=cds-TGD01967.1;Parent=gene-C9F09_03085;Dbxref=NCBI_GP:TGD01967.1;Name=TGD01967.1;end_range=2480,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=C9F09_03085;partial=true;product=glutamine synthetase;protein_id=TGD01967.1;transl_table=11 ##sequence-region PYKB01000380.1 1 2468 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000380.1 Genbank region 1 2468 . + . ID=PYKB01000380.1:1..2468;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000380.1 Genbank gene 1 664 . + . ID=gene-C9F09_04310;Name=C9F09_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04310;partial=true;start_range=.,1 PYKB01000380.1 Protein Homology CDS 1 664 . + 1 ID=cds-TGC99973.1;Parent=gene-C9F09_04310;Dbxref=NCBI_GP:TGC99973.1;Name=TGC99973.1;Note=catalyzes the acetylation of lysine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=C9F09_04310;partial=true;product=protein acetyltransferase;protein_id=TGC99973.1;start_range=.,1;transl_table=11 PYKB01000380.1 Genbank gene 779 2134 . + . ID=gene-C9F09_04315;Name=C9F09_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04315 PYKB01000380.1 Protein Homology CDS 779 2134 . + 0 ID=cds-TGC99974.1;Parent=gene-C9F09_04315;Dbxref=NCBI_GP:TGC99974.1;Name=TGC99974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=C9F09_04315;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=TGC99974.1;transl_table=11 PYKB01000380.1 Genbank gene 2177 2468 . + . ID=gene-C9F09_04320;Name=C9F09_04320;end_range=2468,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04320;partial=true PYKB01000380.1 Protein Homology CDS 2177 2468 . + 0 ID=cds-TGC99975.1;Parent=gene-C9F09_04320;Dbxref=NCBI_GP:TGC99975.1;Name=TGC99975.1;end_range=2468,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457128.1;locus_tag=C9F09_04320;partial=true;product=hypothetical protein;protein_id=TGC99975.1;transl_table=11 ##sequence-region PYKB01001098.1 1 2464 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001098.1 Genbank region 1 2464 . + . ID=PYKB01001098.1:1..2464;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001098.1 Genbank gene 1 674 . + . ID=gene-C9F09_18395;Name=C9F09_18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18395;partial=true;start_range=.,1 PYKB01001098.1 Protein Homology CDS 1 674 . + 2 ID=cds-TGC86131.1;Parent=gene-C9F09_18395;Dbxref=NCBI_GP:TGC86131.1;Name=TGC86131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458248.1;locus_tag=C9F09_18395;partial=true;product=AraC family transcriptional regulator;protein_id=TGC86131.1;start_range=.,1;transl_table=11 PYKB01001098.1 Genbank gene 835 1530 . - . ID=gene-C9F09_18400;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=C9F09_18400 PYKB01001098.1 Protein Homology CDS 835 1530 . - 0 ID=cds-TGC86132.1;Parent=gene-C9F09_18400;Dbxref=NCBI_GP:TGC86132.1;Name=TGC86132.1;gbkey=CDS;gene=araD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458249.1;locus_tag=C9F09_18400;product=L-ribulose-5-phosphate 4-epimerase;protein_id=TGC86132.1;transl_table=11 PYKB01001098.1 Genbank gene 1524 2384 . - . ID=gene-C9F09_18405;Name=C9F09_18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18405 PYKB01001098.1 Protein Homology CDS 1524 2384 . - 0 ID=cds-TGC86133.1;Parent=gene-C9F09_18405;Dbxref=NCBI_GP:TGC86133.1;Name=TGC86133.1;Note=L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=C9F09_18405;product=L-ribulose-5-phosphate 3-epimerase;protein_id=TGC86133.1;transl_table=11 PYKB01001098.1 Genbank gene 2377 2464 . - . ID=gene-C9F09_18410;Name=sgbH;end_range=2464,.;gbkey=Gene;gene=sgbH;gene_biotype=protein_coding;locus_tag=C9F09_18410;partial=true PYKB01001098.1 Protein Homology CDS 2377 2464 . - 1 ID=cds-TGC86134.1;Parent=gene-C9F09_18410;Dbxref=NCBI_GP:TGC86134.1;Name=TGC86134.1;Note=catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate;end_range=2464,.;gbkey=CDS;gene=sgbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458251.1;locus_tag=C9F09_18410;partial=true;product=3-keto-L-gulonate-6-phosphate decarboxylase;protein_id=TGC86134.1;transl_table=11 ##sequence-region PYKB01001467.1 1 2461 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001467.1 Genbank region 1 2461 . + . ID=PYKB01001467.1:1..2461;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001467.1 Genbank gene 1 1509 . + . ID=gene-C9F09_25570;Name=C9F09_25570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25570;partial=true;start_range=.,1 PYKB01001467.1 Protein Homology CDS 1 1509 . + 0 ID=cds-TGC77860.1;Parent=gene-C9F09_25570;Dbxref=NCBI_GP:TGC77860.1;Name=TGC77860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=C9F09_25570;partial=true;product=molecular chaperone HscC;protein_id=TGC77860.1;start_range=.,1;transl_table=11 PYKB01001467.1 Genbank gene 1531 2461 . - . ID=gene-C9F09_25575;Name=C9F09_25575;end_range=2461,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25575;partial=true PYKB01001467.1 Protein Homology CDS 1531 2461 . - 1 ID=cds-TGC77859.1;Parent=gene-C9F09_25575;Dbxref=NCBI_GP:TGC77859.1;Name=TGC77859.1;end_range=2461,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=C9F09_25575;partial=true;product=J domain-containing protein;protein_id=TGC77859.1;transl_table=11 ##sequence-region PYKB01000773.1 1 2461 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000773.1 Genbank region 1 2461 . + . ID=PYKB01000773.1:1..2461;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000773.1 Genbank gene 1 1127 . + . ID=gene-C9F09_11980;Name=C9F09_11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11980;partial=true;start_range=.,1 PYKB01000773.1 Protein Homology CDS 1 1127 . + 2 ID=cds-TGC92557.1;Parent=gene-C9F09_11980;Dbxref=NCBI_GP:TGC92557.1;Name=TGC92557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456758.1;locus_tag=C9F09_11980;partial=true;product=lysine transporter;protein_id=TGC92557.1;start_range=.,1;transl_table=11 PYKB01000773.1 Genbank pseudogene 1265 1571 . - . ID=gene-C9F09_11985;Name=C9F09_11985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11985;pseudo=true PYKB01000773.1 Protein Homology CDS 1265 1571 . - 0 ID=cds-C9F09_11985;Parent=gene-C9F09_11985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344107.1;locus_tag=C9F09_11985;product=colicin I receptor;pseudo=true;transl_table=11 PYKB01000773.1 Genbank gene 1474 2461 . + . ID=gene-C9F09_11990;Name=C9F09_11990;end_range=2461,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11990;partial=true PYKB01000773.1 Protein Homology CDS 1474 2461 . + 0 ID=cds-TGC92558.1;Parent=gene-C9F09_11990;Dbxref=NCBI_GP:TGC92558.1;Name=TGC92558.1;Note=Cir%3B FeuA%3B CirA%3B receptor protein for siderophores (colicin IA%2C IB and V) and microcins (E492%2C H47%2C and M)%3B TonB-dependent%3B able to transport monomers%2C dimer%2C and linear trimers of 2%2C3-dihydorxybenzoylserine%3B outer membrane protein;end_range=2461,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456757.1;locus_tag=C9F09_11990;partial=true;product=catecholate siderophore receptor CirA;protein_id=TGC92558.1;transl_table=11 ##sequence-region PYKB01001237.1 1 2459 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001237.1 Genbank region 1 2459 . + . ID=PYKB01001237.1:1..2459;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001237.1 Genbank pseudogene 63 302 . - . ID=gene-C9F09_21040;Name=C9F09_21040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21040;pseudo=true PYKB01001237.1 Protein Homology CDS 63 302 . - 0 ID=cds-C9F09_21040;Parent=gene-C9F09_21040;Note=involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457817.1;locus_tag=C9F09_21040;product=amino acid permease;pseudo=true;transl_table=11 PYKB01001237.1 Genbank gene 509 1249 . - . ID=gene-C9F09_21045;Name=C9F09_21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21045 PYKB01001237.1 Protein Homology CDS 509 1249 . - 0 ID=cds-TGC82730.1;Parent=gene-C9F09_21045;Dbxref=NCBI_GP:TGC82730.1;Name=TGC82730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457818.1;locus_tag=C9F09_21045;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=TGC82730.1;transl_table=11 PYKB01001237.1 Genbank gene 1246 2459 . - . ID=gene-C9F09_21050;Name=C9F09_21050;end_range=2459,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21050;partial=true PYKB01001237.1 Protein Homology CDS 1246 2459 . - 2 ID=cds-TGC82731.1;Parent=gene-C9F09_21050;Dbxref=NCBI_GP:TGC82731.1;Name=TGC82731.1;Note=enterobacterial common antigen polymerase;end_range=2459,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=C9F09_21050;partial=true;product=O-antigen assembly polymerase;protein_id=TGC82731.1;transl_table=11 ##sequence-region PYKB01000908.1 1 2458 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000908.1 Genbank region 1 2458 . + . ID=PYKB01000908.1:1..2458;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000908.1 Genbank gene 1 239 . + . ID=gene-C9F09_14925;Name=C9F09_14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14925;partial=true;start_range=.,1 PYKB01000908.1 Protein Homology CDS 1 239 . + 2 ID=cds-TGC90023.1;Parent=gene-C9F09_14925;Dbxref=NCBI_GP:TGC90023.1;Name=TGC90023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456600.1;locus_tag=C9F09_14925;partial=true;product=aldehyde dehydrogenase EutE;protein_id=TGC90023.1;start_range=.,1;transl_table=11 PYKB01000908.1 Genbank gene 251 1363 . + . ID=gene-C9F09_14930;Name=C9F09_14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14930 PYKB01000908.1 Protein Homology CDS 251 1363 . + 0 ID=cds-TGC90024.1;Parent=gene-C9F09_14930;Dbxref=NCBI_GP:TGC90024.1;Name=TGC90024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456601.1;locus_tag=C9F09_14930;product=propanediol utilization protein;protein_id=TGC90024.1;transl_table=11 PYKB01000908.1 Genbank gene 1360 2458 . + . ID=gene-C9F09_14935;Name=C9F09_14935;end_range=2458,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14935;partial=true PYKB01000908.1 Protein Homology CDS 1360 2458 . + 0 ID=cds-TGC90025.1;Parent=gene-C9F09_14935;Dbxref=NCBI_GP:TGC90025.1;Name=TGC90025.1;end_range=2458,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=C9F09_14935;partial=true;product=electron transport complex protein RnfC;protein_id=TGC90025.1;transl_table=11 ##sequence-region PYKB01001115.1 1 2454 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001115.1 Genbank region 1 2454 . + . ID=PYKB01001115.1:1..2454;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001115.1 Genbank pseudogene 34 939 . + . ID=gene-C9F09_18750;Name=C9F09_18750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18750;pseudo=true PYKB01001115.1 Protein Homology CDS 34 939 . + 0 ID=cds-C9F09_18750;Parent=gene-C9F09_18750;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456784.1;locus_tag=C9F09_18750;product=nucleoid-associated protein YejK;pseudo=true;transl_table=11 PYKB01001115.1 Genbank gene 967 1587 . + . ID=gene-C9F09_18755;Name=C9F09_18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18755 PYKB01001115.1 Protein Homology CDS 967 1587 . + 0 ID=cds-TGC85611.1;Parent=gene-C9F09_18755;Dbxref=NCBI_GP:TGC85611.1;Name=TGC85611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=C9F09_18755;product=hypothetical protein;protein_id=TGC85611.1;transl_table=11 PYKB01001115.1 Genbank gene 1696 1980 . - . ID=gene-C9F09_18760;Name=C9F09_18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18760 PYKB01001115.1 Protein Homology CDS 1696 1980 . - 0 ID=cds-TGC85612.1;Parent=gene-C9F09_18760;Dbxref=NCBI_GP:TGC85612.1;Name=TGC85612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=C9F09_18760;product=50S ribosomal protein L25;protein_id=TGC85612.1;transl_table=11 PYKB01001115.1 Genbank gene 2105 2454 . - . ID=gene-C9F09_18765;Name=C9F09_18765;end_range=2454,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18765;partial=true PYKB01001115.1 Protein Homology CDS 2105 2454 . - 2 ID=cds-TGC85613.1;Parent=gene-C9F09_18765;Dbxref=NCBI_GP:TGC85613.1;Name=TGC85613.1;end_range=2454,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456781.1;locus_tag=C9F09_18765;partial=true;product=hypothetical protein;protein_id=TGC85613.1;transl_table=11 ##sequence-region PYKB01000132.1 1 2453 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000132.1 Genbank region 1 2453 . + . ID=PYKB01000132.1:1..2453;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000132.1 Genbank gene 1 438 . + . ID=gene-C9F09_01515;Name=C9F09_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01515;partial=true;start_range=.,1 PYKB01000132.1 Protein Homology CDS 1 438 . + 0 ID=cds-TGD04831.1;Parent=gene-C9F09_01515;Dbxref=NCBI_GP:TGD04831.1;Name=TGD04831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455355.1;locus_tag=C9F09_01515;partial=true;product=multidrug ABC transporter ATP-binding protein;protein_id=TGD04831.1;start_range=.,1;transl_table=11 PYKB01000132.1 Genbank gene 431 1561 . + . ID=gene-C9F09_01520;Name=C9F09_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01520 PYKB01000132.1 Protein Homology CDS 431 1561 . + 0 ID=cds-TGD04832.1;Parent=gene-C9F09_01520;Dbxref=NCBI_GP:TGD04832.1;Name=TGD04832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455354.1;locus_tag=C9F09_01520;product=hypothetical protein;protein_id=TGD04832.1;transl_table=11 PYKB01000132.1 Genbank gene 1661 2453 . + . ID=gene-C9F09_01525;Name=C9F09_01525;end_range=2453,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01525;partial=true PYKB01000132.1 Protein Homology CDS 1661 2453 . + 0 ID=cds-TGD04833.1;Parent=gene-C9F09_01525;Dbxref=NCBI_GP:TGD04833.1;Name=TGD04833.1;end_range=2453,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455353.1;locus_tag=C9F09_01525;partial=true;product=hypothetical protein;protein_id=TGD04833.1;transl_table=11 ##sequence-region PYKB01001350.1 1 2433 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001350.1 Genbank region 1 2433 . + . ID=PYKB01001350.1:1..2433;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001350.1 Genbank gene 1 338 . - . ID=gene-C9F09_23215;Name=C9F09_23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23215;partial=true;start_range=.,1 PYKB01001350.1 Protein Homology CDS 1 338 . - 0 ID=cds-TGC80512.1;Parent=gene-C9F09_23215;Dbxref=NCBI_GP:TGC80512.1;Name=TGC80512.1;Note=with HisPMQ is involved in the transport of histidine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=C9F09_23215;partial=true;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=TGC80512.1;start_range=.,1;transl_table=11 PYKB01001350.1 Genbank gene 576 1358 . - . ID=gene-C9F09_23220;Name=C9F09_23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23220 PYKB01001350.1 Protein Homology CDS 576 1358 . - 0 ID=cds-TGC80510.1;Parent=gene-C9F09_23220;Dbxref=NCBI_GP:TGC80510.1;Name=TGC80510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=C9F09_23220;product=lysine/arginine/ornithine-binding periplasmic protein;protein_id=TGC80510.1;transl_table=11 PYKB01001350.1 Genbank gene 1648 2217 . - . ID=gene-C9F09_23225;Name=C9F09_23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23225 PYKB01001350.1 Protein Homology CDS 1648 2217 . - 0 ID=cds-TGC80511.1;Parent=gene-C9F09_23225;Dbxref=NCBI_GP:TGC80511.1;Name=TGC80511.1;Note=catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456898.1;locus_tag=C9F09_23225;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=TGC80511.1;transl_table=11 PYKB01001350.1 Genbank gene 2244 2433 . - . ID=gene-C9F09_23230;Name=C9F09_23230;end_range=2433,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23230;partial=true PYKB01001350.1 Protein Homology CDS 2244 2433 . - 1 ID=cds-TGC80513.1;Parent=gene-C9F09_23230;Dbxref=NCBI_GP:TGC80513.1;Name=TGC80513.1;end_range=2433,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=C9F09_23230;partial=true;product=amino acid permease;protein_id=TGC80513.1;transl_table=11 ##sequence-region PYKB01001180.1 1 9160 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001180.1 Genbank region 1 9160 . + . ID=PYKB01001180.1:1..9160;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001180.1 Genbank gene 1 143 . - . ID=gene-C9F09_20000;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=C9F09_20000;partial=true;start_range=.,1 PYKB01001180.1 Protein Homology CDS 1 143 . - 0 ID=cds-TGC84053.1;Parent=gene-C9F09_20000;Dbxref=NCBI_GP:TGC84053.1;Name=TGC84053.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458489.1;locus_tag=C9F09_20000;partial=true;product=large conductance mechanosensitive channel protein MscL;protein_id=TGC84053.1;start_range=.,1;transl_table=11 PYKB01001180.1 Genbank gene 285 1661 . - . ID=gene-C9F09_20005;Name=C9F09_20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20005 PYKB01001180.1 Protein Homology CDS 285 1661 . - 0 ID=cds-TGC84054.1;Parent=gene-C9F09_20005;Dbxref=NCBI_GP:TGC84054.1;Name=TGC84054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=C9F09_20005;product=Trk system potassium transporter TrkA;protein_id=TGC84054.1;transl_table=11 PYKB01001180.1 Genbank gene 1683 2972 . - . ID=gene-C9F09_20010;Name=C9F09_20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20010 PYKB01001180.1 Protein Homology CDS 1683 2972 . - 0 ID=cds-TGC84055.1;Parent=gene-C9F09_20010;Dbxref=NCBI_GP:TGC84055.1;Name=TGC84055.1;Note=catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=C9F09_20010;product=16S rRNA (cytosine(967)-C(5))-methyltransferase;protein_id=TGC84055.1;transl_table=11 PYKB01001180.1 Genbank gene 3024 3971 . - . ID=gene-C9F09_20015;Name=C9F09_20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20015 PYKB01001180.1 Protein Homology CDS 3024 3971 . - 0 ID=cds-TGC84056.1;Parent=gene-C9F09_20015;Dbxref=NCBI_GP:TGC84056.1;Name=TGC84056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=C9F09_20015;product=methionyl-tRNA formyltransferase;protein_id=TGC84056.1;transl_table=11 PYKB01001180.1 Genbank gene 3987 4496 . - . ID=gene-C9F09_20020;Name=C9F09_20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20020 PYKB01001180.1 Protein Homology CDS 3987 4496 . - 0 ID=cds-TGC84057.1;Parent=gene-C9F09_20020;Dbxref=NCBI_GP:TGC84057.1;Name=TGC84057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=C9F09_20020;product=peptide deformylase;protein_id=TGC84057.1;transl_table=11 PYKB01001180.1 Genbank gene 4628 5752 . + . ID=gene-C9F09_20025;Name=C9F09_20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20025 PYKB01001180.1 Protein Homology CDS 4628 5752 . + 0 ID=cds-TGC84058.1;Parent=gene-C9F09_20025;Dbxref=NCBI_GP:TGC84058.1;Name=TGC84058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=C9F09_20025;product=DNA-protecting protein DprA;protein_id=TGC84058.1;transl_table=11 PYKB01001180.1 Genbank gene 5724 6197 . + . ID=gene-C9F09_20030;Name=C9F09_20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20030 PYKB01001180.1 Protein Homology CDS 5724 6197 . + 0 ID=cds-TGC84059.1;Parent=gene-C9F09_20030;Dbxref=NCBI_GP:TGC84059.1;Name=TGC84059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=C9F09_20030;product=hypothetical protein;protein_id=TGC84059.1;transl_table=11 PYKB01001180.1 Genbank gene 6224 6766 . + . ID=gene-C9F09_20035;Name=C9F09_20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20035 PYKB01001180.1 Protein Homology CDS 6224 6766 . + 0 ID=cds-TGC84060.1;Parent=gene-C9F09_20035;Dbxref=NCBI_GP:TGC84060.1;Name=TGC84060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=C9F09_20035;product=hypothetical protein;protein_id=TGC84060.1;transl_table=11 PYKB01001180.1 Genbank gene 6771 7343 . + . ID=gene-C9F09_20040;Name=C9F09_20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20040 PYKB01001180.1 Protein Homology CDS 6771 7343 . + 0 ID=cds-TGC84061.1;Parent=gene-C9F09_20040;Dbxref=NCBI_GP:TGC84061.1;Name=TGC84061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=C9F09_20040;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=TGC84061.1;transl_table=11 PYKB01001180.1 Genbank gene 7348 8166 . + . ID=gene-C9F09_20045;Name=C9F09_20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20045 PYKB01001180.1 Protein Homology CDS 7348 8166 . + 0 ID=cds-TGC84064.1;Parent=gene-C9F09_20045;Dbxref=NCBI_GP:TGC84064.1;Name=TGC84064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=C9F09_20045;product=shikimate dehydrogenase;protein_id=TGC84064.1;transl_table=11 PYKB01001180.1 Genbank gene 8163 8420 . + . ID=gene-C9F09_20050;Name=C9F09_20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20050 PYKB01001180.1 Protein Homology CDS 8163 8420 . + 0 ID=cds-TGC84062.1;Parent=gene-C9F09_20050;Dbxref=NCBI_GP:TGC84062.1;Name=TGC84062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=C9F09_20050;product=DUF1488 domain-containing protein;protein_id=TGC84062.1;transl_table=11 PYKB01001180.1 Genbank gene 8396 8950 . - . ID=gene-C9F09_20055;Name=C9F09_20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20055 PYKB01001180.1 Protein Homology CDS 8396 8950 . - 0 ID=cds-TGC84063.1;Parent=gene-C9F09_20055;Dbxref=NCBI_GP:TGC84063.1;Name=TGC84063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458500.1;locus_tag=C9F09_20055;product=gamma carbonic anhydrase family protein;protein_id=TGC84063.1;transl_table=11 ##sequence-region PYKB01000850.1 1 2431 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000850.1 Genbank region 1 2431 . + . ID=PYKB01000850.1:1..2431;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000850.1 Genbank gene 1 368 . - . ID=gene-C9F09_13545;Name=C9F09_13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13545;partial=true;start_range=.,1 PYKB01000850.1 Protein Homology CDS 1 368 . - 0 ID=cds-TGC91256.1;Parent=gene-C9F09_13545;Dbxref=NCBI_GP:TGC91256.1;Name=TGC91256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461434.3;locus_tag=C9F09_13545;partial=true;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=TGC91256.1;start_range=.,1;transl_table=11 PYKB01000850.1 Genbank gene 403 582 . - . ID=gene-C9F09_13550;Name=C9F09_13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13550 PYKB01000850.1 Protein Homology CDS 403 582 . - 0 ID=cds-TGC91257.1;Parent=gene-C9F09_13550;Dbxref=NCBI_GP:TGC91257.1;Name=TGC91257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012512847.1;locus_tag=C9F09_13550;product=hypothetical protein;protein_id=TGC91257.1;transl_table=11 PYKB01000850.1 Genbank gene 781 1407 . + . ID=gene-C9F09_13555;Name=C9F09_13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13555 PYKB01000850.1 Protein Homology CDS 781 1407 . + 0 ID=cds-TGC91258.1;Parent=gene-C9F09_13555;Dbxref=NCBI_GP:TGC91258.1;Name=TGC91258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=C9F09_13555;product=uracil phosphoribosyltransferase;protein_id=TGC91258.1;transl_table=11 PYKB01000850.1 Genbank gene 1495 2431 . + . ID=gene-C9F09_13560;Name=C9F09_13560;end_range=2431,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13560;partial=true PYKB01000850.1 Protein Homology CDS 1495 2431 . + 0 ID=cds-TGC91259.1;Parent=gene-C9F09_13560;Dbxref=NCBI_GP:TGC91259.1;Name=TGC91259.1;end_range=2431,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457032.1;locus_tag=C9F09_13560;partial=true;product=uracil permease;protein_id=TGC91259.1;transl_table=11 ##sequence-region PYKB01001551.1 1 2424 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001551.1 Genbank region 1 2424 . + . ID=PYKB01001551.1:1..2424;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001551.1 Genbank gene 1 315 . - . ID=gene-C9F09_27090;Name=C9F09_27090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27090;partial=true;start_range=.,1 PYKB01001551.1 Protein Homology CDS 1 315 . - 0 ID=cds-TGC75994.1;Parent=gene-C9F09_27090;Dbxref=NCBI_GP:TGC75994.1;Name=TGC75994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=C9F09_27090;partial=true;product=hypothetical protein;protein_id=TGC75994.1;start_range=.,1;transl_table=11 PYKB01001551.1 Genbank gene 686 1993 . + . ID=gene-C9F09_27095;Name=C9F09_27095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27095 PYKB01001551.1 Protein Homology CDS 686 1993 . + 0 ID=cds-TGC75995.1;Parent=gene-C9F09_27095;Dbxref=NCBI_GP:TGC75995.1;Name=TGC75995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=C9F09_27095;product=long-chain fatty acid transporter;protein_id=TGC75995.1;transl_table=11 PYKB01001551.1 Genbank gene 2054 2424 . - . ID=gene-C9F09_27100;Name=C9F09_27100;end_range=2424,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27100;partial=true PYKB01001551.1 Protein Homology CDS 2054 2424 . - 2 ID=cds-TGC75996.1;Parent=gene-C9F09_27100;Dbxref=NCBI_GP:TGC75996.1;Name=TGC75996.1;Note=involved in maintaining OM lipid asymmetry;end_range=2424,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456933.1;locus_tag=C9F09_27100;partial=true;product=phospholipid-binding lipoprotein MlaA;protein_id=TGC75996.1;transl_table=11 ##sequence-region PYKB01000491.1 1 2423 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000491.1 Genbank region 1 2423 . + . ID=PYKB01000491.1:1..2423;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000491.1 Genbank gene 1 591 . - . ID=gene-C9F09_06210;Name=C9F09_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06210;partial=true;start_range=.,1 PYKB01000491.1 Protein Homology CDS 1 591 . - 0 ID=cds-TGC97844.1;Parent=gene-C9F09_06210;Dbxref=NCBI_GP:TGC97844.1;Name=TGC97844.1;Note=may play a role in electron transport between the anaerobic fatty acid oxidation pathway and the respiratory chain;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=C9F09_06210;partial=true;product=acyl-CoA dehydrogenase;protein_id=TGC97844.1;start_range=.,1;transl_table=11 PYKB01000491.1 Genbank gene 605 2200 . - . ID=gene-C9F09_06215;Name=C9F09_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06215 PYKB01000491.1 Protein Homology CDS 605 2200 . - 0 ID=cds-TGC97845.1;Parent=gene-C9F09_06215;Dbxref=NCBI_GP:TGC97845.1;Name=TGC97845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=C9F09_06215;product=acetate CoA-transferase YdiF;protein_id=TGC97845.1;transl_table=11 ##sequence-region PYKB01001474.1 1 2423 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001474.1 Genbank region 1 2423 . + . ID=PYKB01001474.1:1..2423;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001474.1 Genbank gene 61 201 . + . ID=gene-C9F09_25655;Name=C9F09_25655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25655 PYKB01001474.1 Protein Homology CDS 61 201 . + 0 ID=cds-TGC77746.1;Parent=gene-C9F09_25655;Dbxref=NCBI_GP:TGC77746.1;Name=TGC77746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001762949.1;locus_tag=C9F09_25655;product=ethanolamine utilization protein EutN;protein_id=TGC77746.1;transl_table=11 PYKB01001474.1 Genbank gene 211 1221 . + . ID=gene-C9F09_25660;Name=C9F09_25660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25660 PYKB01001474.1 Protein Homology CDS 211 1221 . + 0 ID=cds-TGC77744.1;Parent=gene-C9F09_25660;Dbxref=NCBI_GP:TGC77744.1;Name=TGC77744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456599.1;locus_tag=C9F09_25660;product=ATP:cob(I)alamin adenosyltransferase;protein_id=TGC77744.1;transl_table=11 PYKB01001474.1 Genbank gene 1218 2423 . + . ID=gene-C9F09_25665;Name=C9F09_25665;end_range=2423,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25665;partial=true PYKB01001474.1 Protein Homology CDS 1218 2423 . + 0 ID=cds-TGC77745.1;Parent=gene-C9F09_25665;Dbxref=NCBI_GP:TGC77745.1;Name=TGC77745.1;end_range=2423,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456600.1;locus_tag=C9F09_25665;partial=true;product=aldehyde dehydrogenase EutE;protein_id=TGC77745.1;transl_table=11 ##sequence-region PYKB01000479.1 1 2423 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000479.1 Genbank region 1 2423 . + . ID=PYKB01000479.1:1..2423;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000479.1 Genbank pseudogene 1 1551 . - . ID=gene-C9F09_06005;Name=C9F09_06005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_06005;pseudo=true PYKB01000479.1 Protein Homology CDS 1 1551 . - 0 ID=cds-C9F09_06005;Parent=gene-C9F09_06005;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=C9F09_06005;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000479.1 Genbank pseudogene 1760 2356 . + . ID=gene-C9F09_06010;Name=C9F09_06010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_06010;pseudo=true PYKB01000479.1 Protein Homology CDS 1760 2356 . + 0 ID=cds-C9F09_06010;Parent=gene-C9F09_06010;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457064.1;locus_tag=C9F09_06010;product=3-mercaptopyruvate sulfurtransferase;pseudo=true;transl_table=11 ##sequence-region PYKB01001404.1 1 2421 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001404.1 Genbank region 1 2421 . + . ID=PYKB01001404.1:1..2421;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001404.1 Genbank gene 1 408 . + . ID=gene-C9F09_24115;Name=C9F09_24115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24115;partial=true;start_range=.,1 PYKB01001404.1 Protein Homology CDS 1 408 . + 0 ID=cds-TGC79396.1;Parent=gene-C9F09_24115;Dbxref=NCBI_GP:TGC79396.1;Name=TGC79396.1;Note=bifunctional anthranilate synthase II/anthranilate phosphoribosyltransferase%3B TrpD%3B forms a heterotetramer with Trp E and the complex catalyzes the formation of anthranilate from chorismate and glutamine%3B also catalyzes the formation of N-(5-phospho-D-ribosyl)-anthranilate from athranilate and 5-phospho-alpha-D-ribose 1-diphosphate%3B functions in tryptophan biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=C9F09_24115;partial=true;product=bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase;protein_id=TGC79396.1;start_range=.,1;transl_table=11 PYKB01001404.1 Genbank gene 412 1770 . + . ID=gene-C9F09_24120;Name=C9F09_24120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24120 PYKB01001404.1 Protein Homology CDS 412 1770 . + 0 ID=cds-TGC79397.1;Parent=gene-C9F09_24120;Dbxref=NCBI_GP:TGC79397.1;Name=TGC79397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=C9F09_24120;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=TGC79397.1;transl_table=11 PYKB01001404.1 Genbank gene 1780 2421 . + . ID=gene-C9F09_24125;Name=C9F09_24125;end_range=2421,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24125;partial=true PYKB01001404.1 Protein Homology CDS 1780 2421 . + 0 ID=cds-TGC79398.1;Parent=gene-C9F09_24125;Dbxref=NCBI_GP:TGC79398.1;Name=TGC79398.1;end_range=2421,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016158396.1;locus_tag=C9F09_24125;partial=true;product=tryptophan synthase subunit beta;protein_id=TGC79398.1;transl_table=11 ##sequence-region PYKB01000100.1 1 2421 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000100.1 Genbank region 1 2421 . + . ID=PYKB01000100.1:1..2421;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000100.1 Genbank gene 1 587 . - . ID=gene-C9F09_01150;Name=C9F09_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01150;partial=true;start_range=.,1 PYKB01000100.1 Protein Homology CDS 1 587 . - 0 ID=cds-TGD05452.1;Parent=gene-C9F09_01150;Dbxref=NCBI_GP:TGD05452.1;Name=TGD05452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=C9F09_01150;partial=true;product=two-component system response regulator KdpE;protein_id=TGD05452.1;start_range=.,1;transl_table=11 PYKB01000100.1 Genbank pseudogene 584 2421 . - . ID=gene-C9F09_01155;Name=C9F09_01155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01155;pseudo=true PYKB01000100.1 Protein Homology CDS 584 2421 . - 2 ID=cds-C9F09_01155;Parent=gene-C9F09_01155;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=C9F09_01155;product=two-component system sensor histidine kinase KdbD;pseudo=true;transl_table=11 ##sequence-region PYKB01001015.1 1 2419 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001015.1 Genbank region 1 2419 . + . ID=PYKB01001015.1:1..2419;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001015.1 Genbank gene 1 2419 . + . ID=gene-C9F09_16970;Name=C9F09_16970;end_range=2419,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16970;partial=true;start_range=.,1 PYKB01001015.1 Protein Homology CDS 1 2419 . + 2 ID=cds-TGC87893.1;Parent=gene-C9F09_16970;Dbxref=NCBI_GP:TGC87893.1;Name=TGC87893.1;end_range=2419,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=C9F09_16970;partial=true;product=autotransporter adhesin BigA;protein_id=TGC87893.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001364.1 1 2418 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001364.1 Genbank region 1 2418 . + . ID=PYKB01001364.1:1..2418;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001364.1 Genbank gene 1 598 . - . ID=gene-C9F09_23390;Name=C9F09_23390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23390;partial=true;start_range=.,1 PYKB01001364.1 Protein Homology CDS 1 598 . - 0 ID=cds-TGC80277.1;Parent=gene-C9F09_23390;Dbxref=NCBI_GP:TGC80277.1;Name=TGC80277.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02817.15;locus_tag=C9F09_23390;partial=true;product=hypothetical protein;protein_id=TGC80277.1;start_range=.,1;transl_table=11 PYKB01001364.1 Genbank gene 613 2418 . - . ID=gene-C9F09_23395;Name=aceE;end_range=2418,.;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=C9F09_23395;partial=true PYKB01001364.1 Protein Homology CDS 613 2418 . - 0 ID=cds-TGC80278.1;Parent=gene-C9F09_23395;Dbxref=NCBI_GP:TGC80278.1;Name=TGC80278.1;end_range=2418,.;gbkey=CDS;gene=aceE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459157.1;locus_tag=C9F09_23395;partial=true;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=TGC80278.1;transl_table=11 ##sequence-region PYKB01000542.1 1 2407 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000542.1 Genbank region 1 2407 . + . ID=PYKB01000542.1:1..2407;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000542.1 Genbank gene 1 1246 . + . ID=gene-C9F09_07385;Name=C9F09_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07385;partial=true;start_range=.,1 PYKB01000542.1 Protein Homology CDS 1 1246 . + 1 ID=cds-TGC96693.1;Parent=gene-C9F09_07385;Dbxref=NCBI_GP:TGC96693.1;Name=TGC96693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=C9F09_07385;partial=true;product=transcriptional regulator CadC;protein_id=TGC96693.1;start_range=.,1;transl_table=11 PYKB01000542.1 Genbank gene 1607 2407 . + . ID=gene-C9F09_07390;Name=C9F09_07390;end_range=2407,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07390;partial=true PYKB01000542.1 Protein Homology CDS 1607 2407 . + 0 ID=cds-TGC96694.1;Parent=gene-C9F09_07390;Dbxref=NCBI_GP:TGC96694.1;Name=TGC96694.1;end_range=2407,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=C9F09_07390;partial=true;product=hypothetical protein;protein_id=TGC96694.1;transl_table=11 ##sequence-region PYKB01001444.1 1 9110 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001444.1 Genbank region 1 9110 . + . ID=PYKB01001444.1:1..9110;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001444.1 Genbank gene 19 798 . + . ID=gene-C9F09_25035;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=C9F09_25035 PYKB01001444.1 Protein Homology CDS 19 798 . + 0 ID=cds-TGC78394.1;Parent=gene-C9F09_25035;Dbxref=NCBI_GP:TGC78394.1;Name=TGC78394.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457776.1;locus_tag=C9F09_25035;product=twin-arginine translocase subunit TatC;protein_id=TGC78394.1;transl_table=11 PYKB01001444.1 Genbank gene 840 1622 . + . ID=gene-C9F09_25040;Name=C9F09_25040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25040 PYKB01001444.1 Protein Homology CDS 840 1622 . + 0 ID=cds-TGC78395.1;Parent=gene-C9F09_25040;Dbxref=NCBI_GP:TGC78395.1;Name=TGC78395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457775.1;locus_tag=C9F09_25040;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=TGC78395.1;transl_table=11 PYKB01001444.1 Genbank gene 1630 2118 . - . ID=gene-C9F09_25045;Name=C9F09_25045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25045 PYKB01001444.1 Protein Homology CDS 1630 2118 . - 0 ID=cds-TGC78396.1;Parent=gene-C9F09_25045;Dbxref=NCBI_GP:TGC78396.1;Name=TGC78396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=C9F09_25045;product=transcription/translation regulatory transformer protein RfaH;protein_id=TGC78396.1;transl_table=11 PYKB01001444.1 Genbank gene 2304 3782 . + . ID=gene-C9F09_25050;Name=C9F09_25050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25050 PYKB01001444.1 Protein Homology CDS 2304 3782 . + 0 ID=cds-TGC78397.1;Parent=gene-C9F09_25050;Dbxref=NCBI_GP:TGC78397.1;Name=TGC78397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=C9F09_25050;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=TGC78397.1;transl_table=11 PYKB01001444.1 Genbank gene 3868 4569 . + . ID=gene-C9F09_25055;Name=C9F09_25055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25055 PYKB01001444.1 Protein Homology CDS 3868 4569 . + 0 ID=cds-TGC78398.1;Parent=gene-C9F09_25055;Dbxref=NCBI_GP:TGC78398.1;Name=TGC78398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=C9F09_25055;product=NAD(P)H-flavin reductase;protein_id=TGC78398.1;transl_table=11 PYKB01001444.1 Genbank gene 4823 6646 . + . ID=gene-C9F09_25060;Name=C9F09_25060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25060 PYKB01001444.1 Protein Homology CDS 4823 6646 . + 0 ID=cds-TGC78399.1;Parent=gene-C9F09_25060;Dbxref=NCBI_GP:TGC78399.1;Name=TGC78399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457771.1;locus_tag=C9F09_25060;product=arylsulfatase;protein_id=TGC78399.1;transl_table=11 PYKB01001444.1 Genbank gene 6843 8006 . - . ID=gene-C9F09_25065;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=C9F09_25065 PYKB01001444.1 Protein Homology CDS 6843 8006 . - 0 ID=cds-TGC78400.1;Parent=gene-C9F09_25065;Dbxref=NCBI_GP:TGC78400.1;Name=TGC78400.1;gbkey=CDS;gene=fadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457770.1;locus_tag=C9F09_25065;product=acetyl-CoA C-acyltransferase FadA;protein_id=TGC78400.1;transl_table=11 PYKB01001444.1 Genbank pseudogene 8016 9050 . - . ID=gene-C9F09_25070;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=pseudogene;locus_tag=C9F09_25070;pseudo=true PYKB01001444.1 Protein Homology CDS 8016 9050 . - 0 ID=cds-C9F09_25070;Parent=gene-C9F09_25070;Note=includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=fadB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001490315.1;locus_tag=C9F09_25070;product=fatty acid oxidation complex subunit alpha FadB;pseudo=true;transl_table=11 ##sequence-region PYKB01000754.1 1 2407 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000754.1 Genbank region 1 2407 . + . ID=PYKB01000754.1:1..2407;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000754.1 Genbank gene 1 359 . - . ID=gene-C9F09_11650;Name=C9F09_11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11650;partial=true;start_range=.,1 PYKB01000754.1 Protein Homology CDS 1 359 . - 0 ID=cds-TGC92885.1;Parent=gene-C9F09_11650;Dbxref=NCBI_GP:TGC92885.1;Name=TGC92885.1;Note=involved in maintaining OM lipid asymmetry;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456933.1;locus_tag=C9F09_11650;partial=true;product=phospholipid-binding lipoprotein MlaA;protein_id=TGC92885.1;start_range=.,1;transl_table=11 PYKB01000754.1 Genbank pseudogene 648 1589 . + . ID=gene-C9F09_11655;Name=C9F09_11655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11655;pseudo=true PYKB01000754.1 Protein Homology CDS 648 1589 . + 0 ID=cds-C9F09_11655;Parent=gene-C9F09_11655;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456934.1;locus_tag=C9F09_11655;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000754.1 Genbank gene 1665 1736 . + . ID=gene-C9F09_11660;Name=C9F09_11660;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_11660 PYKB01000754.1 tRNAscan-SE tRNA 1665 1736 . + . ID=rna-C9F09_11660;Parent=gene-C9F09_11660;anticodon=(pos:1698..1700);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_11660;product=tRNA-Arg PYKB01000754.1 tRNAscan-SE exon 1665 1736 . + . ID=exon-C9F09_11660-1;Parent=rna-C9F09_11660;anticodon=(pos:1698..1700);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_11660;product=tRNA-Arg PYKB01000754.1 Genbank gene 1911 2407 . + . ID=gene-C9F09_11665;Name=C9F09_11665;end_range=2407,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11665;partial=true PYKB01000754.1 Protein Homology CDS 1911 2407 . + 0 ID=cds-TGC92886.1;Parent=gene-C9F09_11665;Dbxref=NCBI_GP:TGC92886.1;Name=TGC92886.1;end_range=2407,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996992.1;locus_tag=C9F09_11665;partial=true;product=integrase;protein_id=TGC92886.1;transl_table=11 ##sequence-region PYKB01000914.1 1 2406 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000914.1 Genbank region 1 2406 . + . ID=PYKB01000914.1:1..2406;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000914.1 Genbank gene 332 949 . + . ID=gene-C9F09_15010;Name=C9F09_15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15010 PYKB01000914.1 Protein Homology CDS 332 949 . + 0 ID=cds-TGC89903.1;Parent=gene-C9F09_15010;Dbxref=NCBI_GP:TGC89903.1;Name=TGC89903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=C9F09_15010;product=trimeric intracellular cation channel family protein;protein_id=TGC89903.1;transl_table=11 PYKB01000914.1 Genbank gene 946 2406 . - . ID=gene-C9F09_15015;Name=C9F09_15015;end_range=2406,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15015;partial=true PYKB01000914.1 Protein Homology CDS 946 2406 . - 0 ID=cds-TGC89904.1;Parent=gene-C9F09_15015;Dbxref=NCBI_GP:TGC89904.1;Name=TGC89904.1;end_range=2406,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=C9F09_15015;partial=true;product=NAD-dependent DNA ligase LigB;protein_id=TGC89904.1;transl_table=11 ##sequence-region PYKB01001480.1 1 2398 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001480.1 Genbank region 1 2398 . + . ID=PYKB01001480.1:1..2398;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001480.1 Genbank gene 1 93 . - . ID=gene-C9F09_25710;Name=C9F09_25710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25710;partial=true;start_range=.,1 PYKB01001480.1 Protein Homology CDS 1 93 . - 0 ID=cds-TGC77638.1;Parent=gene-C9F09_25710;Dbxref=NCBI_GP:TGC77638.1;Name=TGC77638.1;Note=catalyzes the decarboxylation of oxaloacetate to form pyruvate and carbon dioxide;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462263.1;locus_tag=C9F09_25710;partial=true;product=oxaloacetate decarboxylase subunit gamma;protein_id=TGC77638.1;start_range=.,1;transl_table=11 PYKB01001480.1 Genbank gene 250 867 . - . ID=gene-C9F09_25715;Name=C9F09_25715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25715 PYKB01001480.1 Protein Homology CDS 250 867 . - 0 ID=cds-TGC77639.1;Parent=gene-C9F09_25715;Dbxref=NCBI_GP:TGC77639.1;Name=TGC77639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457730.1;locus_tag=C9F09_25715;product=L(+)-tartrate dehydratase subunit beta;protein_id=TGC77639.1;transl_table=11 PYKB01001480.1 Genbank gene 867 1766 . - . ID=gene-C9F09_25720;Name=C9F09_25720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25720 PYKB01001480.1 Protein Homology CDS 867 1766 . - 0 ID=cds-TGC77640.1;Parent=gene-C9F09_25720;Dbxref=NCBI_GP:TGC77640.1;Name=TGC77640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457731.1;locus_tag=C9F09_25720;product=L(+)-tartrate dehydratase subunit alpha;protein_id=TGC77640.1;transl_table=11 PYKB01001480.1 Genbank gene 1799 2398 . - . ID=gene-C9F09_25725;Name=C9F09_25725;end_range=2398,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25725;partial=true PYKB01001480.1 Protein Homology CDS 1799 2398 . - 0 ID=cds-TGC77641.1;Parent=gene-C9F09_25725;Dbxref=NCBI_GP:TGC77641.1;Name=TGC77641.1;end_range=2398,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457732.1;locus_tag=C9F09_25725;partial=true;product=cation transporter;protein_id=TGC77641.1;transl_table=11 ##sequence-region PYKB01001283.1 1 2385 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001283.1 Genbank region 1 2385 . + . ID=PYKB01001283.1:1..2385;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001283.1 Genbank pseudogene 97 210 . + . ID=gene-C9F09_21945;Name=C9F09_21945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21945;pseudo=true PYKB01001283.1 Protein Homology CDS 97 210 . + 0 ID=cds-C9F09_21945;Parent=gene-C9F09_21945;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456282.1;locus_tag=C9F09_21945;product=3-deoxy-8-phosphooctulonate synthase;pseudo=true;transl_table=11 PYKB01001283.1 Genbank gene 264 1364 . - . ID=gene-C9F09_21950;Name=C9F09_21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21950 PYKB01001283.1 Protein Homology CDS 264 1364 . - 0 ID=cds-TGC81942.1;Parent=gene-C9F09_21950;Dbxref=NCBI_GP:TGC81942.1;Name=TGC81942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=C9F09_21950;product=sodium-potassium/proton antiporter ChaA;protein_id=TGC81942.1;transl_table=11 PYKB01001283.1 Genbank gene 1631 1861 . + . ID=gene-C9F09_21955;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=C9F09_21955 PYKB01001283.1 Protein Homology CDS 1631 1861 . + 0 ID=cds-TGC81944.1;Parent=gene-C9F09_21955;Dbxref=NCBI_GP:TGC81944.1;Name=TGC81944.1;Note=in Escherichia coli this protein putatively regulates the sodium/proton (also pH-independent calcium/proton) antiporter chaA%3B has weak affinity for calcium and magnesium ions;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455733.1;locus_tag=C9F09_21955;product=cation transport regulator;protein_id=TGC81944.1;transl_table=11 PYKB01001283.1 Genbank gene 1941 2294 . - . ID=gene-C9F09_21960;Name=C9F09_21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21960 PYKB01001283.1 Protein Homology CDS 1941 2294 . - 0 ID=cds-TGC81943.1;Parent=gene-C9F09_21960;Dbxref=NCBI_GP:TGC81943.1;Name=TGC81943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455734.1;locus_tag=C9F09_21960;product=hypothetical protein;protein_id=TGC81943.1;transl_table=11 ##sequence-region PYKB01000356.1 1 2385 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000356.1 Genbank region 1 2385 . + . ID=PYKB01000356.1:1..2385;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000356.1 Genbank gene 1 385 . - . ID=gene-C9F09_04015;Name=C9F09_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04015;partial=true;start_range=.,1 PYKB01000356.1 Protein Homology CDS 1 385 . - 0 ID=cds-TGD00365.1;Parent=gene-C9F09_04015;Dbxref=NCBI_GP:TGD00365.1;Name=TGD00365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=C9F09_04015;partial=true;product=murein hydrolase effector protein LrgB;protein_id=TGD00365.1;start_range=.,1;transl_table=11 PYKB01000356.1 Genbank gene 378 788 . - . ID=gene-C9F09_04020;Name=C9F09_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04020 PYKB01000356.1 Protein Homology CDS 378 788 . - 0 ID=cds-TGD00367.1;Parent=gene-C9F09_04020;Dbxref=NCBI_GP:TGD00367.1;Name=TGD00367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458569.1;locus_tag=C9F09_04020;product=CidA/LrgA family protein;protein_id=TGD00367.1;transl_table=11 PYKB01000356.1 Genbank gene 892 1779 . + . ID=gene-C9F09_04025;Name=C9F09_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04025 PYKB01000356.1 Protein Homology CDS 892 1779 . + 0 ID=cds-TGD00366.1;Parent=gene-C9F09_04025;Dbxref=NCBI_GP:TGD00366.1;Name=TGD00366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=C9F09_04025;product=LysR family transcriptional regulator;protein_id=TGD00366.1;transl_table=11 PYKB01000356.1 Genbank gene 1874 2385 . - . ID=gene-C9F09_04030;Name=C9F09_04030;end_range=2385,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04030;partial=true PYKB01000356.1 Protein Homology CDS 1874 2385 . - 2 ID=cds-TGD00368.1;Parent=gene-C9F09_04030;Dbxref=NCBI_GP:TGD00368.1;Name=TGD00368.1;end_range=2385,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458567.1;locus_tag=C9F09_04030;partial=true;product=Na+/H+ antiporter;protein_id=TGD00368.1;transl_table=11 ##sequence-region PYKB01001606.1 1 2381 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001606.1 Genbank region 1 2381 . + . ID=PYKB01001606.1:1..2381;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001606.1 Genbank gene 3 224 . - . ID=gene-C9F09_28170;Name=C9F09_28170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28170 PYKB01001606.1 Protein Homology CDS 3 224 . - 0 ID=cds-TGC74723.1;Parent=gene-C9F09_28170;Dbxref=NCBI_GP:TGC74723.1;Name=TGC74723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458391.1;locus_tag=C9F09_28170;product=hypothetical protein;protein_id=TGC74723.1;transl_table=11 PYKB01001606.1 Genbank pseudogene 234 2294 . - . ID=gene-C9F09_28175;Name=C9F09_28175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28175;pseudo=true PYKB01001606.1 Protein Homology CDS 234 2294 . - 0 ID=cds-C9F09_28175;Parent=gene-C9F09_28175;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=C9F09_28175;product=maltodextrin phosphorylase;pseudo=true;transl_table=11 ##sequence-region PYKB01000490.1 1 2378 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000490.1 Genbank region 1 2378 . + . ID=PYKB01000490.1:1..2378;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000490.1 Genbank gene 1 1889 . - . ID=gene-C9F09_06200;Name=C9F09_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06200;partial=true;start_range=.,1 PYKB01000490.1 Protein Homology CDS 1 1889 . - 0 ID=cds-TGC97847.1;Parent=gene-C9F09_06200;Dbxref=NCBI_GP:TGC97847.1;Name=TGC97847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=C9F09_06200;partial=true;product=hypothetical protein;protein_id=TGC97847.1;start_range=.,1;transl_table=11 PYKB01000490.1 Genbank gene 2153 2378 . + . ID=gene-C9F09_06205;Name=C9F09_06205;end_range=2378,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06205;partial=true PYKB01000490.1 Protein Homology CDS 2153 2378 . + 0 ID=cds-TGC97848.1;Parent=gene-C9F09_06205;Dbxref=NCBI_GP:TGC97848.1;Name=TGC97848.1;end_range=2378,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=C9F09_06205;partial=true;product=AraC family transcriptional regulator;protein_id=TGC97848.1;transl_table=11 ##sequence-region PYKB01001065.1 1 2371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001065.1 Genbank region 1 2371 . + . ID=PYKB01001065.1:1..2371;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001065.1 Genbank pseudogene 67 486 . + . ID=gene-C9F09_17835;Name=C9F09_17835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17835;pseudo=true PYKB01001065.1 Protein Homology CDS 67 486 . + 0 ID=cds-C9F09_17835;Parent=gene-C9F09_17835;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458790.1;locus_tag=C9F09_17835;product=arginine ABC transporter substrate-binding protein;pseudo=true;transl_table=11 PYKB01001065.1 Genbank gene 548 1093 . - . ID=gene-C9F09_17840;Name=C9F09_17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17840 PYKB01001065.1 Protein Homology CDS 548 1093 . - 0 ID=cds-TGC86826.1;Parent=gene-C9F09_17840;Dbxref=NCBI_GP:TGC86826.1;Name=TGC86826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458789.1;locus_tag=C9F09_17840;product=oligoribonuclease;protein_id=TGC86826.1;transl_table=11 PYKB01001065.1 Genbank gene 1176 2252 . + . ID=gene-C9F09_17845;Name=C9F09_17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17845 PYKB01001065.1 Protein Homology CDS 1176 2252 . + 0 ID=cds-TGC86827.1;Parent=gene-C9F09_17845;Dbxref=NCBI_GP:TGC86827.1;Name=TGC86827.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463213.3;locus_tag=C9F09_17845;product=ribosome biogenesis GTPase RsgA;protein_id=TGC86827.1;transl_table=11 ##sequence-region PYKB01001708.1 1 2366 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001708.1 Genbank region 1 2366 . + . ID=PYKB01001708.1:1..2366;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001708.1 Genbank gene 69 1910 . + . ID=gene-C9F09_29840;Name=C9F09_29840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29840 PYKB01001708.1 Protein Homology CDS 69 1910 . + 0 ID=cds-TGC71809.1;Parent=gene-C9F09_29840;Dbxref=NCBI_GP:TGC71809.1;Name=TGC71809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=C9F09_29840;product=NADH-quinone oxidoreductase subunit L;protein_id=TGC71809.1;transl_table=11 PYKB01001708.1 Genbank gene 1987 2366 . + . ID=gene-C9F09_29845;Name=C9F09_29845;end_range=2366,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29845;partial=true PYKB01001708.1 Protein Homology CDS 1987 2366 . + 0 ID=cds-TGC71810.1;Parent=gene-C9F09_29845;Dbxref=NCBI_GP:TGC71810.1;Name=TGC71810.1;end_range=2366,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=C9F09_29845;partial=true;product=NADH-quinone oxidoreductase subunit M;protein_id=TGC71810.1;transl_table=11 ##sequence-region PYKB01000624.1 1 2365 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000624.1 Genbank region 1 2365 . + . ID=PYKB01000624.1:1..2365;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000624.1 Genbank gene 1 372 . - . ID=gene-C9F09_09260;Name=C9F09_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09260;partial=true;start_range=.,1 PYKB01000624.1 Protein Homology CDS 1 372 . - 0 ID=cds-TGC94857.1;Parent=gene-C9F09_09260;Dbxref=NCBI_GP:TGC94857.1;Name=TGC94857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454945.1;locus_tag=C9F09_09260;partial=true;product=hypothetical protein;protein_id=TGC94857.1;start_range=.,1;transl_table=11 PYKB01000624.1 Genbank gene 345 1088 . - . ID=gene-C9F09_09265;Name=C9F09_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09265 PYKB01000624.1 Protein Homology CDS 345 1088 . - 0 ID=cds-TGC94856.1;Parent=gene-C9F09_09265;Dbxref=NCBI_GP:TGC94856.1;Name=TGC94856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=C9F09_09265;product=response regulator;protein_id=TGC94856.1;transl_table=11 PYKB01000624.1 Genbank gene 1188 2267 . - . ID=gene-C9F09_09270;Name=C9F09_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09270 PYKB01000624.1 Protein Homology CDS 1188 2267 . - 0 ID=cds-TGC94858.1;Parent=gene-C9F09_09270;Dbxref=NCBI_GP:TGC94858.1;Name=TGC94858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001802610.1;locus_tag=C9F09_09270;product=EAL domain-containing protein;protein_id=TGC94858.1;transl_table=11 ##sequence-region PYKB01000438.1 1 9101 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000438.1 Genbank region 1 9101 . + . ID=PYKB01000438.1:1..9101;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000438.1 Genbank gene 95 652 . - . ID=gene-C9F09_05320;Name=C9F09_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05320 PYKB01000438.1 Protein Homology CDS 95 652 . - 0 ID=cds-TGC98835.1;Parent=gene-C9F09_05320;Dbxref=NCBI_GP:TGC98835.1;Name=TGC98835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=C9F09_05320;product=fimbrial protein SthD;protein_id=TGC98835.1;transl_table=11 PYKB01000438.1 Genbank gene 670 3207 . - . ID=gene-C9F09_05325;Name=C9F09_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05325 PYKB01000438.1 Protein Homology CDS 670 3207 . - 0 ID=cds-TGC98836.1;Parent=gene-C9F09_05325;Dbxref=NCBI_GP:TGC98836.1;Name=TGC98836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=C9F09_05325;product=fimbrial biogenesis outer membrane usher protein;protein_id=TGC98836.1;transl_table=11 PYKB01000438.1 Genbank gene 3253 3936 . - . ID=gene-C9F09_05330;Name=C9F09_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05330 PYKB01000438.1 Protein Homology CDS 3253 3936 . - 0 ID=cds-TGC98837.1;Parent=gene-C9F09_05330;Dbxref=NCBI_GP:TGC98837.1;Name=TGC98837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458999.1;locus_tag=C9F09_05330;product=fimbrial assembly protein;protein_id=TGC98837.1;transl_table=11 PYKB01000438.1 Genbank gene 4007 4552 . - . ID=gene-C9F09_05335;Name=C9F09_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05335 PYKB01000438.1 Protein Homology CDS 4007 4552 . - 0 ID=cds-TGC98838.1;Parent=gene-C9F09_05335;Dbxref=NCBI_GP:TGC98838.1;Name=TGC98838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=C9F09_05335;product=fimbrial protein SthA;protein_id=TGC98838.1;transl_table=11 PYKB01000438.1 Genbank gene 4891 5562 . - . ID=gene-C9F09_05340;Name=C9F09_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05340 PYKB01000438.1 Protein Homology CDS 4891 5562 . - 0 ID=cds-TGC98839.1;Parent=gene-C9F09_05340;Dbxref=NCBI_GP:TGC98839.1;Name=TGC98839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=C9F09_05340;product=hypothetical protein;protein_id=TGC98839.1;transl_table=11 PYKB01000438.1 Genbank gene 5947 6261 . - . ID=gene-C9F09_05345;Name=C9F09_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05345 PYKB01000438.1 Protein Homology CDS 5947 6261 . - 0 ID=cds-TGC98840.1;Parent=gene-C9F09_05345;Dbxref=NCBI_GP:TGC98840.1;Name=TGC98840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=C9F09_05345;product=hypothetical protein;protein_id=TGC98840.1;transl_table=11 PYKB01000438.1 Genbank gene 6528 7244 . - . ID=gene-C9F09_05350;Name=C9F09_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05350 PYKB01000438.1 Protein Homology CDS 6528 7244 . - 0 ID=cds-TGC98841.1;Parent=gene-C9F09_05350;Dbxref=NCBI_GP:TGC98841.1;Name=TGC98841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856501.1;locus_tag=C9F09_05350;product=two-component system response regulator ArcA;protein_id=TGC98841.1;transl_table=11 PYKB01000438.1 Genbank gene 7340 7480 . + . ID=gene-C9F09_05355;Name=C9F09_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05355 PYKB01000438.1 Protein Homology CDS 7340 7480 . + 0 ID=cds-TGC98842.1;Parent=gene-C9F09_05355;Dbxref=NCBI_GP:TGC98842.1;Name=TGC98842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459004.1;locus_tag=C9F09_05355;product=hypothetical protein;protein_id=TGC98842.1;transl_table=11 PYKB01000438.1 Genbank gene 7880 8557 . + . ID=gene-C9F09_05360;Name=C9F09_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05360 PYKB01000438.1 Protein Homology CDS 7880 8557 . + 0 ID=cds-TGC98843.1;Parent=gene-C9F09_05360;Dbxref=NCBI_GP:TGC98843.1;Name=TGC98843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155643.1;locus_tag=C9F09_05360;product=tRNA/rRNA methyltransferase;protein_id=TGC98843.1;transl_table=11 PYKB01000438.1 Genbank gene 8779 8844 . + . ID=gene-C9F09_05365;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=C9F09_05365 PYKB01000438.1 Protein Homology CDS 8779 8844 . + 0 ID=cds-TGC98844.1;Parent=gene-C9F09_05365;Dbxref=NCBI_GP:TGC98844.1;Name=TGC98844.1;gbkey=CDS;gene=thrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454611.1;locus_tag=C9F09_05365;product=thr operon leader peptide;protein_id=TGC98844.1;transl_table=11 ##sequence-region PYKB01001537.1 1 17995 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001537.1 Genbank region 1 17995 . + . ID=PYKB01001537.1:1..17995;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001537.1 Genbank gene 1 653 . + . ID=gene-C9F09_26735;Name=C9F09_26735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26735;partial=true;start_range=.,1 PYKB01001537.1 Protein Homology CDS 1 653 . + 2 ID=cds-TGC76300.1;Parent=gene-C9F09_26735;Dbxref=NCBI_GP:TGC76300.1;Name=TGC76300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=C9F09_26735;partial=true;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=TGC76300.1;start_range=.,1;transl_table=11 PYKB01001537.1 Genbank gene 1375 2271 . - . ID=gene-C9F09_26740;Name=C9F09_26740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26740 PYKB01001537.1 Protein Homology CDS 1375 2271 . - 0 ID=cds-TGC76301.1;Parent=gene-C9F09_26740;Dbxref=NCBI_GP:TGC76301.1;Name=TGC76301.1;Note=induced within macrophages%3B necessary for the resistance to antimicrobials;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457181.1;locus_tag=C9F09_26740;product=antimicrobial resistance protein Mig-14;protein_id=TGC76301.1;transl_table=11 PYKB01001537.1 Genbank gene 2268 2465 . - . ID=gene-C9F09_26745;Name=C9F09_26745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26745 PYKB01001537.1 Protein Homology CDS 2268 2465 . - 0 ID=cds-TGC76302.1;Parent=gene-C9F09_26745;Dbxref=NCBI_GP:TGC76302.1;Name=TGC76302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574832.1;locus_tag=C9F09_26745;product=hypothetical protein;protein_id=TGC76302.1;transl_table=11 PYKB01001537.1 Genbank gene 2565 3494 . - . ID=gene-C9F09_26750;Name=C9F09_26750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26750 PYKB01001537.1 Protein Homology CDS 2565 3494 . - 0 ID=cds-TGC76303.1;Parent=gene-C9F09_26750;Dbxref=NCBI_GP:TGC76303.1;Name=TGC76303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457180.1;locus_tag=C9F09_26750;product=DUF535 domain-containing protein;protein_id=TGC76303.1;transl_table=11 PYKB01001537.1 Genbank gene 4013 5065 . + . ID=gene-C9F09_26755;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=protein_coding;locus_tag=C9F09_26755 PYKB01001537.1 Protein Homology CDS 4013 5065 . + 0 ID=cds-TGC76304.1;Parent=gene-C9F09_26755;Dbxref=NCBI_GP:TGC76304.1;Name=TGC76304.1;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=C9F09_26755;product=SPI-2 type III secretion system effector PipB2;protein_id=TGC76304.1;transl_table=11 PYKB01001537.1 Genbank gene 5240 5572 . + . ID=gene-C9F09_26760;Name=C9F09_26760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26760 PYKB01001537.1 Protein Homology CDS 5240 5572 . + 0 ID=cds-TGC76305.1;Parent=gene-C9F09_26760;Dbxref=NCBI_GP:TGC76305.1;Name=TGC76305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449164.1;locus_tag=C9F09_26760;product=hypothetical protein;protein_id=TGC76305.1;transl_table=11 PYKB01001537.1 Genbank gene 5514 5756 . - . ID=gene-C9F09_26765;Name=C9F09_26765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26765 PYKB01001537.1 Protein Homology CDS 5514 5756 . - 0 ID=cds-TGC76306.1;Parent=gene-C9F09_26765;Dbxref=NCBI_GP:TGC76306.1;Name=TGC76306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233098.1;locus_tag=C9F09_26765;product=hypothetical protein;protein_id=TGC76306.1;transl_table=11 PYKB01001537.1 Genbank gene 6086 8266 . + . ID=gene-C9F09_26770;Name=C9F09_26770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26770 PYKB01001537.1 Protein Homology CDS 6086 8266 . + 0 ID=cds-TGC76307.1;Parent=gene-C9F09_26770;Dbxref=NCBI_GP:TGC76307.1;Name=TGC76307.1;Note=Fep%3B Cbt%3B Cbr%3B FeuB%3B FepA%3B PfeA%3B IroN%3B BfeA%3B outer membrane receptor of ferric enterobactin and colicins B and D%3B interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461704.3;locus_tag=C9F09_26770;product=TonB-dependent siderophore receptor;protein_id=TGC76307.1;transl_table=11 PYKB01001537.1 Genbank gene 8308 9243 . - . ID=gene-C9F09_26775;Name=C9F09_26775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26775 PYKB01001537.1 Protein Homology CDS 8308 9243 . - 0 ID=cds-TGC76308.1;Parent=gene-C9F09_26775;Dbxref=NCBI_GP:TGC76308.1;Name=TGC76308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=C9F09_26775;product=hydrolase;protein_id=TGC76308.1;transl_table=11 PYKB01001537.1 Genbank gene 9275 10519 . - . ID=gene-C9F09_26780;Name=C9F09_26780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26780 PYKB01001537.1 Protein Homology CDS 9275 10519 . - 0 ID=cds-TGC76309.1;Parent=gene-C9F09_26780;Dbxref=NCBI_GP:TGC76309.1;Name=TGC76309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=C9F09_26780;product=enterochelin esterase;protein_id=TGC76309.1;transl_table=11 PYKB01001537.1 Genbank gene 10629 14285 . - . ID=gene-C9F09_26785;Name=C9F09_26785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26785 PYKB01001537.1 Protein Homology CDS 10629 14285 . - 0 ID=cds-TGC76310.1;Parent=gene-C9F09_26785;Dbxref=NCBI_GP:TGC76310.1;Name=TGC76310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457174.1;locus_tag=C9F09_26785;product=multidrug ABC transporter ATP-binding protein;protein_id=TGC76310.1;transl_table=11 PYKB01001537.1 Genbank gene 14366 15481 . - . ID=gene-C9F09_26790;Name=C9F09_26790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26790 PYKB01001537.1 Protein Homology CDS 14366 15481 . - 0 ID=cds-TGC76311.1;Parent=gene-C9F09_26790;Dbxref=NCBI_GP:TGC76311.1;Name=TGC76311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=C9F09_26790;product=glycosyl transferase;protein_id=TGC76311.1;transl_table=11 PYKB01001537.1 Genbank gene 15586 15768 . - . ID=gene-C9F09_26795;Name=C9F09_26795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26795 PYKB01001537.1 Protein Homology CDS 15586 15768 . - 0 ID=cds-TGC76312.1;Parent=gene-C9F09_26795;Dbxref=NCBI_GP:TGC76312.1;Name=TGC76312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530982.1;locus_tag=C9F09_26795;product=hypothetical protein;protein_id=TGC76312.1;transl_table=11 PYKB01001537.1 Genbank gene 15735 15929 . - . ID=gene-C9F09_26800;Name=C9F09_26800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26800 PYKB01001537.1 Protein Homology CDS 15735 15929 . - 0 ID=cds-TGC76313.1;Parent=gene-C9F09_26800;Dbxref=NCBI_GP:TGC76313.1;Name=TGC76313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341456.1;locus_tag=C9F09_26800;product=hypothetical protein;protein_id=TGC76313.1;transl_table=11 PYKB01001537.1 Genbank gene 16409 16636 . + . ID=gene-C9F09_26805;Name=C9F09_26805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26805 PYKB01001537.1 Protein Homology CDS 16409 16636 . + 0 ID=cds-TGC76314.1;Parent=gene-C9F09_26805;Dbxref=NCBI_GP:TGC76314.1;Name=TGC76314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004590453.1;locus_tag=C9F09_26805;product=DUF1272 domain-containing protein;protein_id=TGC76314.1;transl_table=11 PYKB01001537.1 Genbank gene 16950 17777 . + . ID=gene-C9F09_26810;Name=C9F09_26810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26810 PYKB01001537.1 Protein Homology CDS 16950 17777 . + 0 ID=cds-TGC76315.1;Parent=gene-C9F09_26810;Dbxref=NCBI_GP:TGC76315.1;Name=TGC76315.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13676.4;locus_tag=C9F09_26810;product=hypothetical protein;protein_id=TGC76315.1;transl_table=11 PYKB01001537.1 Genbank gene 17785 17995 . - . ID=gene-C9F09_26815;Name=C9F09_26815;end_range=17995,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26815;partial=true PYKB01001537.1 Protein Homology CDS 17785 17995 . - 1 ID=cds-TGC76316.1;Parent=gene-C9F09_26815;Dbxref=NCBI_GP:TGC76316.1;Name=TGC76316.1;end_range=17995,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=C9F09_26815;partial=true;product=IS3 family transposase;protein_id=TGC76316.1;transl_table=11 ##sequence-region PYKB01001263.1 1 2363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001263.1 Genbank region 1 2363 . + . ID=PYKB01001263.1:1..2363;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001263.1 Genbank gene 264 935 . + . ID=gene-C9F09_21575;Name=C9F09_21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21575 PYKB01001263.1 Protein Homology CDS 264 935 . + 0 ID=cds-TGC82259.1;Parent=gene-C9F09_21575;Dbxref=NCBI_GP:TGC82259.1;Name=TGC82259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458939.1;locus_tag=C9F09_21575;product=hypothetical protein;protein_id=TGC82259.1;transl_table=11 PYKB01001263.1 Genbank gene 932 1393 . + . ID=gene-C9F09_21580;Name=C9F09_21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21580 PYKB01001263.1 Protein Homology CDS 932 1393 . + 0 ID=cds-TGC82260.1;Parent=gene-C9F09_21580;Dbxref=NCBI_GP:TGC82260.1;Name=TGC82260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458938.1;locus_tag=C9F09_21580;product=hypothetical protein;protein_id=TGC82260.1;transl_table=11 PYKB01001263.1 Genbank gene 1406 2363 . + . ID=gene-C9F09_21585;Name=C9F09_21585;end_range=2363,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21585;partial=true PYKB01001263.1 Protein Homology CDS 1406 2363 . + 0 ID=cds-TGC82261.1;Parent=gene-C9F09_21585;Dbxref=NCBI_GP:TGC82261.1;Name=TGC82261.1;end_range=2363,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458937.1;locus_tag=C9F09_21585;partial=true;product=beta-aspartyl-peptidase;protein_id=TGC82261.1;transl_table=11 ##sequence-region PYKB01000866.1 1 2355 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000866.1 Genbank region 1 2355 . + . ID=PYKB01000866.1:1..2355;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000866.1 Genbank gene 1 607 . + . ID=gene-C9F09_14015;Name=C9F09_14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14015;partial=true;start_range=.,1 PYKB01000866.1 Protein Homology CDS 1 607 . + 1 ID=cds-TGC90870.1;Parent=gene-C9F09_14015;Dbxref=NCBI_GP:TGC90870.1;Name=TGC90870.1;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=C9F09_14015;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGC90870.1;start_range=.,1;transl_table=11 PYKB01000866.1 Genbank gene 622 1875 . + . ID=gene-C9F09_14020;Name=C9F09_14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14020 PYKB01000866.1 Protein Homology CDS 622 1875 . + 0 ID=cds-TGC90871.1;Parent=gene-C9F09_14020;Dbxref=NCBI_GP:TGC90871.1;Name=TGC90871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455561.1;locus_tag=C9F09_14020;product=paraquat-inducible protein A;protein_id=TGC90871.1;transl_table=11 PYKB01000866.1 Genbank gene 1880 2355 . + . ID=gene-C9F09_14025;Name=C9F09_14025;end_range=2355,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14025;partial=true PYKB01000866.1 Protein Homology CDS 1880 2355 . + 0 ID=cds-TGC90872.1;Parent=gene-C9F09_14025;Dbxref=NCBI_GP:TGC90872.1;Name=TGC90872.1;end_range=2355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455562.1;locus_tag=C9F09_14025;partial=true;product=paraquat-inducible protein B;protein_id=TGC90872.1;transl_table=11 ##sequence-region PYKB01000934.1 1 2349 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000934.1 Genbank region 1 2349 . + . ID=PYKB01000934.1:1..2349;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000934.1 Genbank gene 1 398 . + . ID=gene-C9F09_15405;Name=C9F09_15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15405;partial=true;start_range=.,1 PYKB01000934.1 Protein Homology CDS 1 398 . + 2 ID=cds-TGC89655.1;Parent=gene-C9F09_15405;Dbxref=NCBI_GP:TGC89655.1;Name=TGC89655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455130.1;locus_tag=C9F09_15405;partial=true;product=hypothetical protein;protein_id=TGC89655.1;start_range=.,1;transl_table=11 PYKB01000934.1 Genbank gene 489 1874 . - . ID=gene-C9F09_15410;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=C9F09_15410 PYKB01000934.1 Protein Homology CDS 489 1874 . - 0 ID=cds-TGC89656.1;Parent=gene-C9F09_15410;Dbxref=NCBI_GP:TGC89656.1;Name=TGC89656.1;gbkey=CDS;gene=cysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=C9F09_15410;product=cysteine--tRNA ligase;protein_id=TGC89656.1;transl_table=11 PYKB01000934.1 Genbank gene 2047 2349 . + . ID=gene-C9F09_15415;Name=C9F09_15415;end_range=2349,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15415;partial=true PYKB01000934.1 Protein Homology CDS 2047 2349 . + 0 ID=cds-TGC89657.1;Parent=gene-C9F09_15415;Dbxref=NCBI_GP:TGC89657.1;Name=TGC89657.1;end_range=2349,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455128.1;locus_tag=C9F09_15415;partial=true;product=peptidylprolyl isomerase;protein_id=TGC89657.1;transl_table=11 ##sequence-region PYKB01000679.1 1 2348 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000679.1 Genbank region 1 2348 . + . ID=PYKB01000679.1:1..2348;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000679.1 Genbank gene 292 675 . + . ID=gene-C9F09_10135;Name=C9F09_10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10135 PYKB01000679.1 Protein Homology CDS 292 675 . + 0 ID=cds-TGC93984.1;Parent=gene-C9F09_10135;Dbxref=NCBI_GP:TGC93984.1;Name=TGC93984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=C9F09_10135;product=protein translocase subunit SecE;protein_id=TGC93984.1;transl_table=11 PYKB01000679.1 Genbank gene 677 1222 . + . ID=gene-C9F09_10140;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=C9F09_10140 PYKB01000679.1 Protein Homology CDS 677 1222 . + 0 ID=cds-TGC93985.1;Parent=gene-C9F09_10140;Dbxref=NCBI_GP:TGC93985.1;Name=TGC93985.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=C9F09_10140;product=transcription termination/antitermination protein NusG;protein_id=TGC93985.1;transl_table=11 PYKB01000679.1 Genbank gene 1380 1808 . + . ID=gene-C9F09_10145;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=C9F09_10145 PYKB01000679.1 Protein Homology CDS 1380 1808 . + 0 ID=cds-TGC93986.1;Parent=gene-C9F09_10145;Dbxref=NCBI_GP:TGC93986.1;Name=TGC93986.1;gbkey=CDS;gene=rplK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312933.1;locus_tag=C9F09_10145;product=50S ribosomal protein L11;protein_id=TGC93986.1;transl_table=11 PYKB01000679.1 Genbank gene 1812 2348 . + . ID=gene-C9F09_10150;Name=C9F09_10150;end_range=2348,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10150;partial=true PYKB01000679.1 Protein Homology CDS 1812 2348 . + 0 ID=cds-TGC93987.1;Parent=gene-C9F09_10150;Dbxref=NCBI_GP:TGC93987.1;Name=TGC93987.1;end_range=2348,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457920.1;locus_tag=C9F09_10150;partial=true;product=50S ribosomal protein L1;protein_id=TGC93987.1;transl_table=11 ##sequence-region PYKB01001608.1 1 2347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001608.1 Genbank region 1 2347 . + . ID=PYKB01001608.1:1..2347;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001608.1 Genbank pseudogene 85 741 . + . ID=gene-C9F09_28195;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=pseudogene;locus_tag=C9F09_28195;pseudo=true PYKB01001608.1 Protein Homology CDS 85 741 . + 0 ID=cds-C9F09_28195;Parent=gene-C9F09_28195;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=trmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=C9F09_28195;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;pseudo=true;transl_table=11 PYKB01001608.1 Genbank gene 782 1129 . + . ID=gene-C9F09_28200;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=C9F09_28200 PYKB01001608.1 Protein Homology CDS 782 1129 . + 0 ID=cds-TGC74699.1;Parent=gene-C9F09_28200;Dbxref=NCBI_GP:TGC74699.1;Name=TGC74699.1;gbkey=CDS;gene=rplS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457143.1;locus_tag=C9F09_28200;product=50S ribosomal protein L19;protein_id=TGC74699.1;transl_table=11 PYKB01001608.1 Genbank gene 1286 2347 . - . ID=gene-C9F09_28205;Name=C9F09_28205;end_range=2347,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28205;partial=true PYKB01001608.1 Protein Homology CDS 1286 2347 . - 0 ID=cds-TGC74700.1;Parent=gene-C9F09_28205;Dbxref=NCBI_GP:TGC74700.1;Name=TGC74700.1;end_range=2347,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=C9F09_28205;partial=true;product=diguanylate cyclase;protein_id=TGC74700.1;transl_table=11 ##sequence-region PYKB01001694.1 1 2345 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001694.1 Genbank region 1 2345 . + . ID=PYKB01001694.1:1..2345;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001694.1 Genbank pseudogene 62 754 . - . ID=gene-C9F09_29600;Name=C9F09_29600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29600;pseudo=true PYKB01001694.1 Protein Homology CDS 62 754 . - 0 ID=cds-C9F09_29600;Parent=gene-C9F09_29600;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455052.1;locus_tag=C9F09_29600;product=7-cyano-7-deazaguanine synthase QueC;pseudo=true;transl_table=11 PYKB01001694.1 Genbank gene 819 2345 . - . ID=gene-C9F09_29605;Name=C9F09_29605;end_range=2345,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29605;partial=true PYKB01001694.1 Protein Homology CDS 819 2345 . - 0 ID=cds-TGC72253.1;Parent=gene-C9F09_29605;Dbxref=NCBI_GP:TGC72253.1;Name=TGC72253.1;end_range=2345,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001238172.1;locus_tag=C9F09_29605;partial=true;product=peptide ABC transporter substrate-binding protein;protein_id=TGC72253.1;transl_table=11 ##sequence-region PYKB01000998.1 1 2342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000998.1 Genbank region 1 2342 . + . ID=PYKB01000998.1:1..2342;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000998.1 Genbank gene 1 623 . - . ID=gene-C9F09_16655;Name=C9F09_16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16655;partial=true;start_range=.,1 PYKB01000998.1 Protein Homology CDS 1 623 . - 0 ID=cds-TGC88225.1;Parent=gene-C9F09_16655;Dbxref=NCBI_GP:TGC88225.1;Name=TGC88225.