##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM474587v1 #!genome-build-accession NCBI_Assembly:GCA_004745875.1 #!annotation-date 03/23/2018 18:31:16 #!annotation-source NCBI ##sequence-region PYKI01003275.1 1 1651 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003275.1 Genbank region 1 1651 . + . ID=PYKI01003275.1:1..1651;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003275.1 Genbank gene 1 470 . + . ID=gene-C9F07_32940;Name=C9F07_32940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32940;partial=true;start_range=.,1 PYKI01003275.1 Protein Homology CDS 1 470 . + 2 ID=cds-TGD36167.1;Parent=gene-C9F07_32940;Dbxref=NCBI_GP:TGD36167.1;Name=TGD36167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455065.1;locus_tag=C9F07_32940;partial=true;product=hypothetical protein;protein_id=TGD36167.1;start_range=.,1;transl_table=11 PYKI01003275.1 Genbank gene 520 616 . - . ID=gene-C9F07_32945;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=C9F07_32945 PYKI01003275.1 cmsearch SRP_RNA 520 616 . - . ID=rna-C9F07_32945;Parent=gene-C9F07_32945;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00169,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_32945;product=signal recognition particle sRNA small type PYKI01003275.1 cmsearch exon 520 616 . - . ID=exon-C9F07_32945-1;Parent=rna-C9F07_32945;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00169,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_32945;product=signal recognition particle sRNA small type PYKI01003275.1 Genbank gene 701 1090 . + . ID=gene-C9F07_32950;Name=C9F07_32950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32950 PYKI01003275.1 Protein Homology CDS 701 1090 . + 0 ID=cds-TGD36168.1;Parent=gene-C9F07_32950;Dbxref=NCBI_GP:TGD36168.1;Name=TGD36168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455064.1;locus_tag=C9F07_32950;product=methyltransferase;protein_id=TGD36168.1;transl_table=11 PYKI01003275.1 Genbank gene 1123 1651 . - . ID=gene-C9F07_32955;Name=C9F07_32955;end_range=1651,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32955;partial=true PYKI01003275.1 Protein Homology CDS 1123 1651 . - 1 ID=cds-TGD36169.1;Parent=gene-C9F07_32955;Dbxref=NCBI_GP:TGD36169.1;Name=TGD36169.1;end_range=1651,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455063.1;locus_tag=C9F07_32955;partial=true;product=hypothetical protein;protein_id=TGD36169.1;transl_table=11 ##sequence-region PYKI01000939.1 1 1648 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000939.1 Genbank region 1 1648 . + . ID=PYKI01000939.1:1..1648;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000939.1 Genbank pseudogene 68 1648 . - . ID=gene-C9F07_08560;Name=C9F07_08560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08560;pseudo=true PYKI01000939.1 Protein Homology CDS 68 1648 . - 0 ID=cds-C9F07_08560;Parent=gene-C9F07_08560;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=C9F07_08560;product=glutamate synthase large subunit;pseudo=true;transl_table=11 ##sequence-region PYKI01002569.1 1 1647 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002569.1 Genbank region 1 1647 . + . ID=PYKI01002569.1:1..1647;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002569.1 Genbank gene 1 1647 . + . ID=gene-C9F07_25495;Name=recB;end_range=1647,.;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=C9F07_25495;partial=true;start_range=.,1 PYKI01002569.1 Protein Homology CDS 1 1647 . + 2 ID=cds-TGD49806.1;Parent=gene-C9F07_25495;Dbxref=NCBI_GP:TGD49806.1;Name=TGD49806.1;end_range=1647,.;gbkey=CDS;gene=recB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457387.1;locus_tag=C9F07_25495;partial=true;product=exodeoxyribonuclease V subunit beta;protein_id=TGD49806.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002025.1 1 1646 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002025.1 Genbank region 1 1646 . + . ID=PYKI01002025.1:1..1646;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002025.1 Genbank pseudogene 1 1076 . - . ID=gene-C9F07_19540;Name=C9F07_19540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19540;pseudo=true PYKI01002025.1 Protein Homology CDS 1 1076 . - 0 ID=cds-C9F07_19540;Parent=gene-C9F07_19540;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001346886.1;locus_tag=C9F07_19540;product=putrescine/spermidine ABC transporter;pseudo=true;transl_table=11 PYKI01002025.1 Genbank gene 1138 1200 . - . ID=gene-C9F07_19545;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=C9F07_19545 PYKI01002025.1 Protein Homology CDS 1138 1200 . - 0 ID=cds-TGD60053.1;Parent=gene-C9F07_19545;Dbxref=NCBI_GP:TGD60053.1;Name=TGD60053.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=C9F07_19545;product=membrane protein YoeI;protein_id=TGD60053.1;transl_table=11 PYKI01002025.1 Genbank gene 1434 1646 . - . ID=gene-C9F07_19550;Name=C9F07_19550;end_range=1646,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19550;partial=true PYKI01002025.1 Protein Homology CDS 1434 1646 . - 0 ID=cds-TGD60052.1;Parent=gene-C9F07_19550;Dbxref=NCBI_GP:TGD60052.1;Name=TGD60052.1;end_range=1646,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456616.1;locus_tag=C9F07_19550;partial=true;product=LysR family transcriptional regulator;protein_id=TGD60052.1;transl_table=11 ##sequence-region PYKI01000465.1 1 1645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000465.1 Genbank region 1 1645 . + . ID=PYKI01000465.1:1..1645;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000465.1 Genbank gene 521 736 . + . ID=gene-C9F07_03655;Name=C9F07_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03655 PYKI01000465.1 Protein Homology CDS 521 736 . + 0 ID=cds-TGE19763.1;Parent=gene-C9F07_03655;Dbxref=NCBI_GP:TGE19763.1;Name=TGE19763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455926.1;locus_tag=C9F07_03655;product=protein bdm;protein_id=TGE19763.1;transl_table=11 PYKI01000465.1 Genbank gene 831 974 . + . ID=gene-C9F07_03660;Name=C9F07_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03660 PYKI01000465.1 Protein Homology CDS 831 974 . + 0 ID=cds-TGE19764.1;Parent=gene-C9F07_03660;Dbxref=NCBI_GP:TGE19764.1;Name=TGE19764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455925.1;locus_tag=C9F07_03660;product=stationary-phase-induced ribosome-associated protein;protein_id=TGE19764.1;transl_table=11 PYKI01000465.1 Genbank gene 1151 1645 . + . ID=gene-C9F07_03665;Name=C9F07_03665;end_range=1645,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03665;partial=true PYKI01000465.1 Protein Homology CDS 1151 1645 . + 0 ID=cds-TGE19765.1;Parent=gene-C9F07_03665;Dbxref=NCBI_GP:TGE19765.1;Name=TGE19765.1;end_range=1645,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=C9F07_03665;partial=true;product=NAD-dependent malic enzyme;protein_id=TGE19765.1;transl_table=11 ##sequence-region PYKI01001968.1 1 1645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001968.1 Genbank region 1 1645 . + . ID=PYKI01001968.1:1..1645;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001968.1 Genbank gene 1 1645 . + . ID=gene-C9F07_18975;Name=C9F07_18975;end_range=1645,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18975;partial=true;start_range=.,1 PYKI01001968.1 Protein Homology CDS 1 1645 . + 0 ID=cds-TGD60331.1;Parent=gene-C9F07_18975;Dbxref=NCBI_GP:TGD60331.1;Name=TGD60331.1;end_range=1645,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=C9F07_18975;partial=true;product=chromosome partition protein MukB;protein_id=TGD60331.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002196.1 1 1643 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002196.1 Genbank region 1 1643 . + . ID=PYKI01002196.1:1..1643;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002196.1 Genbank gene 1 97 . + . ID=gene-C9F07_21345;Name=C9F07_21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21345;partial=true;start_range=.,1 PYKI01002196.1 Protein Homology CDS 1 97 . + 1 ID=cds-TGD56599.1;Parent=gene-C9F07_21345;Dbxref=NCBI_GP:TGD56599.1;Name=TGD56599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455305.1;locus_tag=C9F07_21345;partial=true;product=peptidoglycan-associated outer membrane lipoprotein;protein_id=TGD56599.1;start_range=.,1;transl_table=11 PYKI01002196.1 Genbank gene 107 895 . + . ID=gene-C9F07_21350;Name=C9F07_21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21350 PYKI01002196.1 Protein Homology CDS 107 895 . + 0 ID=cds-TGD56600.1;Parent=gene-C9F07_21350;Dbxref=NCBI_GP:TGD56600.1;Name=TGD56600.1;Note=periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455306.1;locus_tag=C9F07_21350;product=cell division protein CpoB;protein_id=TGD56600.1;transl_table=11 PYKI01002196.1 Genbank gene 1060 1135 . + . ID=gene-C9F07_21355;Name=C9F07_21355;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_21355 PYKI01002196.1 tRNAscan-SE tRNA 1060 1135 . + . ID=rna-C9F07_21355;Parent=gene-C9F07_21355;anticodon=(pos:1093..1095);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_21355;product=tRNA-Lys PYKI01002196.1 tRNAscan-SE exon 1060 1135 . + . ID=exon-C9F07_21355-1;Parent=rna-C9F07_21355;anticodon=(pos:1093..1095);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_21355;product=tRNA-Lys PYKI01002196.1 Genbank gene 1273 1348 . + . ID=gene-C9F07_21360;Name=C9F07_21360;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_21360 PYKI01002196.1 tRNAscan-SE tRNA 1273 1348 . + . ID=rna-C9F07_21360;Parent=gene-C9F07_21360;anticodon=(pos:1306..1308);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_21360;product=tRNA-Val PYKI01002196.1 tRNAscan-SE exon 1273 1348 . + . ID=exon-C9F07_21360-1;Parent=rna-C9F07_21360;anticodon=(pos:1306..1308);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_21360;product=tRNA-Val PYKI01002196.1 Genbank gene 1353 1428 . + . ID=gene-C9F07_21365;Name=C9F07_21365;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_21365 PYKI01002196.1 tRNAscan-SE tRNA 1353 1428 . + . ID=rna-C9F07_21365;Parent=gene-C9F07_21365;anticodon=(pos:1386..1388);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_21365;product=tRNA-Lys PYKI01002196.1 tRNAscan-SE exon 1353 1428 . + . ID=exon-C9F07_21365-1;Parent=rna-C9F07_21365;anticodon=(pos:1386..1388);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_21365;product=tRNA-Lys PYKI01002196.1 Genbank gene 1568 1643 . + . ID=gene-C9F07_21370;Name=C9F07_21370;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_21370 PYKI01002196.1 tRNAscan-SE tRNA 1568 1643 . + . ID=rna-C9F07_21370;Parent=gene-C9F07_21370;anticodon=(pos:1601..1603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_21370;product=tRNA-Lys PYKI01002196.1 tRNAscan-SE exon 1568 1643 . + . ID=exon-C9F07_21370-1;Parent=rna-C9F07_21370;anticodon=(pos:1601..1603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_21370;product=tRNA-Lys ##sequence-region PYKI01002831.1 1 1643 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002831.1 Genbank region 1 1643 . + . ID=PYKI01002831.1:1..1643;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002831.1 Genbank gene 1 1068 . - . ID=gene-C9F07_28320;Name=C9F07_28320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28320;partial=true;start_range=.,1 PYKI01002831.1 Protein Homology CDS 1 1068 . - 0 ID=cds-TGD45595.1;Parent=gene-C9F07_28320;Dbxref=NCBI_GP:TGD45595.1;Name=TGD45595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455980.1;locus_tag=C9F07_28320;partial=true;product=dimethyl sulfoxide reductase subunit A;protein_id=TGD45595.1;start_range=.,1;transl_table=11 PYKI01002831.1 Genbank gene 1225 1533 . - . ID=gene-C9F07_28325;Name=C9F07_28325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28325 PYKI01002831.1 Protein Homology CDS 1225 1533 . - 0 ID=cds-TGD45596.1;Parent=gene-C9F07_28325;Dbxref=NCBI_GP:TGD45596.1;Name=TGD45596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=C9F07_28325;product=DUF1161 domain-containing protein;protein_id=TGD45596.1;transl_table=11 ##sequence-region PYKI01000524.1 1 1642 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000524.1 Genbank region 1 1642 . + . ID=PYKI01000524.1:1..1642;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000524.1 Genbank pseudogene 61 597 . + . ID=gene-C9F07_04345;Name=C9F07_04345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04345;pseudo=true PYKI01000524.1 Protein Homology CDS 61 597 . + 0 ID=cds-C9F07_04345;Parent=gene-C9F07_04345;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455951.1;locus_tag=C9F07_04345;product=hydrogenase-1 operon protein HyaF2;pseudo=true;transl_table=11 PYKI01000524.1 Genbank gene 585 1472 . + . ID=gene-C9F07_04350;Name=C9F07_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04350 PYKI01000524.1 Protein Homology CDS 585 1472 . + 0 ID=cds-TGE16218.1;Parent=gene-C9F07_04350;Dbxref=NCBI_GP:TGE16218.1;Name=TGE16218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=C9F07_04350;product=ATP/GTP-binding protein;protein_id=TGE16218.1;transl_table=11 ##sequence-region PYKI01000445.1 1 1640 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000445.1 Genbank region 1 1640 . + . ID=PYKI01000445.1:1..1640;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000445.1 Genbank pseudogene 20 382 . - . ID=gene-C9F07_03440;Name=C9F07_03440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03440;pseudo=true PYKI01000445.1 Protein Homology CDS 20 382 . - 0 ID=cds-C9F07_03440;Parent=gene-C9F07_03440;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455389.1;locus_tag=C9F07_03440;product=glutathione S-transferase;pseudo=true;transl_table=11 PYKI01000445.1 Genbank gene 626 1640 . + . ID=gene-C9F07_03445;Name=C9F07_03445;end_range=1640,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03445;partial=true PYKI01000445.1 Protein Homology CDS 626 1640 . + 0 ID=cds-TGE20250.1;Parent=gene-C9F07_03445;Dbxref=NCBI_GP:TGE20250.1;Name=TGE20250.1;end_range=1640,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455390.1;locus_tag=C9F07_03445;partial=true;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=TGE20250.1;transl_table=11 ##sequence-region PYKI01001513.1 1 1639 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001513.1 Genbank region 1 1639 . + . ID=PYKI01001513.1:1..1639;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001513.1 Genbank gene 1 441 . - . ID=gene-C9F07_14430;Name=C9F07_14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14430;partial=true;start_range=.,1 PYKI01001513.1 Protein Homology CDS 1 441 . - 0 ID=cds-TGD77027.1;Parent=gene-C9F07_14430;Dbxref=NCBI_GP:TGD77027.1;Name=TGD77027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458242.1;locus_tag=C9F07_14430;partial=true;product=glutathione S-transferase;protein_id=TGD77027.1;start_range=.,1;transl_table=11 PYKI01001513.1 Genbank gene 917 1639 . + . ID=gene-C9F07_14435;Name=C9F07_14435;end_range=1639,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14435;partial=true PYKI01001513.1 Protein Homology CDS 917 1639 . + 0 ID=cds-TGD77028.1;Parent=gene-C9F07_14435;Dbxref=NCBI_GP:TGD77028.1;Name=TGD77028.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate;end_range=1639,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458241.1;locus_tag=C9F07_14435;partial=true;product=PTS mannitol transporter subunit IICBA;protein_id=TGD77028.1;transl_table=11 ##sequence-region PYKI01002385.1 1 1637 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002385.1 Genbank region 1 1637 . + . ID=PYKI01002385.1:1..1637;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002385.1 Genbank gene 1 272 . + . ID=gene-C9F07_23450;Name=C9F07_23450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23450;partial=true;start_range=.,1 PYKI01002385.1 Protein Homology CDS 1 272 . + 2 ID=cds-TGD52293.1;Parent=gene-C9F07_23450;Dbxref=NCBI_GP:TGD52293.1;Name=TGD52293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458163.1;locus_tag=C9F07_23450;partial=true;product=PTS sugar transporter;protein_id=TGD52293.1;start_range=.,1;transl_table=11 PYKI01002385.1 Genbank gene 418 1167 . + . ID=gene-C9F07_23455;Name=C9F07_23455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23455 PYKI01002385.1 Protein Homology CDS 418 1167 . + 0 ID=cds-TGD52294.1;Parent=gene-C9F07_23455;Dbxref=NCBI_GP:TGD52294.1;Name=TGD52294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458164.1;locus_tag=C9F07_23455;product=PTS sugar transporter subunit IIC;protein_id=TGD52294.1;transl_table=11 PYKI01002385.1 Genbank gene 1164 1637 . + . ID=gene-C9F07_23460;Name=C9F07_23460;end_range=1637,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23460;partial=true PYKI01002385.1 Protein Homology CDS 1164 1637 . + 0 ID=cds-TGD52295.1;Parent=gene-C9F07_23460;Dbxref=NCBI_GP:TGD52295.1;Name=TGD52295.1;end_range=1637,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=C9F07_23460;partial=true;product=PTS fructose transporter subunit IID;protein_id=TGD52295.1;transl_table=11 ##sequence-region PYKI01001328.1 1 1636 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001328.1 Genbank region 1 1636 . + . ID=PYKI01001328.1:1..1636;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001328.1 Genbank pseudogene 1 713 . + . ID=gene-C9F07_12420;Name=C9F07_12420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12420;pseudo=true PYKI01001328.1 Protein Homology CDS 1 713 . + 2 ID=cds-C9F07_12420;Parent=gene-C9F07_12420;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456759.1;locus_tag=C9F07_12420;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 PYKI01001328.1 Genbank pseudogene 903 1636 . + . ID=gene-C9F07_12425;Name=C9F07_12425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12425;pseudo=true PYKI01001328.1 Protein Homology CDS 903 1636 . + 0 ID=cds-C9F07_12425;Parent=gene-C9F07_12425;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=C9F07_12425;product=lysine transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01001621.1 1 1634 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001621.1 Genbank region 1 1634 . + . ID=PYKI01001621.1:1..1634;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001621.1 Genbank gene 1 412 . - . ID=gene-C9F07_15460;Name=C9F07_15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15460;partial=true;start_range=.,1 PYKI01001621.1 Protein Homology CDS 1 412 . - 0 ID=cds-TGD70677.1;Parent=gene-C9F07_15460;Dbxref=NCBI_GP:TGD70677.1;Name=TGD70677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=C9F07_15460;partial=true;product=transcriptional regulator;protein_id=TGD70677.1;start_range=.,1;transl_table=11 PYKI01001621.1 Genbank gene 877 1634 . - . ID=gene-C9F07_15465;Name=C9F07_15465;end_range=1634,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15465;partial=true PYKI01001621.1 Protein Homology CDS 877 1634 . - 2 ID=cds-TGD70678.1;Parent=gene-C9F07_15465;Dbxref=NCBI_GP:TGD70678.1;Name=TGD70678.1;end_range=1634,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441349.1;locus_tag=C9F07_15465;partial=true;product=diguanylate cyclase;protein_id=TGD70678.1;transl_table=11 ##sequence-region PYKI01002192.1 1 1633 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002192.1 Genbank region 1 1633 . + . ID=PYKI01002192.1:1..1633;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002192.1 Genbank gene 1 1122 . + . ID=gene-C9F07_21315;Name=C9F07_21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21315;partial=true;start_range=.,1 PYKI01002192.1 Protein Homology CDS 1 1122 . + 0 ID=cds-TGD56608.1;Parent=gene-C9F07_21315;Dbxref=NCBI_GP:TGD56608.1;Name=TGD56608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458593.1;locus_tag=C9F07_21315;partial=true;product=arginine/agmatine antiporter;protein_id=TGD56608.1;start_range=.,1;transl_table=11 PYKI01002192.1 Genbank gene 1256 1633 . + . ID=gene-C9F07_21320;Name=C9F07_21320;end_range=1633,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21320;partial=true PYKI01002192.1 Protein Homology CDS 1256 1633 . + 0 ID=cds-TGD56609.1;Parent=gene-C9F07_21320;Dbxref=NCBI_GP:TGD56609.1;Name=TGD56609.1;end_range=1633,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=C9F07_21320;partial=true;product=phosphoethanolamine transferase EptA;protein_id=TGD56609.1;transl_table=11 ##sequence-region PYKI01002548.1 1 1624 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002548.1 Genbank region 1 1624 . + . ID=PYKI01002548.1:1..1624;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002548.1 Genbank gene 96 449 . + . ID=gene-C9F07_25280;Name=C9F07_25280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25280 PYKI01002548.1 Protein Homology CDS 96 449 . + 0 ID=cds-TGD49943.1;Parent=gene-C9F07_25280;Dbxref=NCBI_GP:TGD49943.1;Name=TGD49943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=C9F07_25280;product=hypothetical protein;protein_id=TGD49943.1;transl_table=11 PYKI01002548.1 Genbank gene 507 626 . + . ID=gene-C9F07_25285;Name=C9F07_25285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25285 PYKI01002548.1 Protein Homology CDS 507 626 . + 0 ID=cds-TGD49944.1;Parent=gene-C9F07_25285;Dbxref=NCBI_GP:TGD49944.1;Name=TGD49944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460829.1;locus_tag=C9F07_25285;product=hypothetical protein;protein_id=TGD49944.1;transl_table=11 PYKI01002548.1 Genbank gene 706 894 . + . ID=gene-C9F07_25290;Name=C9F07_25290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25290 PYKI01002548.1 Protein Homology CDS 706 894 . + 0 ID=cds-TGD49946.1;Parent=gene-C9F07_25290;Dbxref=NCBI_GP:TGD49946.1;Name=TGD49946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001674912.1;locus_tag=C9F07_25290;product=hypothetical protein;protein_id=TGD49946.1;transl_table=11 PYKI01002548.1 Genbank gene 832 1624 . - . ID=gene-C9F07_25295;Name=C9F07_25295;end_range=1624,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25295;partial=true PYKI01002548.1 Protein Homology CDS 832 1624 . - 1 ID=cds-TGD49945.1;Parent=gene-C9F07_25295;Dbxref=NCBI_GP:TGD49945.1;Name=TGD49945.1;end_range=1624,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=C9F07_25295;partial=true;product=integrase;protein_id=TGD49945.1;transl_table=11 ##sequence-region PYKI01002215.1 1 1623 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002215.1 Genbank region 1 1623 . + . ID=PYKI01002215.1:1..1623;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002215.1 Genbank gene 1 121 . - . ID=gene-C9F07_21590;Name=C9F07_21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21590;partial=true;start_range=.,1 PYKI01002215.1 Protein Homology CDS 1 121 . - 0 ID=cds-TGD56478.1;Parent=gene-C9F07_21590;Dbxref=NCBI_GP:TGD56478.1;Name=TGD56478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457838.1;locus_tag=C9F07_21590;partial=true;product=peptidylprolyl isomerase C;protein_id=TGD56478.1;start_range=.,1;transl_table=11 PYKI01002215.1 Genbank gene 225 473 . + . ID=gene-C9F07_21595;Name=C9F07_21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21595 PYKI01002215.1 Protein Homology CDS 225 473 . + 0 ID=cds-TGD56479.1;Parent=gene-C9F07_21595;Dbxref=NCBI_GP:TGD56479.1;Name=TGD56479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675061.1;locus_tag=C9F07_21595;product=cyclic nucleotide-binding protein;protein_id=TGD56479.1;transl_table=11 PYKI01002215.1 Genbank gene 410 559 . + . ID=gene-C9F07_21600;Name=C9F07_21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21600 PYKI01002215.1 Protein Homology CDS 410 559 . + 0 ID=cds-TGD56481.1;Parent=gene-C9F07_21600;Dbxref=NCBI_GP:TGD56481.1;Name=TGD56481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462802.1;locus_tag=C9F07_21600;product=hypothetical protein;protein_id=TGD56481.1;transl_table=11 PYKI01002215.1 Genbank gene 659 1623 . + . ID=gene-C9F07_21605;Name=C9F07_21605;end_range=1623,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21605;partial=true PYKI01002215.1 Protein Homology CDS 659 1623 . + 0 ID=cds-TGD56480.1;Parent=gene-C9F07_21605;Dbxref=NCBI_GP:TGD56480.1;Name=TGD56480.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;end_range=1623,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457834.1;locus_tag=C9F07_21605;partial=true;product=ATP-dependent DNA helicase Rep;protein_id=TGD56480.1;transl_table=11 ##sequence-region PYKI01002630.1 1 1622 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002630.1 Genbank region 1 1622 . + . ID=PYKI01002630.1:1..1622;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002630.1 Genbank pseudogene 113 682 . + . ID=gene-C9F07_26170;Name=C9F07_26170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26170;pseudo=true PYKI01002630.1 Protein Homology CDS 113 682 . + 0 ID=cds-C9F07_26170;Parent=gene-C9F07_26170;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455752.1;locus_tag=C9F07_26170;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002630.1 Genbank pseudogene 1066 1403 . - . ID=gene-C9F07_26175;Name=C9F07_26175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26175;pseudo=true PYKI01002630.1 Protein Homology CDS 1066 1403 . - 0 ID=cds-C9F07_26175;Parent=gene-C9F07_26175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448165.1;locus_tag=C9F07_26175;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002630.1 Genbank gene 1330 1622 . + . ID=gene-C9F07_26180;Name=C9F07_26180;end_range=1622,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26180;partial=true PYKI01002630.1 Protein Homology CDS 1330 1622 . + 0 ID=cds-TGD49460.1;Parent=gene-C9F07_26180;Dbxref=NCBI_GP:TGD49460.1;Name=TGD49460.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;end_range=1622,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460705.3;locus_tag=C9F07_26180;partial=true;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=TGD49460.1;transl_table=11 ##sequence-region PYKI01000435.1 1 1621 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000435.1 Genbank region 1 1621 . + . ID=PYKI01000435.1:1..1621;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000435.1 Genbank gene 1 695 . - . ID=gene-C9F07_03345;Name=C9F07_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03345;partial=true;start_range=.,1 PYKI01000435.1 Protein Homology CDS 1 695 . - 0 ID=cds-TGE20829.1;Parent=gene-C9F07_03345;Dbxref=NCBI_GP:TGE20829.1;Name=TGE20829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457076.1;locus_tag=C9F07_03345;partial=true;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=TGE20829.1;start_range=.,1;transl_table=11 PYKI01000435.1 Genbank gene 814 1621 . + . ID=gene-C9F07_03350;Name=C9F07_03350;end_range=1621,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03350;partial=true PYKI01000435.1 Protein Homology CDS 814 1621 . + 0 ID=cds-TGE20830.1;Parent=gene-C9F07_03350;Dbxref=NCBI_GP:TGE20830.1;Name=TGE20830.1;end_range=1621,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=C9F07_03350;partial=true;product=inositol-1-monophosphatase;protein_id=TGE20830.1;transl_table=11 ##sequence-region PYKI01001515.1 1 1620 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001515.1 Genbank region 1 1620 . + . ID=PYKI01001515.1:1..1620;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001515.1 Genbank gene 1 1620 . - . ID=gene-C9F07_14445;Name=C9F07_14445;end_range=1620,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14445;partial=true;start_range=.,1 PYKI01001515.1 Protein Homology CDS 1 1620 . - 2 ID=cds-TGD76812.1;Parent=gene-C9F07_14445;Dbxref=NCBI_GP:TGD76812.1;Name=TGD76812.1;end_range=1620,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455075.1;locus_tag=C9F07_14445;partial=true;product=mechanosensitive channel MscK;protein_id=TGD76812.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000828.1 1 4388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000828.1 Genbank region 1 4388 . + . ID=PYKI01000828.1:1..4388;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000828.1 Genbank gene 1 376 . + . ID=gene-C9F07_07545;Name=C9F07_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07545;partial=true;start_range=.,1 PYKI01000828.1 Protein Homology CDS 1 376 . + 1 ID=cds-TGE07229.1;Parent=gene-C9F07_07545;Dbxref=NCBI_GP:TGE07229.1;Name=TGE07229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457773.1;locus_tag=C9F07_07545;partial=true;product=hypothetical protein;protein_id=TGE07229.1;start_range=.,1;transl_table=11 PYKI01000828.1 Genbank gene 462 1163 . + . ID=gene-C9F07_07550;Name=C9F07_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07550 PYKI01000828.1 Protein Homology CDS 462 1163 . + 0 ID=cds-TGE07230.1;Parent=gene-C9F07_07550;Dbxref=NCBI_GP:TGE07230.1;Name=TGE07230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=C9F07_07550;product=NAD(P)H-flavin reductase;protein_id=TGE07230.1;transl_table=11 PYKI01000828.1 Genbank gene 1417 3240 . + . ID=gene-C9F07_07555;Name=C9F07_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07555 PYKI01000828.1 Protein Homology CDS 1417 3240 . + 0 ID=cds-TGE07231.1;Parent=gene-C9F07_07555;Dbxref=NCBI_GP:TGE07231.1;Name=TGE07231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457771.1;locus_tag=C9F07_07555;product=arylsulfatase;protein_id=TGE07231.1;transl_table=11 PYKI01000828.1 Genbank pseudogene 3437 4327 . - . ID=gene-C9F07_07560;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=pseudogene;locus_tag=C9F07_07560;pseudo=true PYKI01000828.1 Protein Homology CDS 3437 4327 . - 0 ID=cds-C9F07_07560;Parent=gene-C9F07_07560;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=fadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457770.1;locus_tag=C9F07_07560;product=acetyl-CoA C-acyltransferase FadA;pseudo=true;transl_table=11 ##sequence-region PYKI01001001.1 1 1617 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001001.1 Genbank region 1 1617 . + . ID=PYKI01001001.1:1..1617;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001001.1 Genbank gene 1 670 . - . ID=gene-C9F07_09170;Name=C9F07_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09170;partial=true;start_range=.,1 PYKI01001001.1 Protein Homology CDS 1 670 . - 0 ID=cds-TGD98519.1;Parent=gene-C9F07_09170;Dbxref=NCBI_GP:TGD98519.1;Name=TGD98519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=C9F07_09170;partial=true;product=RNA polymerase sigma factor RpoS;protein_id=TGD98519.1;start_range=.,1;transl_table=11 PYKI01001001.1 Genbank gene 733 1617 . - . ID=gene-C9F07_09175;Name=C9F07_09175;end_range=1617,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09175;partial=true PYKI01001001.1 Protein Homology CDS 733 1617 . - 0 ID=cds-TGD98520.1;Parent=gene-C9F07_09175;Dbxref=NCBI_GP:TGD98520.1;Name=TGD98520.1;end_range=1617,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457314.1;locus_tag=C9F07_09175;partial=true;product=murein hydrolase activator NlpD;protein_id=TGD98520.1;transl_table=11 ##sequence-region PYKI01003499.1 1 1614 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003499.1 Genbank region 1 1614 . + . ID=PYKI01003499.1:1..1614;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003499.1 Genbank gene 1 851 . - . ID=gene-C9F07_35215;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=C9F07_35215;partial=true;start_range=.,1 PYKI01003499.1 Protein Homology CDS 1 851 . - 0 ID=cds-TGD32152.1;Parent=gene-C9F07_35215;Dbxref=NCBI_GP:TGD32152.1;Name=TGD32152.