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=C9F09_16655;partial=true;product=periplasmic nitrate reductase subunit alpha;protein_id=TGC88225.1;start_range=.,1;transl_table=11 PYKB01000998.1 Genbank gene 620 883 . - . ID=gene-C9F09_16660;Name=C9F09_16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16660 PYKB01000998.1 Protein Homology CDS 620 883 . - 0 ID=cds-TGC88226.1;Parent=gene-C9F09_16660;Dbxref=NCBI_GP:TGC88226.1;Name=TGC88226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456805.1;locus_tag=C9F09_16660;product=nitrate reductase;protein_id=TGC88226.1;transl_table=11 PYKB01000998.1 Genbank gene 873 1364 . - . ID=gene-C9F09_16665;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=C9F09_16665 PYKB01000998.1 Protein Homology CDS 873 1364 . - 0 ID=cds-TGC88227.1;Parent=gene-C9F09_16665;Dbxref=NCBI_GP:TGC88227.1;Name=TGC88227.1;gbkey=CDS;gene=napF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=C9F09_16665;product=ferredoxin-type protein NapF;protein_id=TGC88227.1;transl_table=11 PYKB01000998.1 Genbank gene 1778 2272 . + . ID=gene-C9F09_16670;Name=C9F09_16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16670 PYKB01000998.1 Protein Homology CDS 1778 2272 . + 0 ID=cds-TGC88228.1;Parent=gene-C9F09_16670;Dbxref=NCBI_GP:TGC88228.1;Name=TGC88228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=C9F09_16670;product=ecotin;protein_id=TGC88228.1;transl_table=11 ##sequence-region PYKB01001160.1 1 2333 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001160.1 Genbank region 1 2333 . + . ID=PYKB01001160.1:1..2333;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001160.1 Genbank gene 77 199 . - . ID=gene-C9F09_19605;Name=C9F09_19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19605 PYKB01001160.1 Protein Homology CDS 77 199 . - 0 ID=cds-TGC84521.1;Parent=gene-C9F09_19605;Dbxref=NCBI_GP:TGC84521.1;Name=TGC84521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=C9F09_19605;product=glucose uptake inhibitor SgrT;protein_id=TGC84521.1;transl_table=11 PYKB01001160.1 Genbank gene 292 1950 . + . ID=gene-C9F09_19610;Name=C9F09_19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19610 PYKB01001160.1 Protein Homology CDS 292 1950 . + 0 ID=cds-TGC84522.1;Parent=gene-C9F09_19610;Dbxref=NCBI_GP:TGC84522.1;Name=TGC84522.1;Note=activates sgrS under glucose-phosphate stress conditions;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454721.1;locus_tag=C9F09_19610;product=transcriptional regulator;protein_id=TGC84522.1;transl_table=11 PYKB01001160.1 cmsearch riboswitch 1997 2096 . + . ID=id-PYKB01001160.1:1997..2096;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00059,COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PYKB01001160.1 Genbank gene 2128 2333 . + . ID=gene-C9F09_19615;Name=tbpA;end_range=2333,.;gbkey=Gene;gene=tbpA;gene_biotype=protein_coding;locus_tag=C9F09_19615;partial=true PYKB01001160.1 Protein Homology CDS 2128 2333 . + 0 ID=cds-TGC84523.1;Parent=gene-C9F09_19615;Dbxref=NCBI_GP:TGC84523.1;Name=TGC84523.1;Note=part of the thiamine and TPP transport system tbpA-thiPQ;end_range=2333,.;gbkey=CDS;gene=tbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454720.1;locus_tag=C9F09_19615;partial=true;product=thiamine ABC transporter substrate-binding protein;protein_id=TGC84523.1;transl_table=11 ##sequence-region PYKB01000920.1 1 2332 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000920.1 Genbank region 1 2332 . + . ID=PYKB01000920.1:1..2332;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000920.1 Genbank gene 1 1125 . - . ID=gene-C9F09_15130;Name=C9F09_15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15130;partial=true;start_range=.,1 PYKB01000920.1 Protein Homology CDS 1 1125 . - 0 ID=cds-TGC89832.1;Parent=gene-C9F09_15130;Dbxref=NCBI_GP:TGC89832.1;Name=TGC89832.1;Note=catalyzes the oxidation of formate to carbon dioxide and molecular hydrogen%3B formate hydrogenlyase comprises of a formate dehydrogenase%2C unidentified electron carriers and a hydrogenase (subunit 3);gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=C9F09_15130;partial=true;product=formate hydrogenlyase subunit 3;protein_id=TGC89832.1;start_range=.,1;transl_table=11 PYKB01000920.1 Genbank gene 1125 1733 . - . ID=gene-C9F09_15135;Name=C9F09_15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15135 PYKB01000920.1 Protein Homology CDS 1125 1733 . - 0 ID=cds-TGC89833.1;Parent=gene-C9F09_15135;Dbxref=NCBI_GP:TGC89833.1;Name=TGC89833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457246.1;locus_tag=C9F09_15135;product=4Fe-4S dicluster domain-containing protein;protein_id=TGC89833.1;transl_table=11 PYKB01000920.1 Genbank gene 1879 2332 . - . ID=gene-C9F09_15140;Name=C9F09_15140;end_range=2332,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15140;partial=true PYKB01000920.1 Protein Homology CDS 1879 2332 . - 1 ID=cds-TGC89834.1;Parent=gene-C9F09_15140;Dbxref=NCBI_GP:TGC89834.1;Name=TGC89834.1;Note=regulates several genes involved in the formate hydrogenlyase system%3B seems to prevent binding of FhlA transcriptional activator to the activator sequence of hyc operon;end_range=2332,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457247.1;locus_tag=C9F09_15140;partial=true;product=transcriptional regulator;protein_id=TGC89834.1;transl_table=11 ##sequence-region PYKB01001110.1 1 2332 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001110.1 Genbank region 1 2332 . + . ID=PYKB01001110.1:1..2332;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001110.1 Genbank pseudogene 98 364 . + . ID=gene-C9F09_18665;Name=C9F09_18665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18665;pseudo=true PYKB01001110.1 Protein Homology CDS 98 364 . + 0 ID=cds-C9F09_18665;Parent=gene-C9F09_18665;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457568.1;locus_tag=C9F09_18665;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 PYKB01001110.1 Genbank gene 475 2332 . + . ID=gene-C9F09_18670;Name=parC;end_range=2332,.;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=C9F09_18670;partial=true PYKB01001110.1 Protein Homology CDS 475 2332 . + 0 ID=cds-TGC85744.1;Parent=gene-C9F09_18670;Dbxref=NCBI_GP:TGC85744.1;Name=TGC85744.1;end_range=2332,.;gbkey=CDS;gene=parC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001639862.1;locus_tag=C9F09_18670;partial=true;product=DNA topoisomerase IV subunit A;protein_id=TGC85744.1;transl_table=11 ##sequence-region PYKB01001507.1 1 9096 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001507.1 Genbank region 1 9096 . + . ID=PYKB01001507.1:1..9096;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001507.1 Genbank pseudogene 43 270 . + . ID=gene-C9F09_26145;Name=C9F09_26145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_26145;pseudo=true PYKB01001507.1 Protein Homology CDS 43 270 . + 0 ID=cds-C9F09_26145;Parent=gene-C9F09_26145;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558297.1;locus_tag=C9F09_26145;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001507.1 Genbank gene 364 440 . - . ID=gene-C9F09_26150;Name=C9F09_26150;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_26150 PYKB01001507.1 tRNAscan-SE tRNA 364 440 . - . ID=rna-C9F09_26150;Parent=gene-C9F09_26150;anticodon=(pos:complement(404..406));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_26150;product=tRNA-Arg PYKB01001507.1 tRNAscan-SE exon 364 440 . - . ID=exon-C9F09_26150-1;Parent=rna-C9F09_26150;anticodon=(pos:complement(404..406));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_26150;product=tRNA-Arg PYKB01001507.1 Genbank gene 503 739 . - . ID=gene-C9F09_26155;Name=C9F09_26155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26155 PYKB01001507.1 Protein Homology CDS 503 739 . - 0 ID=cds-TGC77077.1;Parent=gene-C9F09_26155;Dbxref=NCBI_GP:TGC77077.1;Name=TGC77077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523413.1;locus_tag=C9F09_26155;product=hypothetical protein;protein_id=TGC77077.1;transl_table=11 PYKB01001507.1 Genbank gene 695 1291 . + . ID=gene-C9F09_26160;Name=C9F09_26160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26160 PYKB01001507.1 Protein Homology CDS 695 1291 . + 0 ID=cds-TGC77078.1;Parent=gene-C9F09_26160;Dbxref=NCBI_GP:TGC77078.1;Name=TGC77078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455141.1;locus_tag=C9F09_26160;product=fimbriae biosynthesis transcriptional regulator FimW;protein_id=TGC77078.1;transl_table=11 PYKB01001507.1 Genbank gene 1453 1764 . + . ID=gene-C9F09_26165;Name=C9F09_26165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26165 PYKB01001507.1 Protein Homology CDS 1453 1764 . + 0 ID=cds-TGC77079.1;Parent=gene-C9F09_26165;Dbxref=NCBI_GP:TGC77079.1;Name=TGC77079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=C9F09_26165;product=diguanylate cyclase;protein_id=TGC77079.1;transl_table=11 PYKB01001507.1 Genbank gene 1783 2505 . + . ID=gene-C9F09_26170;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=C9F09_26170 PYKB01001507.1 Protein Homology CDS 1783 2505 . + 0 ID=cds-TGC77080.1;Parent=gene-C9F09_26170;Dbxref=NCBI_GP:TGC77080.1;Name=TGC77080.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=C9F09_26170;product=fimbriae biosynthesis regulator FimY;protein_id=TGC77080.1;transl_table=11 PYKB01001507.1 Genbank gene 3109 3741 . + . ID=gene-C9F09_26175;Name=C9F09_26175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26175 PYKB01001507.1 Protein Homology CDS 3109 3741 . + 0 ID=cds-TGC77081.1;Parent=gene-C9F09_26175;Dbxref=NCBI_GP:TGC77081.1;Name=TGC77081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455138.1;locus_tag=C9F09_26175;product=fimbriae biosynthesis transcriptional regulator FimZ;protein_id=TGC77081.1;transl_table=11 PYKB01001507.1 Genbank gene 3787 4305 . - . ID=gene-C9F09_26180;Name=C9F09_26180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26180 PYKB01001507.1 Protein Homology CDS 3787 4305 . - 0 ID=cds-TGC77082.1;Parent=gene-C9F09_26180;Dbxref=NCBI_GP:TGC77082.1;Name=TGC77082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=C9F09_26180;product=fimbriae assembly protein;protein_id=TGC77082.1;transl_table=11 PYKB01001507.1 Genbank gene 4315 5322 . - . ID=gene-C9F09_26185;Name=C9F09_26185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26185 PYKB01001507.1 Protein Homology CDS 4315 5322 . - 0 ID=cds-TGC77083.1;Parent=gene-C9F09_26185;Dbxref=NCBI_GP:TGC77083.1;Name=TGC77083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=C9F09_26185;product=type 1 fimbrin D-mannose specific adhesin FimH;protein_id=TGC77083.1;transl_table=11 PYKB01001507.1 Genbank gene 5337 7949 . - . ID=gene-C9F09_26190;Name=C9F09_26190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26190 PYKB01001507.1 Protein Homology CDS 5337 7949 . - 0 ID=cds-TGC77084.1;Parent=gene-C9F09_26190;Dbxref=NCBI_GP:TGC77084.1;Name=TGC77084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=C9F09_26190;product=fimbrial protein;protein_id=TGC77084.1;transl_table=11 PYKB01001507.1 Genbank gene 7980 8672 . - . ID=gene-C9F09_26195;Name=C9F09_26195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26195 PYKB01001507.1 Protein Homology CDS 7980 8672 . - 0 ID=cds-TGC77085.1;Parent=gene-C9F09_26195;Dbxref=NCBI_GP:TGC77085.1;Name=TGC77085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455134.1;locus_tag=C9F09_26195;product=molecular chaperone FimC;protein_id=TGC77085.1;transl_table=11 PYKB01001507.1 Genbank gene 8716 9096 . - . ID=gene-C9F09_26200;Name=fimI;end_range=9096,.;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=C9F09_26200;partial=true PYKB01001507.1 Protein Homology CDS 8716 9096 . - 0 ID=cds-TGC77086.1;Parent=gene-C9F09_26200;Dbxref=NCBI_GP:TGC77086.1;Name=TGC77086.1;end_range=9096,.;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=C9F09_26200;partial=true;product=type 1 fimbrial protein subunit FimI;protein_id=TGC77086.1;transl_table=11 ##sequence-region PYKB01000083.1 1 2328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000083.1 Genbank region 1 2328 . + . ID=PYKB01000083.1:1..2328;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000083.1 Genbank gene 97 1782 . - . ID=gene-C9F09_01005;Name=C9F09_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01005 PYKB01000083.1 Protein Homology CDS 97 1782 . - 0 ID=cds-TGD05820.1;Parent=gene-C9F09_01005;Dbxref=NCBI_GP:TGD05820.1;Name=TGD05820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=C9F09_01005;product=transporter;protein_id=TGD05820.1;transl_table=11 PYKB01000083.1 Genbank pseudogene 1927 2118 . - . ID=gene-C9F09_01010;Name=C9F09_01010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01010;pseudo=true PYKB01000083.1 Protein Homology CDS 1927 2118 . - 0 ID=cds-C9F09_01010;Parent=gene-C9F09_01010;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001337222.1;locus_tag=C9F09_01010;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000083.1 Genbank gene 2053 2328 . + . ID=gene-C9F09_01015;Name=C9F09_01015;end_range=2328,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01015;partial=true PYKB01000083.1 Protein Homology CDS 2053 2328 . + 0 ID=cds-TGD05821.1;Parent=gene-C9F09_01015;Dbxref=NCBI_GP:TGD05821.1;Name=TGD05821.1;end_range=2328,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=C9F09_01015;partial=true;product=hypothetical protein;protein_id=TGD05821.1;transl_table=11 ##sequence-region PYKB01000291.1 1 2328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000291.1 Genbank region 1 2328 . + . ID=PYKB01000291.1:1..2328;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000291.1 Genbank gene 1 1180 . - . ID=gene-C9F09_03330;Name=C9F09_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03330;partial=true;start_range=.,1 PYKB01000291.1 Protein Homology CDS 1 1180 . - 0 ID=cds-TGD01558.1;Parent=gene-C9F09_03330;Dbxref=NCBI_GP:TGD01558.1;Name=TGD01558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=C9F09_03330;partial=true;product=YjbH domain-containing protein;protein_id=TGD01558.1;start_range=.,1;transl_table=11 PYKB01000291.1 Genbank gene 1180 1917 . - . ID=gene-C9F09_03335;Name=C9F09_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03335 PYKB01000291.1 Protein Homology CDS 1180 1917 . - 0 ID=cds-TGD01559.1;Parent=gene-C9F09_03335;Dbxref=NCBI_GP:TGD01559.1;Name=TGD01559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458522.1;locus_tag=C9F09_03335;product=hypothetical protein;protein_id=TGD01559.1;transl_table=11 PYKB01000291.1 Genbank gene 1914 2328 . - . ID=gene-C9F09_03340;Name=C9F09_03340;end_range=2328,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03340;partial=true PYKB01000291.1 Protein Homology CDS 1914 2328 . - 1 ID=cds-TGD01560.1;Parent=gene-C9F09_03340;Dbxref=NCBI_GP:TGD01560.1;Name=TGD01560.1;end_range=2328,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458521.1;locus_tag=C9F09_03340;partial=true;product=hypothetical protein;protein_id=TGD01560.1;transl_table=11 ##sequence-region PYKB01001192.1 1 2325 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001192.1 Genbank region 1 2325 . + . ID=PYKB01001192.1:1..2325;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001192.1 Genbank pseudogene 88 231 . - . ID=gene-C9F09_20330;Name=C9F09_20330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_20330;pseudo=true PYKB01001192.1 Protein Homology CDS 88 231 . - 0 ID=cds-C9F09_20330;Parent=gene-C9F09_20330;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=C9F09_20330;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001192.1 Genbank gene 331 1653 . - . ID=gene-C9F09_20335;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=C9F09_20335 PYKB01001192.1 Protein Homology CDS 331 1653 . - 0 ID=cds-TGC83683.1;Parent=gene-C9F09_20335;Dbxref=NCBI_GP:TGC83683.1;Name=TGC83683.1;gbkey=CDS;gene=xylA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=C9F09_20335;product=xylose isomerase;protein_id=TGC83683.1;transl_table=11 PYKB01001192.1 Genbank gene 1740 1940 . - . ID=gene-C9F09_20340;Name=C9F09_20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20340 PYKB01001192.1 Protein Homology CDS 1740 1940 . - 0 ID=cds-TGC83684.1;Parent=gene-C9F09_20340;Dbxref=NCBI_GP:TGC83684.1;Name=TGC83684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664696.1;locus_tag=C9F09_20340;product=hypothetical protein;protein_id=TGC83684.1;transl_table=11 PYKB01001192.1 Genbank pseudogene 2016 2325 . + . ID=gene-C9F09_20345;Name=C9F09_20345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_20345;pseudo=true PYKB01001192.1 Protein Homology CDS 2016 2325 . + 0 ID=cds-C9F09_20345;Parent=gene-C9F09_20345;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458265.1;locus_tag=C9F09_20345;product=XylR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKB01000294.1 1 2316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000294.1 Genbank region 1 2316 . + . ID=PYKB01000294.1:1..2316;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000294.1 Genbank gene 1 2304 . + . ID=gene-C9F09_03360;Name=C9F09_03360;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F09_03360;partial=true;start_range=.,1 PYKB01000294.1 Genbank rRNA 1 2304 . + . ID=rna-C9F09_03360;Parent=gene-C9F09_03360;gbkey=rRNA;locus_tag=C9F09_03360;partial=true;product=23S ribosomal RNA;start_range=.,1 PYKB01000294.1 Genbank exon 1 2304 . + . ID=exon-C9F09_03360-1;Parent=rna-C9F09_03360;gbkey=rRNA;locus_tag=C9F09_03360;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region PYKB01001668.1 1 2310 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001668.1 Genbank region 1 2310 . + . ID=PYKB01001668.1:1..2310;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001668.1 Genbank gene 71 262 . + . ID=gene-C9F09_29020;Name=C9F09_29020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29020 PYKB01001668.1 Protein Homology CDS 71 262 . + 0 ID=cds-TGC73111.1;Parent=gene-C9F09_29020;Dbxref=NCBI_GP:TGC73111.1;Name=TGC73111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006684430.1;locus_tag=C9F09_29020;product=type I addiction module toxin%2C SymE family;protein_id=TGC73111.1;transl_table=11 PYKB01001668.1 Genbank gene 301 801 . - . ID=gene-C9F09_29025;Name=C9F09_29025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29025 PYKB01001668.1 Protein Homology CDS 301 801 . - 0 ID=cds-TGC73109.1;Parent=gene-C9F09_29025;Dbxref=NCBI_GP:TGC73109.1;Name=TGC73109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232789.1;locus_tag=C9F09_29025;product=hypothetical protein;protein_id=TGC73109.1;transl_table=11 PYKB01001668.1 Genbank gene 1394 1840 . - . ID=gene-C9F09_29030;Name=C9F09_29030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29030 PYKB01001668.1 Protein Homology CDS 1394 1840 . - 0 ID=cds-TGC73110.1;Parent=gene-C9F09_29030;Dbxref=NCBI_GP:TGC73110.1;Name=TGC73110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171103.1;locus_tag=C9F09_29030;product=type IV secretion protein Rhs;protein_id=TGC73110.1;transl_table=11 PYKB01001668.1 Genbank gene 1837 2310 . - . ID=gene-C9F09_29035;Name=C9F09_29035;end_range=2310,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29035;partial=true PYKB01001668.1 Protein Homology CDS 1837 2310 . - 0 ID=cds-TGC73112.1;Parent=gene-C9F09_29035;Dbxref=NCBI_GP:TGC73112.1;Name=TGC73112.1;end_range=2310,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001707735.1;locus_tag=C9F09_29035;partial=true;product=hypothetical protein;protein_id=TGC73112.1;transl_table=11 ##sequence-region PYKB01001141.1 1 2310 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001141.1 Genbank region 1 2310 . + . ID=PYKB01001141.1:1..2310;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001141.1 Genbank gene 1 166 . - . ID=gene-C9F09_19300;Name=C9F09_19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19300;partial=true;start_range=.,1 PYKB01001141.1 Protein Homology CDS 1 166 . - 0 ID=cds-TGC84878.1;Parent=gene-C9F09_19300;Dbxref=NCBI_GP:TGC84878.1;Name=TGC84878.1;Note=catalyzes the decarboxylation of oxaloacetate to form pyruvate and carbon dioxide;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454667.1;locus_tag=C9F09_19300;partial=true;product=oxaloacetate decarboxylase subunit gamma;protein_id=TGC84878.1;start_range=.,1;transl_table=11 PYKB01001141.1 Genbank gene 325 1665 . - . ID=gene-C9F09_19305;Name=citN;gbkey=Gene;gene=citN;gene_biotype=protein_coding;locus_tag=C9F09_19305 PYKB01001141.1 Protein Homology CDS 325 1665 . - 0 ID=cds-TGC84879.1;Parent=gene-C9F09_19305;Dbxref=NCBI_GP:TGC84879.1;Name=TGC84879.1;gbkey=CDS;gene=citN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454668.1;locus_tag=C9F09_19305;product=citrate/sodium symporter CitN;protein_id=TGC84879.1;transl_table=11 PYKB01001141.1 Genbank gene 1910 2310 . + . ID=gene-C9F09_19310;Name=C9F09_19310;end_range=2310,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19310;partial=true PYKB01001141.1 Protein Homology CDS 1910 2310 . + 0 ID=cds-TGC84880.1;Parent=gene-C9F09_19310;Dbxref=NCBI_GP:TGC84880.1;Name=TGC84880.1;end_range=2310,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454669.1;locus_tag=C9F09_19310;partial=true;product=[citrate (pro-3S)-lyase] ligase;protein_id=TGC84880.1;transl_table=11 ##sequence-region PYKB01000547.1 1 2308 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000547.1 Genbank region 1 2308 . + . ID=PYKB01000547.1:1..2308;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000547.1 Genbank gene 1 369 . + . ID=gene-C9F09_07525;Name=C9F09_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07525;partial=true;start_range=.,1 PYKB01000547.1 Protein Homology CDS 1 369 . + 0 ID=cds-TGC96570.1;Parent=gene-C9F09_07525;Dbxref=NCBI_GP:TGC96570.1;Name=TGC96570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=C9F09_07525;partial=true;product=molecular chaperone;protein_id=TGC96570.1;start_range=.,1;transl_table=11 PYKB01000547.1 Genbank gene 362 2308 . + . ID=gene-C9F09_07530;Name=C9F09_07530;end_range=2308,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07530;partial=true PYKB01000547.1 Protein Homology CDS 362 2308 . + 0 ID=cds-TGC96571.1;Parent=gene-C9F09_07530;Dbxref=NCBI_GP:TGC96571.1;Name=TGC96571.1;end_range=2308,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=C9F09_07530;partial=true;product=DMSO reductase;protein_id=TGC96571.1;transl_table=11 ##sequence-region PYKB01001129.1 1 2301 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001129.1 Genbank region 1 2301 . + . ID=PYKB01001129.1:1..2301;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001129.1 Genbank gene 1 387 . + . ID=gene-C9F09_19005;Name=C9F09_19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19005;partial=true;start_range=.,1 PYKB01001129.1 Protein Homology CDS 1 387 . + 0 ID=cds-TGC85258.1;Parent=gene-C9F09_19005;Dbxref=NCBI_GP:TGC85258.1;Name=TGC85258.1;Note=catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454680.1;locus_tag=C9F09_19005;partial=true;product=carnitinyl-CoA dehydratase;protein_id=TGC85258.1;start_range=.,1;transl_table=11 PYKB01001129.1 Genbank gene 497 1093 . + . ID=gene-C9F09_19010;Name=C9F09_19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19010 PYKB01001129.1 Protein Homology CDS 497 1093 . + 0 ID=cds-TGC85259.1;Parent=gene-C9F09_19010;Dbxref=NCBI_GP:TGC85259.1;Name=TGC85259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454679.1;locus_tag=C9F09_19010;product=carnitine operon protein CaiE;protein_id=TGC85259.1;transl_table=11 PYKB01001129.1 Genbank gene 1171 1566 . - . ID=gene-C9F09_19015;Name=C9F09_19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19015 PYKB01001129.1 Protein Homology CDS 1171 1566 . - 0 ID=cds-TGC85260.1;Parent=gene-C9F09_19015;Dbxref=NCBI_GP:TGC85260.1;Name=TGC85260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454678.1;locus_tag=C9F09_19015;product=transcriptional activator CaiF;protein_id=TGC85260.1;transl_table=11 PYKB01001129.1 Genbank gene 1840 2301 . - . ID=gene-C9F09_19020;Name=carB;end_range=2301,.;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=C9F09_19020;partial=true PYKB01001129.1 Protein Homology CDS 1840 2301 . - 0 ID=cds-TGC85261.1;Parent=gene-C9F09_19020;Dbxref=NCBI_GP:TGC85261.1;Name=TGC85261.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;end_range=2301,.;gbkey=CDS;gene=carB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454677.1;locus_tag=C9F09_19020;partial=true;product=carbamoyl phosphate synthase large subunit;protein_id=TGC85261.1;transl_table=11 ##sequence-region PYKB01000656.1 1 2298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000656.1 Genbank region 1 2298 . + . ID=PYKB01000656.1:1..2298;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000656.1 Genbank gene 9 323 . + . ID=gene-C9F09_09865;Name=C9F09_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09865 PYKB01000656.1 Protein Homology CDS 9 323 . + 0 ID=cds-TGC94298.1;Parent=gene-C9F09_09865;Dbxref=NCBI_GP:TGC94298.1;Name=TGC94298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457229.1;locus_tag=C9F09_09865;product=transcriptional regulator GutM;protein_id=TGC94298.1;transl_table=11 PYKB01000656.1 Genbank pseudogene 521 1294 . + . ID=gene-C9F09_09870;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=pseudogene;gene_synonym=gutR;locus_tag=C9F09_09870;pseudo=true PYKB01000656.1 Protein Homology CDS 521 1294 . + 0 ID=cds-C9F09_09870;Parent=gene-C9F09_09870;Note=regulates genes involved in glucitol utilization%3B internal stop;gbkey=CDS;gene=srlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457231.1;locus_tag=C9F09_09870;product=transcriptional regulator;pseudo=true;transl_table=11 PYKB01000656.1 Genbank gene 1287 2252 . + . ID=gene-C9F09_09875;Name=C9F09_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09875 PYKB01000656.1 Protein Homology CDS 1287 2252 . + 0 ID=cds-TGC94299.1;Parent=gene-C9F09_09875;Dbxref=NCBI_GP:TGC94299.1;Name=TGC94299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457232.1;locus_tag=C9F09_09875;product=arabinose-5-phosphate isomerase GutQ;protein_id=TGC94299.1;transl_table=11 ##sequence-region PYKB01001085.1 1 2297 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001085.1 Genbank region 1 2297 . + . ID=PYKB01001085.1:1..2297;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001085.1 Genbank gene 1 361 . + . ID=gene-C9F09_18150;Name=C9F09_18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18150;partial=true;start_range=.,1 PYKB01001085.1 Protein Homology CDS 1 361 . + 1 ID=cds-TGC86325.1;Parent=gene-C9F09_18150;Dbxref=NCBI_GP:TGC86325.1;Name=TGC86325.1;Note=catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454714.1;locus_tag=C9F09_18150;partial=true;product=L-arabinose isomerase;protein_id=TGC86325.1;start_range=.,1;transl_table=11 PYKB01001085.1 Genbank gene 502 1197 . + . ID=gene-C9F09_18155;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=C9F09_18155 PYKB01001085.1 Protein Homology CDS 502 1197 . + 0 ID=cds-TGC86326.1;Parent=gene-C9F09_18155;Dbxref=NCBI_GP:TGC86326.1;Name=TGC86326.1;gbkey=CDS;gene=araD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124519.1;locus_tag=C9F09_18155;product=L-ribulose-5-phosphate 4-epimerase;protein_id=TGC86326.1;transl_table=11 PYKB01001085.1 Genbank gene 1203 1622 . - . ID=gene-C9F09_18160;Name=C9F09_18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18160 PYKB01001085.1 Protein Homology CDS 1203 1622 . - 0 ID=cds-TGC86327.1;Parent=gene-C9F09_18160;Dbxref=NCBI_GP:TGC86327.1;Name=TGC86327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=C9F09_18160;product=DUF4751 domain-containing protein;protein_id=TGC86327.1;transl_table=11 PYKB01001085.1 Genbank pseudogene 1837 2052 . - . ID=gene-C9F09_18165;Name=C9F09_18165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18165;pseudo=true PYKB01001085.1 Protein Homology CDS 1837 2052 . - 0 ID=cds-C9F09_18165;Parent=gene-C9F09_18165;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446563.1;locus_tag=C9F09_18165;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001085.1 Genbank gene 2140 2297 . + . ID=gene-C9F09_18170;Name=C9F09_18170;end_range=2297,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18170;partial=true PYKB01001085.1 Protein Homology CDS 2140 2297 . + 0 ID=cds-TGC86328.1;Parent=gene-C9F09_18170;Dbxref=NCBI_GP:TGC86328.1;Name=TGC86328.1;end_range=2297,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=C9F09_18170;partial=true;product=multidrug MFS transporter;protein_id=TGC86328.1;transl_table=11 ##sequence-region PYKB01000515.1 1 9019 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000515.1 Genbank region 1 9019 . + . ID=PYKB01000515.1:1..9019;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000515.1 Genbank gene 1 663 . - . ID=gene-C9F09_06865;Name=C9F09_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06865;partial=true;start_range=.,1 PYKB01000515.1 Protein Homology CDS 1 663 . - 0 ID=cds-TGC97211.1;Parent=gene-C9F09_06865;Dbxref=NCBI_GP:TGC97211.1;Name=TGC97211.1;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458989.1;locus_tag=C9F09_06865;partial=true;product=energy-dependent translational throttle protein EttA;protein_id=TGC97211.1;start_range=.,1;transl_table=11 PYKB01000515.1 Genbank pseudogene 637 768 . + . ID=gene-C9F09_06870;Name=C9F09_06870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_06870;pseudo=true PYKB01000515.1 Protein Homology CDS 637 768 . + 0 ID=cds-C9F09_06870;Parent=gene-C9F09_06870;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328668.1;locus_tag=C9F09_06870;product=methionine aminopeptidase;pseudo=true;transl_table=11 PYKB01000515.1 Genbank gene 836 2809 . + . ID=gene-C9F09_06875;Name=C9F09_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06875 PYKB01000515.1 Protein Homology CDS 836 2809 . + 0 ID=cds-TGC97201.1;Parent=gene-C9F09_06875;Dbxref=NCBI_GP:TGC97201.1;Name=TGC97201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463438.3;locus_tag=C9F09_06875;product=murein transglycosylase;protein_id=TGC97201.1;transl_table=11 PYKB01000515.1 Genbank gene 2867 3193 . + . ID=gene-C9F09_06880;Name=C9F09_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06880 PYKB01000515.1 Protein Homology CDS 2867 3193 . + 0 ID=cds-TGC97202.1;Parent=gene-C9F09_06880;Dbxref=NCBI_GP:TGC97202.1;Name=TGC97202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=C9F09_06880;product=trp operon repressor;protein_id=TGC97202.1;transl_table=11 PYKB01000515.1 Genbank gene 3111 3290 . - . ID=gene-C9F09_06885;Name=C9F09_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06885 PYKB01000515.1 Protein Homology CDS 3111 3290 . - 0 ID=cds-TGC97203.1;Parent=gene-C9F09_06885;Dbxref=NCBI_GP:TGC97203.1;Name=TGC97203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341252.1;locus_tag=C9F09_06885;product=hypothetical protein;protein_id=TGC97203.1;transl_table=11 PYKB01000515.1 Genbank gene 3295 3810 . - . ID=gene-C9F09_06890;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=C9F09_06890 PYKB01000515.1 Protein Homology CDS 3295 3810 . - 0 ID=cds-TGC97204.1;Parent=gene-C9F09_06890;Dbxref=NCBI_GP:TGC97204.1;Name=TGC97204.1;Note=pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=C9F09_06890;product=non-canonical purine NTP phosphatase;protein_id=TGC97204.1;transl_table=11 PYKB01000515.1 Genbank gene 3859 4506 . + . ID=gene-C9F09_06895;Name=C9F09_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06895 PYKB01000515.1 Protein Homology CDS 3859 4506 . + 0 ID=cds-TGC97205.1;Parent=gene-C9F09_06895;Dbxref=NCBI_GP:TGC97205.1;Name=TGC97205.1;Note=catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=C9F09_06895;product=phosphoglycerate mutase GpmB;protein_id=TGC97205.1;transl_table=11 PYKB01000515.1 Genbank gene 4503 5372 . - . ID=gene-C9F09_06900;Name=C9F09_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06900 PYKB01000515.1 Protein Homology CDS 4503 5372 . - 0 ID=cds-TGC97206.1;Parent=gene-C9F09_06900;Dbxref=NCBI_GP:TGC97206.1;Name=TGC97206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=C9F09_06900;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=TGC97206.1;transl_table=11 PYKB01000515.1 Genbank gene 5584 6057 . + . ID=gene-C9F09_06905;Name=C9F09_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06905 PYKB01000515.1 Protein Homology CDS 5584 6057 . + 0 ID=cds-TGC97207.1;Parent=gene-C9F09_06905;Dbxref=NCBI_GP:TGC97207.1;Name=TGC97207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458994.1;locus_tag=C9F09_06905;product=hypothetical protein;protein_id=TGC97207.1;transl_table=11 PYKB01000515.1 Genbank gene 6070 6759 . + . ID=gene-C9F09_06910;Name=C9F09_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06910 PYKB01000515.1 Protein Homology CDS 6070 6759 . + 0 ID=cds-TGC97208.1;Parent=gene-C9F09_06910;Dbxref=NCBI_GP:TGC97208.1;Name=TGC97208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=C9F09_06910;product=two-component system response regulator CreB;protein_id=TGC97208.1;transl_table=11 PYKB01000515.1 Genbank gene 6759 8183 . + . ID=gene-C9F09_06915;Name=C9F09_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06915 PYKB01000515.1 Protein Homology CDS 6759 8183 . + 0 ID=cds-TGC97209.1;Parent=gene-C9F09_06915;Dbxref=NCBI_GP:TGC97209.1;Name=TGC97209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458996.1;locus_tag=C9F09_06915;product=two-component system sensor histidine kinase CreC;protein_id=TGC97209.1;transl_table=11 PYKB01000515.1 Genbank gene 8241 9019 . + . ID=gene-C9F09_06920;Name=C9F09_06920;end_range=9019,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06920;partial=true PYKB01000515.1 Protein Homology CDS 8241 9019 . + 0 ID=cds-TGC97210.1;Parent=gene-C9F09_06920;Dbxref=NCBI_GP:TGC97210.1;Name=TGC97210.1;end_range=9019,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458997.1;locus_tag=C9F09_06920;partial=true;product=cell envelope integrity protein CreD;protein_id=TGC97210.1;transl_table=11 ##sequence-region PYKB01001233.1 1 2292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001233.1 Genbank region 1 2292 . + . ID=PYKB01001233.1:1..2292;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001233.1 Genbank pseudogene 1 151 . + . ID=gene-C9F09_20915;Name=C9F09_20915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_20915;pseudo=true PYKB01001233.1 Protein Homology CDS 1 151 . + 1 ID=cds-C9F09_20915;Parent=gene-C9F09_20915;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663292.1;locus_tag=C9F09_20915;product=thiol:disulfide interchange protein;pseudo=true;transl_table=11 PYKB01001233.1 Genbank gene 194 778 . + . ID=gene-C9F09_20920;Name=C9F09_20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20920 PYKB01001233.1 Protein Homology CDS 194 778 . + 0 ID=cds-TGC82823.1;Parent=gene-C9F09_20920;Dbxref=NCBI_GP:TGC82823.1;Name=TGC82823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576642.1;locus_tag=C9F09_20920;product=hypothetical protein;protein_id=TGC82823.1;transl_table=11 PYKB01001233.1 Genbank gene 851 1063 . + . ID=gene-C9F09_20925;Name=C9F09_20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20925 PYKB01001233.1 Protein Homology CDS 851 1063 . + 0 ID=cds-TGC82824.1;Parent=gene-C9F09_20925;Dbxref=NCBI_GP:TGC82824.1;Name=TGC82824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063796.1;locus_tag=C9F09_20925;product=faeA-like family protein;protein_id=TGC82824.1;transl_table=11 PYKB01001233.1 Genbank gene 1512 2292 . + . ID=gene-C9F09_20930;Name=C9F09_20930;end_range=2292,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20930;partial=true PYKB01001233.1 Protein Homology CDS 1512 2292 . + 0 ID=cds-TGC82825.1;Parent=gene-C9F09_20930;Dbxref=NCBI_GP:TGC82825.1;Name=TGC82825.1;end_range=2292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175395.1;locus_tag=C9F09_20930;partial=true;product=hypothetical protein;protein_id=TGC82825.1;transl_table=11 ##sequence-region PYKB01001244.1 1 2285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001244.1 Genbank region 1 2285 . + . ID=PYKB01001244.1:1..2285;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001244.1 Genbank gene 1 1391 . + . ID=gene-C9F09_21220;Name=vasA;gbkey=Gene;gene=vasA;gene_biotype=protein_coding;locus_tag=C9F09_21220;partial=true;start_range=.,1 PYKB01001244.1 Protein Homology CDS 1 1391 . + 2 ID=cds-TGC82578.1;Parent=gene-C9F09_21220;Dbxref=NCBI_GP:TGC82578.1;Name=TGC82578.1;gbkey=CDS;gene=vasA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=C9F09_21220;partial=true;product=type VI secretion system baseplate subunit TssF;protein_id=TGC82578.1;start_range=.,1;transl_table=11 PYKB01001244.1 Genbank pseudogene 1388 2285 . + . ID=gene-C9F09_21225;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=pseudogene;locus_tag=C9F09_21225;pseudo=true PYKB01001244.1 Protein Homology CDS 1388 2285 . + 0 ID=cds-C9F09_21225;Parent=gene-C9F09_21225;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;gene=tssG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459264.1;locus_tag=C9F09_21225;product=type VI secretion system baseplate subunit TssG;pseudo=true;transl_table=11 ##sequence-region PYKB01000606.1 1 2284 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000606.1 Genbank region 1 2284 . + . ID=PYKB01000606.1:1..2284;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000606.1 Genbank gene 1 549 . - . ID=gene-C9F09_08920;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=C9F09_08920;partial=true;start_range=.,1 PYKB01000606.1 Protein Homology CDS 1 549 . - 0 ID=cds-TGC95214.1;Parent=gene-C9F09_08920;Dbxref=NCBI_GP:TGC95214.1;Name=TGC95214.1;gbkey=CDS;gene=rarD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457796.1;locus_tag=C9F09_08920;partial=true;product=EamA family transporter RarD;protein_id=TGC95214.1;start_range=.,1;transl_table=11 PYKB01000606.1 Genbank gene 593 1060 . - . ID=gene-C9F09_08925;Name=C9F09_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08925 PYKB01000606.1 Protein Homology CDS 593 1060 . - 0 ID=cds-TGC95215.1;Parent=gene-C9F09_08925;Dbxref=NCBI_GP:TGC95215.1;Name=TGC95215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457795.1;locus_tag=C9F09_08925;product=thioesterase family protein;protein_id=TGC95215.1;transl_table=11 PYKB01000606.1 Genbank gene 1225 2094 . + . ID=gene-C9F09_08930;Name=C9F09_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08930 PYKB01000606.1 Protein Homology CDS 1225 2094 . + 0 ID=cds-TGC95216.1;Parent=gene-C9F09_08930;Dbxref=NCBI_GP:TGC95216.1;Name=TGC95216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457794.1;locus_tag=C9F09_08930;product=phospholipase A(1);protein_id=TGC95216.1;transl_table=11 PYKB01000606.1 Genbank gene 2178 2284 . + . ID=gene-C9F09_08935;Name=C9F09_08935;end_range=2284,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08935;partial=true PYKB01000606.1 Protein Homology CDS 2178 2284 . + 0 ID=cds-TGC95217.1;Parent=gene-C9F09_08935;Dbxref=NCBI_GP:TGC95217.1;Name=TGC95217.1;end_range=2284,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457793.3;locus_tag=C9F09_08935;partial=true;product=DEAD/DEAH box helicase;protein_id=TGC95217.1;transl_table=11 ##sequence-region PYKB01001148.1 1 2283 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001148.1 Genbank region 1 2283 . + . ID=PYKB01001148.1:1..2283;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001148.1 Genbank gene 63 443 . + . ID=gene-C9F09_19395;Name=C9F09_19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19395 PYKB01001148.1 Protein Homology CDS 63 443 . + 0 ID=cds-TGC84760.1;Parent=gene-C9F09_19395;Dbxref=NCBI_GP:TGC84760.1;Name=TGC84760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001657563.1;locus_tag=C9F09_19395;product=DUF2531 domain-containing protein;protein_id=TGC84760.1;transl_table=11 PYKB01001148.1 Genbank gene 358 1596 . + . ID=gene-C9F09_19400;Name=C9F09_19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19400 PYKB01001148.1 Protein Homology CDS 358 1596 . + 0 ID=cds-TGC84758.1;Parent=gene-C9F09_19400;Dbxref=NCBI_GP:TGC84758.1;Name=TGC84758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458416.1;locus_tag=C9F09_19400;product=DNA transporter HofQ;protein_id=TGC84758.1;transl_table=11 PYKB01001148.1 Genbank gene 1852 2034 . + . ID=gene-C9F09_19405;Name=C9F09_19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19405 PYKB01001148.1 Protein Homology CDS 1852 2034 . + 0 ID=cds-TGC84761.1;Parent=gene-C9F09_19405;Dbxref=NCBI_GP:TGC84761.1;Name=TGC84761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751150.1;locus_tag=C9F09_19405;product=hypothetical protein;protein_id=TGC84761.1;transl_table=11 PYKB01001148.1 Genbank gene 2061 2283 . + . ID=gene-C9F09_19410;Name=C9F09_19410;end_range=2283,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19410;partial=true PYKB01001148.1 Protein Homology CDS 2061 2283 . + 0 ID=cds-TGC84759.1;Parent=gene-C9F09_19410;Dbxref=NCBI_GP:TGC84759.1;Name=TGC84759.1;end_range=2283,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458417.1;locus_tag=C9F09_19410;partial=true;product=hypothetical protein;protein_id=TGC84759.1;transl_table=11 ##sequence-region PYKB01000369.1 1 2282 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000369.1 Genbank region 1 2282 . + . ID=PYKB01000369.1:1..2282;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000369.1 Genbank gene 1 419 . - . ID=gene-C9F09_04180;Name=C9F09_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04180;partial=true;start_range=.,1 PYKB01000369.1 Protein Homology CDS 1 419 . - 0 ID=cds-TGD00128.1;Parent=gene-C9F09_04180;Dbxref=NCBI_GP:TGD00128.1;Name=TGD00128.1;Note=cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312235.1;locus_tag=C9F09_04180;partial=true;product=cAMP-activated global transcriptional regulator CRP;protein_id=TGD00128.1;start_range=.,1;transl_table=11 PYKB01000369.1 Genbank gene 727 1131 . + . ID=gene-C9F09_04185;Name=C9F09_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04185 PYKB01000369.1 Protein Homology CDS 727 1131 . + 0 ID=cds-TGD00129.1;Parent=gene-C9F09_04185;Dbxref=NCBI_GP:TGD00129.1;Name=TGD00129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=C9F09_04185;product=OsmC family protein;protein_id=TGD00129.1;transl_table=11 PYKB01000369.1 Genbank pseudogene 1230 2096 . - . ID=gene-C9F09_04190;Name=C9F09_04190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04190;pseudo=true PYKB01000369.1 Protein Homology CDS 1230 2096 . - 0 ID=cds-C9F09_04190;Parent=gene-C9F09_04190;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458437.1;locus_tag=C9F09_04190;product=phosphoribulokinase;pseudo=true;transl_table=11 PYKB01000369.1 Genbank gene 2148 2282 . - . ID=gene-C9F09_04195;Name=C9F09_04195;end_range=2282,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04195;partial=true PYKB01000369.1 Protein Homology CDS 2148 2282 . - 0 ID=cds-TGD00130.1;Parent=gene-C9F09_04195;Dbxref=NCBI_GP:TGD00130.1;Name=TGD00130.1;end_range=2282,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458438.1;locus_tag=C9F09_04195;partial=true;product=hypothetical protein;protein_id=TGD00130.1;transl_table=11 ##sequence-region PYKB01000483.1 1 2282 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000483.1 Genbank region 1 2282 . + . ID=PYKB01000483.1:1..2282;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000483.1 Genbank pseudogene 68 1822 . - . ID=gene-C9F09_06060;Name=C9F09_06060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_06060;pseudo=true PYKB01000483.1 Protein Homology CDS 68 1822 . - 0 ID=cds-C9F09_06060;Parent=gene-C9F09_06060;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459446.1;locus_tag=C9F09_06060;product=endopeptidase La;pseudo=true;transl_table=11 PYKB01000483.1 Genbank gene 2008 2282 . - . ID=gene-C9F09_06065;Name=clpX;end_range=2282,.;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=C9F09_06065;partial=true PYKB01000483.1 Protein Homology CDS 2008 2282 . - 2 ID=cds-TGC97984.1;Parent=gene-C9F09_06065;Dbxref=NCBI_GP:TGC97984.1;Name=TGC97984.1;Note=binds and unfolds substrates as part of the ClpXP protease;end_range=2282,.;gbkey=CDS;gene=clpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000130313.1;locus_tag=C9F09_06065;partial=true;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=TGC97984.1;transl_table=11 ##sequence-region PYKB01000717.1 1 2281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000717.1 Genbank region 1 2281 . + . ID=PYKB01000717.1:1..2281;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000717.1 Genbank gene 1 166 . - . ID=gene-C9F09_10970;Name=C9F09_10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10970;partial=true;start_range=.,1 PYKB01000717.1 Protein Homology CDS 1 166 . - 0 ID=cds-TGC93467.1;Parent=gene-C9F09_10970;Dbxref=NCBI_GP:TGC93467.1;Name=TGC93467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457170.1;locus_tag=C9F09_10970;partial=true;product=phage tail protein;protein_id=TGC93467.1;start_range=.,1;transl_table=11 PYKB01000717.1 Genbank gene 176 1348 . - . ID=gene-C9F09_10975;Name=C9F09_10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10975 PYKB01000717.1 Protein Homology CDS 176 1348 . - 0 ID=cds-TGC93468.1;Parent=gene-C9F09_10975;Dbxref=NCBI_GP:TGC93468.1;Name=TGC93468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461629.1;locus_tag=C9F09_10975;product=phage tail protein;protein_id=TGC93468.1;transl_table=11 PYKB01000717.1 Genbank gene 1479 2006 . - . ID=gene-C9F09_10980;Name=C9F09_10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10980 PYKB01000717.1 Protein Homology CDS 1479 2006 . - 0 ID=cds-TGC93469.1;Parent=gene-C9F09_10980;Dbxref=NCBI_GP:TGC93469.1;Name=TGC93469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461177.1;locus_tag=C9F09_10980;product=phage tail protein;protein_id=TGC93469.1;transl_table=11 PYKB01000717.1 Genbank gene 2009 2281 . - . ID=gene-C9F09_10985;Name=C9F09_10985;end_range=2281,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10985;partial=true PYKB01000717.1 Protein Homology CDS 2009 2281 . - 0 ID=cds-TGC93470.1;Parent=gene-C9F09_10985;Dbxref=NCBI_GP:TGC93470.1;Name=TGC93470.1;end_range=2281,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461178.1;locus_tag=C9F09_10985;partial=true;product=phage tail protein;protein_id=TGC93470.1;transl_table=11 ##sequence-region PYKB01001377.1 1 2279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001377.1 Genbank region 1 2279 . + . ID=PYKB01001377.1:1..2279;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001377.1 Genbank pseudogene 1 126 . + . ID=gene-C9F09_23725;Name=C9F09_23725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23725;pseudo=true PYKB01001377.1 Protein Homology CDS 1 126 . + 0 ID=cds-C9F09_23725;Parent=gene-C9F09_23725;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176636.1;locus_tag=C9F09_23725;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 PYKB01001377.1 Genbank gene 275 1741 . - . ID=gene-C9F09_23730;Name=C9F09_23730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23730 PYKB01001377.1 Protein Homology CDS 275 1741 . - 0 ID=cds-TGC79962.1;Parent=gene-C9F09_23730;Dbxref=NCBI_GP:TGC79962.1;Name=TGC79962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460513.1;locus_tag=C9F09_23730;product=hypothetical protein;protein_id=TGC79962.1;transl_table=11 PYKB01001377.1 Genbank gene 1999 2279 . + . ID=gene-C9F09_23735;Name=C9F09_23735;end_range=2279,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23735;partial=true PYKB01001377.1 Protein Homology CDS 1999 2279 . + 0 ID=cds-TGC79963.1;Parent=gene-C9F09_23735;Dbxref=NCBI_GP:TGC79963.1;Name=TGC79963.1;end_range=2279,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=C9F09_23735;partial=true;product=transcriptional regulator;protein_id=TGC79963.1;transl_table=11 ##sequence-region PYKB01001539.1 1 2277 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001539.1 Genbank region 1 2277 . + . ID=PYKB01001539.1:1..2277;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001539.1 Genbank gene 1 1634 . + . ID=gene-C9F09_26825;Name=C9F09_26825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26825;partial=true;start_range=.,1 PYKB01001539.1 Protein Homology CDS 1 1634 . + 2 ID=cds-TGC76263.1;Parent=gene-C9F09_26825;Dbxref=NCBI_GP:TGC76263.1;Name=TGC76263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748831.1;locus_tag=C9F09_26825;partial=true;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=TGC76263.1;start_range=.,1;transl_table=11 PYKB01001539.1 Genbank gene 1767 2277 . - . ID=gene-C9F09_26830;Name=C9F09_26830;end_range=2277,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26830;partial=true PYKB01001539.1 Protein Homology CDS 1767 2277 . - 1 ID=cds-TGC76264.1;Parent=gene-C9F09_26830;Dbxref=NCBI_GP:TGC76264.1;Name=TGC76264.1;end_range=2277,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463399.3;locus_tag=C9F09_26830;partial=true;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=TGC76264.1;transl_table=11 ##sequence-region PYKB01000972.1 1 2259 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000972.1 Genbank region 1 2259 . + . ID=PYKB01000972.1:1..2259;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000972.1 Genbank pseudogene 1 701 . - . ID=gene-C9F09_16075;Name=C9F09_16075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16075;pseudo=true PYKB01000972.1 Protein Homology CDS 1 701 . - 0 ID=cds-C9F09_16075;Parent=gene-C9F09_16075;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=C9F09_16075;product=NAD(P)-dependent dehydrogenase;pseudo=true;transl_table=11 PYKB01000972.1 Genbank gene 825 1229 . - . ID=gene-C9F09_16080;Name=C9F09_16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16080 PYKB01000972.1 Protein Homology CDS 825 1229 . - 0 ID=cds-TGC88857.1;Parent=gene-C9F09_16080;Dbxref=NCBI_GP:TGC88857.1;Name=TGC88857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=C9F09_16080;product=cytoplasmic protein;protein_id=TGC88857.1;transl_table=11 PYKB01000972.1 Genbank gene 1216 1626 . - . ID=gene-C9F09_16085;Name=C9F09_16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16085 PYKB01000972.1 Protein Homology CDS 1216 1626 . - 0 ID=cds-TGC88858.1;Parent=gene-C9F09_16085;Dbxref=NCBI_GP:TGC88858.1;Name=TGC88858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=C9F09_16085;product=hypothetical protein;protein_id=TGC88858.1;transl_table=11 PYKB01000972.1 Genbank gene 1718 2248 . + . ID=gene-C9F09_16090;Name=C9F09_16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16090 PYKB01000972.1 Protein Homology CDS 1718 2248 . + 0 ID=cds-TGC88859.1;Parent=gene-C9F09_16090;Dbxref=NCBI_GP:TGC88859.1;Name=TGC88859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462069.1;locus_tag=C9F09_16090;product=RNA helicase;protein_id=TGC88859.1;transl_table=11 ##sequence-region PYKB01001534.1 1 9010 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001534.1 Genbank region 1 9010 . + . ID=PYKB01001534.1:1..9010;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001534.1 Genbank pseudogene 69 329 . + . ID=gene-C9F09_26665;Name=C9F09_26665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_26665;pseudo=true PYKB01001534.1 Protein Homology CDS 69 329 . + 0 ID=cds-C9F09_26665;Parent=gene-C9F09_26665;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=C9F09_26665;product=quinolinate synthase;pseudo=true;transl_table=11 PYKB01001534.1 Genbank gene 354 1073 . + . ID=gene-C9F09_26670;Name=C9F09_26670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26670 PYKB01001534.1 Protein Homology CDS 354 1073 . + 0 ID=cds-TGC76399.1;Parent=gene-C9F09_26670;Dbxref=NCBI_GP:TGC76399.1;Name=TGC76399.1;Note=involved in nicotinamide riboside transport;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455308.1;locus_tag=C9F09_26670;product=nicotinamide riboside transporter PnuC;protein_id=TGC76399.1;transl_table=11 PYKB01001534.1 Genbank gene 1070 2008 . - . ID=gene-C9F09_26675;Name=C9F09_26675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26675 PYKB01001534.1 Protein Homology CDS 1070 2008 . - 0 ID=cds-TGC76400.1;Parent=gene-C9F09_26675;Dbxref=NCBI_GP:TGC76400.1;Name=TGC76400.1;Note=involved in zinc efflux across the cytoplasmic membrane;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=C9F09_26675;product=cation transporter;protein_id=TGC76400.1;transl_table=11 PYKB01001534.1 Genbank gene 2119 2505 . - . ID=gene-C9F09_26680;Name=C9F09_26680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26680 PYKB01001534.1 Protein Homology CDS 2119 2505 . - 0 ID=cds-TGC76401.1;Parent=gene-C9F09_26680;Dbxref=NCBI_GP:TGC76401.1;Name=TGC76401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455310.1;locus_tag=C9F09_26680;product=hypothetical protein;protein_id=TGC76401.1;transl_table=11 PYKB01001534.1 Genbank gene 2825 3877 . + . ID=gene-C9F09_26685;Name=C9F09_26685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26685 PYKB01001534.1 Protein Homology CDS 2825 3877 . + 0 ID=cds-TGC76402.1;Parent=gene-C9F09_26685;Dbxref=NCBI_GP:TGC76402.1;Name=TGC76402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=C9F09_26685;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=TGC76402.1;transl_table=11 PYKB01001534.1 Genbank gene 3971 4516 . - . ID=gene-C9F09_26690;Name=C9F09_26690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26690 PYKB01001534.1 Protein Homology CDS 3971 4516 . - 0 ID=cds-TGC76403.1;Parent=gene-C9F09_26690;Dbxref=NCBI_GP:TGC76403.1;Name=TGC76403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459741.1;locus_tag=C9F09_26690;product=fumarate hydratase subunit beta;protein_id=TGC76403.1;transl_table=11 PYKB01001534.1 Genbank gene 4531 5376 . - . ID=gene-C9F09_26695;Name=C9F09_26695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26695 PYKB01001534.1 Protein Homology CDS 4531 5376 . - 0 ID=cds-TGC76404.1;Parent=gene-C9F09_26695;Dbxref=NCBI_GP:TGC76404.1;Name=TGC76404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459742.1;locus_tag=C9F09_26695;product=fumarate hydratase;protein_id=TGC76404.1;transl_table=11 PYKB01001534.1 Genbank gene 5506 6396 . + . ID=gene-C9F09_26700;Name=C9F09_26700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26700 PYKB01001534.1 Protein Homology CDS 5506 6396 . + 0 ID=cds-TGC76405.1;Parent=gene-C9F09_26700;Dbxref=NCBI_GP:TGC76405.1;Name=TGC76405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539513.1;locus_tag=C9F09_26700;product=LysR family transcriptional regulator;protein_id=TGC76405.1;transl_table=11 PYKB01001534.1 Genbank gene 6397 7380 . - . ID=gene-C9F09_26705;Name=C9F09_26705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26705 PYKB01001534.1 Protein Homology CDS 6397 7380 . - 0 ID=cds-TGC76406.1;Parent=gene-C9F09_26705;Dbxref=NCBI_GP:TGC76406.1;Name=TGC76406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459744.1;locus_tag=C9F09_26705;product=LysR family transcriptional regulator;protein_id=TGC76406.1;transl_table=11 PYKB01001534.1 Genbank gene 7624 8871 . + . ID=gene-C9F09_26710;Name=C9F09_26710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26710 PYKB01001534.1 Protein Homology CDS 7624 8871 . + 0 ID=cds-TGC76407.1;Parent=gene-C9F09_26710;Dbxref=NCBI_GP:TGC76407.1;Name=TGC76407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459745.1;locus_tag=C9F09_26710;product=cation transporter;protein_id=TGC76407.1;transl_table=11 PYKB01001534.1 Genbank gene 8921 9010 . + . ID=gene-C9F09_26715;Name=C9F09_26715;end_range=9010,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26715;partial=true PYKB01001534.1 Protein Homology CDS 8921 9010 . + 0 ID=cds-TGC76408.1;Parent=gene-C9F09_26715;Dbxref=NCBI_GP:TGC76408.1;Name=TGC76408.1;Note=catalyzes the decarboxylation of oxaloacetate to form pyruvate and carbon dioxide;end_range=9010,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=C9F09_26715;partial=true;product=oxaloacetate decarboxylase subunit gamma;protein_id=TGC76408.1;transl_table=11 ##sequence-region PYKB01001419.1 1 2251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001419.1 Genbank region 1 2251 . + . ID=PYKB01001419.1:1..2251;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001419.1 Genbank gene 213 758 . - . ID=gene-C9F09_24405;Name=C9F09_24405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24405 PYKB01001419.1 Protein Homology CDS 213 758 . - 0 ID=cds-TGC79020.1;Parent=gene-C9F09_24405;Dbxref=NCBI_GP:TGC79020.1;Name=TGC79020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457765.1;locus_tag=C9F09_24405;product=protoporphyrinogen oxidase;protein_id=TGC79020.1;transl_table=11 PYKB01001419.1 Genbank gene 770 2161 . - . ID=gene-C9F09_24410;Name=C9F09_24410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24410 PYKB01001419.1 Protein Homology CDS 770 2161 . - 0 ID=cds-TGC79021.1;Parent=gene-C9F09_24410;Dbxref=NCBI_GP:TGC79021.1;Name=TGC79021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=C9F09_24410;product=Trk system potassium transporter TrkH;protein_id=TGC79021.1;transl_table=11 ##sequence-region PYKB01001123.1 1 2251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001123.1 Genbank region 1 2251 . + . ID=PYKB01001123.1:1..2251;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001123.1 Genbank gene 37 900 . + . ID=gene-C9F09_18875;Name=C9F09_18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18875 PYKB01001123.1 Protein Homology CDS 37 900 . + 0 ID=cds-TGC85406.1;Parent=gene-C9F09_18875;Dbxref=NCBI_GP:TGC85406.1;Name=TGC85406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455454.1;locus_tag=C9F09_18875;product=dimethyl sulfoxide reductase;protein_id=TGC85406.1;transl_table=11 PYKB01001123.1 Genbank gene 1250 2251 . + . ID=gene-C9F09_18880;Name=C9F09_18880;end_range=2251,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18880;partial=true PYKB01001123.1 Protein Homology CDS 1250 2251 . + 0 ID=cds-TGC85407.1;Parent=gene-C9F09_18880;Dbxref=NCBI_GP:TGC85407.1;Name=TGC85407.1;end_range=2251,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=C9F09_18880;partial=true;product=MFS transporter;protein_id=TGC85407.1;transl_table=11 ##sequence-region PYKB01001371.1 1 2250 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001371.1 Genbank region 1 2250 . + . ID=PYKB01001371.1:1..2250;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001371.1 Genbank gene 1 112 . - . ID=gene-C9F09_23580;Name=C9F09_23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23580;partial=true;start_range=.,1 PYKB01001371.1 Protein Homology CDS 1 112 . - 0 ID=cds-TGC80153.1;Parent=gene-C9F09_23580;Dbxref=NCBI_GP:TGC80153.1;Name=TGC80153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663253.1;locus_tag=C9F09_23580;partial=true;product=GNAT family N-acetyltransferase;protein_id=TGC80153.1;start_range=.,1;transl_table=11 PYKB01001371.1 Genbank gene 209 1138 . + . ID=gene-C9F09_23585;Name=C9F09_23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23585 PYKB01001371.1 Protein Homology CDS 209 1138 . + 0 ID=cds-TGC80154.1;Parent=gene-C9F09_23585;Dbxref=NCBI_GP:TGC80154.1;Name=TGC80154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=C9F09_23585;product=homoserine O-succinyltransferase;protein_id=TGC80154.1;transl_table=11 PYKB01001371.1 Genbank gene 1407 2250 . + . ID=gene-C9F09_23590;Name=C9F09_23590;end_range=2250,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23590;partial=true PYKB01001371.1 Protein Homology CDS 1407 2250 . + 0 ID=cds-TGC80155.1;Parent=gene-C9F09_23590;Dbxref=NCBI_GP:TGC80155.1;Name=TGC80155.1;end_range=2250,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458503.1;locus_tag=C9F09_23590;partial=true;product=malate synthase;protein_id=TGC80155.1;transl_table=11 ##sequence-region PYKB01000639.1 1 2242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000639.1 Genbank region 1 2242 . + . ID=PYKB01000639.1:1..2242;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000639.1 Genbank gene 1 578 . - . ID=gene-C9F09_09565;Name=C9F09_09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09565;partial=true;start_range=.,1 PYKB01000639.1 Protein Homology CDS 1 578 . - 0 ID=cds-TGC94573.1;Parent=gene-C9F09_09565;Dbxref=NCBI_GP:TGC94573.1;Name=TGC94573.1;Note=serine sensor receptor;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456485.1;locus_tag=C9F09_09565;partial=true;product=methyl-accepting chemotaxis protein II;protein_id=TGC94573.1;start_range=.,1;transl_table=11 PYKB01000639.1 Genbank gene 815 1318 . - . ID=gene-C9F09_09570;Name=C9F09_09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09570 PYKB01000639.1 Protein Homology CDS 815 1318 . - 0 ID=cds-TGC94574.1;Parent=gene-C9F09_09570;Dbxref=NCBI_GP:TGC94574.1;Name=TGC94574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=C9F09_09570;product=chemotaxis protein CheW;protein_id=TGC94574.1;transl_table=11 PYKB01000639.1 Genbank gene 1339 2242 . - . ID=gene-C9F09_09575;Name=C9F09_09575;end_range=2242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09575;partial=true PYKB01000639.1 Protein Homology CDS 1339 2242 . - 1 ID=cds-TGC94575.1;Parent=gene-C9F09_09575;Dbxref=NCBI_GP:TGC94575.1;Name=TGC94575.1;end_range=2242,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=C9F09_09575;partial=true;product=chemotaxis protein CheA;protein_id=TGC94575.1;transl_table=11 ##sequence-region PYKB01001277.1 1 2238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001277.1 Genbank region 1 2238 . + . ID=PYKB01001277.1:1..2238;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001277.1 Genbank pseudogene 77 514 . - . ID=gene-C9F09_21870;Name=C9F09_21870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21870;pseudo=true PYKB01001277.1 Protein Homology CDS 77 514 . - 0 ID=cds-C9F09_21870;Parent=gene-C9F09_21870;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=C9F09_21870;product=50S ribosomal protein L9;pseudo=true;transl_table=11 PYKB01001277.1 Genbank gene 556 783 . - . ID=gene-C9F09_21875;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=C9F09_21875 PYKB01001277.1 Protein Homology CDS 556 783 . - 0 ID=cds-TGC82022.1;Parent=gene-C9F09_21875;Dbxref=NCBI_GP:TGC82022.1;Name=TGC82022.1;gbkey=CDS;gene=rpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=C9F09_21875;product=30S ribosomal protein S18;protein_id=TGC82022.1;transl_table=11 PYKB01001277.1 Genbank gene 788 1102 . - . ID=gene-C9F09_21880;Name=C9F09_21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21880 PYKB01001277.1 Protein Homology CDS 788 1102 . - 0 ID=cds-TGC82023.1;Parent=gene-C9F09_21880;Dbxref=NCBI_GP:TGC82023.1;Name=TGC82023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001315977.1;locus_tag=C9F09_21880;product=primosomal replication protein N;protein_id=TGC82023.1;transl_table=11 PYKB01001277.1 Genbank gene 1109 1504 . - . ID=gene-C9F09_21885;Name=C9F09_21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21885 PYKB01001277.1 Protein Homology CDS 1109 1504 . - 0 ID=cds-TGC82024.1;Parent=gene-C9F09_21885;Dbxref=NCBI_GP:TGC82024.1;Name=TGC82024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=C9F09_21885;product=30S ribosomal protein S6;protein_id=TGC82024.1;transl_table=11 PYKB01001277.1 Genbank gene 1891 2166 . + . ID=gene-C9F09_21890;Name=C9F09_21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21890 PYKB01001277.1 Protein Homology CDS 1891 2166 . + 0 ID=cds-TGC82025.1;Parent=gene-C9F09_21890;Dbxref=NCBI_GP:TGC82025.1;Name=TGC82025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=C9F09_21890;product=DUF1471 domain-containing protein;protein_id=TGC82025.1;transl_table=11 ##sequence-region PYKB01000630.1 1 2238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000630.1 Genbank region 1 2238 . + . ID=PYKB01000630.1:1..2238;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000630.1 Genbank gene 1 355 . + . ID=gene-C9F09_09335;Name=C9F09_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09335;partial=true;start_range=.,1 PYKB01000630.1 Protein Homology CDS 1 355 . + 1 ID=cds-TGC94775.1;Parent=gene-C9F09_09335;Dbxref=NCBI_GP:TGC94775.1;Name=TGC94775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014599107.1;locus_tag=C9F09_09335;partial=true;product=MFS transporter;protein_id=TGC94775.1;start_range=.,1;transl_table=11 PYKB01000630.1 Genbank gene 406 1155 . + . ID=gene-C9F09_09340;Name=C9F09_09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09340 PYKB01000630.1 Protein Homology CDS 406 1155 . + 0 ID=cds-TGC94776.1;Parent=gene-C9F09_09340;Dbxref=NCBI_GP:TGC94776.1;Name=TGC94776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523094.1;locus_tag=C9F09_09340;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=TGC94776.1;transl_table=11 PYKB01000630.1 Genbank gene 1169 2014 . + . ID=gene-C9F09_09345;Name=C9F09_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09345 PYKB01000630.1 Protein Homology CDS 1169 2014 . + 0 ID=cds-TGC94777.1;Parent=gene-C9F09_09345;Dbxref=NCBI_GP:TGC94777.1;Name=TGC94777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805764.1;locus_tag=C9F09_09345;product=transketolase;protein_id=TGC94777.1;transl_table=11 PYKB01000630.1 Genbank gene 2014 2238 . + . ID=gene-C9F09_09350;Name=C9F09_09350;end_range=2238,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09350;partial=true PYKB01000630.1 Protein Homology CDS 2014 2238 . + 0 ID=cds-TGC94778.1;Parent=gene-C9F09_09350;Dbxref=NCBI_GP:TGC94778.1;Name=TGC94778.1;end_range=2238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183482.1;locus_tag=C9F09_09350;partial=true;product=transketolase;protein_id=TGC94778.1;transl_table=11 ##sequence-region PYKB01000503.1 1 2223 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000503.1 Genbank region 1 2223 . + . ID=PYKB01000503.1:1..2223;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000503.1 Genbank pseudogene 63 1610 . - . ID=gene-C9F09_06470;Name=C9F09_06470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_06470;pseudo=true PYKB01000503.1 Protein Homology CDS 63 1610 . - 0 ID=cds-C9F09_06470;Parent=gene-C9F09_06470;Note=involved in fimbria production%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=C9F09_06470;product=outer membrane usher protein;pseudo=true;transl_table=11 PYKB01000503.1 Genbank gene 1615 2223 . - . ID=gene-C9F09_06475;Name=C9F09_06475;end_range=2223,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06475;partial=true PYKB01000503.1 Protein Homology CDS 1615 2223 . - 0 ID=cds-TGC97532.1;Parent=gene-C9F09_06475;Dbxref=NCBI_GP:TGC97532.1;Name=TGC97532.1;end_range=2223,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=C9F09_06475;partial=true;product=hypothetical protein;protein_id=TGC97532.1;transl_table=11 ##sequence-region PYKB01000410.1 1 2223 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000410.1 Genbank region 1 2223 . + . ID=PYKB01000410.1:1..2223;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000410.1 Genbank gene 1 861 . + . ID=gene-C9F09_04690;Name=C9F09_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04690;partial=true;start_range=.,1 PYKB01000410.1 Protein Homology CDS 1 861 . + 0 ID=cds-TGC99429.1;Parent=gene-C9F09_04690;Dbxref=NCBI_GP:TGC99429.1;Name=TGC99429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457375.1;locus_tag=C9F09_04690;partial=true;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=TGC99429.1;start_range=.,1;transl_table=11 PYKB01000410.1 Genbank gene 920 1630 . - . ID=gene-C9F09_04695;Name=C9F09_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04695 PYKB01000410.1 Protein Homology CDS 920 1630 . - 0 ID=cds-TGC99430.1;Parent=gene-C9F09_04695;Dbxref=NCBI_GP:TGC99430.1;Name=TGC99430.1;Note=regulates expression of genes involved in L-fucose utilization;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457374.1;locus_tag=C9F09_04695;product=transcriptional regulator;protein_id=TGC99430.1;transl_table=11 PYKB01000410.1 Genbank gene 1688 2110 . - . ID=gene-C9F09_04700;Name=C9F09_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04700 PYKB01000410.1 Protein Homology CDS 1688 2110 . - 0 ID=cds-TGC99431.1;Parent=gene-C9F09_04700;Dbxref=NCBI_GP:TGC99431.1;Name=TGC99431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457373.1;locus_tag=C9F09_04700;product=L-fucose mutarotase;protein_id=TGC99431.1;transl_table=11 ##sequence-region PYKB01001520.1 1 2223 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001520.1 Genbank region 1 2223 . + . ID=PYKB01001520.1:1..2223;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001520.1 Genbank pseudogene 146 586 . + . ID=gene-C9F09_26360;Name=C9F09_26360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_26360;pseudo=true PYKB01001520.1 Protein Homology CDS 146 586 . + 0 ID=cds-C9F09_26360;Parent=gene-C9F09_26360;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=C9F09_26360;product=nitrate/nitrite two-component system sensor histidine kinase NarX;pseudo=true;transl_table=11 PYKB01001520.1 Genbank gene 579 1229 . + . ID=gene-C9F09_26365;Name=C9F09_26365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26365 PYKB01001520.1 Protein Homology CDS 579 1229 . + 0 ID=cds-TGC76783.1;Parent=gene-C9F09_26365;Dbxref=NCBI_GP:TGC76783.1;Name=TGC76783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=C9F09_26365;product=two-component system response regulator NarL;protein_id=TGC76783.1;transl_table=11 PYKB01001520.1 Genbank gene 1230 2223 . - . ID=gene-C9F09_26370;Name=C9F09_26370;end_range=2223,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26370;partial=true PYKB01001520.1 Protein Homology CDS 1230 2223 . - 1 ID=cds-TGC76784.1;Parent=gene-C9F09_26370;Dbxref=NCBI_GP:TGC76784.1;Name=TGC76784.1;end_range=2223,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=C9F09_26370;partial=true;product=invasin;protein_id=TGC76784.1;transl_table=11 ##sequence-region PYKB01001447.1 1 2218 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001447.1 Genbank region 1 2218 . + . ID=PYKB01001447.1:1..2218;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001447.1 Genbank gene 1 309 . - . ID=gene-C9F09_25145;Name=C9F09_25145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25145;partial=true;start_range=.,1 PYKB01001447.1 Protein Homology CDS 1 309 . - 0 ID=cds-TGC78304.1;Parent=gene-C9F09_25145;Dbxref=NCBI_GP:TGC78304.1;Name=TGC78304.1;Note=ethanolamine utilization protein%3B involved in the degredation of ethanolamine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=C9F09_25145;partial=true;product=ethanolamine utilization protein EutS;protein_id=TGC78304.1;start_range=.,1;transl_table=11 PYKB01001447.1 Genbank gene 727 2218 . - . ID=gene-C9F09_25150;Name=C9F09_25150;end_range=2218,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25150;partial=true PYKB01001447.1 Protein Homology CDS 727 2218 . - 1 ID=cds-TGC78305.1;Parent=gene-C9F09_25150;Dbxref=NCBI_GP:TGC78305.1;Name=TGC78305.1;end_range=2218,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457006.1;locus_tag=C9F09_25150;partial=true;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=TGC78305.1;transl_table=11 ##sequence-region PYKB01001449.1 1 8990 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001449.1 Genbank region 1 8990 . + . ID=PYKB01001449.1:1..8990;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001449.1 Genbank gene 1 224 . - . ID=gene-C9F09_25170;Name=C9F09_25170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25170;partial=true;start_range=.,1 PYKB01001449.1 Protein Homology CDS 1 224 . - 0 ID=cds-TGC78269.1;Parent=gene-C9F09_25170;Dbxref=NCBI_GP:TGC78269.1;Name=TGC78269.1;Note=required for efficient enterobactin production;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=C9F09_25170;partial=true;product=thioesterase;protein_id=TGC78269.1;start_range=.,1;transl_table=11 PYKB01001449.1 Genbank gene 221 3277 . - . ID=gene-C9F09_25175;Name=C9F09_25175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25175 PYKB01001449.1 Protein Homology CDS 221 3277 . - 0 ID=cds-TGC78263.1;Parent=gene-C9F09_25175;Dbxref=NCBI_GP:TGC78263.1;Name=TGC78263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=C9F09_25175;product=hypothetical protein;protein_id=TGC78263.1;transl_table=11 PYKB01001449.1 Genbank gene 3542 4660 . + . ID=gene-C9F09_25180;Name=C9F09_25180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25180 PYKB01001449.1 Protein Homology CDS 3542 4660 . + 0 ID=cds-TGC78264.1;Parent=gene-C9F09_25180;Dbxref=NCBI_GP:TGC78264.1;Name=TGC78264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=C9F09_25180;product=AI-2E family transporter;protein_id=TGC78264.1;transl_table=11 PYKB01001449.1 Genbank gene 4843 4950 . + . ID=gene-C9F09_25185;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=C9F09_25185 PYKB01001449.1 cmsearch antisense_RNA 4843 4950 . + . ID=rna-C9F09_25185;Parent=gene-C9F09_25185;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00034,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_25185;product=antisense sRNA RprA PYKB01001449.1 cmsearch exon 4843 4950 . + . ID=exon-C9F09_25185-1;Parent=rna-C9F09_25185;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00034,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_25185;product=antisense sRNA RprA PYKB01001449.1 Genbank gene 5118 5477 . + . ID=gene-C9F09_25190;Name=C9F09_25190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25190 PYKB01001449.1 Protein Homology CDS 5118 5477 . + 0 ID=cds-TGC78265.1;Parent=gene-C9F09_25190;Dbxref=NCBI_GP:TGC78265.1;Name=TGC78265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=C9F09_25190;product=DUF1870 domain-containing protein;protein_id=TGC78265.1;transl_table=11 PYKB01001449.1 Genbank gene 5618 6829 . + . ID=gene-C9F09_25195;Name=C9F09_25195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25195 PYKB01001449.1 Protein Homology CDS 5618 6829 . + 0 ID=cds-TGC78266.1;Parent=gene-C9F09_25195;Dbxref=NCBI_GP:TGC78266.1;Name=TGC78266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=C9F09_25195;product=MFS transporter;protein_id=TGC78266.1;transl_table=11 PYKB01001449.1 Genbank gene 7321 7563 . + . ID=gene-C9F09_25200;Name=C9F09_25200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25200 PYKB01001449.1 Protein Homology CDS 7321 7563 . + 0 ID=cds-TGC78267.1;Parent=gene-C9F09_25200;Dbxref=NCBI_GP:TGC78267.1;Name=TGC78267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456192.1;locus_tag=C9F09_25200;product=cell division activator CedA;protein_id=TGC78267.1;transl_table=11 PYKB01001449.1 Genbank gene 7666 8990 . - . ID=gene-C9F09_25205;Name=C9F09_25205;end_range=8990,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25205;partial=true PYKB01001449.1 Protein Homology CDS 7666 8990 . - 2 ID=cds-TGC78268.1;Parent=gene-C9F09_25205;Dbxref=NCBI_GP:TGC78268.1;Name=TGC78268.1;end_range=8990,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=C9F09_25205;partial=true;product=L-cystine transporter;protein_id=TGC78268.1;transl_table=11 ##sequence-region PYKB01001135.1 1 2207 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001135.1 Genbank region 1 2207 . + . ID=PYKB01001135.1:1..2207;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001135.1 Genbank gene 1 655 . - . ID=gene-C9F09_19180;Name=C9F09_19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19180;partial=true;start_range=.,1 PYKB01001135.1 Protein Homology CDS 1 655 . - 0 ID=cds-TGC85099.1;Parent=gene-C9F09_19180;Dbxref=NCBI_GP:TGC85099.1;Name=TGC85099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454751.1;locus_tag=C9F09_19180;partial=true;product=LysR family transcriptional regulator;protein_id=TGC85099.1;start_range=.,1;transl_table=11 PYKB01001135.1 Genbank gene 741 1730 . + . ID=gene-C9F09_19185;Name=C9F09_19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19185 PYKB01001135.1 Protein Homology CDS 741 1730 . + 0 ID=cds-TGC85097.1;Parent=gene-C9F09_19185;Dbxref=NCBI_GP:TGC85097.1;Name=TGC85097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454750.1;locus_tag=C9F09_19185;product=aldo/keto reductase;protein_id=TGC85097.1;transl_table=11 PYKB01001135.1 Genbank gene 1764 2159 . - . ID=gene-C9F09_19190;Name=C9F09_19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19190 PYKB01001135.1 Protein Homology CDS 1764 2159 . - 0 ID=cds-TGC85098.1;Parent=gene-C9F09_19190;Dbxref=NCBI_GP:TGC85098.1;Name=TGC85098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454749.1;locus_tag=C9F09_19190;product=8-oxo-dGTP diphosphatase MutT;protein_id=TGC85098.1;transl_table=11 ##sequence-region PYKB01000121.1 1 2195 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000121.1 Genbank region 1 2195 . + . ID=PYKB01000121.1:1..2195;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000121.1 Genbank pseudogene 77 1660 . - . ID=gene-C9F09_01410;Name=C9F09_01410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_01410;pseudo=true PYKB01000121.1 Protein Homology CDS 77 1660 . - 0 ID=cds-C9F09_01410;Parent=gene-C9F09_01410;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455679.1;locus_tag=C9F09_01410;product=ribonuclease E;pseudo=true;transl_table=11 PYKB01000121.1 Genbank gene 1796 2044 . + . ID=gene-C9F09_01415;Name=C9F09_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01415 PYKB01000121.1 Protein Homology CDS 1796 2044 . + 0 ID=cds-TGD05034.1;Parent=gene-C9F09_01415;Dbxref=NCBI_GP:TGD05034.1;Name=TGD05034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539709.1;locus_tag=C9F09_01415;product=DUF2655 domain-containing protein;protein_id=TGD05034.1;transl_table=11 ##sequence-region PYKB01001185.1 1 2191 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001185.1 Genbank region 1 2191 . + . ID=PYKB01001185.1:1..2191;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001185.1 Genbank gene 1 199 . + . ID=gene-C9F09_20140;Name=C9F09_20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20140;partial=true;start_range=.,1 PYKB01001185.1 Protein Homology CDS 1 199 . + 1 ID=cds-TGC83816.1;Parent=gene-C9F09_20140;Dbxref=NCBI_GP:TGC83816.1;Name=TGC83816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455787.1;locus_tag=C9F09_20140;partial=true;product=phosphatidylglycerophosphatase B;protein_id=TGC83816.1;start_range=.,1;transl_table=11 PYKB01001185.1 Genbank gene 144 365 . - . ID=gene-C9F09_20145;Name=C9F09_20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20145 PYKB01001185.1 Protein Homology CDS 144 365 . - 0 ID=cds-TGC83817.1;Parent=gene-C9F09_20145;Dbxref=NCBI_GP:TGC83817.1;Name=TGC83817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005149710.1;locus_tag=C9F09_20145;product=hypothetical protein;protein_id=TGC83817.1;transl_table=11 PYKB01001185.1 Genbank gene 349 657 . + . ID=gene-C9F09_20150;Name=C9F09_20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20150 PYKB01001185.1 Protein Homology CDS 349 657 . + 0 ID=cds-TGC83818.1;Parent=gene-C9F09_20150;Dbxref=NCBI_GP:TGC83818.1;Name=TGC83818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455788.1;locus_tag=C9F09_20150;product=DUF1049 domain-containing protein;protein_id=TGC83818.1;transl_table=11 PYKB01001185.1 Genbank gene 664 1833 . + . ID=gene-C9F09_20155;Name=C9F09_20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20155 PYKB01001185.1 Protein Homology CDS 664 1833 . + 0 ID=cds-TGC83819.1;Parent=gene-C9F09_20155;Dbxref=NCBI_GP:TGC83819.1;Name=TGC83819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=C9F09_20155;product=lipopolysaccharide assembly protein LapB;protein_id=TGC83819.1;transl_table=11 PYKB01001185.1 Genbank gene 1808 2008 . - . ID=gene-C9F09_20160;Name=C9F09_20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20160 PYKB01001185.1 Protein Homology CDS 1808 2008 . - 0 ID=cds-TGC83820.1;Parent=gene-C9F09_20160;Dbxref=NCBI_GP:TGC83820.1;Name=TGC83820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344075.1;locus_tag=C9F09_20160;product=hypothetical protein;protein_id=TGC83820.1;transl_table=11 PYKB01001185.1 Genbank pseudogene 2024 2149 . + . ID=gene-C9F09_20165;Name=C9F09_20165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_20165;pseudo=true PYKB01001185.1 Protein Homology CDS 2024 2149 . + 0 ID=cds-C9F09_20165;Parent=gene-C9F09_20165;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455790.1;locus_tag=C9F09_20165;product=orotidine-5'-phosphate decarboxylase;pseudo=true;transl_table=11 ##sequence-region PYKB01000800.1 1 2187 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000800.1 Genbank region 1 2187 . + . ID=PYKB01000800.1:1..2187;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000800.1 Genbank gene 91 294 . + . ID=gene-C9F09_12440;Name=C9F09_12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12440 PYKB01000800.1 Protein Homology CDS 91 294 . + 0 ID=cds-TGC92162.1;Parent=gene-C9F09_12440;Dbxref=NCBI_GP:TGC92162.1;Name=TGC92162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519037.1;locus_tag=C9F09_12440;product=hypothetical protein;protein_id=TGC92162.1;transl_table=11 PYKB01000800.1 Genbank gene 255 611 . + . ID=gene-C9F09_12445;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9F09_12445 PYKB01000800.1 Protein Homology CDS 255 611 . + 0 ID=cds-TGC92163.1;Parent=gene-C9F09_12445;Dbxref=NCBI_GP:TGC92163.1;Name=TGC92163.1;gbkey=CDS;gene=hypA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457248.1;locus_tag=C9F09_12445;product=protein HypA;protein_id=TGC92163.1;transl_table=11 PYKB01000800.1 Genbank gene 680 1552 . + . ID=gene-C9F09_12450;Name=C9F09_12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12450 PYKB01000800.1 Protein Homology CDS 680 1552 . + 0 ID=cds-TGC92164.1;Parent=gene-C9F09_12450;Dbxref=NCBI_GP:TGC92164.1;Name=TGC92164.1;Note=GTP hydrolase involved in nickel liganding into hydrogenases;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457249.1;locus_tag=C9F09_12450;product=hydrogenase nickel incorporation protein HypB;protein_id=TGC92164.1;transl_table=11 PYKB01000800.1 Genbank gene 1543 1815 . + . ID=gene-C9F09_12455;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=C9F09_12455 PYKB01000800.1 Protein Homology CDS 1543 1815 . + 0 ID=cds-TGC92165.1;Parent=gene-C9F09_12455;Dbxref=NCBI_GP:TGC92165.1;Name=TGC92165.