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=C9F07_35215;partial=true;product=SPI-1 type III secretion system protein SpaO;protein_id=TGD32152.1;start_range=.,1;transl_table=11 PYKI01003499.1 Genbank pseudogene 851 1585 . - . ID=gene-C9F07_35220;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=pseudogene;locus_tag=C9F07_35220;pseudo=true PYKI01003499.1 Protein Homology CDS 851 1585 . - 0 ID=cds-C9F07_35220;Parent=gene-C9F07_35220;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457286.1;locus_tag=C9F07_35220;product=SPI-1 type III secretion system protein SpaN;pseudo=true;transl_table=11 ##sequence-region PYKI01002306.1 1 1613 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002306.1 Genbank region 1 1613 . + . ID=PYKI01002306.1:1..1613;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002306.1 Genbank gene 1 253 . - . ID=gene-C9F07_22605;Name=C9F07_22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22605;partial=true;start_range=.,1 PYKI01002306.1 Protein Homology CDS 1 253 . - 0 ID=cds-TGD54379.1;Parent=gene-C9F07_22605;Dbxref=NCBI_GP:TGD54379.1;Name=TGD54379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=C9F07_22605;partial=true;product=glutamate--cysteine ligase;protein_id=TGD54379.1;start_range=.,1;transl_table=11 PYKI01002306.1 Genbank gene 265 969 . - . ID=gene-C9F07_22610;Name=C9F07_22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22610 PYKI01002306.1 Protein Homology CDS 265 969 . - 0 ID=cds-TGD54380.1;Parent=gene-C9F07_22610;Dbxref=NCBI_GP:TGD54380.1;Name=TGD54380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455161.1;locus_tag=C9F07_22610;product=enterobactin synthase subunit EntD;protein_id=TGD54380.1;transl_table=11 PYKI01002306.1 Genbank gene 1016 1613 . - . ID=gene-C9F07_22615;Name=C9F07_22615;end_range=1613,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22615;partial=true PYKI01002306.1 Protein Homology CDS 1016 1613 . - 1 ID=cds-TGD54381.1;Parent=gene-C9F07_22615;Dbxref=NCBI_GP:TGD54381.1;Name=TGD54381.1;end_range=1613,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455162.1;locus_tag=C9F07_22615;partial=true;product=TonB-dependent siderophore receptor;protein_id=TGD54381.1;transl_table=11 ##sequence-region PYKI01001218.1 1 1613 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001218.1 Genbank region 1 1613 . + . ID=PYKI01001218.1:1..1613;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001218.1 Genbank pseudogene 69 1235 . - . ID=gene-C9F07_11395;Name=C9F07_11395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11395;pseudo=true PYKI01001218.1 Protein Homology CDS 69 1235 . - 0 ID=cds-C9F07_11395;Parent=gene-C9F07_11395;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=C9F07_11395;product=multidrug ABC transporter ATP-binding protein;pseudo=true;transl_table=11 PYKI01001218.1 Genbank gene 1228 1613 . - . ID=gene-C9F07_11400;Name=C9F07_11400;end_range=1613,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11400;partial=true PYKI01001218.1 Protein Homology CDS 1228 1613 . - 2 ID=cds-TGD91281.1;Parent=gene-C9F07_11400;Dbxref=NCBI_GP:TGD91281.1;Name=TGD91281.1;end_range=1613,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455356.1;locus_tag=C9F07_11400;partial=true;product=secretion protein HlyD;protein_id=TGD91281.1;transl_table=11 ##sequence-region PYKI01000499.1 1 1611 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000499.1 Genbank region 1 1611 . + . ID=PYKI01000499.1:1..1611;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000499.1 Genbank gene 1 353 . + . ID=gene-C9F07_04040;Name=C9F07_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04040;partial=true;start_range=.,1 PYKI01000499.1 Protein Homology CDS 1 353 . + 2 ID=cds-TGE17423.1;Parent=gene-C9F07_04040;Dbxref=NCBI_GP:TGE17423.1;Name=TGE17423.1;Note=involved in the transport of C4-dicarboxylates across the membrane;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458305.1;locus_tag=C9F07_04040;partial=true;product=C4-dicarboxylate transporter DctA;protein_id=TGE17423.1;start_range=.,1;transl_table=11 PYKI01000499.1 Genbank pseudogene 573 1611 . + . ID=gene-C9F07_04045;Name=C9F07_04045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04045;pseudo=true PYKI01000499.1 Protein Homology CDS 573 1611 . + 0 ID=cds-C9F07_04045;Parent=gene-C9F07_04045;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=C9F07_04045;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003065.1 1 1609 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003065.1 Genbank region 1 1609 . + . ID=PYKI01003065.1:1..1609;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003065.1 Genbank pseudogene 62 1609 . + . ID=gene-C9F07_30735;Name=C9F07_30735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30735;pseudo=true PYKI01003065.1 Protein Homology CDS 62 1609 . + 0 ID=cds-C9F07_30735;Parent=gene-C9F07_30735;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458384.1;locus_tag=C9F07_30735;product=glycogen phosphorylase;pseudo=true;transl_table=11 ##sequence-region PYKI01000860.1 1 1607 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000860.1 Genbank region 1 1607 . + . ID=PYKI01000860.1:1..1607;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000860.1 Genbank gene 1 420 . - . ID=gene-C9F07_07870;Name=C9F07_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07870;partial=true;start_range=.,1 PYKI01000860.1 Protein Homology CDS 1 420 . - 0 ID=cds-TGE05864.1;Parent=gene-C9F07_07870;Dbxref=NCBI_GP:TGE05864.1;Name=TGE05864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456836.1;locus_tag=C9F07_07870;partial=true;product=competence/damage-inducible protein A;protein_id=TGE05864.1;start_range=.,1;transl_table=11 PYKI01000860.1 Genbank gene 535 1182 . - . ID=gene-C9F07_07875;Name=C9F07_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07875 PYKI01000860.1 Protein Homology CDS 535 1182 . - 0 ID=cds-TGE05866.1;Parent=gene-C9F07_07875;Dbxref=NCBI_GP:TGE05866.1;Name=TGE05866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456837.1;locus_tag=C9F07_07875;product=porin;protein_id=TGE05866.1;transl_table=11 PYKI01000860.1 Genbank gene 1356 1607 . + . ID=gene-C9F07_07880;Name=C9F07_07880;end_range=1607,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07880;partial=true PYKI01000860.1 Protein Homology CDS 1356 1607 . + 0 ID=cds-TGE05865.1;Parent=gene-C9F07_07880;Dbxref=NCBI_GP:TGE05865.1;Name=TGE05865.1;end_range=1607,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456838.1;locus_tag=C9F07_07880;partial=true;product=nucleoside triphosphatase NudI;protein_id=TGE05865.1;transl_table=11 ##sequence-region PYKI01001469.1 1 1604 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001469.1 Genbank region 1 1604 . + . ID=PYKI01001469.1:1..1604;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001469.1 Genbank gene 325 1077 . - . ID=gene-C9F07_13925;Name=C9F07_13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13925 PYKI01001469.1 Protein Homology CDS 325 1077 . - 0 ID=cds-TGD81034.1;Parent=gene-C9F07_13925;Dbxref=NCBI_GP:TGD81034.1;Name=TGD81034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455242.1;locus_tag=C9F07_13925;product=UMP phosphatase;protein_id=TGD81034.1;transl_table=11 PYKI01001469.1 Genbank gene 1124 1604 . - . ID=gene-C9F07_13930;Name=C9F07_13930;end_range=1604,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13930;partial=true PYKI01001469.1 Protein Homology CDS 1124 1604 . - 1 ID=cds-TGD81035.1;Parent=gene-C9F07_13930;Dbxref=NCBI_GP:TGD81035.1;Name=TGD81035.1;end_range=1604,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455243.1;locus_tag=C9F07_13930;partial=true;product=transcriptional regulator;protein_id=TGD81035.1;transl_table=11 ##sequence-region PYKI01001649.1 1 1603 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001649.1 Genbank region 1 1603 . + . ID=PYKI01001649.1:1..1603;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001649.1 Genbank gene 1 327 . - . ID=gene-C9F07_15750;Name=C9F07_15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15750;partial=true;start_range=.,1 PYKI01001649.1 Protein Homology CDS 1 327 . - 0 ID=cds-TGD70268.1;Parent=gene-C9F07_15750;Dbxref=NCBI_GP:TGD70268.1;Name=TGD70268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=C9F07_15750;partial=true;product=N-hydroxyarylamine O-acetyltransferase;protein_id=TGD70268.1;start_range=.,1;transl_table=11 PYKI01001649.1 Genbank gene 611 1243 . - . ID=gene-C9F07_15755;Name=C9F07_15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15755 PYKI01001649.1 Protein Homology CDS 611 1243 . - 0 ID=cds-TGD70269.1;Parent=gene-C9F07_15755;Dbxref=NCBI_GP:TGD70269.1;Name=TGD70269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455913.1;locus_tag=C9F07_15755;product=effector protein steA;protein_id=TGD70269.1;transl_table=11 ##sequence-region PYKI01000886.1 1 1602 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000886.1 Genbank region 1 1602 . + . ID=PYKI01000886.1:1..1602;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000886.1 Genbank gene 1 614 . + . ID=gene-C9F07_08120;Name=C9F07_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08120;partial=true;start_range=.,1 PYKI01000886.1 Protein Homology CDS 1 614 . + 2 ID=cds-TGE03988.1;Parent=gene-C9F07_08120;Dbxref=NCBI_GP:TGE03988.1;Name=TGE03988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456891.1;locus_tag=C9F07_08120;partial=true;product=thiol:disulfide oxidoreductase;protein_id=TGE03988.1;start_range=.,1;transl_table=11 PYKI01000886.1 Genbank gene 740 1602 . + . ID=gene-C9F07_08125;Name=C9F07_08125;end_range=1602,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08125;partial=true PYKI01000886.1 Protein Homology CDS 740 1602 . + 0 ID=cds-TGE03989.1;Parent=gene-C9F07_08125;Dbxref=NCBI_GP:TGE03989.1;Name=TGE03989.1;end_range=1602,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=C9F07_08125;partial=true;product=TIGR01777 family protein;protein_id=TGE03989.1;transl_table=11 ##sequence-region PYKI01001630.1 1 4434 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001630.1 Genbank region 1 4434 . + . ID=PYKI01001630.1:1..4434;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001630.1 Genbank gene 254 439 . + . ID=gene-C9F07_15565;Name=C9F07_15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15565 PYKI01001630.1 Protein Homology CDS 254 439 . + 0 ID=cds-TGD70496.1;Parent=gene-C9F07_15565;Dbxref=NCBI_GP:TGD70496.1;Name=TGD70496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219418.1;locus_tag=C9F07_15565;product=hypothetical protein;protein_id=TGD70496.1;transl_table=11 PYKI01001630.1 Genbank pseudogene 489 2651 . - . ID=gene-C9F07_15570;Name=C9F07_15570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15570;pseudo=true PYKI01001630.1 Protein Homology CDS 489 2651 . - 0 ID=cds-C9F07_15570;Parent=gene-C9F07_15570;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=C9F07_15570;product=DNA helicase II;pseudo=true;transl_table=11 PYKI01001630.1 Genbank gene 2787 3503 . - . ID=gene-C9F07_15575;Name=C9F07_15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15575 PYKI01001630.1 Protein Homology CDS 2787 3503 . - 0 ID=cds-TGD70497.1;Parent=gene-C9F07_15575;Dbxref=NCBI_GP:TGD70497.1;Name=TGD70497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=C9F07_15575;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=TGD70497.1;transl_table=11 PYKI01001630.1 Genbank gene 3503 4405 . - . ID=gene-C9F07_15580;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=C9F07_15580 PYKI01001630.1 Protein Homology CDS 3503 4405 . - 0 ID=cds-TGD70498.1;Parent=gene-C9F07_15580;Dbxref=NCBI_GP:TGD70498.1;Name=TGD70498.1;gbkey=CDS;gene=xerC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133307.1;locus_tag=C9F07_15580;product=tyrosine recombinase XerC;protein_id=TGD70498.1;transl_table=11 ##sequence-region PYKI01003364.1 1 1601 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003364.1 Genbank region 1 1601 . + . ID=PYKI01003364.1:1..1601;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003364.1 Genbank gene 1 714 . - . ID=gene-C9F07_33875;Name=C9F07_33875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33875;partial=true;start_range=.,1 PYKI01003364.1 Protein Homology CDS 1 714 . - 0 ID=cds-TGD34719.1;Parent=gene-C9F07_33875;Dbxref=NCBI_GP:TGD34719.1;Name=TGD34719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=C9F07_33875;partial=true;product=hypothetical protein;protein_id=TGD34719.1;start_range=.,1;transl_table=11 PYKI01003364.1 Genbank pseudogene 748 1156 . - . ID=gene-C9F07_33880;Name=C9F07_33880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33880;pseudo=true PYKI01003364.1 Protein Homology CDS 748 1156 . - 0 ID=cds-C9F07_33880;Parent=gene-C9F07_33880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=C9F07_33880;product=Shiga toxin A subunit;pseudo=true;transl_table=11 PYKI01003364.1 Genbank gene 1125 1352 . + . ID=gene-C9F07_33885;Name=C9F07_33885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33885 PYKI01003364.1 Protein Homology CDS 1125 1352 . + 0 ID=cds-TGD34718.1;Parent=gene-C9F07_33885;Dbxref=NCBI_GP:TGD34718.1;Name=TGD34718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478351.1;locus_tag=C9F07_33885;product=hypothetical protein;protein_id=TGD34718.1;transl_table=11 PYKI01003364.1 Genbank pseudogene 1359 1550 . - . ID=gene-C9F07_33890;Name=C9F07_33890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33890;pseudo=true PYKI01003364.1 Protein Homology CDS 1359 1550 . - 0 ID=cds-C9F07_33890;Parent=gene-C9F07_33890;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=C9F07_33890;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003497.1 1 1601 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003497.1 Genbank region 1 1601 . + . ID=PYKI01003497.1:1..1601;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003497.1 Genbank gene 1 776 . + . ID=gene-C9F07_35195;Name=C9F07_35195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35195;partial=true;start_range=.,1 PYKI01003497.1 Protein Homology CDS 1 776 . + 2 ID=cds-TGD32162.1;Parent=gene-C9F07_35195;Dbxref=NCBI_GP:TGD32162.1;Name=TGD32162.1;Note=FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456920.1;locus_tag=C9F07_35195;partial=true;product=beta-ketoacyl-[acyl-carrier-protein] synthase I;protein_id=TGD32162.1;start_range=.,1;transl_table=11 PYKI01003497.1 Genbank gene 874 1530 . + . ID=gene-C9F07_35200;Name=C9F07_35200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35200 PYKI01003497.1 Protein Homology CDS 874 1530 . + 0 ID=cds-TGD32163.1;Parent=gene-C9F07_35200;Dbxref=NCBI_GP:TGD32163.1;Name=TGD32163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=C9F07_35200;product=CPBP family intramembrane metalloprotease;protein_id=TGD32163.1;transl_table=11 ##sequence-region PYKI01001880.1 1 1600 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001880.1 Genbank region 1 1600 . + . ID=PYKI01001880.1:1..1600;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001880.1 Genbank gene 1 171 . - . ID=gene-C9F07_18135;Name=C9F07_18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18135;partial=true;start_range=.,1 PYKI01001880.1 Protein Homology CDS 1 171 . - 0 ID=cds-TGD62238.1;Parent=gene-C9F07_18135;Dbxref=NCBI_GP:TGD62238.1;Name=TGD62238.1;Note=involved in the movement of lipid III across the membrane;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=C9F07_18135;partial=true;product=lipid III flippase WzxE;protein_id=TGD62238.1;start_range=.,1;transl_table=11 PYKI01001880.1 Genbank gene 173 1303 . - . ID=gene-C9F07_18140;Name=C9F07_18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18140 PYKI01001880.1 Protein Homology CDS 173 1303 . - 0 ID=cds-TGD62239.1;Parent=gene-C9F07_18140;Dbxref=NCBI_GP:TGD62239.1;Name=TGD62239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457822.1;locus_tag=C9F07_18140;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=TGD62239.1;transl_table=11 PYKI01001880.1 Genbank gene 1308 1600 . - . ID=gene-C9F07_18145;Name=C9F07_18145;end_range=1600,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18145;partial=true PYKI01001880.1 Protein Homology CDS 1308 1600 . - 2 ID=cds-TGD62240.1;Parent=gene-C9F07_18145;Dbxref=NCBI_GP:TGD62240.1;Name=TGD62240.1;end_range=1600,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457823.1;locus_tag=C9F07_18145;partial=true;product=hypothetical protein;protein_id=TGD62240.1;transl_table=11 ##sequence-region PYKI01000704.1 1 1599 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000704.1 Genbank region 1 1599 . + . ID=PYKI01000704.1:1..1599;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000704.1 Genbank gene 1 132 . - . ID=gene-C9F07_06180;Name=C9F07_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06180;partial=true;start_range=.,1 PYKI01000704.1 Protein Homology CDS 1 132 . - 0 ID=cds-TGE11312.1;Parent=gene-C9F07_06180;Dbxref=NCBI_GP:TGE11312.1;Name=TGE11312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308188.1;locus_tag=C9F07_06180;partial=true;product=hypothetical protein;protein_id=TGE11312.1;start_range=.,1;transl_table=11 PYKI01000704.1 Genbank gene 169 969 . - . ID=gene-C9F07_06185;Name=C9F07_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06185 PYKI01000704.1 Protein Homology CDS 169 969 . - 0 ID=cds-TGE11310.1;Parent=gene-C9F07_06185;Dbxref=NCBI_GP:TGE11310.1;Name=TGE11310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=C9F07_06185;product=cobalamin-binding protein;protein_id=TGE11310.1;transl_table=11 PYKI01000704.1 Genbank gene 962 1599 . - . ID=gene-C9F07_06190;Name=C9F07_06190;end_range=1599,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06190;partial=true PYKI01000704.1 Protein Homology CDS 962 1599 . - 2 ID=cds-TGE11311.1;Parent=gene-C9F07_06190;Dbxref=NCBI_GP:TGE11311.1;Name=TGE11311.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;end_range=1599,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454815.1;locus_tag=C9F07_06190;partial=true;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=TGE11311.1;transl_table=11 ##sequence-region PYKI01001188.1 1 1594 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001188.1 Genbank region 1 1594 . + . ID=PYKI01001188.1:1..1594;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001188.1 Genbank gene 1 461 . - . ID=gene-C9F07_11115;Name=C9F07_11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11115;partial=true;start_range=.,1 PYKI01001188.1 Protein Homology CDS 1 461 . - 0 ID=cds-TGD92019.1;Parent=gene-C9F07_11115;Dbxref=NCBI_GP:TGD92019.1;Name=TGD92019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458573.1;locus_tag=C9F07_11115;partial=true;product=acetyl-CoA synthetase;protein_id=TGD92019.1;start_range=.,1;transl_table=11 PYKI01001188.1 Genbank gene 648 794 . + . ID=gene-C9F07_11120;Name=C9F07_11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11120 PYKI01001188.1 Protein Homology CDS 648 794 . + 0 ID=cds-TGD92020.1;Parent=gene-C9F07_11120;Dbxref=NCBI_GP:TGD92020.1;Name=TGD92020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463141.1;locus_tag=C9F07_11120;product=entericidin B precursor;protein_id=TGD92020.1;transl_table=11 PYKI01001188.1 Genbank gene 893 1594 . + . ID=gene-C9F07_11125;Name=nrfA;end_range=1594,.;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=C9F07_11125;partial=true PYKI01001188.1 Protein Homology CDS 893 1594 . + 0 ID=cds-TGD92021.1;Parent=gene-C9F07_11125;Dbxref=NCBI_GP:TGD92021.1;Name=TGD92021.1;Note=catalyzes the formate-dependent reduction of nitrite to ammonia%3B cytochrome C552;end_range=1594,.;gbkey=CDS;gene=nrfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458575.1;locus_tag=C9F07_11125;partial=true;product=ammonia-forming cytochrome c nitrite reductase subunit c552;protein_id=TGD92021.1;transl_table=11 ##sequence-region PYKI01001707.1 1 1594 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001707.1 Genbank region 1 1594 . + . ID=PYKI01001707.1:1..1594;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001707.1 Genbank gene 1 1594 . - . ID=gene-C9F07_16275;Name=C9F07_16275;end_range=1594,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16275;partial=true;start_range=.,1 PYKI01001707.1 Protein Homology CDS 1 1594 . - 0 ID=cds-TGD69378.1;Parent=gene-C9F07_16275;Dbxref=NCBI_GP:TGD69378.1;Name=TGD69378.1;end_range=1594,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458115.1;locus_tag=C9F07_16275;partial=true;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=TGD69378.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002595.1 1 1593 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002595.1 Genbank region 1 1593 . + . ID=PYKI01002595.1:1..1593;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002595.1 Genbank gene 1 854 . + . ID=gene-C9F07_25765;Name=C9F07_25765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25765;partial=true;start_range=.,1 PYKI01002595.1 Protein Homology CDS 1 854 . + 2 ID=cds-TGD49653.1;Parent=gene-C9F07_25765;Dbxref=NCBI_GP:TGD49653.1;Name=TGD49653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457975.1;locus_tag=C9F07_25765;partial=true;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=TGD49653.1;start_range=.,1;transl_table=11 PYKI01002595.1 Genbank gene 883 1593 . + . ID=gene-C9F07_25770;Name=C9F07_25770;end_range=1593,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25770;partial=true PYKI01002595.1 Protein Homology CDS 883 1593 . + 0 ID=cds-TGD49654.1;Parent=gene-C9F07_25770;Dbxref=NCBI_GP:TGD49654.1;Name=TGD49654.1;end_range=1593,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462959.1;locus_tag=C9F07_25770;partial=true;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=TGD49654.1;transl_table=11 ##sequence-region PYKI01003502.1 1 1591 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003502.1 Genbank region 1 1591 . + . ID=PYKI01003502.1:1..1591;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003502.1 Genbank gene 1 178 . + . ID=gene-C9F07_35260;Name=C9F07_35260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35260;partial=true;start_range=.,1 PYKI01003502.1 Protein Homology CDS 1 178 . + 1 ID=cds-TGD31917.1;Parent=gene-C9F07_35260;Dbxref=NCBI_GP:TGD31917.1;Name=TGD31917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=C9F07_35260;partial=true;product=hypothetical protein;protein_id=TGD31917.1;start_range=.,1;transl_table=11 PYKI01003502.1 Genbank gene 178 555 . + . ID=gene-C9F07_35265;Name=C9F07_35265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35265 PYKI01003502.1 Protein Homology CDS 178 555 . + 0 ID=cds-TGD31918.1;Parent=gene-C9F07_35265;Dbxref=NCBI_GP:TGD31918.1;Name=TGD31918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=C9F07_35265;product=4-amino-4-deoxy-L-arabinose-phospho-UDP flippase;protein_id=TGD31918.1;transl_table=11 PYKI01003502.1 Genbank gene 550 807 . - . ID=gene-C9F07_35270;Name=C9F07_35270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35270 PYKI01003502.1 Protein Homology CDS 550 807 . - 0 ID=cds-TGD31919.1;Parent=gene-C9F07_35270;Dbxref=NCBI_GP:TGD31919.1;Name=TGD31919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=C9F07_35270;product=signal transduction protein PmrD;protein_id=TGD31919.1;transl_table=11 PYKI01003502.1 Genbank gene 905 1591 . - . ID=gene-C9F07_35275;Name=C9F07_35275;end_range=1591,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35275;partial=true PYKI01003502.1 Protein Homology CDS 905 1591 . - 0 ID=cds-TGD31920.1;Parent=gene-C9F07_35275;Dbxref=NCBI_GP:TGD31920.1;Name=TGD31920.1;end_range=1591,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456848.1;locus_tag=C9F07_35275;partial=true;product=o-succinylbenzoate--CoA ligase;protein_id=TGD31920.1;transl_table=11 ##sequence-region PYKI01002481.1 1 1590 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002481.1 Genbank region 1 1590 . + . ID=PYKI01002481.1:1..1590;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002481.1 Genbank pseudogene 62 436 . + . ID=gene-C9F07_24505;Name=C9F07_24505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24505;pseudo=true PYKI01002481.1 Protein Homology CDS 62 436 . + 0 ID=cds-C9F07_24505;Parent=gene-C9F07_24505;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457723.1;locus_tag=C9F07_24505;product=cell division protein ZapE;pseudo=true;transl_table=11 PYKI01002481.1 Genbank gene 738 1166 . + . ID=gene-C9F07_24510;Name=C9F07_24510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24510 PYKI01002481.1 Protein Homology CDS 738 1166 . + 0 ID=cds-TGD50475.1;Parent=gene-C9F07_24510;Dbxref=NCBI_GP:TGD50475.1;Name=TGD50475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312131.1;locus_tag=C9F07_24510;product=50S ribosomal protein L13;protein_id=TGD50475.1;transl_table=11 PYKI01002481.1 Genbank gene 1182 1590 . + . ID=gene-C9F07_24515;Name=C9F07_24515;end_range=1590,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24515;partial=true PYKI01002481.1 Protein Homology CDS 1182 1590 . + 0 ID=cds-TGD50476.1;Parent=gene-C9F07_24515;Dbxref=NCBI_GP:TGD50476.1;Name=TGD50476.1;end_range=1590,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=C9F07_24515;partial=true;product=30S ribosomal protein S9;protein_id=TGD50476.1;transl_table=11 ##sequence-region PYKI01001127.1 1 4422 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001127.1 Genbank region 1 4422 . + . ID=PYKI01001127.1:1..4422;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001127.1 Genbank gene 1 207 . + . ID=gene-C9F07_10480;Name=C9F07_10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10480;partial=true;start_range=.,1 PYKI01001127.1 Protein Homology CDS 1 207 . + 0 ID=cds-TGD94799.1;Parent=gene-C9F07_10480;Dbxref=NCBI_GP:TGD94799.1;Name=TGD94799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458927.1;locus_tag=C9F07_10480;partial=true;product=hypothetical protein;protein_id=TGD94799.1;start_range=.,1;transl_table=11 PYKI01001127.1 Genbank gene 559 1470 . + . ID=gene-C9F07_10485;Name=C9F07_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10485 PYKI01001127.1 Protein Homology CDS 559 1470 . + 0 ID=cds-TGD94800.1;Parent=gene-C9F07_10485;Dbxref=NCBI_GP:TGD94800.1;Name=TGD94800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=C9F07_10485;product=hypothetical protein;protein_id=TGD94800.1;transl_table=11 PYKI01001127.1 Genbank gene 1676 2137 . + . ID=gene-C9F07_10490;Name=C9F07_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10490 PYKI01001127.1 Protein Homology CDS 1676 2137 . + 0 ID=cds-TGD94801.1;Parent=gene-C9F07_10490;Dbxref=NCBI_GP:TGD94801.1;Name=TGD94801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=C9F07_10490;product=DUF302 domain-containing protein;protein_id=TGD94801.1;transl_table=11 PYKI01001127.1 Genbank gene 2134 2808 . - . ID=gene-C9F07_10495;Name=C9F07_10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10495 PYKI01001127.1 Protein Homology CDS 2134 2808 . - 0 ID=cds-TGD94805.1;Parent=gene-C9F07_10495;Dbxref=NCBI_GP:TGD94805.1;Name=TGD94805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463365.1;locus_tag=C9F07_10495;product=dienelactone hydrolase family protein;protein_id=TGD94805.1;transl_table=11 PYKI01001127.1 Genbank gene 2911 3123 . + . ID=gene-C9F07_10500;Name=C9F07_10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10500 PYKI01001127.1 Protein Homology CDS 2911 3123 . + 0 ID=cds-TGD94802.1;Parent=gene-C9F07_10500;Dbxref=NCBI_GP:TGD94802.1;Name=TGD94802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219569.1;locus_tag=C9F07_10500;product=hypothetical protein;protein_id=TGD94802.1;transl_table=11 PYKI01001127.1 Genbank gene 3158 3931 . + . ID=gene-C9F07_10505;Name=C9F07_10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10505 PYKI01001127.1 Protein Homology CDS 3158 3931 . + 0 ID=cds-TGD94803.1;Parent=gene-C9F07_10505;Dbxref=NCBI_GP:TGD94803.1;Name=TGD94803.1;Note=regulates the expression of uxuBA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=C9F07_10505;product=GntR family transcriptional regulator;protein_id=TGD94803.1;transl_table=11 PYKI01001127.1 Genbank gene 3932 4422 . - . ID=gene-C9F07_10510;Name=C9F07_10510;end_range=4422,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10510;partial=true PYKI01001127.1 Protein Homology CDS 3932 4422 . - 2 ID=cds-TGD94804.1;Parent=gene-C9F07_10510;Dbxref=NCBI_GP:TGD94804.1;Name=TGD94804.1;end_range=4422,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=C9F07_10510;partial=true;product=tryptophan--tRNA ligase;protein_id=TGD94804.1;transl_table=11 ##sequence-region PYKI01001107.1 1 1590 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001107.1 Genbank region 1 1590 . + . ID=PYKI01001107.1:1..1590;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001107.1 Genbank pseudogene 1 1590 . - . ID=gene-C9F07_10325;Name=C9F07_10325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10325;pseudo=true PYKI01001107.1 Protein Homology CDS 1 1590 . - 0 ID=cds-C9F07_10325;Parent=gene-C9F07_10325;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418541.2;locus_tag=C9F07_10325;product=arginine decarboxylase;pseudo=true;transl_table=11 ##sequence-region PYKI01002864.1 1 1589 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002864.1 Genbank region 1 1589 . + . ID=PYKI01002864.1:1..1589;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002864.1 Genbank gene 1 220 . - . ID=gene-C9F07_28690;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=C9F07_28690;partial=true;start_range=.,1 PYKI01002864.1 Protein Homology CDS 1 220 . - 0 ID=cds-TGD44959.1;Parent=gene-C9F07_28690;Dbxref=NCBI_GP:TGD44959.1;Name=TGD44959.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=C9F07_28690;partial=true;product=ribosome maturation factor RimM;protein_id=TGD44959.1;start_range=.,1;transl_table=11 PYKI01002864.1 Genbank gene 239 487 . - . ID=gene-C9F07_28695;Name=C9F07_28695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28695 PYKI01002864.1 Protein Homology CDS 239 487 . - 0 ID=cds-TGD44960.1;Parent=gene-C9F07_28695;Dbxref=NCBI_GP:TGD44960.1;Name=TGD44960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311499.1;locus_tag=C9F07_28695;product=30S ribosomal protein S16;protein_id=TGD44960.1;transl_table=11 PYKI01002864.1 Genbank gene 740 1589 . - . ID=gene-C9F07_28700;Name=C9F07_28700;end_range=1589,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28700;partial=true PYKI01002864.1 Protein Homology CDS 740 1589 . - 1 ID=cds-TGD44961.1;Parent=gene-C9F07_28700;Dbxref=NCBI_GP:TGD44961.1;Name=TGD44961.1;end_range=1589,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=C9F07_28700;partial=true;product=signal recognition particle protein;protein_id=TGD44961.1;transl_table=11 ##sequence-region PYKI01002994.1 1 1588 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002994.1 Genbank region 1 1588 . + . ID=PYKI01002994.1:1..1588;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002994.1 Genbank gene 1 1588 . + . ID=gene-C9F07_30050;Name=C9F07_30050;end_range=1588,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30050;partial=true;start_range=.,1 PYKI01002994.1 Protein Homology CDS 1 1588 . + 0 ID=cds-TGD41309.1;Parent=gene-C9F07_30050;Dbxref=NCBI_GP:TGD41309.1;Name=TGD41309.1;end_range=1588,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457174.1;locus_tag=C9F07_30050;partial=true;product=multidrug ABC transporter ATP-binding protein;protein_id=TGD41309.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002768.1 1 1584 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002768.1 Genbank region 1 1584 . + . ID=PYKI01002768.1:1..1584;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002768.1 Genbank gene 108 1016 . - . ID=gene-C9F07_27655;Name=C9F07_27655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27655 PYKI01002768.1 Protein Homology CDS 108 1016 . - 0 ID=cds-TGD46518.1;Parent=gene-C9F07_27655;Dbxref=NCBI_GP:TGD46518.1;Name=TGD46518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457324.1;locus_tag=C9F07_27655;product=sulfate adenylyltransferase subunit CysD;protein_id=TGD46518.1;transl_table=11 PYKI01002768.1 Genbank gene 1267 1584 . + . ID=gene-C9F07_27660;Name=C9F07_27660;end_range=1584,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27660;partial=true PYKI01002768.1 Protein Homology CDS 1267 1584 . + 0 ID=cds-TGD46519.1;Parent=gene-C9F07_27660;Dbxref=NCBI_GP:TGD46519.1;Name=TGD46519.1;Note=catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3;end_range=1584,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457325.1;locus_tag=C9F07_27660;partial=true;product=aminopeptidase;protein_id=TGD46519.1;transl_table=11 ##sequence-region PYKI01000401.1 1 1583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000401.1 Genbank region 1 1583 . + . ID=PYKI01000401.1:1..1583;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000401.1 Genbank pseudogene 72 299 . - . ID=gene-C9F07_03055;Name=C9F07_03055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03055;pseudo=true PYKI01000401.1 Protein Homology CDS 72 299 . - 0 ID=cds-C9F07_03055;Parent=gene-C9F07_03055;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455930.1;locus_tag=C9F07_03055;product=acid-resistance protein;pseudo=true;transl_table=11 PYKI01000401.1 Genbank pseudogene 534 766 . - . ID=gene-C9F07_03060;Name=C9F07_03060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03060;pseudo=true PYKI01000401.1 Protein Homology CDS 534 766 . - 0 ID=cds-C9F07_03060;Parent=gene-C9F07_03060;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000144646.1;locus_tag=C9F07_03060;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000401.1 Genbank gene 1067 1583 . + . ID=gene-C9F07_03065;Name=C9F07_03065;end_range=1583,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03065;partial=true PYKI01000401.1 Protein Homology CDS 1067 1583 . + 0 ID=cds-TGE22766.1;Parent=gene-C9F07_03065;Dbxref=NCBI_GP:TGE22766.1;Name=TGE22766.1;end_range=1583,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778346.1;locus_tag=C9F07_03065;partial=true;product=hypothetical protein;protein_id=TGE22766.1;transl_table=11 ##sequence-region PYKI01003413.1 1 1583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003413.1 Genbank region 1 1583 . + . ID=PYKI01003413.1:1..1583;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003413.1 Genbank gene 1 227 . + . ID=gene-C9F07_34310;Name=C9F07_34310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34310;partial=true;start_range=.,1 PYKI01003413.1 Protein Homology CDS 1 227 . + 2 ID=cds-TGD33781.1;Parent=gene-C9F07_34310;Dbxref=NCBI_GP:TGD33781.1;Name=TGD33781.1;Note=Transcription regulator that can both activate or repress expression;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=C9F07_34310;partial=true;product=transcriptional regulator SlyA;protein_id=TGD33781.1;start_range=.,1;transl_table=11 PYKI01003413.1 Genbank gene 275 742 . - . ID=gene-C9F07_34315;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=C9F07_34315 PYKI01003413.1 Protein Homology CDS 275 742 . - 0 ID=cds-TGD33782.1;Parent=gene-C9F07_34315;Dbxref=NCBI_GP:TGD33782.1;Name=TGD33782.