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457250.1;locus_tag=C9F09_12455;product=hydrogenase assembly protein HypC;protein_id=TGC92165.1;transl_table=11 PYKB01000800.1 Genbank gene 1815 2187 . + . ID=gene-C9F09_12460;Name=C9F09_12460;end_range=2187,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12460;partial=true PYKB01000800.1 Protein Homology CDS 1815 2187 . + 0 ID=cds-TGC92166.1;Parent=gene-C9F09_12460;Dbxref=NCBI_GP:TGC92166.1;Name=TGC92166.1;end_range=2187,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457251.1;locus_tag=C9F09_12460;partial=true;product=hydrogenase expression/formation protein HypD;protein_id=TGC92166.1;transl_table=11 ##sequence-region PYKB01001023.1 1 2186 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001023.1 Genbank region 1 2186 . + . ID=PYKB01001023.1:1..2186;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001023.1 Genbank gene 1 748 . - . ID=gene-C9F09_17075;Name=C9F09_17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17075;partial=true;start_range=.,1 PYKB01001023.1 Protein Homology CDS 1 748 . - 0 ID=cds-TGC87736.1;Parent=gene-C9F09_17075;Dbxref=NCBI_GP:TGC87736.1;Name=TGC87736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=C9F09_17075;partial=true;product=type I 3-dehydroquinate dehydratase;protein_id=TGC87736.1;start_range=.,1;transl_table=11 PYKB01001023.1 Genbank gene 793 1659 . - . ID=gene-C9F09_17080;Name=C9F09_17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17080 PYKB01001023.1 Protein Homology CDS 793 1659 . - 0 ID=cds-TGC87737.1;Parent=gene-C9F09_17080;Dbxref=NCBI_GP:TGC87737.1;Name=TGC87737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=C9F09_17080;product=quinate/shikimate dehydrogenase;protein_id=TGC87737.1;transl_table=11 PYKB01001023.1 Genbank gene 1726 2186 . - . ID=gene-C9F09_17085;Name=C9F09_17085;end_range=2186,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17085;partial=true PYKB01001023.1 Protein Homology CDS 1726 2186 . - 2 ID=cds-TGC87738.1;Parent=gene-C9F09_17085;Dbxref=NCBI_GP:TGC87738.1;Name=TGC87738.1;end_range=2186,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=C9F09_17085;partial=true;product=MFS transporter;protein_id=TGC87738.1;transl_table=11 ##sequence-region PYKB01001647.1 1 2183 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001647.1 Genbank region 1 2183 . + . ID=PYKB01001647.1:1..2183;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001647.1 Genbank gene 1 894 . + . ID=gene-C9F09_28765;Name=C9F09_28765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28765;partial=true;start_range=.,1 PYKB01001647.1 Protein Homology CDS 1 894 . + 0 ID=cds-TGC73637.1;Parent=gene-C9F09_28765;Dbxref=NCBI_GP:TGC73637.1;Name=TGC73637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=C9F09_28765;partial=true;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=TGC73637.1;start_range=.,1;transl_table=11 PYKB01001647.1 Genbank gene 980 2113 . - . ID=gene-C9F09_28770;Name=C9F09_28770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28770 PYKB01001647.1 Protein Homology CDS 980 2113 . - 0 ID=cds-TGC73638.1;Parent=gene-C9F09_28770;Dbxref=NCBI_GP:TGC73638.1;Name=TGC73638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001611922.1;locus_tag=C9F09_28770;product=PTS glucose transporter subunit IIBC;protein_id=TGC73638.1;transl_table=11 ##sequence-region PYKB01000682.1 1 2183 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000682.1 Genbank region 1 2183 . + . ID=PYKB01000682.1:1..2183;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000682.1 Genbank gene 1 812 . + . ID=gene-C9F09_10250;Name=C9F09_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10250;partial=true;start_range=.,1 PYKB01000682.1 Protein Homology CDS 1 812 . + 2 ID=cds-TGC93934.1;Parent=gene-C9F09_10250;Dbxref=NCBI_GP:TGC93934.1;Name=TGC93934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457622.1;locus_tag=C9F09_10250;partial=true;product=glutathione-dependent reductase;protein_id=TGC93934.1;start_range=.,1;transl_table=11 PYKB01000682.1 Genbank gene 936 1301 . + . ID=gene-C9F09_10255;Name=C9F09_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10255 PYKB01000682.1 Protein Homology CDS 936 1301 . + 0 ID=cds-TGC93935.1;Parent=gene-C9F09_10255;Dbxref=NCBI_GP:TGC93935.1;Name=TGC93935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457623.1;locus_tag=C9F09_10255;product=DUF805 domain-containing protein;protein_id=TGC93935.1;transl_table=11 PYKB01000682.1 Genbank gene 1340 2183 . - . ID=gene-C9F09_10260;Name=C9F09_10260;end_range=2183,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10260;partial=true PYKB01000682.1 Protein Homology CDS 1340 2183 . - 1 ID=cds-TGC93936.1;Parent=gene-C9F09_10260;Dbxref=NCBI_GP:TGC93936.1;Name=TGC93936.1;end_range=2183,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=C9F09_10260;partial=true;product=LysR family transcriptional regulator;protein_id=TGC93936.1;transl_table=11 ##sequence-region PYKB01000576.1 1 2179 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000576.1 Genbank region 1 2179 . + . ID=PYKB01000576.1:1..2179;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000576.1 Genbank gene 1 268 . + . ID=gene-C9F09_08185;Name=C9F09_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08185;partial=true;start_range=.,1 PYKB01000576.1 Protein Homology CDS 1 268 . + 1 ID=cds-TGC95921.1;Parent=gene-C9F09_08185;Dbxref=NCBI_GP:TGC95921.1;Name=TGC95921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=C9F09_08185;partial=true;product=4-amino-4-deoxy-L-arabinose-phospho-UDP flippase;protein_id=TGC95921.1;start_range=.,1;transl_table=11 PYKB01000576.1 Genbank gene 263 520 . - . ID=gene-C9F09_08190;Name=C9F09_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08190 PYKB01000576.1 Protein Homology CDS 263 520 . - 0 ID=cds-TGC95922.1;Parent=gene-C9F09_08190;Dbxref=NCBI_GP:TGC95922.1;Name=TGC95922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=C9F09_08190;product=signal transduction protein PmrD;protein_id=TGC95922.1;transl_table=11 PYKB01000576.1 Genbank gene 618 1985 . - . ID=gene-C9F09_08195;Name=C9F09_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08195 PYKB01000576.1 Protein Homology CDS 618 1985 . - 0 ID=cds-TGC95923.1;Parent=gene-C9F09_08195;Dbxref=NCBI_GP:TGC95923.1;Name=TGC95923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=C9F09_08195;product=o-succinylbenzoate--CoA ligase;protein_id=TGC95923.1;transl_table=11 PYKB01000576.1 Genbank gene 1982 2179 . - . ID=gene-C9F09_08200;Name=C9F09_08200;end_range=2179,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08200;partial=true PYKB01000576.1 Protein Homology CDS 1982 2179 . - 0 ID=cds-TGC95924.1;Parent=gene-C9F09_08200;Dbxref=NCBI_GP:TGC95924.1;Name=TGC95924.1;end_range=2179,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456849.1;locus_tag=C9F09_08200;partial=true;product=hypothetical protein;protein_id=TGC95924.1;transl_table=11 ##sequence-region PYKB01001138.1 1 2172 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001138.1 Genbank region 1 2172 . + . ID=PYKB01001138.1:1..2172;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001138.1 Genbank gene 1 1462 . - . ID=gene-C9F09_19245;Name=C9F09_19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19245;partial=true;start_range=.,1 PYKB01001138.1 Protein Homology CDS 1 1462 . - 0 ID=cds-TGC84989.1;Parent=gene-C9F09_19245;Dbxref=NCBI_GP:TGC84989.1;Name=TGC84989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044774.1;locus_tag=C9F09_19245;partial=true;product=AIDA autotransporter-like protein ShdA;protein_id=TGC84989.1;start_range=.,1;transl_table=11 PYKB01001138.1 Genbank gene 2071 2172 . - . ID=gene-C9F09_19250;Name=C9F09_19250;end_range=2172,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19250;partial=true PYKB01001138.1 Protein Homology CDS 2071 2172 . - 0 ID=cds-TGC84990.1;Parent=gene-C9F09_19250;Dbxref=NCBI_GP:TGC84990.1;Name=TGC84990.1;end_range=2172,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461258.3;locus_tag=C9F09_19250;partial=true;product=NADH:ubiquinone oxidoreductase subunit N;protein_id=TGC84990.1;transl_table=11 ##sequence-region PYKB01000209.1 1 2169 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000209.1 Genbank region 1 2169 . + . ID=PYKB01000209.1:1..2169;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000209.1 Genbank gene 274 729 . + . ID=gene-C9F09_02270;Name=C9F09_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02270 PYKB01000209.1 Protein Homology CDS 274 729 . + 0 ID=cds-TGD03551.1;Parent=gene-C9F09_02270;Dbxref=NCBI_GP:TGD03551.1;Name=TGD03551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=C9F09_02270;product=DUF4385 domain-containing protein;protein_id=TGD03551.1;transl_table=11 PYKB01000209.1 Genbank gene 833 2134 . + . ID=gene-C9F09_02275;Name=C9F09_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02275 PYKB01000209.1 Protein Homology CDS 833 2134 . + 0 ID=cds-TGD03552.1;Parent=gene-C9F09_02275;Dbxref=NCBI_GP:TGD03552.1;Name=TGD03552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=C9F09_02275;product=MFS transporter;protein_id=TGD03552.1;transl_table=11 ##sequence-region PYKB01000748.1 1 8916 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000748.1 Genbank region 1 8916 . + . ID=PYKB01000748.1:1..8916;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000748.1 Genbank gene 71 439 . - . ID=gene-C9F09_11505;Name=C9F09_11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11505 PYKB01000748.1 Protein Homology CDS 71 439 . - 0 ID=cds-TGC92941.1;Parent=gene-C9F09_11505;Dbxref=NCBI_GP:TGC92941.1;Name=TGC92941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025205684.1;locus_tag=C9F09_11505;product=FosA family fosfomycin resistance glutathione transferase;protein_id=TGC92941.1;transl_table=11 PYKB01000748.1 Genbank gene 872 2989 . - . ID=gene-C9F09_11510;Name=C9F09_11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11510 PYKB01000748.1 Protein Homology CDS 872 2989 . - 0 ID=cds-TGC92942.1;Parent=gene-C9F09_11510;Dbxref=NCBI_GP:TGC92942.1;Name=TGC92942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155072.1;locus_tag=C9F09_11510;product=ATP-dependent helicase;protein_id=TGC92942.1;transl_table=11 PYKB01000748.1 Genbank gene 2986 6600 . - . ID=gene-C9F09_11515;Name=C9F09_11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11515 PYKB01000748.1 Protein Homology CDS 2986 6600 . - 0 ID=cds-TGC92943.1;Parent=gene-C9F09_11515;Dbxref=NCBI_GP:TGC92943.1;Name=TGC92943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001412807.1;locus_tag=C9F09_11515;product=helicase;protein_id=TGC92943.1;transl_table=11 ##sequence-region PYKB01001130.1 1 2167 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001130.1 Genbank region 1 2167 . + . ID=PYKB01001130.1:1..2167;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001130.1 Genbank gene 1 216 . - . ID=gene-C9F09_19025;Name=C9F09_19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19025;partial=true;start_range=.,1 PYKB01001130.1 Protein Homology CDS 1 216 . - 0 ID=cds-TGC85255.1;Parent=gene-C9F09_19025;Dbxref=NCBI_GP:TGC85255.1;Name=TGC85255.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457529.1;locus_tag=C9F09_19025;partial=true;product=MFS transporter;protein_id=TGC85255.1;start_range=.,1;transl_table=11 PYKB01001130.1 Genbank gene 621 1805 . + . ID=gene-C9F09_19030;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=C9F09_19030 PYKB01001130.1 Protein Homology CDS 621 1805 . + 0 ID=cds-TGC85256.1;Parent=gene-C9F09_19030;Dbxref=NCBI_GP:TGC85256.1;Name=TGC85256.1;gbkey=CDS;gene=uxuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457530.1;locus_tag=C9F09_19030;product=mannonate dehydratase;protein_id=TGC85256.1;transl_table=11 PYKB01001130.1 Genbank pseudogene 1916 2089 . + . ID=gene-C9F09_19035;Name=C9F09_19035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_19035;pseudo=true PYKB01001130.1 Protein Homology CDS 1916 2089 . + 0 ID=cds-C9F09_19035;Parent=gene-C9F09_19035;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457531.1;locus_tag=C9F09_19035;product=fructuronate reductase;pseudo=true;transl_table=11 ##sequence-region PYKB01000552.1 1 2167 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000552.1 Genbank region 1 2167 . + . ID=PYKB01000552.1:1..2167;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000552.1 Genbank pseudogene 519 1979 . + . ID=gene-C9F09_07620;Name=C9F09_07620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07620;pseudo=true PYKB01000552.1 Protein Homology CDS 519 1979 . + 0 ID=cds-C9F09_07620;Parent=gene-C9F09_07620;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641365.1;locus_tag=C9F09_07620;product=ABC-2 type transporter family protein;pseudo=true;transl_table=11 PYKB01000552.1 Genbank gene 1979 2167 . + . ID=gene-C9F09_07625;Name=C9F09_07625;end_range=2167,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07625;partial=true PYKB01000552.1 Protein Homology CDS 1979 2167 . + 0 ID=cds-TGC96475.1;Parent=gene-C9F09_07625;Dbxref=NCBI_GP:TGC96475.1;Name=TGC96475.1;end_range=2167,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=C9F09_07625;partial=true;product=hypothetical protein;protein_id=TGC96475.1;transl_table=11 ##sequence-region PYKB01001654.1 1 2165 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001654.1 Genbank region 1 2165 . + . ID=PYKB01001654.1:1..2165;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001654.1 Genbank pseudogene 56 415 . - . ID=gene-C9F09_28850;Name=C9F09_28850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28850;pseudo=true PYKB01001654.1 Protein Homology CDS 56 415 . - 0 ID=cds-C9F09_28850;Parent=gene-C9F09_28850;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=C9F09_28850;product=protein disulfide oxidoreductase DsbA;pseudo=true;transl_table=11 PYKB01001654.1 Genbank gene 432 1418 . - . ID=gene-C9F09_28855;Name=C9F09_28855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28855 PYKB01001654.1 Protein Homology CDS 432 1418 . - 0 ID=cds-TGC73441.1;Parent=gene-C9F09_28855;Dbxref=NCBI_GP:TGC73441.1;Name=TGC73441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458052.1;locus_tag=C9F09_28855;product=stress response kinase A;protein_id=TGC73441.1;transl_table=11 PYKB01001654.1 Genbank gene 1498 1767 . - . ID=gene-C9F09_28860;Name=C9F09_28860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28860 PYKB01001654.1 Protein Homology CDS 1498 1767 . - 0 ID=cds-TGC73442.1;Parent=gene-C9F09_28860;Dbxref=NCBI_GP:TGC73442.1;Name=TGC73442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=C9F09_28860;product=DUF1040 domain-containing protein;protein_id=TGC73442.1;transl_table=11 PYKB01001654.1 Genbank gene 1837 2165 . + . ID=gene-C9F09_28865;Name=mobA;end_range=2165,.;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=C9F09_28865;partial=true PYKB01001654.1 Protein Homology CDS 1837 2165 . + 0 ID=cds-TGC73443.1;Parent=gene-C9F09_28865;Dbxref=NCBI_GP:TGC73443.1;Name=TGC73443.1;Note=in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis;end_range=2165,.;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458054.1;locus_tag=C9F09_28865;partial=true;product=molybdenum cofactor guanylyltransferase MobA;protein_id=TGC73443.1;transl_table=11 ##sequence-region PYKB01000771.1 1 2163 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000771.1 Genbank region 1 2163 . + . ID=PYKB01000771.1:1..2163;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000771.1 Genbank gene 1 1196 . - . ID=gene-C9F09_11960;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=C9F09_11960;partial=true;start_range=.,1 PYKB01000771.1 Protein Homology CDS 1 1196 . - 0 ID=cds-TGC92581.1;Parent=gene-C9F09_11960;Dbxref=NCBI_GP:TGC92581.1;Name=TGC92581.1;Note=multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate;gbkey=CDS;gene=fadJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456929.1;locus_tag=C9F09_11960;partial=true;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=TGC92581.1;start_range=.,1;transl_table=11 PYKB01000771.1 Genbank gene 1196 2163 . - . ID=gene-C9F09_11965;Name=C9F09_11965;end_range=2163,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11965;partial=true PYKB01000771.1 Protein Homology CDS 1196 2163 . - 2 ID=cds-TGC92582.1;Parent=gene-C9F09_11965;Dbxref=NCBI_GP:TGC92582.1;Name=TGC92582.1;end_range=2163,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456930.1;locus_tag=C9F09_11965;partial=true;product=acetyl-CoA C-acyltransferase FadI;protein_id=TGC92582.1;transl_table=11 ##sequence-region PYKB01001730.1 1 2161 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001730.1 Genbank region 1 2161 . + . ID=PYKB01001730.1:1..2161;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001730.1 Genbank gene 1 963 . - . ID=gene-C9F09_30305;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=C9F09_30305;partial=true;start_range=.,1 PYKB01001730.1 Protein Homology CDS 1 963 . - 0 ID=cds-TGC71157.1;Parent=gene-C9F09_30305;Dbxref=NCBI_GP:TGC71157.1;Name=TGC71157.1;Note=the hook connects flagellar basal body to the flagellar filament;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455670.1;locus_tag=C9F09_30305;partial=true;product=flagellar hook protein FlgE;protein_id=TGC71157.1;start_range=.,1;transl_table=11 PYKB01001730.1 Genbank gene 990 1688 . - . ID=gene-C9F09_30310;Name=C9F09_30310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30310 PYKB01001730.1 Protein Homology CDS 990 1688 . - 0 ID=cds-TGC71158.1;Parent=gene-C9F09_30310;Dbxref=NCBI_GP:TGC71158.1;Name=TGC71158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455669.1;locus_tag=C9F09_30310;product=flagellar basal body rod modification protein FlgD;protein_id=TGC71158.1;transl_table=11 PYKB01001730.1 Genbank gene 1700 2104 . - . ID=gene-C9F09_30315;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=C9F09_30315 PYKB01001730.1 Protein Homology CDS 1700 2104 . - 0 ID=cds-TGC71159.1;Parent=gene-C9F09_30315;Dbxref=NCBI_GP:TGC71159.1;Name=TGC71159.1;gbkey=CDS;gene=flgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=C9F09_30315;product=flagellar basal body rod protein FlgC;protein_id=TGC71159.1;transl_table=11 ##sequence-region PYKB01000063.1 1 2157 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000063.1 Genbank region 1 2157 . + . ID=PYKB01000063.1:1..2157;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000063.1 Genbank gene 41 652 . - . ID=gene-C9F09_00700;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=C9F09_00700 PYKB01000063.1 Protein Homology CDS 41 652 . - 0 ID=cds-TGD06245.1;Parent=gene-C9F09_00700;Dbxref=NCBI_GP:TGD06245.1;Name=TGD06245.1;gbkey=CDS;gene=lolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415411.2;locus_tag=C9F09_00700;product=outer membrane lipoprotein chaperone LolA;protein_id=TGD06245.1;transl_table=11 PYKB01000063.1 Genbank gene 795 2157 . - . ID=gene-C9F09_00705;Name=C9F09_00705;end_range=2157,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00705;partial=true PYKB01000063.1 Protein Homology CDS 795 2157 . - 1 ID=cds-TGD06244.1;Parent=gene-C9F09_00705;Dbxref=NCBI_GP:TGD06244.1;Name=TGD06244.1;end_range=2157,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455448.1;locus_tag=C9F09_00705;partial=true;product=DNA translocase FtsK;protein_id=TGD06244.1;transl_table=11 ##sequence-region PYKB01001355.1 1 2150 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001355.1 Genbank region 1 2150 . + . ID=PYKB01001355.1:1..2150;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001355.1 Genbank gene 1 654 . - . ID=gene-C9F09_23300;Name=C9F09_23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23300;partial=true;start_range=.,1 PYKB01001355.1 Protein Homology CDS 1 654 . - 0 ID=cds-TGC80437.1;Parent=gene-C9F09_23300;Dbxref=NCBI_GP:TGC80437.1;Name=TGC80437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=C9F09_23300;partial=true;product=serine hydroxymethyltransferase;protein_id=TGC80437.1;start_range=.,1;transl_table=11 PYKB01001355.1 Genbank gene 979 2150 . + . ID=gene-C9F09_23305;Name=C9F09_23305;end_range=2150,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23305;partial=true PYKB01001355.1 Protein Homology CDS 979 2150 . + 0 ID=cds-TGC80438.1;Parent=gene-C9F09_23305;Dbxref=NCBI_GP:TGC80438.1;Name=TGC80438.1;end_range=2150,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457086.1;locus_tag=C9F09_23305;partial=true;product=NO-inducible flavohemoprotein;protein_id=TGC80438.1;transl_table=11 ##sequence-region PYKB01001109.1 1 2146 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001109.1 Genbank region 1 2146 . + . ID=PYKB01001109.1:1..2146;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001109.1 Genbank pseudogene 146 1789 . - . ID=gene-C9F09_18655;Name=C9F09_18655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18655;pseudo=true PYKB01001109.1 Protein Homology CDS 146 1789 . - 0 ID=cds-C9F09_18655;Parent=gene-C9F09_18655;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=C9F09_18655;product=multidrug ABC transporter permease/ATP-binding protein;pseudo=true;transl_table=11 PYKB01001109.1 Genbank gene 1865 2146 . - . ID=gene-C9F09_18660;Name=C9F09_18660;end_range=2146,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18660;partial=true PYKB01001109.1 Protein Homology CDS 1865 2146 . - 0 ID=cds-TGC85748.1;Parent=gene-C9F09_18660;Dbxref=NCBI_GP:TGC85748.1;Name=TGC85748.1;end_range=2146,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456809.1;locus_tag=C9F09_18660;partial=true;product=DNA oxidative demethylase AlkB;protein_id=TGC85748.1;transl_table=11 ##sequence-region PYKB01000825.1 1 2143 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000825.1 Genbank region 1 2143 . + . ID=PYKB01000825.1:1..2143;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000825.1 Genbank gene 1 209 . - . ID=gene-C9F09_12995;Name=C9F09_12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12995;partial=true;start_range=.,1 PYKB01000825.1 Protein Homology CDS 1 209 . - 0 ID=cds-TGC91680.1;Parent=gene-C9F09_12995;Dbxref=NCBI_GP:TGC91680.1;Name=TGC91680.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=C9F09_12995;partial=true;product=amidophosphoribosyltransferase;protein_id=TGC91680.1;start_range=.,1;transl_table=11 PYKB01000825.1 Genbank gene 247 735 . - . ID=gene-C9F09_13000;Name=C9F09_13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13000 PYKB01000825.1 Protein Homology CDS 247 735 . - 0 ID=cds-TGC91681.1;Parent=gene-C9F09_13000;Dbxref=NCBI_GP:TGC91681.1;Name=TGC91681.1;Note=membrane protein required for colicin V production;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456905.1;locus_tag=C9F09_13000;product=colicin V production protein;protein_id=TGC91681.1;transl_table=11 PYKB01000825.1 Genbank gene 1046 1720 . - . ID=gene-C9F09_13005;Name=C9F09_13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13005 PYKB01000825.1 Protein Homology CDS 1046 1720 . - 0 ID=cds-TGC91682.1;Parent=gene-C9F09_13005;Dbxref=NCBI_GP:TGC91682.1;Name=TGC91682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=C9F09_13005;product=cell division protein DedD;protein_id=TGC91682.1;transl_table=11 PYKB01000825.1 Genbank gene 1710 2143 . - . ID=gene-C9F09_13010;Name=C9F09_13010;end_range=2143,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13010;partial=true PYKB01000825.1 Protein Homology CDS 1710 2143 . - 2 ID=cds-TGC91683.1;Parent=gene-C9F09_13010;Dbxref=NCBI_GP:TGC91683.1;Name=TGC91683.1;end_range=2143,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456907.1;locus_tag=C9F09_13010;partial=true;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=TGC91683.1;transl_table=11 ##sequence-region PYKB01000943.1 1 2140 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000943.1 Genbank region 1 2140 . + . ID=PYKB01000943.1:1..2140;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000943.1 Genbank pseudogene 110 529 . - . ID=gene-C9F09_15575;Name=C9F09_15575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15575;pseudo=true PYKB01000943.1 Protein Homology CDS 110 529 . - 0 ID=cds-C9F09_15575;Parent=gene-C9F09_15575;Note=involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=C9F09_15575;product=sulfurtransferase FdhD;pseudo=true;transl_table=11 PYKB01000943.1 Genbank gene 724 1311 . + . ID=gene-C9F09_15580;Name=C9F09_15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15580 PYKB01000943.1 Protein Homology CDS 724 1311 . + 0 ID=cds-TGC89448.1;Parent=gene-C9F09_15580;Dbxref=NCBI_GP:TGC89448.1;Name=TGC89448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004591687.1;locus_tag=C9F09_15580;product=sulfate ABC transporter substrate-binding protein;protein_id=TGC89448.1;transl_table=11 PYKB01000943.1 Genbank gene 1360 2140 . + . ID=gene-C9F09_15585;Name=C9F09_15585;end_range=2140,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15585;partial=true PYKB01000943.1 Protein Homology CDS 1360 2140 . + 0 ID=cds-TGC89449.1;Parent=gene-C9F09_15585;Dbxref=NCBI_GP:TGC89449.1;Name=TGC89449.1;end_range=2140,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697017.1;locus_tag=C9F09_15585;partial=true;product=formate dehydrogenase;protein_id=TGC89449.1;transl_table=11 ##sequence-region PYKB01000509.1 1 8926 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000509.1 Genbank region 1 8926 . + . ID=PYKB01000509.1:1..8926;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000509.1 Genbank gene 1 244 . - . ID=gene-C9F09_06590;Name=C9F09_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06590;partial=true;start_range=.,1 PYKB01000509.1 Protein Homology CDS 1 244 . - 0 ID=cds-TGC97399.1;Parent=gene-C9F09_06590;Dbxref=NCBI_GP:TGC97399.1;Name=TGC97399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=C9F09_06590;partial=true;product=DNA endonuclease SmrA;protein_id=TGC97399.1;start_range=.,1;transl_table=11 PYKB01000509.1 Genbank gene 502 1017 . + . ID=gene-C9F09_06595;Name=C9F09_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06595 PYKB01000509.1 Protein Homology CDS 502 1017 . + 0 ID=cds-TGC97400.1;Parent=gene-C9F09_06595;Dbxref=NCBI_GP:TGC97400.1;Name=TGC97400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455845.1;locus_tag=C9F09_06595;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=TGC97400.1;transl_table=11 PYKB01000509.1 Genbank gene 1171 1965 . + . ID=gene-C9F09_06600;Name=C9F09_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06600 PYKB01000509.1 Protein Homology CDS 1171 1965 . + 0 ID=cds-TGC97401.1;Parent=gene-C9F09_06600;Dbxref=NCBI_GP:TGC97401.1;Name=TGC97401.1;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460619.3;locus_tag=C9F09_06600;product=transcriptional regulator FNR;protein_id=TGC97401.1;transl_table=11 PYKB01000509.1 Genbank gene 2116 3063 . + . ID=gene-C9F09_06605;Name=C9F09_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06605 PYKB01000509.1 Protein Homology CDS 2116 3063 . + 0 ID=cds-TGC97402.1;Parent=gene-C9F09_06605;Dbxref=NCBI_GP:TGC97402.1;Name=TGC97402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=C9F09_06605;product=universal stress protein UspE;protein_id=TGC97402.1;transl_table=11 PYKB01000509.1 Genbank gene 3118 3372 . - . ID=gene-C9F09_06610;Name=C9F09_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06610 PYKB01000509.1 Protein Homology CDS 3118 3372 . - 0 ID=cds-TGC97403.1;Parent=gene-C9F09_06610;Dbxref=NCBI_GP:TGC97403.1;Name=TGC97403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455842.1;locus_tag=C9F09_06610;product=DUF2534 domain-containing protein;protein_id=TGC97403.1;transl_table=11 PYKB01000509.1 Genbank gene 3611 4642 . + . ID=gene-C9F09_06615;Name=C9F09_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06615 PYKB01000509.1 Protein Homology CDS 3611 4642 . + 0 ID=cds-TGC97404.1;Parent=gene-C9F09_06615;Dbxref=NCBI_GP:TGC97404.1;Name=TGC97404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455841.1;locus_tag=C9F09_06615;product=mechanosensitive ion channel family protein;protein_id=TGC97404.1;transl_table=11 PYKB01000509.1 Genbank gene 4724 5326 . - . ID=gene-C9F09_06620;Name=C9F09_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06620 PYKB01000509.1 Protein Homology CDS 4724 5326 . - 0 ID=cds-TGC97405.1;Parent=gene-C9F09_06620;Dbxref=NCBI_GP:TGC97405.1;Name=TGC97405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=C9F09_06620;product=XRE family transcriptional regulator;protein_id=TGC97405.1;transl_table=11 PYKB01000509.1 Genbank gene 5370 6056 . + . ID=gene-C9F09_06625;Name=C9F09_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06625 PYKB01000509.1 Protein Homology CDS 5370 6056 . + 0 ID=cds-TGC97406.1;Parent=gene-C9F09_06625;Dbxref=NCBI_GP:TGC97406.1;Name=TGC97406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=C9F09_06625;product=hypothetical protein;protein_id=TGC97406.1;transl_table=11 PYKB01000509.1 Genbank gene 6084 6422 . + . ID=gene-C9F09_06630;Name=C9F09_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06630 PYKB01000509.1 Protein Homology CDS 6084 6422 . + 0 ID=cds-TGC97407.1;Parent=gene-C9F09_06630;Dbxref=NCBI_GP:TGC97407.1;Name=TGC97407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455838.1;locus_tag=C9F09_06630;product=hypothetical protein;protein_id=TGC97407.1;transl_table=11 PYKB01000509.1 Genbank gene 6529 7047 . - . ID=gene-C9F09_06635;Name=C9F09_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06635 PYKB01000509.1 Protein Homology CDS 6529 7047 . - 0 ID=cds-TGC97408.1;Parent=gene-C9F09_06635;Dbxref=NCBI_GP:TGC97408.1;Name=TGC97408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530156.1;locus_tag=C9F09_06635;product=peroxiredoxin;protein_id=TGC97408.1;transl_table=11 PYKB01000509.1 Genbank gene 7050 7880 . - . ID=gene-C9F09_06640;Name=C9F09_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06640 PYKB01000509.1 Protein Homology CDS 7050 7880 . - 0 ID=cds-TGC97409.1;Parent=gene-C9F09_06640;Dbxref=NCBI_GP:TGC97409.1;Name=TGC97409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531580.1;locus_tag=C9F09_06640;product=hypothetical protein;protein_id=TGC97409.1;transl_table=11 PYKB01000509.1 Genbank pseudogene 7907 8884 . - . ID=gene-C9F09_06645;Name=C9F09_06645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_06645;pseudo=true PYKB01000509.1 Protein Homology CDS 7907 8884 . - 0 ID=cds-C9F09_06645;Parent=gene-C9F09_06645;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=C9F09_06645;product=invasin;pseudo=true;transl_table=11 ##sequence-region PYKB01000967.1 1 2135 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000967.1 Genbank region 1 2135 . + . ID=PYKB01000967.1:1..2135;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000967.1 Genbank pseudogene 23 259 . - . ID=gene-C9F09_16005;Name=C9F09_16005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16005;pseudo=true PYKB01000967.1 Protein Homology CDS 23 259 . - 0 ID=cds-C9F09_16005;Parent=gene-C9F09_16005;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455877.1;locus_tag=C9F09_16005;product=lactate oxidase;pseudo=true;transl_table=11 PYKB01000967.1 Genbank gene 271 846 . - . ID=gene-C9F09_16010;Name=C9F09_16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16010 PYKB01000967.1 Protein Homology CDS 271 846 . - 0 ID=cds-TGC88961.1;Parent=gene-C9F09_16010;Dbxref=NCBI_GP:TGC88961.1;Name=TGC88961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455876.1;locus_tag=C9F09_16010;product=polyisoprenoid-binding protein;protein_id=TGC88961.1;transl_table=11 PYKB01000967.1 Genbank gene 1042 2135 . - . ID=gene-C9F09_16015;Name=mdoD;end_range=2135,.;gbkey=Gene;gene=mdoD;gene_biotype=protein_coding;gene_synonym=opgD;locus_tag=C9F09_16015;partial=true PYKB01000967.1 Protein Homology CDS 1042 2135 . - 2 ID=cds-TGC88962.1;Parent=gene-C9F09_16015;Dbxref=NCBI_GP:TGC88962.1;Name=TGC88962.1;Note=involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans;end_range=2135,.;gbkey=CDS;gene=mdoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455875.1;locus_tag=C9F09_16015;partial=true;product=glucan biosynthesis protein D;protein_id=TGC88962.1;transl_table=11 ##sequence-region PYKB01000311.1 1 2129 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000311.1 Genbank region 1 2129 . + . ID=PYKB01000311.1:1..2129;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000311.1 Genbank gene 1 460 . + . ID=gene-C9F09_03485;Name=C9F09_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03485;partial=true;start_range=.,1 PYKB01000311.1 Protein Homology CDS 1 460 . + 1 ID=cds-TGD01309.1;Parent=gene-C9F09_03485;Dbxref=NCBI_GP:TGD01309.1;Name=TGD01309.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=C9F09_03485;partial=true;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=TGD01309.1;start_range=.,1;transl_table=11 PYKB01000311.1 Genbank gene 473 1324 . + . ID=gene-C9F09_03490;Name=C9F09_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03490 PYKB01000311.1 Protein Homology CDS 473 1324 . + 0 ID=cds-TGD01310.1;Parent=gene-C9F09_03490;Dbxref=NCBI_GP:TGD01310.1;Name=TGD01310.1;Note=hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456338.3;locus_tag=C9F09_03490;product=PTS mannose transporter subunit IID;protein_id=TGD01310.1;transl_table=11 PYKB01000311.1 Genbank gene 1383 1841 . + . ID=gene-C9F09_03495;Name=C9F09_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03495 PYKB01000311.1 Protein Homology CDS 1383 1841 . + 0 ID=cds-TGD01311.1;Parent=gene-C9F09_03495;Dbxref=NCBI_GP:TGD01311.1;Name=TGD01311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460789.1;locus_tag=C9F09_03495;product=DUF986 domain-containing protein;protein_id=TGD01311.1;transl_table=11 ##sequence-region PYKB01001410.1 1 2127 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001410.1 Genbank region 1 2127 . + . ID=PYKB01001410.1:1..2127;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001410.1 Genbank pseudogene 39 800 . + . ID=gene-C9F09_24225;Name=C9F09_24225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_24225;pseudo=true PYKB01001410.1 Protein Homology CDS 39 800 . + 0 ID=cds-C9F09_24225;Parent=gene-C9F09_24225;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454926.1;locus_tag=C9F09_24225;product=RNA ligase RtcB family protein;pseudo=true;transl_table=11 PYKB01001410.1 Genbank gene 797 1411 . + . ID=gene-C9F09_24230;Name=C9F09_24230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24230 PYKB01001410.1 Protein Homology CDS 797 1411 . + 0 ID=cds-TGC79251.1;Parent=gene-C9F09_24230;Dbxref=NCBI_GP:TGC79251.1;Name=TGC79251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454927.1;locus_tag=C9F09_24230;product=peptide chain release factor H;protein_id=TGC79251.1;transl_table=11 PYKB01001410.1 Genbank gene 1567 2127 . - . ID=gene-C9F09_24235;Name=C9F09_24235;end_range=2127,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24235;partial=true PYKB01001410.1 Protein Homology CDS 1567 2127 . - 0 ID=cds-TGC79252.1;Parent=gene-C9F09_24235;Dbxref=NCBI_GP:TGC79252.1;Name=TGC79252.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;end_range=2127,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008783788.1;locus_tag=C9F09_24235;partial=true;product=cytosol nonspecific dipeptidase;protein_id=TGC79252.1;transl_table=11 ##sequence-region PYKB01001567.1 1 2126 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001567.1 Genbank region 1 2126 . + . ID=PYKB01001567.1:1..2126;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001567.1 Genbank gene 1 290 . + . ID=gene-C9F09_27345;Name=C9F09_27345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27345;partial=true;start_range=.,1 PYKB01001567.1 Protein Homology CDS 1 290 . + 2 ID=cds-TGC75620.1;Parent=gene-C9F09_27345;Dbxref=NCBI_GP:TGC75620.1;Name=TGC75620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=C9F09_27345;partial=true;product=hypothetical protein;protein_id=TGC75620.1;start_range=.,1;transl_table=11 PYKB01001567.1 Genbank gene 283 1236 . + . ID=gene-C9F09_27350;Name=C9F09_27350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27350 PYKB01001567.1 Protein Homology CDS 283 1236 . + 0 ID=cds-TGC75621.1;Parent=gene-C9F09_27350;Dbxref=NCBI_GP:TGC75621.1;Name=TGC75621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=C9F09_27350;product=transketolase;protein_id=TGC75621.1;transl_table=11 PYKB01001567.1 Genbank gene 1285 2126 . - . ID=gene-C9F09_27355;Name=C9F09_27355;end_range=2126,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27355;partial=true PYKB01001567.1 Protein Homology CDS 1285 2126 . - 2 ID=cds-TGC75622.1;Parent=gene-C9F09_27355;Dbxref=NCBI_GP:TGC75622.1;Name=TGC75622.1;end_range=2126,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456881.1;locus_tag=C9F09_27355;partial=true;product=putative basic amino acid antiporter YfcC;protein_id=TGC75622.1;transl_table=11 ##sequence-region PYKB01001202.1 1 2126 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001202.1 Genbank region 1 2126 . + . ID=PYKB01001202.1:1..2126;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001202.1 Genbank gene 1 2126 . + . ID=gene-C9F09_20465;Name=bcsA;end_range=2126,.;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=C9F09_20465;partial=true;start_range=.,1 PYKB01001202.1 Protein Homology CDS 1 2126 . + 0 ID=cds-TGC83485.1;Parent=gene-C9F09_20465;Dbxref=NCBI_GP:TGC83485.1;Name=TGC83485.1;Note=polymerizes uridine 5'-diphosphate glucose to cellulose%3B acts with BcsB%2C BcsZ and BcsC in cellulose biosynthesis;end_range=2126,.;gbkey=CDS;gene=bcsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458301.1;locus_tag=C9F09_20465;partial=true;product=UDP-forming cellulose synthase catalytic subunit;protein_id=TGC83485.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000231.1 1 2125 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000231.1 Genbank region 1 2125 . + . ID=PYKB01000231.1:1..2125;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000231.1 Genbank gene 1 268 . + . ID=gene-C9F09_02480;Name=C9F09_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02480;partial=true;start_range=.,1 PYKB01000231.1 Protein Homology CDS 1 268 . + 1 ID=cds-TGD03068.1;Parent=gene-C9F09_02480;Dbxref=NCBI_GP:TGD03068.1;Name=TGD03068.1;Note=in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA%3B cells lacking this function can grow%2C but are outcompeted by wild-type%3B SAM-dependent m(3)U1498 methyltransferase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462010.3;locus_tag=C9F09_02480;partial=true;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=TGD03068.1;start_range=.,1;transl_table=11 PYKB01000231.1 Genbank gene 288 1235 . + . ID=gene-C9F09_02485;Name=C9F09_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02485 PYKB01000231.1 Protein Homology CDS 288 1235 . + 0 ID=cds-TGD03069.1;Parent=gene-C9F09_02485;Dbxref=NCBI_GP:TGD03069.1;Name=TGD03069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=C9F09_02485;product=glutathione synthase;protein_id=TGD03069.1;transl_table=11 PYKB01000231.1 Genbank gene 1451 2014 . + . ID=gene-C9F09_02490;Name=C9F09_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02490 PYKB01000231.1 Protein Homology CDS 1451 2014 . + 0 ID=cds-TGD03070.1;Parent=gene-C9F09_02490;Dbxref=NCBI_GP:TGD03070.1;Name=TGD03070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462012.1;locus_tag=C9F09_02490;product=YqgE/AlgH family protein;protein_id=TGD03070.1;transl_table=11 ##sequence-region PYKB01001039.1 1 2123 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001039.1 Genbank region 1 2123 . + . ID=PYKB01001039.1:1..2123;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001039.1 Genbank pseudogene 60 134 . - . ID=gene-C9F09_17435;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=pseudogene;locus_tag=C9F09_17435;pseudo=true PYKB01001039.1 Protein Homology CDS 60 134 . - 0 ID=cds-C9F09_17435;Parent=gene-C9F09_17435;Note=similar to periplasmic-binding component of ABC transporters%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=glnH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=C9F09_17435;product=glutamine ABC transporter substrate-binding protein GlnH;pseudo=true;transl_table=11 PYKB01001039.1 Genbank gene 611 1114 . - . ID=gene-C9F09_17440;Name=C9F09_17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17440 PYKB01001039.1 Protein Homology CDS 611 1114 . - 0 ID=cds-TGC87365.1;Parent=gene-C9F09_17440;Dbxref=NCBI_GP:TGC87365.1;Name=TGC87365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455366.1;locus_tag=C9F09_17440;product=DNA starvation/stationary phase protection protein;protein_id=TGC87365.1;transl_table=11 PYKB01001039.1 Genbank gene 1417 2123 . - . ID=gene-C9F09_17445;Name=C9F09_17445;end_range=2123,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17445;partial=true PYKB01001039.1 Protein Homology CDS 1417 2123 . - 2 ID=cds-TGC87366.1;Parent=gene-C9F09_17445;Dbxref=NCBI_GP:TGC87366.1;Name=TGC87366.1;end_range=2123,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=C9F09_17445;partial=true;product=threonine/homoserine exporter RhtA;protein_id=TGC87366.1;transl_table=11 ##sequence-region PYKB01000930.1 1 2120 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000930.1 Genbank region 1 2120 . + . ID=PYKB01000930.1:1..2120;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000930.1 Genbank gene 1 226 . + . ID=gene-C9F09_15340;Name=C9F09_15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15340;partial=true;start_range=.,1 PYKB01000930.1 Protein Homology CDS 1 226 . + 1 ID=cds-TGC89688.1;Parent=gene-C9F09_15340;Dbxref=NCBI_GP:TGC89688.1;Name=TGC89688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=C9F09_15340;partial=true;product=DNA-directed RNA polymerase subunit alpha;protein_id=TGC89688.1;start_range=.,1;transl_table=11 PYKB01000930.1 Genbank gene 267 650 . + . ID=gene-C9F09_15345;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=C9F09_15345 PYKB01000930.1 Protein Homology CDS 267 650 . + 0 ID=cds-TGC89689.1;Parent=gene-C9F09_15345;Dbxref=NCBI_GP:TGC89689.1;Name=TGC89689.1;gbkey=CDS;gene=rplQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458486.1;locus_tag=C9F09_15345;product=50S ribosomal protein L17;protein_id=TGC89689.1;transl_table=11 PYKB01000930.1 Genbank gene 758 1126 . + . ID=gene-C9F09_15350;Name=C9F09_15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15350 PYKB01000930.1 Protein Homology CDS 758 1126 . + 0 ID=cds-TGC89690.1;Parent=gene-C9F09_15350;Dbxref=NCBI_GP:TGC89690.1;Name=TGC89690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=C9F09_15350;product=DUF1992 domain-containing protein;protein_id=TGC89690.1;transl_table=11 PYKB01000930.1 Genbank gene 1137 1562 . + . ID=gene-C9F09_15355;Name=C9F09_15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15355 PYKB01000930.1 Protein Homology CDS 1137 1562 . + 0 ID=cds-TGC89691.1;Parent=gene-C9F09_15355;Dbxref=NCBI_GP:TGC89691.1;Name=TGC89691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=C9F09_15355;product=Zn(2+)-responsive transcriptional regulator;protein_id=TGC89691.1;transl_table=11 PYKB01000930.1 Genbank gene 1620 1889 . + . ID=gene-C9F09_15360;Name=C9F09_15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15360 PYKB01000930.1 Protein Homology CDS 1620 1889 . + 0 ID=cds-TGC89692.1;Parent=gene-C9F09_15360;Dbxref=NCBI_GP:TGC89692.1;Name=TGC89692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462315.1;locus_tag=C9F09_15360;product=ribosome alternative rescue factor ArfA;protein_id=TGC89692.1;transl_table=11 PYKB01000930.1 Genbank gene 1825 2120 . - . ID=gene-C9F09_15365;Name=mscL;end_range=2120,.;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=C9F09_15365;partial=true PYKB01000930.1 Protein Homology CDS 1825 2120 . - 2 ID=cds-TGC89693.1;Parent=gene-C9F09_15365;Dbxref=NCBI_GP:TGC89693.1;Name=TGC89693.1;end_range=2120,.;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458489.1;locus_tag=C9F09_15365;partial=true;product=large conductance mechanosensitive channel protein MscL;protein_id=TGC89693.1;transl_table=11 ##sequence-region PYKB01001603.1 1 2115 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001603.1 Genbank region 1 2115 . + . ID=PYKB01001603.1:1..2115;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001603.1 Genbank gene 1 2115 . - . ID=gene-C9F09_28125;Name=carB;end_range=2115,.;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=C9F09_28125;partial=true;start_range=.,1 PYKB01001603.1 Protein Homology CDS 1 2115 . - 2 ID=cds-TGC74777.1;Parent=gene-C9F09_28125;Dbxref=NCBI_GP:TGC74777.1;Name=TGC74777.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;end_range=2115,.;gbkey=CDS;gene=carB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=C9F09_28125;partial=true;product=carbamoyl phosphate synthase large subunit;protein_id=TGC74777.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000102.1 1 2114 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000102.1 Genbank region 1 2114 . + . ID=PYKB01000102.1:1..2114;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000102.1 Genbank gene 1 309 . - . ID=gene-C9F09_01165;Name=C9F09_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01165;partial=true;start_range=.,1 PYKB01000102.1 Protein Homology CDS 1 309 . - 0 ID=cds-TGD05426.1;Parent=gene-C9F09_01165;Dbxref=NCBI_GP:TGD05426.1;Name=TGD05426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454777.1;locus_tag=C9F09_01165;partial=true;product=DeoR family transcriptional regulator;protein_id=TGD05426.1;start_range=.,1;transl_table=11 PYKB01000102.1 Genbank gene 319 1302 . - . ID=gene-C9F09_01170;Name=C9F09_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01170 PYKB01000102.1 Protein Homology CDS 319 1302 . - 0 ID=cds-TGD05427.1;Parent=gene-C9F09_01170;Dbxref=NCBI_GP:TGD05427.1;Name=TGD05427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=C9F09_01170;product=4-hydroxythreonine-4-phosphate dehydrogenase 2;protein_id=TGD05427.1;transl_table=11 PYKB01000102.1 Genbank gene 1292 2114 . - . ID=gene-C9F09_01175;Name=C9F09_01175;end_range=2114,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01175;partial=true PYKB01000102.1 Protein Homology CDS 1292 2114 . - 1 ID=cds-TGD05428.1;Parent=gene-C9F09_01175;Dbxref=NCBI_GP:TGD05428.1;Name=TGD05428.1;end_range=2114,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=C9F09_01175;partial=true;product=D-threonate kinase;protein_id=TGD05428.1;transl_table=11 ##sequence-region PYKB01000165.1 1 8907 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000165.1 Genbank region 1 8907 . + . ID=PYKB01000165.1:1..8907;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000165.1 Genbank gene 1 1214 . + . ID=gene-C9F09_01835;Name=C9F09_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01835;partial=true;start_range=.,1 PYKB01000165.1 Protein Homology CDS 1 1214 . + 2 ID=cds-TGD04157.1;Parent=gene-C9F09_01835;Dbxref=NCBI_GP:TGD04157.1;Name=TGD04157.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=C9F09_01835;partial=true;product=transketolase;protein_id=TGD04157.1;start_range=.,1;transl_table=11 PYKB01000165.1 Genbank gene 1258 1914 . - . ID=gene-C9F09_01840;Name=C9F09_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01840 PYKB01000165.1 Protein Homology CDS 1258 1914 . - 0 ID=cds-TGD04158.1;Parent=gene-C9F09_01840;Dbxref=NCBI_GP:TGD04158.1;Name=TGD04158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457474.1;locus_tag=C9F09_01840;product=ABC transporter ATP-binding protein;protein_id=TGD04158.1;transl_table=11 PYKB01000165.1 Genbank gene 1908 2591 . - . ID=gene-C9F09_01845;Name=C9F09_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01845 PYKB01000165.1 Protein Homology CDS 1908 2591 . - 0 ID=cds-TGD04159.1;Parent=gene-C9F09_01845;Dbxref=NCBI_GP:TGD04159.1;Name=TGD04159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457473.1;locus_tag=C9F09_01845;product=cobalt ABC transporter ATP-binding protein;protein_id=TGD04159.1;transl_table=11 PYKB01000165.1 Genbank gene 2573 3280 . - . ID=gene-C9F09_01850;Name=C9F09_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01850 PYKB01000165.1 Protein Homology CDS 2573 3280 . - 0 ID=cds-TGD04160.1;Parent=gene-C9F09_01850;Dbxref=NCBI_GP:TGD04160.1;Name=TGD04160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=C9F09_01850;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=TGD04160.1;transl_table=11 PYKB01000165.1 Genbank gene 3281 3859 . - . ID=gene-C9F09_01855;Name=C9F09_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01855 PYKB01000165.1 Protein Homology CDS 3281 3859 . - 0 ID=cds-TGD04161.1;Parent=gene-C9F09_01855;Dbxref=NCBI_GP:TGD04161.1;Name=TGD04161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457471.1;locus_tag=C9F09_01855;product=ECF transporter S component;protein_id=TGD04161.1;transl_table=11 PYKB01000165.1 Genbank gene 3885 4310 . - . ID=gene-C9F09_01860;Name=C9F09_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01860 PYKB01000165.1 Protein Homology CDS 3885 4310 . - 0 ID=cds-TGD04162.1;Parent=gene-C9F09_01860;Dbxref=NCBI_GP:TGD04162.1;Name=TGD04162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457470.1;locus_tag=C9F09_01860;product=DUF296 domain-containing protein;protein_id=TGD04162.1;transl_table=11 PYKB01000165.1 Genbank gene 4313 4513 . - . ID=gene-C9F09_01865;Name=C9F09_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01865 PYKB01000165.1 Protein Homology CDS 4313 4513 . - 0 ID=cds-TGD04163.1;Parent=gene-C9F09_01865;Dbxref=NCBI_GP:TGD04163.1;Name=TGD04163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219219.1;locus_tag=C9F09_01865;product=hypothetical protein;protein_id=TGD04163.1;transl_table=11 PYKB01000165.1 Genbank gene 4684 5730 . + . ID=gene-C9F09_01870;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=C9F09_01870 PYKB01000165.1 Protein Homology CDS 4684 5730 . + 0 ID=cds-TGD04164.1;Parent=gene-C9F09_01870;Dbxref=NCBI_GP:TGD04164.1;Name=TGD04164.1;Note=required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457469.1;locus_tag=C9F09_01870;product=erythrose-4-phosphate dehydrogenase;protein_id=TGD04164.1;transl_table=11 PYKB01000165.1 Genbank gene 5752 6915 . + . ID=gene-C9F09_01875;Name=C9F09_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01875 PYKB01000165.1 Protein Homology CDS 5752 6915 . + 0 ID=cds-TGD04165.1;Parent=gene-C9F09_01875;Dbxref=NCBI_GP:TGD04165.1;Name=TGD04165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457468.1;locus_tag=C9F09_01875;product=phosphoglycerate kinase;protein_id=TGD04165.1;transl_table=11 PYKB01000165.1 Genbank gene 7017 8096 . + . ID=gene-C9F09_01880;Name=C9F09_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01880 PYKB01000165.1 Protein Homology CDS 7017 8096 . + 0 ID=cds-TGD04166.1;Parent=gene-C9F09_01880;Dbxref=NCBI_GP:TGD04166.1;Name=TGD04166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=C9F09_01880;product=class II fructose-bisphosphate aldolase;protein_id=TGD04166.1;transl_table=11 PYKB01000165.1 Genbank gene 8323 8907 . + . ID=gene-C9F09_01885;Name=C9F09_01885;end_range=8907,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01885;partial=true PYKB01000165.1 Protein Homology CDS 8323 8907 . + 0 ID=cds-TGD04167.1;Parent=gene-C9F09_01885;Dbxref=NCBI_GP:TGD04167.1;Name=TGD04167.1;Note=participates in the regulation of osmotic pressure changes within the cel;end_range=8907,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457465.1;locus_tag=C9F09_01885;partial=true;product=mechanosensitive ion channel protein MscS;protein_id=TGD04167.1;transl_table=11 ##sequence-region PYKB01001607.1 1 2114 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001607.1 Genbank region 1 2114 . + . ID=PYKB01001607.1:1..2114;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001607.1 Genbank pseudogene 49 243 . + . ID=gene-C9F09_28180;Name=C9F09_28180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28180;pseudo=true PYKB01001607.1 Protein Homology CDS 49 243 . + 0 ID=cds-C9F09_28180;Parent=gene-C9F09_28180;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458220.1;locus_tag=C9F09_28180;product=glycosyltransferase;pseudo=true;transl_table=11 PYKB01001607.1 Genbank gene 230 1192 . - . ID=gene-C9F09_28185;Name=C9F09_28185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28185 PYKB01001607.1 Protein Homology CDS 230 1192 . - 0 ID=cds-TGC74705.1;Parent=gene-C9F09_28185;Dbxref=NCBI_GP:TGC74705.1;Name=TGC74705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=C9F09_28185;product=hypothetical protein;protein_id=TGC74705.1;transl_table=11 PYKB01001607.1 Genbank pseudogene 1196 2114 . - . ID=gene-C9F09_28190;Name=C9F09_28190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28190;pseudo=true PYKB01001607.1 Protein Homology CDS 1196 2114 . - 1 ID=cds-C9F09_28190;Parent=gene-C9F09_28190;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458222.1;locus_tag=C9F09_28190;product=murein hydrolase activator EnvC;pseudo=true;transl_table=11 ##sequence-region PYKB01000221.1 1 2113 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000221.1 Genbank region 1 2113 . + . ID=PYKB01000221.1:1..2113;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000221.1 Genbank gene 76 771 . - . ID=gene-C9F09_02360;Name=C9F09_02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02360 PYKB01000221.1 Protein Homology CDS 76 771 . - 0 ID=cds-TGD03287.1;Parent=gene-C9F09_02360;Dbxref=NCBI_GP:TGD03287.1;Name=TGD03287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456780.1;locus_tag=C9F09_02360;product=16S rRNA pseudouridine(516) synthase;protein_id=TGD03287.1;transl_table=11 PYKB01000221.1 Genbank gene 923 2113 . + . ID=gene-C9F09_02365;Name=C9F09_02365;end_range=2113,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02365;partial=true PYKB01000221.1 Protein Homology CDS 923 2113 . + 0 ID=cds-TGD03288.1;Parent=gene-C9F09_02365;Dbxref=NCBI_GP:TGD03288.1;Name=TGD03288.1;end_range=2113,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456781.1;locus_tag=C9F09_02365;partial=true;product=ATP-dependent helicase;protein_id=TGD03288.1;transl_table=11 ##sequence-region PYKB01000711.1 1 2111 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000711.1 Genbank region 1 2111 . + . ID=PYKB01000711.1:1..2111;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000711.1 Genbank gene 1 107 . - . ID=gene-C9F09_10855;Name=C9F09_10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10855;partial=true;start_range=.,1 PYKB01000711.1 Protein Homology CDS 1 107 . - 0 ID=cds-TGC93546.1;Parent=gene-C9F09_10855;Dbxref=NCBI_GP:TGC93546.1;Name=TGC93546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=C9F09_10855;partial=true;product=sodium:dicarboxylate symporter;protein_id=TGC93546.1;start_range=.,1;transl_table=11 PYKB01000711.1 Genbank gene 244 843 . - . ID=gene-C9F09_10860;Name=C9F09_10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10860 PYKB01000711.1 Protein Homology CDS 244 843 . - 0 ID=cds-TGC93547.1;Parent=gene-C9F09_10860;Dbxref=NCBI_GP:TGC93547.1;Name=TGC93547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=C9F09_10860;product=metal-dependent hydrolase;protein_id=TGC93547.1;transl_table=11 PYKB01000711.1 Genbank gene 981 1649 . - . ID=gene-C9F09_10865;Name=C9F09_10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10865 PYKB01000711.1 Protein Homology CDS 981 1649 . - 0 ID=cds-TGC93548.1;Parent=gene-C9F09_10865;Dbxref=NCBI_GP:TGC93548.1;Name=TGC93548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=C9F09_10865;product=hexitol phosphatase HxpB;protein_id=TGC93548.1;transl_table=11 PYKB01000711.1 Genbank gene 1798 2111 . + . ID=gene-C9F09_10870;Name=C9F09_10870;end_range=2111,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10870;partial=true PYKB01000711.1 Protein Homology CDS 1798 2111 . + 0 ID=cds-TGC93549.1;Parent=gene-C9F09_10870;Dbxref=NCBI_GP:TGC93549.1;Name=TGC93549.1;end_range=2111,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456188.1;locus_tag=C9F09_10870;partial=true;product=hypothetical protein;protein_id=TGC93549.1;transl_table=11 ##sequence-region PYKB01000458.1 1 2109 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000458.1 Genbank region 1 2109 . + . ID=PYKB01000458.1:1..2109;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000458.1 Genbank gene 93 1016 . + . ID=gene-C9F09_05730;Name=C9F09_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05730 PYKB01000458.1 Protein Homology CDS 93 1016 . + 0 ID=cds-TGC98484.1;Parent=gene-C9F09_05730;Dbxref=NCBI_GP:TGC98484.1;Name=TGC98484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457527.1;locus_tag=C9F09_05730;product=xylanase deacetylase;protein_id=TGC98484.1;transl_table=11 PYKB01000458.1 Genbank gene 1742 2109 . + . ID=gene-C9F09_05735;Name=C9F09_05735;end_range=2109,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05735;partial=true PYKB01000458.1 Protein Homology CDS 1742 2109 . + 0 ID=cds-TGC98485.1;Parent=gene-C9F09_05735;Dbxref=NCBI_GP:TGC98485.1;Name=TGC98485.1;end_range=2109,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457526.1;locus_tag=C9F09_05735;partial=true;product=type VI secretion system tube protein Hcp;protein_id=TGC98485.1;transl_table=11 ##sequence-region PYKB01000484.1 1 2108 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000484.1 Genbank region 1 2108 . + . ID=PYKB01000484.1:1..2108;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000484.1 Genbank pseudogene 21 2108 . + . ID=gene-C9F09_06070;Name=C9F09_06070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_06070;pseudo=true PYKB01000484.1 Protein Homology CDS 21 2108 . + 0 ID=cds-C9F09_06070;Parent=gene-C9F09_06070;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199243.1;locus_tag=C9F09_06070;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000596.1 1 2105 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000596.1 Genbank region 1 2105 . + . ID=PYKB01000596.1:1..2105;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000596.1 Genbank gene 1 432 . - . ID=gene-C9F09_08685;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=C9F09_08685;partial=true;start_range=.,1 PYKB01000596.1 Protein Homology CDS 1 432 . - 0 ID=cds-TGC95443.1;Parent=gene-C9F09_08685;Dbxref=NCBI_GP:TGC95443.1;Name=TGC95443.1;gbkey=CDS;gene=rraA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=C9F09_08685;partial=true;product=ribonuclease E activity regulator RraA;protein_id=TGC95443.1;start_range=.,1;transl_table=11 PYKB01000596.1 Genbank gene 525 1454 . - . ID=gene-C9F09_08690;Name=C9F09_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08690 PYKB01000596.1 Protein Homology CDS 525 1454 . - 0 ID=cds-TGC95444.1;Parent=gene-C9F09_08690;Dbxref=NCBI_GP:TGC95444.1;Name=TGC95444.1;Note=catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=C9F09_08690;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=TGC95444.1;transl_table=11 PYKB01000596.1 Genbank pseudogene 1521 2105 . - . ID=gene-C9F09_08695;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=pseudogene;locus_tag=C9F09_08695;pseudo=true PYKB01000596.1 Protein Homology CDS 1521 2105 . - 0 ID=cds-C9F09_08695;Parent=gene-C9F09_08695;Note=heat shock protein involved in degradation of misfolded proteins%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=hslU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=C9F09_08695;product=HslU--HslV peptidase ATPase subunit;pseudo=true;transl_table=11 ##sequence-region PYKB01000794.1 1 2098 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000794.1 Genbank region 1 2098 . + . ID=PYKB01000794.1:1..2098;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000794.1 Genbank gene 131 316 . + . ID=gene-C9F09_12330;Name=C9F09_12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12330 PYKB01000794.1 Protein Homology CDS 131 316 . + 0 ID=cds-TGC92247.1;Parent=gene-C9F09_12330;Dbxref=NCBI_GP:TGC92247.1;Name=TGC92247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001587223.1;locus_tag=C9F09_12330;product=copper-binding protein;protein_id=TGC92247.1;transl_table=11 PYKB01000794.1 Genbank gene 449 1690 . + . ID=gene-C9F09_12335;Name=C9F09_12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12335 PYKB01000794.1 Protein Homology CDS 449 1690 . + 0 ID=cds-TGC92245.1;Parent=gene-C9F09_12335;Dbxref=NCBI_GP:TGC92245.1;Name=TGC92245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=C9F09_12335;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=TGC92245.1;transl_table=11 PYKB01000794.1 Genbank gene 1724 1951 . - . ID=gene-C9F09_12340;Name=C9F09_12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12340 PYKB01000794.1 Protein Homology CDS 1724 1951 . - 0 ID=cds-TGC92246.1;Parent=gene-C9F09_12340;Dbxref=NCBI_GP:TGC92246.1;Name=TGC92246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=C9F09_12340;product=hypothetical protein;protein_id=TGC92246.1;transl_table=11 PYKB01000794.1 Genbank gene 1972 2098 . - . ID=gene-C9F09_12345;Name=C9F09_12345;end_range=2098,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12345;partial=true PYKB01000794.1 Protein Homology CDS 1972 2098 . - 1 ID=cds-TGC92248.1;Parent=gene-C9F09_12345;Dbxref=NCBI_GP:TGC92248.1;Name=TGC92248.1;end_range=2098,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415524.1;locus_tag=C9F09_12345;partial=true;product=NAD(P)H:quinone oxidoreductase;protein_id=TGC92248.1;transl_table=11 ##sequence-region PYKB01000710.1 1 2095 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000710.1 Genbank region 1 2095 . + . ID=PYKB01000710.1:1..2095;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000710.1 Genbank gene 309 2095 . + . ID=gene-C9F09_10850;Name=C9F09_10850;end_range=2095,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10850;partial=true PYKB01000710.1 Protein Homology CDS 309 2095 . + 0 ID=cds-TGC93557.1;Parent=gene-C9F09_10850;Dbxref=NCBI_GP:TGC93557.1;Name=TGC93557.1;end_range=2095,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=C9F09_10850;partial=true;product=molecular chaperone DnaK;protein_id=TGC93557.1;transl_table=11 ##sequence-region PYKB01001359.1 1 2089 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001359.1 Genbank region 1 2089 . + . ID=PYKB01001359.1:1..2089;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001359.1 Genbank gene 1 1195 . - . ID=gene-C9F09_23355;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=C9F09_23355;partial=true;start_range=.,1 PYKB01001359.1 Protein Homology CDS 1 1195 . - 0 ID=cds-TGC80373.1;Parent=gene-C9F09_23355;Dbxref=NCBI_GP:TGC80373.1;Name=TGC80373.1;gbkey=CDS;gene=hrpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459194.1;locus_tag=C9F09_23355;partial=true;product=ATP-dependent helicase HrpB;protein_id=TGC80373.1;start_range=.,1;transl_table=11 PYKB01001359.1 Genbank gene 1223 1753 . + . ID=gene-C9F09_23360;Name=C9F09_23360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23360 PYKB01001359.1 Protein Homology CDS 1223 1753 . + 0 ID=cds-TGC80374.1;Parent=gene-C9F09_23360;Dbxref=NCBI_GP:TGC80374.1;Name=TGC80374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=C9F09_23360;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=TGC80374.1;transl_table=11 PYKB01001359.1 Genbank gene 1770 2089 . + . ID=gene-C9F09_23365;Name=sfsA;end_range=2089,.;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=C9F09_23365;partial=true PYKB01001359.1 Protein Homology CDS 1770 2089 . + 0 ID=cds-TGC80375.1;Parent=gene-C9F09_23365;Dbxref=NCBI_GP:TGC80375.1;Name=TGC80375.1;end_range=2089,.;gbkey=CDS;gene=sfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454803.1;locus_tag=C9F09_23365;partial=true;product=DNA/RNA nuclease SfsA;protein_id=TGC80375.1;transl_table=11 ##sequence-region PYKB01001613.1 1 2088 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001613.1 Genbank region 1 2088 . + . ID=PYKB01001613.1:1..2088;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001613.1 Genbank gene 1 907 . + . ID=gene-C9F09_28255;Name=C9F09_28255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28255;partial=true;start_range=.,1 PYKB01001613.1 Protein Homology CDS 1 907 . + 1 ID=cds-TGC74643.1;Parent=gene-C9F09_28255;Dbxref=NCBI_GP:TGC74643.1;Name=TGC74643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=C9F09_28255;partial=true;product=aminopeptidase;protein_id=TGC74643.1;start_range=.,1;transl_table=11 PYKB01001613.1 Genbank gene 904 1185 . + . ID=gene-C9F09_28260;Name=C9F09_28260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28260 PYKB01001613.1 Protein Homology CDS 904 1185 . + 0 ID=cds-TGC74644.1;Parent=gene-C9F09_28260;Dbxref=NCBI_GP:TGC74644.1;Name=TGC74644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455884.1;locus_tag=C9F09_28260;product=PTS sugar transporter subunit IIB;protein_id=TGC74644.1;transl_table=11 PYKB01001613.1 Genbank gene 1196 2088 . + . ID=gene-C9F09_28265;Name=C9F09_28265;end_range=2088,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28265;partial=true PYKB01001613.1 Protein Homology CDS 1196 2088 . + 0 ID=cds-TGC74645.1;Parent=gene-C9F09_28265;Dbxref=NCBI_GP:TGC74645.1;Name=TGC74645.1;end_range=2088,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=C9F09_28265;partial=true;product=hypothetical protein;protein_id=TGC74645.1;transl_table=11 ##sequence-region PYKB01000187.1 1 8891 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000187.1 Genbank region 1 8891 . + . ID=PYKB01000187.1:1..8891;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000187.1 Genbank gene 1 726 . - . ID=gene-C9F09_02075;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=C9F09_02075;partial=true;start_range=.,1 PYKB01000187.1 Protein Homology CDS 1 726 . - 0 ID=cds-TGD03821.1;Parent=gene-C9F09_02075;Dbxref=NCBI_GP:TGD03821.1;Name=TGD03821.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455250.1;locus_tag=C9F09_02075;partial=true;product=tricarballylate/proton symporter TcuC;protein_id=TGD03821.1;start_range=.,1;transl_table=11 PYKB01000187.1 Genbank gene 777 1916 . - . ID=gene-C9F09_02080;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=C9F09_02080 PYKB01000187.1 Protein Homology CDS 777 1916 . - 0 ID=cds-TGD03812.1;Parent=gene-C9F09_02080;Dbxref=NCBI_GP:TGD03812.1;Name=TGD03812.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=C9F09_02080;product=tricarballylate utilization protein TcuB;protein_id=TGD03812.1;transl_table=11 PYKB01000187.1 Genbank gene 1903 3306 . - . ID=gene-C9F09_02085;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=C9F09_02085 PYKB01000187.1 Protein Homology CDS 1903 3306 . - 0 ID=cds-TGD03813.1;Parent=gene-C9F09_02085;Dbxref=NCBI_GP:TGD03813.1;Name=TGD03813.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455252.1;locus_tag=C9F09_02085;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=TGD03813.1;transl_table=11 PYKB01000187.1 Genbank gene 3404 4330 . - . ID=gene-C9F09_02090;Name=C9F09_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02090 PYKB01000187.1 Protein Homology CDS 3404 4330 . - 0 ID=cds-TGD03814.1;Parent=gene-C9F09_02090;Dbxref=NCBI_GP:TGD03814.1;Name=TGD03814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455253.1;locus_tag=C9F09_02090;product=LysR family transcriptional regulator;protein_id=TGD03814.1;transl_table=11 PYKB01000187.1 Genbank gene 4445 4897 . - . ID=gene-C9F09_02095;Name=C9F09_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02095 PYKB01000187.1 Protein Homology CDS 4445 4897 . - 0 ID=cds-TGD03815.1;Parent=gene-C9F09_02095;Dbxref=NCBI_GP:TGD03815.1;Name=TGD03815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455254.1;locus_tag=C9F09_02095;product=ferric iron uptake transcriptional regulator;protein_id=TGD03815.1;transl_table=11 PYKB01000187.1 Genbank gene 5179 5709 . - . ID=gene-C9F09_02100;Name=C9F09_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02100 PYKB01000187.1 Protein Homology CDS 5179 5709 . - 0 ID=cds-TGD03816.1;Parent=gene-C9F09_02100;Dbxref=NCBI_GP:TGD03816.1;Name=TGD03816.