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456085.1;locus_tag=C9F07_34315;product=outer membrane lipoprotein SlyB;protein_id=TGD33782.1;transl_table=11 PYKI01003413.1 Genbank gene 1015 1583 . + . ID=gene-C9F07_34320;Name=anmK;end_range=1583,.;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;gene_synonym=ydhH;locus_tag=C9F07_34320;partial=true PYKI01003413.1 Protein Homology CDS 1015 1583 . + 0 ID=cds-TGD33783.1;Parent=gene-C9F07_34320;Dbxref=NCBI_GP:TGD33783.1;Name=TGD33783.1;Note=catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling;end_range=1583,.;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456084.1;locus_tag=C9F07_34320;partial=true;product=anhydro-N-acetylmuramic acid kinase;protein_id=TGD33783.1;transl_table=11 ##sequence-region PYKI01000365.1 1 1583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000365.1 Genbank region 1 1583 . + . ID=PYKI01000365.1:1..1583;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000365.1 Genbank gene 1 261 . - . ID=gene-C9F07_02755;Name=C9F07_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02755;partial=true;start_range=.,1 PYKI01000365.1 Protein Homology CDS 1 261 . - 0 ID=cds-TGE23191.1;Parent=gene-C9F07_02755;Dbxref=NCBI_GP:TGE23191.1;Name=TGE23191.1;Note=poxA%3B regulates pyruvate oxidase poxB;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=C9F07_02755;partial=true;product=elongation factor P lysine(34) lysyltransferase;protein_id=TGE23191.1;start_range=.,1;transl_table=11 PYKI01000365.1 Genbank pseudogene 584 1501 . + . ID=gene-C9F07_02760;Name=C9F07_02760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02760;pseudo=true PYKI01000365.1 Protein Homology CDS 584 1501 . + 0 ID=cds-C9F07_02760;Parent=gene-C9F07_02760;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458782.1;locus_tag=C9F07_02760;product=fumarate reductase (quinol) flavoprotein subunit;pseudo=true;transl_table=11 ##sequence-region PYKI01001758.1 1 1582 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001758.1 Genbank region 1 1582 . + . ID=PYKI01001758.1:1..1582;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001758.1 Genbank gene 85 1047 . + . ID=gene-C9F07_16885;Name=C9F07_16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16885 PYKI01001758.1 Protein Homology CDS 85 1047 . + 0 ID=cds-TGD68135.1;Parent=gene-C9F07_16885;Dbxref=NCBI_GP:TGD68135.1;Name=TGD68135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=C9F07_16885;product=ferrochelatase;protein_id=TGD68135.1;transl_table=11 PYKI01001758.1 Genbank gene 1044 1582 . - . ID=gene-C9F07_16890;Name=C9F07_16890;end_range=1582,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16890;partial=true PYKI01001758.1 Protein Homology CDS 1044 1582 . - 2 ID=cds-TGD68136.1;Parent=gene-C9F07_16890;Dbxref=NCBI_GP:TGD68136.1;Name=TGD68136.1;end_range=1582,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455086.1;locus_tag=C9F07_16890;partial=true;product=acetylesterase;protein_id=TGD68136.1;transl_table=11 ##sequence-region PYKI01002727.1 1 1582 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002727.1 Genbank region 1 1582 . + . ID=PYKI01002727.1:1..1582;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002727.1 Genbank gene 1 485 . + . ID=gene-C9F07_27220;Name=C9F07_27220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27220;partial=true;start_range=.,1 PYKI01002727.1 Protein Homology CDS 1 485 . + 2 ID=cds-TGD47409.1;Parent=gene-C9F07_27220;Dbxref=NCBI_GP:TGD47409.1;Name=TGD47409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=C9F07_27220;partial=true;product=hypothetical protein;protein_id=TGD47409.1;start_range=.,1;transl_table=11 PYKI01002727.1 Genbank gene 447 857 . - . ID=gene-C9F07_27225;Name=C9F07_27225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27225 PYKI01002727.1 Protein Homology CDS 447 857 . - 0 ID=cds-TGD47410.1;Parent=gene-C9F07_27225;Dbxref=NCBI_GP:TGD47410.1;Name=TGD47410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455352.1;locus_tag=C9F07_27225;product=hypothetical protein;protein_id=TGD47410.1;transl_table=11 PYKI01002727.1 Genbank gene 990 1582 . + . ID=gene-C9F07_27230;Name=C9F07_27230;end_range=1582,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27230;partial=true PYKI01002727.1 Protein Homology CDS 990 1582 . + 0 ID=cds-TGD47411.1;Parent=gene-C9F07_27230;Dbxref=NCBI_GP:TGD47411.1;Name=TGD47411.1;end_range=1582,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=C9F07_27230;partial=true;product=hypothetical protein;protein_id=TGD47411.1;transl_table=11 ##sequence-region PYKI01002402.1 1 4414 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002402.1 Genbank region 1 4414 . + . ID=PYKI01002402.1:1..4414;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002402.1 Genbank pseudogene 79 972 . - . ID=gene-C9F07_23655;Name=C9F07_23655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23655;pseudo=true PYKI01002402.1 Protein Homology CDS 79 972 . - 0 ID=cds-C9F07_23655;Parent=gene-C9F07_23655;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455065.1;locus_tag=C9F07_23655;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002402.1 Genbank gene 1197 1460 . + . ID=gene-C9F07_23660;Name=C9F07_23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23660 PYKI01002402.1 Protein Homology CDS 1197 1460 . + 0 ID=cds-TGD51912.1;Parent=gene-C9F07_23660;Dbxref=NCBI_GP:TGD51912.1;Name=TGD51912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801422.1;locus_tag=C9F07_23660;product=type B 50S ribosomal protein L31;protein_id=TGD51912.1;transl_table=11 PYKI01002402.1 Genbank gene 1462 1602 . + . ID=gene-C9F07_23665;Name=C9F07_23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23665 PYKI01002402.1 Protein Homology CDS 1462 1602 . + 0 ID=cds-TGD51913.1;Parent=gene-C9F07_23665;Dbxref=NCBI_GP:TGD51913.1;Name=TGD51913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455067.1;locus_tag=C9F07_23665;product=50S ribosomal protein L36;protein_id=TGD51913.1;transl_table=11 PYKI01002402.1 Genbank gene 1658 2128 . - . ID=gene-C9F07_23670;Name=C9F07_23670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23670 PYKI01002402.1 Protein Homology CDS 1658 2128 . - 0 ID=cds-TGD51914.1;Parent=gene-C9F07_23670;Dbxref=NCBI_GP:TGD51914.1;Name=TGD51914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455068.1;locus_tag=C9F07_23670;product=hypothetical protein;protein_id=TGD51914.1;transl_table=11 PYKI01002402.1 Genbank gene 2246 2797 . - . ID=gene-C9F07_23675;Name=C9F07_23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23675 PYKI01002402.1 Protein Homology CDS 2246 2797 . - 0 ID=cds-TGD51915.1;Parent=gene-C9F07_23675;Dbxref=NCBI_GP:TGD51915.1;Name=TGD51915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455069.1;locus_tag=C9F07_23675;product=maltose O-acetyltransferase;protein_id=TGD51915.1;transl_table=11 PYKI01002402.1 Genbank gene 2976 3194 . - . ID=gene-C9F07_23680;Name=C9F07_23680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23680 PYKI01002402.1 Protein Homology CDS 2976 3194 . - 0 ID=cds-TGD51916.1;Parent=gene-C9F07_23680;Dbxref=NCBI_GP:TGD51916.1;Name=TGD51916.1;Note=with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455070.1;locus_tag=C9F07_23680;product=hemolysin expression-modulating protein Hha;protein_id=TGD51916.1;transl_table=11 PYKI01002402.1 Genbank gene 3222 3596 . - . ID=gene-C9F07_23685;Name=C9F07_23685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23685 PYKI01002402.1 Protein Homology CDS 3222 3596 . - 0 ID=cds-TGD51917.1;Parent=gene-C9F07_23685;Dbxref=NCBI_GP:TGD51917.1;Name=TGD51917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=C9F07_23685;product=Hha toxicity attenuator;protein_id=TGD51917.1;transl_table=11 PYKI01002402.1 Genbank gene 4092 4414 . - . ID=gene-C9F07_23690;Name=C9F07_23690;end_range=4414,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23690;partial=true PYKI01002402.1 Protein Homology CDS 4092 4414 . - 2 ID=cds-TGD51918.1;Parent=gene-C9F07_23690;Dbxref=NCBI_GP:TGD51918.1;Name=TGD51918.1;end_range=4414,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=C9F07_23690;partial=true;product=hydrophobe/amphiphile efflux-1 family RND transporter;protein_id=TGD51918.1;transl_table=11 ##sequence-region PYKI01000527.1 1 1579 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000527.1 Genbank region 1 1579 . + . ID=PYKI01000527.1:1..1579;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000527.1 Genbank gene 1 559 . - . ID=gene-C9F07_04360;Name=C9F07_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04360;partial=true;start_range=.,1 PYKI01000527.1 Protein Homology CDS 1 559 . - 0 ID=cds-TGE16088.1;Parent=gene-C9F07_04360;Dbxref=NCBI_GP:TGE16088.1;Name=TGE16088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456510.1;locus_tag=C9F07_04360;partial=true;product=two-component system response regulator UvrY;protein_id=TGE16088.1;start_range=.,1;transl_table=11 PYKI01000527.1 Genbank gene 871 1026 . + . ID=gene-C9F07_04365;Name=C9F07_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04365 PYKI01000527.1 Protein Homology CDS 871 1026 . + 0 ID=cds-TGE16085.1;Parent=gene-C9F07_04365;Dbxref=NCBI_GP:TGE16085.1;Name=TGE16085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=C9F07_04365;product=hypothetical protein;protein_id=TGE16085.1;transl_table=11 PYKI01000527.1 Genbank gene 1023 1247 . + . ID=gene-C9F07_04370;Name=C9F07_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04370 PYKI01000527.1 Protein Homology CDS 1023 1247 . + 0 ID=cds-TGE16086.1;Parent=gene-C9F07_04370;Dbxref=NCBI_GP:TGE16086.1;Name=TGE16086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456512.1;locus_tag=C9F07_04370;product=hypothetical protein;protein_id=TGE16086.1;transl_table=11 PYKI01000527.1 Genbank gene 1314 1579 . - . ID=gene-C9F07_04375;Name=C9F07_04375;end_range=1579,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04375;partial=true PYKI01000527.1 Protein Homology CDS 1314 1579 . - 2 ID=cds-TGE16087.1;Parent=gene-C9F07_04375;Dbxref=NCBI_GP:TGE16087.1;Name=TGE16087.1;end_range=1579,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=C9F07_04375;partial=true;product=transcriptional regulator SdiA;protein_id=TGE16087.1;transl_table=11 ##sequence-region PYKI01000288.1 1 1578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000288.1 Genbank region 1 1578 . + . ID=PYKI01000288.1:1..1578;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000288.1 Genbank gene 1 554 . - . ID=gene-C9F07_01875;Name=C9F07_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01875;partial=true;start_range=.,1 PYKI01000288.1 Protein Homology CDS 1 554 . - 0 ID=cds-TGE27818.1;Parent=gene-C9F07_01875;Dbxref=NCBI_GP:TGE27818.1;Name=TGE27818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=C9F07_01875;partial=true;product=arginine N-succinyltransferase;protein_id=TGE27818.1;start_range=.,1;transl_table=11 PYKI01000288.1 Genbank pseudogene 545 1552 . - . ID=gene-C9F07_01880;Name=C9F07_01880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01880;pseudo=true PYKI01000288.1 Protein Homology CDS 545 1552 . - 0 ID=cds-C9F07_01880;Parent=gene-C9F07_01880;Note=catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate%3B also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456209.1;locus_tag=C9F07_01880;product=aspartate aminotransferase family protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002659.1 1 1578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002659.1 Genbank region 1 1578 . + . ID=PYKI01002659.1:1..1578;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002659.1 Genbank gene 1 1253 . - . ID=gene-C9F07_26475;Name=C9F07_26475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26475;partial=true;start_range=.,1 PYKI01002659.1 Protein Homology CDS 1 1253 . - 0 ID=cds-TGD49211.1;Parent=gene-C9F07_26475;Dbxref=NCBI_GP:TGD49211.1;Name=TGD49211.1;Note=catalyses the hydrolysis of terminal non-reducing alpha-D-galactose residues in alpha-D-galactosides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=C9F07_26475;partial=true;product=alpha-glucosidase/alpha-galactosidase;protein_id=TGD49211.1;start_range=.,1;transl_table=11 PYKI01002659.1 Genbank gene 1324 1578 . + . ID=gene-C9F07_26480;Name=C9F07_26480;end_range=1578,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26480;partial=true PYKI01002659.1 Protein Homology CDS 1324 1578 . + 0 ID=cds-TGD49212.1;Parent=gene-C9F07_26480;Dbxref=NCBI_GP:TGD49212.1;Name=TGD49212.1;end_range=1578,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576547.1;locus_tag=C9F07_26480;partial=true;product=transcriptional regulator MelR;protein_id=TGD49212.1;transl_table=11 ##sequence-region PYKI01001691.1 1 1577 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001691.1 Genbank region 1 1577 . + . ID=PYKI01001691.1:1..1577;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001691.1 Genbank gene 1 521 . - . ID=gene-C9F07_16130;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=C9F07_16130;partial=true;start_range=.,1 PYKI01001691.1 Protein Homology CDS 1 521 . - 0 ID=cds-TGD69718.1;Parent=gene-C9F07_16130;Dbxref=NCBI_GP:TGD69718.1;Name=TGD69718.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=C9F07_16130;partial=true;product=SPI-2 type III secretion system effector PipB;protein_id=TGD69718.1;start_range=.,1;transl_table=11 PYKI01001691.1 Genbank gene 1070 1411 . - . ID=gene-C9F07_16135;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=C9F07_16135 PYKI01001691.1 Protein Homology CDS 1070 1411 . - 0 ID=cds-TGD69719.1;Parent=gene-C9F07_16135;Dbxref=NCBI_GP:TGD69719.1;Name=TGD69719.