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=C9F09_02100;product=flavodoxin-1;protein_id=TGD03816.1;transl_table=11 PYKB01000187.1 Genbank gene 5860 6153 . - . ID=gene-C9F09_02105;Name=C9F09_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02105 PYKB01000187.1 Protein Homology CDS 5860 6153 . - 0 ID=cds-TGD03817.1;Parent=gene-C9F09_02105;Dbxref=NCBI_GP:TGD03817.1;Name=TGD03817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455256.1;locus_tag=C9F09_02105;product=LexA regulated protein;protein_id=TGD03817.1;transl_table=11 PYKB01000187.1 Genbank gene 6287 7057 . - . ID=gene-C9F09_02110;Name=C9F09_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02110 PYKB01000187.1 Protein Homology CDS 6287 7057 . - 0 ID=cds-TGD03818.1;Parent=gene-C9F09_02110;Dbxref=NCBI_GP:TGD03818.1;Name=TGD03818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455257.1;locus_tag=C9F09_02110;product=esterase;protein_id=TGD03818.1;transl_table=11 PYKB01000187.1 Genbank gene 7242 7784 . + . ID=gene-C9F09_02115;Name=C9F09_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02115 PYKB01000187.1 Protein Homology CDS 7242 7784 . + 0 ID=cds-TGD03819.1;Parent=gene-C9F09_02115;Dbxref=NCBI_GP:TGD03819.1;Name=TGD03819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455258.1;locus_tag=C9F09_02115;product=replication initiation regulator SeqA;protein_id=TGD03819.1;transl_table=11 PYKB01000187.1 Genbank gene 7809 8891 . + . ID=gene-C9F09_02120;Name=C9F09_02120;end_range=8891,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02120;partial=true PYKB01000187.1 Protein Homology CDS 7809 8891 . + 0 ID=cds-TGD03820.1;Parent=gene-C9F09_02120;Dbxref=NCBI_GP:TGD03820.1;Name=TGD03820.1;end_range=8891,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455259.1;locus_tag=C9F09_02120;partial=true;product=alpha-D-glucose phosphate-specific phosphoglucomutase;protein_id=TGD03820.1;transl_table=11 ##sequence-region PYKB01000489.1 1 2088 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000489.1 Genbank region 1 2088 . + . ID=PYKB01000489.1:1..2088;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000489.1 Genbank gene 1 782 . + . ID=gene-C9F09_06190;Name=C9F09_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06190;partial=true;start_range=.,1 PYKB01000489.1 Protein Homology CDS 1 782 . + 2 ID=cds-TGC97849.1;Parent=gene-C9F09_06190;Dbxref=NCBI_GP:TGC97849.1;Name=TGC97849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454967.1;locus_tag=C9F09_06190;partial=true;product=porphobilinogen synthase;protein_id=TGC97849.1;start_range=.,1;transl_table=11 PYKB01000489.1 Genbank gene 886 2088 . - . ID=gene-C9F09_06195;Name=prpE;end_range=2088,.;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;gene_synonym=yahU;locus_tag=C9F09_06195;partial=true PYKB01000489.1 Protein Homology CDS 886 2088 . - 0 ID=cds-TGC97850.1;Parent=gene-C9F09_06195;Dbxref=NCBI_GP:TGC97850.1;Name=TGC97850.1;Note=catalyzes the formation of propionyl-CoA using propionate as a substrate%3B PrpE from Ralstonia solanacearum can produce acetyl-%2C propionyl-%2C butyryl- and acrylyl-coenzyme A%2C and Salmonella enterica produces propionyl- and butyryl-coenzyme A%3B not expressed in Escherichia coli when grown on propionate/minimal media%3B ATP-dependent;end_range=2088,.;gbkey=CDS;gene=prpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454966.1;locus_tag=C9F09_06195;partial=true;product=propionyl-CoA synthetase;protein_id=TGC97850.1;transl_table=11 ##sequence-region PYKB01000995.1 1 2087 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000995.1 Genbank region 1 2087 . + . ID=PYKB01000995.1:1..2087;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000995.1 Genbank gene 1 254 . - . ID=gene-C9F09_16625;Name=C9F09_16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16625;partial=true;start_range=.,1 PYKB01000995.1 Protein Homology CDS 1 254 . - 0 ID=cds-TGC88301.1;Parent=gene-C9F09_16625;Dbxref=NCBI_GP:TGC88301.1;Name=TGC88301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457192.1;locus_tag=C9F09_16625;partial=true;product=GABA permease;protein_id=TGC88301.1;start_range=.,1;transl_table=11 PYKB01000995.1 Genbank gene 384 1667 . - . ID=gene-C9F09_16630;Name=C9F09_16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16630 PYKB01000995.1 Protein Homology CDS 384 1667 . - 0 ID=cds-TGC88302.1;Parent=gene-C9F09_16630;Dbxref=NCBI_GP:TGC88302.1;Name=TGC88302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=C9F09_16630;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=TGC88302.1;transl_table=11 PYKB01000995.1 Genbank gene 1682 2087 . - . ID=gene-C9F09_16635;Name=C9F09_16635;end_range=2087,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16635;partial=true PYKB01000995.1 Protein Homology CDS 1682 2087 . - 1 ID=cds-TGC88303.1;Parent=gene-C9F09_16635;Dbxref=NCBI_GP:TGC88303.1;Name=TGC88303.1;end_range=2087,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457190.1;locus_tag=C9F09_16635;partial=true;product=succinate-semialdehyde dehydrogenase (NADP(+));protein_id=TGC88303.1;transl_table=11 ##sequence-region PYKB01001504.1 1 2083 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001504.1 Genbank region 1 2083 . + . ID=PYKB01001504.1:1..2083;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001504.1 Genbank gene 1 1210 . + . ID=gene-C9F09_26110;Name=C9F09_26110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26110;partial=true;start_range=.,1 PYKB01001504.1 Protein Homology CDS 1 1210 . + 1 ID=cds-TGC77208.1;Parent=gene-C9F09_26110;Dbxref=NCBI_GP:TGC77208.1;Name=TGC77208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456696.1;locus_tag=C9F09_26110;partial=true;product=U32 family peptidase;protein_id=TGC77208.1;start_range=.,1;transl_table=11 PYKB01001504.1 Genbank gene 1662 2083 . + . ID=gene-C9F09_26115;Name=C9F09_26115;end_range=2083,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26115;partial=true PYKB01001504.1 Protein Homology CDS 1662 2083 . + 0 ID=cds-TGC77209.1;Parent=gene-C9F09_26115;Dbxref=NCBI_GP:TGC77209.1;Name=TGC77209.1;end_range=2083,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=C9F09_26115;partial=true;product=non-LEE encoded effector protein NleB;protein_id=TGC77209.1;transl_table=11 ##sequence-region PYKB01001266.1 1 2082 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001266.1 Genbank region 1 2082 . + . ID=PYKB01001266.1:1..2082;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001266.1 Genbank pseudogene 1 385 . + . ID=gene-C9F09_21630;Name=C9F09_21630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21630;pseudo=true PYKB01001266.1 Protein Homology CDS 1 385 . + 1 ID=cds-C9F09_21630;Parent=gene-C9F09_21630;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455990.1;locus_tag=C9F09_21630;product=dethiobiotin synthase;pseudo=true;transl_table=11 PYKB01001266.1 Genbank gene 341 1630 . - . ID=gene-C9F09_21635;Name=C9F09_21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21635 PYKB01001266.1 Protein Homology CDS 341 1630 . - 0 ID=cds-TGC82242.1;Parent=gene-C9F09_21635;Dbxref=NCBI_GP:TGC82242.1;Name=TGC82242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=C9F09_21635;product=voltage-gated ClC-type chloride channel ClcB;protein_id=TGC82242.1;transl_table=11 PYKB01001266.1 Genbank gene 1766 2082 . - . ID=gene-C9F09_21640;Name=osmV;end_range=2082,.;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=C9F09_21640;partial=true PYKB01001266.1 Protein Homology CDS 1766 2082 . - 2 ID=cds-TGC82243.1;Parent=gene-C9F09_21640;Dbxref=NCBI_GP:TGC82243.1;Name=TGC82243.1;end_range=2082,.;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=C9F09_21640;partial=true;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=TGC82243.1;transl_table=11 ##sequence-region PYKB01000923.1 1 2079 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000923.1 Genbank region 1 2079 . + . ID=PYKB01000923.1:1..2079;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000923.1 Genbank gene 1 893 . + . ID=gene-C9F09_15200;Name=C9F09_15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15200;partial=true;start_range=.,1 PYKB01000923.1 Protein Homology CDS 1 893 . + 2 ID=cds-TGC89809.1;Parent=gene-C9F09_15200;Dbxref=NCBI_GP:TGC89809.1;Name=TGC89809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=C9F09_15200;partial=true;product=isocitrate lyase;protein_id=TGC89809.1;start_range=.,1;transl_table=11 PYKB01000923.1 Genbank gene 995 2079 . + . ID=gene-C9F09_15205;Name=C9F09_15205;end_range=2079,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15205;partial=true PYKB01000923.1 Protein Homology CDS 995 2079 . + 0 ID=cds-TGC89810.1;Parent=gene-C9F09_15205;Dbxref=NCBI_GP:TGC89810.1;Name=TGC89810.1;end_range=2079,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=C9F09_15205;partial=true;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=TGC89810.1;transl_table=11 ##sequence-region PYKB01001099.1 1 2077 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001099.1 Genbank region 1 2077 . + . ID=PYKB01001099.1:1..2077;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001099.1 Genbank gene 1 114 . - . ID=gene-C9F09_18415;Name=C9F09_18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18415;partial=true;start_range=.,1 PYKB01001099.1 Protein Homology CDS 1 114 . - 0 ID=cds-TGC85935.1;Parent=gene-C9F09_18415;Dbxref=NCBI_GP:TGC85935.1;Name=TGC85935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007668770.1;locus_tag=C9F09_18415;partial=true;product=hypothetical protein;protein_id=TGC85935.1;start_range=.,1;transl_table=11 PYKB01001099.1 Genbank gene 174 623 . - . ID=gene-C9F09_18420;Name=C9F09_18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18420 PYKB01001099.1 Protein Homology CDS 174 623 . - 0 ID=cds-TGC85933.1;Parent=gene-C9F09_18420;Dbxref=NCBI_GP:TGC85933.1;Name=TGC85933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033736.1;locus_tag=C9F09_18420;product=hypothetical protein;protein_id=TGC85933.1;transl_table=11 PYKB01001099.1 Genbank gene 640 2016 . - . ID=gene-C9F09_18425;Name=C9F09_18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18425 PYKB01001099.1 Protein Homology CDS 640 2016 . - 0 ID=cds-TGC85934.1;Parent=gene-C9F09_18425;Dbxref=NCBI_GP:TGC85934.1;Name=TGC85934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004991141.1;locus_tag=C9F09_18425;product=phage tail tape measure protein;protein_id=TGC85934.1;transl_table=11 ##sequence-region PYKB01000799.1 1 2074 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000799.1 Genbank region 1 2074 . + . ID=PYKB01000799.1:1..2074;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000799.1 Genbank pseudogene 1 580 . + . ID=gene-C9F09_12420;Name=C9F09_12420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12420;pseudo=true PYKB01000799.1 Protein Homology CDS 1 580 . + 1 ID=cds-C9F09_12420;Parent=gene-C9F09_12420;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458428.1;locus_tag=C9F09_12420;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000799.1 Genbank gene 577 903 . + . ID=gene-C9F09_12425;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=C9F09_12425 PYKB01000799.1 Protein Homology CDS 577 903 . + 0 ID=cds-TGC92179.1;Parent=gene-C9F09_12425;Dbxref=NCBI_GP:TGC92179.1;Name=TGC92179.1;Note=involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458427.1;locus_tag=C9F09_12425;product=nitrite reductase small subunit;protein_id=TGC92179.1;transl_table=11 PYKB01000799.1 Genbank gene 1087 1896 . + . ID=gene-C9F09_12430;Name=C9F09_12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12430 PYKB01000799.1 Protein Homology CDS 1087 1896 . + 0 ID=cds-TGC92180.1;Parent=gene-C9F09_12430;Dbxref=NCBI_GP:TGC92180.1;Name=TGC92180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458426.1;locus_tag=C9F09_12430;product=nitrite transporter NirC;protein_id=TGC92180.1;transl_table=11 PYKB01000799.1 Genbank pseudogene 1908 2048 . + . ID=gene-C9F09_12435;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=pseudogene;locus_tag=C9F09_12435;pseudo=true PYKB01000799.1 Protein Homology CDS 1908 2048 . + 0 ID=cds-C9F09_12435;Parent=gene-C9F09_12435;Note=multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=cysG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458425.1;locus_tag=C9F09_12435;product=siroheme synthase;pseudo=true;transl_table=11 ##sequence-region PYKB01001394.1 1 2071 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001394.1 Genbank region 1 2071 . + . ID=PYKB01001394.1:1..2071;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001394.1 Genbank pseudogene 197 2071 . + . ID=gene-C9F09_23955;Name=C9F09_23955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23955;pseudo=true PYKB01001394.1 Protein Homology CDS 197 2071 . + 0 ID=cds-C9F09_23955;Parent=gene-C9F09_23955;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=C9F09_23955;product=histidine kinase;pseudo=true;transl_table=11 ##sequence-region PYKB01000594.1 1 2069 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000594.1 Genbank region 1 2069 . + . ID=PYKB01000594.1:1..2069;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000594.1 Genbank pseudogene 54 362 . - . ID=gene-C9F09_08650;Name=C9F09_08650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08650;pseudo=true PYKB01000594.1 Protein Homology CDS 54 362 . - 0 ID=cds-C9F09_08650;Parent=gene-C9F09_08650;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456881.1;locus_tag=C9F09_08650;product=basic amino acid antiporter;pseudo=true;transl_table=11 PYKB01000594.1 Genbank gene 580 2069 . - . ID=gene-C9F09_08655;Name=C9F09_08655;end_range=2069,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08655;partial=true PYKB01000594.1 Protein Homology CDS 580 2069 . - 2 ID=cds-TGC95466.1;Parent=gene-C9F09_08655;Dbxref=NCBI_GP:TGC95466.1;Name=TGC95466.1;end_range=2069,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=C9F09_08655;partial=true;product=phosphate acetyltransferase;protein_id=TGC95466.1;transl_table=11 ##sequence-region PYKB01000888.1 1 2067 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000888.1 Genbank region 1 2067 . + . ID=PYKB01000888.1:1..2067;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000888.1 Genbank gene 1 1025 . - . ID=gene-C9F09_14505;Name=C9F09_14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14505;partial=true;start_range=.,1 PYKB01000888.1 Protein Homology CDS 1 1025 . - 0 ID=cds-TGC90463.1;Parent=gene-C9F09_14505;Dbxref=NCBI_GP:TGC90463.1;Name=TGC90463.1;Note=DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=C9F09_14505;partial=true;product=bifunctional succinylornithine transaminase/acetylornithine transaminase;protein_id=TGC90463.1;start_range=.,1;transl_table=11 PYKB01000888.1 Genbank gene 1111 1674 . - . ID=gene-C9F09_14510;Name=C9F09_14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14510 PYKB01000888.1 Protein Homology CDS 1111 1674 . - 0 ID=cds-TGC90461.1;Parent=gene-C9F09_14510;Dbxref=NCBI_GP:TGC90461.1;Name=TGC90461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458433.1;locus_tag=C9F09_14510;product=aminodeoxychorismate synthase component 2;protein_id=TGC90461.1;transl_table=11 PYKB01000888.1 Genbank gene 1706 2067 . - . ID=gene-C9F09_14515;Name=C9F09_14515;end_range=2067,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14515;partial=true PYKB01000888.1 Protein Homology CDS 1706 2067 . - 2 ID=cds-TGC90462.1;Parent=gene-C9F09_14515;Dbxref=NCBI_GP:TGC90462.1;Name=TGC90462.1;end_range=2067,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=C9F09_14515;partial=true;product=cell filamentation protein Fic;protein_id=TGC90462.1;transl_table=11 ##sequence-region PYKB01001365.1 1 8884 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001365.1 Genbank region 1 8884 . + . ID=PYKB01001365.1:1..8884;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001365.1 Genbank gene 250 1125 . + . ID=gene-C9F09_23400;Name=C9F09_23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23400 PYKB01001365.1 Protein Homology CDS 250 1125 . + 0 ID=cds-TGC80253.1;Parent=gene-C9F09_23400;Dbxref=NCBI_GP:TGC80253.1;Name=TGC80253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458922.1;locus_tag=C9F09_23400;product=HNH endonuclease;protein_id=TGC80253.1;transl_table=11 PYKB01001365.1 Genbank gene 1602 2327 . - . ID=gene-C9F09_23405;Name=C9F09_23405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23405 PYKB01001365.1 Protein Homology CDS 1602 2327 . - 0 ID=cds-TGC80254.1;Parent=gene-C9F09_23405;Dbxref=NCBI_GP:TGC80254.1;Name=TGC80254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458924.3;locus_tag=C9F09_23405;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=TGC80254.1;transl_table=11 PYKB01001365.1 Genbank gene 2627 2818 . + . ID=gene-C9F09_23410;Name=C9F09_23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23410 PYKB01001365.1 Protein Homology CDS 2627 2818 . + 0 ID=cds-TGC80255.1;Parent=gene-C9F09_23410;Dbxref=NCBI_GP:TGC80255.1;Name=TGC80255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344272.1;locus_tag=C9F09_23410;product=hypothetical protein;protein_id=TGC80255.1;transl_table=11 PYKB01001365.1 Genbank gene 2878 4509 . - . ID=gene-C9F09_23415;Name=C9F09_23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23415 PYKB01001365.1 Protein Homology CDS 2878 4509 . - 0 ID=cds-TGC80256.1;Parent=gene-C9F09_23415;Dbxref=NCBI_GP:TGC80256.1;Name=TGC80256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=C9F09_23415;product=SAM-dependent methyltransferase;protein_id=TGC80256.1;transl_table=11 PYKB01001365.1 Genbank gene 4514 4771 . - . ID=gene-C9F09_23420;Name=C9F09_23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23420 PYKB01001365.1 Protein Homology CDS 4514 4771 . - 0 ID=cds-TGC80257.1;Parent=gene-C9F09_23420;Dbxref=NCBI_GP:TGC80257.1;Name=TGC80257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458926.1;locus_tag=C9F09_23420;product=hypothetical protein;protein_id=TGC80257.1;transl_table=11 PYKB01001365.1 Genbank pseudogene 4782 4963 . + . ID=gene-C9F09_23425;Name=C9F09_23425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23425;pseudo=true PYKB01001365.1 Protein Homology CDS 4782 4963 . + 0 ID=cds-C9F09_23425;Parent=gene-C9F09_23425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830812.1;locus_tag=C9F09_23425;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001365.1 Genbank gene 5014 5205 . - . ID=gene-C9F09_23430;Name=C9F09_23430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23430 PYKB01001365.1 Protein Homology CDS 5014 5205 . - 0 ID=cds-TGC80258.1;Parent=gene-C9F09_23430;Dbxref=NCBI_GP:TGC80258.1;Name=TGC80258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507507.1;locus_tag=C9F09_23430;product=hypothetical protein;protein_id=TGC80258.1;transl_table=11 PYKB01001365.1 Genbank gene 5260 5868 . + . ID=gene-C9F09_23435;Name=C9F09_23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23435 PYKB01001365.1 Protein Homology CDS 5260 5868 . + 0 ID=cds-TGC80259.1;Parent=gene-C9F09_23435;Dbxref=NCBI_GP:TGC80259.1;Name=TGC80259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458927.1;locus_tag=C9F09_23435;product=DUF1062 domain-containing protein;protein_id=TGC80259.1;transl_table=11 PYKB01001365.1 Genbank gene 6120 7115 . + . ID=gene-C9F09_23440;Name=C9F09_23440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23440 PYKB01001365.1 Protein Homology CDS 6120 7115 . + 0 ID=cds-TGC80260.1;Parent=gene-C9F09_23440;Dbxref=NCBI_GP:TGC80260.1;Name=TGC80260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001240361.1;locus_tag=C9F09_23440;product=hypothetical protein;protein_id=TGC80260.1;transl_table=11 PYKB01001365.1 Genbank gene 7391 8302 . + . ID=gene-C9F09_23445;Name=C9F09_23445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23445 PYKB01001365.1 Protein Homology CDS 7391 8302 . + 0 ID=cds-TGC80261.1;Parent=gene-C9F09_23445;Dbxref=NCBI_GP:TGC80261.1;Name=TGC80261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=C9F09_23445;product=hypothetical protein;protein_id=TGC80261.1;transl_table=11 PYKB01001365.1 Genbank pseudogene 8507 8818 . + . ID=gene-C9F09_23450;Name=C9F09_23450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23450;pseudo=true PYKB01001365.1 Protein Homology CDS 8507 8818 . + 0 ID=cds-C9F09_23450;Parent=gene-C9F09_23450;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=C9F09_23450;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001692.1 1 2067 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001692.1 Genbank region 1 2067 . + . ID=PYKB01001692.1:1..2067;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001692.1 Genbank gene 1 237 . - . ID=gene-C9F09_29535;Name=C9F09_29535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29535;partial=true;start_range=.,1 PYKB01001692.1 Protein Homology CDS 1 237 . - 0 ID=cds-TGC72375.1;Parent=gene-C9F09_29535;Dbxref=NCBI_GP:TGC72375.1;Name=TGC72375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458830.1;locus_tag=C9F09_29535;partial=true;product=hypothetical protein;protein_id=TGC72375.1;start_range=.,1;transl_table=11 PYKB01001692.1 Genbank pseudogene 271 458 . - . ID=gene-C9F09_29540;Name=C9F09_29540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29540;pseudo=true PYKB01001692.1 Protein Homology CDS 271 458 . - 0 ID=cds-C9F09_29540;Parent=gene-C9F09_29540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001337177.1;locus_tag=C9F09_29540;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001692.1 Genbank gene 415 1077 . + . ID=gene-C9F09_29545;Name=C9F09_29545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29545 PYKB01001692.1 Protein Homology CDS 415 1077 . + 0 ID=cds-TGC72376.1;Parent=gene-C9F09_29545;Dbxref=NCBI_GP:TGC72376.1;Name=TGC72376.1;Note=FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458831.3;locus_tag=C9F09_29545;product=peptidylprolyl isomerase;protein_id=TGC72376.1;transl_table=11 PYKB01001692.1 Genbank gene 1373 2067 . + . ID=gene-C9F09_29550;Name=C9F09_29550;end_range=2067,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29550;partial=true PYKB01001692.1 Protein Homology CDS 1373 2067 . + 0 ID=cds-TGC72377.1;Parent=gene-C9F09_29550;Dbxref=NCBI_GP:TGC72377.1;Name=TGC72377.1;end_range=2067,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=C9F09_29550;partial=true;product=D-serine/D-alanine/glycine transporter;protein_id=TGC72377.1;transl_table=11 ##sequence-region PYKB01001286.1 1 2066 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001286.1 Genbank region 1 2066 . + . ID=PYKB01001286.1:1..2066;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001286.1 Genbank gene 1 246 . + . ID=gene-C9F09_22020;Name=C9F09_22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22020;partial=true;start_range=.,1 PYKB01001286.1 Protein Homology CDS 1 246 . + 0 ID=cds-TGC81878.1;Parent=gene-C9F09_22020;Dbxref=NCBI_GP:TGC81878.1;Name=TGC81878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456952.1;locus_tag=C9F09_22020;partial=true;product=NupC/NupG family nucleoside CNT transporter;protein_id=TGC81878.1;start_range=.,1;transl_table=11 PYKB01001286.1 Genbank gene 299 2066 . - . ID=gene-C9F09_22025;Name=C9F09_22025;end_range=2066,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22025;partial=true PYKB01001286.1 Protein Homology CDS 299 2066 . - 1 ID=cds-TGC81879.1;Parent=gene-C9F09_22025;Dbxref=NCBI_GP:TGC81879.1;Name=TGC81879.1;end_range=2066,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=C9F09_22025;partial=true;product=hypothetical protein;protein_id=TGC81879.1;transl_table=11 ##sequence-region PYKB01000837.1 1 2061 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000837.1 Genbank region 1 2061 . + . ID=PYKB01000837.1:1..2061;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000837.1 Genbank gene 1 128 . + . ID=gene-C9F09_13225;Name=C9F09_13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13225;partial=true;start_range=.,1 PYKB01000837.1 Protein Homology CDS 1 128 . + 2 ID=cds-TGC91521.1;Parent=gene-C9F09_13225;Dbxref=NCBI_GP:TGC91521.1;Name=TGC91521.1;Note=involved in the transport of glycerol into the cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=C9F09_13225;partial=true;product=aquaporin;protein_id=TGC91521.1;start_range=.,1;transl_table=11 PYKB01000837.1 Genbank gene 345 1256 . + . ID=gene-C9F09_13230;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=C9F09_13230 PYKB01000837.1 Protein Homology CDS 345 1256 . + 0 ID=cds-TGC91522.1;Parent=gene-C9F09_13230;Dbxref=NCBI_GP:TGC91522.1;Name=TGC91522.1;gbkey=CDS;gene=pocR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=C9F09_13230;product=regulatory protein PocR;protein_id=TGC91522.1;transl_table=11 PYKB01000837.1 cmsearch riboswitch 1582 1757 . + . ID=id-PYKB01000837.1:1582..1757;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00174,COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PYKB01000837.1 Genbank gene 1854 2061 . + . ID=gene-C9F09_13235;Name=C9F09_13235;end_range=2061,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13235;partial=true PYKB01000837.1 Protein Homology CDS 1854 2061 . + 0 ID=cds-TGC91523.1;Parent=gene-C9F09_13235;Dbxref=NCBI_GP:TGC91523.1;Name=TGC91523.1;end_range=2061,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=C9F09_13235;partial=true;product=cobyrinic acid a%2Cc-diamide synthase;protein_id=TGC91523.1;transl_table=11 ##sequence-region PYKB01001264.1 1 2061 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001264.1 Genbank region 1 2061 . + . ID=PYKB01001264.1:1..2061;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001264.1 Genbank gene 1 226 . - . ID=gene-C9F09_21590;Name=C9F09_21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21590;partial=true;start_range=.,1 PYKB01001264.1 Protein Homology CDS 1 226 . - 0 ID=cds-TGC82255.1;Parent=gene-C9F09_21590;Dbxref=NCBI_GP:TGC82255.1;Name=TGC82255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774950.1;locus_tag=C9F09_21590;partial=true;product=hypothetical protein;protein_id=TGC82255.1;start_range=.,1;transl_table=11 PYKB01001264.1 Genbank gene 237 779 . - . ID=gene-C9F09_21595;Name=C9F09_21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21595 PYKB01001264.1 Protein Homology CDS 237 779 . - 0 ID=cds-TGC82256.1;Parent=gene-C9F09_21595;Dbxref=NCBI_GP:TGC82256.1;Name=TGC82256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=C9F09_21595;product=NADH-quinone oxidoreductase subunit I;protein_id=TGC82256.1;transl_table=11 PYKB01001264.1 Genbank gene 794 1771 . - . ID=gene-C9F09_21600;Name=C9F09_21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21600 PYKB01001264.1 Protein Homology CDS 794 1771 . - 0 ID=cds-TGC82257.1;Parent=gene-C9F09_21600;Dbxref=NCBI_GP:TGC82257.1;Name=TGC82257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=C9F09_21600;product=NADH-quinone oxidoreductase subunit H;protein_id=TGC82257.1;transl_table=11 PYKB01001264.1 Genbank gene 1768 2061 . - . ID=gene-C9F09_21605;Name=C9F09_21605;end_range=2061,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21605;partial=true PYKB01001264.1 Protein Homology CDS 1768 2061 . - 0 ID=cds-TGC82258.1;Parent=gene-C9F09_21605;Dbxref=NCBI_GP:TGC82258.1;Name=TGC82258.1;end_range=2061,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456865.1;locus_tag=C9F09_21605;partial=true;product=hypothetical protein;protein_id=TGC82258.1;transl_table=11 ##sequence-region PYKB01000446.1 1 2061 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000446.1 Genbank region 1 2061 . + . ID=PYKB01000446.1:1..2061;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000446.1 Genbank gene 17 811 . - . ID=gene-C9F09_05545;Name=C9F09_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05545 PYKB01000446.1 Protein Homology CDS 17 811 . - 0 ID=cds-TGC98698.1;Parent=gene-C9F09_05545;Dbxref=NCBI_GP:TGC98698.1;Name=TGC98698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=C9F09_05545;product=thymidylate synthase;protein_id=TGC98698.1;transl_table=11 PYKB01000446.1 Genbank gene 818 1693 . - . ID=gene-C9F09_05550;Name=C9F09_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05550 PYKB01000446.1 Protein Homology CDS 818 1693 . - 0 ID=cds-TGC98699.1;Parent=gene-C9F09_05550;Dbxref=NCBI_GP:TGC98699.1;Name=TGC98699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457396.1;locus_tag=C9F09_05550;product=prolipoprotein diacylglyceryl transferase;protein_id=TGC98699.1;transl_table=11 ##sequence-region PYKB01000793.1 1 2055 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000793.1 Genbank region 1 2055 . + . ID=PYKB01000793.1:1..2055;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000793.1 Genbank gene 277 1191 . + . ID=gene-C9F09_12320;Name=C9F09_12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12320 PYKB01000793.1 Protein Homology CDS 277 1191 . + 0 ID=cds-TGC92261.1;Parent=gene-C9F09_12320;Dbxref=NCBI_GP:TGC92261.1;Name=TGC92261.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456908.1;locus_tag=C9F09_12320;product=acetyl-CoA carboxylase carboxyl transferase subunit beta;protein_id=TGC92261.1;transl_table=11 PYKB01000793.1 Genbank gene 1259 2055 . + . ID=gene-C9F09_12325;Name=C9F09_12325;end_range=2055,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12325;partial=true PYKB01000793.1 Protein Homology CDS 1259 2055 . + 0 ID=cds-TGC92262.1;Parent=gene-C9F09_12325;Dbxref=NCBI_GP:TGC92262.1;Name=TGC92262.1;end_range=2055,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=C9F09_12325;partial=true;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=TGC92262.1;transl_table=11 ##sequence-region PYKB01001656.1 1 2053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001656.1 Genbank region 1 2053 . + . ID=PYKB01001656.1:1..2053;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001656.1 Genbank gene 1 951 . + . ID=gene-C9F09_28880;Name=C9F09_28880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28880;partial=true;start_range=.,1 PYKB01001656.1 Protein Homology CDS 1 951 . + 0 ID=cds-TGC73409.1;Parent=gene-C9F09_28880;Dbxref=NCBI_GP:TGC73409.1;Name=TGC73409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135577.1;locus_tag=C9F09_28880;partial=true;product=nucleobase:cation symporter;protein_id=TGC73409.1;start_range=.,1;transl_table=11 PYKB01001656.1 Genbank gene 1498 2053 . + . ID=gene-C9F09_28885;Name=C9F09_28885;end_range=2053,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28885;partial=true PYKB01001656.1 Protein Homology CDS 1498 2053 . + 0 ID=cds-TGC73410.1;Parent=gene-C9F09_28885;Dbxref=NCBI_GP:TGC73410.1;Name=TGC73410.1;Note=DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides;end_range=2053,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458289.1;locus_tag=C9F09_28885;partial=true;product=ABC transporter substrate-binding protein;protein_id=TGC73410.1;transl_table=11 ##sequence-region PYKB01001431.1 1 2052 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001431.1 Genbank region 1 2052 . + . ID=PYKB01001431.1:1..2052;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001431.1 Genbank gene 1 894 . + . ID=gene-C9F09_24615;Name=C9F09_24615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24615;partial=true;start_range=.,1 PYKB01001431.1 Protein Homology CDS 1 894 . + 0 ID=cds-TGC78764.1;Parent=gene-C9F09_24615;Dbxref=NCBI_GP:TGC78764.1;Name=TGC78764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=C9F09_24615;partial=true;product=L-threonine 3-dehydrogenase;protein_id=TGC78764.1;start_range=.,1;transl_table=11 PYKB01001431.1 Genbank pseudogene 1188 2000 . + . ID=gene-C9F09_24620;Name=C9F09_24620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_24620;pseudo=true PYKB01001431.1 Protein Homology CDS 1188 2000 . + 0 ID=cds-C9F09_24620;Parent=gene-C9F09_24620;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=C9F09_24620;product=glycosyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKB01000302.1 1 2045 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000302.1 Genbank region 1 2045 . + . ID=PYKB01000302.1:1..2045;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000302.1 Genbank gene 1 1471 . + . ID=gene-C9F09_03410;Name=C9F09_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03410;partial=true;start_range=.,1 PYKB01000302.1 Protein Homology CDS 1 1471 . + 1 ID=cds-TGD01453.1;Parent=gene-C9F09_03410;Dbxref=NCBI_GP:TGD01453.1;Name=TGD01453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=C9F09_03410;partial=true;product=30S ribosomal protein S12 methylthiotransferase accessory protein YcaO;protein_id=TGD01453.1;start_range=.,1;transl_table=11 PYKB01000302.1 Genbank gene 1876 2045 . + . ID=gene-C9F09_03415;Name=C9F09_03415;end_range=2045,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03415;partial=true PYKB01000302.1 Protein Homology CDS 1876 2045 . + 0 ID=cds-TGD01454.1;Parent=gene-C9F09_03415;Dbxref=NCBI_GP:TGD01454.1;Name=TGD01454.1;end_range=2045,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455461.1;locus_tag=C9F09_03415;partial=true;product=formate transporter FocA;protein_id=TGD01454.1;transl_table=11 ##sequence-region PYKB01000858.1 1 2044 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000858.1 Genbank region 1 2044 . + . ID=PYKB01000858.1:1..2044;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000858.1 Genbank gene 4 1095 . + . ID=gene-C9F09_13700;Name=C9F09_13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13700 PYKB01000858.1 Protein Homology CDS 4 1095 . + 0 ID=cds-TGC91071.1;Parent=gene-C9F09_13700;Dbxref=NCBI_GP:TGC91071.1;Name=TGC91071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562854.1;locus_tag=C9F09_13700;product=glycerate 2-kinase;protein_id=TGC91071.1;transl_table=11 PYKB01000858.1 Genbank gene 1142 1612 . - . ID=gene-C9F09_13705;Name=C9F09_13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13705 PYKB01000858.1 Protein Homology CDS 1142 1612 . - 0 ID=cds-TGC91070.1;Parent=gene-C9F09_13705;Dbxref=NCBI_GP:TGC91070.1;Name=TGC91070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457025.1;locus_tag=C9F09_13705;product=thioredoxin-dependent thiol peroxidase;protein_id=TGC91070.1;transl_table=11 PYKB01000858.1 Genbank gene 1612 2044 . - . ID=gene-C9F09_13710;Name=C9F09_13710;end_range=2044,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13710;partial=true PYKB01000858.1 Protein Homology CDS 1612 2044 . - 1 ID=cds-TGC91072.1;Parent=gene-C9F09_13710;Dbxref=NCBI_GP:TGC91072.1;Name=TGC91072.1;end_range=2044,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461425.3;locus_tag=C9F09_13710;partial=true;product=glycine cleavage system transcriptional repressor;protein_id=TGC91072.1;transl_table=11 ##sequence-region PYKB01000803.1 1 8854 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000803.1 Genbank region 1 8854 . + . ID=PYKB01000803.1:1..8854;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000803.1 Genbank gene 1 437 . - . ID=gene-C9F09_12485;Name=C9F09_12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12485;partial=true;start_range=.,1 PYKB01000803.1 Protein Homology CDS 1 437 . - 0 ID=cds-TGC92118.1;Parent=gene-C9F09_12485;Dbxref=NCBI_GP:TGC92118.1;Name=TGC92118.1;Note=transports L-rhamnose and L-lyxose into the cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=C9F09_12485;partial=true;product=rhamnose/proton symporter RhaT;protein_id=TGC92118.1;start_range=.,1;transl_table=11 PYKB01000803.1 Genbank gene 1056 1739 . + . ID=gene-C9F09_12490;Name=C9F09_12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12490 PYKB01000803.1 Protein Homology CDS 1056 1739 . + 0 ID=cds-TGC92119.1;Parent=gene-C9F09_12490;Dbxref=NCBI_GP:TGC92119.1;Name=TGC92119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457999.1;locus_tag=C9F09_12490;product=hypothetical protein;protein_id=TGC92119.1;transl_table=11 PYKB01000803.1 Genbank gene 1897 3204 . - . ID=gene-C9F09_12495;Name=C9F09_12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12495 PYKB01000803.1 Protein Homology CDS 1897 3204 . - 0 ID=cds-TGC92120.1;Parent=gene-C9F09_12495;Dbxref=NCBI_GP:TGC92120.1;Name=TGC92120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=C9F09_12495;product=hypothetical protein;protein_id=TGC92120.1;transl_table=11 PYKB01000803.1 Genbank gene 3197 3712 . - . ID=gene-C9F09_12500;Name=C9F09_12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12500 PYKB01000803.1 Protein Homology CDS 3197 3712 . - 0 ID=cds-TGC92121.1;Parent=gene-C9F09_12500;Dbxref=NCBI_GP:TGC92121.1;Name=TGC92121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=C9F09_12500;product=TRAP transporter small permease;protein_id=TGC92121.1;transl_table=11 PYKB01000803.1 Genbank gene 3731 4714 . - . ID=gene-C9F09_12505;Name=C9F09_12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12505 PYKB01000803.1 Protein Homology CDS 3731 4714 . - 0 ID=cds-TGC92122.1;Parent=gene-C9F09_12505;Dbxref=NCBI_GP:TGC92122.1;Name=TGC92122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=C9F09_12505;product=hypothetical protein;protein_id=TGC92122.1;transl_table=11 PYKB01000803.1 Genbank gene 5043 5663 . + . ID=gene-C9F09_12510;Name=C9F09_12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12510 PYKB01000803.1 Protein Homology CDS 5043 5663 . + 0 ID=cds-TGC92123.1;Parent=gene-C9F09_12510;Dbxref=NCBI_GP:TGC92123.1;Name=TGC92123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=C9F09_12510;product=superoxide dismutase [Mn];protein_id=TGC92123.1;transl_table=11 PYKB01000803.1 Genbank gene 5670 6422 . + . ID=gene-C9F09_12515;Name=C9F09_12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12515 PYKB01000803.1 Protein Homology CDS 5670 6422 . + 0 ID=cds-TGC92124.1;Parent=gene-C9F09_12515;Dbxref=NCBI_GP:TGC92124.1;Name=TGC92124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457995.3;locus_tag=C9F09_12515;product=6-N-hydroxylaminopurine resistance protein;protein_id=TGC92124.1;transl_table=11 PYKB01000803.1 Genbank gene 6434 6829 . + . ID=gene-C9F09_12520;Name=C9F09_12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12520 PYKB01000803.1 Protein Homology CDS 6434 6829 . + 0 ID=cds-TGC92125.1;Parent=gene-C9F09_12520;Dbxref=NCBI_GP:TGC92125.1;Name=TGC92125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457994.1;locus_tag=C9F09_12520;product=nuclear transport factor 2 family protein;protein_id=TGC92125.1;transl_table=11 PYKB01000803.1 Genbank gene 6950 7153 . + . ID=gene-C9F09_12525;Name=C9F09_12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12525 PYKB01000803.1 Protein Homology CDS 6950 7153 . + 0 ID=cds-TGC92126.1;Parent=gene-C9F09_12525;Dbxref=NCBI_GP:TGC92126.1;Name=TGC92126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338671.1;locus_tag=C9F09_12525;product=hypothetical protein;protein_id=TGC92126.1;transl_table=11 PYKB01000803.1 Genbank gene 7201 8574 . - . ID=gene-C9F09_12530;Name=C9F09_12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12530 PYKB01000803.1 Protein Homology CDS 7201 8574 . - 0 ID=cds-TGC92127.1;Parent=gene-C9F09_12530;Dbxref=NCBI_GP:TGC92127.1;Name=TGC92127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457993.1;locus_tag=C9F09_12530;product=two-component system sensor histidine kinase CpxA;protein_id=TGC92127.1;transl_table=11 PYKB01000803.1 Genbank gene 8571 8807 . - . ID=gene-C9F09_12535;Name=C9F09_12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12535 PYKB01000803.1 Protein Homology CDS 8571 8807 . - 0 ID=cds-TGC92128.1;Parent=gene-C9F09_12535;Dbxref=NCBI_GP:TGC92128.1;Name=TGC92128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007853048.1;locus_tag=C9F09_12535;product=transcriptional regulator;protein_id=TGC92128.1;transl_table=11 ##sequence-region PYKB01001436.1 1 17576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001436.1 Genbank region 1 17576 . + . ID=PYKB01001436.1:1..17576;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001436.1 Genbank gene 1 2232 . + . ID=gene-C9F09_24670;Name=C9F09_24670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24670;partial=true;start_range=.,1 PYKB01001436.1 Protein Homology CDS 1 2232 . + 0 ID=cds-TGC78642.1;Parent=gene-C9F09_24670;Dbxref=NCBI_GP:TGC78642.1;Name=TGC78642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=C9F09_24670;partial=true;product=translation initiation factor IF-2;protein_id=TGC78642.1;start_range=.,1;transl_table=11 PYKB01001436.1 Genbank gene 2453 2854 . + . ID=gene-C9F09_24675;Name=C9F09_24675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24675 PYKB01001436.1 Protein Homology CDS 2453 2854 . + 0 ID=cds-TGC78643.1;Parent=gene-C9F09_24675;Dbxref=NCBI_GP:TGC78643.1;Name=TGC78643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457667.1;locus_tag=C9F09_24675;product=30S ribosome-binding factor RbfA;protein_id=TGC78643.1;transl_table=11 PYKB01001436.1 Genbank gene 2854 3798 . + . ID=gene-C9F09_24680;Name=C9F09_24680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24680 PYKB01001436.1 Protein Homology CDS 2854 3798 . + 0 ID=cds-TGC78644.1;Parent=gene-C9F09_24680;Dbxref=NCBI_GP:TGC78644.1;Name=TGC78644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=C9F09_24680;product=tRNA pseudouridine(55) synthase TruB;protein_id=TGC78644.1;transl_table=11 PYKB01001436.1 Genbank gene 3949 4218 . + . ID=gene-C9F09_24685;Name=C9F09_24685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24685 PYKB01001436.1 Protein Homology CDS 3949 4218 . + 0 ID=cds-TGC78645.1;Parent=gene-C9F09_24685;Dbxref=NCBI_GP:TGC78645.1;Name=TGC78645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=C9F09_24685;product=30S ribosomal protein S15;protein_id=TGC78645.1;transl_table=11 PYKB01001436.1 Genbank gene 4460 6595 . + . ID=gene-C9F09_24690;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=C9F09_24690 PYKB01001436.1 Protein Homology CDS 4460 6595 . + 0 ID=cds-TGC78657.1;Parent=gene-C9F09_24690;Dbxref=NCBI_GP:TGC78657.1;Name=TGC78657.1;gbkey=CDS;gene=pnp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=C9F09_24690;product=polyribonucleotide nucleotidyltransferase;protein_id=TGC78657.1;transl_table=11 PYKB01001436.1 Genbank gene 6705 7589 . + . ID=gene-C9F09_24695;Name=C9F09_24695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24695 PYKB01001436.1 Protein Homology CDS 6705 7589 . + 0 ID=cds-TGC78646.1;Parent=gene-C9F09_24695;Dbxref=NCBI_GP:TGC78646.1;Name=TGC78646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=C9F09_24695;product=lipoprotein NlpI;protein_id=TGC78646.1;transl_table=11 PYKB01001436.1 Genbank gene 7717 9657 . + . ID=gene-C9F09_24700;Name=C9F09_24700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24700 PYKB01001436.1 Protein Homology CDS 7717 9657 . + 0 ID=cds-TGC78647.1;Parent=gene-C9F09_24700;Dbxref=NCBI_GP:TGC78647.1;Name=TGC78647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462193.3;locus_tag=C9F09_24700;product=DEAD/DEAH family ATP-dependent RNA helicase;protein_id=TGC78647.1;transl_table=11 PYKB01001436.1 Genbank gene 9811 11055 . + . ID=gene-C9F09_24705;Name=C9F09_24705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24705 PYKB01001436.1 Protein Homology CDS 9811 11055 . + 0 ID=cds-TGC78648.1;Parent=gene-C9F09_24705;Dbxref=NCBI_GP:TGC78648.1;Name=TGC78648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131807.1;locus_tag=C9F09_24705;product=tryptophan permease;protein_id=TGC78648.1;transl_table=11 PYKB01001436.1 Genbank gene 11116 11646 . - . ID=gene-C9F09_24710;Name=C9F09_24710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24710 PYKB01001436.1 Protein Homology CDS 11116 11646 . - 0 ID=cds-TGC78649.1;Parent=gene-C9F09_24710;Dbxref=NCBI_GP:TGC78649.1;Name=TGC78649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462191.1;locus_tag=C9F09_24710;product=cytoplasmic protein;protein_id=TGC78649.1;transl_table=11 PYKB01001436.1 Genbank gene 11805 12524 . + . ID=gene-C9F09_24715;Name=C9F09_24715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24715 PYKB01001436.1 Protein Homology CDS 11805 12524 . + 0 ID=cds-TGC78650.1;Parent=gene-C9F09_24715;Dbxref=NCBI_GP:TGC78650.1;Name=TGC78650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462190.1;locus_tag=C9F09_24715;product=hypothetical protein;protein_id=TGC78650.1;transl_table=11 PYKB01001436.1 Genbank gene 12502 13509 . - . ID=gene-C9F09_24720;Name=C9F09_24720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24720 PYKB01001436.1 Protein Homology CDS 12502 13509 . - 0 ID=cds-TGC78651.1;Parent=gene-C9F09_24720;Dbxref=NCBI_GP:TGC78651.1;Name=TGC78651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131802.1;locus_tag=C9F09_24720;product=luciferase-like monooxygenase;protein_id=TGC78651.1;transl_table=11 PYKB01001436.1 Genbank gene 13687 14583 . - . ID=gene-C9F09_24725;Name=C9F09_24725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24725 PYKB01001436.1 Protein Homology CDS 13687 14583 . - 0 ID=cds-TGC78652.1;Parent=gene-C9F09_24725;Dbxref=NCBI_GP:TGC78652.1;Name=TGC78652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462188.3;locus_tag=C9F09_24725;product=U32 family peptidase;protein_id=TGC78652.1;transl_table=11 PYKB01001436.1 Genbank gene 14574 15569 . - . ID=gene-C9F09_24730;Name=C9F09_24730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24730 PYKB01001436.1 Protein Homology CDS 14574 15569 . - 0 ID=cds-TGC78653.1;Parent=gene-C9F09_24730;Dbxref=NCBI_GP:TGC78653.1;Name=TGC78653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=C9F09_24730;product=U32 family peptidase;protein_id=TGC78653.1;transl_table=11 PYKB01001436.1 Genbank gene 15786 16310 . + . ID=gene-C9F09_24735;Name=C9F09_24735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24735 PYKB01001436.1 Protein Homology CDS 15786 16310 . + 0 ID=cds-TGC78654.1;Parent=gene-C9F09_24735;Dbxref=NCBI_GP:TGC78654.1;Name=TGC78654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=C9F09_24735;product=SCP2 domain-containing protein;protein_id=TGC78654.1;transl_table=11 PYKB01001436.1 Genbank gene 16304 16807 . + . ID=gene-C9F09_24740;Name=C9F09_24740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24740 PYKB01001436.1 Protein Homology CDS 16304 16807 . + 0 ID=cds-TGC78655.1;Parent=gene-C9F09_24740;Dbxref=NCBI_GP:TGC78655.1;Name=TGC78655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457656.1;locus_tag=C9F09_24740;product=N-acetyltransferase;protein_id=TGC78655.1;transl_table=11 PYKB01001436.1 Genbank gene 16794 17111 . - . ID=gene-C9F09_24745;Name=C9F09_24745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24745 PYKB01001436.1 Protein Homology CDS 16794 17111 . - 0 ID=cds-TGC78656.1;Parent=gene-C9F09_24745;Dbxref=NCBI_GP:TGC78656.1;Name=TGC78656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457655.1;locus_tag=C9F09_24745;product=GIY-YIG nuclease family protein;protein_id=TGC78656.1;transl_table=11 PYKB01001436.1 Genbank pseudogene 17149 17514 . + . ID=gene-C9F09_24750;Name=C9F09_24750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_24750;pseudo=true PYKB01001436.1 Protein Homology CDS 17149 17514 . + 0 ID=cds-C9F09_24750;Parent=gene-C9F09_24750;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457654.1;locus_tag=C9F09_24750;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001187.1 1 2036 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001187.1 Genbank region 1 2036 . + . ID=PYKB01001187.1:1..2036;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001187.1 Genbank gene 1 1368 . + . ID=gene-C9F09_20180;Name=C9F09_20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20180;partial=true;start_range=.,1 PYKB01001187.1 Protein Homology CDS 1 1368 . + 0 ID=cds-TGC83801.1;Parent=gene-C9F09_20180;Dbxref=NCBI_GP:TGC83801.1;Name=TGC83801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=C9F09_20180;partial=true;product=amidophosphoribosyltransferase;protein_id=TGC83801.1;start_range=.,1;transl_table=11 PYKB01001187.1 Genbank gene 1404 2036 . - . ID=gene-C9F09_20185;Name=C9F09_20185;end_range=2036,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20185;partial=true PYKB01001187.1 Protein Homology CDS 1404 2036 . - 0 ID=cds-TGC83802.1;Parent=gene-C9F09_20185;Dbxref=NCBI_GP:TGC83802.1;Name=TGC83802.1;end_range=2036,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456903.1;locus_tag=C9F09_20185;partial=true;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=TGC83802.1;transl_table=11 ##sequence-region PYKB01001299.1 1 2035 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001299.1 Genbank region 1 2035 . + . ID=PYKB01001299.1:1..2035;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001299.1 Genbank gene 1 280 . + . ID=gene-C9F09_22230;Name=pagp;gbkey=Gene;gene=pagp;gene_biotype=protein_coding;locus_tag=C9F09_22230;partial=true;start_range=.,1 PYKB01001299.1 Protein Homology CDS 1 280 . + 1 ID=cds-TGC81660.1;Parent=gene-C9F09_22230;Dbxref=NCBI_GP:TGC81660.1;Name=TGC81660.1;gbkey=CDS;gene=pagp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455205.1;locus_tag=C9F09_22230;partial=true;product=lipid IV(A) palmitoyltransferase PagP;protein_id=TGC81660.1;start_range=.,1;transl_table=11 PYKB01001299.1 Genbank gene 468 677 . + . ID=gene-C9F09_22235;Name=C9F09_22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22235 PYKB01001299.1 Protein Homology CDS 468 677 . + 0 ID=cds-TGC81661.1;Parent=gene-C9F09_22235;Dbxref=NCBI_GP:TGC81661.1;Name=TGC81661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455206.1;locus_tag=C9F09_22235;product=cold-shock protein;protein_id=TGC81661.1;transl_table=11 PYKB01001299.1 Genbank gene 735 1118 . - . ID=gene-C9F09_22240;Name=C9F09_22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22240 PYKB01001299.1 Protein Homology CDS 735 1118 . - 0 ID=cds-TGC81662.1;Parent=gene-C9F09_22240;Dbxref=NCBI_GP:TGC81662.1;Name=TGC81662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455207.1;locus_tag=C9F09_22240;product=fluoride efflux transporter CrcB;protein_id=TGC81662.1;transl_table=11 PYKB01001299.1 Genbank gene 1209 1997 . + . ID=gene-C9F09_22245;Name=C9F09_22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22245 PYKB01001299.1 Protein Homology CDS 1209 1997 . + 0 ID=cds-TGC81663.1;Parent=gene-C9F09_22245;Dbxref=NCBI_GP:TGC81663.1;Name=TGC81663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=C9F09_22245;product=hydrolase;protein_id=TGC81663.1;transl_table=11 ##sequence-region PYKB01000818.1 1 1960 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000818.1 Genbank region 1 1960 . + . ID=PYKB01000818.1:1..1960;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000818.1 Genbank gene 1 143 . - . ID=gene-C9F09_12790;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=C9F09_12790;partial=true;start_range=.,1 PYKB01000818.1 Protein Homology CDS 1 143 . - 0 ID=cds-TGC91875.1;Parent=gene-C9F09_12790;Dbxref=NCBI_GP:TGC91875.1;Name=TGC91875.1;Note=negative transcriptional regulator of the gcvTHP operon;gbkey=CDS;gene=gcvR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457024.3;locus_tag=C9F09_12790;partial=true;product=glycine cleavage system transcriptional repressor;protein_id=TGC91875.1;start_range=.,1;transl_table=11 PYKB01000818.1 Genbank gene 223 1101 . + . ID=gene-C9F09_12795;Name=C9F09_12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12795 PYKB01000818.1 Protein Homology CDS 223 1101 . + 0 ID=cds-TGC91873.1;Parent=gene-C9F09_12795;Dbxref=NCBI_GP:TGC91873.1;Name=TGC91873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=C9F09_12795;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=TGC91873.1;transl_table=11 PYKB01000818.1 Genbank gene 1118 1960 . + . ID=gene-C9F09_12800;Name=C9F09_12800;end_range=1960,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12800;partial=true PYKB01000818.1 Protein Homology CDS 1118 1960 . + 0 ID=cds-TGC91874.1;Parent=gene-C9F09_12800;Dbxref=NCBI_GP:TGC91874.1;Name=TGC91874.1;end_range=1960,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=C9F09_12800;partial=true;product=outer membrane protein assembly factor BamC;protein_id=TGC91874.1;transl_table=11 ##sequence-region PYKB01001328.1 1 2031 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001328.1 Genbank region 1 2031 . + . ID=PYKB01001328.1:1..2031;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001328.1 Genbank gene 1 707 . - . ID=gene-C9F09_22815;Name=C9F09_22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22815;partial=true;start_range=.,1 PYKB01001328.1 Protein Homology CDS 1 707 . - 0 ID=cds-TGC80982.1;Parent=gene-C9F09_22815;Dbxref=NCBI_GP:TGC80982.1;Name=TGC80982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458956.1;locus_tag=C9F09_22815;partial=true;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=TGC80982.1;start_range=.,1;transl_table=11 PYKB01001328.1 Genbank gene 990 1451 . - . ID=gene-C9F09_22820;Name=C9F09_22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_22820 PYKB01001328.1 Protein Homology CDS 990 1451 . - 0 ID=cds-TGC80981.1;Parent=gene-C9F09_22820;Dbxref=NCBI_GP:TGC80981.1;Name=TGC80981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458957.1;locus_tag=C9F09_22820;product=DUF2501 domain-containing protein;protein_id=TGC80981.1;transl_table=11 PYKB01001328.1 Genbank pseudogene 1509 1952 . - . ID=gene-C9F09_22825;Name=C9F09_22825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22825;pseudo=true PYKB01001328.1 Protein Homology CDS 1509 1952 . - 0 ID=cds-C9F09_22825;Parent=gene-C9F09_22825;Note=acts to load the DnaB helicase onto the initiation site during DNA replication%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=C9F09_22825;product=DNA replication protein DnaC;pseudo=true;transl_table=11 ##sequence-region PYKB01000274.1 1 2029 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000274.1 Genbank region 1 2029 . + . ID=PYKB01000274.1:1..2029;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000274.1 Genbank gene 1 1086 . - . ID=gene-C9F09_03095;Name=C9F09_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03095;partial=true;start_range=.,1 PYKB01000274.1 Protein Homology CDS 1 1086 . - 0 ID=cds-TGD01914.1;Parent=gene-C9F09_03095;Dbxref=NCBI_GP:TGD01914.1;Name=TGD01914.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456774.1;locus_tag=C9F09_03095;partial=true;product=microcin ABC transporter permease;protein_id=TGD01914.1;start_range=.,1;transl_table=11 PYKB01000274.1 Genbank gene 1096 2029 . - . ID=gene-C9F09_03100;Name=C9F09_03100;end_range=2029,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03100;partial=true PYKB01000274.1 Protein Homology CDS 1096 2029 . - 1 ID=cds-TGD01915.1;Parent=gene-C9F09_03100;Dbxref=NCBI_GP:TGD01915.1;Name=TGD01915.1;Note=with YejBEF is involved in resistance to microcin C;end_range=2029,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456773.1;locus_tag=C9F09_03100;partial=true;product=ABC transporter substrate-binding protein;protein_id=TGD01915.1;transl_table=11 ##sequence-region PYKB01001259.1 1 2025 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001259.1 Genbank region 1 2025 . + . ID=PYKB01001259.1:1..2025;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001259.1 Genbank gene 1 854 . + . ID=gene-C9F09_21530;Name=C9F09_21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21530;partial=true;start_range=.,1 PYKB01001259.1 Protein Homology CDS 1 854 . + 2 ID=cds-TGC82286.1;Parent=gene-C9F09_21530;Dbxref=NCBI_GP:TGC82286.1;Name=TGC82286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456342.1;locus_tag=C9F09_21530;partial=true;product=peptidoglycan synthase;protein_id=TGC82286.1;start_range=.,1;transl_table=11 PYKB01001259.1 Genbank gene 920 1729 . + . ID=gene-C9F09_21535;Name=C9F09_21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21535 PYKB01001259.1 Protein Homology CDS 920 1729 . + 0 ID=cds-TGC82287.1;Parent=gene-C9F09_21535;Dbxref=NCBI_GP:TGC82287.1;Name=TGC82287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=C9F09_21535;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=TGC82287.1;transl_table=11 PYKB01001259.1 Genbank pseudogene 1726 1959 . - . ID=gene-C9F09_21540;Name=C9F09_21540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21540;pseudo=true PYKB01001259.1 Protein Homology CDS 1726 1959 . - 0 ID=cds-C9F09_21540;Parent=gene-C9F09_21540;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456340.1;locus_tag=C9F09_21540;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000795.1 1 2024 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000795.1 Genbank region 1 2024 . + . ID=PYKB01000795.1:1..2024;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000795.1 Genbank gene 1 903 . + . ID=gene-C9F09_12350;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=C9F09_12350;partial=true;start_range=.,1 PYKB01000795.1 Protein Homology CDS 1 903 . + 0 ID=cds-TGC92202.1;Parent=gene-C9F09_12350;Dbxref=NCBI_GP:TGC92202.1;Name=TGC92202.1;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination;gbkey=CDS;gene=recC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457389.1;locus_tag=C9F09_12350;partial=true;product=exonuclease V subunit gamma;protein_id=TGC92202.1;start_range=.,1;transl_table=11 PYKB01000795.1 Genbank pseudogene 1081 1986 . + . ID=gene-C9F09_12355;Name=C9F09_12355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12355;pseudo=true PYKB01000795.1 Protein Homology CDS 1081 1986 . + 0 ID=cds-C9F09_12355;Parent=gene-C9F09_12355;Note=degrades small peptides%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=C9F09_12355;product=pitrilysin;pseudo=true;transl_table=11 ##sequence-region PYKB01000654.1 1 2018 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000654.1 Genbank region 1 2018 . + . ID=PYKB01000654.1:1..2018;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000654.1 Genbank gene 1 110 . - . ID=gene-C9F09_09825;Name=C9F09_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09825;partial=true;start_range=.,1 PYKB01000654.1 Protein Homology CDS 1 110 . - 0 ID=cds-TGC94333.1;Parent=gene-C9F09_09825;Dbxref=NCBI_GP:TGC94333.1;Name=TGC94333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747902.1;locus_tag=C9F09_09825;partial=true;product=phage tail protein;protein_id=TGC94333.1;start_range=.,1;transl_table=11 PYKB01000654.1 Genbank gene 131 490 . + . ID=gene-C9F09_09830;Name=C9F09_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09830 PYKB01000654.1 Protein Homology CDS 131 490 . + 0 ID=cds-TGC94331.1;Parent=gene-C9F09_09830;Dbxref=NCBI_GP:TGC94331.1;Name=TGC94331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495382.1;locus_tag=C9F09_09830;product=integrase;protein_id=TGC94331.1;transl_table=11 PYKB01000654.1 Genbank gene 428 616 . - . ID=gene-C9F09_09835;Name=C9F09_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09835 PYKB01000654.1 Protein Homology CDS 428 616 . - 0 ID=cds-TGC94335.1;Parent=gene-C9F09_09835;Dbxref=NCBI_GP:TGC94335.1;Name=TGC94335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001674912.1;locus_tag=C9F09_09835;product=hypothetical protein;protein_id=TGC94335.1;transl_table=11 PYKB01000654.1 Genbank gene 696 815 . - . ID=gene-C9F09_09840;Name=C9F09_09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09840 PYKB01000654.1 Protein Homology CDS 696 815 . - 0 ID=cds-TGC94334.1;Parent=gene-C9F09_09840;Dbxref=NCBI_GP:TGC94334.1;Name=TGC94334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460829.1;locus_tag=C9F09_09840;product=hypothetical protein;protein_id=TGC94334.1;transl_table=11 PYKB01000654.1 Genbank gene 873 1226 . - . ID=gene-C9F09_09845;Name=C9F09_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09845 PYKB01000654.1 Protein Homology CDS 873 1226 . - 0 ID=cds-TGC94332.1;Parent=gene-C9F09_09845;Dbxref=NCBI_GP:TGC94332.1;Name=TGC94332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=C9F09_09845;product=DUF2511 domain-containing protein;protein_id=TGC94332.1;transl_table=11 PYKB01000654.1 Genbank pseudogene 1243 1932 . - . ID=gene-C9F09_09850;Name=C9F09_09850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_09850;pseudo=true PYKB01000654.1 Protein Homology CDS 1243 1932 . - 0 ID=cds-C9F09_09850;Parent=gene-C9F09_09850;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456442.1;locus_tag=C9F09_09850;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000890.1 1 2015 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000890.1 Genbank region 1 2015 . + . ID=PYKB01000890.1:1..2015;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000890.1 Genbank gene 298 543 . - . ID=gene-C9F09_14580;Name=C9F09_14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14580 PYKB01000890.1 Protein Homology CDS 298 543 . - 0 ID=cds-TGC90410.1;Parent=gene-C9F09_14580;Dbxref=NCBI_GP:TGC90410.1;Name=TGC90410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456548.1;locus_tag=C9F09_14580;product=DUF2158 domain-containing protein;protein_id=TGC90410.1;transl_table=11 PYKB01000890.1 Genbank gene 560 1477 . - . ID=gene-C9F09_14585;Name=C9F09_14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14585 PYKB01000890.1 Protein Homology CDS 560 1477 . - 0 ID=cds-TGC90411.1;Parent=gene-C9F09_14585;Dbxref=NCBI_GP:TGC90411.1;Name=TGC90411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=C9F09_14585;product=DUF808 domain-containing protein;protein_id=TGC90411.1;transl_table=11 PYKB01000890.1 Genbank pseudogene 1647 1985 . + . ID=gene-C9F09_14590;Name=C9F09_14590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_14590;pseudo=true PYKB01000890.1 Protein Homology CDS 1647 1985 . + 0 ID=cds-C9F09_14590;Parent=gene-C9F09_14590;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456549.1;locus_tag=C9F09_14590;product=EamA family transporter;pseudo=true;transl_table=11 ##sequence-region PYKB01001726.1 1 2012 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001726.1 Genbank region 1 2012 . + . ID=PYKB01001726.1:1..2012;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001726.1 Genbank gene 337 2012 . + . ID=gene-C9F09_30270;Name=C9F09_30270;end_range=2012,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30270;partial=true PYKB01001726.1 Protein Homology CDS 337 2012 . + 0 ID=cds-TGC71243.1;Parent=gene-C9F09_30270;Dbxref=NCBI_GP:TGC71243.1;Name=TGC71243.1;end_range=2012,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457534.1;locus_tag=C9F09_30270;partial=true;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=TGC71243.1;transl_table=11 ##sequence-region PYKB01001682.1 1 8840 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001682.1 Genbank region 1 8840 . + . ID=PYKB01001682.1:1..8840;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001682.1 Genbank pseudogene 54 797 . - . ID=gene-C9F09_29225;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=pseudogene;gene_synonym=trmC,yfcK;locus_tag=C9F09_29225;pseudo=true PYKB01001682.1 Protein Homology CDS 54 797 . - 0 ID=cds-C9F09_29225;Parent=gene-C9F09_29225;Note=5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=mnmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456921.3;locus_tag=C9F09_29225;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;pseudo=true;transl_table=11 PYKB01001682.1 Genbank gene 897 2111 . + . ID=gene-C9F09_29230;Name=C9F09_29230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29230 PYKB01001682.1 Protein Homology CDS 897 2111 . + 0 ID=cds-TGC72749.1;Parent=gene-C9F09_29230;Dbxref=NCBI_GP:TGC72749.1;Name=TGC72749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456920.1;locus_tag=C9F09_29230;product=beta-ketoacyl-[acyl-carrier-protein] synthase I;protein_id=TGC72749.1;transl_table=11 PYKB01001682.1 Genbank gene 2209 2865 . + . ID=gene-C9F09_29235;Name=C9F09_29235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29235 PYKB01001682.1 Protein Homology CDS 2209 2865 . + 0 ID=cds-TGC72750.1;Parent=gene-C9F09_29235;Dbxref=NCBI_GP:TGC72750.1;Name=TGC72750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=C9F09_29235;product=CPBP family intramembrane metalloprotease;protein_id=TGC72750.1;transl_table=11 PYKB01001682.1 Genbank gene 2932 3450 . - . ID=gene-C9F09_29240;Name=C9F09_29240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29240 PYKB01001682.1 Protein Homology CDS 2932 3450 . - 0 ID=cds-TGC72751.1;Parent=gene-C9F09_29240;Dbxref=NCBI_GP:TGC72751.1;Name=TGC72751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=C9F09_29240;product=DUF3828 domain-containing protein;protein_id=TGC72751.1;transl_table=11 PYKB01001682.1 Genbank gene 3450 3818 . - . ID=gene-C9F09_29245;Name=C9F09_29245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29245 PYKB01001682.1 Protein Homology CDS 3450 3818 . - 0 ID=cds-TGC72752.1;Parent=gene-C9F09_29245;Dbxref=NCBI_GP:TGC72752.1;Name=TGC72752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456917.1;locus_tag=C9F09_29245;product=hypothetical protein;protein_id=TGC72752.1;transl_table=11 PYKB01001682.1 Genbank gene 3987 4235 . - . ID=gene-C9F09_29250;Name=C9F09_29250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29250 PYKB01001682.1 Protein Homology CDS 3987 4235 . - 0 ID=cds-TGC72753.1;Parent=gene-C9F09_29250;Dbxref=NCBI_GP:TGC72753.1;Name=TGC72753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456916.1;locus_tag=C9F09_29250;product=transcriptional regulator;protein_id=TGC72753.1;transl_table=11 PYKB01001682.1 Genbank gene 4408 4782 . + . ID=gene-C9F09_29255;Name=C9F09_29255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29255 PYKB01001682.1 Protein Homology CDS 4408 4782 . + 0 ID=cds-TGC72754.1;Parent=gene-C9F09_29255;Dbxref=NCBI_GP:TGC72754.1;Name=TGC72754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=C9F09_29255;product=hypothetical protein;protein_id=TGC72754.1;transl_table=11 PYKB01001682.1 Genbank gene 4961 6139 . + . ID=gene-C9F09_29260;Name=C9F09_29260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29260 PYKB01001682.1 Protein Homology CDS 4961 6139 . + 0 ID=cds-TGC72755.1;Parent=gene-C9F09_29260;Dbxref=NCBI_GP:TGC72755.1;Name=TGC72755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=C9F09_29260;product=arabinose transporter;protein_id=TGC72755.1;transl_table=11 PYKB01001682.1 Genbank gene 6136 7137 . - . ID=gene-C9F09_29265;Name=C9F09_29265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29265 PYKB01001682.1 Protein Homology CDS 6136 7137 . - 0 ID=cds-TGC72756.1;Parent=gene-C9F09_29265;Dbxref=NCBI_GP:TGC72756.1;Name=TGC72756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456913.1;locus_tag=C9F09_29265;product=flagella biosynthesis regulator;protein_id=TGC72756.1;transl_table=11 PYKB01001682.1 Genbank gene 7241 8377 . + . ID=gene-C9F09_29270;Name=C9F09_29270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29270 PYKB01001682.1 Protein Homology CDS 7241 8377 . + 0 ID=cds-TGC72757.1;Parent=gene-C9F09_29270;Dbxref=NCBI_GP:TGC72757.1;Name=TGC72757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456912.1;locus_tag=C9F09_29270;product=erythronate-4-phosphate dehydrogenase;protein_id=TGC72757.1;transl_table=11 PYKB01001682.1 Genbank pseudogene 8445 8729 . + . ID=gene-C9F09_29275;Name=C9F09_29275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29275;pseudo=true PYKB01001682.1 Protein Homology CDS 8445 8729 . + 0 ID=cds-C9F09_29275;Parent=gene-C9F09_29275;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456911.1;locus_tag=C9F09_29275;product=aspartate-semialdehyde dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKB01001265.1 1 2007 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001265.1 Genbank region 1 2007 . + . ID=PYKB01001265.1:1..2007;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001265.1 Genbank gene 1 182 . - . ID=gene-C9F09_21610;Name=C9F09_21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21610;partial=true;start_range=.,1 PYKB01001265.1 Protein Homology CDS 1 182 . - 0 ID=cds-TGC82250.1;Parent=gene-C9F09_21610;Dbxref=NCBI_GP:TGC82250.1;Name=TGC82250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146266.1;locus_tag=C9F09_21610;partial=true;product=hypothetical protein;protein_id=TGC82250.1;start_range=.,1;transl_table=11 PYKB01001265.1 Genbank gene 314 526 . + . ID=gene-C9F09_21615;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=C9F09_21615 PYKB01001265.1 Protein Homology CDS 314 526 . + 0 ID=cds-TGC82248.1;Parent=gene-C9F09_21615;Dbxref=NCBI_GP:TGC82248.1;Name=TGC82248.1;gbkey=CDS;gene=rpmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457956.1;locus_tag=C9F09_21615;product=50S ribosomal protein L31;protein_id=TGC82248.1;transl_table=11 PYKB01001265.1 Genbank gene 571 1233 . - . ID=gene-C9F09_21620;Name=C9F09_21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21620 PYKB01001265.1 Protein Homology CDS 571 1233 . - 0 ID=cds-TGC82249.1;Parent=gene-C9F09_21620;Dbxref=NCBI_GP:TGC82249.1;Name=TGC82249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457955.1;locus_tag=C9F09_21620;product=TIGR02117 family protein;protein_id=TGC82249.1;transl_table=11 PYKB01001265.1 Genbank pseudogene 1434 1970 . - . ID=gene-C9F09_21625;Name=C9F09_21625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21625;pseudo=true PYKB01001265.1 Protein Homology CDS 1434 1970 . - 0 ID=cds-C9F09_21625;Parent=gene-C9F09_21625;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=C9F09_21625;product=aryl-sulfate sulfotransferase;pseudo=true;transl_table=11 ##sequence-region PYKB01001468.1 1 2006 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001468.1 Genbank region 1 2006 . + . ID=PYKB01001468.1:1..2006;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001468.1 Genbank gene 1 640 . - . ID=gene-C9F09_25580;Name=C9F09_25580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25580;partial=true;start_range=.,1 PYKB01001468.1 Protein Homology CDS 1 640 . - 0 ID=cds-TGC77844.1;Parent=gene-C9F09_25580;Dbxref=NCBI_GP:TGC77844.1;Name=TGC77844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=C9F09_25580;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGC77844.1;start_range=.,1;transl_table=11 PYKB01001468.1 Genbank gene 906 1457 . + . ID=gene-C9F09_25585;Name=C9F09_25585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25585 PYKB01001468.1 Protein Homology CDS 906 1457 . + 0 ID=cds-TGC77845.1;Parent=gene-C9F09_25585;Dbxref=NCBI_GP:TGC77845.1;Name=TGC77845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458442.1;locus_tag=C9F09_25585;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=TGC77845.1;transl_table=11 PYKB01001468.1 Genbank pseudogene 1457 1996 . + . ID=gene-C9F09_25590;Name=C9F09_25590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_25590;pseudo=true PYKB01001468.1 Protein Homology CDS 1457 1996 . + 0 ID=cds-C9F09_25590;Parent=gene-C9F09_25590;Note=involved in potassium efflux%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458443.1;locus_tag=C9F09_25590;product=glutathione-regulated potassium-efflux system protein KefB;pseudo=true;transl_table=11 ##sequence-region PYKB01000957.1 1 2002 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000957.1 Genbank region 1 2002 . + . ID=PYKB01000957.1:1..2002;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000957.1 Genbank gene 1 267 . + . ID=gene-C9F09_15840;Name=C9F09_15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15840;partial=true;start_range=.,1 PYKB01000957.1 Protein Homology CDS 1 267 . + 0 ID=cds-TGC89150.1;Parent=gene-C9F09_15840;Dbxref=NCBI_GP:TGC89150.1;Name=TGC89150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459565.1;locus_tag=C9F09_15840;partial=true;product=SIS domain-containing protein;protein_id=TGC89150.1;start_range=.,1;transl_table=11 PYKB01000957.1 Genbank gene 334 1320 . + . ID=gene-C9F09_15845;Name=C9F09_15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15845 PYKB01000957.1 Protein Homology CDS 334 1320 . + 0 ID=cds-TGC89151.1;Parent=gene-C9F09_15845;Dbxref=NCBI_GP:TGC89151.1;Name=TGC89151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459564.1;locus_tag=C9F09_15845;product=SIS domain-containing protein;protein_id=TGC89151.1;transl_table=11 PYKB01000957.1 Genbank pseudogene 1448 1957 . - . ID=gene-C9F09_15850;Name=C9F09_15850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15850;pseudo=true PYKB01000957.1 Protein Homology CDS 1448 1957 . - 0 ID=cds-C9F09_15850;Parent=gene-C9F09_15850;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459563.1;locus_tag=C9F09_15850;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000901.1 1 1999 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000901.1 Genbank region 1 1999 . + . ID=PYKB01000901.1:1..1999;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000901.1 Genbank gene 83 1999 . - . ID=gene-C9F09_14835;Name=C9F09_14835;end_range=1999,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14835;partial=true PYKB01000901.1 Protein Homology CDS 83 1999 . - 0 ID=cds-TGC90158.1;Parent=gene-C9F09_14835;Dbxref=NCBI_GP:TGC90158.1;Name=TGC90158.1;end_range=1999,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=C9F09_14835;partial=true;product=catalase HPII;protein_id=TGC90158.1;transl_table=11 ##sequence-region PYKB01001388.1 1 1998 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001388.1 Genbank region 1 1998 . + . ID=PYKB01001388.1:1..1998;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001388.1 Genbank gene 1 339 . + . ID=gene-C9F09_23905;Name=C9F09_23905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23905;partial=true;start_range=.,1 PYKB01001388.1 Protein Homology CDS 1 339 . + 0 ID=cds-TGC79717.1;Parent=gene-C9F09_23905;Dbxref=NCBI_GP:TGC79717.1;Name=TGC79717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457379.1;locus_tag=C9F09_23905;partial=true;product=hypothetical protein;protein_id=TGC79717.1;start_range=.,1;transl_table=11 PYKB01001388.1 Genbank gene 339 782 . + . ID=gene-C9F09_23910;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=C9F09_23910 PYKB01001388.1 Protein Homology CDS 339 782 . + 0 ID=cds-TGC79718.1;Parent=gene-C9F09_23910;Dbxref=NCBI_GP:TGC79718.1;Name=TGC79718.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457380.1;locus_tag=C9F09_23910;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=TGC79718.1;transl_table=11 PYKB01001388.1 Genbank gene 1082 1969 . + . ID=gene-C9F09_23915;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=C9F09_23915 PYKB01001388.1 Protein Homology CDS 1082 1969 . + 0 ID=cds-TGC79719.1;Parent=gene-C9F09_23915;Dbxref=NCBI_GP:TGC79719.1;Name=TGC79719.1;gbkey=CDS;gene=rarD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=C9F09_23915;product=EamA family transporter RarD;protein_id=TGC79719.1;transl_table=11 ##sequence-region PYKB01001343.1 1 1987 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001343.1 Genbank region 1 1987 . + . ID=PYKB01001343.1:1..1987;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001343.1 Genbank pseudogene 1 270 . + . ID=gene-C9F09_23130;Name=C9F09_23130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23130;pseudo=true PYKB01001343.1 Protein Homology CDS 1 270 . + 0 ID=cds-C9F09_23130;Parent=gene-C9F09_23130;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458344.1;locus_tag=C9F09_23130;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 PYKB01001343.1 Genbank gene 294 539 . - . ID=gene-C9F09_23135;Name=C9F09_23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23135 PYKB01001343.1 Protein Homology CDS 294 539 . - 0 ID=cds-TGC80687.1;Parent=gene-C9F09_23135;Dbxref=NCBI_GP:TGC80687.1;Name=TGC80687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458343.1;locus_tag=C9F09_23135;product=sulfurtransferase TusA;protein_id=TGC80687.1;transl_table=11 PYKB01001343.1 Genbank gene 709 1374 . + . ID=gene-C9F09_23140;Name=C9F09_23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23140 PYKB01001343.1 Protein Homology CDS 709 1374 . + 0 ID=cds-TGC80688.1;Parent=gene-C9F09_23140;Dbxref=NCBI_GP:TGC80688.1;Name=TGC80688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458342.1;locus_tag=C9F09_23140;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=TGC80688.1;transl_table=11 PYKB01001343.1 Genbank gene 1447 1947 . + . ID=gene-C9F09_23145;Name=C9F09_23145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23145 PYKB01001343.1 Protein Homology CDS 1447 1947 . + 0 ID=cds-TGC80686.1;Parent=gene-C9F09_23145;Dbxref=NCBI_GP:TGC80686.1;Name=TGC80686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458341.1;locus_tag=C9F09_23145;product=hypothetical protein;protein_id=TGC80686.1;transl_table=11 ##sequence-region PYKB01000038.1 1 1986 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000038.1 Genbank region 1 1986 . + . ID=PYKB01000038.1:1..1986;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000038.1 Genbank gene 1 430 . + . ID=gene-C9F09_00455;Name=C9F09_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00455;partial=true;start_range=.,1 PYKB01000038.1 Protein Homology CDS 1 430 . + 1 ID=cds-TGD06708.1;Parent=gene-C9F09_00455;Dbxref=NCBI_GP:TGD06708.1;Name=TGD06708.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456455.1;locus_tag=C9F09_00455;partial=true;product=pyruvate kinase;protein_id=TGD06708.1;start_range=.,1;transl_table=11 PYKB01000038.1 Genbank gene 503 1474 . - . ID=gene-C9F09_00460;Name=msbB;gbkey=Gene;gene=msbB;gene_biotype=protein_coding;locus_tag=C9F09_00460 PYKB01000038.1 Protein Homology CDS 503 1474 . - 0 ID=cds-TGD06709.1;Parent=gene-C9F09_00460;Dbxref=NCBI_GP:TGD06709.1;Name=TGD06709.1;gbkey=CDS;gene=msbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456456.1;locus_tag=C9F09_00460;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=TGD06709.1;transl_table=11 PYKB01000038.1 Genbank gene 1473 1700 . + . ID=gene-C9F09_00465;Name=C9F09_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00465 PYKB01000038.1 Protein Homology CDS 1473 1700 . + 0 ID=cds-TGD06710.1;Parent=gene-C9F09_00465;Dbxref=NCBI_GP:TGD06710.1;Name=TGD06710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749613.1;locus_tag=C9F09_00465;product=hypothetical protein;protein_id=TGD06710.1;transl_table=11 PYKB01000038.1 Genbank gene 1591 1986 . - . ID=gene-C9F09_00470;Name=C9F09_00470;end_range=1986,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00470;partial=true PYKB01000038.1 Protein Homology CDS 1591 1986 . - 0 ID=cds-TGD06711.1;Parent=gene-C9F09_00470;Dbxref=NCBI_GP:TGD06711.1;Name=TGD06711.1;end_range=1986,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=C9F09_00470;partial=true;product=murein DD-endopeptidase MepM;protein_id=TGD06711.1;transl_table=11 ##sequence-region PYKB01001648.1 1 1980 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001648.1 Genbank region 1 1980 . + . ID=PYKB01001648.1:1..1980;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001648.1 Genbank gene 1 868 . - . ID=gene-C9F09_28775;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=C9F09_28775;partial=true;start_range=.,1 PYKB01001648.1 Protein Homology CDS 1 868 . - 0 ID=cds-TGC73578.1;Parent=gene-C9F09_28775;Dbxref=NCBI_GP:TGC73578.1;Name=TGC73578.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457286.1;locus_tag=C9F09_28775;partial=true;product=SPI-1 type III secretion system protein SpaN;protein_id=TGC73578.1;start_range=.,1;transl_table=11 PYKB01001648.1 Genbank gene 868 1311 . - . ID=gene-C9F09_28780;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=C9F09_28780 PYKB01001648.1 Protein Homology CDS 868 1311 . - 0 ID=cds-TGC73579.1;Parent=gene-C9F09_28780;Dbxref=NCBI_GP:TGC73579.1;Name=TGC73579.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457287.1;locus_tag=C9F09_28780;product=SPI-1 type III secretion system protein SpaM;protein_id=TGC73579.1;transl_table=11 PYKB01001648.1 Genbank pseudogene 1289 1918 . - . ID=gene-C9F09_28785;Name=C9F09_28785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28785;pseudo=true PYKB01001648.1 Protein Homology CDS 1289 1918 . - 0 ID=cds-C9F09_28785;Parent=gene-C9F09_28785;Note=invasion protein InvC%3B necessary for efficient entry of S.typhimurium into cultured epithelial cells%3B probable catalytic subunit of a protein translocase%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457288.1;locus_tag=C9F09_28785;product=EscN/YscN/HrcN family type III secretion system ATPase;pseudo=true;transl_table=11 ##sequence-region PYKB01000790.1 1 1979 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000790.1 Genbank region 1 1979 . + . ID=PYKB01000790.1:1..1979;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000790.1 Genbank gene 1 388 . + . ID=gene-C9F09_12255;Name=C9F09_12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12255;partial=true;start_range=.,1 PYKB01000790.1 Protein Homology CDS 1 388 . + 1 ID=cds-TGC92319.1;Parent=gene-C9F09_12255;Dbxref=NCBI_GP:TGC92319.1;Name=TGC92319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458013.1;locus_tag=C9F09_12255;partial=true;product=formate dehydrogenase;protein_id=TGC92319.1;start_range=.,1;transl_table=11 PYKB01000790.1 Genbank gene 401 1303 . + . ID=gene-C9F09_12260;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=C9F09_12260 PYKB01000790.1 Protein Homology CDS 401 1303 . + 0 ID=cds-TGC92320.1;Parent=gene-C9F09_12260;Dbxref=NCBI_GP:TGC92320.1;Name=TGC92320.1;gbkey=CDS;gene=fdxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=C9F09_12260;product=formate dehydrogenase subunit beta;protein_id=TGC92320.1;transl_table=11 PYKB01000790.1 Genbank gene 1300 1935 . + . ID=gene-C9F09_12265;Name=C9F09_12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12265 PYKB01000790.1 Protein Homology CDS 1300 1935 . + 0 ID=cds-TGC92321.1;Parent=gene-C9F09_12265;Dbxref=NCBI_GP:TGC92321.1;Name=TGC92321.1;Note=cytochrome b556(FDO) component%3B heme containing;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458015.1;locus_tag=C9F09_12265;product=formate dehydrogenase cytochrome b556 subunit;protein_id=TGC92321.1;transl_table=11 ##sequence-region PYKB01001196.1 1 1971 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001196.1 Genbank region 1 1971 . + . ID=PYKB01001196.1:1..1971;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001196.1 Genbank pseudogene 51 1118 . + . ID=gene-C9F09_20375;Name=rho;gbkey=Gene;gene=rho;gene_biotype=pseudogene;locus_tag=C9F09_20375;pseudo=true PYKB01001196.1 Protein Homology CDS 51 1118 . + 0 ID=cds-C9F09_20375;Parent=gene-C9F09_20375;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=rho;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457830.1;locus_tag=C9F09_20375;product=transcription termination factor Rho;pseudo=true;transl_table=11 PYKB01001196.1 Genbank gene 1348 1971 . + . ID=gene-C9F09_20380;Name=C9F09_20380;end_range=1971,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20380;partial=true PYKB01001196.1 Protein Homology CDS 1348 1971 . + 0 ID=cds-TGC83611.1;Parent=gene-C9F09_20380;Dbxref=NCBI_GP:TGC83611.1;Name=TGC83611.1;end_range=1971,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457829.1;locus_tag=C9F09_20380;partial=true;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=TGC83611.1;transl_table=11 ##sequence-region PYKB01001446.1 1 8828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001446.1 Genbank region 1 8828 . + . ID=PYKB01001446.1:1..8828;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001446.1 Genbank pseudogene 66 761 . + . ID=gene-C9F09_25090;Name=C9F09_25090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_25090;pseudo=true PYKB01001446.1 Protein Homology CDS 66 761 . + 0 ID=cds-C9F09_25090;Parent=gene-C9F09_25090;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458855.1;locus_tag=C9F09_25090;product=metalloprotease PmbA;pseudo=true;transl_table=11 PYKB01001446.1 Genbank gene 860 1246 . + . ID=gene-C9F09_25095;Name=C9F09_25095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25095 PYKB01001446.1 Protein Homology CDS 860 1246 . + 0 ID=cds-TGC78335.1;Parent=gene-C9F09_25095;Dbxref=NCBI_GP:TGC78335.1;Name=TGC78335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458856.1;locus_tag=C9F09_25095;product=soluble cytochrome b562;protein_id=TGC78335.1;transl_table=11 PYKB01001446.1 Genbank gene 1524 1862 . + . ID=gene-C9F09_25100;Name=C9F09_25100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25100 PYKB01001446.1 Protein Homology CDS 1524 1862 . + 0 ID=cds-TGC78336.1;Parent=gene-C9F09_25100;Dbxref=NCBI_GP:TGC78336.1;Name=TGC78336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458857.1;locus_tag=C9F09_25100;product=glycine dehydrogenase;protein_id=TGC78336.1;transl_table=11 PYKB01001446.1 Genbank gene 1873 2235 . + . ID=gene-C9F09_25105;Name=C9F09_25105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25105 PYKB01001446.1 Protein Homology CDS 1873 2235 . + 0 ID=cds-TGC78337.1;Parent=gene-C9F09_25105;Dbxref=NCBI_GP:TGC78337.1;Name=TGC78337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458858.1;locus_tag=C9F09_25105;product=hypothetical protein;protein_id=TGC78337.1;transl_table=11 PYKB01001446.1 Genbank gene 2235 2537 . + . ID=gene-C9F09_25110;Name=C9F09_25110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25110 PYKB01001446.1 Protein Homology CDS 2235 2537 . + 0 ID=cds-TGC78338.1;Parent=gene-C9F09_25110;Dbxref=NCBI_GP:TGC78338.1;Name=TGC78338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=C9F09_25110;product=cytoplasmic protein;protein_id=TGC78338.1;transl_table=11 PYKB01001446.1 Genbank gene 2560 3336 . + . ID=gene-C9F09_25115;Name=C9F09_25115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25115 PYKB01001446.1 Protein Homology CDS 2560 3336 . + 0 ID=cds-TGC78339.1;Parent=gene-C9F09_25115;Dbxref=NCBI_GP:TGC78339.1;Name=TGC78339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458860.1;locus_tag=C9F09_25115;product=hypothetical protein;protein_id=TGC78339.1;transl_table=11 PYKB01001446.1 Genbank gene 3348 3992 . + . ID=gene-C9F09_25120;Name=C9F09_25120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25120 PYKB01001446.1 Protein Homology CDS 3348 3992 . + 0 ID=cds-TGC78340.1;Parent=gene-C9F09_25120;Dbxref=NCBI_GP:TGC78340.1;Name=TGC78340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=C9F09_25120;product=hypothetical protein;protein_id=TGC78340.1;transl_table=11 PYKB01001446.1 Genbank gene 4051 5184 . + . ID=gene-C9F09_25125;Name=C9F09_25125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25125 PYKB01001446.1 Protein Homology CDS 4051 5184 . + 0 ID=cds-TGC78341.1;Parent=gene-C9F09_25125;Dbxref=NCBI_GP:TGC78341.1;Name=TGC78341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=C9F09_25125;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=TGC78341.1;transl_table=11 PYKB01001446.1 Genbank gene 5168 6286 . + . ID=gene-C9F09_25130;Name=C9F09_25130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25130 PYKB01001446.1 Protein Homology CDS 5168 6286 . + 0 ID=cds-TGC78342.1;Parent=gene-C9F09_25130;Dbxref=NCBI_GP:TGC78342.1;Name=TGC78342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=C9F09_25130;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=TGC78342.1;transl_table=11 PYKB01001446.1 Genbank gene 6283 7023 . + . ID=gene-C9F09_25135;Name=C9F09_25135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25135 PYKB01001446.1 Protein Homology CDS 6283 7023 . + 0 ID=cds-TGC78343.1;Parent=gene-C9F09_25135;Dbxref=NCBI_GP:TGC78343.1;Name=TGC78343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458864.1;locus_tag=C9F09_25135;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=TGC78343.1;transl_table=11 PYKB01001446.1 Genbank gene 6980 8828 . + . ID=gene-C9F09_25140;Name=C9F09_25140;end_range=8828,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25140;partial=true PYKB01001446.1 Protein Homology CDS 6980 8828 . + 0 ID=cds-TGC78344.1;Parent=gene-C9F09_25140;Dbxref=NCBI_GP:TGC78344.1;Name=TGC78344.1;end_range=8828,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458865.1;locus_tag=C9F09_25140;partial=true;product=transcription antiterminator BglG;protein_id=TGC78344.1;transl_table=11 ##sequence-region PYKB01000605.1 1 1970 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000605.1 Genbank region 1 1970 . + . ID=PYKB01000605.1:1..1970;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000605.1 Genbank pseudogene 31 1452 . - . ID=gene-C9F09_08915;Name=C9F09_08915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_08915;pseudo=true PYKB01000605.1 Protein Homology CDS 31 1452 . - 0 ID=cds-C9F09_08915;Parent=gene-C9F09_08915;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455739.1;locus_tag=C9F09_08915;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000355.1 1 1966 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000355.1 Genbank region 1 1966 . + . ID=PYKB01000355.1:1..1966;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000355.1 Genbank gene 1 1966 . - . ID=gene-C9F09_04010;Name=acnA;end_range=1966,.;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=C9F09_04010;partial=true;start_range=.,1 PYKB01000355.1 Protein Homology CDS 1 1966 . - 2 ID=cds-TGD00385.1;Parent=gene-C9F09_04010;Dbxref=NCBI_GP:TGD00385.1;Name=TGD00385.1;end_range=1966,.;gbkey=CDS;gene=acnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=C9F09_04010;partial=true;product=aconitate hydratase AcnA;protein_id=TGD00385.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001455.1 1 1964 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001455.1 Genbank region 1 1964 . + . ID=PYKB01001455.1:1..1964;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001455.1 Genbank gene 1 661 . + . ID=gene-C9F09_25285;Name=C9F09_25285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25285;partial=true;start_range=.,1 PYKB01001455.1 Protein Homology CDS 1 661 . + 1 ID=cds-TGC78138.1;Parent=gene-C9F09_25285;Dbxref=NCBI_GP:TGC78138.1;Name=TGC78138.1;Note=penicillin-insensitive transglycosylase/transpeptidase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=C9F09_25285;partial=true;product=penicillin-binding protein 1C;protein_id=TGC78138.1;start_range=.,1;transl_table=11 PYKB01001455.1 Genbank gene 789 1964 . + . ID=gene-C9F09_25290;Name=C9F09_25290;end_range=1964,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25290;partial=true PYKB01001455.1 Protein Homology CDS 789 1964 . + 0 ID=cds-TGC78139.1;Parent=gene-C9F09_25290;Dbxref=NCBI_GP:TGC78139.1;Name=TGC78139.1;end_range=1964,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461465.1;locus_tag=C9F09_25290;partial=true;product=dimethyl sulfoxide reductase subunit A;protein_id=TGC78139.1;transl_table=11 ##sequence-region PYKB01000486.1 1 1964 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000486.1 Genbank region 1 1964 . + . ID=PYKB01000486.1:1..1964;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000486.1 Genbank gene 1 1277 . - . ID=gene-C9F09_06080;Name=C9F09_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06080;partial=true;start_range=.,1 PYKB01000486.1 Protein Homology CDS 1 1277 . - 0 ID=cds-TGC97960.1;Parent=gene-C9F09_06080;Dbxref=NCBI_GP:TGC97960.1;Name=TGC97960.1;Note=Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=C9F09_06080;partial=true;product=DNA polymerase II;protein_id=TGC97960.1;start_range=.,1;transl_table=11 PYKB01000486.1 Genbank gene 1321 1941 . - . ID=gene-C9F09_06085;Name=C9F09_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06085 PYKB01000486.1 Protein Homology CDS 1321 1941 . - 0 ID=cds-TGC97961.1;Parent=gene-C9F09_06085;Dbxref=NCBI_GP:TGC97961.1;Name=TGC97961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=C9F09_06085;product=multidrug MFS transporter;protein_id=TGC97961.1;transl_table=11 ##sequence-region PYKB01001542.1 1 1961 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001542.1 Genbank region 1 1961 . + . ID=PYKB01001542.1:1..1961;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001542.1 Genbank gene 1 1628 . + . ID=gene-C9F09_26875;Name=C9F09_26875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26875;partial=true;start_range=.,1 PYKB01001542.1 Protein Homology CDS 1 1628 . + 2 ID=cds-TGC76223.1;Parent=gene-C9F09_26875;Dbxref=NCBI_GP:TGC76223.1;Name=TGC76223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457592.1;locus_tag=C9F09_26875;partial=true;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=TGC76223.1;start_range=.,1;transl_table=11 PYKB01001542.1 Genbank pseudogene 1676 1912 . + . ID=gene-C9F09_26880;Name=C9F09_26880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_26880;pseudo=true PYKB01001542.1 Protein Homology CDS 1676 1912 . + 0 ID=cds-C9F09_26880;Parent=gene-C9F09_26880;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457591.1;locus_tag=C9F09_26880;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001609.1 1 1960 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001609.1 Genbank region 1 1960 . + . ID=PYKB01001609.1:1..1960;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001609.1 Genbank gene 4 402 . - . ID=gene-C9F09_28210;Name=C9F09_28210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28210 PYKB01001609.1 Protein Homology CDS 4 402 . - 0 ID=cds-TGC74697.1;Parent=gene-C9F09_28210;Dbxref=NCBI_GP:TGC74697.1;Name=TGC74697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001546677.1;locus_tag=C9F09_28210;product=response regulator;protein_id=TGC74697.1;transl_table=11 PYKB01001609.1 Genbank gene 377 1960 . - . ID=gene-C9F09_28215;Name=ttrS;end_range=1960,.;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=C9F09_28215;partial=true PYKB01001609.1 Protein Homology CDS 377 1960 . - 0 ID=cds-TGC74698.1;Parent=gene-C9F09_28215;Dbxref=NCBI_GP:TGC74698.1;Name=TGC74698.1;end_range=1960,.;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=C9F09_28215;partial=true;product=two-component system sensor histidine kinase TtrS;protein_id=TGC74698.1;transl_table=11 ##sequence-region PYKB01000176.1 1 1956 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000176.1 Genbank region 1 1956 . + . ID=PYKB01000176.1:1..1956;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000176.1 Genbank gene 1 1239 . - . ID=gene-C9F09_01975;Name=C9F09_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01975;partial=true;start_range=.,1 PYKB01000176.1 Protein Homology CDS 1 1239 . - 0 ID=cds-TGD03995.1;Parent=gene-C9F09_01975;Dbxref=NCBI_GP:TGD03995.1;Name=TGD03995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=C9F09_01975;partial=true;product=type III restriction-modification system endonuclease;protein_id=TGD03995.1;start_range=.,1;transl_table=11 PYKB01000176.1 Genbank gene 1249 1884 . - . ID=gene-C9F09_01980;Name=C9F09_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01980 PYKB01000176.1 Protein Homology CDS 1249 1884 . - 0 ID=cds-TGD03994.1;Parent=gene-C9F09_01980;Dbxref=NCBI_GP:TGD03994.1;Name=TGD03994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001691032.1;locus_tag=C9F09_01980;product=type III restriction endonuclease;protein_id=TGD03994.1;transl_table=11 ##sequence-region PYKB01001461.1 1 1955 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001461.1 Genbank region 1 1955 . + . ID=PYKB01001461.1:1..1955;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001461.1 Genbank pseudogene 113 352 . - . ID=gene-C9F09_25440;Name=C9F09_25440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_25440;pseudo=true PYKB01001461.1 Protein Homology CDS 113 352 . - 0 ID=cds-C9F09_25440;Parent=gene-C9F09_25440;Note=represses the lctPRD operon%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458233.1;locus_tag=C9F09_25440;product=transcriptional regulator LldR;pseudo=true;transl_table=11 PYKB01001461.1 Genbank gene 349 1955 . - . ID=gene-C9F09_25445;Name=C9F09_25445;end_range=1955,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25445;partial=true PYKB01001461.1 Protein Homology CDS 349 1955 . - 2 ID=cds-TGC77994.1;Parent=gene-C9F09_25445;Dbxref=NCBI_GP:TGC77994.1;Name=TGC77994.1;end_range=1955,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=C9F09_25445;partial=true;product=L-lactate permease;protein_id=TGC77994.1;transl_table=11 ##sequence-region PYKB01001228.1 1 1953 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001228.1 Genbank region 1 1953 . + . ID=PYKB01001228.1:1..1953;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001228.1 Genbank gene 1 501 . + . ID=gene-C9F09_20770;Name=C9F09_20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20770;partial=true;start_range=.,1 PYKB01001228.1 Protein Homology CDS 1 501 . + 0 ID=cds-TGC82957.1;Parent=gene-C9F09_20770;Dbxref=NCBI_GP:TGC82957.1;Name=TGC82957.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=C9F09_20770;partial=true;product=threonine ammonia-lyase%2C biosynthetic;protein_id=TGC82957.1;start_range=.,1;transl_table=11 PYKB01001228.1 Genbank gene 784 1101 . + . ID=gene-C9F09_20775;Name=C9F09_20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20775 PYKB01001228.1 Protein Homology CDS 784 1101 . + 0 ID=cds-TGC82958.1;Parent=gene-C9F09_20775;Dbxref=NCBI_GP:TGC82958.1;Name=TGC82958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=C9F09_20775;product=cytoplasmic protein;protein_id=TGC82958.1;transl_table=11 PYKB01001228.1 Genbank gene 1098 1439 . + . ID=gene-C9F09_20780;Name=C9F09_20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20780 PYKB01001228.1 Protein Homology CDS 1098 1439 . + 0 ID=cds-TGC82959.1;Parent=gene-C9F09_20780;Dbxref=NCBI_GP:TGC82959.1;Name=TGC82959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=C9F09_20780;product=XRE family transcriptional regulator;protein_id=TGC82959.1;transl_table=11 PYKB01001228.1 Genbank pseudogene 1442 1953 . - . ID=gene-C9F09_20785;Name=C9F09_20785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_20785;pseudo=true PYKB01001228.1 Protein Homology CDS 1442 1953 . - 2 ID=cds-C9F09_20785;Parent=gene-C9F09_20785;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457840.1;locus_tag=C9F09_20785;product=HTH-type transcriptional activator IlvY;pseudo=true;transl_table=11 ##sequence-region PYKB01001753.1 1 1947 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001753.1 Genbank region 1 1947 . + . ID=PYKB01001753.1:1..1947;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001753.1 Genbank gene 1 299 . - . ID=gene-C9F09_30700;Name=C9F09_30700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30700;partial=true;start_range=.,1 PYKB01001753.1 Protein Homology CDS 1 299 . - 0 ID=cds-TGC70389.1;Parent=gene-C9F09_30700;Dbxref=NCBI_GP:TGC70389.1;Name=TGC70389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463228.1;locus_tag=C9F09_30700;partial=true;product=HTH-type transcriptional repressor NsrR;protein_id=TGC70389.1;start_range=.,1;transl_table=11 PYKB01001753.1 Genbank gene 514 1812 . - . ID=gene-C9F09_30705;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=C9F09_30705 PYKB01001753.1 Protein Homology CDS 514 1812 . - 0 ID=cds-TGC70388.1;Parent=gene-C9F09_30705;Dbxref=NCBI_GP:TGC70388.1;Name=TGC70388.1;gbkey=CDS;gene=purA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=C9F09_30705;product=adenylosuccinate synthase;protein_id=TGC70388.1;transl_table=11 ##sequence-region PYKB01001592.1 1 8748 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001592.1 Genbank region 1 8748 . + . ID=PYKB01001592.1:1..8748;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001592.1 Genbank gene 154 963 . + . ID=gene-C9F09_27995;Name=C9F09_27995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27995 PYKB01001592.1 Protein Homology CDS 154 963 . + 0 ID=cds-TGC75036.1;Parent=gene-C9F09_27995;Dbxref=NCBI_GP:TGC75036.1;Name=TGC75036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457060.1;locus_tag=C9F09_27995;product=dimethyl sulfoxide reductase;protein_id=TGC75036.1;transl_table=11 PYKB01001592.1 Genbank gene 963 1826 . + . ID=gene-C9F09_28000;Name=C9F09_28000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28000 PYKB01001592.1 Protein Homology CDS 963 1826 . + 0 ID=cds-TGC75037.1;Parent=gene-C9F09_28000;Dbxref=NCBI_GP:TGC75037.1;Name=TGC75037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457059.1;locus_tag=C9F09_28000;product=ferredoxin;protein_id=TGC75037.1;transl_table=11 PYKB01001592.1 Genbank gene 1947 2378 . + . ID=gene-C9F09_28005;Name=C9F09_28005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28005 PYKB01001592.1 Protein Homology CDS 1947 2378 . + 0 ID=cds-TGC75038.1;Parent=gene-C9F09_28005;Dbxref=NCBI_GP:TGC75038.1;Name=TGC75038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=C9F09_28005;product=nucleoside-diphosphate kinase;protein_id=TGC75038.1;transl_table=11 PYKB01001592.1 Genbank gene 2584 3750 . + . ID=gene-C9F09_28010;Name=C9F09_28010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28010 PYKB01001592.1 Protein Homology CDS 2584 3750 . + 0 ID=cds-TGC75039.1;Parent=gene-C9F09_28010;Dbxref=NCBI_GP:TGC75039.1;Name=TGC75039.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457057.1;locus_tag=C9F09_28010;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=TGC75039.1;transl_table=11 PYKB01001592.1 Genbank gene 3783 3905 . + . ID=gene-C9F09_28015;Name=C9F09_28015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28015 PYKB01001592.1 Protein Homology CDS 3783 3905 . + 0 ID=cds-TGC75045.1;Parent=gene-C9F09_28015;Dbxref=NCBI_GP:TGC75045.1;Name=TGC75045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533207.1;locus_tag=C9F09_28015;product=pilus assembly protein PilW;protein_id=TGC75045.1;transl_table=11 PYKB01001592.1 Genbank gene 4042 5046 . + . ID=gene-C9F09_28020;Name=C9F09_28020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28020 PYKB01001592.1 Protein Homology CDS 4042 5046 . + 0 ID=cds-TGC75040.1;Parent=gene-C9F09_28020;Dbxref=NCBI_GP:TGC75040.1;Name=TGC75040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=C9F09_28020;product=cytoskeleton protein RodZ;protein_id=TGC75040.1;transl_table=11 PYKB01001592.1 Genbank gene 5073 6191 . + . ID=gene-C9F09_28025;Name=C9F09_28025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28025 PYKB01001592.1 Protein Homology CDS 5073 6191 . + 0 ID=cds-TGC75041.1;Parent=gene-C9F09_28025;Dbxref=NCBI_GP:TGC75041.1;Name=TGC75041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=C9F09_28025;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin);protein_id=TGC75041.1;transl_table=11 PYKB01001592.1 Genbank gene 6302 7576 . + . ID=gene-C9F09_28030;Name=C9F09_28030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28030 PYKB01001592.1 Protein Homology CDS 6302 7576 . + 0 ID=cds-TGC75042.1;Parent=gene-C9F09_28030;Dbxref=NCBI_GP:TGC75042.1;Name=TGC75042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120428.1;locus_tag=C9F09_28030;product=histidine--tRNA ligase;protein_id=TGC75042.1;transl_table=11 PYKB01001592.1 Genbank gene 7590 8210 . + . ID=gene-C9F09_28035;Name=C9F09_28035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28035 PYKB01001592.1 Protein Homology CDS 7590 8210 . + 0 ID=cds-TGC75043.1;Parent=gene-C9F09_28035;Dbxref=NCBI_GP:TGC75043.1;Name=TGC75043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457053.1;locus_tag=C9F09_28035;product=hypothetical protein;protein_id=TGC75043.1;transl_table=11 PYKB01001592.1 Genbank gene 8221 8748 . + . ID=gene-C9F09_28040;Name=C9F09_28040;end_range=8748,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28040;partial=true PYKB01001592.1 Protein Homology CDS 8221 8748 . + 0 ID=cds-TGC75044.1;Parent=gene-C9F09_28040;Dbxref=NCBI_GP:TGC75044.1;Name=TGC75044.1;end_range=8748,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457052.1;locus_tag=C9F09_28040;partial=true;product=outer membrane protein assembly factor BamB;protein_id=TGC75044.1;transl_table=11 ##sequence-region PYKB01000353.1 1 1946 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000353.1 Genbank region 1 1946 . + . ID=PYKB01000353.1:1..1946;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000353.1 Genbank gene 1 948 . - . ID=gene-C9F09_03970;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=C9F09_03970;partial=true;start_range=.,1 PYKB01000353.1 Protein Homology CDS 1 948 . - 0 ID=cds-TGD00443.1;Parent=gene-C9F09_03970;Dbxref=NCBI_GP:TGD00443.1;Name=TGD00443.1;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=C9F09_03970;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGD00443.1;start_range=.,1;transl_table=11 PYKB01000353.1 Genbank gene 960 1868 . - . ID=gene-C9F09_03975;Name=C9F09_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03975 PYKB01000353.1 Protein Homology CDS 960 1868 . - 0 ID=cds-TGD00444.1;Parent=gene-C9F09_03975;Dbxref=NCBI_GP:TGD00444.1;Name=TGD00444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=C9F09_03975;product=peptide ABC transporter permease;protein_id=TGD00444.1;transl_table=11 ##sequence-region PYKB01001476.1 1 1945 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001476.1 Genbank region 1 1945 . + . ID=PYKB01001476.1:1..1945;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001476.1 Genbank pseudogene 79 1458 . - . ID=gene-C9F09_25680;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=pseudogene;locus_tag=C9F09_25680;pseudo=true PYKB01001476.1 Protein Homology CDS 79 1458 . - 0 ID=cds-C9F09_25680;Parent=gene-C9F09_25680;Note=functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=asnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455241.1;locus_tag=C9F09_25680;product=asparagine synthase B;pseudo=true;transl_table=11 PYKB01001476.1 Genbank gene 1748 1945 . - . ID=gene-C9F09_25685;Name=C9F09_25685;end_range=1945,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25685;partial=true PYKB01001476.1 Protein Homology CDS 1748 1945 . - 0 ID=cds-TGC77718.1;Parent=gene-C9F09_25685;Dbxref=NCBI_GP:TGC77718.1;Name=TGC77718.1;end_range=1945,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455242.1;locus_tag=C9F09_25685;partial=true;product=UMP phosphatase;protein_id=TGC77718.1;transl_table=11 ##sequence-region PYKB01001636.1 1 1941 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001636.1 Genbank region 1 1941 . + . ID=PYKB01001636.1:1..1941;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001636.1 Genbank pseudogene 1 1941 . + . ID=gene-C9F09_28600;Name=recC;gbkey=Gene;gene=recC;gene_biotype=pseudogene;locus_tag=C9F09_28600;pseudo=true PYKB01001636.1 Protein Homology CDS 1 1941 . + 0 ID=cds-C9F09_28600;Parent=gene-C9F09_28600;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;gene=recC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457389.1;locus_tag=C9F09_28600;product=exodeoxyribonuclease V subunit gamma;pseudo=true;transl_table=11 ##sequence-region PYKB01001002.1 1 1932 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001002.1 Genbank region 1 1932 . + . ID=PYKB01001002.1:1..1932;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001002.1 Genbank gene 1 1932 . + . ID=gene-C9F09_16750;Name=C9F09_16750;end_range=1932,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16750;partial=true;start_range=.,1 PYKB01001002.1 Protein Homology CDS 1 1932 . + 2 ID=cds-TGC88186.1;Parent=gene-C9F09_16750;Dbxref=NCBI_GP:TGC88186.1;Name=TGC88186.1;end_range=1932,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462396.3;locus_tag=C9F09_16750;partial=true;product=carboxypeptidase/penicillin-binding protein 1A;protein_id=TGC88186.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001119.1 1 1931 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001119.1 Genbank region 1 1931 . + . ID=PYKB01001119.1:1..1931;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001119.1 Genbank gene 1 246 . + . ID=gene-C9F09_18810;Name=C9F09_18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18810;partial=true;start_range=.,1 PYKB01001119.1 Protein Homology CDS 1 246 . + 0 ID=cds-TGC85536.1;Parent=gene-C9F09_18810;Dbxref=NCBI_GP:TGC85536.1;Name=TGC85536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458937.1;locus_tag=C9F09_18810;partial=true;product=beta-aspartyl-peptidase;protein_id=TGC85536.1;start_range=.,1;transl_table=11 PYKB01001119.1 Genbank gene 365 1273 . + . ID=gene-C9F09_18815;Name=C9F09_18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18815 PYKB01001119.1 Protein Homology CDS 365 1273 . + 0 ID=cds-TGC85537.1;Parent=gene-C9F09_18815;Dbxref=NCBI_GP:TGC85537.1;Name=TGC85537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458936.1;locus_tag=C9F09_18815;product=LysR family transcriptional regulator;protein_id=TGC85537.1;transl_table=11 PYKB01001119.1 Genbank gene 1305 1931 . - . ID=gene-C9F09_18820;Name=C9F09_18820;end_range=1931,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18820;partial=true PYKB01001119.1 Protein Homology CDS 1305 1931 . - 0 ID=cds-TGC85538.1;Parent=gene-C9F09_18820;Dbxref=NCBI_GP:TGC85538.1;Name=TGC85538.1;end_range=1931,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000683242.1;locus_tag=C9F09_18820;partial=true;product=aspartate racemase;protein_id=TGC85538.1;transl_table=11 ##sequence-region PYKB01000331.1 1 1918 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000331.1 Genbank region 1 1918 . + . ID=PYKB01000331.1:1..1918;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000331.1 Genbank gene 1 1045 . - . ID=gene-C9F09_03670;Name=C9F09_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03670;partial=true;start_range=.,1 PYKB01000331.1 Protein Homology CDS 1 1045 . - 0 ID=cds-TGD00929.1;Parent=gene-C9F09_03670;Dbxref=NCBI_GP:TGD00929.1;Name=TGD00929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=C9F09_03670;partial=true;product=membrane-bound lytic murein transglycosylase MltF;protein_id=TGD00929.1;start_range=.,1;transl_table=11 PYKB01000331.1 Genbank gene 1046 1234 . - . ID=gene-C9F09_03675;Name=C9F09_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03675 PYKB01000331.1 Protein Homology CDS 1046 1234 . - 0 ID=cds-TGD00930.1;Parent=gene-C9F09_03675;Dbxref=NCBI_GP:TGD00930.1;Name=TGD00930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461501.1;locus_tag=C9F09_03675;product=hypothetical protein;protein_id=TGD00930.1;transl_table=11 PYKB01000331.1 Genbank gene 1301 1918 . + . ID=gene-C9F09_03680;Name=C9F09_03680;end_range=1918,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03680;partial=true PYKB01000331.1 Protein Homology CDS 1301 1918 . + 0 ID=cds-TGD00931.1;Parent=gene-C9F09_03680;Dbxref=NCBI_GP:TGD00931.1;Name=TGD00931.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;end_range=1918,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=C9F09_03680;partial=true;product=phosphoribosylformylglycinamidine synthase;protein_id=TGD00931.1;transl_table=11 ##sequence-region PYKB01000732.1 1 1911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000732.1 Genbank region 1 1911 . + . ID=PYKB01000732.1:1..1911;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000732.1 Genbank gene 1 747 . - . ID=gene-C9F09_11255;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=C9F09_11255;partial=true;start_range=.,1 PYKB01000732.1 Protein Homology CDS 1 747 . - 0 ID=cds-TGC93253.1;Parent=gene-C9F09_11255;Dbxref=NCBI_GP:TGC93253.1;Name=TGC93253.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=C9F09_11255;partial=true;product=type III secretion system inner membrane ring protein PrgH;protein_id=TGC93253.1;start_range=.,1;transl_table=11 PYKB01000732.1 Genbank gene 1063 1911 . + . ID=gene-C9F09_11260;Name=C9F09_11260;end_range=1911,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11260;partial=true PYKB01000732.1 Protein Homology CDS 1063 1911 . + 0 ID=cds-TGC93252.1;Parent=gene-C9F09_11260;Dbxref=NCBI_GP:TGC93252.1;Name=TGC93252.1;end_range=1911,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=C9F09_11260;partial=true;product=transcriptional regulator HilD;protein_id=TGC93252.1;transl_table=11 ##sequence-region PYKB01001213.1 1 1910 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001213.1 Genbank region 1 1910 . + . ID=PYKB01001213.1:1..1910;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001213.1 Genbank gene 109 657 . - . ID=gene-C9F09_20650;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=C9F09_20650 PYKB01001213.1 Protein Homology CDS 109 657 . - 0 ID=cds-TGC83088.1;Parent=gene-C9F09_20650;Dbxref=NCBI_GP:TGC83088.1;Name=TGC83088.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=C9F09_20650;product=ribosome maturation factor RimM;protein_id=TGC83088.1;transl_table=11 PYKB01001213.1 Genbank gene 676 924 . - . ID=gene-C9F09_20655;Name=C9F09_20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20655 PYKB01001213.1 Protein Homology CDS 676 924 . - 0 ID=cds-TGC83087.1;Parent=gene-C9F09_20655;Dbxref=NCBI_GP:TGC83087.1;Name=TGC83087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311499.1;locus_tag=C9F09_20655;product=30S ribosomal protein S16;protein_id=TGC83087.1;transl_table=11 PYKB01001213.1 Genbank pseudogene 1268 1849 . - . ID=gene-C9F09_20660;Name=C9F09_20660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_20660;pseudo=true PYKB01001213.1 Protein Homology CDS 1268 1849 . - 0 ID=cds-C9F09_20660;Parent=gene-C9F09_20660;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=C9F09_20660;product=signal recognition particle protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001127.1 1 1901 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001127.1 Genbank region 1 1901 . + . ID=PYKB01001127.1:1..1901;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001127.1 Genbank pseudogene 1 80 . + . ID=gene-C9F09_18990;Name=C9F09_18990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18990;pseudo=true PYKB01001127.1 Protein Homology CDS 1 80 . + 2 ID=cds-C9F09_18990;Parent=gene-C9F09_18990;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010948761.1;locus_tag=C9F09_18990;product=DUF2497 domain-containing protein;pseudo=true;transl_table=11 PYKB01001127.1 Genbank gene 141 1889 . + . ID=gene-C9F09_18995;Name=C9F09_18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18995 PYKB01001127.1 GeneMarkS+ CDS 141 1889 . + 0 ID=cds-TGC85336.1;Parent=gene-C9F09_18995;Dbxref=NCBI_GP:TGC85336.1;Name=TGC85336.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_18995;product=pilin outer membrane usher protein SafC;protein_id=TGC85336.1;transl_table=11 ##sequence-region PYKB01000307.1 1 1901 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000307.1 Genbank region 1 1901 . + . ID=PYKB01000307.1:1..1901;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000307.1 Genbank gene 87 563 . + . ID=gene-C9F09_03445;Name=C9F09_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03445 PYKB01000307.1 Protein Homology CDS 87 563 . + 0 ID=cds-TGD01412.1;Parent=gene-C9F09_03445;Dbxref=NCBI_GP:TGD01412.1;Name=TGD01412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459204.1;locus_tag=C9F09_03445;product=fimbrial protein;protein_id=TGD01412.1;transl_table=11 PYKB01000307.1 Genbank gene 563 1093 . + . ID=gene-C9F09_03450;Name=C9F09_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03450 PYKB01000307.1 Protein Homology CDS 563 1093 . + 0 ID=cds-TGD01413.1;Parent=gene-C9F09_03450;Dbxref=NCBI_GP:TGD01413.1;Name=TGD01413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=C9F09_03450;product=fimbrial protein;protein_id=TGD01413.1;transl_table=11 PYKB01000307.1 Genbank gene 1093 1901 . + . ID=gene-C9F09_03455;Name=C9F09_03455;end_range=1901,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03455;partial=true PYKB01000307.1 Protein Homology CDS 1093 1901 . + 0 ID=cds-TGD01414.1;Parent=gene-C9F09_03455;Dbxref=NCBI_GP:TGD01414.1;Name=TGD01414.1;end_range=1901,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=C9F09_03455;partial=true;product=DUF2544 domain-containing protein;protein_id=TGD01414.1;transl_table=11 ##sequence-region PYKB01000560.1 1 8688 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000560.1 Genbank region 1 8688 . + . ID=PYKB01000560.1:1..8688;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000560.1 Genbank gene 1 1377 . - . ID=gene-C9F09_07745;Name=C9F09_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07745;partial=true;start_range=.,1 PYKB01000560.1 Protein Homology CDS 1 1377 . - 0 ID=cds-TGC96264.1;Parent=gene-C9F09_07745;Dbxref=NCBI_GP:TGC96264.1;Name=TGC96264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460643.3;locus_tag=C9F09_07745;partial=true;product=hypothetical protein;protein_id=TGC96264.1;start_range=.,1;transl_table=11 PYKB01000560.1 Genbank gene 1520 1834 . - . ID=gene-C9F09_07750;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=C9F09_07750 PYKB01000560.1 Protein Homology CDS 1520 1834 . - 0 ID=cds-TGC96256.1;Parent=gene-C9F09_07750;Dbxref=NCBI_GP:TGC96256.1;Name=TGC96256.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=C9F09_07750;product=thiosulfate sulfurtransferase PspE;protein_id=TGC96256.1;transl_table=11 PYKB01000560.1 Genbank gene 1910 2128 . - . ID=gene-C9F09_07755;Name=C9F09_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07755 PYKB01000560.1 Protein Homology CDS 1910 2128 . - 0 ID=cds-TGC96257.1;Parent=gene-C9F09_07755;Dbxref=NCBI_GP:TGC96257.1;Name=TGC96257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455816.1;locus_tag=C9F09_07755;product=phage shock protein D;protein_id=TGC96257.1;transl_table=11 PYKB01000560.1 Genbank gene 2151 2510 . - . ID=gene-C9F09_07760;Name=C9F09_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07760 PYKB01000560.1 Protein Homology CDS 2151 2510 . - 0 ID=cds-TGC96258.1;Parent=gene-C9F09_07760;Dbxref=NCBI_GP:TGC96258.1;Name=TGC96258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=C9F09_07760;product=envelope stress response membrane protein PspC;protein_id=TGC96258.1;transl_table=11 PYKB01000560.1 Genbank gene 2510 2734 . - . ID=gene-C9F09_07765;Name=C9F09_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07765 PYKB01000560.1 Protein Homology CDS 2510 2734 . - 0 ID=cds-TGC96259.1;Parent=gene-C9F09_07765;Dbxref=NCBI_GP:TGC96259.1;Name=TGC96259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455814.1;locus_tag=C9F09_07765;product=envelope stress response membrane protein PspB;protein_id=TGC96259.1;transl_table=11 PYKB01000560.1 Genbank gene 2794 3462 . - . ID=gene-C9F09_07770;Name=C9F09_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07770 PYKB01000560.1 Protein Homology CDS 2794 3462 . - 0 ID=cds-TGC96260.1;Parent=gene-C9F09_07770;Dbxref=NCBI_GP:TGC96260.1;Name=TGC96260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455813.1;locus_tag=C9F09_07770;product=phage shock protein PspA;protein_id=TGC96260.1;transl_table=11 PYKB01000560.1 Genbank gene 3633 4613 . + . ID=gene-C9F09_07775;Name=C9F09_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07775 PYKB01000560.1 Protein Homology CDS 3633 4613 . + 0 ID=cds-TGC96265.1;Parent=gene-C9F09_07775;Dbxref=NCBI_GP:TGC96265.1;Name=TGC96265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=C9F09_07775;product=phage shock protein operon transcriptional activator;protein_id=TGC96265.1;transl_table=11 PYKB01000560.1 Genbank gene 4725 6374 . + . ID=gene-C9F09_07780;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=C9F09_07780 PYKB01000560.1 Protein Homology CDS 4725 6374 . + 0 ID=cds-TGC96266.1;Parent=gene-C9F09_07780;Dbxref=NCBI_GP:TGC96266.1;Name=TGC96266.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=C9F09_07780;product=peptide ABC transporter substrate-binding protein SapA;protein_id=TGC96266.1;transl_table=11 PYKB01000560.1 Genbank gene 6371 7336 . + . ID=gene-C9F09_07785;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=C9F09_07785 PYKB01000560.1 Protein Homology CDS 6371 7336 . + 0 ID=cds-TGC96261.1;Parent=gene-C9F09_07785;Dbxref=NCBI_GP:TGC96261.1;Name=TGC96261.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=C9F09_07785;product=peptide ABC transporter permease SapB;protein_id=TGC96261.1;transl_table=11 PYKB01000560.1 Genbank gene 7323 8213 . + . ID=gene-C9F09_07790;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=C9F09_07790 PYKB01000560.1 Protein Homology CDS 7323 8213 . + 0 ID=cds-TGC96262.1;Parent=gene-C9F09_07790;Dbxref=NCBI_GP:TGC96262.1;Name=TGC96262.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455802.1;locus_tag=C9F09_07790;product=peptide ABC transporter permease SapC;protein_id=TGC96262.1;transl_table=11 PYKB01000560.1 Genbank gene 8213 8688 . + . ID=gene-C9F09_07795;Name=sapD;end_range=8688,.;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=C9F09_07795;partial=true PYKB01000560.1 Protein Homology CDS 8213 8688 . + 0 ID=cds-TGC96263.1;Parent=gene-C9F09_07795;Dbxref=NCBI_GP:TGC96263.1;Name=TGC96263.1;end_range=8688,.;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455801.1;locus_tag=C9F09_07795;partial=true;product=peptide ABC transporter ATP-binding protein SapD;protein_id=TGC96263.1;transl_table=11 ##sequence-region PYKB01000597.1 1 1899 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000597.1 Genbank region 1 1899 . + . ID=PYKB01000597.1:1..1899;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000597.1 Genbank gene 1 328 . - . ID=gene-C9F09_08700;Name=C9F09_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08700;partial=true;start_range=.,1 PYKB01000597.1 Protein Homology CDS 1 328 . - 0 ID=cds-TGC95376.1;Parent=gene-C9F09_08700;Dbxref=NCBI_GP:TGC95376.1;Name=TGC95376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457927.1;locus_tag=C9F09_08700;partial=true;product=biotin operon repressor;protein_id=TGC95376.1;start_range=.,1;transl_table=11 PYKB01000597.1 Genbank gene 325 1353 . - . ID=gene-C9F09_08705;Name=C9F09_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08705 PYKB01000597.1 Protein Homology CDS 325 1353 . - 0 ID=cds-TGC95377.1;Parent=gene-C9F09_08705;Dbxref=NCBI_GP:TGC95377.1;Name=TGC95377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=C9F09_08705;product=UDP-N-acetylmuramate dehydrogenase;protein_id=TGC95377.1;transl_table=11 PYKB01000597.1 Genbank gene 1535 1650 . - . ID=gene-C9F09_08710;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F09_08710 PYKB01000597.1 cmsearch rRNA 1535 1650 . - . ID=rna-C9F09_08710;Parent=gene-C9F09_08710;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00001,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_08710;product=5S ribosomal RNA PYKB01000597.1 cmsearch exon 1535 1650 . - . ID=exon-C9F09_08710-1;Parent=rna-C9F09_08710;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00001,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_08710;product=5S ribosomal RNA PYKB01000597.1 Genbank gene 1835 1899 . - . ID=gene-C9F09_08715;Name=C9F09_08715;end_range=1899,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F09_08715;partial=true PYKB01000597.1 Genbank rRNA 1835 1899 . - . ID=rna-C9F09_08715;Parent=gene-C9F09_08715;end_range=1899,.;gbkey=rRNA;locus_tag=C9F09_08715;partial=true;product=23S ribosomal RNA PYKB01000597.1 Genbank exon 1835 1899 . - . ID=exon-C9F09_08715-1;Parent=rna-C9F09_08715;end_range=1899,.;gbkey=rRNA;locus_tag=C9F09_08715;partial=true;product=23S ribosomal RNA ##sequence-region PYKB01001235.1 1 1897 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001235.1 Genbank region 1 1897 . + . ID=PYKB01001235.1:1..1897;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001235.1 Genbank pseudogene 26 529 . + . ID=gene-C9F09_21015;Name=C9F09_21015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21015;pseudo=true PYKB01001235.1 Protein Homology CDS 26 529 . + 0 ID=cds-C9F09_21015;Parent=gene-C9F09_21015;Note=catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458811.3;locus_tag=C9F09_21015;product=isovaleryl-CoA dehydrogenase;pseudo=true;transl_table=11 PYKB01001235.1 Genbank gene 574 894 . - . ID=gene-C9F09_21020;Name=C9F09_21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21020 PYKB01001235.1 Protein Homology CDS 574 894 . - 0 ID=cds-TGC82738.1;Parent=gene-C9F09_21020;Dbxref=NCBI_GP:TGC82738.1;Name=TGC82738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463239.1;locus_tag=C9F09_21020;product=hypothetical protein;protein_id=TGC82738.1;transl_table=11 PYKB01001235.1 Genbank gene 980 1309 . - . ID=gene-C9F09_21025;Name=C9F09_21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21025 PYKB01001235.1 Protein Homology CDS 980 1309 . - 0 ID=cds-TGC82739.1;Parent=gene-C9F09_21025;Dbxref=NCBI_GP:TGC82739.1;Name=TGC82739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=C9F09_21025;product=biofilm peroxide resistance protein BsmA;protein_id=TGC82739.1;transl_table=11 PYKB01001235.1 Genbank gene 1493 1897 . + . ID=gene-C9F09_21030;Name=C9F09_21030;end_range=1897,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21030;partial=true PYKB01001235.1 Protein Homology CDS 1493 1897 . + 0 ID=cds-TGC82740.1;Parent=gene-C9F09_21030;Dbxref=NCBI_GP:TGC82740.1;Name=TGC82740.1;end_range=1897,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458814.1;locus_tag=C9F09_21030;partial=true;product=esterase;protein_id=TGC82740.1;transl_table=11 ##sequence-region PYKB01001108.1 1 1896 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001108.1 Genbank region 1 1896 . + . ID=PYKB01001108.1:1..1896;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001108.1 Genbank gene 1 366 . - . ID=gene-C9F09_18635;Name=C9F09_18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18635;partial=true;start_range=.,1 PYKB01001108.1 Protein Homology CDS 1 366 . - 0 ID=cds-TGC85753.1;Parent=gene-C9F09_18635;Dbxref=NCBI_GP:TGC85753.1;Name=TGC85753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=C9F09_18635;partial=true;product=microcompartment protein;protein_id=TGC85753.1;start_range=.,1;transl_table=11 PYKB01001108.1 Genbank gene 370 645 . - . ID=gene-C9F09_18640;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=C9F09_18640 PYKB01001108.1 Protein Homology CDS 370 645 . - 0 ID=cds-TGC85751.1;Parent=gene-C9F09_18640;Dbxref=NCBI_GP:TGC85751.1;Name=TGC85751.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456595.1;locus_tag=C9F09_18640;product=propanediol utilization microcompartment protein PduA;protein_id=TGC85751.1;transl_table=11 PYKB01001108.1 Genbank gene 664 1014 . - . ID=gene-C9F09_18645;Name=C9F09_18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18645 PYKB01001108.1 Protein Homology CDS 664 1014 . - 0 ID=cds-TGC85752.1;Parent=gene-C9F09_18645;Dbxref=NCBI_GP:TGC85752.1;Name=TGC85752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=C9F09_18645;product=propanediol dehydratase;protein_id=TGC85752.1;transl_table=11 PYKB01001108.1 Genbank pseudogene 1004 1828 . - . ID=gene-C9F09_18650;Name=C9F09_18650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18650;pseudo=true PYKB01001108.1 Protein Homology CDS 1004 1828 . - 0 ID=cds-C9F09_18650;Parent=gene-C9F09_18650;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456593.1;locus_tag=C9F09_18650;product=diol dehydratase reactivase subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKB01001149.1 1 1896 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001149.1 Genbank region 1 1896 . + . ID=PYKB01001149.1:1..1896;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001149.1 Genbank gene 1 1896 . + . ID=gene-C9F09_19415;Name=C9F09_19415;end_range=1896,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19415;partial=true;start_range=.,1 PYKB01001149.1 Protein Homology CDS 1 1896 . + 0 ID=cds-TGC84757.1;Parent=gene-C9F09_19415;Dbxref=NCBI_GP:TGC84757.1;Name=TGC84757.1;end_range=1896,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463076.1;locus_tag=C9F09_19415;partial=true;product=phage tail tape measure protein;protein_id=TGC84757.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001349.1 1 1892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001349.1 Genbank region 1 1892 . + . ID=PYKB01001349.1:1..1892;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001349.1 Genbank gene 19 222 . - . ID=gene-C9F09_23205;Name=C9F09_23205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23205 PYKB01001349.1 Protein Homology CDS 19 222 . - 0 ID=cds-TGC80520.1;Parent=gene-C9F09_23205;Dbxref=NCBI_GP:TGC80520.1;Name=TGC80520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121711.1;locus_tag=C9F09_23205;product=hypothetical protein;protein_id=TGC80520.1;transl_table=11 PYKB01001349.1 Genbank gene 377 1892 . - . ID=gene-C9F09_23210;Name=C9F09_23210;end_range=1892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23210;partial=true PYKB01001349.1 Protein Homology CDS 377 1892 . - 1 ID=cds-TGC80521.1;Parent=gene-C9F09_23210;Dbxref=NCBI_GP:TGC80521.1;Name=TGC80521.1;end_range=1892,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=C9F09_23210;partial=true;product=primosomal protein N';protein_id=TGC80521.1;transl_table=11 ##sequence-region PYKB01000847.1 1 1890 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000847.1 Genbank region 1 1890 . + . ID=PYKB01000847.1:1..1890;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000847.1 Genbank gene 49 1071 . + . ID=gene-C9F09_13480;Name=C9F09_13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13480 PYKB01000847.1 Protein Homology CDS 49 1071 . + 0 ID=cds-TGC91307.1;Parent=gene-C9F09_13480;Dbxref=NCBI_GP:TGC91307.1;Name=TGC91307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000820614.1;locus_tag=C9F09_13480;product=hypothetical protein;protein_id=TGC91307.1;transl_table=11 PYKB01000847.1 Genbank gene 1068 1890 . + . ID=gene-C9F09_13485;Name=C9F09_13485;end_range=1890,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13485;partial=true PYKB01000847.1 Protein Homology CDS 1068 1890 . + 0 ID=cds-TGC91306.1;Parent=gene-C9F09_13485;Dbxref=NCBI_GP:TGC91306.1;Name=TGC91306.1;end_range=1890,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458336.1;locus_tag=C9F09_13485;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGC91306.1;transl_table=11 ##sequence-region PYKB01001096.1 1 1876 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001096.1 Genbank region 1 1876 . + . ID=PYKB01001096.1:1..1876;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001096.1 Genbank gene 1 1132 . - . ID=gene-C9F09_18380;Name=C9F09_18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18380;partial=true;start_range=.,1 PYKB01001096.1 Protein Homology CDS 1 1132 . - 0 ID=cds-TGC86149.1;Parent=gene-C9F09_18380;Dbxref=NCBI_GP:TGC86149.1;Name=TGC86149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456672.1;locus_tag=C9F09_18380;partial=true;product=multidrug transporter subunit MdtA;protein_id=TGC86149.1;start_range=.,1;transl_table=11 PYKB01001096.1 Genbank pseudogene 1573 1876 . - . ID=gene-C9F09_18385;Name=C9F09_18385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_18385;pseudo=true PYKB01001096.1 Protein Homology CDS 1573 1876 . - 1 ID=cds-C9F09_18385;Parent=gene-C9F09_18385;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456671.1;locus_tag=C9F09_18385;product=molecular chaperone;pseudo=true;transl_table=11 ##sequence-region PYKB01000672.1 1 1875 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000672.1 Genbank region 1 1875 . + . ID=PYKB01000672.1:1..1875;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000672.1 Genbank gene 1 1875 . + . ID=gene-C9F09_10090;Name=C9F09_10090;end_range=1875,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10090;partial=true;start_range=.,1 PYKB01000672.1 Protein Homology CDS 1 1875 . + 1 ID=cds-TGC94047.1;Parent=gene-C9F09_10090;Dbxref=NCBI_GP:TGC94047.1;Name=TGC94047.1;end_range=1875,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=C9F09_10090;partial=true;product=ATP-dependent chaperone ClpB;protein_id=TGC94047.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000348.1 1 1874 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000348.1 Genbank region 1 1874 . + . ID=PYKB01000348.1:1..1874;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000348.1 Genbank gene 1 416 . - . ID=gene-C9F09_03910;Name=C9F09_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03910;partial=true;start_range=.,1 PYKB01000348.1 Protein Homology CDS 1 416 . - 0 ID=cds-TGD00558.1;Parent=gene-C9F09_03910;Dbxref=NCBI_GP:TGD00558.1;Name=TGD00558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=C9F09_03910;partial=true;product=hypothetical protein;protein_id=TGD00558.1;start_range=.,1;transl_table=11 PYKB01000348.1 Genbank gene 413 1072 . - . ID=gene-C9F09_03915;Name=C9F09_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03915 PYKB01000348.1 Protein Homology CDS 413 1072 . - 0 ID=cds-TGD00559.1;Parent=gene-C9F09_03915;Dbxref=NCBI_GP:TGD00559.1;Name=TGD00559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=C9F09_03915;product=glutamine ABC transporter permease GlnP;protein_id=TGD00559.1;transl_table=11 PYKB01000348.1 Genbank gene 1216 1874 . - . ID=gene-C9F09_03920;Name=C9F09_03920;end_range=1874,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03920;partial=true PYKB01000348.1 Protein Homology CDS 1216 1874 . - 2 ID=cds-TGD00560.1;Parent=gene-C9F09_03920;Dbxref=NCBI_GP:TGD00560.1;Name=TGD00560.1;end_range=1874,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=C9F09_03920;partial=true;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=TGD00560.1;transl_table=11 ##sequence-region PYKB01001156.1 1 1872 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001156.1 Genbank region 1 1872 . + . ID=PYKB01001156.1:1..1872;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001156.1 Genbank gene 1 235 . - . ID=gene-C9F09_19550;Name=C9F09_19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19550;partial=true;start_range=.,1 PYKB01001156.1 Protein Homology CDS 1 235 . - 0 ID=cds-TGC84585.1;Parent=gene-C9F09_19550;Dbxref=NCBI_GP:TGC84585.1;Name=TGC84585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455187.1;locus_tag=C9F09_19550;partial=true;product=molecular chaperone;protein_id=TGC84585.1;start_range=.,1;transl_table=11 PYKB01001156.1 Genbank gene 568 1872 . - . ID=gene-C9F09_19555;Name=C9F09_19555;end_range=1872,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19555;partial=true PYKB01001156.1 Protein Homology CDS 568 1872 . - 0 ID=cds-TGC84586.1;Parent=gene-C9F09_19555;Dbxref=NCBI_GP:TGC84586.1;Name=TGC84586.1;end_range=1872,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455864.1;locus_tag=C9F09_19555;partial=true;product=alkyl hydroperoxide reductase subunit F;protein_id=TGC84586.1;transl_table=11 ##sequence-region PYKB01000640.1 1 8475 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000640.1 Genbank region 1 8475 . + . ID=PYKB01000640.1:1..8475;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000640.1 Genbank gene 457 533 . + . ID=gene-C9F09_09580;Name=C9F09_09580;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_09580 PYKB01000640.1 tRNAscan-SE tRNA 457 533 . + . ID=rna-C9F09_09580;Parent=gene-C9F09_09580;anticodon=(pos:491..493);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_09580;product=tRNA-Arg PYKB01000640.1 tRNAscan-SE exon 457 533 . + . ID=exon-C9F09_09580-1;Parent=rna-C9F09_09580;anticodon=(pos:491..493);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_09580;product=tRNA-Arg PYKB01000640.1 Genbank gene 1288 1632 . - . ID=gene-C9F09_09585;Name=C9F09_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09585 PYKB01000640.1 Protein Homology CDS 1288 1632 . - 0 ID=cds-TGC94536.1;Parent=gene-C9F09_09585;Dbxref=NCBI_GP:TGC94536.1;Name=TGC94536.1;Note=PliC%3B periplasmic lysozyme inhibitor of c-type lysozyme;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=C9F09_09585;product=lysozyme inhibitor;protein_id=TGC94536.1;transl_table=11 PYKB01000640.1 Genbank gene 2010 2135 . + . ID=gene-C9F09_09590;Name=C9F09_09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09590 PYKB01000640.1 Protein Homology CDS 2010 2135 . + 0 ID=cds-TGC94537.1;Parent=gene-C9F09_09590;Dbxref=NCBI_GP:TGC94537.1;Name=TGC94537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456262.1;locus_tag=C9F09_09590;product=hypothetical protein;protein_id=TGC94537.1;transl_table=11 PYKB01000640.1 Genbank gene 2335 2607 . + . ID=gene-C9F09_09595;Name=C9F09_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09595 PYKB01000640.1 Protein Homology CDS 2335 2607 . + 0 ID=cds-TGC94538.1;Parent=gene-C9F09_09595;Dbxref=NCBI_GP:TGC94538.1;Name=TGC94538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=C9F09_09595;product=hypothetical protein;protein_id=TGC94538.1;transl_table=11 PYKB01000640.1 Genbank gene 2756 3226 . + . ID=gene-C9F09_09600;Name=C9F09_09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09600 PYKB01000640.1 Protein Homology CDS 2756 3226 . + 0 ID=cds-TGC94539.1;Parent=gene-C9F09_09600;Dbxref=NCBI_GP:TGC94539.1;Name=TGC94539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456260.1;locus_tag=C9F09_09600;product=heat-shock protein;protein_id=TGC94539.1;transl_table=11 PYKB01000640.1 Genbank gene 3565 4608 . + . ID=gene-C9F09_09605;Name=C9F09_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09605 PYKB01000640.1 Protein Homology CDS 3565 4608 . + 0 ID=cds-TGC94540.1;Parent=gene-C9F09_09605;Dbxref=NCBI_GP:TGC94540.1;Name=TGC94540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=C9F09_09605;product=hypothetical protein;protein_id=TGC94540.1;transl_table=11 PYKB01000640.1 Genbank gene 4690 5220 . - . ID=gene-C9F09_09610;Name=C9F09_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09610 PYKB01000640.1 Protein Homology CDS 4690 5220 . - 0 ID=cds-TGC94541.1;Parent=gene-C9F09_09610;Dbxref=NCBI_GP:TGC94541.1;Name=TGC94541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=C9F09_09610;product=cytochrome b;protein_id=TGC94541.1;transl_table=11 PYKB01000640.1 Genbank gene 5369 5683 . - . ID=gene-C9F09_09615;Name=C9F09_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09615 PYKB01000640.1 Protein Homology CDS 5369 5683 . - 0 ID=cds-TGC94542.1;Parent=gene-C9F09_09615;Dbxref=NCBI_GP:TGC94542.1;Name=TGC94542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456256.1;locus_tag=C9F09_09615;product=hypothetical protein;protein_id=TGC94542.1;transl_table=11 PYKB01000640.1 Genbank gene 6365 7999 . + . ID=gene-C9F09_09620;Name=C9F09_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09620 PYKB01000640.1 Protein Homology CDS 6365 7999 . + 0 ID=cds-TGC94543.1;Parent=gene-C9F09_09620;Dbxref=NCBI_GP:TGC94543.1;Name=TGC94543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=C9F09_09620;product=nickel ABC transporter substrate-binding protein;protein_id=TGC94543.1;transl_table=11 PYKB01000640.1 Genbank pseudogene 7999 8418 . + . ID=gene-C9F09_09625;Name=C9F09_09625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_09625;pseudo=true PYKB01000640.1 Protein Homology CDS 7999 8418 . + 0 ID=cds-C9F09_09625;Parent=gene-C9F09_09625;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=C9F09_09625;product=peptide ABC transporter permease;pseudo=true;transl_table=11 ##sequence-region PYKB01001511.1 1 1870 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001511.1 Genbank region 1 1870 . + . ID=PYKB01001511.1:1..1870;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001511.1 Genbank gene 1 86 . + . ID=gene-C9F09_26230;Name=C9F09_26230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26230;partial=true;start_range=.,1 PYKB01001511.1 Protein Homology CDS 1 86 . + 2 ID=cds-TGC77004.1;Parent=gene-C9F09_26230;Dbxref=NCBI_GP:TGC77004.1;Name=TGC77004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454751.1;locus_tag=C9F09_26230;partial=true;product=LysR family transcriptional regulator;protein_id=TGC77004.1;start_range=.,1;transl_table=11 PYKB01001511.1 Genbank gene 83 274 . - . ID=gene-C9F09_26235;Name=C9F09_26235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26235 PYKB01001511.1 Protein Homology CDS 83 274 . - 0 ID=cds-TGC77005.1;Parent=gene-C9F09_26235;Dbxref=NCBI_GP:TGC77005.1;Name=TGC77005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454752.1;locus_tag=C9F09_26235;product=DNA gyrase inhibitor YacG;protein_id=TGC77005.1;transl_table=11 PYKB01001511.1 Genbank gene 284 1027 . - . ID=gene-C9F09_26240;Name=C9F09_26240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26240 PYKB01001511.1 Protein Homology CDS 284 1027 . - 0 ID=cds-TGC77006.1;Parent=gene-C9F09_26240;Dbxref=NCBI_GP:TGC77006.1;Name=TGC77006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454753.1;locus_tag=C9F09_26240;product=cell division protein ZapD;protein_id=TGC77006.1;transl_table=11 PYKB01001511.1 Genbank gene 1027 1647 . - . ID=gene-C9F09_26245;Name=C9F09_26245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26245 PYKB01001511.1 Protein Homology CDS 1027 1647 . - 0 ID=cds-TGC77007.1;Parent=gene-C9F09_26245;Dbxref=NCBI_GP:TGC77007.1;Name=TGC77007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454754.1;locus_tag=C9F09_26245;product=dephospho-CoA kinase;protein_id=TGC77007.1;transl_table=11 ##sequence-region PYKB01000922.1 1 1869 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000922.1 Genbank region 1 1869 . + . ID=PYKB01000922.1:1..1869;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000922.1 Genbank pseudogene 1 1869 . + . ID=gene-C9F09_15195;Name=C9F09_15195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15195;pseudo=true PYKB01000922.1 Protein Homology CDS 1 1869 . + 1 ID=cds-C9F09_15195;Parent=gene-C9F09_15195;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=C9F09_15195;product=exonuclease subunit SbcC;pseudo=true;transl_table=11 ##sequence-region PYKB01000320.1 1 1863 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000320.1 Genbank region 1 1863 . + . ID=PYKB01000320.1:1..1863;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000320.1 Genbank gene 1 1567 . + . ID=gene-C9F09_03585;Name=C9F09_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03585;partial=true;start_range=.,1 PYKB01000320.1 Protein Homology CDS 1 1567 . + 1 ID=cds-TGD01133.1;Parent=gene-C9F09_03585;Dbxref=NCBI_GP:TGD01133.1;Name=TGD01133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459269.1;locus_tag=C9F09_03585;partial=true;product=type VI secretion system ATPase TssH;protein_id=TGD01133.1;start_range=.,1;transl_table=11 PYKB01000320.1 Genbank gene 1667 1863 . + . ID=gene-C9F09_03590;Name=C9F09_03590;end_range=1863,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03590;partial=true PYKB01000320.1 Protein Homology CDS 1667 1863 . + 0 ID=cds-TGD01134.1;Parent=gene-C9F09_03590;Dbxref=NCBI_GP:TGD01134.1;Name=TGD01134.1;end_range=1863,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_110120.1;locus_tag=C9F09_03590;partial=true;product=type VI secretion system contractile sheath small subunit;protein_id=TGD01134.1;transl_table=11 ##sequence-region PYKB01001100.1 1 1862 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001100.1 Genbank region 1 1862 . + . ID=PYKB01001100.1:1..1862;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001100.1 Genbank gene 1 447 . + . ID=gene-C9F09_18430;Name=C9F09_18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18430;partial=true;start_range=.,1 PYKB01001100.1 Protein Homology CDS 1 447 . + 0 ID=cds-TGC85912.1;Parent=gene-C9F09_18430;Dbxref=NCBI_GP:TGC85912.1;Name=TGC85912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459277.1;locus_tag=C9F09_18430;partial=true;product=type VI secretion system tube protein Hcp;protein_id=TGC85912.1;start_range=.,1;transl_table=11 PYKB01001100.1 Genbank gene 751 1236 . + . ID=gene-C9F09_18435;Name=C9F09_18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18435 PYKB01001100.1 Protein Homology CDS 751 1236 . + 0 ID=cds-TGC85913.1;Parent=gene-C9F09_18435;Dbxref=NCBI_GP:TGC85913.1;Name=TGC85913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459275.1;locus_tag=C9F09_18435;product=hypothetical protein;protein_id=TGC85913.1;transl_table=11 PYKB01001100.1 Genbank gene 1221 1604 . + . ID=gene-C9F09_18440;Name=C9F09_18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18440 PYKB01001100.1 Protein Homology CDS 1221 1604 . + 0 ID=cds-TGC85914.1;Parent=gene-C9F09_18440;Dbxref=NCBI_GP:TGC85914.1;Name=TGC85914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459276.1;locus_tag=C9F09_18440;product=hypothetical protein;protein_id=TGC85914.1;transl_table=11 PYKB01001100.1 Genbank gene 1747 1862 . + . ID=gene-C9F09_18445;Name=C9F09_18445;end_range=1862,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18445;partial=true PYKB01001100.1 Protein Homology CDS 1747 1862 . + 0 ID=cds-TGC85915.1;Parent=gene-C9F09_18445;Dbxref=NCBI_GP:TGC85915.1;Name=TGC85915.1;end_range=1862,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459277.1;locus_tag=C9F09_18445;partial=true;product=type VI secretion system tube protein Hcp;protein_id=TGC85915.1;transl_table=11 ##sequence-region PYKB01001533.1 1 1818 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001533.1 Genbank region 1 1818 . + . ID=PYKB01001533.1:1..1818;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001533.1 Genbank gene 1 992 . - . ID=gene-C9F09_26655;Name=C9F09_26655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26655;partial=true;start_range=.,1 PYKB01001533.1 Protein Homology CDS 1 992 . - 0 ID=cds-TGC76428.1;Parent=gene-C9F09_26655;Dbxref=NCBI_GP:TGC76428.1;Name=TGC76428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002414530.1;locus_tag=C9F09_26655;partial=true;product=RNA-splicing ligase RtcB;protein_id=TGC76428.1;start_range=.,1;transl_table=11 PYKB01001533.1 Genbank gene 1338 1818 . - . ID=gene-C9F09_26660;Name=C9F09_26660;end_range=1818,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26660;partial=true PYKB01001533.1 Protein Homology CDS 1338 1818 . - 1 ID=cds-TGC76429.1;Parent=gene-C9F09_26660;Dbxref=NCBI_GP:TGC76429.1;Name=TGC76429.1;end_range=1818,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=C9F09_26660;partial=true;product=TROVE domain-containing protein;protein_id=TGC76429.1;transl_table=11 ##sequence-region PYKB01000257.1 1 1853 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000257.1 Genbank region 1 1853 . + . ID=PYKB01000257.1:1..1853;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000257.1 Genbank gene 1 471 . - . ID=gene-C9F09_02800;Name=C9F09_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02800;partial=true;start_range=.,1 PYKB01000257.1 Protein Homology CDS 1 471 . - 0 ID=cds-TGD02431.1;Parent=gene-C9F09_02800;Dbxref=NCBI_GP:TGD02431.1;Name=TGD02431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457486.1;locus_tag=C9F09_02800;partial=true;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=TGD02431.1;start_range=.,1;transl_table=11 PYKB01000257.1 Genbank gene 548 1255 . - . ID=gene-C9F09_02805;Name=C9F09_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02805 PYKB01000257.1 Protein Homology CDS 548 1255 . - 0 ID=cds-TGD02430.1;Parent=gene-C9F09_02805;Dbxref=NCBI_GP:TGD02430.1;Name=TGD02430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457485.1;locus_tag=C9F09_02805;product=deoxyribonuclease I;protein_id=TGD02430.1;transl_table=11 PYKB01000257.1 Genbank gene 1351 1818 . - . ID=gene-C9F09_02810;Name=C9F09_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02810 PYKB01000257.1 Protein Homology CDS 1351 1818 . - 0 ID=cds-TGD02432.1;Parent=gene-C9F09_02810;Dbxref=NCBI_GP:TGD02432.1;Name=TGD02432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504927.1;locus_tag=C9F09_02810;product=SprT family zinc-dependent metalloprotease;protein_id=TGD02432.1;transl_table=11 ##sequence-region PYKB01000103.1 1 1848 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000103.1 Genbank region 1 1848 . + . ID=PYKB01000103.1:1..1848;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000103.1 Genbank gene 1 206 . + . ID=gene-C9F09_01180;Name=C9F09_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01180;partial=true;start_range=.,1 PYKB01000103.1 Protein Homology CDS 1 206 . + 2 ID=cds-TGD05422.1;Parent=gene-C9F09_01180;Dbxref=NCBI_GP:TGD05422.1;Name=TGD05422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456326.1;locus_tag=C9F09_01180;partial=true;product=hypothetical protein;protein_id=TGD05422.1;start_range=.,1;transl_table=11 PYKB01000103.1 Genbank gene 185 391 . - . ID=gene-C9F09_01185;Name=C9F09_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01185 PYKB01000103.1 Protein Homology CDS 185 391 . - 0 ID=cds-TGD05423.1;Parent=gene-C9F09_01185;Dbxref=NCBI_GP:TGD05423.1;Name=TGD05423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664103.1;locus_tag=C9F09_01185;product=hypothetical protein;protein_id=TGD05423.1;transl_table=11 PYKB01000103.1 Genbank gene 411 1848 . + . ID=gene-C9F09_01190;Name=C9F09_01190;end_range=1848,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01190;partial=true PYKB01000103.1 Protein Homology CDS 411 1848 . + 0 ID=cds-TGD05424.1;Parent=gene-C9F09_01190;Dbxref=NCBI_GP:TGD05424.1;Name=TGD05424.1;end_range=1848,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456325.1;locus_tag=C9F09_01190;partial=true;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=TGD05424.1;transl_table=11 ##sequence-region PYKB01000031.1 1 1848 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000031.1 Genbank region 1 1848 . + . ID=PYKB01000031.1:1..1848;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000031.1 Genbank gene 10 1290 . - . ID=gene-C9F09_00380;Name=C9F09_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00380 PYKB01000031.1 Protein Homology CDS 10 1290 . - 0 ID=cds-TGD06831.1;Parent=gene-C9F09_00380;Dbxref=NCBI_GP:TGD06831.1;Name=TGD06831.1;Note=involved in the transport of nitrate and nitrite;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001671160.1;locus_tag=C9F09_00380;product=nitrate/nitrite transporter;protein_id=TGD06831.1;transl_table=11 PYKB01000031.1 Genbank gene 1378 1563 . - . ID=gene-C9F09_00385;Name=C9F09_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00385 PYKB01000031.1 Protein Homology CDS 1378 1563 . - 0 ID=cds-TGD06833.1;Parent=gene-C9F09_00385;Dbxref=NCBI_GP:TGD06833.1;Name=TGD06833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218746.1;locus_tag=C9F09_00385;product=hypothetical protein;protein_id=TGD06833.1;transl_table=11 PYKB01000031.1 Genbank gene 1631 1848 . + . ID=gene-C9F09_00390;Name=C9F09_00390;end_range=1848,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00390;partial=true PYKB01000031.1 Protein Homology CDS 1631 1848 . + 0 ID=cds-TGD06832.1;Parent=gene-C9F09_00390;Dbxref=NCBI_GP:TGD06832.1;Name=TGD06832.1;end_range=1848,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455737.1;locus_tag=C9F09_00390;partial=true;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=TGD06832.1;transl_table=11 ##sequence-region PYKB01001155.1 1 1847 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001155.1 Genbank region 1 1847 . + . ID=PYKB01001155.1:1..1847;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001155.1 Genbank gene 1 1107 . - . ID=gene-C9F09_19540;Name=C9F09_19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19540;partial=true;start_range=.,1 PYKB01001155.1 Protein Homology CDS 1 1107 . - 0 ID=cds-TGC84592.1;Parent=gene-C9F09_19540;Dbxref=NCBI_GP:TGC84592.1;Name=TGC84592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537511.1;locus_tag=C9F09_19540;partial=true;product=phage tail tape measure protein;protein_id=TGC84592.1;start_range=.,1;transl_table=11 PYKB01001155.1 Genbank gene 1269 1847 . + . ID=gene-C9F09_19545;Name=C9F09_19545;end_range=1847,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19545;partial=true PYKB01001155.1 Protein Homology CDS 1269 1847 . + 0 ID=cds-TGC84593.1;Parent=gene-C9F09_19545;Dbxref=NCBI_GP:TGC84593.1;Name=TGC84593.1;end_range=1847,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001427299.1;locus_tag=C9F09_19545;partial=true;product=DNA (cytosine-5-)-methyltransferase;protein_id=TGC84593.1;transl_table=11 ##sequence-region PYKB01001072.1 1 1844 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001072.1 Genbank region 1 1844 . + . ID=PYKB01001072.1:1..1844;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001072.1 Genbank pseudogene 71 697 . + . ID=gene-C9F09_17930;Name=C9F09_17930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17930;pseudo=true PYKB01001072.1 Protein Homology CDS 71 697 . + 0 ID=cds-C9F09_17930;Parent=gene-C9F09_17930;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=C9F09_17930;product=DUF1264 domain-containing protein;pseudo=true;transl_table=11 PYKB01001072.1 Genbank gene 826 1844 . + . ID=gene-C9F09_17935;Name=C9F09_17935;end_range=1844,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17935;partial=true PYKB01001072.1 Protein Homology CDS 826 1844 . + 0 ID=cds-TGC86671.1;Parent=gene-C9F09_17935;Dbxref=NCBI_GP:TGC86671.1;Name=TGC86671.1;end_range=1844,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=C9F09_17935;partial=true;product=malto-oligosyltrehalose trehalohydrolase;protein_id=TGC86671.1;transl_table=11 ##sequence-region PYKB01001058.1 1 8465 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001058.1 Genbank region 1 8465 . + . ID=PYKB01001058.1:1..8465;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001058.1 Genbank gene 62 1405 . + . ID=gene-C9F09_17730;Name=C9F09_17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17730 PYKB01001058.1 Protein Homology CDS 62 1405 . + 0 ID=cds-TGC86938.1;Parent=gene-C9F09_17730;Dbxref=NCBI_GP:TGC86938.1;Name=TGC86938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455450.1;locus_tag=C9F09_17730;product=replication-associated recombination protein A;protein_id=TGC86938.1;transl_table=11 PYKB01001058.1 Genbank gene 1402 1620 . - . ID=gene-C9F09_17735;Name=C9F09_17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17735 PYKB01001058.1 Protein Homology CDS 1402 1620 . - 0 ID=cds-TGC86945.1;Parent=gene-C9F09_17735;Dbxref=NCBI_GP:TGC86945.1;Name=TGC86945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752570.1;locus_tag=C9F09_17735;product=hypothetical protein;protein_id=TGC86945.1;transl_table=11 PYKB01001058.1 Genbank gene 1664 2956 . + . ID=gene-C9F09_17740;Name=C9F09_17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17740 PYKB01001058.1 Protein Homology CDS 1664 2956 . + 0 ID=cds-TGC86939.1;Parent=gene-C9F09_17740;Dbxref=NCBI_GP:TGC86939.1;Name=TGC86939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=C9F09_17740;product=serine--tRNA ligase;protein_id=TGC86939.1;transl_table=11 PYKB01001058.1 Genbank gene 3192 5636 . + . ID=gene-C9F09_17745;Name=C9F09_17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17745 PYKB01001058.1 Protein Homology CDS 3192 5636 . + 0 ID=cds-TGC86940.1;Parent=gene-C9F09_17745;Dbxref=NCBI_GP:TGC86940.1;Name=TGC86940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=C9F09_17745;product=dimethylsulfoxide reductase subunit A;protein_id=TGC86940.1;transl_table=11 PYKB01001058.1 Genbank gene 5647 6264 . + . ID=gene-C9F09_17750;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=C9F09_17750 PYKB01001058.1 Protein Homology CDS 5647 6264 . + 0 ID=cds-TGC86941.1;Parent=gene-C9F09_17750;Dbxref=NCBI_GP:TGC86941.1;Name=TGC86941.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460457.1;locus_tag=C9F09_17750;product=dimethylsulfoxide reductase%2C chain B;protein_id=TGC86941.1;transl_table=11 PYKB01001058.1 Genbank gene 6266 7120 . + . ID=gene-C9F09_17755;Name=C9F09_17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17755 PYKB01001058.1 Protein Homology CDS 6266 7120 . + 0 ID=cds-TGC86942.1;Parent=gene-C9F09_17755;Dbxref=NCBI_GP:TGC86942.1;Name=TGC86942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455983.1;locus_tag=C9F09_17755;product=dimethylsulfoxide reductase;protein_id=TGC86942.1;transl_table=11 PYKB01001058.1 Genbank gene 7163 7777 . + . ID=gene-C9F09_17760;Name=C9F09_17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17760 PYKB01001058.1 Protein Homology CDS 7163 7777 . + 0 ID=cds-TGC86943.1;Parent=gene-C9F09_17760;Dbxref=NCBI_GP:TGC86943.1;Name=TGC86943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=C9F09_17760;product=Tat proofreading chaperone DmsD;protein_id=TGC86943.1;transl_table=11 PYKB01001058.1 Genbank gene 8082 8465 . + . ID=gene-C9F09_17765;Name=osmY;end_range=8465,.;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=C9F09_17765;partial=true PYKB01001058.1 Protein Homology CDS 8082 8465 . + 0 ID=cds-TGC86944.1;Parent=gene-C9F09_17765;Dbxref=NCBI_GP:TGC86944.1;Name=TGC86944.1;end_range=8465,.;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=C9F09_17765;partial=true;product=osmoprotectant ABC transporter permease OsmY;protein_id=TGC86944.1;transl_table=11 ##sequence-region PYKB01001540.1 1 1838 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001540.1 Genbank region 1 1838 . + . ID=PYKB01001540.1:1..1838;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001540.1 Genbank gene 1 200 . - . ID=gene-C9F09_26835;Name=C9F09_26835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26835;partial=true;start_range=.,1 PYKB01001540.1 Protein Homology CDS 1 200 . - 0 ID=cds-TGC76257.1;Parent=gene-C9F09_26835;Dbxref=NCBI_GP:TGC76257.1;Name=TGC76257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457801.1;locus_tag=C9F09_26835;partial=true;product=hypothetical protein;protein_id=TGC76257.1;start_range=.,1;transl_table=11 PYKB01001540.1 Genbank gene 200 1102 . - . ID=gene-C9F09_26840;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=C9F09_26840 PYKB01001540.1 Protein Homology CDS 200 1102 . - 0 ID=cds-TGC76258.1;Parent=gene-C9F09_26840;Dbxref=NCBI_GP:TGC76258.1;Name=TGC76258.1;gbkey=CDS;gene=xerC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133307.1;locus_tag=C9F09_26840;product=tyrosine recombinase XerC;protein_id=TGC76258.1;transl_table=11 PYKB01001540.1 Genbank gene 1099 1806 . - . ID=gene-C9F09_26845;Name=C9F09_26845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26845 PYKB01001540.1 Protein Homology CDS 1099 1806 . - 0 ID=cds-TGC76259.1;Parent=gene-C9F09_26845;Dbxref=NCBI_GP:TGC76259.1;Name=TGC76259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=C9F09_26845;product=DUF484 family protein;protein_id=TGC76259.1;transl_table=11 ##sequence-region PYKB01001509.1 1 1833 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001509.1 Genbank region 1 1833 . + . ID=PYKB01001509.1:1..1833;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001509.1 Genbank gene 1 88 . + . ID=gene-C9F09_26210;Name=C9F09_26210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26210;partial=true;start_range=.,1 PYKB01001509.1 Protein Homology CDS 1 88 . + 1 ID=cds-TGC77042.1;Parent=gene-C9F09_26210;Dbxref=NCBI_GP:TGC77042.1;Name=TGC77042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040032.1;locus_tag=C9F09_26210;partial=true;product=restriction endonuclease subunit S;protein_id=TGC77042.1;start_range=.,1;transl_table=11 PYKB01001509.1 Genbank gene 305 625 . + . ID=gene-C9F09_26215;Name=C9F09_26215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26215 PYKB01001509.1 Protein Homology CDS 305 625 . + 0 ID=cds-TGC77043.1;Parent=gene-C9F09_26215;Dbxref=NCBI_GP:TGC77043.1;Name=TGC77043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681523.1;locus_tag=C9F09_26215;product=endoribonuclease SymE;protein_id=TGC77043.1;transl_table=11 PYKB01001509.1 Genbank gene 670 1833 . - . ID=gene-C9F09_26220;Name=C9F09_26220;end_range=1833,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26220;partial=true PYKB01001509.1 Protein Homology CDS 670 1833 . - 0 ID=cds-TGC77044.1;Parent=gene-C9F09_26220;Dbxref=NCBI_GP:TGC77044.1;Name=TGC77044.1;end_range=1833,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102841.1;locus_tag=C9F09_26220;partial=true;product=hypothetical protein;protein_id=TGC77044.1;transl_table=11 ##sequence-region PYKB01001736.1 1 1830 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001736.1 Genbank region 1 1830 . + . ID=PYKB01001736.1:1..1830;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001736.1 Genbank gene 1 839 . + . ID=gene-C9F09_30420;Name=C9F09_30420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30420;partial=true;start_range=.,1 PYKB01001736.1 Protein Homology CDS 1 839 . + 2 ID=cds-TGC70844.1;Parent=gene-C9F09_30420;Dbxref=NCBI_GP:TGC70844.1;Name=TGC70844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392887.1;locus_tag=C9F09_30420;partial=true;product=HNH endonuclease;protein_id=TGC70844.1;start_range=.,1;transl_table=11 PYKB01001736.1 Genbank gene 1386 1830 . + . ID=gene-C9F09_30425;Name=C9F09_30425;end_range=1830,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30425;partial=true PYKB01001736.1 Protein Homology CDS 1386 1830 . + 0 ID=cds-TGC70845.1;Parent=gene-C9F09_30425;Dbxref=NCBI_GP:TGC70845.1;Name=TGC70845.1;end_range=1830,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830285.1;locus_tag=C9F09_30425;partial=true;product=IS30 family transposase;protein_id=TGC70845.1;transl_table=11 ##sequence-region PYKB01001671.1 1 1827 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001671.1 Genbank region 1 1827 . + . ID=PYKB01001671.1:1..1827;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001671.1 Genbank gene 62 514 . - . ID=gene-C9F09_29070;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=C9F09_29070 PYKB01001671.1 Protein Homology CDS 62 514 . - 0 ID=cds-TGC73057.1;Parent=gene-C9F09_29070;Dbxref=NCBI_GP:TGC73057.1;Name=TGC73057.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=C9F09_29070;product=ethanolamine utilization protein EutP;protein_id=TGC73057.1;transl_table=11 PYKB01001671.1 Genbank gene 519 869 . - . ID=gene-C9F09_29075;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=C9F09_29075 PYKB01001671.1 Protein Homology CDS 519 869 . - 0 ID=cds-TGC73058.1;Parent=gene-C9F09_29075;Dbxref=NCBI_GP:TGC73058.1;Name=TGC73058.