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=C9F07_16135;product=type III secretion system chaperone SigE;protein_id=TGD69719.1;transl_table=11 PYKI01001691.1 Genbank pseudogene 1428 1562 . - . ID=gene-C9F07_16140;Name=C9F07_16140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16140;pseudo=true PYKI01001691.1 Protein Homology CDS 1428 1562 . - 0 ID=cds-C9F07_16140;Parent=gene-C9F07_16140;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455588.1;locus_tag=C9F07_16140;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003451.1 1 1576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003451.1 Genbank region 1 1576 . + . ID=PYKI01003451.1:1..1576;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003451.1 Genbank gene 1 400 . + . ID=gene-C9F07_34685;Name=C9F07_34685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34685;partial=true;start_range=.,1 PYKI01003451.1 Protein Homology CDS 1 400 . + 1 ID=cds-TGD33395.1;Parent=gene-C9F07_34685;Dbxref=NCBI_GP:TGD33395.1;Name=TGD33395.1;Note=regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457963.1;locus_tag=C9F07_34685;partial=true;product=ribonuclease E activity regulator RraA;protein_id=TGD33395.1;start_range=.,1;transl_table=11 PYKI01003451.1 Genbank gene 622 861 . - . ID=gene-C9F07_34690;Name=C9F07_34690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34690 PYKI01003451.1 Protein Homology CDS 622 861 . - 0 ID=cds-TGD33396.1;Parent=gene-C9F07_34690;Dbxref=NCBI_GP:TGD33396.1;Name=TGD33396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501806.1;locus_tag=C9F07_34690;product=cell division protein ZapB;protein_id=TGD33396.1;transl_table=11 PYKI01003451.1 Genbank gene 1260 1576 . + . ID=gene-C9F07_34695;Name=C9F07_34695;end_range=1576,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34695;partial=true PYKI01003451.1 Protein Homology CDS 1260 1576 . + 0 ID=cds-TGD33397.1;Parent=gene-C9F07_34695;Dbxref=NCBI_GP:TGD33397.1;Name=TGD33397.1;Note=involved in the transport of glycerol into the cell;end_range=1576,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457965.1;locus_tag=C9F07_34695;partial=true;product=aquaporin;protein_id=TGD33397.1;transl_table=11 ##sequence-region PYKI01003212.1 1 1576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003212.1 Genbank region 1 1576 . + . ID=PYKI01003212.1:1..1576;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003212.1 Genbank pseudogene 1 802 . - . ID=gene-C9F07_32295;Name=C9F07_32295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32295;pseudo=true PYKI01003212.1 Protein Homology CDS 1 802 . - 0 ID=cds-C9F07_32295;Parent=gene-C9F07_32295;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=C9F07_32295;product=L-2-hydroxyglutarate oxidase;pseudo=true;transl_table=11 PYKI01003212.1 Genbank pseudogene 828 1523 . - . ID=gene-C9F07_32300;Name=C9F07_32300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32300;pseudo=true PYKI01003212.1 Protein Homology CDS 828 1523 . - 0 ID=cds-C9F07_32300;Parent=gene-C9F07_32300;Note=in Escherichia coli this gene is induced by carbon starvation and depends on sigma S and cAMP-CRP%3B the structure of the Gab protein shows it is a member of non-heme iron (II)-dependent oxygenase superfamily which includes clavamini acid synthases%3B forms homotetramers in solution%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457188.3;locus_tag=C9F07_32300;product=carbon starvation induced protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001321.1 1 1575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001321.1 Genbank region 1 1575 . + . ID=PYKI01001321.1:1..1575;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001321.1 Genbank pseudogene 325 948 . - . ID=gene-C9F07_12370;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=pseudogene;locus_tag=C9F07_12370;pseudo=true PYKI01001321.1 Protein Homology CDS 325 948 . - 0 ID=cds-C9F07_12370;Parent=gene-C9F07_12370;Note=internal stop;gbkey=CDS;gene=clpP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=C9F07_12370;product=ATP-dependent Clp endopeptidase%2C proteolytic subunit ClpP;pseudo=true;transl_table=11 PYKI01001321.1 Genbank gene 1195 1575 . - . ID=gene-C9F07_12375;Name=C9F07_12375;end_range=1575,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12375;partial=true PYKI01001321.1 Protein Homology CDS 1195 1575 . - 0 ID=cds-TGD86175.1;Parent=gene-C9F07_12375;Dbxref=NCBI_GP:TGD86175.1;Name=TGD86175.1;end_range=1575,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=C9F07_12375;partial=true;product=trigger factor;protein_id=TGD86175.1;transl_table=11 ##sequence-region PYKI01001648.1 1 1574 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001648.1 Genbank region 1 1574 . + . ID=PYKI01001648.1:1..1574;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001648.1 Genbank gene 1 605 . + . ID=gene-C9F07_15740;Name=C9F07_15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15740;partial=true;start_range=.,1 PYKI01001648.1 Protein Homology CDS 1 605 . + 2 ID=cds-TGD70280.1;Parent=gene-C9F07_15740;Dbxref=NCBI_GP:TGD70280.1;Name=TGD70280.1;Note=Involved in anaerobic NO protection and iron metabolism;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458835.1;locus_tag=C9F07_15740;partial=true;product=iron-sulfur cluster repair protein YtfE;protein_id=TGD70280.1;start_range=.,1;transl_table=11 PYKI01001648.1 Genbank gene 717 1574 . - . ID=gene-C9F07_15745;Name=C9F07_15745;end_range=1574,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15745;partial=true PYKI01001648.1 Protein Homology CDS 717 1574 . - 0 ID=cds-TGD70281.1;Parent=gene-C9F07_15745;Dbxref=NCBI_GP:TGD70281.1;Name=TGD70281.1;end_range=1574,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=C9F07_15745;partial=true;product=D-serine/D-alanine/glycine transporter;protein_id=TGD70281.1;transl_table=11 ##sequence-region PYKI01000821.1 1 1573 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000821.1 Genbank region 1 1573 . + . ID=PYKI01000821.1:1..1573;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000821.1 Genbank gene 1 188 . - . ID=gene-C9F07_07425;Name=C9F07_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07425;partial=true;start_range=.,1 PYKI01000821.1 Protein Homology CDS 1 188 . - 0 ID=cds-TGE07367.1;Parent=gene-C9F07_07425;Dbxref=NCBI_GP:TGE07367.1;Name=TGE07367.1;Note=catalyzes the formation of 4-aminobutanoate from 4-aminobutanal%3B involved in putrescine degradation;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=C9F07_07425;partial=true;product=gamma-aminobutyraldehyde dehydrogenase;protein_id=TGE07367.1;start_range=.,1;transl_table=11 PYKI01000821.1 Genbank gene 303 1573 . - . ID=gene-C9F07_07430;Name=C9F07_07430;end_range=1573,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07430;partial=true PYKI01000821.1 Protein Homology CDS 303 1573 . - 2 ID=cds-TGE07368.1;Parent=gene-C9F07_07430;Dbxref=NCBI_GP:TGE07368.1;Name=TGE07368.1;end_range=1573,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=C9F07_07430;partial=true;product=GntR family transcriptional regulator;protein_id=TGE07368.1;transl_table=11 ##sequence-region PYKI01002932.1 1 1573 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002932.1 Genbank region 1 1573 . + . ID=PYKI01002932.1:1..1573;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002932.1 Genbank gene 1 334 . - . ID=gene-C9F07_29375;Name=C9F07_29375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29375;partial=true;start_range=.,1 PYKI01002932.1 Protein Homology CDS 1 334 . - 0 ID=cds-TGD42817.1;Parent=gene-C9F07_29375;Dbxref=NCBI_GP:TGD42817.1;Name=TGD42817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=C9F07_29375;partial=true;product=hypothetical protein;protein_id=TGD42817.1;start_range=.,1;transl_table=11 PYKI01002932.1 Genbank gene 334 1573 . - . ID=gene-C9F07_29380;Name=C9F07_29380;end_range=1573,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29380;partial=true PYKI01002932.1 Protein Homology CDS 334 1573 . - 1 ID=cds-TGD42818.1;Parent=gene-C9F07_29380;Dbxref=NCBI_GP:TGD42818.1;Name=TGD42818.1;end_range=1573,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=C9F07_29380;partial=true;product=2-isopropylmalate synthase;protein_id=TGD42818.1;transl_table=11 ##sequence-region PYKI01002342.1 1 1571 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002342.1 Genbank region 1 1571 . + . ID=PYKI01002342.1:1..1571;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002342.1 Genbank gene 15 200 . + . ID=gene-C9F07_23015;Name=C9F07_23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23015 PYKI01002342.1 Protein Homology CDS 15 200 . + 0 ID=cds-TGD53509.1;Parent=gene-C9F07_23015;Dbxref=NCBI_GP:TGD53509.1;Name=TGD53509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533948.1;locus_tag=C9F07_23015;product=hypothetical protein;protein_id=TGD53509.1;transl_table=11 PYKI01002342.1 Genbank gene 178 939 . - . ID=gene-C9F07_23020;Name=C9F07_23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23020 PYKI01002342.1 Protein Homology CDS 178 939 . - 0 ID=cds-TGD53510.1;Parent=gene-C9F07_23020;Dbxref=NCBI_GP:TGD53510.1;Name=TGD53510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456966.1;locus_tag=C9F07_23020;product=sulfate transporter CysZ;protein_id=TGD53510.1;transl_table=11 PYKI01002342.1 Genbank gene 1171 1571 . + . ID=gene-C9F07_23025;Name=zipA;end_range=1571,.;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=C9F07_23025;partial=true PYKI01002342.1 Protein Homology CDS 1171 1571 . + 0 ID=cds-TGD53508.1;Parent=gene-C9F07_23025;Dbxref=NCBI_GP:TGD53508.1;Name=TGD53508.1;end_range=1571,.;gbkey=CDS;gene=zipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456965.1;locus_tag=C9F07_23025;partial=true;product=cell division protein ZipA;protein_id=TGD53508.1;transl_table=11 ##sequence-region PYKI01001343.1 1 1571 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001343.1 Genbank region 1 1571 . + . ID=PYKI01001343.1:1..1571;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001343.1 Genbank gene 1 722 . - . ID=gene-C9F07_12535;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=C9F07_12535;partial=true;start_range=.,1 PYKI01001343.1 Protein Homology CDS 1 722 . - 0 ID=cds-TGD85303.1;Parent=gene-C9F07_12535;Dbxref=NCBI_GP:TGD85303.1;Name=TGD85303.1;Note=catalyzes the formation of serine from O-phosphoserine;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458986.1;locus_tag=C9F07_12535;partial=true;product=phosphoserine phosphatase;protein_id=TGD85303.1;start_range=.,1;transl_table=11 PYKI01001343.1 Genbank gene 722 871 . - . ID=gene-C9F07_12540;Name=C9F07_12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12540 PYKI01001343.1 Protein Homology CDS 722 871 . - 0 ID=cds-TGD85304.1;Parent=gene-C9F07_12540;Dbxref=NCBI_GP:TGD85304.1;Name=TGD85304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541498.1;locus_tag=C9F07_12540;product=phosphoserine phosphatase;protein_id=TGD85304.1;transl_table=11 PYKI01001343.1 Genbank gene 839 1483 . + . ID=gene-C9F07_12545;Name=C9F07_12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12545 PYKI01001343.1 Protein Homology CDS 839 1483 . + 0 ID=cds-TGD85305.1;Parent=gene-C9F07_12545;Dbxref=NCBI_GP:TGD85305.1;Name=TGD85305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458985.1;locus_tag=C9F07_12545;product=hypothetical protein;protein_id=TGD85305.1;transl_table=11 ##sequence-region PYKI01002361.1 1 1571 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002361.1 Genbank region 1 1571 . + . ID=PYKI01002361.1:1..1571;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002361.1 Genbank gene 124 1254 . - . ID=gene-C9F07_23210;Name=C9F07_23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23210 PYKI01002361.1 Protein Homology CDS 124 1254 . - 0 ID=cds-TGD53041.1;Parent=gene-C9F07_23210;Dbxref=NCBI_GP:TGD53041.1;Name=TGD53041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455354.1;locus_tag=C9F07_23210;product=hypothetical protein;protein_id=TGD53041.1;transl_table=11 PYKI01002361.1 Genbank gene 1247 1571 . - . ID=gene-C9F07_23215;Name=C9F07_23215;end_range=1571,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23215;partial=true PYKI01002361.1 Protein Homology CDS 1247 1571 . - 1 ID=cds-TGD53042.1;Parent=gene-C9F07_23215;Dbxref=NCBI_GP:TGD53042.1;Name=TGD53042.1;end_range=1571,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455355.1;locus_tag=C9F07_23215;partial=true;product=multidrug ABC transporter ATP-binding protein;protein_id=TGD53042.1;transl_table=11 ##sequence-region PYKI01001006.1 1 1569 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001006.1 Genbank region 1 1569 . + . ID=PYKI01001006.1:1..1569;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001006.1 Genbank gene 1 469 . - . ID=gene-C9F07_09235;Name=C9F07_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09235;partial=true;start_range=.,1 PYKI01001006.1 Protein Homology CDS 1 469 . - 0 ID=cds-TGD98185.1;Parent=gene-C9F07_09235;Dbxref=NCBI_GP:TGD98185.1;Name=TGD98185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=C9F07_09235;partial=true;product=DMSO reductase;protein_id=TGD98185.1;start_range=.,1;transl_table=11 PYKI01001006.1 Genbank gene 462 1022 . - . ID=gene-C9F07_09240;Name=C9F07_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09240 PYKI01001006.1 Protein Homology CDS 462 1022 . - 0 ID=cds-TGD98183.1;Parent=gene-C9F07_09240;Dbxref=NCBI_GP:TGD98183.1;Name=TGD98183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=C9F07_09240;product=molecular chaperone;protein_id=TGD98183.1;transl_table=11 PYKI01001006.1 Genbank gene 1355 1569 . - . ID=gene-C9F07_09245;Name=C9F07_09245;end_range=1569,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09245;partial=true PYKI01001006.1 Protein Homology CDS 1355 1569 . - 2 ID=cds-TGD98184.1;Parent=gene-C9F07_09245;Dbxref=NCBI_GP:TGD98184.1;Name=TGD98184.1;end_range=1569,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=C9F07_09245;partial=true;product=alkyl hydroperoxide reductase subunit F;protein_id=TGD98184.1;transl_table=11 ##sequence-region PYKI01002203.1 1 1567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002203.1 Genbank region 1 1567 . + . ID=PYKI01002203.1:1..1567;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002203.1 Genbank gene 1 508 . - . ID=gene-C9F07_21430;Name=C9F07_21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21430;partial=true;start_range=.,1 PYKI01002203.1 Protein Homology CDS 1 508 . - 0 ID=cds-TGD56523.1;Parent=gene-C9F07_21430;Dbxref=NCBI_GP:TGD56523.1;Name=TGD56523.1;Note=2%2C3 dihydro-2%2C3 dihydroxybenzoate synthase%3B catalyzes the formation of 2%2C3 dihydro-2%2C3 dihydroxybenzoate and pyruvate from isochorismate%3B with Ent DEF is involved in enterobactin synthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455173.1;locus_tag=C9F07_21430;partial=true;product=isochorismatase;protein_id=TGD56523.1;start_range=.,1;transl_table=11 PYKI01002203.1 Genbank gene 522 1567 . - . ID=gene-C9F07_21435;Name=entE;end_range=1567,.;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=C9F07_21435;partial=true PYKI01002203.1 Protein Homology CDS 522 1567 . - 2 ID=cds-TGD56524.1;Parent=gene-C9F07_21435;Dbxref=NCBI_GP:TGD56524.1;Name=TGD56524.1;Note=bifunctional 2%2C3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase%3B activates the carboxylate group of 2%2C3-dihydroxy-benzoate forming (2%2C3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2%2C3-dihydroxy-benzoate adenylate;end_range=1567,.;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455172.1;locus_tag=C9F07_21435;partial=true;product=2%2C3-dihydroxybenzoate-AMP ligase;protein_id=TGD56524.1;transl_table=11 ##sequence-region PYKI01000603.1 1 1562 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000603.1 Genbank region 1 1562 . + . ID=PYKI01000603.1:1..1562;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000603.1 Genbank gene 1 1183 . + . ID=gene-C9F07_05155;Name=C9F07_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05155;partial=true;start_range=.,1 PYKI01000603.1 Protein Homology CDS 1 1183 . + 1 ID=cds-TGE14020.1;Parent=gene-C9F07_05155;Dbxref=NCBI_GP:TGE14020.1;Name=TGE14020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456757.1;locus_tag=C9F07_05155;partial=true;product=catecholate siderophore receptor CirA;protein_id=TGE14020.1;start_range=.,1;transl_table=11 PYKI01000603.1 Genbank gene 1227 1562 . - . ID=gene-C9F07_05160;Name=C9F07_05160;end_range=1562,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05160;partial=true PYKI01000603.1 Protein Homology CDS 1227 1562 . - 0 ID=cds-TGE14021.1;Parent=gene-C9F07_05160;Dbxref=NCBI_GP:TGE14021.1;Name=TGE14021.1;end_range=1562,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=C9F07_05160;partial=true;product=hypothetical protein;protein_id=TGE14021.1;transl_table=11 ##sequence-region PYKI01002604.1 1 1559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002604.1 Genbank region 1 1559 . + . ID=PYKI01002604.1:1..1559;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002604.1 Genbank pseudogene 1 1499 . - . ID=gene-C9F07_25855;Name=C9F07_25855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25855;pseudo=true PYKI01002604.1 Protein Homology CDS 1 1499 . - 0 ID=cds-C9F07_25855;Parent=gene-C9F07_25855;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454914.1;locus_tag=C9F07_25855;product=fimbrial assembly protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003431.1 1 1559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003431.1 Genbank region 1 1559 . + . ID=PYKI01003431.1:1..1559;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003431.1 Genbank gene 1 942 . + . ID=gene-C9F07_34465;Name=C9F07_34465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34465;partial=true;start_range=.,1 PYKI01003431.1 Protein Homology CDS 1 942 . + 0 ID=cds-TGD33536.1;Parent=gene-C9F07_34465;Dbxref=NCBI_GP:TGD33536.1;Name=TGD33536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=C9F07_34465;partial=true;product=arabinose-5-phosphate isomerase KdsD;protein_id=TGD33536.1;start_range=.,1;transl_table=11 PYKI01003431.1 Genbank gene 963 1529 . + . ID=gene-C9F07_34470;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=C9F07_34470 PYKI01003431.1 Protein Homology CDS 963 1529 . + 0 ID=cds-TGD33537.1;Parent=gene-C9F07_34470;Dbxref=NCBI_GP:TGD33537.1;Name=TGD33537.1;gbkey=CDS;gene=kdsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457695.1;locus_tag=C9F07_34470;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=TGD33537.1;transl_table=11 ##sequence-region PYKI01001294.1 1 4395 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001294.1 Genbank region 1 4395 . + . ID=PYKI01001294.1:1..4395;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001294.1 Genbank gene 1 488 . + . ID=gene-C9F07_12095;Name=C9F07_12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12095;partial=true;start_range=.,1 PYKI01001294.1 Protein Homology CDS 1 488 . + 2 ID=cds-TGD87251.1;Parent=gene-C9F07_12095;Dbxref=NCBI_GP:TGD87251.1;Name=TGD87251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000680564.1;locus_tag=C9F07_12095;partial=true;product=hypothetical protein;protein_id=TGD87251.1;start_range=.,1;transl_table=11 PYKI01001294.1 Genbank gene 506 760 . + . ID=gene-C9F07_12100;Name=C9F07_12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12100 PYKI01001294.1 Protein Homology CDS 506 760 . + 0 ID=cds-TGD87252.1;Parent=gene-C9F07_12100;Dbxref=NCBI_GP:TGD87252.1;Name=TGD87252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000719318.1;locus_tag=C9F07_12100;product=hypothetical protein;protein_id=TGD87252.1;transl_table=11 PYKI01001294.1 Genbank pseudogene 886 2592 . + . ID=gene-C9F07_12105;Name=C9F07_12105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12105;pseudo=true PYKI01001294.1 Protein Homology CDS 886 2592 . + 0 ID=cds-C9F07_12105;Parent=gene-C9F07_12105;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000214883.1;locus_tag=C9F07_12105;product=amidohydrolase;pseudo=true;transl_table=11 PYKI01001294.1 Genbank gene 2589 3734 . + . ID=gene-C9F07_12110;Name=C9F07_12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12110 PYKI01001294.1 Protein Homology CDS 2589 3734 . + 0 ID=cds-TGD87253.1;Parent=gene-C9F07_12110;Dbxref=NCBI_GP:TGD87253.1;Name=TGD87253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000643576.1;locus_tag=C9F07_12110;product=hypothetical protein;protein_id=TGD87253.1;transl_table=11 PYKI01001294.1 Genbank gene 3801 4395 . + . ID=gene-C9F07_12115;Name=C9F07_12115;end_range=4395,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12115;partial=true PYKI01001294.1 Protein Homology CDS 3801 4395 . + 0 ID=cds-TGD87254.1;Parent=gene-C9F07_12115;Dbxref=NCBI_GP:TGD87254.1;Name=TGD87254.1;end_range=4395,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663001.1;locus_tag=C9F07_12115;partial=true;product=hypothetical protein;protein_id=TGD87254.1;transl_table=11 ##sequence-region PYKI01002891.1 1 1558 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002891.1 Genbank region 1 1558 . + . ID=PYKI01002891.1:1..1558;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002891.1 Genbank gene 1 166 . - . ID=gene-C9F07_28950;Name=C9F07_28950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28950;partial=true;start_range=.,1 PYKI01002891.1 Protein Homology CDS 1 166 . - 0 ID=cds-TGD44027.1;Parent=gene-C9F07_28950;Dbxref=NCBI_GP:TGD44027.1;Name=TGD44027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=C9F07_28950;partial=true;product=peptidoglycan editing factor PgeF;protein_id=TGD44027.1;start_range=.,1;transl_table=11 PYKI01002891.1 Genbank gene 163 1143 . - . ID=gene-C9F07_28955;Name=C9F07_28955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28955 PYKI01002891.1 Protein Homology CDS 163 1143 . - 0 ID=cds-TGD44028.1;Parent=gene-C9F07_28955;Dbxref=NCBI_GP:TGD44028.1;Name=TGD44028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=C9F07_28955;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=TGD44028.1;transl_table=11 PYKI01002891.1 Genbank gene 1275 1558 . + . ID=gene-C9F07_28960;Name=C9F07_28960;end_range=1558,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28960;partial=true PYKI01002891.1 Protein Homology CDS 1275 1558 . + 0 ID=cds-TGD44029.1;Parent=gene-C9F07_28960;Dbxref=NCBI_GP:TGD44029.1;Name=TGD44029.1;end_range=1558,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457134.1;locus_tag=C9F07_28960;partial=true;product=outer membrane protein assembly factor BamD;protein_id=TGD44029.1;transl_table=11 ##sequence-region PYKI01003020.1 1 1557 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003020.1 Genbank region 1 1557 . + . ID=PYKI01003020.1:1..1557;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003020.1 Genbank gene 1 1056 . + . ID=gene-C9F07_30290;Name=C9F07_30290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30290;partial=true;start_range=.,1 PYKI01003020.1 Protein Homology CDS 1 1056 . + 0 ID=cds-TGD41136.1;Parent=gene-C9F07_30290;Dbxref=NCBI_GP:TGD41136.1;Name=TGD41136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=C9F07_30290;partial=true;product=invasin;protein_id=TGD41136.1;start_range=.,1;transl_table=11 PYKI01003020.1 Genbank gene 1083 1557 . + . ID=gene-C9F07_30295;Name=C9F07_30295;end_range=1557,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30295;partial=true PYKI01003020.1 Protein Homology CDS 1083 1557 . + 0 ID=cds-TGD41137.1;Parent=gene-C9F07_30295;Dbxref=NCBI_GP:TGD41137.1;Name=TGD41137.1;end_range=1557,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666973.1;locus_tag=C9F07_30295;partial=true;product=hypothetical protein;protein_id=TGD41137.1;transl_table=11 ##sequence-region PYKI01000350.1 1 1557 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000350.1 Genbank region 1 1557 . + . ID=PYKI01000350.1:1..1557;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000350.1 Genbank gene 1 315 . + . ID=gene-C9F07_02595;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=C9F07_02595;partial=true;start_range=.,1 PYKI01000350.1 Protein Homology CDS 1 315 . + 0 ID=cds-TGE26822.1;Parent=gene-C9F07_02595;Dbxref=NCBI_GP:TGE26822.1;Name=TGE26822.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457758.1;locus_tag=C9F07_02595;partial=true;product=sodium/panthothenate symporter;protein_id=TGE26822.1;start_range=.,1;transl_table=11 PYKI01000350.1 Genbank gene 327 1208 . + . ID=gene-C9F07_02600;Name=C9F07_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02600 PYKI01000350.1 Protein Homology CDS 327 1208 . + 0 ID=cds-TGE26823.1;Parent=gene-C9F07_02600;Dbxref=NCBI_GP:TGE26823.1;Name=TGE26823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457759.1;locus_tag=C9F07_02600;product=50S ribosomal protein L11 methyltransferase;protein_id=TGE26823.1;transl_table=11 ##sequence-region PYKI01003239.1 1 1556 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003239.1 Genbank region 1 1556 . + . ID=PYKI01003239.1:1..1556;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003239.1 Genbank gene 160 1395 . + . ID=gene-C9F07_32630;Name=C9F07_32630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32630 PYKI01003239.1 Protein Homology CDS 160 1395 . + 0 ID=cds-TGD36448.1;Parent=gene-C9F07_32630;Dbxref=NCBI_GP:TGD36448.1;Name=TGD36448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=C9F07_32630;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=TGD36448.1;transl_table=11 PYKI01003239.1 Genbank gene 1470 1556 . - . ID=gene-C9F07_32635;Name=C9F07_32635;end_range=1556,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32635;partial=true PYKI01003239.1 Protein Homology CDS 1470 1556 . - 0 ID=cds-TGD36449.1;Parent=gene-C9F07_32635;Dbxref=NCBI_GP:TGD36449.1;Name=TGD36449.1;end_range=1556,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=C9F07_32635;partial=true;product=galactoside ABC transporter permease;protein_id=TGD36449.1;transl_table=11 ##sequence-region PYKI01000330.1 1 1551 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000330.1 Genbank region 1 1551 . + . ID=PYKI01000330.1:1..1551;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000330.1 Genbank gene 1 1024 . - . ID=gene-C9F07_02370;Name=C9F07_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02370;partial=true;start_range=.,1 PYKI01000330.1 Protein Homology CDS 1 1024 . - 0 ID=cds-TGE26858.1;Parent=gene-C9F07_02370;Dbxref=NCBI_GP:TGE26858.1;Name=TGE26858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=C9F07_02370;partial=true;product=DUF445 domain-containing protein;protein_id=TGE26858.1;start_range=.,1;transl_table=11 PYKI01000330.1 Genbank pseudogene 1111 1533 . - . ID=gene-C9F07_02375;Name=C9F07_02375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02375;pseudo=true PYKI01000330.1 Protein Homology CDS 1111 1533 . - 0 ID=cds-C9F07_02375;Parent=gene-C9F07_02375;Note=is involved in resistance to acriflavine%2C chloramphenicol%2C norfloxacin%2C ethidium bromide and TPP%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458943.1;locus_tag=C9F07_02375;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01000751.1 1 1550 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000751.1 Genbank region 1 1550 . + . ID=PYKI01000751.1:1..1550;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000751.1 Genbank gene 98 889 . + . ID=gene-C9F07_06625;Name=C9F07_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06625 PYKI01000751.1 Protein Homology CDS 98 889 . + 0 ID=cds-TGE10689.1;Parent=gene-C9F07_06625;Dbxref=NCBI_GP:TGE10689.1;Name=TGE10689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455944.1;locus_tag=C9F07_06625;product=FadR family transcriptional regulator;protein_id=TGE10689.1;transl_table=11 PYKI01000751.1 Genbank pseudogene 948 1481 . - . ID=gene-C9F07_06630;Name=C9F07_06630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06630;pseudo=true PYKI01000751.1 Protein Homology CDS 948 1481 . - 0 ID=cds-C9F07_06630;Parent=gene-C9F07_06630;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455943.1;locus_tag=C9F07_06630;product=alcohol dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01002466.1 1 1549 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002466.1 Genbank region 1 1549 . + . ID=PYKI01002466.1:1..1549;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002466.1 Genbank gene 263 1108 . - . ID=gene-C9F07_24350;Name=C9F07_24350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24350 PYKI01002466.1 Protein Homology CDS 263 1108 . - 0 ID=cds-TGD50674.1;Parent=gene-C9F07_24350;Dbxref=NCBI_GP:TGD50674.1;Name=TGD50674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455834.1;locus_tag=C9F07_24350;product=hypothetical protein;protein_id=TGD50674.1;transl_table=11 PYKI01002466.1 Genbank pseudogene 1032 1269 . + . ID=gene-C9F07_24355;Name=C9F07_24355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24355;pseudo=true PYKI01002466.1 Protein Homology CDS 1032 1269 . + 0 ID=cds-C9F07_24355;Parent=gene-C9F07_24355;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664045.1;locus_tag=C9F07_24355;product=transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01000537.1 1 1549 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000537.1 Genbank region 1 1549 . + . ID=PYKI01000537.1:1..1549;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000537.1 Genbank pseudogene 67 909 . - . ID=gene-C9F07_04460;Name=C9F07_04460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04460;pseudo=true PYKI01000537.1 Protein Homology CDS 67 909 . - 0 ID=cds-C9F07_04460;Parent=gene-C9F07_04460;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457788.1;locus_tag=C9F07_04460;product=EamA family transporter;pseudo=true;transl_table=11 PYKI01000537.1 Genbank gene 990 1549 . - . ID=gene-C9F07_04465;Name=C9F07_04465;end_range=1549,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04465;partial=true PYKI01000537.1 Protein Homology CDS 990 1549 . - 2 ID=cds-TGE15709.1;Parent=gene-C9F07_04465;Dbxref=NCBI_GP:TGE15709.1;Name=TGE15709.1;end_range=1549,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457789.1;locus_tag=C9F07_04465;partial=true;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=TGE15709.1;transl_table=11 ##sequence-region PYKI01001174.1 1 1548 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001174.1 Genbank region 1 1548 . + . ID=PYKI01001174.1:1..1548;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001174.1 Genbank gene 1 454 . - . ID=gene-C9F07_10965;Name=C9F07_10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10965;partial=true;start_range=.,1 PYKI01001174.1 Protein Homology CDS 1 454 . - 0 ID=cds-TGD92758.1;Parent=gene-C9F07_10965;Dbxref=NCBI_GP:TGD92758.1;Name=TGD92758.1;Note=Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457455.1;locus_tag=C9F07_10965;partial=true;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=TGD92758.1;start_range=.,1;transl_table=11 PYKI01001174.1 Genbank gene 451 1545 . - . ID=gene-C9F07_10970;Name=C9F07_10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10970 PYKI01001174.1 Protein Homology CDS 451 1545 . - 0 ID=cds-TGD92759.1;Parent=gene-C9F07_10970;Dbxref=NCBI_GP:TGD92759.1;Name=TGD92759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539899.1;locus_tag=C9F07_10970;product=Xaa-Pro aminopeptidase;protein_id=TGD92759.1;transl_table=11 ##sequence-region PYKI01002276.1 1 4367 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002276.1 Genbank region 1 4367 . + . ID=PYKI01002276.1:1..4367;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002276.1 Genbank gene 1 422 . - . ID=gene-C9F07_22270;Name=C9F07_22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22270;partial=true;start_range=.,1 PYKI01002276.1 Protein Homology CDS 1 422 . - 0 ID=cds-TGD55035.1;Parent=gene-C9F07_22270;Dbxref=NCBI_GP:TGD55035.1;Name=TGD55035.1;Note=involved in type 1 fimbriae biosynthesis%2C interacts with FimH;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455134.1;locus_tag=C9F07_22270;partial=true;product=fimbrial chaperone protein FimC;protein_id=TGD55035.1;start_range=.,1;transl_table=11 PYKI01002276.1 Genbank gene 466 999 . - . ID=gene-C9F07_22275;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=C9F07_22275 PYKI01002276.1 Protein Homology CDS 466 999 . - 0 ID=cds-TGD55029.1;Parent=gene-C9F07_22275;Dbxref=NCBI_GP:TGD55029.1;Name=TGD55029.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=C9F07_22275;product=type 1 fimbrial protein subunit FimI;protein_id=TGD55029.1;transl_table=11 PYKI01002276.1 Genbank pseudogene 1077 1631 . - . ID=gene-C9F07_22280;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=pseudogene;locus_tag=C9F07_22280;pseudo=true PYKI01002276.1 Protein Homology CDS 1077 1631 . - 0 ID=cds-C9F07_22280;Parent=gene-C9F07_22280;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455133.1;locus_tag=C9F07_22280;product=type 1 fimbrial protein subunit FimA;pseudo=true;transl_table=11 PYKI01002276.1 Genbank gene 1621 1815 . - . ID=gene-C9F07_22285;Name=C9F07_22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22285 PYKI01002276.1 Protein Homology CDS 1621 1815 . - 0 ID=cds-TGD55030.1;Parent=gene-C9F07_22285;Dbxref=NCBI_GP:TGD55030.1;Name=TGD55030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663608.1;locus_tag=C9F07_22285;product=hypothetical protein;protein_id=TGD55030.1;transl_table=11 PYKI01002276.1 Genbank gene 2178 3044 . + . ID=gene-C9F07_22290;Name=C9F07_22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22290 PYKI01002276.1 Protein Homology CDS 2178 3044 . + 0 ID=cds-TGD55031.1;Parent=gene-C9F07_22290;Dbxref=NCBI_GP:TGD55031.1;Name=TGD55031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=C9F07_22290;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=TGD55031.1;transl_table=11 PYKI01002276.1 Genbank gene 3046 3258 . + . ID=gene-C9F07_22295;Name=C9F07_22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22295 PYKI01002276.1 Protein Homology CDS 3046 3258 . + 0 ID=cds-TGD55032.1;Parent=gene-C9F07_22295;Dbxref=NCBI_GP:TGD55032.1;Name=TGD55032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455131.1;locus_tag=C9F07_22295;product=ribosome-associated protein;protein_id=TGD55032.1;transl_table=11 PYKI01002276.1 Genbank gene 3386 3931 . + . ID=gene-C9F07_22300;Name=C9F07_22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22300 PYKI01002276.1 Protein Homology CDS 3386 3931 . + 0 ID=cds-TGD55033.1;Parent=gene-C9F07_22300;Dbxref=NCBI_GP:TGD55033.1;Name=TGD55033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459535.1;locus_tag=C9F07_22300;product=metal-dependent hydrolase;protein_id=TGD55033.1;transl_table=11 PYKI01002276.1 Genbank gene 3924 4367 . + . ID=gene-C9F07_22305;Name=C9F07_22305;end_range=4367,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22305;partial=true PYKI01002276.1 Protein Homology CDS 3924 4367 . + 0 ID=cds-TGD55034.1;Parent=gene-C9F07_22305;Dbxref=NCBI_GP:TGD55034.1;Name=TGD55034.1;end_range=4367,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459534.1;locus_tag=C9F07_22305;partial=true;product=hypothetical protein;protein_id=TGD55034.1;transl_table=11 ##sequence-region PYKI01001943.1 1 1547 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001943.1 Genbank region 1 1547 . + . ID=PYKI01001943.1:1..1547;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001943.1 Genbank gene 1 1547 . + . ID=gene-C9F07_18730;Name=C9F07_18730;end_range=1547,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18730;partial=true;start_range=.,1 PYKI01001943.1 Protein Homology CDS 1 1547 . + 1 ID=cds-TGD60643.1;Parent=gene-C9F07_18730;Dbxref=NCBI_GP:TGD60643.1;Name=TGD60643.1;end_range=1547,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000016434.1;locus_tag=C9F07_18730;partial=true;product=outer membrane usher protein PefC;protein_id=TGD60643.