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456604.1;locus_tag=C9F09_29075;product=propanediol utilization protein PduU;protein_id=TGC73058.1;transl_table=11 PYKB01001671.1 Genbank gene 869 1423 . - . ID=gene-C9F09_29080;Name=C9F09_29080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29080 PYKB01001671.1 Protein Homology CDS 869 1423 . - 0 ID=cds-TGC73059.1;Parent=gene-C9F09_29080;Dbxref=NCBI_GP:TGC73059.1;Name=TGC73059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=C9F09_29080;product=propanediol utilization protein;protein_id=TGC73059.1;transl_table=11 PYKB01001671.1 Genbank gene 1426 1827 . - . ID=gene-C9F09_29085;Name=C9F09_29085;end_range=1827,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29085;partial=true PYKB01001671.1 Protein Homology CDS 1426 1827 . - 0 ID=cds-TGC73060.1;Parent=gene-C9F09_29085;Dbxref=NCBI_GP:TGC73060.1;Name=TGC73060.1;end_range=1827,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=C9F09_29085;partial=true;product=electron transport complex protein RnfC;protein_id=TGC73060.1;transl_table=11 ##sequence-region PYKB01000054.1 1 1825 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000054.1 Genbank region 1 1825 . + . ID=PYKB01000054.1:1..1825;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000054.1 Genbank pseudogene 1 101 . + . ID=gene-C9F09_00590;Name=C9F09_00590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00590;pseudo=true PYKB01000054.1 Protein Homology CDS 1 101 . + 2 ID=cds-C9F09_00590;Parent=gene-C9F09_00590;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456099.1;locus_tag=C9F09_00590;product=superoxide dismutase;pseudo=true;transl_table=11 PYKB01000054.1 Genbank gene 184 273 . - . ID=gene-C9F09_00595;Name=ynhF;gbkey=Gene;gene=ynhF;gene_biotype=protein_coding;locus_tag=C9F09_00595 PYKB01000054.1 Protein Homology CDS 184 273 . - 0 ID=cds-TGD06405.1;Parent=gene-C9F09_00595;Dbxref=NCBI_GP:TGD06405.1;Name=TGD06405.1;gbkey=CDS;gene=ynhF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=C9F09_00595;product=YnhF family membrane protein;protein_id=TGD06405.1;transl_table=11 PYKB01000054.1 Genbank pseudogene 359 569 . + . ID=gene-C9F09_00600;Name=C9F09_00600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00600;pseudo=true PYKB01000054.1 Protein Homology CDS 359 569 . + 0 ID=cds-C9F09_00600;Parent=gene-C9F09_00600;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001332824.1;locus_tag=C9F09_00600;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000054.1 Genbank gene 569 1594 . + . ID=gene-C9F09_00605;Name=C9F09_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00605 PYKB01000054.1 Protein Homology CDS 569 1594 . + 0 ID=cds-TGD06406.1;Parent=gene-C9F09_00605;Dbxref=NCBI_GP:TGD06406.1;Name=TGD06406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=C9F09_00605;product=PurR family transcriptional regulator;protein_id=TGD06406.1;transl_table=11 PYKB01000054.1 Genbank gene 1591 1825 . - . ID=gene-C9F09_00610;Name=C9F09_00610;end_range=1825,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00610;partial=true PYKB01000054.1 Protein Homology CDS 1591 1825 . - 1 ID=cds-TGD06407.1;Parent=gene-C9F09_00610;Dbxref=NCBI_GP:TGD06407.1;Name=TGD06407.1;end_range=1825,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=C9F09_00610;partial=true;product=LysR family transcriptional regulator;protein_id=TGD06407.1;transl_table=11 ##sequence-region PYKB01000551.1 1 1817 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000551.1 Genbank region 1 1817 . + . ID=PYKB01000551.1:1..1817;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000551.1 Genbank gene 1 771 . + . ID=gene-C9F09_07610;Name=C9F09_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07610;partial=true;start_range=.,1 PYKB01000551.1 Protein Homology CDS 1 771 . + 0 ID=cds-TGC96485.1;Parent=gene-C9F09_07610;Dbxref=NCBI_GP:TGC96485.1;Name=TGC96485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=C9F09_07610;partial=true;product=rod shape-determining protein RodA;protein_id=TGC96485.1;start_range=.,1;transl_table=11 PYKB01000551.1 Genbank gene 782 1817 . + . ID=gene-C9F09_07615;Name=C9F09_07615;end_range=1817,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07615;partial=true PYKB01000551.1 Protein Homology CDS 782 1817 . + 0 ID=cds-TGC96486.1;Parent=gene-C9F09_07615;Dbxref=NCBI_GP:TGC96486.1;Name=TGC96486.1;end_range=1817,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=C9F09_07615;partial=true;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=TGC96486.1;transl_table=11 ##sequence-region PYKB01000047.1 1 1810 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000047.1 Genbank region 1 1810 . + . ID=PYKB01000047.1:1..1810;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000047.1 Genbank pseudogene 1 1699 . - . ID=gene-C9F09_00545;Name=C9F09_00545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00545;pseudo=true PYKB01000047.1 Protein Homology CDS 1 1699 . - 0 ID=cds-C9F09_00545;Parent=gene-C9F09_00545;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=C9F09_00545;product=pilin outer membrane usher protein SafC;pseudo=true;transl_table=11 ##sequence-region PYKB01001226.1 1 1809 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001226.1 Genbank region 1 1809 . + . ID=PYKB01001226.1:1..1809;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001226.1 Genbank gene 1 753 . - . ID=gene-C9F09_20750;Name=C9F09_20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20750;partial=true;start_range=.,1 PYKB01001226.1 Protein Homology CDS 1 753 . - 0 ID=cds-TGC82985.1;Parent=gene-C9F09_20750;Dbxref=NCBI_GP:TGC82985.1;Name=TGC82985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456902.1;locus_tag=C9F09_20750;partial=true;product=diaminopimelate decarboxylase;protein_id=TGC82985.1;start_range=.,1;transl_table=11 PYKB01001226.1 Genbank gene 964 1809 . + . ID=gene-C9F09_20755;Name=C9F09_20755;end_range=1809,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20755;partial=true PYKB01001226.1 Protein Homology CDS 964 1809 . + 0 ID=cds-TGC82986.1;Parent=gene-C9F09_20755;Dbxref=NCBI_GP:TGC82986.1;Name=TGC82986.1;end_range=1809,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=C9F09_20755;partial=true;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=TGC82986.1;transl_table=11 ##sequence-region PYKB01000412.1 1 1809 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000412.1 Genbank region 1 1809 . + . ID=PYKB01000412.1:1..1809;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000412.1 Genbank gene 1 518 . - . ID=gene-C9F09_04715;Name=C9F09_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04715;partial=true;start_range=.,1 PYKB01000412.1 Protein Homology CDS 1 518 . - 0 ID=cds-TGC99418.1;Parent=gene-C9F09_04715;Dbxref=NCBI_GP:TGC99418.1;Name=TGC99418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=C9F09_04715;partial=true;product=paraslipin;protein_id=TGC99418.1;start_range=.,1;transl_table=11 PYKB01000412.1 Genbank gene 665 1342 . + . ID=gene-C9F09_04720;Name=C9F09_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04720 PYKB01000412.1 Protein Homology CDS 665 1342 . + 0 ID=cds-TGC99419.1;Parent=gene-C9F09_04720;Dbxref=NCBI_GP:TGC99419.1;Name=TGC99419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=C9F09_04720;product=iron ABC transporter ATP-binding protein FetA;protein_id=TGC99419.1;transl_table=11 PYKB01000412.1 Genbank gene 1329 1809 . + . ID=gene-C9F09_04725;Name=C9F09_04725;end_range=1809,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04725;partial=true PYKB01000412.1 Protein Homology CDS 1329 1809 . + 0 ID=cds-TGC99420.1;Parent=gene-C9F09_04725;Dbxref=NCBI_GP:TGC99420.1;Name=TGC99420.1;end_range=1809,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455098.1;locus_tag=C9F09_04725;partial=true;product=iron export ABC transporter permease subunit FetB;protein_id=TGC99420.1;transl_table=11 ##sequence-region PYKB01000778.1 1 1804 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000778.1 Genbank region 1 1804 . + . ID=PYKB01000778.1:1..1804;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000778.1 Genbank gene 3 623 . - . ID=gene-C9F09_12050;Name=C9F09_12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12050 PYKB01000778.1 Protein Homology CDS 3 623 . - 0 ID=cds-TGC92532.1;Parent=gene-C9F09_12050;Dbxref=NCBI_GP:TGC92532.1;Name=TGC92532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455396.1;locus_tag=C9F09_12050;product=DNA-binding transcriptional regulator;protein_id=TGC92532.1;transl_table=11 PYKB01000778.1 Genbank gene 791 1804 . + . ID=gene-C9F09_12055;Name=C9F09_12055;end_range=1804,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12055;partial=true PYKB01000778.1 Protein Homology CDS 791 1804 . + 0 ID=cds-TGC92533.1;Parent=gene-C9F09_12055;Dbxref=NCBI_GP:TGC92533.1;Name=TGC92533.1;end_range=1804,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=C9F09_12055;partial=true;product=MFS transporter;protein_id=TGC92533.1;transl_table=11 ##sequence-region PYKB01001618.1 1 8429 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001618.1 Genbank region 1 8429 . + . ID=PYKB01001618.1:1..8429;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001618.1 Genbank gene 1 419 . + . ID=gene-C9F09_28320;Name=C9F09_28320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28320;partial=true;start_range=.,1 PYKB01001618.1 Protein Homology CDS 1 419 . + 2 ID=cds-TGC74505.1;Parent=gene-C9F09_28320;Dbxref=NCBI_GP:TGC74505.1;Name=TGC74505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=C9F09_28320;partial=true;product=hypothetical protein;protein_id=TGC74505.1;start_range=.,1;transl_table=11 PYKB01001618.1 Genbank gene 498 1058 . - . ID=gene-C9F09_28325;Name=C9F09_28325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28325 PYKB01001618.1 Protein Homology CDS 498 1058 . - 0 ID=cds-TGC74506.1;Parent=gene-C9F09_28325;Dbxref=NCBI_GP:TGC74506.1;Name=TGC74506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455149.1;locus_tag=C9F09_28325;product=DUF417 domain-containing protein;protein_id=TGC74506.1;transl_table=11 PYKB01001618.1 Genbank gene 1071 1307 . - . ID=gene-C9F09_28330;Name=C9F09_28330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28330 PYKB01001618.1 Protein Homology CDS 1071 1307 . - 0 ID=cds-TGC74507.1;Parent=gene-C9F09_28330;Dbxref=NCBI_GP:TGC74507.1;Name=TGC74507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455148.1;locus_tag=C9F09_28330;product=DUF1471 domain-containing protein;protein_id=TGC74507.1;transl_table=11 PYKB01001618.1 Genbank gene 1464 2789 . - . ID=gene-C9F09_28335;Name=C9F09_28335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28335 PYKB01001618.1 Protein Homology CDS 1464 2789 . - 0 ID=cds-TGC74508.1;Parent=gene-C9F09_28335;Dbxref=NCBI_GP:TGC74508.1;Name=TGC74508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=C9F09_28335;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=TGC74508.1;transl_table=11 PYKB01001618.1 Genbank gene 3005 3859 . + . ID=gene-C9F09_28340;Name=C9F09_28340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28340 PYKB01001618.1 Protein Homology CDS 3005 3859 . + 0 ID=cds-TGC74509.1;Parent=gene-C9F09_28340;Dbxref=NCBI_GP:TGC74509.1;Name=TGC74509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=C9F09_28340;product=AraC family transcriptional regulator;protein_id=TGC74509.1;transl_table=11 PYKB01001618.1 Genbank pseudogene 4008 4196 . + . ID=gene-C9F09_28345;Name=C9F09_28345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28345;pseudo=true PYKB01001618.1 Protein Homology CDS 4008 4196 . + 0 ID=cds-C9F09_28345;Parent=gene-C9F09_28345;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459553.1;locus_tag=C9F09_28345;product=ATP-binding protein;pseudo=true;transl_table=11 PYKB01001618.1 Genbank gene 4396 4641 . + . ID=gene-C9F09_28350;Name=C9F09_28350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28350 PYKB01001618.1 Protein Homology CDS 4396 4641 . + 0 ID=cds-TGC74510.1;Parent=gene-C9F09_28350;Dbxref=NCBI_GP:TGC74510.1;Name=TGC74510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455145.1;locus_tag=C9F09_28350;product=copper-binding protein;protein_id=TGC74510.1;transl_table=11 PYKB01001618.1 Genbank gene 5065 5427 . + . ID=gene-C9F09_28355;Name=C9F09_28355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28355 PYKB01001618.1 Protein Homology CDS 5065 5427 . + 0 ID=cds-TGC74511.1;Parent=gene-C9F09_28355;Dbxref=NCBI_GP:TGC74511.1;Name=TGC74511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455144.1;locus_tag=C9F09_28355;product=GtrA family protein;protein_id=TGC74511.1;transl_table=11 PYKB01001618.1 Genbank gene 5424 6350 . + . ID=gene-C9F09_28360;Name=C9F09_28360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28360 PYKB01001618.1 Protein Homology CDS 5424 6350 . + 0 ID=cds-TGC74512.1;Parent=gene-C9F09_28360;Dbxref=NCBI_GP:TGC74512.1;Name=TGC74512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=C9F09_28360;product=glycosyltransferase;protein_id=TGC74512.1;transl_table=11 PYKB01001618.1 Genbank gene 6331 7983 . + . ID=gene-C9F09_28365;Name=C9F09_28365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28365 PYKB01001618.1 Protein Homology CDS 6331 7983 . + 0 ID=cds-TGC74513.1;Parent=gene-C9F09_28365;Dbxref=NCBI_GP:TGC74513.1;Name=TGC74513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459550.1;locus_tag=C9F09_28365;product=hypothetical protein;protein_id=TGC74513.1;transl_table=11 ##sequence-region PYKB01000451.1 1 1801 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000451.1 Genbank region 1 1801 . + . ID=PYKB01000451.1:1..1801;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000451.1 Genbank gene 1 286 . - . ID=gene-C9F09_05610;Name=C9F09_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05610;partial=true;start_range=.,1 PYKB01000451.1 Protein Homology CDS 1 286 . - 0 ID=cds-TGC98591.1;Parent=gene-C9F09_05610;Dbxref=NCBI_GP:TGC98591.1;Name=TGC98591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=C9F09_05610;partial=true;product=hypothetical protein;protein_id=TGC98591.1;start_range=.,1;transl_table=11 PYKB01000451.1 Genbank gene 301 705 . - . ID=gene-C9F09_05615;Name=C9F09_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05615 PYKB01000451.1 Protein Homology CDS 301 705 . - 0 ID=cds-TGC98592.1;Parent=gene-C9F09_05615;Dbxref=NCBI_GP:TGC98592.1;Name=TGC98592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458806.1;locus_tag=C9F09_05615;product=DUF2170 domain-containing protein;protein_id=TGC98592.1;transl_table=11 PYKB01000451.1 Genbank gene 838 1569 . - . ID=gene-C9F09_05620;Name=C9F09_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05620 PYKB01000451.1 Protein Homology CDS 838 1569 . - 0 ID=cds-TGC98593.1;Parent=gene-C9F09_05620;Dbxref=NCBI_GP:TGC98593.1;Name=TGC98593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=C9F09_05620;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=TGC98593.1;transl_table=11 PYKB01000451.1 Genbank gene 1660 1801 . - . ID=gene-C9F09_05625;Name=C9F09_05625;end_range=1801,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05625;partial=true PYKB01000451.1 Protein Homology CDS 1660 1801 . - 1 ID=cds-TGC98594.1;Parent=gene-C9F09_05625;Dbxref=NCBI_GP:TGC98594.1;Name=TGC98594.1;end_range=1801,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458804.1;locus_tag=C9F09_05625;partial=true;product=exoribonuclease R;protein_id=TGC98594.1;transl_table=11 ##sequence-region PYKB01000049.1 1 1799 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000049.1 Genbank region 1 1799 . + . ID=PYKB01000049.1:1..1799;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000049.1 Genbank gene 1 1017 . - . ID=gene-C9F09_00555;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=C9F09_00555;partial=true;start_range=.,1 PYKB01000049.1 Protein Homology CDS 1 1017 . - 0 ID=cds-TGD06527.1;Parent=gene-C9F09_00555;Dbxref=NCBI_GP:TGD06527.1;Name=TGD06527.1;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455740.1;locus_tag=C9F09_00555;partial=true;product=nitrate reductase subunit beta;protein_id=TGD06527.1;start_range=.,1;transl_table=11 PYKB01000049.1 Genbank pseudogene 1014 1736 . - . ID=gene-C9F09_00560;Name=C9F09_00560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00560;pseudo=true PYKB01000049.1 Protein Homology CDS 1014 1736 . - 0 ID=cds-C9F09_00560;Parent=gene-C9F09_00560;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=C9F09_00560;product=nitrate reductase subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKB01001720.1 1 1796 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001720.1 Genbank region 1 1796 . + . ID=PYKB01001720.1:1..1796;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001720.1 Genbank pseudogene 67 861 . + . ID=gene-C9F09_30165;Name=C9F09_30165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_30165;pseudo=true PYKB01001720.1 Protein Homology CDS 67 861 . + 0 ID=cds-C9F09_30165;Parent=gene-C9F09_30165;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457317.1;locus_tag=C9F09_30165;product=tRNA pseudouridine(13) synthase TruD;pseudo=true;transl_table=11 PYKB01001720.1 Genbank gene 842 1603 . + . ID=gene-C9F09_30170;Name=C9F09_30170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30170 PYKB01001720.1 Protein Homology CDS 842 1603 . + 0 ID=cds-TGC71386.1;Parent=gene-C9F09_30170;Dbxref=NCBI_GP:TGC71386.1;Name=TGC71386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457316.1;locus_tag=C9F09_30170;product=5'/3'-nucleotidase SurE;protein_id=TGC71386.1;transl_table=11 PYKB01001720.1 Genbank gene 1597 1796 . + . ID=gene-C9F09_30175;Name=pcm;end_range=1796,.;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=C9F09_30175;partial=true PYKB01001720.1 Protein Homology CDS 1597 1796 . + 0 ID=cds-TGC71387.1;Parent=gene-C9F09_30175;Dbxref=NCBI_GP:TGC71387.1;Name=TGC71387.1;Note=catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins;end_range=1796,.;gbkey=CDS;gene=pcm;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=C9F09_30175;partial=true;product=protein-L-isoaspartate O-methyltransferase;protein_id=TGC71387.1;transl_table=11 ##sequence-region PYKB01001707.1 1 1796 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001707.1 Genbank region 1 1796 . + . ID=PYKB01001707.1:1..1796;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001707.1 Genbank gene 186 788 . - . ID=gene-C9F09_29830;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;locus_tag=C9F09_29830 PYKB01001707.1 Protein Homology CDS 186 788 . - 0 ID=cds-TGC71820.1;Parent=gene-C9F09_29830;Dbxref=NCBI_GP:TGC71820.1;Name=TGC71820.1;gbkey=CDS;gene=casB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457331.1;locus_tag=C9F09_29830;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=TGC71820.1;transl_table=11 PYKB01001707.1 Genbank pseudogene 805 1722 . - . ID=gene-C9F09_29835;Name=casA;gbkey=Gene;gene=casA;gene_biotype=pseudogene;locus_tag=C9F09_29835;pseudo=true PYKB01001707.1 Protein Homology CDS 805 1722 . - 0 ID=cds-C9F09_29835;Parent=gene-C9F09_29835;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=casA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457332.1;locus_tag=C9F09_29835;product=type I-E CRISPR-associated protein Cse1/CasA;pseudo=true;transl_table=11 ##sequence-region PYKB01000155.1 1 1791 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000155.1 Genbank region 1 1791 . + . ID=PYKB01000155.1:1..1791;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000155.1 Genbank gene 501 683 . + . ID=gene-C9F09_01730;Name=C9F09_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01730 PYKB01000155.1 Protein Homology CDS 501 683 . + 0 ID=cds-TGD04313.1;Parent=gene-C9F09_01730;Dbxref=NCBI_GP:TGD04313.1;Name=TGD04313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=C9F09_01730;product=molybdopterin-binding protein;protein_id=TGD04313.1;transl_table=11 PYKB01000155.1 Genbank gene 933 1715 . + . ID=gene-C9F09_01735;Name=C9F09_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01735 PYKB01000155.1 Protein Homology CDS 933 1715 . + 0 ID=cds-TGD04312.1;Parent=gene-C9F09_01735;Dbxref=NCBI_GP:TGD04312.1;Name=TGD04312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461234.1;locus_tag=C9F09_01735;product=IclR family transcriptional regulator;protein_id=TGD04312.1;transl_table=11 PYKB01000155.1 Genbank gene 1729 1791 . + . ID=gene-C9F09_01740;Name=C9F09_01740;end_range=1791,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01740;partial=true PYKB01000155.1 Protein Homology CDS 1729 1791 . + 0 ID=cds-TGD04314.1;Parent=gene-C9F09_01740;Dbxref=NCBI_GP:TGD04314.1;Name=TGD04314.1;end_range=1791,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004175029.1;locus_tag=C9F09_01740;partial=true;product=mandelate racemase;protein_id=TGD04314.1;transl_table=11 ##sequence-region PYKB01000403.1 1 1789 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000403.1 Genbank region 1 1789 . + . ID=PYKB01000403.1:1..1789;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000403.1 Genbank gene 1 902 . - . ID=gene-C9F09_04530;Name=C9F09_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04530;partial=true;start_range=.,1 PYKB01000403.1 Protein Homology CDS 1 902 . - 0 ID=cds-TGC99585.1;Parent=gene-C9F09_04530;Dbxref=NCBI_GP:TGC99585.1;Name=TGC99585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=C9F09_04530;partial=true;product=DNA polymerase I;protein_id=TGC99585.1;start_range=.,1;transl_table=11 PYKB01000403.1 Genbank pseudogene 1195 1375 . - . ID=gene-C9F09_04535;Name=C9F09_04535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04535;pseudo=true PYKB01000403.1 Protein Homology CDS 1195 1375 . - 0 ID=cds-C9F09_04535;Parent=gene-C9F09_04535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001442988.1;locus_tag=C9F09_04535;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000403.1 Genbank gene 1290 1789 . + . ID=gene-C9F09_04540;Name=C9F09_04540;end_range=1789,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04540;partial=true PYKB01000403.1 Protein Homology CDS 1290 1789 . + 0 ID=cds-TGC99586.1;Parent=gene-C9F09_04540;Dbxref=NCBI_GP:TGC99586.1;Name=TGC99586.1;end_range=1789,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=C9F09_04540;partial=true;product=acyltransferase;protein_id=TGC99586.1;transl_table=11 ##sequence-region PYKB01000317.1 1 1788 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000317.1 Genbank region 1 1788 . + . ID=PYKB01000317.1:1..1788;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000317.1 Genbank pseudogene 56 505 . - . ID=gene-C9F09_03565;Name=narH;gbkey=Gene;gene=narH;gene_biotype=pseudogene;locus_tag=C9F09_03565;pseudo=true PYKB01000317.1 Protein Homology CDS 56 505 . - 0 ID=cds-C9F09_03565;Parent=gene-C9F09_03565;Note=with NarGJI catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455918.1;locus_tag=C9F09_03565;product=nitrate reductase subunit beta;pseudo=true;transl_table=11 PYKB01000317.1 Genbank pseudogene 502 1314 . - . ID=gene-C9F09_03570;Name=C9F09_03570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_03570;pseudo=true PYKB01000317.1 Protein Homology CDS 502 1314 . - 0 ID=cds-C9F09_03570;Parent=gene-C9F09_03570;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564573.1;locus_tag=C9F09_03570;product=nitrate reductase subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKB01000528.1 1 1784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000528.1 Genbank region 1 1784 . + . ID=PYKB01000528.1:1..1784;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000528.1 Genbank gene 1 188 . - . ID=gene-C9F09_07100;Name=C9F09_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07100;partial=true;start_range=.,1 PYKB01000528.1 Protein Homology CDS 1 188 . - 0 ID=cds-TGC97026.1;Parent=gene-C9F09_07100;Dbxref=NCBI_GP:TGC97026.1;Name=TGC97026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455053.1;locus_tag=C9F09_07100;partial=true;product=peptide ABC transporter substrate-binding protein;protein_id=TGC97026.1;start_range=.,1;transl_table=11 PYKB01000528.1 Genbank gene 289 1107 . + . ID=gene-C9F09_07105;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=C9F09_07105 PYKB01000528.1 Protein Homology CDS 289 1107 . + 0 ID=cds-TGC97027.1;Parent=gene-C9F09_07105;Dbxref=NCBI_GP:TGC97027.1;Name=TGC97027.1;gbkey=CDS;gene=cof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=C9F09_07105;product=HMP-PP phosphatase;protein_id=TGC97027.1;transl_table=11 PYKB01000528.1 Genbank gene 1157 1784 . - . ID=gene-C9F09_07110;Name=C9F09_07110;end_range=1784,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07110;partial=true PYKB01000528.1 Protein Homology CDS 1157 1784 . - 1 ID=cds-TGC97028.1;Parent=gene-C9F09_07110;Dbxref=NCBI_GP:TGC97028.1;Name=TGC97028.1;end_range=1784,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455056.1;locus_tag=C9F09_07110;partial=true;product=cysteine synthase;protein_id=TGC97028.1;transl_table=11 ##sequence-region PYKB01000245.1 1 1779 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000245.1 Genbank region 1 1779 . + . ID=PYKB01000245.1:1..1779;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000245.1 Genbank gene 185 583 . - . ID=gene-C9F09_02685;Name=C9F09_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02685 PYKB01000245.1 Protein Homology CDS 185 583 . - 0 ID=cds-TGD02636.1;Parent=gene-C9F09_02685;Dbxref=NCBI_GP:TGD02636.1;Name=TGD02636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455051.1;locus_tag=C9F09_02685;product=thioesterase;protein_id=TGD02636.1;transl_table=11 PYKB01000245.1 Genbank gene 687 1061 . - . ID=gene-C9F09_02690;Name=C9F09_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02690 PYKB01000245.1 Protein Homology CDS 687 1061 . - 0 ID=cds-TGD02637.1;Parent=gene-C9F09_02690;Dbxref=NCBI_GP:TGD02637.1;Name=TGD02637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455050.1;locus_tag=C9F09_02690;product=hypothetical protein;protein_id=TGD02637.1;transl_table=11 PYKB01000245.1 Genbank pseudogene 1211 1779 . - . ID=gene-C9F09_02695;Name=C9F09_02695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_02695;pseudo=true PYKB01000245.1 Protein Homology CDS 1211 1779 . - 2 ID=cds-C9F09_02695;Parent=gene-C9F09_02695;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455049.1;locus_tag=C9F09_02695;product=peptidylprolyl isomerase;pseudo=true;transl_table=11 ##sequence-region PYKB01000673.1 1 1776 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000673.1 Genbank region 1 1776 . + . ID=PYKB01000673.1:1..1776;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000673.1 Genbank gene 1 1776 . + . ID=gene-C9F09_10095;Name=C9F09_10095;end_range=1776,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10095;partial=true;start_range=.,1 PYKB01000673.1 Protein Homology CDS 1 1776 . + 2 ID=cds-TGC94039.1;Parent=gene-C9F09_10095;Dbxref=NCBI_GP:TGC94039.1;Name=TGC94039.1;end_range=1776,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458804.1;locus_tag=C9F09_10095;partial=true;product=ribonuclease R;protein_id=TGC94039.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000950.1 1 8420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000950.1 Genbank region 1 8420 . + . ID=PYKB01000950.1:1..8420;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000950.1 Genbank gene 211 1749 . - . ID=gene-C9F09_15700;Name=C9F09_15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15700 PYKB01000950.1 Protein Homology CDS 211 1749 . - 0 ID=cds-TGC89286.1;Parent=gene-C9F09_15700;Dbxref=NCBI_GP:TGC89286.1;Name=TGC89286.1;Note=catalyzes the oxidation of acetaldehyde%2C benzaldehyde%2C propionaldehyde and other aldehydes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551836.1;locus_tag=C9F09_15700;product=aldehyde dehydrogenase;protein_id=TGC89286.1;transl_table=11 PYKB01000950.1 Genbank gene 1918 2799 . + . ID=gene-C9F09_15705;Name=C9F09_15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15705 PYKB01000950.1 Protein Homology CDS 1918 2799 . + 0 ID=cds-TGC89287.1;Parent=gene-C9F09_15705;Dbxref=NCBI_GP:TGC89287.1;Name=TGC89287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=C9F09_15705;product=ROK family protein;protein_id=TGC89287.1;transl_table=11 PYKB01000950.1 Genbank gene 3074 4924 . - . ID=gene-C9F09_15710;Name=C9F09_15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15710 PYKB01000950.1 Protein Homology CDS 3074 4924 . - 0 ID=cds-TGC89288.1;Parent=gene-C9F09_15710;Dbxref=NCBI_GP:TGC89288.1;Name=TGC89288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=C9F09_15710;product=selenocysteinyl-tRNA-specific translation elongation factor SelB;protein_id=TGC89288.1;transl_table=11 PYKB01000950.1 Genbank gene 4921 6312 . - . ID=gene-C9F09_15715;Name=C9F09_15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15715 PYKB01000950.1 Protein Homology CDS 4921 6312 . - 0 ID=cds-TGC89289.1;Parent=gene-C9F09_15715;Dbxref=NCBI_GP:TGC89289.1;Name=TGC89289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=C9F09_15715;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=TGC89289.1;transl_table=11 PYKB01000950.1 Genbank gene 6411 7019 . - . ID=gene-C9F09_15720;Name=C9F09_15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15720 PYKB01000950.1 Protein Homology CDS 6411 7019 . - 0 ID=cds-TGC89290.1;Parent=gene-C9F09_15720;Dbxref=NCBI_GP:TGC89290.1;Name=TGC89290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458242.1;locus_tag=C9F09_15720;product=glutathione S-transferase;protein_id=TGC89290.1;transl_table=11 PYKB01000950.1 Genbank gene 7495 8420 . + . ID=gene-C9F09_15725;Name=C9F09_15725;end_range=8420,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15725;partial=true PYKB01000950.1 Protein Homology CDS 7495 8420 . + 0 ID=cds-TGC89291.1;Parent=gene-C9F09_15725;Dbxref=NCBI_GP:TGC89291.1;Name=TGC89291.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate;end_range=8420,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458241.1;locus_tag=C9F09_15725;partial=true;product=PTS mannitol transporter subunit IICBA;protein_id=TGC89291.1;transl_table=11 ##sequence-region PYKB01000361.1 1 1774 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000361.1 Genbank region 1 1774 . + . ID=PYKB01000361.1:1..1774;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000361.1 Genbank gene 35 757 . + . ID=gene-C9F09_04070;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=C9F09_04070 PYKB01000361.1 Protein Homology CDS 35 757 . + 0 ID=cds-TGD00273.1;Parent=gene-C9F09_04070;Dbxref=NCBI_GP:TGD00273.1;Name=TGD00273.1;gbkey=CDS;gene=lpxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=C9F09_04070;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=TGD00273.1;transl_table=11 PYKB01000361.1 Genbank pseudogene 737 942 . - . ID=gene-C9F09_04075;Name=C9F09_04075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_04075;pseudo=true PYKB01000361.1 Protein Homology CDS 737 942 . - 0 ID=cds-C9F09_04075;Parent=gene-C9F09_04075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004143004.1;locus_tag=C9F09_04075;product=MarR family transcriptional regulator;pseudo=true;transl_table=11 PYKB01000361.1 Genbank pseudogene 875 1375 . + . ID=gene-C9F09_04080;Name=purE;gbkey=Gene;gene=purE;gene_biotype=pseudogene;locus_tag=C9F09_04080;pseudo=true PYKB01000361.1 Protein Homology CDS 875 1375 . + 0 ID=cds-C9F09_04080;Parent=gene-C9F09_04080;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=purE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308612.1;locus_tag=C9F09_04080;product=5-(carboxyamino)imidazole ribonucleotide mutase;pseudo=true;transl_table=11 PYKB01000361.1 Genbank gene 1381 1774 . + . ID=gene-C9F09_04085;Name=C9F09_04085;end_range=1774,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_04085;partial=true PYKB01000361.1 Protein Homology CDS 1381 1774 . + 0 ID=cds-TGD00274.1;Parent=gene-C9F09_04085;Dbxref=NCBI_GP:TGD00274.1;Name=TGD00274.1;end_range=1774,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455125.1;locus_tag=C9F09_04085;partial=true;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=TGD00274.1;transl_table=11 ##sequence-region PYKB01000034.1 1 1769 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000034.1 Genbank region 1 1769 . + . ID=PYKB01000034.1:1..1769;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000034.1 Genbank gene 1 1366 . + . ID=gene-C9F09_00415;Name=C9F09_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00415;partial=true;start_range=.,1 PYKB01000034.1 Protein Homology CDS 1 1366 . + 1 ID=cds-TGD06774.1;Parent=gene-C9F09_00415;Dbxref=NCBI_GP:TGD06774.1;Name=TGD06774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458441.1;locus_tag=C9F09_00415;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGD06774.1;start_range=.,1;transl_table=11 PYKB01000034.1 Genbank gene 1405 1626 . + . ID=gene-C9F09_00420;Name=C9F09_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00420 PYKB01000034.1 Protein Homology CDS 1405 1626 . + 0 ID=cds-TGD06775.1;Parent=gene-C9F09_00420;Dbxref=NCBI_GP:TGD06775.1;Name=TGD06775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=C9F09_00420;product=LysR family transcriptional regulator;protein_id=TGD06775.1;transl_table=11 PYKB01000034.1 Genbank pseudogene 1628 1769 . - . ID=gene-C9F09_00425;Name=C9F09_00425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_00425;pseudo=true PYKB01000034.1 Protein Homology CDS 1628 1769 . - 1 ID=cds-C9F09_00425;Parent=gene-C9F09_00425;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458439.1;locus_tag=C9F09_00425;product=monooxygenase;pseudo=true;transl_table=11 ##sequence-region PYKB01001666.1 1 1765 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001666.1 Genbank region 1 1765 . + . ID=PYKB01001666.1:1..1765;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001666.1 Genbank gene 171 1169 . + . ID=gene-C9F09_29000;Name=C9F09_29000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29000 PYKB01001666.1 Protein Homology CDS 171 1169 . + 0 ID=cds-TGC73181.1;Parent=gene-C9F09_29000;Dbxref=NCBI_GP:TGC73181.1;Name=TGC73181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=C9F09_29000;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=TGC73181.1;transl_table=11 PYKB01001666.1 Genbank gene 1303 1765 . + . ID=gene-C9F09_29005;Name=C9F09_29005;end_range=1765,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29005;partial=true PYKB01001666.1 Protein Homology CDS 1303 1765 . + 0 ID=cds-TGC73182.1;Parent=gene-C9F09_29005;Dbxref=NCBI_GP:TGC73182.1;Name=TGC73182.1;end_range=1765,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461134.1;locus_tag=C9F09_29005;partial=true;product=sugar ABC transporter ATP-binding protein;protein_id=TGC73182.1;transl_table=11 ##sequence-region PYKB01000310.1 1 1765 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000310.1 Genbank region 1 1765 . + . ID=PYKB01000310.1:1..1765;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000310.1 Genbank gene 1 540 . - . ID=gene-C9F09_03470;Name=C9F09_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03470;partial=true;start_range=.,1 PYKB01000310.1 Protein Homology CDS 1 540 . - 0 ID=cds-TGD01333.1;Parent=gene-C9F09_03470;Dbxref=NCBI_GP:TGD01333.1;Name=TGD01333.1;Note=catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457910.1;locus_tag=C9F09_03470;partial=true;product=phosphomethylpyrimidine synthase ThiC;protein_id=TGD01333.1;start_range=.,1;transl_table=11 PYKB01000310.1 cmsearch riboswitch 626 789 . - . ID=id-PYKB01000310.1:626..789;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00059,COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PYKB01000310.1 Genbank gene 890 1393 . - . ID=gene-C9F09_03475;Name=C9F09_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03475 PYKB01000310.1 Protein Homology CDS 890 1393 . - 0 ID=cds-TGD01334.1;Parent=gene-C9F09_03475;Dbxref=NCBI_GP:TGD01334.1;Name=TGD01334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=C9F09_03475;product=sigma D regulator;protein_id=TGD01334.1;transl_table=11 PYKB01000310.1 Genbank gene 1486 1765 . + . ID=gene-C9F09_03480;Name=nudC;end_range=1765,.;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=C9F09_03480;partial=true PYKB01000310.1 Protein Homology CDS 1486 1765 . + 0 ID=cds-TGD01335.1;Parent=gene-C9F09_03480;Dbxref=NCBI_GP:TGD01335.1;Name=TGD01335.1;Note=can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates;end_range=1765,.;gbkey=CDS;gene=nudC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457908.1;locus_tag=C9F09_03480;partial=true;product=NAD(+) diphosphatase;protein_id=TGD01335.1;transl_table=11 ##sequence-region PYKB01001626.1 1 1765 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001626.1 Genbank region 1 1765 . + . ID=PYKB01001626.1:1..1765;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001626.1 Genbank gene 208 651 . + . ID=gene-C9F09_28455;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=C9F09_28455 PYKB01001626.1 Protein Homology CDS 208 651 . + 0 ID=cds-TGC74110.1;Parent=gene-C9F09_28455;Dbxref=NCBI_GP:TGC74110.1;Name=TGC74110.1;gbkey=CDS;gene=msrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456221.1;locus_tag=C9F09_28455;product=peptide-methionine (R)-S-oxide reductase;protein_id=TGC74110.1;transl_table=11 PYKB01001626.1 Genbank gene 693 971 . + . ID=gene-C9F09_28460;Name=C9F09_28460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28460 PYKB01001626.1 Protein Homology CDS 693 971 . + 0 ID=cds-TGC74111.1;Parent=gene-C9F09_28460;Dbxref=NCBI_GP:TGC74111.1;Name=TGC74111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456220.1;locus_tag=C9F09_28460;product=DUF1315 domain-containing protein;protein_id=TGC74111.1;transl_table=11 ##sequence-region PYKB01000910.1 1 1761 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000910.1 Genbank region 1 1761 . + . ID=PYKB01000910.1:1..1761;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000910.1 Genbank gene 1 1103 . - . ID=gene-C9F09_14950;Name=C9F09_14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14950;partial=true;start_range=.,1 PYKB01000910.1 Protein Homology CDS 1 1103 . - 0 ID=cds-TGC89981.1;Parent=gene-C9F09_14950;Dbxref=NCBI_GP:TGC89981.1;Name=TGC89981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=C9F09_14950;partial=true;product=type VI secretion system protein TssL;protein_id=TGC89981.1;start_range=.,1;transl_table=11 PYKB01000910.1 Genbank gene 1100 1761 . - . ID=gene-C9F09_14955;Name=tssK;end_range=1761,.;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=C9F09_14955;partial=true PYKB01000910.1 Protein Homology CDS 1100 1761 . - 2 ID=cds-TGC89982.1;Parent=gene-C9F09_14955;Dbxref=NCBI_GP:TGC89982.1;Name=TGC89982.1;end_range=1761,.;gbkey=CDS;gene=tssK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454884.1;locus_tag=C9F09_14955;partial=true;product=type VI secretion system baseplate subunit TssK;protein_id=TGC89982.1;transl_table=11 ##sequence-region PYKB01000554.1 1 1757 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000554.1 Genbank region 1 1757 . + . ID=PYKB01000554.1:1..1757;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000554.1 Genbank pseudogene 87 1757 . + . ID=gene-C9F09_07655;Name=C9F09_07655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07655;pseudo=true PYKB01000554.1 Protein Homology CDS 87 1757 . + 0 ID=cds-C9F09_07655;Parent=gene-C9F09_07655;Note=member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=C9F09_07655;product=phosphoenolpyruvate-protein phosphotransferase PtsP;pseudo=true;transl_table=11 ##sequence-region PYKB01000882.1 1 1752 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000882.1 Genbank region 1 1752 . + . ID=PYKB01000882.1:1..1752;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000882.1 Genbank gene 1 1584 . + . ID=gene-C9F09_14375;Name=C9F09_14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14375;partial=true;start_range=.,1 PYKB01000882.1 Protein Homology CDS 1 1584 . + 0 ID=cds-TGC90565.1;Parent=gene-C9F09_14375;Dbxref=NCBI_GP:TGC90565.1;Name=TGC90565.1;Note=penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=C9F09_14375;partial=true;product=peptidoglycan glycosyltransferase FtsI;protein_id=TGC90565.1;start_range=.,1;transl_table=11 PYKB01000882.1 Genbank gene 1571 1752 . + . ID=gene-C9F09_14380;Name=murE;end_range=1752,.;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=C9F09_14380;partial=true PYKB01000882.1 Protein Homology CDS 1571 1752 . + 0 ID=cds-TGC90566.1;Parent=gene-C9F09_14380;Dbxref=NCBI_GP:TGC90566.1;Name=TGC90566.1;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate;end_range=1752,.;gbkey=CDS;gene=murE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454735.1;locus_tag=C9F09_14380;partial=true;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=TGC90566.1;transl_table=11 ##sequence-region PYKB01000618.1 1 1751 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000618.1 Genbank region 1 1751 . + . ID=PYKB01000618.1:1..1751;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000618.1 Genbank gene 1 832 . - . ID=gene-C9F09_09155;Name=C9F09_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09155;partial=true;start_range=.,1 PYKB01000618.1 Protein Homology CDS 1 832 . - 0 ID=cds-TGC94975.1;Parent=gene-C9F09_09155;Dbxref=NCBI_GP:TGC94975.1;Name=TGC94975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192071.1;locus_tag=C9F09_09155;partial=true;product=CRISPR-associated endonuclease Cas3'';protein_id=TGC94975.1;start_range=.,1;transl_table=11 PYKB01000618.1 Genbank gene 1190 1751 . + . ID=gene-C9F09_09160;Name=casA;end_range=1751,.;gbkey=Gene;gene=casA;gene_biotype=protein_coding;locus_tag=C9F09_09160;partial=true PYKB01000618.1 Protein Homology CDS 1190 1751 . + 0 ID=cds-TGC94976.1;Parent=gene-C9F09_09160;Dbxref=NCBI_GP:TGC94976.1;Name=TGC94976.1;end_range=1751,.;gbkey=CDS;gene=casA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457332.1;locus_tag=C9F09_09160;partial=true;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=TGC94976.1;transl_table=11 ##sequence-region PYKB01000622.1 1 1748 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000622.1 Genbank region 1 1748 . + . ID=PYKB01000622.1:1..1748;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000622.1 Genbank gene 1 1009 . + . ID=gene-C9F09_09245;Name=C9F09_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09245;partial=true;start_range=.,1 PYKB01000622.1 Protein Homology CDS 1 1009 . + 1 ID=cds-TGC94882.1;Parent=gene-C9F09_09245;Dbxref=NCBI_GP:TGC94882.1;Name=TGC94882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=C9F09_09245;partial=true;product=TIGR01620 family protein;protein_id=TGC94882.1;start_range=.,1;transl_table=11 PYKB01000622.1 Genbank gene 1157 1748 . + . ID=gene-C9F09_09250;Name=C9F09_09250;end_range=1748,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09250;partial=true PYKB01000622.1 Protein Homology CDS 1157 1748 . + 0 ID=cds-TGC94883.1;Parent=gene-C9F09_09250;Dbxref=NCBI_GP:TGC94883.1;Name=TGC94883.1;end_range=1748,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455820.1;locus_tag=C9F09_09250;partial=true;product=transcriptional regulator;protein_id=TGC94883.1;transl_table=11 ##sequence-region PYKB01000055.1 1 8365 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000055.1 Genbank region 1 8365 . + . ID=PYKB01000055.1:1..8365;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000055.1 Genbank gene 1 621 . + . ID=gene-C9F09_00615;Name=C9F09_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00615;partial=true;start_range=.,1 PYKB01000055.1 Protein Homology CDS 1 621 . + 0 ID=cds-TGD06397.1;Parent=gene-C9F09_00615;Dbxref=NCBI_GP:TGD06397.1;Name=TGD06397.1;Note=catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455337.1;locus_tag=C9F09_00615;partial=true;product=8-amino-7-oxononanoate synthase;protein_id=TGD06397.1;start_range=.,1;transl_table=11 PYKB01000055.1 Genbank gene 605 1360 . + . ID=gene-C9F09_00620;Name=C9F09_00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00620 PYKB01000055.1 Protein Homology CDS 605 1360 . + 0 ID=cds-TGD06398.1;Parent=gene-C9F09_00620;Dbxref=NCBI_GP:TGD06398.1;Name=TGD06398.1;Note=methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon (bioABFCD)%3B in Escherichia coli%2C bioC-null mutants require biotin for growth;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455338.1;locus_tag=C9F09_00620;product=malonyl-[acyl-carrier protein] O-methyltransferase BioC;protein_id=TGD06398.1;transl_table=11 PYKB01000055.1 Genbank gene 1353 2039 . + . ID=gene-C9F09_00625;Name=C9F09_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00625 PYKB01000055.1 Protein Homology CDS 1353 2039 . + 0 ID=cds-TGD06399.1;Parent=gene-C9F09_00625;Dbxref=NCBI_GP:TGD06399.1;Name=TGD06399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455339.1;locus_tag=C9F09_00625;product=dethiobiotin synthase;protein_id=TGD06399.1;transl_table=11 PYKB01000055.1 Genbank gene 2466 2693 . + . ID=gene-C9F09_00630;Name=C9F09_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00630 PYKB01000055.1 Protein Homology CDS 2466 2693 . + 0 ID=cds-TGD06400.1;Parent=gene-C9F09_00630;Dbxref=NCBI_GP:TGD06400.1;Name=TGD06400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752195.1;locus_tag=C9F09_00630;product=hypothetical protein;protein_id=TGD06400.1;transl_table=11 PYKB01000055.1 Genbank gene 2690 4711 . + . ID=gene-C9F09_00635;Name=C9F09_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00635 PYKB01000055.1 Protein Homology CDS 2690 4711 . + 0 ID=cds-TGD06401.1;Parent=gene-C9F09_00635;Dbxref=NCBI_GP:TGD06401.1;Name=TGD06401.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=C9F09_00635;product=excinuclease ABC subunit B;protein_id=TGD06401.1;transl_table=11 PYKB01000055.1 Genbank gene 5201 7468 . + . ID=gene-C9F09_00640;Name=C9F09_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00640 PYKB01000055.1 Protein Homology CDS 5201 7468 . + 0 ID=cds-TGD06402.1;Parent=gene-C9F09_00640;Dbxref=NCBI_GP:TGD06402.1;Name=TGD06402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=C9F09_00640;product=type III secretion system effector E3 ubiquitin transferase SlrP;protein_id=TGD06402.1;transl_table=11 PYKB01000055.1 Genbank gene 7560 8365 . - . ID=gene-C9F09_00645;Name=C9F09_00645;end_range=8365,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00645;partial=true PYKB01000055.1 Protein Homology CDS 7560 8365 . - 2 ID=cds-TGD06403.1;Parent=gene-C9F09_00645;Dbxref=NCBI_GP:TGD06403.1;Name=TGD06403.1;end_range=8365,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455342.1;locus_tag=C9F09_00645;partial=true;product=hypothetical protein;protein_id=TGD06403.1;transl_table=11 ##sequence-region PYKB01000713.1 1 1746 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000713.1 Genbank region 1 1746 . + . ID=PYKB01000713.1:1..1746;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000713.1 Genbank pseudogene 43 360 . + . ID=gene-C9F09_10880;Name=C9F09_10880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10880;pseudo=true PYKB01000713.1 Protein Homology CDS 43 360 . + 0 ID=cds-C9F09_10880;Parent=gene-C9F09_10880;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462085.1;locus_tag=C9F09_10880;product=TRAP transporter small permease;pseudo=true;transl_table=11 PYKB01000713.1 Genbank gene 371 1678 . + . ID=gene-C9F09_10885;Name=C9F09_10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10885 PYKB01000713.1 Protein Homology CDS 371 1678 . + 0 ID=cds-TGC93529.1;Parent=gene-C9F09_10885;Dbxref=NCBI_GP:TGC93529.1;Name=TGC93529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462086.1;locus_tag=C9F09_10885;product=hypothetical protein;protein_id=TGC93529.1;transl_table=11 ##sequence-region PYKB01001282.1 1 1743 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001282.1 Genbank region 1 1743 . + . ID=PYKB01001282.1:1..1743;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001282.1 Genbank gene 1 884 . - . ID=gene-C9F09_21935;Name=C9F09_21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21935;partial=true;start_range=.,1 PYKB01001282.1 Protein Homology CDS 1 884 . - 0 ID=cds-TGC81964.1;Parent=gene-C9F09_21935;Dbxref=NCBI_GP:TGC81964.1;Name=TGC81964.1;Note=with YejBEF is involved in resistance to microcin C;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456773.1;locus_tag=C9F09_21935;partial=true;product=ABC transporter substrate-binding protein;protein_id=TGC81964.1;start_range=.,1;transl_table=11 PYKB01001282.1 Genbank pseudogene 991 1671 . - . ID=gene-C9F09_21940;Name=C9F09_21940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21940;pseudo=true PYKB01001282.1 Protein Homology CDS 991 1671 . - 0 ID=cds-C9F09_21940;Parent=gene-C9F09_21940;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=C9F09_21940;product=cyclic di-GMP phosphodiesterase;pseudo=true;transl_table=11 ##sequence-region PYKB01000784.1 1 1736 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000784.1 Genbank region 1 1736 . + . ID=PYKB01000784.1:1..1736;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000784.1 Genbank pseudogene 1 411 . + . ID=gene-C9F09_12135;Name=C9F09_12135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12135;pseudo=true PYKB01000784.1 Protein Homology CDS 1 411 . + 0 ID=cds-C9F09_12135;Parent=gene-C9F09_12135;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457489.1;locus_tag=C9F09_12135;product=Holliday junction resolvase RuvX;pseudo=true;transl_table=11 PYKB01000784.1 Genbank gene 458 1144 . - . ID=gene-C9F09_12140;Name=C9F09_12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12140 PYKB01000784.1 Protein Homology CDS 458 1144 . - 0 ID=cds-TGC92419.1;Parent=gene-C9F09_12140;Dbxref=NCBI_GP:TGC92419.1;Name=TGC92419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=C9F09_12140;product=transcriptional regulator;protein_id=TGC92419.1;transl_table=11 PYKB01000784.1 Genbank gene 1276 1736 . - . ID=gene-C9F09_12145;Name=C9F09_12145;end_range=1736,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12145;partial=true PYKB01000784.1 Protein Homology CDS 1276 1736 . - 2 ID=cds-TGC92420.1;Parent=gene-C9F09_12145;Dbxref=NCBI_GP:TGC92420.1;Name=TGC92420.1;end_range=1736,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457491.1;locus_tag=C9F09_12145;partial=true;product=type IV pili twitching motility protein PilT;protein_id=TGC92420.1;transl_table=11 ##sequence-region PYKB01001147.1 1 1730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001147.1 Genbank region 1 1730 . + . ID=PYKB01001147.1:1..1730;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001147.1 Genbank pseudogene 48 728 . + . ID=gene-C9F09_19385;Name=C9F09_19385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_19385;pseudo=true PYKB01001147.1 Protein Homology CDS 48 728 . + 0 ID=cds-C9F09_19385;Parent=gene-C9F09_19385;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454767.1;locus_tag=C9F09_19385;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001147.1 Genbank gene 930 1730 . + . ID=gene-C9F09_19390;Name=C9F09_19390;end_range=1730,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19390;partial=true PYKB01001147.1 Protein Homology CDS 930 1730 . + 0 ID=cds-TGC84786.1;Parent=gene-C9F09_19390;Dbxref=NCBI_GP:TGC84786.1;Name=TGC84786.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;end_range=1730,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=C9F09_19390;partial=true;product=dihydrolipoyl dehydrogenase;protein_id=TGC84786.1;transl_table=11 ##sequence-region PYKB01000865.1 1 1727 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000865.1 Genbank region 1 1727 . + . ID=PYKB01000865.1:1..1727;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000865.1 Genbank gene 1 202 . - . ID=gene-C9F09_14000;Name=C9F09_14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14000;partial=true;start_range=.,1 PYKB01000865.1 Protein Homology CDS 1 202 . - 0 ID=cds-TGC90875.1;Parent=gene-C9F09_14000;Dbxref=NCBI_GP:TGC90875.1;Name=TGC90875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=C9F09_14000;partial=true;product=serine endoprotease DegQ;protein_id=TGC90875.1;start_range=.,1;transl_table=11 PYKB01000865.1 Genbank gene 359 757 . - . ID=gene-C9F09_14005;Name=C9F09_14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14005 PYKB01000865.1 Protein Homology CDS 359 757 . - 0 ID=cds-TGC90876.1;Parent=gene-C9F09_14005;Dbxref=NCBI_GP:TGC90876.1;Name=TGC90876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=C9F09_14005;product=hypothetical protein;protein_id=TGC90876.1;transl_table=11 PYKB01000865.1 Genbank gene 950 1727 . + . ID=gene-C9F09_14010;Name=C9F09_14010;end_range=1727,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14010;partial=true PYKB01000865.1 Protein Homology CDS 950 1727 . + 0 ID=cds-TGC90874.1;Parent=gene-C9F09_14010;Dbxref=NCBI_GP:TGC90874.1;Name=TGC90874.1;end_range=1727,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=C9F09_14010;partial=true;product=cell division protein ZapE;protein_id=TGC90874.1;transl_table=11 ##sequence-region PYKB01001035.1 1 1727 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001035.1 Genbank region 1 1727 . + . ID=PYKB01001035.1:1..1727;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001035.1 Genbank gene 1 1298 . + . ID=gene-C9F09_17270;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=C9F09_17270;partial=true;start_range=.,1 PYKB01001035.1 Protein Homology CDS 1 1298 . + 2 ID=cds-TGC87476.1;Parent=gene-C9F09_17270;Dbxref=NCBI_GP:TGC87476.1;Name=TGC87476.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;gbkey=CDS;gene=hflB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=C9F09_17270;partial=true;product=ATP-dependent metalloprotease;protein_id=TGC87476.1;start_range=.,1;transl_table=11 PYKB01001035.1 Genbank gene 1403 1727 . + . ID=gene-C9F09_17275;Name=folP;end_range=1727,.;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=C9F09_17275;partial=true PYKB01001035.1 Protein Homology CDS 1403 1727 . + 0 ID=cds-TGC87477.1;Parent=gene-C9F09_17275;Dbxref=NCBI_GP:TGC87477.1;Name=TGC87477.1;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;end_range=1727,.;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=C9F09_17275;partial=true;product=dihydropteroate synthase;protein_id=TGC87477.1;transl_table=11 ##sequence-region PYKB01000655.1 1 1723 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000655.1 Genbank region 1 1723 . + . ID=PYKB01000655.1:1..1723;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000655.1 Genbank gene 1 168 . - . ID=gene-C9F09_09855;Name=C9F09_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09855;partial=true;start_range=.,1 PYKB01000655.1 GeneMarkS+ CDS 1 168 . - 0 ID=cds-TGC94312.1;Parent=gene-C9F09_09855;Dbxref=NCBI_GP:TGC94312.1;Name=TGC94312.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F09_09855;partial=true;product=dicarboxylate/amino acid:cation symporter;protein_id=TGC94312.1;start_range=.,1;transl_table=11 PYKB01000655.1 Genbank gene 178 1723 . + . ID=gene-C9F09_09860;Name=C9F09_09860;end_range=1723,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09860;partial=true PYKB01000655.1 Protein Homology CDS 178 1723 . + 0 ID=cds-TGC94313.1;Parent=gene-C9F09_09860;Dbxref=NCBI_GP:TGC94313.1;Name=TGC94313.1;end_range=1723,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442111.1;locus_tag=C9F09_09860;partial=true;product=histidine kinase;protein_id=TGC94313.1;transl_table=11 ##sequence-region PYKB01000726.1 1 1722 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000726.1 Genbank region 1 1722 . + . ID=PYKB01000726.1:1..1722;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000726.1 Genbank gene 1 339 . - . ID=gene-C9F09_11100;Name=C9F09_11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11100;partial=true;start_range=.,1 PYKB01000726.1 Protein Homology CDS 1 339 . - 0 ID=cds-TGC93359.1;Parent=gene-C9F09_11100;Dbxref=NCBI_GP:TGC93359.1;Name=TGC93359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457608.3;locus_tag=C9F09_11100;partial=true;product=putrescine--2-oxoglutarate aminotransferase;protein_id=TGC93359.1;start_range=.,1;transl_table=11 PYKB01000726.1 Genbank gene 389 571 . - . ID=gene-C9F09_11105;Name=C9F09_11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11105 PYKB01000726.1 Protein Homology CDS 389 571 . - 0 ID=cds-TGC93360.1;Parent=gene-C9F09_11105;Dbxref=NCBI_GP:TGC93360.1;Name=TGC93360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001753072.1;locus_tag=C9F09_11105;product=hypothetical protein;protein_id=TGC93360.1;transl_table=11 PYKB01000726.1 Genbank gene 859 1722 . + . ID=gene-C9F09_11110;Name=C9F09_11110;end_range=1722,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11110;partial=true PYKB01000726.1 Protein Homology CDS 859 1722 . + 0 ID=cds-TGC93361.1;Parent=gene-C9F09_11110;Dbxref=NCBI_GP:TGC93361.1;Name=TGC93361.1;end_range=1722,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457607.1;locus_tag=C9F09_11110;partial=true;product=hypothetical protein;protein_id=TGC93361.1;transl_table=11 ##sequence-region PYKB01001751.1 1 1718 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001751.1 Genbank region 1 1718 . + . ID=PYKB01001751.1:1..1718;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001751.1 Genbank gene 1 469 . - . ID=gene-C9F09_30680;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=C9F09_30680;partial=true;start_range=.,1 PYKB01001751.1 Protein Homology CDS 1 469 . - 0 ID=cds-TGC70405.1;Parent=gene-C9F09_30680;Dbxref=NCBI_GP:TGC70405.1;Name=TGC70405.1;gbkey=CDS;gene=glpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456828.1;locus_tag=C9F09_30680;partial=true;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=TGC70405.1;start_range=.,1;transl_table=11 PYKB01001751.1 Genbank gene 459 1718 . - . ID=gene-C9F09_30685;Name=C9F09_30685;end_range=1718,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30685;partial=true PYKB01001751.1 Protein Homology CDS 459 1718 . - 0 ID=cds-TGC70406.1;Parent=gene-C9F09_30685;Dbxref=NCBI_GP:TGC70406.1;Name=TGC70406.1;end_range=1718,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456827.1;locus_tag=C9F09_30685;partial=true;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=TGC70406.1;transl_table=11 ##sequence-region PYKB01001614.1 1 1717 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001614.1 Genbank region 1 1717 . + . ID=PYKB01001614.1:1..1717;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001614.1 Genbank gene 375 1007 . + . ID=gene-C9F09_28270;Name=C9F09_28270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28270 PYKB01001614.1 Protein Homology CDS 375 1007 . + 0 ID=cds-TGC74641.1;Parent=gene-C9F09_28270;Dbxref=NCBI_GP:TGC74641.1;Name=TGC74641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=C9F09_28270;product=transporter;protein_id=TGC74641.1;transl_table=11 PYKB01001614.1 Genbank gene 1048 1717 . - . ID=gene-C9F09_28275;Name=foxA;end_range=1717,.;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=C9F09_28275;partial=true PYKB01001614.1 Protein Homology CDS 1048 1717 . - 1 ID=cds-TGC74642.1;Parent=gene-C9F09_28275;Dbxref=NCBI_GP:TGC74642.1;Name=TGC74642.1;end_range=1717,.;gbkey=CDS;gene=foxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=C9F09_28275;partial=true;product=ferrioxamine B receptor FoxA;protein_id=TGC74642.1;transl_table=11 ##sequence-region PYKB01001527.1 1 8364 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001527.1 Genbank region 1 8364 . + . ID=PYKB01001527.1:1..8364;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001527.1 Genbank gene 1 483 . + . ID=gene-C9F09_26545;Name=C9F09_26545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26545;partial=true;start_range=.,1 PYKB01001527.1 Protein Homology CDS 1 483 . + 0 ID=cds-TGC76553.1;Parent=gene-C9F09_26545;Dbxref=NCBI_GP:TGC76553.1;Name=TGC76553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=C9F09_26545;partial=true;product=IS3 family transposase;protein_id=TGC76553.1;start_range=.,1;transl_table=11 PYKB01001527.1 Genbank gene 480 755 . - . ID=gene-C9F09_26550;Name=C9F09_26550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26550 PYKB01001527.1 Protein Homology CDS 480 755 . - 0 ID=cds-TGC76554.1;Parent=gene-C9F09_26550;Dbxref=NCBI_GP:TGC76554.1;Name=TGC76554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632806.1;locus_tag=C9F09_26550;product=DUF4102 domain-containing protein;protein_id=TGC76554.1;transl_table=11 PYKB01001527.1 Genbank gene 919 994 . - . ID=gene-C9F09_26555;Name=C9F09_26555;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_26555 PYKB01001527.1 tRNAscan-SE tRNA 919 994 . - . ID=rna-C9F09_26555;Parent=gene-C9F09_26555;anticodon=(pos:complement(959..961));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_26555;product=tRNA-Thr PYKB01001527.1 tRNAscan-SE exon 919 994 . - . ID=exon-C9F09_26555-1;Parent=rna-C9F09_26555;anticodon=(pos:complement(959..961));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_26555;product=tRNA-Thr PYKB01001527.1 Genbank gene 1110 2360 . - . ID=gene-C9F09_26560;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=C9F09_26560 PYKB01001527.1 Protein Homology CDS 1110 2360 . - 0 ID=cds-TGC76555.1;Parent=gene-C9F09_26560;Dbxref=NCBI_GP:TGC76555.1;Name=TGC76555.1;gbkey=CDS;gene=proA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454934.1;locus_tag=C9F09_26560;product=glutamate-5-semialdehyde dehydrogenase;protein_id=TGC76555.1;transl_table=11 PYKB01001527.1 Genbank gene 2372 3475 . - . ID=gene-C9F09_26565;Name=C9F09_26565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26565 PYKB01001527.1 Protein Homology CDS 2372 3475 . - 0 ID=cds-TGC76556.1;Parent=gene-C9F09_26565;Dbxref=NCBI_GP:TGC76556.1;Name=TGC76556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454933.1;locus_tag=C9F09_26565;product=glutamate 5-kinase;protein_id=TGC76556.1;transl_table=11 PYKB01001527.1 Genbank gene 3758 4810 . + . ID=gene-C9F09_26570;Name=C9F09_26570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26570 PYKB01001527.1 Protein Homology CDS 3758 4810 . + 0 ID=cds-TGC76557.1;Parent=gene-C9F09_26570;Dbxref=NCBI_GP:TGC76557.1;Name=TGC76557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454932.1;locus_tag=C9F09_26570;product=phosphoporin PhoE;protein_id=TGC76557.1;transl_table=11 PYKB01001527.1 Genbank gene 4861 5262 . - . ID=gene-C9F09_26575;Name=C9F09_26575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26575 PYKB01001527.1 Protein Homology CDS 4861 5262 . - 0 ID=cds-TGC76558.1;Parent=gene-C9F09_26575;Dbxref=NCBI_GP:TGC76558.1;Name=TGC76558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454931.1;locus_tag=C9F09_26575;product=sigma factor-binding protein Crl;protein_id=TGC76558.1;transl_table=11 PYKB01001527.1 Genbank gene 5320 6564 . - . ID=gene-C9F09_26580;Name=C9F09_26580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26580 PYKB01001527.1 Protein Homology CDS 5320 6564 . - 0 ID=cds-TGC76559.1;Parent=gene-C9F09_26580;Dbxref=NCBI_GP:TGC76559.1;Name=TGC76559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454930.1;locus_tag=C9F09_26580;product=esterase;protein_id=TGC76559.1;transl_table=11 PYKB01001527.1 Genbank gene 6653 7111 . - . ID=gene-C9F09_26585;Name=C9F09_26585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26585 PYKB01001527.1 Protein Homology CDS 6653 7111 . - 0 ID=cds-TGC76560.1;Parent=gene-C9F09_26585;Dbxref=NCBI_GP:TGC76560.1;Name=TGC76560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454929.1;locus_tag=C9F09_26585;product=xanthine phosphoribosyltransferase;protein_id=TGC76560.1;transl_table=11 PYKB01001527.1 Genbank gene 7360 8364 . + . ID=gene-C9F09_26590;Name=C9F09_26590;end_range=8364,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26590;partial=true PYKB01001527.1 Protein Homology CDS 7360 8364 . + 0 ID=cds-TGC76561.1;Parent=gene-C9F09_26590;Dbxref=NCBI_GP:TGC76561.1;Name=TGC76561.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;end_range=8364,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=C9F09_26590;partial=true;product=cytosol nonspecific dipeptidase;protein_id=TGC76561.1;transl_table=11 ##sequence-region PYKB01000683.1 1 16506 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000683.1 Genbank region 1 16506 . + . ID=PYKB01000683.1:1..16506;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000683.1 Genbank gene 1 1211 . - . ID=gene-C9F09_10265;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=C9F09_10265;partial=true;start_range=.,1 PYKB01000683.1 Protein Homology CDS 1 1211 . - 0 ID=cds-TGC93917.1;Parent=gene-C9F09_10265;Dbxref=NCBI_GP:TGC93917.1;Name=TGC93917.1;gbkey=CDS;gene=fucP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458145.1;locus_tag=C9F09_10265;partial=true;product=L-fucose:H+ symporter permease;protein_id=TGC93917.1;start_range=.,1;transl_table=11 PYKB01000683.1 Genbank gene 1242 2162 . - . ID=gene-C9F09_10270;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=C9F09_10270 PYKB01000683.1 Protein Homology CDS 1242 2162 . - 0 ID=cds-TGC93918.1;Parent=gene-C9F09_10270;Dbxref=NCBI_GP:TGC93918.1;Name=TGC93918.1;gbkey=CDS;gene=rbsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458144.1;locus_tag=C9F09_10270;product=ribokinase;protein_id=TGC93918.1;transl_table=11 PYKB01000683.1 Genbank gene 2487 3272 . + . ID=gene-C9F09_10275;Name=C9F09_10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10275 PYKB01000683.1 Protein Homology CDS 2487 3272 . + 0 ID=cds-TGC93919.1;Parent=gene-C9F09_10275;Dbxref=NCBI_GP:TGC93919.1;Name=TGC93919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458143.1;locus_tag=C9F09_10275;product=DeoR family transcriptional regulator;protein_id=TGC93919.1;transl_table=11 PYKB01000683.1 Genbank gene 3274 3564 . - . ID=gene-C9F09_10280;Name=C9F09_10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10280 PYKB01000683.1 Protein Homology CDS 3274 3564 . - 0 ID=cds-TGC93920.1;Parent=gene-C9F09_10280;Dbxref=NCBI_GP:TGC93920.1;Name=TGC93920.1;Note=with IlvB catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase small subunit;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458142.1;locus_tag=C9F09_10280;product=acetolactate synthase isozyme 1 small subunit;protein_id=TGC93920.1;transl_table=11 PYKB01000683.1 Genbank gene 3568 5256 . - . ID=gene-C9F09_10285;Name=C9F09_10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10285 PYKB01000683.1 Protein Homology CDS 3568 5256 . - 0 ID=cds-TGC93921.1;Parent=gene-C9F09_10285;Dbxref=NCBI_GP:TGC93921.1;Name=TGC93921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=C9F09_10285;product=acetolactate synthase large subunit;protein_id=TGC93921.1;transl_table=11 PYKB01000683.1 Genbank gene 5363 5461 . - . ID=gene-C9F09_10290;Name=C9F09_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10290 PYKB01000683.1 Protein Homology CDS 5363 5461 . - 0 ID=cds-TGC93922.1;Parent=gene-C9F09_10290;Dbxref=NCBI_GP:TGC93922.1;Name=TGC93922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458140.1;locus_tag=C9F09_10290;product=ilvB operon leader peptide IvbL;protein_id=TGC93922.1;transl_table=11 PYKB01000683.1 Genbank pseudogene 5984 6098 . + . ID=gene-C9F09_10295;Name=C9F09_10295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10295;pseudo=true PYKB01000683.1 Protein Homology CDS 5984 6098 . + 0 ID=cds-C9F09_10295;Parent=gene-C9F09_10295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=C9F09_10295;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000683.1 Genbank gene 6095 6184 . + . ID=gene-C9F09_10300;Name=C9F09_10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10300 PYKB01000683.1 Protein Homology CDS 6095 6184 . + 0 ID=cds-TGC93923.1;Parent=gene-C9F09_10300;Dbxref=NCBI_GP:TGC93923.1;Name=TGC93923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=C9F09_10300;product=type I toxin-antitoxin system toxin TisB;protein_id=TGC93923.1;transl_table=11 PYKB01000683.1 Genbank gene 6277 7137 . + . ID=gene-C9F09_10305;Name=C9F09_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10305 PYKB01000683.1 Protein Homology CDS 6277 7137 . + 0 ID=cds-TGC93924.1;Parent=gene-C9F09_10305;Dbxref=NCBI_GP:TGC93924.1;Name=TGC93924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=C9F09_10305;product=EamA family transporter;protein_id=TGC93924.1;transl_table=11 PYKB01000683.1 Genbank gene 7340 8524 . + . ID=gene-C9F09_10310;Name=C9F09_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10310 PYKB01000683.1 Protein Homology CDS 7340 8524 . + 0 ID=cds-TGC93925.1;Parent=gene-C9F09_10310;Dbxref=NCBI_GP:TGC93925.1;Name=TGC93925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458139.1;locus_tag=C9F09_10310;product=multidrug transporter EmrD;protein_id=TGC93925.1;transl_table=11 PYKB01000683.1 Genbank gene 8451 9536 . - . ID=gene-C9F09_10315;Name=C9F09_10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10315 PYKB01000683.1 Protein Homology CDS 8451 9536 . - 0 ID=cds-TGC93926.1;Parent=gene-C9F09_10315;Dbxref=NCBI_GP:TGC93926.1;Name=TGC93926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=C9F09_10315;product=hypothetical protein;protein_id=TGC93926.1;transl_table=11 PYKB01000683.1 Genbank gene 9600 10523 . - . ID=gene-C9F09_10320;Name=C9F09_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10320 PYKB01000683.1 Protein Homology CDS 9600 10523 . - 0 ID=cds-TGC93931.1;Parent=gene-C9F09_10320;Dbxref=NCBI_GP:TGC93931.1;Name=TGC93931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=C9F09_10320;product=DNA-binding transcriptional regulator DsdC;protein_id=TGC93931.1;transl_table=11 PYKB01000683.1 Genbank gene 10749 12086 . + . ID=gene-C9F09_10325;Name=C9F09_10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10325 PYKB01000683.1 Protein Homology CDS 10749 12086 . + 0 ID=cds-TGC93927.1;Parent=gene-C9F09_10325;Dbxref=NCBI_GP:TGC93927.1;Name=TGC93927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458136.1;locus_tag=C9F09_10325;product=D-serine transporter DsdX;protein_id=TGC93927.1;transl_table=11 PYKB01000683.1 Genbank gene 12104 13426 . + . ID=gene-C9F09_10330;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=C9F09_10330 PYKB01000683.1 Protein Homology CDS 12104 13426 . + 0 ID=cds-TGC93928.1;Parent=gene-C9F09_10330;Dbxref=NCBI_GP:TGC93928.1;Name=TGC93928.1;gbkey=CDS;gene=dsdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=C9F09_10330;product=D-serine ammonia-lyase;protein_id=TGC93928.1;transl_table=11 PYKB01000683.1 Genbank pseudogene 13508 14038 . - . ID=gene-C9F09_10335;Name=C9F09_10335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_10335;pseudo=true PYKB01000683.1 Protein Homology CDS 13508 14038 . - 0 ID=cds-C9F09_10335;Parent=gene-C9F09_10335;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458134.1;locus_tag=C9F09_10335;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000683.1 Genbank gene 14035 14397 . - . ID=gene-C9F09_10340;Name=C9F09_10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10340 PYKB01000683.1 Protein Homology CDS 14035 14397 . - 0 ID=cds-TGC93929.1;Parent=gene-C9F09_10340;Dbxref=NCBI_GP:TGC93929.1;Name=TGC93929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=C9F09_10340;product=DUF202 domain-containing protein;protein_id=TGC93929.1;transl_table=11 PYKB01000683.1 Genbank gene 14387 14734 . - . ID=gene-C9F09_10345;Name=C9F09_10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10345 PYKB01000683.1 Protein Homology CDS 14387 14734 . - 0 ID=cds-TGC93930.1;Parent=gene-C9F09_10345;Dbxref=NCBI_GP:TGC93930.1;Name=TGC93930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=C9F09_10345;product=DUF202 domain-containing protein;protein_id=TGC93930.1;transl_table=11 PYKB01000683.1 Genbank gene 15178 16506 . - . ID=gene-C9F09_10350;Name=C9F09_10350;end_range=16506,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_10350;partial=true PYKB01000683.1 Protein Homology CDS 15178 16506 . - 0 ID=cds-TGC93932.1;Parent=gene-C9F09_10350;Dbxref=NCBI_GP:TGC93932.1;Name=TGC93932.1;end_range=16506,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=C9F09_10350;partial=true;product=putative transporter;protein_id=TGC93932.1;transl_table=11 ##sequence-region PYKB01001581.1 1 1715 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001581.1 Genbank region 1 1715 . + . ID=PYKB01001581.1:1..1715;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001581.1 Genbank pseudogene 468 1658 . + . ID=gene-C9F09_27800;Name=C9F09_27800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_27800;pseudo=true PYKB01001581.1 Protein Homology CDS 468 1658 . + 0 ID=cds-C9F09_27800;Parent=gene-C9F09_27800;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458589.1;locus_tag=C9F09_27800;product=proline/glycine betaine transporter ProP;pseudo=true;transl_table=11 ##sequence-region PYKB01001469.1 1 1712 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001469.1 Genbank region 1 1712 . + . ID=PYKB01001469.1:1..1712;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001469.1 Genbank pseudogene 53 1444 . + . ID=gene-C9F09_25595;Name=C9F09_25595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_25595;pseudo=true PYKB01001469.1 Protein Homology CDS 53 1444 . + 0 ID=cds-C9F09_25595;Parent=gene-C9F09_25595;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=C9F09_25595;product=DNA gyrase subunit A;pseudo=true;transl_table=11 ##sequence-region PYKB01000426.1 1 1711 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000426.1 Genbank region 1 1711 . + . ID=PYKB01000426.1:1..1711;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000426.1 Genbank gene 25 618 . + . ID=gene-C9F09_05010;Name=C9F09_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05010 PYKB01000426.1 Protein Homology CDS 25 618 . + 0 ID=cds-TGC99101.1;Parent=gene-C9F09_05010;Dbxref=NCBI_GP:TGC99101.1;Name=TGC99101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001785230.1;locus_tag=C9F09_05010;product=AraC family transcriptional regulator;protein_id=TGC99101.1;transl_table=11 PYKB01000426.1 Genbank gene 605 958 . - . ID=gene-C9F09_05015;Name=C9F09_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05015 PYKB01000426.1 Protein Homology CDS 605 958 . - 0 ID=cds-TGC99100.1;Parent=gene-C9F09_05015;Dbxref=NCBI_GP:TGC99100.1;Name=TGC99100.1;Note=FrwD with FrwB%2C FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell%3B phosphorylated by EIIA%3B FrwB homolog;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462996.1;locus_tag=C9F09_05015;product=PTS fructose-like transporter subunit EIIB;protein_id=TGC99100.1;transl_table=11 PYKB01000426.1 Genbank pseudogene 960 1711 . - . ID=gene-C9F09_05020;Name=C9F09_05020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05020;pseudo=true PYKB01000426.1 Protein Homology CDS 960 1711 . - 2 ID=cds-C9F09_05020;Parent=gene-C9F09_05020;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462995.1;locus_tag=C9F09_05020;product=[formate-C-acetyltransferase]-activating enzyme;pseudo=true;transl_table=11 ##sequence-region PYKB01001561.1 1 1710 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001561.1 Genbank region 1 1710 . + . ID=PYKB01001561.1:1..1710;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001561.1 Genbank gene 1 395 . - . ID=gene-C9F09_27255;Name=C9F09_27255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_27255;partial=true;start_range=.,1 PYKB01001561.1 Protein Homology CDS 1 395 . - 0 ID=cds-TGC75782.1;Parent=gene-C9F09_27255;Dbxref=NCBI_GP:TGC75782.1;Name=TGC75782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455215.1;locus_tag=C9F09_27255;partial=true;product=rod shape-determining protein RodA;protein_id=TGC75782.1;start_range=.,1;transl_table=11 PYKB01001561.1 Genbank gene 398 1710 . - . ID=gene-C9F09_27260;Name=mrdA;end_range=1710,.;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=C9F09_27260;partial=true PYKB01001561.1 Protein Homology CDS 398 1710 . - 2 ID=cds-TGC75783.1;Parent=gene-C9F09_27260;Dbxref=NCBI_GP:TGC75783.1;Name=TGC75783.1;end_range=1710,.;gbkey=CDS;gene=mrdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=C9F09_27260;partial=true;product=penicillin-binding protein 2;protein_id=TGC75783.1;transl_table=11 ##sequence-region PYKB01000445.1 1 1710 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000445.1 Genbank region 1 1710 . + . ID=PYKB01000445.1:1..1710;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000445.1 Genbank gene 1 454 . + . ID=gene-C9F09_05530;Name=C9F09_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05530;partial=true;start_range=.,1 PYKB01000445.1 Protein Homology CDS 1 454 . + 1 ID=cds-TGC98722.1;Parent=gene-C9F09_05530;Dbxref=NCBI_GP:TGC98722.1;Name=TGC98722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=C9F09_05530;partial=true;product=metal ABC transporter substrate-binding protein;protein_id=TGC98722.1;start_range=.,1;transl_table=11 PYKB01000445.1 Genbank gene 491 1507 . + . ID=gene-C9F09_05535;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=C9F09_05535 PYKB01000445.1 Protein Homology CDS 491 1507 . + 0 ID=cds-TGC98723.1;Parent=gene-C9F09_05535;Dbxref=NCBI_GP:TGC98723.1;Name=TGC98723.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=C9F09_05535;product=methionine import ATP-binding protein MetN 2;protein_id=TGC98723.1;transl_table=11 PYKB01000445.1 Genbank gene 1500 1710 . + . ID=gene-C9F09_05540;Name=C9F09_05540;end_range=1710,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05540;partial=true PYKB01000445.1 Protein Homology CDS 1500 1710 . + 0 ID=cds-TGC98724.1;Parent=gene-C9F09_05540;Dbxref=NCBI_GP:TGC98724.1;Name=TGC98724.1;end_range=1710,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455107.1;locus_tag=C9F09_05540;partial=true;product=methionine ABC transporter permease;protein_id=TGC98724.1;transl_table=11 ##sequence-region PYKB01000178.1 1 1705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000178.1 Genbank region 1 1705 . + . ID=PYKB01000178.1:1..1705;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000178.1 Genbank gene 1 149 . + . ID=gene-C9F09_01990;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;gene_synonym=yicM;locus_tag=C9F09_01990;partial=true;start_range=.,1 PYKB01000178.1 Protein Homology CDS 1 149 . + 2 ID=cds-TGD03840.1;Parent=gene-C9F09_01990;Dbxref=NCBI_GP:TGD03840.1;Name=TGD03840.1;Note=experimental results in Escherichia coli suggest that this gene encodes an inosine export protein%3B member of major facilitator superfamily%3B MFS;gbkey=CDS;gene=nepI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458159.1;locus_tag=C9F09_01990;partial=true;product=MFS transporter;protein_id=TGD03840.1;start_range=.,1;transl_table=11 PYKB01000178.1 Genbank gene 209 1591 . - . ID=gene-C9F09_01995;Name=C9F09_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01995 PYKB01000178.1 Protein Homology CDS 209 1591 . - 0 ID=cds-TGD03841.1;Parent=gene-C9F09_01995;Dbxref=NCBI_GP:TGD03841.1;Name=TGD03841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=C9F09_01995;product=6-phospho-beta-glucosidase;protein_id=TGD03841.1;transl_table=11 ##sequence-region PYKB01000478.1 1 1702 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000478.1 Genbank region 1 1702 . + . ID=PYKB01000478.1:1..1702;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000478.1 Genbank gene 1 735 . - . ID=gene-C9F09_05995;Name=C9F09_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05995;partial=true;start_range=.,1 PYKB01000478.1 Protein Homology CDS 1 735 . - 0 ID=cds-TGC98131.1;Parent=gene-C9F09_05995;Dbxref=NCBI_GP:TGC98131.1;Name=TGC98131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=C9F09_05995;partial=true;product=phosphoglycerate dehydrogenase;protein_id=TGC98131.1;start_range=.,1;transl_table=11 PYKB01000478.1 Genbank gene 1002 1702 . - . ID=gene-C9F09_06000;Name=C9F09_06000;end_range=1702,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06000;partial=true PYKB01000478.1 Protein Homology CDS 1002 1702 . - 2 ID=cds-TGC98132.1;Parent=gene-C9F09_06000;Dbxref=NCBI_GP:TGC98132.1;Name=TGC98132.1;Note=catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;end_range=1702,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457461.1;locus_tag=C9F09_06000;partial=true;product=ribose 5-phosphate isomerase A;protein_id=TGC98132.1;transl_table=11 ##sequence-region PYKB01000433.1 1 1700 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000433.1 Genbank region 1 1700 . + . ID=PYKB01000433.1:1..1700;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000433.1 Genbank gene 1 285 . - . ID=gene-C9F09_05210;Name=C9F09_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05210;partial=true;start_range=.,1 PYKB01000433.1 Protein Homology CDS 1 285 . - 0 ID=cds-TGC98934.1;Parent=gene-C9F09_05210;Dbxref=NCBI_GP:TGC98934.1;Name=TGC98934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458161.1;locus_tag=C9F09_05210;partial=true;product=hypothetical protein;protein_id=TGC98934.1;start_range=.,1;transl_table=11 PYKB01000433.1 Genbank gene 482 1700 . + . ID=gene-C9F09_05215;Name=dagR;end_range=1700,.;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=C9F09_05215;partial=true PYKB01000433.1 Protein Homology CDS 482 1700 . + 0 ID=cds-TGC98935.1;Parent=gene-C9F09_05215;Dbxref=NCBI_GP:TGC98935.1;Name=TGC98935.1;end_range=1700,.;gbkey=CDS;gene=dagR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=C9F09_05215;partial=true;product=transcriptional regulator DagR;protein_id=TGC98935.1;transl_table=11 ##sequence-region PYKB01000737.1 1 1698 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000737.1 Genbank region 1 1698 . + . ID=PYKB01000737.1:1..1698;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000737.1 Genbank gene 1 1066 . - . ID=gene-C9F09_11325;Name=C9F09_11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11325;partial=true;start_range=.,1 PYKB01000737.1 Protein Homology CDS 1 1066 . - 0 ID=cds-TGC93175.1;Parent=gene-C9F09_11325;Dbxref=NCBI_GP:TGC93175.1;Name=TGC93175.1;Note=Fep%3B Cbt%3B Cbr%3B FeuB%3B FepA%3B PfeA%3B IroN%3B BfeA%3B outer membrane receptor of ferric enterobactin and colicins B and D%3B interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455162.1;locus_tag=C9F09_11325;partial=true;product=TonB-dependent siderophore receptor;protein_id=TGC93175.1;start_range=.,1;transl_table=11 PYKB01000737.1 Genbank gene 1255 1698 . + . ID=gene-C9F09_11330;Name=C9F09_11330;end_range=1698,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11330;partial=true PYKB01000737.1 Protein Homology CDS 1255 1698 . + 0 ID=cds-TGC93176.1;Parent=gene-C9F09_11330;Dbxref=NCBI_GP:TGC93176.1;Name=TGC93176.1;end_range=1698,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=C9F09_11330;partial=true;product=enterochelin esterase;protein_id=TGC93176.1;transl_table=11 ##sequence-region PYKB01001523.1 1 8322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001523.1 Genbank region 1 8322 . + . ID=PYKB01001523.1:1..8322;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001523.1 Genbank gene 1 1033 . + . ID=gene-C9F09_26400;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=C9F09_26400;partial=true;start_range=.,1 PYKB01001523.1 Protein Homology CDS 1 1033 . + 1 ID=cds-TGC76684.1;Parent=gene-C9F09_26400;Dbxref=NCBI_GP:TGC76684.1;Name=TGC76684.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458107.1;locus_tag=C9F09_26400;partial=true;product=DNA gyrase subunit B;protein_id=TGC76684.1;start_range=.,1;transl_table=11 PYKB01001523.1 Genbank gene 1384 2076 . - . ID=gene-C9F09_26405;Name=C9F09_26405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26405 PYKB01001523.1 Protein Homology CDS 1384 2076 . - 0 ID=cds-TGC76685.1;Parent=gene-C9F09_26405;Dbxref=NCBI_GP:TGC76685.1;Name=TGC76685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000691472.1;locus_tag=C9F09_26405;product=hypothetical protein;protein_id=TGC76685.1;transl_table=11 PYKB01001523.1 Genbank gene 2516 3328 . + . ID=gene-C9F09_26410;Name=C9F09_26410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26410 PYKB01001523.1 Protein Homology CDS 2516 3328 . + 0 ID=cds-TGC76686.1;Parent=gene-C9F09_26410;Dbxref=NCBI_GP:TGC76686.1;Name=TGC76686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458111.1;locus_tag=C9F09_26410;product=Cof-type HAD-IIB family hydrolase;protein_id=TGC76686.1;transl_table=11 PYKB01001523.1 Genbank gene 3530 4552 . + . ID=gene-C9F09_26415;Name=C9F09_26415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26415 PYKB01001523.1 Protein Homology CDS 3530 4552 . + 0 ID=cds-TGC76687.1;Parent=gene-C9F09_26415;Dbxref=NCBI_GP:TGC76687.1;Name=TGC76687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458112.1;locus_tag=C9F09_26415;product=hypothetical protein;protein_id=TGC76687.1;transl_table=11 PYKB01001523.1 Genbank gene 4549 5688 . + . ID=gene-C9F09_26420;Name=C9F09_26420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26420 PYKB01001523.1 Protein Homology CDS 4549 5688 . + 0 ID=cds-TGC76688.1;Parent=gene-C9F09_26420;Dbxref=NCBI_GP:TGC76688.1;Name=TGC76688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458113.1;locus_tag=C9F09_26420;product=hypothetical protein;protein_id=TGC76688.1;transl_table=11 PYKB01001523.1 Genbank gene 5685 6812 . + . ID=gene-C9F09_26425;Name=C9F09_26425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26425 PYKB01001523.1 Protein Homology CDS 5685 6812 . + 0 ID=cds-TGC76689.1;Parent=gene-C9F09_26425;Dbxref=NCBI_GP:TGC76689.1;Name=TGC76689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458114.1;locus_tag=C9F09_26425;product=DUF4056 domain-containing protein;protein_id=TGC76689.1;transl_table=11 PYKB01001523.1 Genbank gene 6917 8322 . - . ID=gene-C9F09_26430;Name=C9F09_26430;end_range=8322,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26430;partial=true PYKB01001523.1 Protein Homology CDS 6917 8322 . - 2 ID=cds-TGC76690.1;Parent=gene-C9F09_26430;Dbxref=NCBI_GP:TGC76690.1;Name=TGC76690.1;Note=Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide;end_range=8322,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=C9F09_26430;partial=true;product=TMAO reductase two-component system sensor histidine kinase TorS;protein_id=TGC76690.1;transl_table=11 ##sequence-region PYKB01000292.1 1 1698 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000292.1 Genbank region 1 1698 . + . ID=PYKB01000292.1:1..1698;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000292.1 Genbank gene 497 979 . - . ID=gene-C9F09_03345;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=C9F09_03345 PYKB01000292.1 Protein Homology CDS 497 979 . - 0 ID=cds-TGD01557.1;Parent=gene-C9F09_03345;Dbxref=NCBI_GP:TGD01557.1;Name=TGD01557.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457157.1;locus_tag=C9F09_03345;product=SsrA-binding protein;protein_id=TGD01557.1;transl_table=11 PYKB01000292.1 Genbank gene 1129 1605 . + . ID=gene-C9F09_03350;Name=C9F09_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03350 PYKB01000292.1 Protein Homology CDS 1129 1605 . + 0 ID=cds-TGD01556.1;Parent=gene-C9F09_03350;Dbxref=NCBI_GP:TGD01556.1;Name=TGD01556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457156.1;locus_tag=C9F09_03350;product=type II toxin-antitoxin system RatA family toxin;protein_id=TGD01556.1;transl_table=11 ##sequence-region PYKB01001020.1 1 1697 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001020.1 Genbank region 1 1697 . + . ID=PYKB01001020.1:1..1697;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001020.1 Genbank gene 1 212 . + . ID=gene-C9F09_17050;Name=C9F09_17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17050;partial=true;start_range=.,1 PYKB01001020.1 Protein Homology CDS 1 212 . + 2 ID=cds-TGC87792.1;Parent=gene-C9F09_17050;Dbxref=NCBI_GP:TGC87792.1;Name=TGC87792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133895.1;locus_tag=C9F09_17050;partial=true;product=hypothetical protein;protein_id=TGC87792.1;start_range=.,1;transl_table=11 PYKB01001020.1 Genbank gene 169 1017 . + . ID=gene-C9F09_17055;Name=C9F09_17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17055 PYKB01001020.1 Protein Homology CDS 169 1017 . + 0 ID=cds-TGC87793.1;Parent=gene-C9F09_17055;Dbxref=NCBI_GP:TGC87793.1;Name=TGC87793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=C9F09_17055;product=HTH-type transcriptional activator RhaR;protein_id=TGC87793.1;transl_table=11 PYKB01001020.1 Genbank gene 1014 1697 . - . ID=gene-C9F09_17060;Name=C9F09_17060;end_range=1697,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17060;partial=true PYKB01001020.1 Protein Homology CDS 1014 1697 . - 0 ID=cds-TGC87794.1;Parent=gene-C9F09_17060;Dbxref=NCBI_GP:TGC87794.1;Name=TGC87794.1;Note=transports L-rhamnose and L-lyxose into the cell;end_range=1697,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=C9F09_17060;partial=true;product=rhamnose/proton symporter RhaT;protein_id=TGC87794.1;transl_table=11 ##sequence-region PYKB01001161.1 1 1695 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001161.1 Genbank region 1 1695 . + . ID=PYKB01001161.1:1..1695;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001161.1 Genbank gene 1 154 . - . ID=gene-C9F09_19620;Name=C9F09_19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19620;partial=true;start_range=.,1 PYKB01001161.1 Protein Homology CDS 1 154 . - 0 ID=cds-TGC84503.1;Parent=gene-C9F09_19620;Dbxref=NCBI_GP:TGC84503.1;Name=TGC84503.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455317.1;locus_tag=C9F09_19620;partial=true;product=galactose-1-phosphate uridylyltransferase;protein_id=TGC84503.1;start_range=.,1;transl_table=11 PYKB01001161.1 Genbank pseudogene 165 1181 . - . ID=gene-C9F09_19625;Name=galE;gbkey=Gene;gene=galE;gene_biotype=pseudogene;locus_tag=C9F09_19625;pseudo=true PYKB01001161.1 Protein Homology CDS 165 1181 . - 0 ID=cds-C9F09_19625;Parent=gene-C9F09_19625;Note=internal stop;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=C9F09_19625;product=UDP-glucose 4-epimerase GalE;pseudo=true;transl_table=11 PYKB01001161.1 Genbank pseudogene 1404 1695 . - . ID=gene-C9F09_19630;Name=C9F09_19630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_19630;pseudo=true PYKB01001161.1 Protein Homology CDS 1404 1695 . - 1 ID=cds-C9F09_19630;Parent=gene-C9F09_19630;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=C9F09_19630;product=DUF2167 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000946.1 1 1695 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000946.1 Genbank region 1 1695 . + . ID=PYKB01000946.1:1..1695;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000946.1 Genbank gene 220 504 . + . ID=gene-C9F09_15605;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=C9F09_15605 PYKB01000946.1 Protein Homology CDS 220 504 . + 0 ID=cds-TGC89389.1;Parent=gene-C9F09_15605;Dbxref=NCBI_GP:TGC89389.1;Name=TGC89389.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456588.1;locus_tag=C9F09_15605;product=propanediol utilization microcompartment protein PduA;protein_id=TGC89389.1;transl_table=11 PYKB01000946.1 Genbank gene 501 1313 . + . ID=gene-C9F09_15610;Name=C9F09_15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15610 PYKB01000946.1 Protein Homology CDS 501 1313 . + 0 ID=cds-TGC89390.1;Parent=gene-C9F09_15610;Dbxref=NCBI_GP:TGC89390.1;Name=TGC89390.1;Note=carboxysome shell protein%3B may be involved in the formation of the polyhedral organelles involved in propanediol degradation;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002413051.1;locus_tag=C9F09_15610;product=propanediol utilization microcompartment protein PduB;protein_id=TGC89390.1;transl_table=11 PYKB01000946.1 Genbank gene 1332 1695 . + . ID=gene-C9F09_15615;Name=C9F09_15615;end_range=1695,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15615;partial=true PYKB01000946.1 Protein Homology CDS 1332 1695 . + 0 ID=cds-TGC89391.1;Parent=gene-C9F09_15615;Dbxref=NCBI_GP:TGC89391.1;Name=TGC89391.1;end_range=1695,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456590.1;locus_tag=C9F09_15615;partial=true;product=propanediol dehydratase;protein_id=TGC89391.1;transl_table=11 ##sequence-region PYKB01000519.1 1 1692 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000519.1 Genbank region 1 1692 . + . ID=PYKB01000519.1:1..1692;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000519.1 Genbank gene 1 201 . + . ID=gene-C9F09_06945;Name=C9F09_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06945;partial=true;start_range=.,1 PYKB01000519.1 Protein Homology CDS 1 201 . + 0 ID=cds-TGC97156.1;Parent=gene-C9F09_06945;Dbxref=NCBI_GP:TGC97156.1;Name=TGC97156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=C9F09_06945;partial=true;product=histidine kinase;protein_id=TGC97156.1;start_range=.,1;transl_table=11 PYKB01000519.1 Genbank gene 204 866 . - . ID=gene-C9F09_06950;Name=C9F09_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06950 PYKB01000519.1 Protein Homology CDS 204 866 . - 0 ID=cds-TGC97157.1;Parent=gene-C9F09_06950;Dbxref=NCBI_GP:TGC97157.1;Name=TGC97157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=C9F09_06950;product=acrEF/envCD operon transcriptional regulator;protein_id=TGC97157.1;transl_table=11 PYKB01000519.1 Genbank gene 1280 1692 . + . ID=gene-C9F09_06955;Name=C9F09_06955;end_range=1692,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06955;partial=true PYKB01000519.1 Protein Homology CDS 1280 1692 . + 0 ID=cds-TGC97158.1;Parent=gene-C9F09_06955;Dbxref=NCBI_GP:TGC97158.1;Name=TGC97158.1;end_range=1692,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=C9F09_06955;partial=true;product=efflux RND transporter periplasmic adaptor subunit;protein_id=TGC97158.1;transl_table=11 ##sequence-region PYKB01001211.1 1 1685 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001211.1 Genbank region 1 1685 . + . ID=PYKB01001211.1:1..1685;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001211.1 Genbank gene 1 106 . + . ID=gene-C9F09_20610;Name=C9F09_20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20610;partial=true;start_range=.,1 PYKB01001211.1 Protein Homology CDS 1 106 . + 1 ID=cds-TGC83342.1;Parent=gene-C9F09_20610;Dbxref=NCBI_GP:TGC83342.1;Name=TGC83342.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=C9F09_20610;partial=true;product=glutaminase;protein_id=TGC83342.1;start_range=.,1;transl_table=11 PYKB01001211.1 Genbank gene 106 465 . + . ID=gene-C9F09_20615;Name=C9F09_20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20615 PYKB01001211.1 Protein Homology CDS 106 465 . + 0 ID=cds-TGC83343.1;Parent=gene-C9F09_20615;Dbxref=NCBI_GP:TGC83343.1;Name=TGC83343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455955.1;locus_tag=C9F09_20615;product=DUF4186 domain-containing protein;protein_id=TGC83343.1;transl_table=11 PYKB01001211.1 Genbank gene 689 1636 . + . ID=gene-C9F09_20620;Name=C9F09_20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20620 PYKB01001211.1 Protein Homology CDS 689 1636 . + 0 ID=cds-TGC83344.1;Parent=gene-C9F09_20620;Dbxref=NCBI_GP:TGC83344.1;Name=TGC83344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455954.1;locus_tag=C9F09_20620;product=hypothetical protein;protein_id=TGC83344.1;transl_table=11 ##sequence-region PYKB01001665.1 1 1682 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001665.1 Genbank region 1 1682 . + . ID=PYKB01001665.1:1..1682;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001665.1 Genbank gene 1 371 . + . ID=gene-C9F09_28990;Name=C9F09_28990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28990;partial=true;start_range=.,1 PYKB01001665.1 Protein Homology CDS 1 371 . + 2 ID=cds-TGC73183.1;Parent=gene-C9F09_28990;Dbxref=NCBI_GP:TGC73183.1;Name=TGC73183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456546.1;locus_tag=C9F09_28990;partial=true;product=hypothetical protein;protein_id=TGC73183.1;start_range=.,1;transl_table=11 PYKB01001665.1 Genbank pseudogene 302 1660 . - . ID=gene-C9F09_28995;Name=C9F09_28995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28995;pseudo=true PYKB01001665.1 Protein Homology CDS 302 1660 . - 0 ID=cds-C9F09_28995;Parent=gene-C9F09_28995;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=C9F09_28995;product=cellulose biosynthesis regulator YedQ;pseudo=true;transl_table=11 ##sequence-region PYKB01001637.1 1 1671 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001637.1 Genbank region 1 1671 . + . ID=PYKB01001637.1:1..1671;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001637.1 Genbank gene 1 1169 . + . ID=gene-C9F09_28605;Name=C9F09_28605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28605;partial=true;start_range=.,1 PYKB01001637.1 Protein Homology CDS 1 1169 . + 2 ID=cds-TGC73932.1;Parent=gene-C9F09_28605;Dbxref=NCBI_GP:TGC73932.1;Name=TGC73932.1;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457591.1;locus_tag=C9F09_28605;partial=true;product=bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase;protein_id=TGC73932.1;start_range=.,1;transl_table=11 PYKB01001637.1 Genbank pseudogene 1276 1547 . - . ID=gene-C9F09_28610;Name=C9F09_28610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_28610;pseudo=true PYKB01001637.1 Protein Homology CDS 1276 1547 . - 0 ID=cds-C9F09_28610;Parent=gene-C9F09_28610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001406537.1;locus_tag=C9F09_28610;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000126.1 1 1664 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000126.1 Genbank region 1 1664 . + . ID=PYKB01000126.1:1..1664;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000126.1 Genbank gene 79 1632 . + . ID=gene-C9F09_01450;Name=C9F09_01450;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F09_01450 PYKB01000126.1 Genbank rRNA 79 1632 . + . ID=rna-C9F09_01450;Parent=gene-C9F09_01450;gbkey=rRNA;locus_tag=C9F09_01450;product=16S ribosomal RNA PYKB01000126.1 Genbank exon 79 1632 . + . ID=exon-C9F09_01450-1;Parent=rna-C9F09_01450;gbkey=rRNA;locus_tag=C9F09_01450;product=16S ribosomal RNA ##sequence-region PYKB01000777.1 1 1661 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000777.1 Genbank region 1 1661 . + . ID=PYKB01000777.1:1..1661;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000777.1 Genbank pseudogene 1 470 . - . ID=gene-C9F09_12035;Name=C9F09_12035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12035;pseudo=true PYKB01000777.1 Protein Homology CDS 1 470 . - 0 ID=cds-C9F09_12035;Parent=gene-C9F09_12035;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517118.1;locus_tag=C9F09_12035;product=DNA-binding protein;pseudo=true;transl_table=11 PYKB01000777.1 Genbank pseudogene 947 1420 . - . ID=gene-C9F09_12040;Name=C9F09_12040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12040;pseudo=true PYKB01000777.1 Protein Homology CDS 947 1420 . - 0 ID=cds-C9F09_12040;Parent=gene-C9F09_12040;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460952.1;locus_tag=C9F09_12040;product=peptidase;pseudo=true;transl_table=11 PYKB01000777.1 Genbank gene 1584 1659 . - . ID=gene-C9F09_12045;Name=C9F09_12045;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_12045 PYKB01000777.1 tRNAscan-SE tRNA 1584 1659 . - . ID=rna-C9F09_12045;Parent=gene-C9F09_12045;anticodon=(pos:complement(1624..1626));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_12045;product=tRNA-Asn PYKB01000777.1 tRNAscan-SE exon 1584 1659 . - . ID=exon-C9F09_12045-1;Parent=rna-C9F09_12045;anticodon=(pos:complement(1624..1626));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_12045;product=tRNA-Asn ##sequence-region PYKB01000947.1 1 8261 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000947.1 Genbank region 1 8261 . + . ID=PYKB01000947.1:1..8261;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000947.1 Genbank gene 1 514 . + . ID=gene-C9F09_15620;Name=C9F09_15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15620;partial=true;start_range=.,1 PYKB01000947.1 Protein Homology CDS 1 514 . + 1 ID=cds-TGC89330.1;Parent=gene-C9F09_15620;Dbxref=NCBI_GP:TGC89330.1;Name=TGC89330.1;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=C9F09_15620;partial=true;product=ATP-dependent RNA helicase SrmB;protein_id=TGC89330.1;start_range=.,1;transl_table=11 PYKB01000947.1 Genbank gene 532 1431 . - . ID=gene-C9F09_15625;Name=C9F09_15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15625 PYKB01000947.1 Protein Homology CDS 532 1431 . - 0 ID=cds-TGC89338.1;Parent=gene-C9F09_15625;Dbxref=NCBI_GP:TGC89338.1;Name=TGC89338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=C9F09_15625;product=LysR family transcriptional regulator;protein_id=TGC89338.1;transl_table=11 PYKB01000947.1 Genbank gene 1534 2121 . + . ID=gene-C9F09_15630;Name=C9F09_15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15630 PYKB01000947.1 Protein Homology CDS 1534 2121 . + 0 ID=cds-TGC89331.1;Parent=gene-C9F09_15630;Dbxref=NCBI_GP:TGC89331.1;Name=TGC89331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457120.1;locus_tag=C9F09_15630;product=cysteine/O-acetylserine efflux protein;protein_id=TGC89331.1;transl_table=11 PYKB01000947.1 Genbank gene 2183 2566 . - . ID=gene-C9F09_15635;Name=C9F09_15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15635 PYKB01000947.1 Protein Homology CDS 2183 2566 . - 0 ID=cds-TGC89332.1;Parent=gene-C9F09_15635;Dbxref=NCBI_GP:TGC89332.1;Name=TGC89332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457121.1;locus_tag=C9F09_15635;product=autonomous glycyl radical cofactor GrcA;protein_id=TGC89332.1;transl_table=11 PYKB01000947.1 Genbank gene 2885 3574 . + . ID=gene-C9F09_15640;Name=C9F09_15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15640 PYKB01000947.1 Protein Homology CDS 2885 3574 . + 0 ID=cds-TGC89333.1;Parent=gene-C9F09_15640;Dbxref=NCBI_GP:TGC89333.1;Name=TGC89333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457122.1;locus_tag=C9F09_15640;product=uracil-DNA glycosylase;protein_id=TGC89333.1;transl_table=11 PYKB01000947.1 Genbank gene 3690 4727 . - . ID=gene-C9F09_15645;Name=C9F09_15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15645 PYKB01000947.1 Protein Homology CDS 3690 4727 . - 0 ID=cds-TGC89334.1;Parent=gene-C9F09_15645;Dbxref=NCBI_GP:TGC89334.1;Name=TGC89334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457123.1;locus_tag=C9F09_15645;product=tRNA/rRNA methyltransferase;protein_id=TGC89334.1;transl_table=11 PYKB01000947.1 Genbank gene 4931 5350 . + . ID=gene-C9F09_15650;Name=C9F09_15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15650 PYKB01000947.1 Protein Homology CDS 4931 5350 . + 0 ID=cds-TGC89335.1;Parent=gene-C9F09_15650;Dbxref=NCBI_GP:TGC89335.1;Name=TGC89335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=C9F09_15650;product=thioredoxin TrxC;protein_id=TGC89335.1;transl_table=11 PYKB01000947.1 Genbank gene 5423 6103 . + . ID=gene-C9F09_15655;Name=C9F09_15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15655 PYKB01000947.1 Protein Homology CDS 5423 6103 . + 0 ID=cds-TGC89336.1;Parent=gene-C9F09_15655;Dbxref=NCBI_GP:TGC89336.1;Name=TGC89336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457125.1;locus_tag=C9F09_15655;product=DTW domain-containing protein;protein_id=TGC89336.1;transl_table=11 PYKB01000947.1 Genbank gene 6157 8261 . + . ID=gene-C9F09_15660;Name=pat;end_range=8261,.;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=C9F09_15660;partial=true PYKB01000947.1 Protein Homology CDS 6157 8261 . + 0 ID=cds-TGC89337.1;Parent=gene-C9F09_15660;Dbxref=NCBI_GP:TGC89337.1;Name=TGC89337.1;end_range=8261,.;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=C9F09_15660;partial=true;product=protein lysine acetyltransferase;protein_id=TGC89337.1;transl_table=11 ##sequence-region PYKB01001268.1 1 1656 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001268.1 Genbank region 1 1656 . + . ID=PYKB01001268.1:1..1656;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001268.1 Genbank pseudogene 37 741 . - . ID=gene-C9F09_21700;Name=C9F09_21700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21700;pseudo=true PYKB01001268.1 Protein Homology CDS 37 741 . - 0 ID=cds-C9F09_21700;Parent=gene-C9F09_21700;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458190.1;locus_tag=C9F09_21700;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 PYKB01001268.1 Genbank gene 815 1656 . + . ID=gene-C9F09_21705;Name=C9F09_21705;end_range=1656,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21705;partial=true PYKB01001268.1 Protein Homology CDS 815 1656 . + 0 ID=cds-TGC82226.1;Parent=gene-C9F09_21705;Dbxref=NCBI_GP:TGC82226.1;Name=TGC82226.1;end_range=1656,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=C9F09_21705;partial=true;product=MBL fold protein;protein_id=TGC82226.1;transl_table=11 ##sequence-region PYKB01000725.1 1 1650 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000725.1 Genbank region 1 1650 . + . ID=PYKB01000725.1:1..1650;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000725.1 Genbank gene 1 560 . - . ID=gene-C9F09_11090;Name=C9F09_11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11090;partial=true;start_range=.,1 PYKB01000725.1 Protein Homology CDS 1 560 . - 0 ID=cds-TGC93403.1;Parent=gene-C9F09_11090;Dbxref=NCBI_GP:TGC93403.1;Name=TGC93403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=C9F09_11090;partial=true;product=YigZ family protein;protein_id=TGC93403.1;start_range=.,1;transl_table=11 PYKB01000725.1 Genbank gene 560 1650 . - . ID=gene-C9F09_11095;Name=C9F09_11095;end_range=1650,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11095;partial=true PYKB01000725.1 Protein Homology CDS 560 1650 . - 2 ID=cds-TGC93404.1;Parent=gene-C9F09_11095;Dbxref=NCBI_GP:TGC93404.1;Name=TGC93404.1;end_range=1650,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=C9F09_11095;partial=true;product=Xaa-Pro dipeptidase;protein_id=TGC93404.1;transl_table=11 ##sequence-region PYKB01000614.1 1 1643 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000614.1 Genbank region 1 1643 . + . ID=PYKB01000614.1:1..1643;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000614.1 Genbank gene 1 128 . - . ID=gene-C9F09_09105;Name=C9F09_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09105;partial=true;start_range=.,1 PYKB01000614.1 Protein Homology CDS 1 128 . - 0 ID=cds-TGC95088.1;Parent=gene-C9F09_09105;Dbxref=NCBI_GP:TGC95088.1;Name=TGC95088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000918118.1;locus_tag=C9F09_09105;partial=true;product=hypothetical protein;protein_id=TGC95088.1;start_range=.,1;transl_table=11 PYKB01000614.1 Genbank gene 269 1643 . - . ID=gene-C9F09_09110;Name=hrpB;end_range=1643,.;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=C9F09_09110;partial=true PYKB01000614.1 Protein Homology CDS 269 1643 . - 1 ID=cds-TGC95087.1;Parent=gene-C9F09_09110;Dbxref=NCBI_GP:TGC95087.1;Name=TGC95087.1;end_range=1643,.;gbkey=CDS;gene=hrpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459194.1;locus_tag=C9F09_09110;partial=true;product=ATP-dependent helicase HrpB;protein_id=TGC95087.1;transl_table=11 ##sequence-region PYKB01001176.1 1 1643 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001176.1 Genbank region 1 1643 . + . ID=PYKB01001176.1:1..1643;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001176.1 Genbank gene 1 1117 . + . ID=gene-C9F09_19835;Name=C9F09_19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19835;partial=true;start_range=.,1 PYKB01001176.1 Protein Homology CDS 1 1117 . + 1 ID=cds-TGC84152.1;Parent=gene-C9F09_19835;Dbxref=NCBI_GP:TGC84152.1;Name=TGC84152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=C9F09_19835;partial=true;product=fimbrial assembly protein;protein_id=TGC84152.1;start_range=.,1;transl_table=11 PYKB01001176.1 Genbank gene 1126 1643 . + . ID=gene-C9F09_19840;Name=C9F09_19840;end_range=1643,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19840;partial=true PYKB01001176.1 Protein Homology CDS 1126 1643 . + 0 ID=cds-TGC84153.1;Parent=gene-C9F09_19840;Dbxref=NCBI_GP:TGC84153.1;Name=TGC84153.1;end_range=1643,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000794031.1;locus_tag=C9F09_19840;partial=true;product=fimbrial protein StiH;protein_id=TGC84153.1;transl_table=11 ##sequence-region PYKB01000300.1 1 1642 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000300.1 Genbank region 1 1642 . + . ID=PYKB01000300.1:1..1642;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000300.1 Genbank gene 1 784 . + . ID=gene-C9F09_03395;Name=C9F09_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03395;partial=true;start_range=.,1 PYKB01000300.1 Protein Homology CDS 1 784 . + 1 ID=cds-TGD01470.1;Parent=gene-C9F09_03395;Dbxref=NCBI_GP:TGD01470.1;Name=TGD01470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455409.1;locus_tag=C9F09_03395;partial=true;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=TGD01470.1;start_range=.,1;transl_table=11 PYKB01000300.1 Genbank gene 1079 1642 . + . ID=gene-C9F09_03400;Name=C9F09_03400;end_range=1642,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03400;partial=true PYKB01000300.1 Protein Homology CDS 1079 1642 . + 0 ID=cds-TGD01471.1;Parent=gene-C9F09_03400;Dbxref=NCBI_GP:TGD01471.1;Name=TGD01471.1;end_range=1642,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=C9F09_03400;partial=true;product=PTS ascorbate transporter subunit IIC;protein_id=TGD01471.1;transl_table=11 ##sequence-region PYKB01001304.1 1 1642 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001304.1 Genbank region 1 1642 . + . ID=PYKB01001304.1:1..1642;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001304.1 Genbank pseudogene 21 1642 . - . ID=gene-C9F09_22320;Name=C9F09_22320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_22320;pseudo=true PYKB01001304.1 Protein Homology CDS 21 1642 . - 2 ID=cds-C9F09_22320;Parent=gene-C9F09_22320;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457388.1;locus_tag=C9F09_22320;product=pitrilysin;pseudo=true;transl_table=11 ##sequence-region PYKB01000461.1 1 1634 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000461.1 Genbank region 1 1634 . + . ID=PYKB01000461.1:1..1634;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000461.1 Genbank gene 1 1634 . - . ID=gene-C9F09_05755;Name=C9F09_05755;end_range=1634,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05755;partial=true;start_range=.,1 PYKB01000461.1 Protein Homology CDS 1 1634 . - 2 ID=cds-TGC98462.1;Parent=gene-C9F09_05755;Dbxref=NCBI_GP:TGC98462.1;Name=TGC98462.1;end_range=1634,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=C9F09_05755;partial=true;product=chromosome partition protein MukB;protein_id=TGC98462.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001083.1 1 1634 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001083.1 Genbank region 1 1634 . + . ID=PYKB01001083.1:1..1634;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001083.1 Genbank gene 1 1035 . + . ID=gene-C9F09_18115;Name=C9F09_18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18115;partial=true;start_range=.,1 PYKB01001083.1 Protein Homology CDS 1 1035 . + 0 ID=cds-TGC86400.1;Parent=gene-C9F09_18115;Dbxref=NCBI_GP:TGC86400.1;Name=TGC86400.1;Note=Cir%3B FeuA%3B CirA%3B receptor protein for siderophores (colicin IA%2C IB and V) and microcins (E492%2C H47%2C and M)%3B TonB-dependent%3B able to transport monomers%2C dimer%2C and linear trimers of 2%2C3-dihydorxybenzoylserine%3B outer membrane protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=C9F09_18115;partial=true;product=catecholate siderophore receptor CirA;protein_id=TGC86400.1;start_range=.,1;transl_table=11 PYKB01001083.1 Genbank gene 1079 1612 . - . ID=gene-C9F09_18120;Name=C9F09_18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18120 PYKB01001083.1 Protein Homology CDS 1079 1612 . - 0 ID=cds-TGC86401.1;Parent=gene-C9F09_18120;Dbxref=NCBI_GP:TGC86401.1;Name=TGC86401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001567518.1;locus_tag=C9F09_18120;product=hypothetical protein;protein_id=TGC86401.1;transl_table=11 ##sequence-region PYKB01001252.1 1 1633 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001252.1 Genbank region 1 1633 . + . ID=PYKB01001252.1:1..1633;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001252.1 Genbank gene 1 590 . + . ID=gene-C9F09_21350;Name=C9F09_21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21350;partial=true;start_range=.,1 PYKB01001252.1 Protein Homology CDS 1 590 . + 2 ID=cds-TGC82390.1;Parent=gene-C9F09_21350;Dbxref=NCBI_GP:TGC82390.1;Name=TGC82390.1;Note=catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=C9F09_21350;partial=true;product=trimethylamine-N-oxide reductase TorA;protein_id=TGC82390.1;start_range=.,1;transl_table=11 PYKB01001252.1 Genbank gene 583 1215 . + . ID=gene-C9F09_21355;Name=C9F09_21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21355 PYKB01001252.1 Protein Homology CDS 583 1215 . + 0 ID=cds-TGC82391.1;Parent=gene-C9F09_21355;Dbxref=NCBI_GP:TGC82391.1;Name=TGC82391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458118.1;locus_tag=C9F09_21355;product=molecular chaperone TorD;protein_id=TGC82391.1;transl_table=11 PYKB01001252.1 Genbank gene 1405 1633 . + . ID=gene-C9F09_21360;Name=C9F09_21360;end_range=1633,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21360;partial=true PYKB01001252.1 Protein Homology CDS 1405 1633 . + 0 ID=cds-TGC82392.1;Parent=gene-C9F09_21360;Dbxref=NCBI_GP:TGC82392.1;Name=TGC82392.1;end_range=1633,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458119.1;locus_tag=C9F09_21360;partial=true;product=hypothetical protein;protein_id=TGC82392.1;transl_table=11 ##sequence-region PYKB01001363.1 1 1629 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001363.1 Genbank region 1 1629 . + . ID=PYKB01001363.1:1..1629;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001363.1 Genbank gene 597 1472 . + . ID=gene-C9F09_23385;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=C9F09_23385 PYKB01001363.1 Protein Homology CDS 597 1472 . + 0 ID=cds-TGC80280.1;Parent=gene-C9F09_23385;Dbxref=NCBI_GP:TGC80280.1;Name=TGC80280.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455586.1;locus_tag=C9F09_23385;product=SPI-2 type III secretion system effector PipB;protein_id=TGC80280.1;transl_table=11 ##sequence-region PYKB01001368.1 1 8255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001368.1 Genbank region 1 8255 . + . ID=PYKB01001368.1:1..8255;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001368.1 Genbank gene 156 1154 . + . ID=gene-C9F09_23525;Name=C9F09_23525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23525 PYKB01001368.1 Protein Homology CDS 156 1154 . + 0 ID=cds-TGC80195.1;Parent=gene-C9F09_23525;Dbxref=NCBI_GP:TGC80195.1;Name=TGC80195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463276.1;locus_tag=C9F09_23525;product=fructose 1%2C6-bisphosphatase;protein_id=TGC80195.1;transl_table=11 PYKB01001368.1 Genbank gene 1381 1911 . + . ID=gene-C9F09_23530;Name=C9F09_23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23530 PYKB01001368.1 Protein Homology CDS 1381 1911 . + 0 ID=cds-TGC80196.1;Parent=gene-C9F09_23530;Dbxref=NCBI_GP:TGC80196.1;Name=TGC80196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458851.1;locus_tag=C9F09_23530;product=inorganic pyrophosphatase;protein_id=TGC80196.1;transl_table=11 PYKB01001368.1 Genbank gene 2321 3484 . + . ID=gene-C9F09_23535;Name=C9F09_23535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23535 PYKB01001368.1 Protein Homology CDS 2321 3484 . + 0 ID=cds-TGC80197.1;Parent=gene-C9F09_23535;Dbxref=NCBI_GP:TGC80197.1;Name=TGC80197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=C9F09_23535;product=metal-dependent hydrolase;protein_id=TGC80197.1;transl_table=11 PYKB01001368.1 Genbank gene 3481 4689 . + . ID=gene-C9F09_23540;Name=C9F09_23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23540 PYKB01001368.1 Protein Homology CDS 3481 4689 . + 0 ID=cds-TGC80198.1;Parent=gene-C9F09_23540;Dbxref=NCBI_GP:TGC80198.1;Name=TGC80198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=C9F09_23540;product=MFS transporter;protein_id=TGC80198.1;transl_table=11 PYKB01001368.1 Genbank gene 4743 5087 . - . ID=gene-C9F09_23545;Name=C9F09_23545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23545 PYKB01001368.1 Protein Homology CDS 4743 5087 . - 0 ID=cds-TGC80199.1;Parent=gene-C9F09_23545;Dbxref=NCBI_GP:TGC80199.1;Name=TGC80199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458848.1;locus_tag=C9F09_23545;product=gamma-glutamylcyclotransferase;protein_id=TGC80199.1;transl_table=11 PYKB01001368.1 Genbank gene 5090 8255 . - . ID=gene-C9F09_23550;Name=tamB;end_range=8255,.;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=C9F09_23550;partial=true PYKB01001368.1 Protein Homology CDS 5090 8255 . - 1 ID=cds-TGC80200.1;Parent=gene-C9F09_23550;Dbxref=NCBI_GP:TGC80200.1;Name=TGC80200.1;end_range=8255,.;gbkey=CDS;gene=tamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=C9F09_23550;partial=true;product=autotransporter assembly complex protein TamB;protein_id=TGC80200.1;transl_table=11 ##sequence-region PYKB01001199.1 1 1627 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001199.1 Genbank region 1 1627 . + . ID=PYKB01001199.1:1..1627;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001199.1 Genbank gene 1 273 . - . ID=gene-C9F09_20430;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=C9F09_20430;partial=true;start_range=.,1 PYKB01001199.1 Protein Homology CDS 1 273 . - 0 ID=cds-TGC83542.1;Parent=gene-C9F09_20430;Dbxref=NCBI_GP:TGC83542.1;Name=TGC83542.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;gbkey=CDS;gene=fruK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311087.1;locus_tag=C9F09_20430;partial=true;product=1-phosphofructokinase;protein_id=TGC83542.1;start_range=.,1;transl_table=11 PYKB01001199.1 Genbank gene 273 1403 . - . ID=gene-C9F09_20435;Name=C9F09_20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20435 PYKB01001199.1 Protein Homology CDS 273 1403 . - 0 ID=cds-TGC83543.1;Parent=gene-C9F09_20435;Dbxref=NCBI_GP:TGC83543.1;Name=TGC83543.1;Note=phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=C9F09_20435;product=multiphosphoryl transfer protein;protein_id=TGC83543.1;transl_table=11 ##sequence-region PYKB01001043.1 1 1625 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001043.1 Genbank region 1 1625 . + . ID=PYKB01001043.1:1..1625;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001043.1 Genbank gene 1 371 . - . ID=gene-C9F09_17520;Name=C9F09_17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17520;partial=true;start_range=.,1 PYKB01001043.1 Protein Homology CDS 1 371 . - 0 ID=cds-TGC87197.1;Parent=gene-C9F09_17520;Dbxref=NCBI_GP:TGC87197.1;Name=TGC87197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=C9F09_17520;partial=true;product=NAD-dependent malic enzyme;protein_id=TGC87197.1;start_range=.,1;transl_table=11 PYKB01001043.1 Genbank gene 548 691 . - . ID=gene-C9F09_17525;Name=C9F09_17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17525 PYKB01001043.1 Protein Homology CDS 548 691 . - 0 ID=cds-TGC87198.1;Parent=gene-C9F09_17525;Dbxref=NCBI_GP:TGC87198.1;Name=TGC87198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455925.1;locus_tag=C9F09_17525;product=stationary-phase-induced ribosome-associated protein;protein_id=TGC87198.1;transl_table=11 PYKB01001043.1 Genbank gene 786 1001 . - . ID=gene-C9F09_17530;Name=C9F09_17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17530 PYKB01001043.1 Protein Homology CDS 786 1001 . - 0 ID=cds-TGC87199.1;Parent=gene-C9F09_17530;Dbxref=NCBI_GP:TGC87199.1;Name=TGC87199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455926.1;locus_tag=C9F09_17530;product=protein bdm;protein_id=TGC87199.1;transl_table=11 PYKB01001043.1 Genbank gene 1513 1625 . + . ID=gene-C9F09_17535;Name=C9F09_17535;end_range=1625,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17535;partial=true PYKB01001043.1 Protein Homology CDS 1513 1625 . + 0 ID=cds-TGC87200.1;Parent=gene-C9F09_17535;Dbxref=NCBI_GP:TGC87200.1;Name=TGC87200.1;end_range=1625,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415999.1;locus_tag=C9F09_17535;partial=true;product=peroxiredoxin;protein_id=TGC87200.1;transl_table=11 ##sequence-region PYKB01001089.1 1 1623 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001089.1 Genbank region 1 1623 . + . ID=PYKB01001089.1:1..1623;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001089.1 Genbank gene 1 414 . - . ID=gene-C9F09_18220;Name=C9F09_18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18220;partial=true;start_range=.,1 PYKB01001089.1 Protein Homology CDS 1 414 . - 0 ID=cds-TGC86271.1;Parent=gene-C9F09_18220;Dbxref=NCBI_GP:TGC86271.1;Name=TGC86271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000779217.1;locus_tag=C9F09_18220;partial=true;product=hypothetical protein;protein_id=TGC86271.1;start_range=.,1;transl_table=11 PYKB01001089.1 Genbank gene 411 923 . - . ID=gene-C9F09_18225;Name=C9F09_18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18225 PYKB01001089.1 Protein Homology CDS 411 923 . - 0 ID=cds-TGC86272.1;Parent=gene-C9F09_18225;Dbxref=NCBI_GP:TGC86272.1;Name=TGC86272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135699.1;locus_tag=C9F09_18225;product=hypothetical protein;protein_id=TGC86272.1;transl_table=11 PYKB01001089.1 Genbank gene 895 1299 . - . ID=gene-C9F09_18230;Name=C9F09_18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18230 PYKB01001089.1 Protein Homology CDS 895 1299 . - 0 ID=cds-TGC86273.1;Parent=gene-C9F09_18230;Dbxref=NCBI_GP:TGC86273.1;Name=TGC86273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000702408.1;locus_tag=C9F09_18230;product=head-tail adaptor protein;protein_id=TGC86273.1;transl_table=11 PYKB01001089.1 Genbank gene 1296 1619 . - . ID=gene-C9F09_18235;Name=C9F09_18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_18235 PYKB01001089.1 Protein Homology CDS 1296 1619 . - 0 ID=cds-TGC86274.1;Parent=gene-C9F09_18235;Dbxref=NCBI_GP:TGC86274.1;Name=TGC86274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411649.1;locus_tag=C9F09_18235;product=phage gp6-like head-tail connector protein;protein_id=TGC86274.1;transl_table=11 ##sequence-region PYKB01001409.1 1 1617 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001409.1 Genbank region 1 1617 . + . ID=PYKB01001409.1:1..1617;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001409.1 Genbank gene 1 587 . - . ID=gene-C9F09_24210;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=C9F09_24210;partial=true;start_range=.,1 PYKB01001409.1 Protein Homology CDS 1 587 . - 0 ID=cds-TGC79271.1;Parent=gene-C9F09_24210;Dbxref=NCBI_GP:TGC79271.1;Name=TGC79271.1;gbkey=CDS;gene=narI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=C9F09_24210;partial=true;product=respiratory nitrate reductase subunit gamma;protein_id=TGC79271.1;start_range=.,1;transl_table=11 PYKB01001409.1 Genbank gene 587 1297 . - . ID=gene-C9F09_24215;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=C9F09_24215 PYKB01001409.1 Protein Homology CDS 587 1297 . - 0 ID=cds-TGC79272.1;Parent=gene-C9F09_24215;Dbxref=NCBI_GP:TGC79272.1;Name=TGC79272.1;gbkey=CDS;gene=narJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=C9F09_24215;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=TGC79272.1;transl_table=11 PYKB01001409.1 Genbank pseudogene 1294 1539 . - . ID=gene-C9F09_24220;Name=narH;gbkey=Gene;gene=narH;gene_biotype=pseudogene;locus_tag=C9F09_24220;pseudo=true PYKB01001409.1 Protein Homology CDS 1294 1539 . - 0 ID=cds-C9F09_24220;Parent=gene-C9F09_24220;Note=with NarGJI catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455740.1;locus_tag=C9F09_24220;product=nitrate reductase subunit beta;pseudo=true;transl_table=11 ##sequence-region PYKB01001543.1 1 1617 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001543.1 Genbank region 1 1617 . + . ID=PYKB01001543.1:1..1617;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001543.1 Genbank gene 1 1617 . - . ID=gene-C9F09_26885;Name=C9F09_26885;end_range=1617,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26885;partial=true;start_range=.,1 PYKB01001543.1 Protein Homology CDS 1 1617 . - 1 ID=cds-TGC76207.1;Parent=gene-C9F09_26885;Dbxref=NCBI_GP:TGC76207.1;Name=TGC76207.1;end_range=1617,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458507.1;locus_tag=C9F09_26885;partial=true;product=methionine synthase;protein_id=TGC76207.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01000428.1 1 1612 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000428.1 Genbank region 1 1612 . + . ID=PYKB01000428.1:1..1612;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000428.1 Genbank gene 1 630 . + . ID=gene-C9F09_05055;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=C9F09_05055;partial=true;start_range=.,1 PYKB01000428.1 Protein Homology CDS 1 630 . + 0 ID=cds-TGC99083.1;Parent=gene-C9F09_05055;Dbxref=NCBI_GP:TGC99083.1;Name=TGC99083.1;Note=Polymerase that creates the 3' poly(A) tail found in some mRNA's;gbkey=CDS;gene=pcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454800.1;locus_tag=C9F09_05055;partial=true;product=polynucleotide adenylyltransferase;protein_id=TGC99083.1;start_range=.,1;transl_table=11 PYKB01000428.1 Genbank gene 627 1106 . + . ID=gene-C9F09_05060;Name=C9F09_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05060 PYKB01000428.1 Protein Homology CDS 627 1106 . + 0 ID=cds-TGC99084.1;Parent=gene-C9F09_05060;Dbxref=NCBI_GP:TGC99084.1;Name=TGC99084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=C9F09_05060;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=TGC99084.1;transl_table=11 PYKB01000428.1 Genbank gene 1227 1612 . + . ID=gene-C9F09_05065;Name=C9F09_05065;end_range=1612,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_05065;partial=true PYKB01000428.1 Protein Homology CDS 1227 1612 . + 0 ID=cds-TGC99085.1;Parent=gene-C9F09_05065;Dbxref=NCBI_GP:TGC99085.1;Name=TGC99085.1;end_range=1612,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=C9F09_05065;partial=true;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=TGC99085.1;transl_table=11 ##sequence-region PYKB01001070.1 1 1612 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001070.1 Genbank region 1 1612 . + . ID=PYKB01001070.1:1..1612;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001070.1 Genbank gene 1 749 . + . ID=gene-C9F09_17895;Name=C9F09_17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17895;partial=true;start_range=.,1 PYKB01001070.1 Protein Homology CDS 1 749 . + 2 ID=cds-TGC86746.1;Parent=gene-C9F09_17895;Dbxref=NCBI_GP:TGC86746.1;Name=TGC86746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=C9F09_17895;partial=true;product=tricarboxylic transporter;protein_id=TGC86746.1;start_range=.,1;transl_table=11 PYKB01001070.1 Genbank gene 761 1195 . + . ID=gene-C9F09_17900;Name=C9F09_17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17900 PYKB01001070.1 Protein Homology CDS 761 1195 . + 0 ID=cds-TGC86747.1;Parent=gene-C9F09_17900;Dbxref=NCBI_GP:TGC86747.1;Name=TGC86747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=C9F09_17900;product=tripartite tricarboxylate transporter TctB family protein;protein_id=TGC86747.1;transl_table=11 PYKB01001070.1 Genbank pseudogene 1206 1574 . + . ID=gene-C9F09_17905;Name=C9F09_17905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17905;pseudo=true PYKB01001070.1 Protein Homology CDS 1206 1574 . + 0 ID=cds-C9F09_17905;Parent=gene-C9F09_17905;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=C9F09_17905;product=tripartite tricarboxylate transporter TctA;pseudo=true;transl_table=11 ##sequence-region PYKB01001270.1 1 1608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001270.1 Genbank region 1 1608 . + . ID=PYKB01001270.1:1..1608;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001270.1 Genbank gene 1 290 . - . ID=gene-C9F09_21715;Name=C9F09_21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21715;partial=true;start_range=.,1 PYKB01001270.1 Protein Homology CDS 1 290 . - 0 ID=cds-TGC82217.1;Parent=gene-C9F09_21715;Dbxref=NCBI_GP:TGC82217.1;Name=TGC82217.1;Note=response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312633.1;locus_tag=C9F09_21715;partial=true;product=transcriptional regulator UhpA;protein_id=TGC82217.1;start_range=.,1;transl_table=11 PYKB01001270.1 Genbank gene 365 1378 . - . ID=gene-C9F09_21720;Name=C9F09_21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_21720 PYKB01001270.1 Protein Homology CDS 365 1378 . - 0 ID=cds-TGC82218.1;Parent=gene-C9F09_21720;Dbxref=NCBI_GP:TGC82218.1;Name=TGC82218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458146.1;locus_tag=C9F09_21720;product=DUF4432 domain-containing protein;protein_id=TGC82218.1;transl_table=11 PYKB01001270.1 Genbank pseudogene 1390 1608 . - . ID=gene-C9F09_21725;Name=C9F09_21725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_21725;pseudo=true PYKB01001270.1 Protein Homology CDS 1390 1608 . - 0 ID=cds-C9F09_21725;Parent=gene-C9F09_21725;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458145.1;locus_tag=C9F09_21725;product=L-fucose:H+ symporter permease;pseudo=true;transl_table=11 ##sequence-region PYKB01000625.1 1 1604 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000625.1 Genbank region 1 1604 . + . ID=PYKB01000625.1:1..1604;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000625.1 Genbank gene 1 465 . - . ID=gene-C9F09_09275;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=C9F09_09275;partial=true;start_range=.,1 PYKB01000625.1 Protein Homology CDS 1 465 . - 0 ID=cds-TGC94839.1;Parent=gene-C9F09_09275;Dbxref=NCBI_GP:TGC94839.1;Name=TGC94839.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457061.1;locus_tag=C9F09_09275;partial=true;product=dimethylsulfoxide reductase%2C chain B;protein_id=TGC94839.1;start_range=.,1;transl_table=11 PYKB01000625.1 Genbank gene 462 1604 . - . ID=gene-C9F09_09280;Name=C9F09_09280;end_range=1604,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09280;partial=true PYKB01000625.1 Protein Homology CDS 462 1604 . - 0 ID=cds-TGC94840.1;Parent=gene-C9F09_09280;Dbxref=NCBI_GP:TGC94840.1;Name=TGC94840.1;end_range=1604,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461465.1;locus_tag=C9F09_09280;partial=true;product=dimethyl sulfoxide reductase subunit A;protein_id=TGC94840.1;transl_table=11 ##sequence-region PYKB01001494.1 1 1594 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001494.1 Genbank region 1 1594 . + . ID=PYKB01001494.1:1..1594;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001494.1 Genbank gene 119 1162 . + . ID=gene-C9F09_25965;Name=C9F09_25965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25965 PYKB01001494.1 Protein Homology CDS 119 1162 . + 0 ID=cds-TGC77390.1;Parent=gene-C9F09_25965;Dbxref=NCBI_GP:TGC77390.1;Name=TGC77390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135330.1;locus_tag=C9F09_25965;product=cytochrome B6;protein_id=TGC77390.1;transl_table=11 PYKB01001494.1 Genbank pseudogene 1168 1518 . + . ID=gene-C9F09_25970;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=pseudogene;locus_tag=C9F09_25970;pseudo=true PYKB01001494.1 Protein Homology CDS 1168 1518 . + 0 ID=cds-C9F09_25970;Parent=gene-C9F09_25970;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=ccmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=C9F09_25970;product=heme ABC exporter ATP-binding protein CcmA;pseudo=true;transl_table=11 ##sequence-region PYKB01001690.1 1 8250 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001690.1 Genbank region 1 8250 . + . ID=PYKB01001690.1:1..8250;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001690.1 Genbank gene 1 533 . - . ID=gene-C9F09_29455;Name=C9F09_29455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29455;partial=true;start_range=.,1 PYKB01001690.1 Protein Homology CDS 1 533 . - 0 ID=cds-TGC72451.1;Parent=gene-C9F09_29455;Dbxref=NCBI_GP:TGC72451.1;Name=TGC72451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001722504.1;locus_tag=C9F09_29455;partial=true;product=3-oxo-tetronate kinase;protein_id=TGC72451.1;start_range=.,1;transl_table=11 PYKB01001690.1 Genbank gene 467 1534 . - . ID=gene-C9F09_29460;Name=C9F09_29460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29460 PYKB01001690.1 Protein Homology CDS 467 1534 . - 0 ID=cds-TGC72444.1;Parent=gene-C9F09_29460;Dbxref=NCBI_GP:TGC72444.1;Name=TGC72444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000847990.1;locus_tag=C9F09_29460;product=3-hydroxyisobutyrate dehydrogenase;protein_id=TGC72444.1;transl_table=11 PYKB01001690.1 Genbank gene 1731 2495 . + . ID=gene-C9F09_29465;Name=C9F09_29465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29465 PYKB01001690.1 Protein Homology CDS 1731 2495 . + 0 ID=cds-TGC72445.1;Parent=gene-C9F09_29465;Dbxref=NCBI_GP:TGC72445.1;Name=TGC72445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=C9F09_29465;product=DeoR family transcriptional regulator;protein_id=TGC72445.1;transl_table=11 PYKB01001690.1 Genbank pseudogene 2514 2918 . - . ID=gene-C9F09_29470;Name=C9F09_29470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_29470;pseudo=true PYKB01001690.1 Protein Homology CDS 2514 2918 . - 0 ID=cds-C9F09_29470;Parent=gene-C9F09_29470;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457309.1;locus_tag=C9F09_29470;product=transcriptional regulator;pseudo=true;transl_table=11 PYKB01001690.1 Genbank gene 3089 3682 . + . ID=gene-C9F09_29475;Name=C9F09_29475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29475 PYKB01001690.1 Protein Homology CDS 3089 3682 . + 0 ID=cds-TGC72446.1;Parent=gene-C9F09_29475;Dbxref=NCBI_GP:TGC72446.1;Name=TGC72446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457310.1;locus_tag=C9F09_29475;product=UbiX family flavin prenyltransferase;protein_id=TGC72446.1;transl_table=11 PYKB01001690.1 Genbank gene 3682 5109 . + . ID=gene-C9F09_29480;Name=C9F09_29480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29480 PYKB01001690.1 Protein Homology CDS 3682 5109 . + 0 ID=cds-TGC72447.1;Parent=gene-C9F09_29480;Dbxref=NCBI_GP:TGC72447.1;Name=TGC72447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=C9F09_29480;product=UbiD family decarboxylase;protein_id=TGC72447.1;transl_table=11 PYKB01001690.1 Genbank gene 5120 5356 . + . ID=gene-C9F09_29485;Name=C9F09_29485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29485 PYKB01001690.1 Protein Homology CDS 5120 5356 . + 0 ID=cds-TGC72448.1;Parent=gene-C9F09_29485;Dbxref=NCBI_GP:TGC72448.1;Name=TGC72448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457312.1;locus_tag=C9F09_29485;product=hypothetical protein;protein_id=TGC72448.1;transl_table=11 PYKB01001690.1 Genbank gene 5401 6393 . - . ID=gene-C9F09_29490;Name=C9F09_29490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29490 PYKB01001690.1 Protein Homology CDS 5401 6393 . - 0 ID=cds-TGC72449.1;Parent=gene-C9F09_29490;Dbxref=NCBI_GP:TGC72449.1;Name=TGC72449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=C9F09_29490;product=RNA polymerase sigma factor RpoS;protein_id=TGC72449.1;transl_table=11 PYKB01001690.1 Genbank gene 6456 7589 . - . ID=gene-C9F09_29495;Name=C9F09_29495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29495 PYKB01001690.1 Protein Homology CDS 6456 7589 . - 0 ID=cds-TGC72450.1;Parent=gene-C9F09_29495;Dbxref=NCBI_GP:TGC72450.1;Name=TGC72450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=C9F09_29495;product=murein hydrolase activator NlpD;protein_id=TGC72450.1;transl_table=11 PYKB01001690.1 Genbank pseudogene 7765 8199 . - . ID=gene-C9F09_29500;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=pseudogene;locus_tag=C9F09_29500;pseudo=true PYKB01001690.1 Protein Homology CDS 7765 8199 . - 0 ID=cds-C9F09_29500;Parent=gene-C9F09_29500;Note=catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=pcm;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=C9F09_29500;product=protein-L-isoaspartate O-methyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKB01001030.1 1 1593 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001030.1 Genbank region 1 1593 . + . ID=PYKB01001030.1:1..1593;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001030.1 Genbank gene 1 563 . + . ID=gene-C9F09_17225;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=C9F09_17225;partial=true;start_range=.,1 PYKB01001030.1 Protein Homology CDS 1 563 . + 2 ID=cds-TGC87568.1;Parent=gene-C9F09_17225;Dbxref=NCBI_GP:TGC87568.1;Name=TGC87568.1;Note=complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH;gbkey=CDS;gene=tas;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527995.1;locus_tag=C9F09_17225;partial=true;product=NADP(H)-dependent aldo-keto reductase;protein_id=TGC87568.1;start_range=.,1;transl_table=11 PYKB01001030.1 Genbank gene 650 1593 . - . ID=gene-C9F09_17230;Name=C9F09_17230;end_range=1593,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17230;partial=true PYKB01001030.1 Protein Homology CDS 650 1593 . - 2 ID=cds-TGC87569.1;Parent=gene-C9F09_17230;Dbxref=NCBI_GP:TGC87569.1;Name=TGC87569.1;end_range=1593,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457403.1;locus_tag=C9F09_17230;partial=true;product=lysophospholipid transporter LplT;protein_id=TGC87569.1;transl_table=11 ##sequence-region PYKB01001074.1 1 1589 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001074.1 Genbank region 1 1589 . + . ID=PYKB01001074.1:1..1589;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001074.1 Genbank gene 1 774 . + . ID=gene-C9F09_17965;Name=C9F09_17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17965;partial=true;start_range=.,1 PYKB01001074.1 Protein Homology CDS 1 774 . + 0 ID=cds-TGC86543.1;Parent=gene-C9F09_17965;Dbxref=NCBI_GP:TGC86543.1;Name=TGC86543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457111.1;locus_tag=C9F09_17965;partial=true;product=signal peptidase I;protein_id=TGC86543.1;start_range=.,1;transl_table=11 PYKB01001074.1 Genbank pseudogene 793 1104 . - . ID=gene-C9F09_17970;Name=C9F09_17970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17970;pseudo=true PYKB01001074.1 Protein Homology CDS 793 1104 . - 0 ID=cds-C9F09_17970;Parent=gene-C9F09_17970;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003838379.1;locus_tag=C9F09_17970;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01001074.1 Genbank pseudogene 1048 1563 . + . ID=gene-C9F09_17975;Name=C9F09_17975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17975;pseudo=true PYKB01001074.1 Protein Homology CDS 1048 1563 . + 0 ID=cds-C9F09_17975;Parent=gene-C9F09_17975;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461516.1;locus_tag=C9F09_17975;product=ribonuclease III;pseudo=true;transl_table=11 ##sequence-region PYKB01000846.1 1 1589 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000846.1 Genbank region 1 1589 . + . ID=PYKB01000846.1:1..1589;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000846.1 Genbank gene 24 1589 . + . ID=gene-C9F09_13475;Name=C9F09_13475;end_range=1589,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13475;partial=true PYKB01000846.1 Protein Homology CDS 24 1589 . + 0 ID=cds-TGC91308.1;Parent=gene-C9F09_13475;Dbxref=NCBI_GP:TGC91308.1;Name=TGC91308.1;end_range=1589,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=C9F09_13475;partial=true;product=two-component sensor histidine kinase BarA;protein_id=TGC91308.1;transl_table=11 ##sequence-region PYKB01001063.1 1 1588 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001063.1 Genbank region 1 1588 . + . ID=PYKB01001063.1:1..1588;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001063.1 Genbank gene 1 596 . - . ID=gene-C9F09_17795;Name=C9F09_17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17795;partial=true;start_range=.,1 PYKB01001063.1 Protein Homology CDS 1 596 . - 0 ID=cds-TGC86869.1;Parent=gene-C9F09_17795;Dbxref=NCBI_GP:TGC86869.1;Name=TGC86869.1;Note=ethanolamine utilization protein%3B catalyzes the formation of acetyl-CoA from acetaldehyde;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=C9F09_17795;partial=true;product=aldehyde dehydrogenase EutE;protein_id=TGC86869.1;start_range=.,1;transl_table=11 PYKB01001063.1 Genbank gene 608 907 . - . ID=gene-C9F09_17800;Name=C9F09_17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17800 PYKB01001063.1 Protein Homology CDS 608 907 . - 0 ID=cds-TGC86870.1;Parent=gene-C9F09_17800;Dbxref=NCBI_GP:TGC86870.1;Name=TGC86870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461399.3;locus_tag=C9F09_17800;product=ethanolamine utilization protein EutN;protein_id=TGC86870.1;transl_table=11 PYKB01001063.1 Genbank gene 1008 1298 . - . ID=gene-C9F09_17805;Name=C9F09_17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17805 PYKB01001063.1 Protein Homology CDS 1008 1298 . - 0 ID=cds-TGC86871.1;Parent=gene-C9F09_17805;Dbxref=NCBI_GP:TGC86871.1;Name=TGC86871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=C9F09_17805;product=ethanolamine utilization protein EutM;protein_id=TGC86871.1;transl_table=11 PYKB01001063.1 Genbank gene 1339 1588 . - . ID=gene-C9F09_17810;Name=C9F09_17810;end_range=1588,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17810;partial=true PYKB01001063.1 Protein Homology CDS 1339 1588 . - 1 ID=cds-TGC86872.1;Parent=gene-C9F09_17810;Dbxref=NCBI_GP:TGC86872.1;Name=TGC86872.1;end_range=1588,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457000.1;locus_tag=C9F09_17810;partial=true;product=phosphate acetyltransferase;protein_id=TGC86872.1;transl_table=11 ##sequence-region PYKB01001619.1 1 1587 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001619.1 Genbank region 1 1587 . + . ID=PYKB01001619.1:1..1587;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001619.1 Genbank gene 1 332 . + . ID=gene-C9F09_28370;Name=C9F09_28370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28370;partial=true;start_range=.,1 PYKB01001619.1 Protein Homology CDS 1 332 . + 2 ID=cds-TGC74461.1;Parent=gene-C9F09_28370;Dbxref=NCBI_GP:TGC74461.1;Name=TGC74461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461995.3;locus_tag=C9F09_28370;partial=true;product=alpha/beta hydrolase;protein_id=TGC74461.1;start_range=.,1;transl_table=11 PYKB01001619.1 Genbank gene 537 1457 . + . ID=gene-C9F09_28375;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=C9F09_28375 PYKB01001619.1 Protein Homology CDS 537 1457 . + 0 ID=cds-TGC74462.1;Parent=gene-C9F09_28375;Dbxref=NCBI_GP:TGC74462.1;Name=TGC74462.1;gbkey=CDS;gene=speB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457478.1;locus_tag=C9F09_28375;product=agmatinase;protein_id=TGC74462.1;transl_table=11 ##sequence-region PYKB01000312.1 1 1584 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000312.1 Genbank region 1 1584 . + . ID=PYKB01000312.1:1..1584;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000312.1 Genbank gene 1 785 . - . ID=gene-C9F09_03500;Name=C9F09_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03500;partial=true;start_range=.,1 PYKB01000312.1 Protein Homology CDS 1 785 . - 0 ID=cds-TGD01307.1;Parent=gene-C9F09_03500;Dbxref=NCBI_GP:TGD01307.1;Name=TGD01307.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=C9F09_03500;partial=true;product=F0F1 ATP synthase subunit A;protein_id=TGD01307.1;start_range=.,1;transl_table=11 PYKB01000312.1 Genbank gene 794 1174 . - . ID=gene-C9F09_03505;Name=C9F09_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_03505 PYKB01000312.1 Protein Homology CDS 794 1174 . - 0 ID=cds-TGD01308.1;Parent=gene-C9F09_03505;Dbxref=NCBI_GP:TGD01308.1;Name=TGD01308.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=C9F09_03505;product=ATP F0F1 synthase subunit I;protein_id=TGD01308.1;transl_table=11 ##sequence-region PYKB01000499.1 1 1581 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000499.1 Genbank region 1 1581 . + . ID=PYKB01000499.1:1..1581;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000499.1 Genbank gene 1 291 . - . ID=gene-C9F09_06385;Name=C9F09_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06385;partial=true;start_range=.,1 PYKB01000499.1 Protein Homology CDS 1 291 . - 0 ID=cds-TGC97700.1;Parent=gene-C9F09_06385;Dbxref=NCBI_GP:TGC97700.1;Name=TGC97700.1;Note=positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455043.1;locus_tag=C9F09_06385;partial=true;product=BolA family transcriptional regulator;protein_id=TGC97700.1;start_range=.,1;transl_table=11 PYKB01000499.1 Genbank gene 332 517 . - . ID=gene-C9F09_06390;Name=C9F09_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06390 PYKB01000499.1 Protein Homology CDS 332 517 . - 0 ID=cds-TGC97701.1;Parent=gene-C9F09_06390;Dbxref=NCBI_GP:TGC97701.1;Name=TGC97701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537452.1;locus_tag=C9F09_06390;product=hypothetical protein;protein_id=TGC97701.1;transl_table=11 PYKB01000499.1 Genbank gene 595 1173 . + . ID=gene-C9F09_06395;Name=C9F09_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06395 PYKB01000499.1 Protein Homology CDS 595 1173 . + 0 ID=cds-TGC97703.1;Parent=gene-C9F09_06395;Dbxref=NCBI_GP:TGC97703.1;Name=TGC97703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455042.1;locus_tag=C9F09_06395;product=hypothetical protein;protein_id=TGC97703.1;transl_table=11 PYKB01000499.1 Genbank gene 1217 1581 . + . ID=gene-C9F09_06400;Name=C9F09_06400;end_range=1581,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06400;partial=true PYKB01000499.1 Protein Homology CDS 1217 1581 . + 0 ID=cds-TGC97702.1;Parent=gene-C9F09_06400;Dbxref=NCBI_GP:TGC97702.1;Name=TGC97702.1;end_range=1581,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455041.1;locus_tag=C9F09_06400;partial=true;product=hypothetical protein;protein_id=TGC97702.1;transl_table=11 ##sequence-region PYKB01001397.1 1 1571 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001397.1 Genbank region 1 1571 . + . ID=PYKB01001397.1:1..1571;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001397.1 Genbank gene 1 669 . + . ID=gene-C9F09_23990;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=C9F09_23990;partial=true;start_range=.,1 PYKB01001397.1 Protein Homology CDS 1 669 . + 0 ID=cds-TGC79547.1;Parent=gene-C9F09_23990;Dbxref=NCBI_GP:TGC79547.1;Name=TGC79547.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;gbkey=CDS;gene=fruK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456763.1;locus_tag=C9F09_23990;partial=true;product=1-phosphofructokinase;protein_id=TGC79547.1;start_range=.,1;transl_table=11 PYKB01001397.1 Genbank pseudogene 686 1543 . + . ID=gene-C9F09_23995;Name=C9F09_23995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_23995;pseudo=true PYKB01001397.1 Protein Homology CDS 686 1543 . + 0 ID=cds-C9F09_23995;Parent=gene-C9F09_23995;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456762.1;locus_tag=C9F09_23995;product=PTS fructose transporter subunit EIIBC;pseudo=true;transl_table=11 ##sequence-region PYKB01001181.1 1 1568 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001181.1 Genbank region 1 1568 . + . ID=PYKB01001181.1:1..1568;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001181.1 Genbank pseudogene 26 946 . - . ID=gene-C9F09_20060;Name=C9F09_20060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_20060;pseudo=true PYKB01001181.1 Protein Homology CDS 26 946 . - 0 ID=cds-C9F09_20060;Parent=gene-C9F09_20060;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=C9F09_20060;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH;pseudo=true;transl_table=11 PYKB01001181.1 Genbank gene 1307 1510 . - . ID=gene-C9F09_20065;Name=C9F09_20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_20065 PYKB01001181.1 Protein Homology CDS 1307 1510 . - 0 ID=cds-TGC83973.1;Parent=gene-C9F09_20065;Dbxref=NCBI_GP:TGC83973.1;Name=TGC83973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478244.1;locus_tag=C9F09_20065;product=hypothetical protein;protein_id=TGC83973.1;transl_table=11 ##sequence-region PYKB01000541.1 1 1565 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000541.1 Genbank region 1 1565 . + . ID=PYKB01000541.1:1..1565;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000541.1 Genbank gene 1 361 . - . ID=gene-C9F09_07370;Name=C9F09_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07370;partial=true;start_range=.,1 PYKB01000541.1 Protein Homology CDS 1 361 . - 0 ID=cds-TGC96731.1;Parent=gene-C9F09_07370;Dbxref=NCBI_GP:TGC96731.1;Name=TGC96731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457640.1;locus_tag=C9F09_07370;partial=true;product=hypothetical protein;protein_id=TGC96731.1;start_range=.,1;transl_table=11 PYKB01000541.1 Genbank gene 388 1302 . - . ID=gene-C9F09_07375;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=C9F09_07375 PYKB01000541.1 Protein Homology CDS 388 1302 . - 0 ID=cds-TGC96732.1;Parent=gene-C9F09_07375;Dbxref=NCBI_GP:TGC96732.1;Name=TGC96732.1;gbkey=CDS;gene=pfkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457639.1;locus_tag=C9F09_07375;product=1-phosphofructokinase;protein_id=TGC96732.1;transl_table=11 PYKB01000541.1 Genbank gene 1313 1565 . - . ID=gene-C9F09_07380;Name=kbaY;end_range=1565,.;gbkey=Gene;gene=kbaY;gene_biotype=protein_coding;gene_synonym=agaY;locus_tag=C9F09_07380;partial=true PYKB01000541.1 Protein Homology CDS 1313 1565 . - 1 ID=cds-TGC96733.1;Parent=gene-C9F09_07380;Dbxref=NCBI_GP:TGC96733.1;Name=TGC96733.1;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway;end_range=1565,.;gbkey=CDS;gene=kbaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457638.1;locus_tag=C9F09_07380;partial=true;product=tagatose-bisphosphate aldolase;protein_id=TGC96733.1;transl_table=11 ##sequence-region PYKB01000876.1 1 8221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000876.1 Genbank region 1 8221 . + . ID=PYKB01000876.1:1..8221;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000876.1 Genbank gene 1 1172 . - . ID=gene-C9F09_14260;Name=C9F09_14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14260;partial=true;start_range=.,1 PYKB01000876.1 Protein Homology CDS 1 1172 . - 0 ID=cds-TGC90672.1;Parent=gene-C9F09_14260;Dbxref=NCBI_GP:TGC90672.1;Name=TGC90672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457558.1;locus_tag=C9F09_14260;partial=true;product=anion permease;protein_id=TGC90672.1;start_range=.,1;transl_table=11 PYKB01000876.1 Genbank gene 1369 2196 . - . ID=gene-C9F09_14265;Name=C9F09_14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14265 PYKB01000876.1 Protein Homology CDS 1369 2196 . - 0 ID=cds-TGC90673.1;Parent=gene-C9F09_14265;Dbxref=NCBI_GP:TGC90673.1;Name=TGC90673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=C9F09_14265;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=TGC90673.1;transl_table=11 PYKB01000876.1 Genbank gene 2302 3465 . - . ID=gene-C9F09_14270;Name=C9F09_14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14270 PYKB01000876.1 Protein Homology CDS 2302 3465 . - 0 ID=cds-TGC90674.1;Parent=gene-C9F09_14270;Dbxref=NCBI_GP:TGC90674.1;Name=TGC90674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=C9F09_14270;product=alcohol dehydrogenase;protein_id=TGC90674.1;transl_table=11 PYKB01000876.1 Genbank gene 3640 4557 . + . ID=gene-C9F09_14275;Name=C9F09_14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14275 PYKB01000876.1 Protein Homology CDS 3640 4557 . + 0 ID=cds-TGC90675.1;Parent=gene-C9F09_14275;Dbxref=NCBI_GP:TGC90675.1;Name=TGC90675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462078.1;locus_tag=C9F09_14275;product=AraC family transcriptional regulator;protein_id=TGC90675.1;transl_table=11 PYKB01000876.1 Genbank gene 4621 5280 . - . ID=gene-C9F09_14280;Name=C9F09_14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14280 PYKB01000876.1 Protein Homology CDS 4621 5280 . - 0 ID=cds-TGC90676.1;Parent=gene-C9F09_14280;Dbxref=NCBI_GP:TGC90676.1;Name=TGC90676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457555.1;locus_tag=C9F09_14280;product=DedA family protein;protein_id=TGC90676.1;transl_table=11 PYKB01000876.1 Genbank gene 5420 6607 . - . ID=gene-C9F09_14285;Name=C9F09_14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14285 PYKB01000876.1 Protein Homology CDS 5420 6607 . - 0 ID=cds-TGC90677.1;Parent=gene-C9F09_14285;Dbxref=NCBI_GP:TGC90677.1;Name=TGC90677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457554.1;locus_tag=C9F09_14285;product=cystathionine beta-lyase;protein_id=TGC90677.1;transl_table=11 PYKB01000876.1 Genbank gene 6717 6866 . + . ID=gene-C9F09_14290;Name=C9F09_14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14290 PYKB01000876.1 Protein Homology CDS 6717 6866 . + 0 ID=cds-TGC90678.1;Parent=gene-C9F09_14290;Dbxref=NCBI_GP:TGC90678.1;Name=TGC90678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462075.1;locus_tag=C9F09_14290;product=hypothetical protein;protein_id=TGC90678.1;transl_table=11 PYKB01000876.1 Genbank gene 6859 7593 . + . ID=gene-C9F09_14295;Name=C9F09_14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14295 PYKB01000876.1 Protein Homology CDS 6859 7593 . + 0 ID=cds-TGC90679.1;Parent=gene-C9F09_14295;Dbxref=NCBI_GP:TGC90679.1;Name=TGC90679.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457552.1;locus_tag=C9F09_14295;product=biopolymer transporter ExbB;protein_id=TGC90679.1;transl_table=11 PYKB01000876.1 Genbank gene 7600 8025 . + . ID=gene-C9F09_14300;Name=C9F09_14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14300 PYKB01000876.1 Protein Homology CDS 7600 8025 . + 0 ID=cds-TGC90680.1;Parent=gene-C9F09_14300;Dbxref=NCBI_GP:TGC90680.1;Name=TGC90680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457551.1;locus_tag=C9F09_14300;product=TonB system transport protein ExbD;protein_id=TGC90680.1;transl_table=11 ##sequence-region PYKB01001728.1 1 1564 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001728.1 Genbank region 1 1564 . + . ID=PYKB01001728.1:1..1564;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001728.1 Genbank pseudogene 1 541 . - . ID=gene-C9F09_30290;Name=C9F09_30290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_30290;pseudo=true PYKB01001728.1 Protein Homology CDS 1 541 . - 0 ID=cds-C9F09_30290;Parent=gene-C9F09_30290;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458116.1;locus_tag=C9F09_30290;product=TMAO reductase system periplasmic protein TorT;pseudo=true;transl_table=11 PYKB01001728.1 Genbank pseudogene 621 1481 . + . ID=gene-C9F09_30295;Name=C9F09_30295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_30295;pseudo=true PYKB01001728.1 Protein Homology CDS 621 1481 . + 0 ID=cds-C9F09_30295;Parent=gene-C9F09_30295;Note=Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458115.1;locus_tag=C9F09_30295;product=TMAO reductase two-component system sensor histidine kinase TorS;pseudo=true;transl_table=11 ##sequence-region PYKB01000533.1 1 1562 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000533.1 Genbank region 1 1562 . + . ID=PYKB01000533.1:1..1562;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000533.1 Genbank gene 84 1049 . + . ID=gene-C9F09_07255;Name=C9F09_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07255 PYKB01000533.1 Protein Homology CDS 84 1049 . + 0 ID=cds-TGC96861.1;Parent=gene-C9F09_07255;Dbxref=NCBI_GP:TGC96861.1;Name=TGC96861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001671211.1;locus_tag=C9F09_07255;product=DNA polymerase IV;protein_id=TGC96861.1;transl_table=11 PYKB01000533.1 Genbank pseudogene 1268 1501 . + . ID=gene-C9F09_07260;Name=C9F09_07260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07260;pseudo=true PYKB01000533.1 Protein Homology CDS 1268 1501 . + 0 ID=cds-C9F09_07260;Parent=gene-C9F09_07260;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454926.1;locus_tag=C9F09_07260;product=RNA ligase RtcB family protein;pseudo=true;transl_table=11 ##sequence-region PYKB01000610.1 1 1560 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000610.1 Genbank region 1 1560 . + . ID=PYKB01000610.1:1..1560;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000610.1 Genbank gene 1 189 . - . ID=gene-C9F09_09025;Name=C9F09_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09025;partial=true;start_range=.,1 PYKB01000610.1 Protein Homology CDS 1 189 . - 0 ID=cds-TGC95127.1;Parent=gene-C9F09_09025;Dbxref=NCBI_GP:TGC95127.1;Name=TGC95127.1;Note=sigma 54-dependent%3B regulates genes involved in forming a 2'%2C3'-cyclic phosphodiester on RNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462424.1;locus_tag=C9F09_09025;partial=true;product=transcriptional regulator;protein_id=TGC95127.1;start_range=.,1;transl_table=11 PYKB01000610.1 Genbank gene 379 1560 . + . ID=gene-C9F09_09030;Name=C9F09_09030;end_range=1560,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09030;partial=true PYKB01000610.1 Protein Homology CDS 379 1560 . + 0 ID=cds-TGC95128.1;Parent=gene-C9F09_09030;Dbxref=NCBI_GP:TGC95128.1;Name=TGC95128.1;end_range=1560,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=C9F09_09030;partial=true;product=TROVE domain-containing protein;protein_id=TGC95128.1;transl_table=11 ##sequence-region PYKB01001623.1 1 1559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001623.1 Genbank region 1 1559 . + . ID=PYKB01001623.1:1..1559;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001623.1 Genbank gene 1 354 . - . ID=gene-C9F09_28420;Name=C9F09_28420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28420;partial=true;start_range=.,1 PYKB01001623.1 Protein Homology CDS 1 354 . - 0 ID=cds-TGC74281.1;Parent=gene-C9F09_28420;Dbxref=NCBI_GP:TGC74281.1;Name=TGC74281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459348.1;locus_tag=C9F09_28420;partial=true;product=ATPase;protein_id=TGC74281.1;start_range=.,1;transl_table=11 PYKB01001623.1 Genbank gene 631 1559 . + . ID=gene-C9F09_28425;Name=C9F09_28425;end_range=1559,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28425;partial=true PYKB01001623.1 Protein Homology CDS 631 1559 . + 0 ID=cds-TGC74282.1;Parent=gene-C9F09_28425;Dbxref=NCBI_GP:TGC74282.1;Name=TGC74282.1;end_range=1559,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=C9F09_28425;partial=true;product=efflux transporter periplasmic adaptor subunit;protein_id=TGC74282.1;transl_table=11 ##sequence-region PYKB01000734.1 1 1554 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000734.1 Genbank region 1 1554 . + . ID=PYKB01000734.1:1..1554;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000734.1 Genbank gene 1 183 . - . ID=gene-C9F09_11270;Name=C9F09_11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11270;partial=true;start_range=.,1 PYKB01000734.1 Protein Homology CDS 1 183 . - 0 ID=cds-TGC93214.1;Parent=gene-C9F09_11270;Dbxref=NCBI_GP:TGC93214.1;Name=TGC93214.1;Note=enterobacterial common antigen polymerase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457819.1;locus_tag=C9F09_11270;partial=true;product=O-antigen assembly polymerase;protein_id=TGC93214.1;start_range=.,1;transl_table=11 PYKB01000734.1 Genbank gene 180 1259 . - . ID=gene-C9F09_11275;Name=C9F09_11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11275 PYKB01000734.1 Protein Homology CDS 180 1259 . - 0 ID=cds-TGC93215.1;Parent=gene-C9F09_11275;Dbxref=NCBI_GP:TGC93215.1;Name=TGC93215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=C9F09_11275;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=TGC93215.1;transl_table=11 PYKB01000734.1 Genbank gene 1256 1554 . - . ID=gene-C9F09_11280;Name=C9F09_11280;end_range=1554,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11280;partial=true PYKB01000734.1 Protein Homology CDS 1256 1554 . - 2 ID=cds-TGC93216.1;Parent=gene-C9F09_11280;Dbxref=NCBI_GP:TGC93216.1;Name=TGC93216.1;Note=involved in the movement of lipid III across the membrane;end_range=1554,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457821.1;locus_tag=C9F09_11280;partial=true;product=lipid III flippase WzxE;protein_id=TGC93216.1;transl_table=11 ##sequence-region PYKB01001601.1 1 1553 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001601.1 Genbank region 1 1553 . + . ID=PYKB01001601.1:1..1553;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001601.1 Genbank gene 1 441 . + . ID=gene-C9F09_28105;Name=C9F09_28105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28105;partial=true;start_range=.,1 PYKB01001601.1 Protein Homology CDS 1 441 . + 0 ID=cds-TGC74802.1;Parent=gene-C9F09_28105;Dbxref=NCBI_GP:TGC74802.1;Name=TGC74802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458830.1;locus_tag=C9F09_28105;partial=true;product=hypothetical protein;protein_id=TGC74802.1;start_range=.,1;transl_table=11 PYKB01001601.1 Genbank gene 491 1417 . - . ID=gene-C9F09_28110;Name=C9F09_28110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28110 PYKB01001601.1 Protein Homology CDS 491 1417 . - 0 ID=cds-TGC74803.1;Parent=gene-C9F09_28110;Dbxref=NCBI_GP:TGC74803.1;Name=TGC74803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=C9F09_28110;product=EamA family transporter;protein_id=TGC74803.1;transl_table=11 ##sequence-region PYKB01001667.1 1 1552 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001667.1 Genbank region 1 1552 . + . ID=PYKB01001667.1:1..1552;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001667.1 Genbank gene 1 1101 . + . ID=gene-C9F09_29010;Name=C9F09_29010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29010;partial=true;start_range=.,1 PYKB01001667.1 Protein Homology CDS 1 1101 . + 0 ID=cds-TGC73178.1;Parent=gene-C9F09_29010;Dbxref=NCBI_GP:TGC73178.1;Name=TGC73178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=C9F09_29010;partial=true;product=hypothetical protein;protein_id=TGC73178.1;start_range=.,1;transl_table=11 PYKB01001667.1 Genbank gene 1187 1552 . + . ID=gene-C9F09_29015;Name=C9F09_29015;end_range=1552,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_29015;partial=true PYKB01001667.1 Protein Homology CDS 1187 1552 . + 0 ID=cds-TGC73179.1;Parent=gene-C9F09_29015;Dbxref=NCBI_GP:TGC73179.1;Name=TGC73179.1;end_range=1552,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=C9F09_29015;partial=true;product=transcriptional regulator;protein_id=TGC73179.1;transl_table=11 ##sequence-region PYKB01000240.1 1 1552 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000240.1 Genbank region 1 1552 . + . ID=PYKB01000240.1:1..1552;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000240.1 Genbank gene 1 1273 . + . ID=gene-C9F09_02590;Name=C9F09_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02590;partial=true;start_range=.,1 PYKB01000240.1 Protein Homology CDS 1 1273 . + 1 ID=cds-TGD02733.1;Parent=gene-C9F09_02590;Dbxref=NCBI_GP:TGD02733.1;Name=TGD02733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=C9F09_02590;partial=true;product=cytochrome ubiquinol oxidase subunit I;protein_id=TGD02733.1;start_range=.,1;transl_table=11 PYKB01000240.1 Genbank gene 1270 1552 . + . ID=gene-C9F09_02595;Name=C9F09_02595;end_range=1552,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02595;partial=true PYKB01000240.1 Protein Homology CDS 1270 1552 . + 0 ID=cds-TGD02734.1;Parent=gene-C9F09_02595;Dbxref=NCBI_GP:TGD02734.1;Name=TGD02734.1;end_range=1552,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454956.1;locus_tag=C9F09_02595;partial=true;product=ubiquinol oxidase subunit II;protein_id=TGD02734.1;transl_table=11 ##sequence-region PYKB01000013.1 1 1551 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000013.1 Genbank region 1 1551 . + . ID=PYKB01000013.1:1..1551;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000013.1 Genbank gene 131 352 . - . ID=gene-C9F09_00145;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=C9F09_00145 PYKB01000013.1 Protein Homology CDS 131 352 . - 0 ID=cds-TGD07057.1;Parent=gene-C9F09_00145;Dbxref=NCBI_GP:TGD07057.1;Name=TGD07057.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455433.1;locus_tag=C9F09_00145;product=cold shock domain protein CspD;protein_id=TGD07057.1;transl_table=11 PYKB01000013.1 Genbank gene 676 996 . + . ID=gene-C9F09_00150;Name=C9F09_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00150 PYKB01000013.1 Protein Homology CDS 676 996 . + 0 ID=cds-TGD07058.1;Parent=gene-C9F09_00150;Dbxref=NCBI_GP:TGD07058.1;Name=TGD07058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=C9F09_00150;product=ATP-dependent Clp protease adaptor ClpS;protein_id=TGD07058.1;transl_table=11 PYKB01000013.1 Genbank gene 1027 1551 . + . ID=gene-C9F09_00155;Name=clpA;end_range=1551,.;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=C9F09_00155;partial=true PYKB01000013.1 Protein Homology CDS 1027 1551 . + 0 ID=cds-TGD07059.1;Parent=gene-C9F09_00155;Dbxref=NCBI_GP:TGD07059.1;Name=TGD07059.1;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;end_range=1551,.;gbkey=CDS;gene=clpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=C9F09_00155;partial=true;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=TGD07059.1;transl_table=11 ##sequence-region PYKB01001430.1 1 1551 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001430.1 Genbank region 1 1551 . + . ID=PYKB01001430.1:1..1551;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001430.1 Genbank gene 1 889 . + . ID=gene-C9F09_24605;Name=C9F09_24605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24605;partial=true;start_range=.,1 PYKB01001430.1 Protein Homology CDS 1 889 . + 1 ID=cds-TGC78777.1;Parent=gene-C9F09_24605;Dbxref=NCBI_GP:TGC78777.1;Name=TGC78777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=C9F09_24605;partial=true;product=fimbrial assembly protein;protein_id=TGC78777.1;start_range=.,1;transl_table=11 PYKB01001430.1 Genbank gene 947 1551 . - . ID=gene-C9F09_24610;Name=C9F09_24610;end_range=1551,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24610;partial=true PYKB01001430.1 Protein Homology CDS 947 1551 . - 2 ID=cds-TGC78778.1;Parent=gene-C9F09_24610;Dbxref=NCBI_GP:TGC78778.1;Name=TGC78778.1;end_range=1551,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458997.1;locus_tag=C9F09_24610;partial=true;product=cell envelope integrity protein CreD;protein_id=TGC78778.1;transl_table=11 ##sequence-region PYKB01000916.1 1 8169 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000916.1 Genbank region 1 8169 . + . ID=PYKB01000916.1:1..8169;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000916.1 Genbank gene 1 422 . + . ID=gene-C9F09_15045;Name=C9F09_15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15045;partial=true;start_range=.,1 PYKB01000916.1 Protein Homology CDS 1 422 . + 2 ID=cds-TGC89864.1;Parent=gene-C9F09_15045;Dbxref=NCBI_GP:TGC89864.1;Name=TGC89864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=C9F09_15045;partial=true;product=[citrate (pro-3S)-lyase] ligase;protein_id=TGC89864.1;start_range=.,1;transl_table=11 PYKB01000916.1 Genbank gene 452 745 . + . ID=gene-C9F09_15050;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=C9F09_15050 PYKB01000916.1 Protein Homology CDS 452 745 . + 0 ID=cds-TGC89865.1;Parent=gene-C9F09_15050;Dbxref=NCBI_GP:TGC89865.1;Name=TGC89865.1;gbkey=CDS;gene=citD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454670.1;locus_tag=C9F09_15050;product=citrate lyase ACP;protein_id=TGC89865.1;transl_table=11 PYKB01000916.1 Genbank gene 742 1611 . + . ID=gene-C9F09_15055;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=C9F09_15055 PYKB01000916.1 Protein Homology CDS 742 1611 . + 0 ID=cds-TGC89866.1;Parent=gene-C9F09_15055;Dbxref=NCBI_GP:TGC89866.1;Name=TGC89866.1;gbkey=CDS;gene=citE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=C9F09_15055;product=citrate (pro-3S)-lyase subunit beta;protein_id=TGC89866.1;transl_table=11 PYKB01000916.1 Genbank gene 1622 3142 . + . ID=gene-C9F09_15060;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=C9F09_15060 PYKB01000916.1 Protein Homology CDS 1622 3142 . + 0 ID=cds-TGC89867.1;Parent=gene-C9F09_15060;Dbxref=NCBI_GP:TGC89867.1;Name=TGC89867.1;gbkey=CDS;gene=citF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=C9F09_15060;product=citrate lyase subunit alpha;protein_id=TGC89867.1;transl_table=11 PYKB01000916.1 Genbank gene 3142 3693 . + . ID=gene-C9F09_15065;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=C9F09_15065 PYKB01000916.1 Protein Homology CDS 3142 3693 . + 0 ID=cds-TGC89868.1;Parent=gene-C9F09_15065;Dbxref=NCBI_GP:TGC89868.1;Name=TGC89868.1;gbkey=CDS;gene=citX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454673.1;locus_tag=C9F09_15065;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=TGC89868.1;transl_table=11 PYKB01000916.1 Genbank gene 3671 4579 . + . ID=gene-C9F09_15070;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=C9F09_15070 PYKB01000916.1 Protein Homology CDS 3671 4579 . + 0 ID=cds-TGC89869.1;Parent=gene-C9F09_15070;Dbxref=NCBI_GP:TGC89869.1;Name=TGC89869.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=C9F09_15070;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=TGC89869.1;transl_table=11 PYKB01000916.1 Genbank gene 4759 5580 . + . ID=gene-C9F09_15075;Name=C9F09_15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15075 PYKB01000916.1 Protein Homology CDS 4759 5580 . + 0 ID=cds-TGC89870.1;Parent=gene-C9F09_15075;Dbxref=NCBI_GP:TGC89870.1;Name=TGC89870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454675.1;locus_tag=C9F09_15075;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=TGC89870.1;transl_table=11 PYKB01000916.1 Genbank pseudogene 5738 5939 . + . ID=gene-C9F09_15080;Name=C9F09_15080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_15080;pseudo=true PYKB01000916.1 Protein Homology CDS 5738 5939 . + 0 ID=cds-C9F09_15080;Parent=gene-C9F09_15080;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446529.1;locus_tag=C9F09_15080;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000916.1 Genbank gene 6444 7592 . + . ID=gene-C9F09_15085;Name=C9F09_15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15085 PYKB01000916.1 Protein Homology CDS 6444 7592 . + 0 ID=cds-TGC89871.1;Parent=gene-C9F09_15085;Dbxref=NCBI_GP:TGC89871.1;Name=TGC89871.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=C9F09_15085;product=carbamoyl-phosphate synthase small subunit;protein_id=TGC89871.1;transl_table=11 PYKB01000916.1 Genbank gene 7611 8169 . + . ID=gene-C9F09_15090;Name=C9F09_15090;end_range=8169,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_15090;partial=true PYKB01000916.1 Protein Homology CDS 7611 8169 . + 0 ID=cds-TGC89872.1;Parent=gene-C9F09_15090;Dbxref=NCBI_GP:TGC89872.1;Name=TGC89872.1;end_range=8169,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454677.1;locus_tag=C9F09_15090;partial=true;product=carbamoyl-phosphate synthase large subunit;protein_id=TGC89872.1;transl_table=11 ##sequence-region PYKB01001167.1 1 1551 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001167.1 Genbank region 1 1551 . + . ID=PYKB01001167.1:1..1551;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001167.1 Genbank pseudogene 39 383 . + . ID=gene-C9F09_19745;Name=C9F09_19745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_19745;pseudo=true PYKB01001167.1 Protein Homology CDS 39 383 . + 0 ID=cds-C9F09_19745;Parent=gene-C9F09_19745;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=C9F09_19745;product=dihydroxy-acid dehydratase;pseudo=true;transl_table=11 PYKB01001167.1 Genbank gene 386 1551 . + . ID=gene-C9F09_19750;Name=ilvA;end_range=1551,.;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=C9F09_19750;partial=true PYKB01001167.1 Protein Homology CDS 386 1551 . + 0 ID=cds-TGC84353.1;Parent=gene-C9F09_19750;Dbxref=NCBI_GP:TGC84353.1;Name=TGC84353.1;end_range=1551,.;gbkey=CDS;gene=ilvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457843.1;locus_tag=C9F09_19750;partial=true;product=threonine ammonia-lyase%2C biosynthetic;protein_id=TGC84353.1;transl_table=11 ##sequence-region PYKB01000548.1 1 1546 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000548.1 Genbank region 1 1546 . + . ID=PYKB01000548.1:1..1546;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000548.1 Genbank gene 1 306 . + . ID=gene-C9F09_07535;Name=C9F09_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07535;partial=true;start_range=.,1 PYKB01000548.1 Protein Homology CDS 1 306 . + 0 ID=cds-TGC96541.1;Parent=gene-C9F09_07535;Dbxref=NCBI_GP:TGC96541.1;Name=TGC96541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000958548.1;locus_tag=C9F09_07535;partial=true;product=E3 ubiquitin-protein ligase SspH2;protein_id=TGC96541.1;start_range=.,1;transl_table=11 PYKB01000548.1 Genbank pseudogene 340 438 . + . ID=gene-C9F09_07540;Name=C9F09_07540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07540;pseudo=true PYKB01000548.1 Protein Homology CDS 340 438 . + 0 ID=cds-C9F09_07540;Parent=gene-C9F09_07540;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456556.1;locus_tag=C9F09_07540;product=DNA polymerase V;pseudo=true;transl_table=11 PYKB01000548.1 Genbank pseudogene 448 976 . + . ID=gene-C9F09_07545;Name=C9F09_07545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07545;pseudo=true PYKB01000548.1 Protein Homology CDS 448 976 . + 0 ID=cds-C9F09_07545;Parent=gene-C9F09_07545;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=C9F09_07545;product=IS256 family transposase;pseudo=true;transl_table=11 PYKB01000548.1 Genbank gene 1122 1262 . - . ID=gene-C9F09_07550;Name=C9F09_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07550 PYKB01000548.1 Protein Homology CDS 1122 1262 . - 0 ID=cds-TGC96542.1;Parent=gene-C9F09_07550;Dbxref=NCBI_GP:TGC96542.1;Name=TGC96542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576018.1;locus_tag=C9F09_07550;product=hypothetical protein;protein_id=TGC96542.1;transl_table=11 ##sequence-region PYKB01001069.1 1 1538 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001069.1 Genbank region 1 1538 . + . ID=PYKB01001069.1:1..1538;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001069.1 Genbank gene 1 480 . - . ID=gene-C9F09_17885;Name=C9F09_17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17885;partial=true;start_range=.,1 PYKB01001069.1 Protein Homology CDS 1 480 . - 0 ID=cds-TGC86750.1;Parent=gene-C9F09_17885;Dbxref=NCBI_GP:TGC86750.1;Name=TGC86750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457352.1;locus_tag=C9F09_17885;partial=true;product=GTP diphosphokinase;protein_id=TGC86750.1;start_range=.,1;transl_table=11 PYKB01001069.1 Genbank pseudogene 532 1458 . - . ID=gene-C9F09_17890;Name=C9F09_17890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_17890;pseudo=true PYKB01001069.1 Protein Homology CDS 532 1458 . - 0 ID=cds-C9F09_17890;Parent=gene-C9F09_17890;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=C9F09_17890;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;pseudo=true;transl_table=11 ##sequence-region PYKB01001513.1 1 1538 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001513.1 Genbank region 1 1538 . + . ID=PYKB01001513.1:1..1538;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001513.1 Genbank pseudogene 49 774 . - . ID=gene-C9F09_26260;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=pseudogene;gene_synonym=yahU;locus_tag=C9F09_26260;pseudo=true PYKB01001513.1 Protein Homology CDS 49 774 . - 0 ID=cds-C9F09_26260;Parent=gene-C9F09_26260;Note=catalyzes the formation of propionyl-CoA using propionate as a substrate%3B PrpE from Ralstonia solanacearum can produce acetyl-%2C propionyl-%2C butyryl- and acrylyl-coenzyme A%2C and Salmonella enterica produces propionyl- and butyryl-coenzyme A%3B not expressed in Escherichia coli when grown on propionate/minimal media%3B ATP-dependent%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=prpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=C9F09_26260;product=propionyl-CoA synthetase;pseudo=true;transl_table=11 PYKB01001513.1 Genbank gene 815 1538 . - . ID=gene-C9F09_26265;Name=C9F09_26265;end_range=1538,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_26265;partial=true PYKB01001513.1 Protein Homology CDS 815 1538 . - 1 ID=cds-TGC76872.1;Parent=gene-C9F09_26265;Dbxref=NCBI_GP:TGC76872.1;Name=TGC76872.1;end_range=1538,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=C9F09_26265;partial=true;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=TGC76872.1;transl_table=11 ##sequence-region PYKB01000255.1 1 1533 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000255.1 Genbank region 1 1533 . + . ID=PYKB01000255.1:1..1533;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000255.1 Genbank gene 1 511 . - . ID=gene-C9F09_02775;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=C9F09_02775;partial=true;start_range=.,1 PYKB01000255.1 Protein Homology CDS 1 511 . - 0 ID=cds-TGD02443.1;Parent=gene-C9F09_02775;Dbxref=NCBI_GP:TGD02443.1;Name=TGD02443.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=C9F09_02775;partial=true;product=virulence membrane protein PagC;protein_id=TGD02443.1;start_range=.,1;transl_table=11 PYKB01000255.1 Genbank gene 1077 1268 . - . ID=gene-C9F09_02780;Name=C9F09_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02780 PYKB01000255.1 Protein Homology CDS 1077 1268 . - 0 ID=cds-TGD02444.1;Parent=gene-C9F09_02780;Dbxref=NCBI_GP:TGD02444.1;Name=TGD02444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529092.1;locus_tag=C9F09_02780;product=hypothetical protein;protein_id=TGD02444.1;transl_table=11 PYKB01000255.1 Genbank gene 1317 1533 . + . ID=gene-C9F09_02785;Name=C9F09_02785;end_range=1533,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02785;partial=true PYKB01000255.1 Protein Homology CDS 1317 1533 . + 0 ID=cds-TGD02445.1;Parent=gene-C9F09_02785;Dbxref=NCBI_GP:TGD02445.1;Name=TGD02445.1;end_range=1533,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456271.1;locus_tag=C9F09_02785;partial=true;product=virulence factor;protein_id=TGD02445.1;transl_table=11 ##sequence-region PYKB01000634.1 1 1532 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000634.1 Genbank region 1 1532 . + . ID=PYKB01000634.1:1..1532;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000634.1 Genbank gene 1 143 . + . ID=gene-C9F09_09450;Name=C9F09_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_09450;partial=true;start_range=.,1 PYKB01000634.1 Protein Homology CDS 1 143 . + 2 ID=cds-TGC94658.1;Parent=gene-C9F09_09450;Dbxref=NCBI_GP:TGC94658.1;Name=TGC94658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310436.1;locus_tag=C9F09_09450;partial=true;product=phosphoenolpyruvate synthase;protein_id=TGC94658.1;start_range=.,1;transl_table=11 PYKB01000634.1 Genbank pseudogene 185 1532 . - . ID=gene-C9F09_09455;Name=C9F09_09455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_09455;pseudo=true PYKB01000634.1 Protein Homology CDS 185 1532 . - 1 ID=cds-C9F09_09455;Parent=gene-C9F09_09455;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=C9F09_09455;product=cyclohexanecarboxylate-CoA ligase;pseudo=true;transl_table=11 ##sequence-region PYKB01001657.1 1 1532 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001657.1 Genbank region 1 1532 . + . ID=PYKB01001657.1:1..1532;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001657.1 Genbank gene 1 472 . + . ID=gene-C9F09_28890;Name=C9F09_28890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28890;partial=true;start_range=.,1 PYKB01001657.1 Protein Homology CDS 1 472 . + 1 ID=cds-TGC73400.1;Parent=gene-C9F09_28890;Dbxref=NCBI_GP:TGC73400.1;Name=TGC73400.1;Note=part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454807.1;locus_tag=C9F09_28890;partial=true;product=iron-hydroxamate transporter ATP-binding subunit;protein_id=TGC73400.1;start_range=.,1;transl_table=11 PYKB01001657.1 Genbank gene 472 1362 . + . ID=gene-C9F09_28895;Name=C9F09_28895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_28895 PYKB01001657.1 Protein Homology CDS 472 1362 . + 0 ID=cds-TGC73401.1;Parent=gene-C9F09_28895;Dbxref=NCBI_GP:TGC73401.1;Name=TGC73401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=C9F09_28895;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=TGC73401.1;transl_table=11 ##sequence-region PYKB01000011.1 1 1528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000011.1 Genbank region 1 1528 . + . ID=PYKB01000011.1:1..1528;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000011.1 Genbank gene 57 569 . - . ID=gene-C9F09_00105;Name=C9F09_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00105 PYKB01000011.1 Protein Homology CDS 57 569 . - 0 ID=cds-TGD07240.1;Parent=gene-C9F09_00105;Dbxref=NCBI_GP:TGD07240.1;Name=TGD07240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457420.1;locus_tag=C9F09_00105;product=CaiF/GrlA family transcriptional regulator;protein_id=TGD07240.1;transl_table=11 PYKB01000011.1 Genbank gene 713 1528 . - . ID=gene-C9F09_00110;Name=C9F09_00110;end_range=1528,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_00110;partial=true PYKB01000011.1 Protein Homology CDS 713 1528 . - 0 ID=cds-TGD07241.1;Parent=gene-C9F09_00110;Dbxref=NCBI_GP:TGD07241.1;Name=TGD07241.1;end_range=1528,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461943.1;locus_tag=C9F09_00110;partial=true;product=hypothetical protein;protein_id=TGD07241.1;transl_table=11 ##sequence-region PYKB01000906.1 1 1525 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000906.1 Genbank region 1 1525 . + . ID=PYKB01000906.1:1..1525;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000906.1 Genbank pseudogene 1 1422 . - . ID=gene-C9F09_14905;Name=C9F09_14905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_14905;pseudo=true PYKB01000906.1 Protein Homology CDS 1 1422 . - 0 ID=cds-C9F09_14905;Parent=gene-C9F09_14905;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=C9F09_14905;product=glycogen phosphorylase;pseudo=true;transl_table=11 ##sequence-region PYKB01000728.1 1 1522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000728.1 Genbank region 1 1522 . + . ID=PYKB01000728.1:1..1522;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000728.1 Genbank pseudogene 1 1442 . - . ID=gene-C9F09_11125;Name=C9F09_11125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11125;pseudo=true PYKB01000728.1 Protein Homology CDS 1 1442 . - 0 ID=cds-C9F09_11125;Parent=gene-C9F09_11125;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457158.1;locus_tag=C9F09_11125;product=Ig-like domain repeat protein;pseudo=true;transl_table=11 PYKB01000728.1 Genbank pseudogene 1429 1522 . - . ID=gene-C9F09_11130;Name=C9F09_11130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11130;pseudo=true PYKB01000728.1 Protein Homology CDS 1429 1522 . - 1 ID=cds-C9F09_11130;Parent=gene-C9F09_11130;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015922881.1;locus_tag=C9F09_11130;product=RNA-binding protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001405.1 1 8080 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001405.1 Genbank region 1 8080 . + . ID=PYKB01001405.1:1..8080;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001405.1 Genbank pseudogene 49 2499 . - . ID=gene-C9F09_24130;Name=C9F09_24130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_24130;pseudo=true PYKB01001405.1 Protein Homology CDS 49 2499 . - 0 ID=cds-C9F09_24130;Parent=gene-C9F09_24130;Note=Catalyzes the transfer of electrons from NADH to quinone%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456865.1;locus_tag=C9F09_24130;product=NADH-quinone oxidoreductase subunit G;pseudo=true;transl_table=11 PYKB01001405.1 Genbank gene 2524 3861 . - . ID=gene-C9F09_24135;Name=C9F09_24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24135 PYKB01001405.1 Protein Homology CDS 2524 3861 . - 0 ID=cds-TGC79313.1;Parent=gene-C9F09_24135;Dbxref=NCBI_GP:TGC79313.1;Name=TGC79313.1;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=C9F09_24135;product=NADH-quinone oxidoreductase subunit F;protein_id=TGC79313.1;transl_table=11 PYKB01001405.1 Genbank gene 3858 4358 . - . ID=gene-C9F09_24140;Name=C9F09_24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24140 PYKB01001405.1 Protein Homology CDS 3858 4358 . - 0 ID=cds-TGC79314.1;Parent=gene-C9F09_24140;Dbxref=NCBI_GP:TGC79314.1;Name=TGC79314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124159.1;locus_tag=C9F09_24140;product=NADH-quinone oxidoreductase subunit E;protein_id=TGC79314.1;transl_table=11 PYKB01001405.1 Genbank pseudogene 4361 6163 . - . ID=gene-C9F09_24145;Name=C9F09_24145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_24145;pseudo=true PYKB01001405.1 Protein Homology CDS 4361 6163 . - 0 ID=cds-C9F09_24145;Parent=gene-C9F09_24145;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456868.1;locus_tag=C9F09_24145;product=NADH-quinone oxidoreductase subunit C/D;pseudo=true;transl_table=11 PYKB01001405.1 Genbank gene 6250 6912 . - . ID=gene-C9F09_24150;Name=C9F09_24150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24150 PYKB01001405.1 Protein Homology CDS 6250 6912 . - 0 ID=cds-TGC79315.1;Parent=gene-C9F09_24150;Dbxref=NCBI_GP:TGC79315.1;Name=TGC79315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017490251.1;locus_tag=C9F09_24150;product=NADH-quinone oxidoreductase subunit B;protein_id=TGC79315.1;transl_table=11 PYKB01001405.1 Genbank gene 6928 7371 . - . ID=gene-C9F09_24155;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=C9F09_24155 PYKB01001405.1 Protein Homology CDS 6928 7371 . - 0 ID=cds-TGC79316.1;Parent=gene-C9F09_24155;Dbxref=NCBI_GP:TGC79316.1;Name=TGC79316.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456870.1;locus_tag=C9F09_24155;product=NADH-quinone oxidoreductase subunit A;protein_id=TGC79316.1;transl_table=11 PYKB01001405.1 Genbank gene 7766 7918 . - . ID=gene-C9F09_24160;Name=C9F09_24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24160 PYKB01001405.1 Protein Homology CDS 7766 7918 . - 0 ID=cds-TGC79317.1;Parent=gene-C9F09_24160;Dbxref=NCBI_GP:TGC79317.1;Name=TGC79317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=C9F09_24160;product=hypothetical protein;protein_id=TGC79317.1;transl_table=11 ##sequence-region PYKB01000321.1 1 1516 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000321.1 Genbank region 1 1516 . + . ID=PYKB01000321.1:1..1516;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000321.1 Genbank gene 1 510 . - . ID=gene-C9F09_03595;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=C9F09_03595;partial=true;start_range=.,1 PYKB01000321.1 Protein Homology CDS 1 510 . - 0 ID=cds-TGD01124.1;Parent=gene-C9F09_03595;Dbxref=NCBI_GP:TGD01124.1;Name=TGD01124.1;Note=catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose;gbkey=CDS;gene=fucI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457371.1;locus_tag=C9F09_03595;partial=true;product=L-fucose isomerase;protein_id=TGD01124.1;start_range=.,1;transl_table=11 PYKB01000321.1 Genbank pseudogene 542 1516 . - . ID=gene-C9F09_03600;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=pseudogene;locus_tag=C9F09_03600;pseudo=true PYKB01000321.1 Protein Homology CDS 542 1516 . - 0 ID=cds-C9F09_03600;Parent=gene-C9F09_03600;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=fucP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457370.1;locus_tag=C9F09_03600;product=L-fucose:H+ symporter permease;pseudo=true;transl_table=11 ##sequence-region PYKB01000135.1 1 1514 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000135.1 Genbank region 1 1514 . + . ID=PYKB01000135.1:1..1514;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000135.1 Genbank gene 1 1397 . + . ID=gene-C9F09_01550;Name=C9F09_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_01550;partial=true;start_range=.,1 PYKB01000135.1 Protein Homology CDS 1 1397 . + 2 ID=cds-TGD04744.1;Parent=gene-C9F09_01550;Dbxref=NCBI_GP:TGD04744.1;Name=TGD04744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=C9F09_01550;partial=true;product=glucose-6-phosphate isomerase;protein_id=TGD04744.1;start_range=.,1;transl_table=11 ##sequence-region PYKB01001479.1 1 1498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001479.1 Genbank region 1 1498 . + . ID=PYKB01001479.1:1..1498;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001479.1 Genbank gene 1 564 . + . ID=gene-C9F09_25700;Name=C9F09_25700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25700;partial=true;start_range=.,1 PYKB01001479.1 Protein Homology CDS 1 564 . + 0 ID=cds-TGC77642.1;Parent=gene-C9F09_25700;Dbxref=NCBI_GP:TGC77642.1;Name=TGC77642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=C9F09_25700;partial=true;product=NAD(+) diphosphatase;protein_id=TGC77642.1;start_range=.,1;transl_table=11 PYKB01001479.1 Genbank gene 605 1498 . + . ID=gene-C9F09_25705;Name=C9F09_25705;end_range=1498,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_25705;partial=true PYKB01001479.1 Protein Homology CDS 605 1498 . + 0 ID=cds-TGC77643.1;Parent=gene-C9F09_25705;Dbxref=NCBI_GP:TGC77643.1;Name=TGC77643.1;end_range=1498,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418425.1;locus_tag=C9F09_25705;partial=true;product=uroporphyrinogen decarboxylase;protein_id=TGC77643.1;transl_table=11 ##sequence-region PYKB01001006.1 1 1497 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001006.1 Genbank region 1 1497 . + . ID=PYKB01001006.1:1..1497;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001006.1 Genbank gene 1 960 . + . ID=gene-C9F09_16785;Name=C9F09_16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_16785;partial=true;start_range=.,1 PYKB01001006.1 Protein Homology CDS 1 960 . + 0 ID=cds-TGC88140.1;Parent=gene-C9F09_16785;Dbxref=NCBI_GP:TGC88140.1;Name=TGC88140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=C9F09_16785;partial=true;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=TGC88140.1;start_range=.,1;transl_table=11 PYKB01001006.1 Genbank pseudogene 960 1463 . + . ID=gene-C9F09_16790;Name=C9F09_16790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_16790;pseudo=true PYKB01001006.1 Protein Homology CDS 960 1463 . + 0 ID=cds-C9F09_16790;Parent=gene-C9F09_16790;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454739.1;locus_tag=C9F09_16790;product=cell division protein FtsW;pseudo=true;transl_table=11 ##sequence-region PYKB01001538.1 1 1490 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001538.1 Genbank region 1 1490 . + . ID=PYKB01001538.1:1..1490;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001538.1 Genbank pseudogene 73 1490 . - . ID=gene-C9F09_26820;Name=C9F09_26820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_26820;pseudo=true PYKB01001538.1 Protein Homology CDS 73 1490 . - 2 ID=cds-C9F09_26820;Parent=gene-C9F09_26820;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457167.1;locus_tag=C9F09_26820;product=phage tail tape measure protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001051.1 1 1488 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001051.1 Genbank region 1 1488 . + . ID=PYKB01001051.1:1..1488;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001051.1 Genbank gene 1 806 . + . ID=gene-C9F09_17655;Name=C9F09_17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17655;partial=true;start_range=.,1 PYKB01001051.1 Protein Homology CDS 1 806 . + 2 ID=cds-TGC87078.1;Parent=gene-C9F09_17655;Dbxref=NCBI_GP:TGC87078.1;Name=TGC87078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457633.1;locus_tag=C9F09_17655;partial=true;product=glycerate 2-kinase;protein_id=TGC87078.1;start_range=.,1;transl_table=11 PYKB01001051.1 Genbank gene 839 1213 . + . ID=gene-C9F09_17660;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=C9F09_17660 PYKB01001051.1 cmsearch RNase_P_RNA 839 1213 . + . ID=rna-C9F09_17660;Parent=gene-C9F09_17660;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00010,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_17660;product=RNase P RNA component class A PYKB01001051.1 cmsearch exon 839 1213 . + . ID=exon-C9F09_17660-1;Parent=rna-C9F09_17660;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00010,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_17660;product=RNase P RNA component class A ##sequence-region PYKB01001733.1 1 1481 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001733.1 Genbank region 1 1481 . + . ID=PYKB01001733.1:1..1481;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001733.1 Genbank gene 1 233 . + . ID=gene-C9F09_30365;Name=C9F09_30365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30365;partial=true;start_range=.,1 PYKB01001733.1 Protein Homology CDS 1 233 . + 2 ID=cds-TGC71028.1;Parent=gene-C9F09_30365;Dbxref=NCBI_GP:TGC71028.1;Name=TGC71028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456116.1;locus_tag=C9F09_30365;partial=true;product=TyeA family type III secretion system gatekeeper subunit;protein_id=TGC71028.1;start_range=.,1;transl_table=11 PYKB01001733.1 Genbank gene 291 659 . + . ID=gene-C9F09_30370;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=C9F09_30370 PYKB01001733.1 Protein Homology CDS 291 659 . + 0 ID=cds-TGC71029.1;Parent=gene-C9F09_30370;Dbxref=NCBI_GP:TGC71029.1;Name=TGC71029.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=C9F09_30370;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=TGC71029.1;transl_table=11 PYKB01001733.1 Genbank pseudogene 644 1453 . + . ID=gene-C9F09_30375;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=pseudogene;locus_tag=C9F09_30375;pseudo=true PYKB01001733.1 Protein Homology CDS 644 1453 . + 0 ID=cds-C9F09_30375;Parent=gene-C9F09_30375;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456114.1;locus_tag=C9F09_30375;product=SPI-2 type III secretion system apparatus protein SsaV;pseudo=true;transl_table=11 ##sequence-region PYKB01001164.1 1 1479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001164.1 Genbank region 1 1479 . + . ID=PYKB01001164.1:1..1479;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001164.1 Genbank gene 1 220 . - . ID=gene-C9F09_19665;Name=C9F09_19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19665;partial=true;start_range=.,1 PYKB01001164.1 Protein Homology CDS 1 220 . - 0 ID=cds-TGC84480.1;Parent=gene-C9F09_19665;Dbxref=NCBI_GP:TGC84480.1;Name=TGC84480.1;Note=CobD%3B CbiB in Salmonella%3B converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=C9F09_19665;partial=true;product=cobalamin biosynthesis protein CobD;protein_id=TGC84480.1;start_range=.,1;transl_table=11 PYKB01001164.1 Genbank gene 217 1479 . - . ID=gene-C9F09_19670;Name=C9F09_19670;end_range=1479,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19670;partial=true PYKB01001164.1 Protein Homology CDS 217 1479 . - 0 ID=cds-TGC84481.1;Parent=gene-C9F09_19670;Dbxref=NCBI_GP:TGC84481.1;Name=TGC84481.1;end_range=1479,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=C9F09_19670;partial=true;product=cobyrinic acid a%2Cc-diamide synthase;protein_id=TGC84481.1;transl_table=11 ##sequence-region PYKB01000460.1 1 1478 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000460.1 Genbank region 1 1478 . + . ID=PYKB01000460.1:1..1478;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000460.1 Genbank pseudogene 1 1478 . - . ID=gene-C9F09_05750;Name=C9F09_05750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_05750;pseudo=true PYKB01000460.1 Protein Homology CDS 1 1478 . - 0 ID=cds-C9F09_05750;Parent=gene-C9F09_05750;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=C9F09_05750;product=phenylalanine--tRNA ligase subunit beta;pseudo=true;transl_table=11 ##sequence-region PYKB01001754.1 1 1477 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001754.1 Genbank region 1 1477 . + . ID=PYKB01001754.1:1..1477;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001754.1 Genbank gene 434 1477 . + . ID=gene-C9F09_30710;Name=putA;end_range=1477,.;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=C9F09_30710;partial=true PYKB01001754.1 Protein Homology CDS 434 1477 . + 0 ID=cds-TGC70368.1;Parent=gene-C9F09_30710;Dbxref=NCBI_GP:TGC70368.1;Name=TGC70368.1;end_range=1477,.;gbkey=CDS;gene=putA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001462364.1;locus_tag=C9F09_30710;partial=true;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA;protein_id=TGC70368.1;transl_table=11 ##sequence-region PYKB01001715.1 1 8024 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001715.1 Genbank region 1 8024 . + . ID=PYKB01001715.1:1..8024;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001715.1 Genbank gene 1 314 . - . ID=gene-C9F09_30000;Name=C9F09_30000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30000;partial=true;start_range=.,1 PYKB01001715.1 Protein Homology CDS 1 314 . - 0 ID=cds-TGC71505.1;Parent=gene-C9F09_30000;Dbxref=NCBI_GP:TGC71505.1;Name=TGC71505.1;Note=membrane protein%2C may be involved in the transfer of electrons from quinones to c-type cytochromes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458578.1;locus_tag=C9F09_30000;partial=true;product=cytochrome c nitrite reductase subunit NrfD;protein_id=TGC71505.1;start_range=.,1;transl_table=11 PYKB01001715.1 Genbank gene 311 982 . - . ID=gene-C9F09_30005;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=C9F09_30005 PYKB01001715.1 Protein Homology CDS 311 982 . - 0 ID=cds-TGC71506.1;Parent=gene-C9F09_30005;Dbxref=NCBI_GP:TGC71506.1;Name=TGC71506.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458577.1;locus_tag=C9F09_30005;product=cytochrome c nitrite reductase Fe-S protein;protein_id=TGC71506.1;transl_table=11 PYKB01001715.1 Genbank gene 979 1545 . - . ID=gene-C9F09_30010;Name=C9F09_30010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30010 PYKB01001715.1 Protein Homology CDS 979 1545 . - 0 ID=cds-TGC71507.1;Parent=gene-C9F09_30010;Dbxref=NCBI_GP:TGC71507.1;Name=TGC71507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458576.1;locus_tag=C9F09_30010;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=TGC71507.1;transl_table=11 PYKB01001715.1 Genbank gene 1572 3026 . - . ID=gene-C9F09_30015;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=C9F09_30015 PYKB01001715.1 Protein Homology CDS 1572 3026 . - 0 ID=cds-TGC71508.1;Parent=gene-C9F09_30015;Dbxref=NCBI_GP:TGC71508.1;Name=TGC71508.1;Note=catalyzes the formate-dependent reduction of nitrite to ammonia%3B cytochrome C552;gbkey=CDS;gene=nrfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458575.1;locus_tag=C9F09_30015;product=ammonia-forming cytochrome c nitrite reductase subunit c552;protein_id=TGC71508.1;transl_table=11 PYKB01001715.1 Genbank gene 3125 3271 . - . ID=gene-C9F09_30020;Name=C9F09_30020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30020 PYKB01001715.1 Protein Homology CDS 3125 3271 . - 0 ID=cds-TGC71509.1;Parent=gene-C9F09_30020;Dbxref=NCBI_GP:TGC71509.1;Name=TGC71509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463141.1;locus_tag=C9F09_30020;product=entericidin B precursor;protein_id=TGC71509.1;transl_table=11 PYKB01001715.1 Genbank gene 3458 5416 . + . ID=gene-C9F09_30025;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=C9F09_30025 PYKB01001715.1 Protein Homology CDS 3458 5416 . + 0 ID=cds-TGC71510.1;Parent=gene-C9F09_30025;Dbxref=NCBI_GP:TGC71510.1;Name=TGC71510.1;gbkey=CDS;gene=acs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006816721.1;locus_tag=C9F09_30025;product=acetate--CoA ligase;protein_id=TGC71510.1;transl_table=11 PYKB01001715.1 Genbank gene 5482 5661 . - . ID=gene-C9F09_30030;Name=C9F09_30030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30030 PYKB01001715.1 Protein Homology CDS 5482 5661 . - 0 ID=cds-TGC71513.1;Parent=gene-C9F09_30030;Dbxref=NCBI_GP:TGC71513.1;Name=TGC71513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218551.1;locus_tag=C9F09_30030;product=hypothetical protein;protein_id=TGC71513.1;transl_table=11 PYKB01001715.1 Genbank gene 5656 5970 . + . ID=gene-C9F09_30035;Name=C9F09_30035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30035 PYKB01001715.1 Protein Homology CDS 5656 5970 . + 0 ID=cds-TGC71511.1;Parent=gene-C9F09_30035;Dbxref=NCBI_GP:TGC71511.1;Name=TGC71511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458572.1;locus_tag=C9F09_30035;product=DUF485 domain-containing protein;protein_id=TGC71511.1;transl_table=11 PYKB01001715.1 Genbank gene 5967 7616 . + . ID=gene-C9F09_30040;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=C9F09_30040 PYKB01001715.1 Protein Homology CDS 5967 7616 . + 0 ID=cds-TGC71512.1;Parent=gene-C9F09_30040;Dbxref=NCBI_GP:TGC71512.1;Name=TGC71512.1;gbkey=CDS;gene=actP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132593.1;locus_tag=C9F09_30040;product=cation acetate symporter;protein_id=TGC71512.1;transl_table=11 PYKB01001715.1 Genbank pseudogene 7655 8024 . - . ID=gene-C9F09_30045;Name=C9F09_30045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_30045;pseudo=true PYKB01001715.1 Protein Homology CDS 7655 8024 . - 1 ID=cds-C9F09_30045;Parent=gene-C9F09_30045;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458570.1;locus_tag=C9F09_30045;product=murein hydrolase effector protein LrgB;pseudo=true;transl_table=11 ##sequence-region PYKB01001097.1 1 1475 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001097.1 Genbank region 1 1475 . + . ID=PYKB01001097.1:1..1475;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001097.1 Genbank pseudogene 1 1411 . - . ID=gene-C9F09_18390;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=pseudogene;locus_tag=C9F09_18390;pseudo=true PYKB01001097.1 Protein Homology CDS 1 1411 . - 0 ID=cds-C9F09_18390;Parent=gene-C9F09_18390;Note=catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=gltB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=C9F09_18390;product=glutamate synthase large subunit;pseudo=true;transl_table=11 ##sequence-region PYKB01001719.1 1 1472 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001719.1 Genbank region 1 1472 . + . ID=PYKB01001719.1:1..1472;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001719.1 Genbank gene 1 228 . - . ID=gene-C9F09_30150;Name=C9F09_30150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30150;partial=true;start_range=.,1 PYKB01001719.1 Protein Homology CDS 1 228 . - 0 ID=cds-TGC71441.1;Parent=gene-C9F09_30150;Dbxref=NCBI_GP:TGC71441.1;Name=TGC71441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455931.1;locus_tag=C9F09_30150;partial=true;product=DUF1264 domain-containing protein;protein_id=TGC71441.1;start_range=.,1;transl_table=11 PYKB01001719.1 Genbank gene 371 700 . - . ID=gene-C9F09_30155;Name=C9F09_30155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_30155 PYKB01001719.1 Protein Homology CDS 371 700 . - 0 ID=cds-TGC71442.1;Parent=gene-C9F09_30155;Dbxref=NCBI_GP:TGC71442.1;Name=TGC71442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455930.1;locus_tag=C9F09_30155;product=acid-resistance protein;protein_id=TGC71442.1;transl_table=11 PYKB01001719.1 Genbank pseudogene 1051 1392 . - . ID=gene-C9F09_30160;Name=C9F09_30160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_30160;pseudo=true PYKB01001719.1 Protein Homology CDS 1051 1392 . - 0 ID=cds-C9F09_30160;Parent=gene-C9F09_30160;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455927.1;locus_tag=C9F09_30160;product=OsmC family peroxiredoxin;pseudo=true;transl_table=11 ##sequence-region PYKB01001168.1 1 1470 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001168.1 Genbank region 1 1470 . + . ID=PYKB01001168.1:1..1470;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001168.1 Genbank gene 1 548 . + . ID=gene-C9F09_19755;Name=C9F09_19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19755;partial=true;start_range=.,1 PYKB01001168.1 Protein Homology CDS 1 548 . + 2 ID=cds-TGC84342.1;Parent=gene-C9F09_19755;Dbxref=NCBI_GP:TGC84342.1;Name=TGC84342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456517.1;locus_tag=C9F09_19755;partial=true;product=cystine ABC transporter substrate-binding protein;protein_id=TGC84342.1;start_range=.,1;transl_table=11 PYKB01001168.1 Genbank gene 702 1470 . + . ID=gene-C9F09_19760;Name=C9F09_19760;end_range=1470,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_19760;partial=true PYKB01001168.1 Protein Homology CDS 702 1470 . + 0 ID=cds-TGC84343.1;Parent=gene-C9F09_19760;Dbxref=NCBI_GP:TGC84343.1;Name=TGC84343.1;Note=catalyzes the formation of pyruvate from D-cysteine;end_range=1470,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456516.1;locus_tag=C9F09_19760;partial=true;product=D-cysteine desulfhydrase;protein_id=TGC84343.1;transl_table=11 ##sequence-region PYKB01000817.1 1 1469 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000817.1 Genbank region 1 1469 . + . ID=PYKB01000817.1:1..1469;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000817.1 Genbank gene 1 434 . + . ID=gene-C9F09_12775;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=C9F09_12775;partial=true;start_range=.,1 PYKB01000817.1 Protein Homology CDS 1 434 . + 2 ID=cds-TGC91892.1;Parent=gene-C9F09_12775;Dbxref=NCBI_GP:TGC91892.1;Name=TGC91892.1;gbkey=CDS;gene=chiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455248.1;locus_tag=C9F09_12775;partial=true;product=chitoporin;protein_id=TGC91892.1;start_range=.,1;transl_table=11 PYKB01000817.1 Genbank gene 484 816 . + . ID=gene-C9F09_12780;Name=C9F09_12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12780 PYKB01000817.1 Protein Homology CDS 484 816 . + 0 ID=cds-TGC91893.1;Parent=gene-C9F09_12780;Dbxref=NCBI_GP:TGC91893.1;Name=TGC91893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455249.1;locus_tag=C9F09_12780;product=hypothetical protein;protein_id=TGC91893.1;transl_table=11 PYKB01000817.1 Genbank gene 865 1469 . - . ID=gene-C9F09_12785;Name=tcuC;end_range=1469,.;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=C9F09_12785;partial=true PYKB01000817.1 Protein Homology CDS 865 1469 . - 2 ID=cds-TGC91894.1;Parent=gene-C9F09_12785;Dbxref=NCBI_GP:TGC91894.1;Name=TGC91894.1;end_range=1469,.;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455250.1;locus_tag=C9F09_12785;partial=true;product=tricarballylate/proton symporter TcuC;protein_id=TGC91894.1;transl_table=11 ##sequence-region PYKB01000555.1 1 1467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000555.1 Genbank region 1 1467 . + . ID=PYKB01000555.1:1..1467;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000555.1 Genbank gene 1 398 . + . ID=gene-C9F09_07660;Name=C9F09_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07660;partial=true;start_range=.,1 PYKB01000555.1 Protein Homology CDS 1 398 . + 2 ID=cds-TGC96375.1;Parent=gene-C9F09_07660;Dbxref=NCBI_GP:TGC96375.1;Name=TGC96375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454852.1;locus_tag=C9F09_07660;partial=true;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=TGC96375.1;start_range=.,1;transl_table=11 PYKB01000555.1 Genbank gene 509 1467 . + . ID=gene-C9F09_07665;Name=proS;end_range=1467,.;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=C9F09_07665;partial=true PYKB01000555.1 Protein Homology CDS 509 1467 . + 0 ID=cds-TGC96376.1;Parent=gene-C9F09_07665;Dbxref=NCBI_GP:TGC96376.1;Name=TGC96376.1;end_range=1467,.;gbkey=CDS;gene=proS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=C9F09_07665;partial=true;product=proline--tRNA ligase;protein_id=TGC96376.1;transl_table=11 ##sequence-region PYKB01000516.1 1 1463 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000516.1 Genbank region 1 1463 . + . ID=PYKB01000516.1:1..1463;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000516.1 Genbank gene 1 77 . + . ID=gene-C9F09_06925;Name=C9F09_06925;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_06925 PYKB01000516.1 tRNAscan-SE tRNA 1 77 . + . ID=rna-C9F09_06925;Parent=gene-C9F09_06925;anticodon=(pos:35..37);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_06925;product=tRNA-Asp PYKB01000516.1 tRNAscan-SE exon 1 77 . + . ID=exon-C9F09_06925-1;Parent=rna-C9F09_06925;anticodon=(pos:35..37);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_06925;product=tRNA-Asp PYKB01000516.1 Genbank gene 398 1453 . - . ID=gene-C9F09_06930;Name=C9F09_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06930 PYKB01000516.1 Protein Homology CDS 398 1453 . - 0 ID=cds-TGC97191.1;Parent=gene-C9F09_06930;Dbxref=NCBI_GP:TGC97191.1;Name=TGC97191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=C9F09_06930;product=cytoplasmic protein;protein_id=TGC97191.1;transl_table=11 ##sequence-region PYKB01001059.1 1 1463 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001059.1 Genbank region 1 1463 . + . ID=PYKB01001059.1:1..1463;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001059.1 Genbank gene 1 521 . - . ID=gene-C9F09_17770;Name=C9F09_17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17770;partial=true;start_range=.,1 PYKB01001059.1 Protein Homology CDS 1 521 . - 0 ID=cds-TGC86911.1;Parent=gene-C9F09_17770;Dbxref=NCBI_GP:TGC86911.1;Name=TGC86911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460803.1;locus_tag=C9F09_17770;partial=true;product=Free methionine-R-sulfoxide reductase;protein_id=TGC86911.1;start_range=.,1;transl_table=11 PYKB01001059.1 Genbank gene 563 1463 . + . ID=gene-C9F09_17775;Name=C9F09_17775;end_range=1463,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17775;partial=true PYKB01001059.1 Protein Homology CDS 563 1463 . + 0 ID=cds-TGC86912.1;Parent=gene-C9F09_17775;Dbxref=NCBI_GP:TGC86912.1;Name=TGC86912.1;end_range=1463,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=C9F09_17775;partial=true;product=hypothetical protein;protein_id=TGC86912.1;transl_table=11 ##sequence-region PYKB01000581.1 1 1463 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000581.1 Genbank region 1 1463 . + . ID=PYKB01000581.1:1..1463;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000581.1 Genbank gene 1 1083 . + . ID=gene-C9F09_08315;Name=C9F09_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08315;partial=true;start_range=.,1 PYKB01000581.1 Protein Homology CDS 1 1083 . + 0 ID=cds-TGC95781.1;Parent=gene-C9F09_08315;Dbxref=NCBI_GP:TGC95781.1;Name=TGC95781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=C9F09_08315;partial=true;product=DUF4153 domain-containing protein;protein_id=TGC95781.1;start_range=.,1;transl_table=11 PYKB01000581.1 Genbank gene 1194 1463 . - . ID=gene-C9F09_08320;Name=C9F09_08320;end_range=1463,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_08320;partial=true PYKB01000581.1 Protein Homology CDS 1194 1463 . - 0 ID=cds-TGC95782.1;Parent=gene-C9F09_08320;Dbxref=NCBI_GP:TGC95782.1;Name=TGC95782.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;end_range=1463,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458406.1;locus_tag=C9F09_08320;partial=true;product=redox-regulated molecular chaperone Hsp33;protein_id=TGC95782.1;transl_table=11 ##sequence-region PYKB01000513.1 1 1450 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000513.1 Genbank region 1 1450 . + . ID=PYKB01000513.1:1..1450;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000513.1 Genbank gene 423 1031 . + . ID=gene-C9F09_06820;Name=C9F09_06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06820 PYKB01000513.1 Protein Homology CDS 423 1031 . + 0 ID=cds-TGC97286.1;Parent=gene-C9F09_06820;Dbxref=NCBI_GP:TGC97286.1;Name=TGC97286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456293.1;locus_tag=C9F09_06820;product=aminoacyl-tRNA hydrolase;protein_id=TGC97286.1;transl_table=11 PYKB01000513.1 Genbank gene 1148 1450 . + . ID=gene-C9F09_06825;Name=ychF;end_range=1450,.;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=C9F09_06825;partial=true PYKB01000513.1 Protein Homology CDS 1148 1450 . + 0 ID=cds-TGC97287.1;Parent=gene-C9F09_06825;Dbxref=NCBI_GP:TGC97287.1;Name=TGC97287.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;end_range=1450,.;gbkey=CDS;gene=ychF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=C9F09_06825;partial=true;product=redox-regulated ATPase YchF;protein_id=TGC97287.1;transl_table=11 ##sequence-region PYKB01000830.1 1 1447 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000830.1 Genbank region 1 1447 . + . ID=PYKB01000830.1:1..1447;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000830.1 Genbank gene 1 711 . + . ID=gene-C9F09_13080;Name=C9F09_13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13080;partial=true;start_range=.,1 PYKB01000830.1 Protein Homology CDS 1 711 . + 0 ID=cds-TGC91629.1;Parent=gene-C9F09_13080;Dbxref=NCBI_GP:TGC91629.1;Name=TGC91629.1;Note=membrane protein%2C may be involved in the transfer of electrons from quinones to c-type cytochromes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=C9F09_13080;partial=true;product=cytochrome c nitrite reductase subunit NrfD;protein_id=TGC91629.1;start_range=.,1;transl_table=11 PYKB01000830.1 Genbank gene 704 1447 . + . ID=gene-C9F09_13085;Name=C9F09_13085;end_range=1447,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13085;partial=true PYKB01000830.1 Protein Homology CDS 704 1447 . + 0 ID=cds-TGC91630.1;Parent=gene-C9F09_13085;Dbxref=NCBI_GP:TGC91630.1;Name=TGC91630.1;end_range=1447,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9F09_13085;partial=true;product=heme lyase NrfEFG subunit NrfE;protein_id=TGC91630.1;transl_table=11 ##sequence-region PYKB01000531.1 1 7996 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000531.1 Genbank region 1 7996 . + . ID=PYKB01000531.1:1..7996;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000531.1 Genbank gene 1 392 . + . ID=gene-C9F09_07200;Name=C9F09_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07200;partial=true;start_range=.,1 PYKB01000531.1 Protein Homology CDS 1 392 . + 2 ID=cds-TGC96942.1;Parent=gene-C9F09_07200;Dbxref=NCBI_GP:TGC96942.1;Name=TGC96942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458400.1;locus_tag=C9F09_07200;partial=true;product=hypothetical protein;protein_id=TGC96942.1;start_range=.,1;transl_table=11 PYKB01000531.1 Genbank gene 579 809 . + . ID=gene-C9F09_07205;Name=C9F09_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07205 PYKB01000531.1 Protein Homology CDS 579 809 . + 0 ID=cds-TGC96943.1;Parent=gene-C9F09_07205;Dbxref=NCBI_GP:TGC96943.1;Name=TGC96943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751774.1;locus_tag=C9F09_07205;product=hypothetical protein;protein_id=TGC96943.1;transl_table=11 PYKB01000531.1 Genbank gene 829 1056 . + . ID=gene-C9F09_07210;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=C9F09_07210 PYKB01000531.1 Protein Homology CDS 829 1056 . + 0 ID=cds-TGC96944.1;Parent=gene-C9F09_07210;Dbxref=NCBI_GP:TGC96944.1;Name=TGC96944.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458399.1;locus_tag=C9F09_07210;product=ferrous iron transporter A;protein_id=TGC96944.1;transl_table=11 PYKB01000531.1 Genbank gene 1075 3393 . + . ID=gene-C9F09_07215;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=C9F09_07215 PYKB01000531.1 Protein Homology CDS 1075 3393 . + 0 ID=cds-TGC96945.1;Parent=gene-C9F09_07215;Dbxref=NCBI_GP:TGC96945.1;Name=TGC96945.1;Note=cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake;gbkey=CDS;gene=feoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=C9F09_07215;product=ferrous iron transporter B;protein_id=TGC96945.1;transl_table=11 PYKB01000531.1 Genbank gene 3406 3642 . + . ID=gene-C9F09_07220;Name=C9F09_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07220 PYKB01000531.1 Protein Homology CDS 3406 3642 . + 0 ID=cds-TGC96946.1;Parent=gene-C9F09_07220;Dbxref=NCBI_GP:TGC96946.1;Name=TGC96946.1;Note=regulatory protein that controls transcription of feoABC genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458397.1;locus_tag=C9F09_07220;product=ferrous iron transporter C;protein_id=TGC96946.1;transl_table=11 PYKB01000531.1 Genbank gene 3877 4803 . + . ID=gene-C9F09_07225;Name=C9F09_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07225 PYKB01000531.1 Protein Homology CDS 3877 4803 . + 0 ID=cds-TGC96947.1;Parent=gene-C9F09_07225;Dbxref=NCBI_GP:TGC96947.1;Name=TGC96947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=C9F09_07225;product=ISNCY family transposase;protein_id=TGC96947.1;transl_table=11 PYKB01000531.1 Genbank gene 4839 5609 . - . ID=gene-C9F09_07230;Name=C9F09_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07230 PYKB01000531.1 Protein Homology CDS 4839 5609 . - 0 ID=cds-TGC96948.1;Parent=gene-C9F09_07230;Dbxref=NCBI_GP:TGC96948.1;Name=TGC96948.1;Note=Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=C9F09_07230;product=pimeloyl-[acyl-carrier protein] methyl ester esterase;protein_id=TGC96948.1;transl_table=11 PYKB01000531.1 Genbank gene 5647 6330 . + . ID=gene-C9F09_07235;Name=C9F09_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07235 PYKB01000531.1 Protein Homology CDS 5647 6330 . + 0 ID=cds-TGC96949.1;Parent=gene-C9F09_07235;Dbxref=NCBI_GP:TGC96949.1;Name=TGC96949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=C9F09_07235;product=DNA utilization protein GntX;protein_id=TGC96949.1;transl_table=11 PYKB01000531.1 Genbank gene 6389 6964 . + . ID=gene-C9F09_07240;Name=C9F09_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07240 PYKB01000531.1 Protein Homology CDS 6389 6964 . + 0 ID=cds-TGC96950.1;Parent=gene-C9F09_07240;Dbxref=NCBI_GP:TGC96950.1;Name=TGC96950.1;Note=cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=C9F09_07240;product=Fe-S biogenesis protein NfuA;protein_id=TGC96950.1;transl_table=11 PYKB01000531.1 Genbank gene 7341 7996 . + . ID=gene-C9F09_07245;Name=C9F09_07245;end_range=7996,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_07245;partial=true PYKB01000531.1 Protein Homology CDS 7341 7996 . + 0 ID=cds-TGC96951.1;Parent=gene-C9F09_07245;Dbxref=NCBI_GP:TGC96951.1;Name=TGC96951.1;end_range=7996,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458392.1;locus_tag=C9F09_07245;partial=true;product=gluconate transporter;protein_id=TGC96951.1;transl_table=11 ##sequence-region PYKB01000544.1 1 1445 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000544.1 Genbank region 1 1445 . + . ID=PYKB01000544.1:1..1445;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000544.1 Genbank pseudogene 28 792 . - . ID=gene-C9F09_07410;Name=C9F09_07410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07410;pseudo=true PYKB01000544.1 Protein Homology CDS 28 792 . - 0 ID=cds-C9F09_07410;Parent=gene-C9F09_07410;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=C9F09_07410;product=amidohydrolase;pseudo=true;transl_table=11 PYKB01000544.1 Genbank pseudogene 1191 1445 . - . ID=gene-C9F09_07415;Name=C9F09_07415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_07415;pseudo=true PYKB01000544.1 Protein Homology CDS 1191 1445 . - 0 ID=cds-C9F09_07415;Parent=gene-C9F09_07415;Note=involved in the transport of aldohexuronates%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457529.1;locus_tag=C9F09_07415;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKB01000875.1 1 1442 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000875.1 Genbank region 1 1442 . + . ID=PYKB01000875.1:1..1442;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000875.1 Genbank gene 1 1253 . + . ID=gene-C9F09_14250;Name=C9F09_14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14250;partial=true;start_range=.,1 PYKB01000875.1 Protein Homology CDS 1 1253 . + 2 ID=cds-TGC90698.1;Parent=gene-C9F09_14250;Dbxref=NCBI_GP:TGC90698.1;Name=TGC90698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455269.1;locus_tag=C9F09_14250;partial=true;product=MFS transporter;protein_id=TGC90698.1;start_range=.,1;transl_table=11 PYKB01000875.1 Genbank gene 1292 1442 . - . ID=gene-C9F09_14255;Name=C9F09_14255;end_range=1442,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_14255;partial=true PYKB01000875.1 Protein Homology CDS 1292 1442 . - 1 ID=cds-TGC90699.1;Parent=gene-C9F09_14255;Dbxref=NCBI_GP:TGC90699.1;Name=TGC90699.1;Note=UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent;end_range=1442,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000152358.1;locus_tag=C9F09_14255;partial=true;product=deoxyribodipyrimidine photo-lyase;protein_id=TGC90699.1;transl_table=11 ##sequence-region PYKB01001745.1 1 1442 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001745.1 Genbank region 1 1442 . + . ID=PYKB01001745.1:1..1442;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001745.1 Genbank gene 1 213 . + . ID=gene-C9F09_30570;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=C9F09_30570;partial=true;start_range=.,1 PYKB01001745.1 Protein Homology CDS 1 213 . + 0 ID=cds-TGC70659.1;Parent=gene-C9F09_30570;Dbxref=NCBI_GP:TGC70659.1;Name=TGC70659.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=C9F09_30570;partial=true;product=molecular chaperone DnaK;protein_id=TGC70659.1;start_range=.,1;transl_table=11 PYKB01001745.1 Genbank gene 299 1411 . + . ID=gene-C9F09_30575;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=C9F09_30575 PYKB01001745.1 Protein Homology CDS 299 1411 . + 0 ID=cds-TGC70660.1;Parent=gene-C9F09_30575;Dbxref=NCBI_GP:TGC70660.1;Name=TGC70660.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454623.1;locus_tag=C9F09_30575;product=molecular chaperone DnaJ;protein_id=TGC70660.1;transl_table=11 ##sequence-region PYKB01001411.1 1 1434 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001411.1 Genbank region 1 1434 . + . ID=PYKB01001411.1:1..1434;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001411.1 Genbank gene 62 268 . + . ID=gene-C9F09_24240;Name=C9F09_24240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24240 PYKB01001411.1 Protein Homology CDS 62 268 . + 0 ID=cds-TGC79219.1;Parent=gene-C9F09_24240;Dbxref=NCBI_GP:TGC79219.1;Name=TGC79219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991994.1;locus_tag=C9F09_24240;product=hypothetical protein;protein_id=TGC79219.1;transl_table=11 PYKB01001411.1 Genbank gene 316 1062 . - . ID=gene-C9F09_24245;Name=C9F09_24245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24245 PYKB01001411.1 Protein Homology CDS 316 1062 . - 0 ID=cds-TGC79220.1;Parent=gene-C9F09_24245;Dbxref=NCBI_GP:TGC79220.1;Name=TGC79220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457463.1;locus_tag=C9F09_24245;product=oxidative stress defense protein;protein_id=TGC79220.1;transl_table=11 PYKB01001411.1 Genbank gene 1156 1434 . - . ID=gene-C9F09_24250;Name=C9F09_24250;end_range=1434,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_24250;partial=true PYKB01001411.1 Protein Homology CDS 1156 1434 . - 0 ID=cds-TGC79221.1;Parent=gene-C9F09_24250;Dbxref=NCBI_GP:TGC79221.1;Name=TGC79221.1;Note=Involved in the export of arginine;end_range=1434,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457464.1;locus_tag=C9F09_24250;partial=true;product=arginine transporter;protein_id=TGC79221.1;transl_table=11 ##sequence-region PYKB01000770.1 1 1431 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000770.1 Genbank region 1 1431 . + . ID=PYKB01000770.1:1..1431;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000770.1 Genbank pseudogene 1 875 . - . ID=gene-C9F09_11950;Name=C9F09_11950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11950;pseudo=true PYKB01000770.1 Protein Homology CDS 1 875 . - 0 ID=cds-C9F09_11950;Parent=gene-C9F09_11950;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=C9F09_11950;product=IS3 family transposase;pseudo=true;transl_table=11 PYKB01000770.1 Genbank pseudogene 1083 1383 . + . ID=gene-C9F09_11955;Name=C9F09_11955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_11955;pseudo=true PYKB01000770.1 Protein Homology CDS 1083 1383 . + 0 ID=cds-C9F09_11955;Parent=gene-C9F09_11955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114402.1;locus_tag=C9F09_11955;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKB01001356.1 1 1431 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001356.1 Genbank region 1 1431 . + . ID=PYKB01001356.1:1..1431;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001356.1 Genbank gene 212 454 . + . ID=gene-C9F09_23310;Name=C9F09_23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23310 PYKB01001356.1 Protein Homology CDS 212 454 . + 0 ID=cds-TGC80434.1;Parent=gene-C9F09_23310;Dbxref=NCBI_GP:TGC80434.1;Name=TGC80434.1;Note=Qin prophage%3B bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/transcriptional repressor;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458866.1;locus_tag=C9F09_23310;product=type II toxin-antitoxin system antitoxin%2C RelB/DinJ family;protein_id=TGC80434.1;transl_table=11 PYKB01001356.1 Genbank gene 444 728 . + . ID=gene-C9F09_23315;Name=C9F09_23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23315 PYKB01001356.1 Protein Homology CDS 444 728 . + 0 ID=cds-TGC80435.1;Parent=gene-C9F09_23315;Dbxref=NCBI_GP:TGC80435.1;Name=TGC80435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458867.1;locus_tag=C9F09_23315;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=TGC80435.1;transl_table=11 PYKB01001356.1 Genbank gene 732 1196 . - . ID=gene-C9F09_23320;Name=C9F09_23320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_23320 PYKB01001356.1 Protein Homology CDS 732 1196 . - 0 ID=cds-TGC80436.1;Parent=gene-C9F09_23320;Dbxref=NCBI_GP:TGC80436.1;Name=TGC80436.1;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=C9F09_23320;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=TGC80436.1;transl_table=11 ##sequence-region PYKB01000826.1 1 1431 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000826.1 Genbank region 1 1431 . + . ID=PYKB01000826.1:1..1431;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000826.1 Genbank pseudogene 29 334 . + . ID=gene-C9F09_13015;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=pseudogene;gene_synonym=opgG;locus_tag=C9F09_13015;pseudo=true PYKB01000826.1 Protein Homology CDS 29 334 . + 0 ID=cds-C9F09_13015;Parent=gene-C9F09_13015;Note=involved in the biosynthesis of osmoregulated periplasmic glucans%3B required for the assembly of the polyglucose structure of glucan%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455644.1;locus_tag=C9F09_13015;product=glucan biosynthesis protein G;pseudo=true;transl_table=11 PYKB01000826.1 Genbank gene 327 1431 . + . ID=gene-C9F09_13020;Name=C9F09_13020;end_range=1431,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_13020;partial=true PYKB01000826.1 Protein Homology CDS 327 1431 . + 0 ID=cds-TGC91671.1;Parent=gene-C9F09_13020;Dbxref=NCBI_GP:TGC91671.1;Name=TGC91671.1;Note=necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space;end_range=1431,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460122.1;locus_tag=C9F09_13020;partial=true;product=glucan biosynthesis glucosyltransferase H;protein_id=TGC91671.1;transl_table=11 ##sequence-region PYKB01000798.1 1 1430 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000798.1 Genbank region 1 1430 . + . ID=PYKB01000798.1:1..1430;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000798.1 Genbank pseudogene 77 577 . + . ID=gene-C9F09_12405;Name=C9F09_12405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_12405;pseudo=true PYKB01000798.1 Protein Homology CDS 77 577 . + 0 ID=cds-C9F09_12405;Parent=gene-C9F09_12405;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=C9F09_12405;product=transcriptional regulator;pseudo=true;transl_table=11 PYKB01000798.1 Genbank gene 637 744 . + . ID=gene-C9F09_12410;Name=C9F09_12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12410 PYKB01000798.1 Protein Homology CDS 637 744 . + 0 ID=cds-TGC92182.1;Parent=gene-C9F09_12410;Dbxref=NCBI_GP:TGC92182.1;Name=TGC92182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456721.1;locus_tag=C9F09_12410;product=hypothetical protein;protein_id=TGC92182.1;transl_table=11 PYKB01000798.1 Genbank gene 725 1378 . - . ID=gene-C9F09_12415;Name=C9F09_12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_12415 PYKB01000798.1 Protein Homology CDS 725 1378 . - 0 ID=cds-TGC92183.1;Parent=gene-C9F09_12415;Dbxref=NCBI_GP:TGC92183.1;Name=TGC92183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001573480.1;locus_tag=C9F09_12415;product=osmoprotectant uptake system permease;protein_id=TGC92183.1;transl_table=11 ##sequence-region PYKB01000180.1 1 1420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000180.1 Genbank region 1 1420 . + . ID=PYKB01000180.1:1..1420;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000180.1 Genbank gene 1 1179 . + . ID=gene-C9F09_02020;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=C9F09_02020;partial=true;start_range=.,1 PYKB01000180.1 Protein Homology CDS 1 1179 . + 0 ID=cds-TGD03833.1;Parent=gene-C9F09_02020;Dbxref=NCBI_GP:TGD03833.1;Name=TGD03833.1;gbkey=CDS;gene=fumC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=C9F09_02020;partial=true;product=class II fumarate hydratase;protein_id=TGD03833.1;start_range=.,1;transl_table=11 PYKB01000180.1 Genbank gene 1176 1420 . - . ID=gene-C9F09_02025;Name=C9F09_02025;end_range=1420,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_02025;partial=true PYKB01000180.1 Protein Homology CDS 1176 1420 . - 2 ID=cds-TGD03834.1;Parent=gene-C9F09_02025;Dbxref=NCBI_GP:TGD03834.1;Name=TGD03834.1;Note=binds to DNA replication terminator sequences to prevent passage of replication forks;end_range=1420,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456062.1;locus_tag=C9F09_02025;partial=true;product=DNA replication terminus site-binding protein;protein_id=TGD03834.1;transl_table=11 ##sequence-region PYKB01000752.1 1 1392 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000752.1 Genbank region 1 1392 . + . ID=PYKB01000752.1:1..1392;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000752.1 Genbank gene 53 550 . - . ID=gene-C9F09_11620;Name=C9F09_11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11620 PYKB01000752.1 Protein Homology CDS 53 550 . - 0 ID=cds-TGC92905.1;Parent=gene-C9F09_11620;Dbxref=NCBI_GP:TGC92905.1;Name=TGC92905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457610.1;locus_tag=C9F09_11620;product=M48 family peptidase;protein_id=TGC92905.1;transl_table=11 PYKB01000752.1 Genbank gene 636 1392 . + . ID=gene-C9F09_11625;Name=C9F09_11625;end_range=1392,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_11625;partial=true PYKB01000752.1 Protein Homology CDS 636 1392 . + 0 ID=cds-TGC92906.1;Parent=gene-C9F09_11625;Dbxref=NCBI_GP:TGC92906.1;Name=TGC92906.1;end_range=1392,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=C9F09_11625;partial=true;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=TGC92906.1;transl_table=11 ##sequence-region PYKB01001045.1 1 7991 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01001045.1 Genbank region 1 7991 . + . ID=PYKB01001045.1:1..7991;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01001045.1 Genbank gene 1 1968 . - . ID=gene-C9F09_17545;Name=C9F09_17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17545;partial=true;start_range=.,1 PYKB01001045.1 Protein Homology CDS 1 1968 . - 0 ID=cds-TGC87180.1;Parent=gene-C9F09_17545;Dbxref=NCBI_GP:TGC87180.1;Name=TGC87180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457812.1;locus_tag=C9F09_17545;partial=true;product=class I adenylate cyclase;protein_id=TGC87180.1;start_range=.,1;transl_table=11 PYKB01001045.1 Genbank gene 2345 3286 . + . ID=gene-C9F09_17550;Name=C9F09_17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17550 PYKB01001045.1 Protein Homology CDS 2345 3286 . + 0 ID=cds-TGC87181.1;Parent=gene-C9F09_17550;Dbxref=NCBI_GP:TGC87181.1;Name=TGC87181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457813.1;locus_tag=C9F09_17550;product=hydroxymethylbilane synthase;protein_id=TGC87181.1;transl_table=11 PYKB01001045.1 Genbank gene 3283 4023 . + . ID=gene-C9F09_17555;Name=C9F09_17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17555 PYKB01001045.1 Protein Homology CDS 3283 4023 . + 0 ID=cds-TGC87182.1;Parent=gene-C9F09_17555;Dbxref=NCBI_GP:TGC87182.1;Name=TGC87182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=C9F09_17555;product=uroporphyrinogen-III synthase;protein_id=TGC87182.1;transl_table=11 PYKB01001045.1 Genbank gene 4045 5214 . + . ID=gene-C9F09_17560;Name=C9F09_17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17560 PYKB01001045.1 Protein Homology CDS 4045 5214 . + 0 ID=cds-TGC87183.1;Parent=gene-C9F09_17560;Dbxref=NCBI_GP:TGC87183.1;Name=TGC87183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=C9F09_17560;product=uroporphyrinogen-III C-methyltransferase;protein_id=TGC87183.1;transl_table=11 PYKB01001045.1 Genbank gene 5217 6413 . + . ID=gene-C9F09_17565;Name=C9F09_17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17565 PYKB01001045.1 Protein Homology CDS 5217 6413 . + 0 ID=cds-TGC87184.1;Parent=gene-C9F09_17565;Dbxref=NCBI_GP:TGC87184.1;Name=TGC87184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=C9F09_17565;product=protoheme IX biogenesis protein HemY;protein_id=TGC87184.1;transl_table=11 PYKB01001045.1 Genbank gene 6995 7071 . - . ID=gene-C9F09_17570;Name=C9F09_17570;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_17570 PYKB01001045.1 tRNAscan-SE tRNA 6995 7071 . - . ID=rna-C9F09_17570;Parent=gene-C9F09_17570;anticodon=(pos:complement(7035..7037));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_17570;product=tRNA-Pro PYKB01001045.1 tRNAscan-SE exon 6995 7071 . - . ID=exon-C9F09_17570-1;Parent=rna-C9F09_17570;anticodon=(pos:complement(7035..7037));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_17570;product=tRNA-Pro PYKB01001045.1 Genbank gene 7114 7200 . - . ID=gene-C9F09_17575;Name=C9F09_17575;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_17575 PYKB01001045.1 tRNAscan-SE tRNA 7114 7200 . - . ID=rna-C9F09_17575;Parent=gene-C9F09_17575;anticodon=(pos:complement(7164..7166));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_17575;product=tRNA-Leu PYKB01001045.1 tRNAscan-SE exon 7114 7200 . - . ID=exon-C9F09_17575-1;Parent=rna-C9F09_17575;anticodon=(pos:complement(7164..7166));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_17575;product=tRNA-Leu PYKB01001045.1 Genbank gene 7391 7991 . - . ID=gene-C9F09_17580;Name=C9F09_17580;end_range=7991,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_17580;partial=true PYKB01001045.1 Protein Homology CDS 7391 7991 . - 1 ID=cds-TGC87185.1;Parent=gene-C9F09_17580;Dbxref=NCBI_GP:TGC87185.1;Name=TGC87185.1;end_range=7991,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=C9F09_17580;partial=true;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=TGC87185.1;transl_table=11 ##sequence-region PYKB01000495.1 1 16435 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1960126 PYKB01000495.1 Genbank region 1 16435 . + . ID=PYKB01000495.1:1..16435;Dbxref=taxon:1960126;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Wilhelmsburg;strain=35dea PYKB01000495.1 Genbank gene 1 143 . + . ID=gene-C9F09_06235;Name=C9F09_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06235;partial=true;start_range=.,1 PYKB01000495.1 Protein Homology CDS 1 143 . + 2 ID=cds-TGC97781.1;Parent=gene-C9F09_06235;Dbxref=NCBI_GP:TGC97781.1;Name=TGC97781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455742.1;locus_tag=C9F09_06235;partial=true;product=hypothetical protein;protein_id=TGC97781.1;start_range=.,1;transl_table=11 PYKB01000495.1 Genbank gene 185 349 . - . ID=gene-C9F09_06240;Name=C9F09_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06240 PYKB01000495.1 Protein Homology CDS 185 349 . - 0 ID=cds-TGC97782.1;Parent=gene-C9F09_06240;Dbxref=NCBI_GP:TGC97782.1;Name=TGC97782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991981.1;locus_tag=C9F09_06240;product=hypothetical protein;protein_id=TGC97782.1;transl_table=11 PYKB01000495.1 Genbank gene 385 1914 . + . ID=gene-C9F09_06245;Name=C9F09_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06245 PYKB01000495.1 Protein Homology CDS 385 1914 . + 0 ID=cds-TGC97783.1;Parent=gene-C9F09_06245;Dbxref=NCBI_GP:TGC97783.1;Name=TGC97783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=C9F09_06245;product=hypothetical protein;protein_id=TGC97783.1;transl_table=11 PYKB01000495.1 Genbank gene 2017 2147 . - . ID=gene-C9F09_06250;Name=C9F09_06250;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F09_06250 PYKB01000495.1 cmsearch ncRNA 2017 2147 . - . ID=rna-C9F09_06250;Parent=gene-C9F09_06250;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_06250;product=RtT sRNA PYKB01000495.1 cmsearch exon 2017 2147 . - . ID=exon-C9F09_06250-1;Parent=rna-C9F09_06250;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_06250;product=RtT sRNA PYKB01000495.1 Genbank gene 2191 2275 . - . ID=gene-C9F09_06255;Name=C9F09_06255;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F09_06255 PYKB01000495.1 tRNAscan-SE tRNA 2191 2275 . - . ID=rna-C9F09_06255;Parent=gene-C9F09_06255;anticodon=(pos:complement(2239..2241));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_06255;product=tRNA-Tyr PYKB01000495.1 tRNAscan-SE exon 2191 2275 . - . ID=exon-C9F09_06255-1;Parent=rna-C9F09_06255;anticodon=(pos:complement(2239..2241));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F09_06255;product=tRNA-Tyr PYKB01000495.1 Genbank gene 2304 2445 . - . ID=gene-C9F09_06260;Name=C9F09_06260;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F09_06260 PYKB01000495.1 cmsearch ncRNA 2304 2445 . - . ID=rna-C9F09_06260;Parent=gene-C9F09_06260;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_06260;product=RtT sRNA PYKB01000495.1 cmsearch exon 2304 2445 . - . ID=exon-C9F09_06260-1;Parent=rna-C9F09_06260;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F09_06260;product=RtT sRNA PYKB01000495.1 Genbank gene 2616 3458 . - . ID=gene-C9F09_06265;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=C9F09_06265 PYKB01000495.1 Protein Homology CDS 2616 3458 . - 0 ID=cds-TGC97784.1;Parent=gene-C9F09_06265;Dbxref=NCBI_GP:TGC97784.1;Name=TGC97784.1;gbkey=CDS;gene=purU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=C9F09_06265;product=formyltetrahydrofolate deformylase;protein_id=TGC97784.1;transl_table=11 PYKB01000495.1 Genbank gene 3509 3967 . - . ID=gene-C9F09_06270;Name=C9F09_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06270 PYKB01000495.1 Protein Homology CDS 3509 3967 . - 0 ID=cds-TGC97785.1;Parent=gene-C9F09_06270;Dbxref=NCBI_GP:TGC97785.1;Name=TGC97785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=C9F09_06270;product=hypothetical protein;protein_id=TGC97785.1;transl_table=11 PYKB01000495.1 Genbank gene 4078 4983 . + . ID=gene-C9F09_06275;Name=C9F09_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06275 PYKB01000495.1 Protein Homology CDS 4078 4983 . + 0 ID=cds-TGC97786.1;Parent=gene-C9F09_06275;Dbxref=NCBI_GP:TGC97786.1;Name=TGC97786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=C9F09_06275;product=patatin-like phospholipase RssA;protein_id=TGC97786.1;transl_table=11 PYKB01000495.1 Genbank gene 5074 6087 . + . ID=gene-C9F09_06280;Name=C9F09_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06280 PYKB01000495.1 Protein Homology CDS 5074 6087 . + 0 ID=cds-TGC97787.1;Parent=gene-C9F09_06280;Dbxref=NCBI_GP:TGC97787.1;Name=TGC97787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455747.1;locus_tag=C9F09_06280;product=two-component system response regulator RssB;protein_id=TGC97787.1;transl_table=11 PYKB01000495.1 Genbank gene 6290 7198 . + . ID=gene-C9F09_06285;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=C9F09_06285 PYKB01000495.1 Protein Homology CDS 6290 7198 . + 0 ID=cds-TGC97788.1;Parent=gene-C9F09_06285;Dbxref=NCBI_GP:TGC97788.1;Name=TGC97788.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455748.1;locus_tag=C9F09_06285;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=TGC97788.1;transl_table=11 PYKB01000495.1 Genbank gene 7330 7743 . - . ID=gene-C9F09_06290;Name=C9F09_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06290 PYKB01000495.1 Protein Homology CDS 7330 7743 . - 0 ID=cds-TGC97789.1;Parent=gene-C9F09_06290;Dbxref=NCBI_GP:TGC97789.1;Name=TGC97789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455749.1;locus_tag=C9F09_06290;product=DNA-binding transcriptional regulator H-NS;protein_id=TGC97789.1;transl_table=11 PYKB01000495.1 Genbank gene 8406 9023 . + . ID=gene-C9F09_06295;Name=C9F09_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06295 PYKB01000495.1 Protein Homology CDS 8406 9023 . + 0 ID=cds-TGC97790.1;Parent=gene-C9F09_06295;Dbxref=NCBI_GP:TGC97790.1;Name=TGC97790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455750.1;locus_tag=C9F09_06295;product=thymidine kinase;protein_id=TGC97790.1;transl_table=11 PYKB01000495.1 Genbank gene 9220 11898 . - . ID=gene-C9F09_06300;Name=C9F09_06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06300 PYKB01000495.1 Protein Homology CDS 9220 11898 . - 0 ID=cds-TGC97791.1;Parent=gene-C9F09_06300;Dbxref=NCBI_GP:TGC97791.1;Name=TGC97791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=C9F09_06300;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=TGC97791.1;transl_table=11 PYKB01000495.1 Genbank gene 12375 13022 . + . ID=gene-C9F09_06305;Name=C9F09_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06305 PYKB01000495.1 Protein Homology CDS 12375 13022 . + 0 ID=cds-TGC97792.1;Parent=gene-C9F09_06305;Dbxref=NCBI_GP:TGC97792.1;Name=TGC97792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455752.1;locus_tag=C9F09_06305;product=hypothetical protein;protein_id=TGC97792.1;transl_table=11 PYKB01000495.1 Genbank pseudogene 13405 13742 . - . ID=gene-C9F09_06310;Name=C9F09_06310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_06310;pseudo=true PYKB01000495.1 Protein Homology CDS 13405 13742 . - 0 ID=cds-C9F09_06310;Parent=gene-C9F09_06310;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448165.1;locus_tag=C9F09_06310;product=hypothetical protein;pseudo=true;transl_table=11 PYKB01000495.1 Genbank gene 13669 15417 . + . ID=gene-C9F09_06315;Name=C9F09_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F09_06315 PYKB01000495.1 Protein Homology CDS 13669 15417 . + 0 ID=cds-TGC97793.1;Parent=gene-C9F09_06315;Dbxref=NCBI_GP:TGC97793.1;Name=TGC97793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460705.3;locus_tag=C9F09_06315;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=TGC97793.1;transl_table=11 PYKB01000495.1 Genbank pseudogene 15539 16429 . + . ID=gene-C9F09_06320;Name=C9F09_06320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F09_06320;pseudo=true PYKB01000495.1 Protein Homology CDS 15539 16429 . + 0 ID=cds-C9F09_06320;Parent=gene-C9F09_06320;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=C9F09_06320;product=oligopeptide ABC transporter permease OppB;pseudo=true;transl_table=11 ###