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001992.1 1 1547 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001992.1 Genbank region 1 1547 . + . ID=PYKI01001992.1:1..1547;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001992.1 Genbank gene 1 1547 . - . ID=gene-C9F07_19230;Name=C9F07_19230;end_range=1547,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19230;partial=true;start_range=.,1 PYKI01001992.1 Protein Homology CDS 1 1547 . - 1 ID=cds-TGD60192.1;Parent=gene-C9F07_19230;Dbxref=NCBI_GP:TGD60192.1;Name=TGD60192.1;end_range=1547,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458380.1;locus_tag=C9F07_19230;partial=true;product=1%2C4-alpha-glucan branching enzyme;protein_id=TGD60192.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002720.1 1 1546 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002720.1 Genbank region 1 1546 . + . ID=PYKI01002720.1:1..1546;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002720.1 Genbank gene 46 744 . + . ID=gene-C9F07_27120;Name=C9F07_27120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27120 PYKI01002720.1 Protein Homology CDS 46 744 . + 0 ID=cds-TGD47581.1;Parent=gene-C9F07_27120;Dbxref=NCBI_GP:TGD47581.1;Name=TGD47581.1;Note=activates Salmonella pathogenicity island 4 genes and weakly represses Salmonella pathogenicity island 1 genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001613266.1;locus_tag=C9F07_27120;product=transcriptional regulator;protein_id=TGD47581.1;transl_table=11 PYKI01002720.1 Genbank gene 905 1546 . + . ID=gene-C9F07_27125;Name=avrA;end_range=1546,.;gbkey=Gene;gene=avrA;gene_biotype=protein_coding;locus_tag=C9F07_27125;partial=true PYKI01002720.1 Protein Homology CDS 905 1546 . + 0 ID=cds-TGD47582.1;Parent=gene-C9F07_27125;Dbxref=NCBI_GP:TGD47582.1;Name=TGD47582.1;end_range=1546,.;gbkey=CDS;gene=avrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461786.1;locus_tag=C9F07_27125;partial=true;product=type III secretion system YopJ family effector AvrA;protein_id=TGD47582.1;transl_table=11 ##sequence-region PYKI01000641.1 1 1545 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000641.1 Genbank region 1 1545 . + . ID=PYKI01000641.1:1..1545;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000641.1 Genbank gene 1 208 . - . ID=gene-C9F07_05550;Name=C9F07_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05550;partial=true;start_range=.,1 PYKI01000641.1 Protein Homology CDS 1 208 . - 0 ID=cds-TGE12807.1;Parent=gene-C9F07_05550;Dbxref=NCBI_GP:TGE12807.1;Name=TGE12807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456702.1;locus_tag=C9F07_05550;partial=true;product=ADP-ribosylglycohydrolase family protein;protein_id=TGE12807.1;start_range=.,1;transl_table=11 PYKI01000641.1 Genbank gene 205 1476 . - . ID=gene-C9F07_05555;Name=C9F07_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05555 PYKI01000641.1 Protein Homology CDS 205 1476 . - 0 ID=cds-TGE12808.1;Parent=gene-C9F07_05555;Dbxref=NCBI_GP:TGE12808.1;Name=TGE12808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456701.1;locus_tag=C9F07_05555;product=MFS transporter;protein_id=TGE12808.1;transl_table=11 ##sequence-region PYKI01000998.1 1 1544 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000998.1 Genbank region 1 1544 . + . ID=PYKI01000998.1:1..1544;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000998.1 Genbank gene 105 299 . + . ID=gene-C9F07_09110;Name=C9F07_09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09110 PYKI01000998.1 Protein Homology CDS 105 299 . + 0 ID=cds-TGD98811.1;Parent=gene-C9F07_09110;Dbxref=NCBI_GP:TGD98811.1;Name=TGD98811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662993.1;locus_tag=C9F07_09110;product=hypothetical protein;protein_id=TGD98811.1;transl_table=11 PYKI01000998.1 Genbank gene 268 1452 . + . ID=gene-C9F07_09115;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=C9F07_09115 PYKI01000998.1 Protein Homology CDS 268 1452 . + 0 ID=cds-TGD98812.1;Parent=gene-C9F07_09115;Dbxref=NCBI_GP:TGD98812.1;Name=TGD98812.1;gbkey=CDS;gene=uxuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457530.1;locus_tag=C9F07_09115;product=mannonate dehydratase;protein_id=TGD98812.1;transl_table=11 ##sequence-region PYKI01002947.1 1 1544 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002947.1 Genbank region 1 1544 . + . ID=PYKI01002947.1:1..1544;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002947.1 Genbank gene 1 681 . - . ID=gene-C9F07_29530;Name=C9F07_29530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29530;partial=true;start_range=.,1 PYKI01002947.1 Protein Homology CDS 1 681 . - 0 ID=cds-TGD42304.1;Parent=gene-C9F07_29530;Dbxref=NCBI_GP:TGD42304.1;Name=TGD42304.1;Note=in Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=C9F07_29530;partial=true;product=succinate-semialdehyde dehydrogenase;protein_id=TGD42304.1;start_range=.,1;transl_table=11 PYKI01002947.1 Genbank pseudogene 862 1509 . - . ID=gene-C9F07_29535;Name=C9F07_29535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29535;pseudo=true PYKI01002947.1 Protein Homology CDS 862 1509 . - 0 ID=cds-C9F07_29535;Parent=gene-C9F07_29535;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000749997.1;locus_tag=C9F07_29535;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002747.1 1 1544 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002747.1 Genbank region 1 1544 . + . ID=PYKI01002747.1:1..1544;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002747.1 Genbank gene 138 1544 . - . ID=gene-C9F07_27425;Name=C9F07_27425;end_range=1544,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27425;partial=true PYKI01002747.1 Protein Homology CDS 138 1544 . - 0 ID=cds-TGD46989.1;Parent=gene-C9F07_27425;Dbxref=NCBI_GP:TGD46989.1;Name=TGD46989.1;end_range=1544,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455739.1;locus_tag=C9F07_27425;partial=true;product=nitrate reductase subunit alpha;protein_id=TGD46989.1;transl_table=11 ##sequence-region PYKI01002529.1 1 1543 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002529.1 Genbank region 1 1543 . + . ID=PYKI01002529.1:1..1543;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002529.1 Genbank gene 1 999 . + . ID=gene-C9F07_25100;Name=C9F07_25100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25100;partial=true;start_range=.,1 PYKI01002529.1 Protein Homology CDS 1 999 . + 0 ID=cds-TGD50049.1;Parent=gene-C9F07_25100;Dbxref=NCBI_GP:TGD50049.1;Name=TGD50049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=C9F07_25100;partial=true;product=transcriptional regulator CadC;protein_id=TGD50049.1;start_range=.,1;transl_table=11 PYKI01002529.1 Genbank gene 1360 1543 . + . ID=gene-C9F07_25105;Name=C9F07_25105;end_range=1543,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25105;partial=true PYKI01002529.1 Protein Homology CDS 1360 1543 . + 0 ID=cds-TGD50050.1;Parent=gene-C9F07_25105;Dbxref=NCBI_GP:TGD50050.1;Name=TGD50050.1;end_range=1543,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457088.1;locus_tag=C9F07_25105;partial=true;product=hypothetical protein;protein_id=TGD50050.1;transl_table=11 ##sequence-region PYKI01002551.1 1 1543 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002551.1 Genbank region 1 1543 . + . ID=PYKI01002551.1:1..1543;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002551.1 Genbank gene 33 359 . + . ID=gene-C9F07_25325;Name=C9F07_25325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25325 PYKI01002551.1 Protein Homology CDS 33 359 . + 0 ID=cds-TGD49910.1;Parent=gene-C9F07_25325;Dbxref=NCBI_GP:TGD49910.1;Name=TGD49910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456950.1;locus_tag=C9F07_25325;product=DUF2502 domain-containing protein;protein_id=TGD49910.1;transl_table=11 PYKI01002551.1 Genbank gene 420 1543 . - . ID=gene-C9F07_25330;Name=C9F07_25330;end_range=1543,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25330;partial=true PYKI01002551.1 Protein Homology CDS 420 1543 . - 2 ID=cds-TGD49911.1;Parent=gene-C9F07_25330;Dbxref=NCBI_GP:TGD49911.1;Name=TGD49911.1;end_range=1543,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456951.1;locus_tag=C9F07_25330;partial=true;product=divalent metal cation transporter;protein_id=TGD49911.1;transl_table=11 ##sequence-region PYKI01000172.1 1 1476 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000172.1 Genbank region 1 1476 . + . ID=PYKI01000172.1:1..1476;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000172.1 Genbank gene 7 747 . - . ID=gene-C9F07_01170;Name=C9F07_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01170 PYKI01000172.1 Protein Homology CDS 7 747 . - 0 ID=cds-TGE30054.1;Parent=gene-C9F07_01170;Dbxref=NCBI_GP:TGE30054.1;Name=TGE30054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133003.1;locus_tag=C9F07_01170;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=TGE30054.1;transl_table=11 PYKI01000172.1 Genbank gene 883 1476 . + . ID=gene-C9F07_01175;Name=C9F07_01175;end_range=1476,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01175;partial=true PYKI01000172.1 Protein Homology CDS 883 1476 . + 0 ID=cds-TGE30055.1;Parent=gene-C9F07_01175;Dbxref=NCBI_GP:TGE30055.1;Name=TGE30055.1;end_range=1476,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455476.1;locus_tag=C9F07_01175;partial=true;product=envelope biogenesis factor ElyC;protein_id=TGE30055.1;transl_table=11 ##sequence-region PYKI01000578.1 1 4356 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000578.1 Genbank region 1 4356 . + . ID=PYKI01000578.1:1..4356;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000578.1 Genbank gene 1 226 . - . ID=gene-C9F07_04875;Name=C9F07_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04875;partial=true;start_range=.,1 PYKI01000578.1 Protein Homology CDS 1 226 . - 0 ID=cds-TGE14437.1;Parent=gene-C9F07_04875;Dbxref=NCBI_GP:TGE14437.1;Name=TGE14437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456911.1;locus_tag=C9F07_04875;partial=true;product=aspartate-semialdehyde dehydrogenase;protein_id=TGE14437.1;start_range=.,1;transl_table=11 PYKI01000578.1 Genbank gene 294 1430 . - . ID=gene-C9F07_04880;Name=C9F07_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04880 PYKI01000578.1 Protein Homology CDS 294 1430 . - 0 ID=cds-TGE14438.1;Parent=gene-C9F07_04880;Dbxref=NCBI_GP:TGE14438.1;Name=TGE14438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456912.1;locus_tag=C9F07_04880;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=TGE14438.1;transl_table=11 PYKI01000578.1 Genbank gene 1534 2535 . + . ID=gene-C9F07_04885;Name=C9F07_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04885 PYKI01000578.1 Protein Homology CDS 1534 2535 . + 0 ID=cds-TGE14439.1;Parent=gene-C9F07_04885;Dbxref=NCBI_GP:TGE14439.1;Name=TGE14439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456913.1;locus_tag=C9F07_04885;product=flagella biosynthesis regulator;protein_id=TGE14439.1;transl_table=11 PYKI01000578.1 Genbank gene 2532 3710 . - . ID=gene-C9F07_04890;Name=C9F07_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04890 PYKI01000578.1 Protein Homology CDS 2532 3710 . - 0 ID=cds-TGE14440.1;Parent=gene-C9F07_04890;Dbxref=NCBI_GP:TGE14440.1;Name=TGE14440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=C9F07_04890;product=arabinose transporter;protein_id=TGE14440.1;transl_table=11 PYKI01000578.1 Genbank pseudogene 3890 4183 . - . ID=gene-C9F07_04895;Name=C9F07_04895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04895;pseudo=true PYKI01000578.1 Protein Homology CDS 3890 4183 . - 0 ID=cds-C9F07_04895;Parent=gene-C9F07_04895;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280167.1;locus_tag=C9F07_04895;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002589.1 1 1538 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002589.1 Genbank region 1 1538 . + . ID=PYKI01002589.1:1..1538;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002589.1 Genbank gene 1 168 . - . ID=gene-C9F07_25690;Name=C9F07_25690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25690;partial=true;start_range=.,1 PYKI01002589.1 Protein Homology CDS 1 168 . - 0 ID=cds-TGD49693.1;Parent=gene-C9F07_25690;Dbxref=NCBI_GP:TGD49693.1;Name=TGD49693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454767.1;locus_tag=C9F07_25690;partial=true;product=hypothetical protein;protein_id=TGD49693.1;start_range=.,1;transl_table=11 PYKI01002589.1 Genbank pseudogene 183 1472 . - . ID=gene-C9F07_25695;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=pseudogene;locus_tag=C9F07_25695;pseudo=true PYKI01002589.1 Protein Homology CDS 183 1472 . - 0 ID=cds-C9F07_25695;Parent=gene-C9F07_25695;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=aceE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308145.1;locus_tag=C9F07_25695;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;pseudo=true;transl_table=11 ##sequence-region PYKI01000806.1 1 1537 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000806.1 Genbank region 1 1537 . + . ID=PYKI01000806.1:1..1537;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000806.1 Genbank gene 99 1145 . - . ID=gene-C9F07_07260;Name=C9F07_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07260 PYKI01000806.1 Protein Homology CDS 99 1145 . - 0 ID=cds-TGE09129.1;Parent=gene-C9F07_07260;Dbxref=NCBI_GP:TGE09129.1;Name=TGE09129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=C9F07_07260;product=AbrB family transcriptional regulator;protein_id=TGE09129.1;transl_table=11 PYKI01000806.1 Genbank gene 1282 1537 . - . ID=gene-C9F07_07265;Name=gltA;end_range=1537,.;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=C9F07_07265;partial=true PYKI01000806.1 Protein Homology CDS 1282 1537 . - 1 ID=cds-TGE09130.1;Parent=gene-C9F07_07265;Dbxref=NCBI_GP:TGE09130.1;Name=TGE09130.1;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;end_range=1537,.;gbkey=CDS;gene=gltA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455286.1;locus_tag=C9F07_07265;partial=true;product=citrate (Si)-synthase;protein_id=TGE09130.1;transl_table=11 ##sequence-region PYKI01000408.1 1 1536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000408.1 Genbank region 1 1536 . + . ID=PYKI01000408.1:1..1536;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000408.1 Genbank gene 239 877 . + . ID=gene-C9F07_03115;Name=C9F07_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03115 PYKI01000408.1 Protein Homology CDS 239 877 . + 0 ID=cds-TGE21034.1;Parent=gene-C9F07_03115;Dbxref=NCBI_GP:TGE21034.1;Name=TGE21034.1;Note=this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458845.1;locus_tag=C9F07_03115;product=peptide-methionine (S)-S-oxide reductase;protein_id=TGE21034.1;transl_table=11 PYKI01000408.1 Genbank gene 1059 1536 . + . ID=gene-C9F07_03120;Name=C9F07_03120;end_range=1536,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03120;partial=true PYKI01000408.1 Protein Homology CDS 1059 1536 . + 0 ID=cds-TGE21035.1;Parent=gene-C9F07_03120;Dbxref=NCBI_GP:TGE21035.1;Name=TGE21035.1;end_range=1536,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458844.1;locus_tag=C9F07_03120;partial=true;product=hypothetical protein;protein_id=TGE21035.1;transl_table=11 ##sequence-region PYKI01002588.1 1 1536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002588.1 Genbank region 1 1536 . + . ID=PYKI01002588.1:1..1536;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002588.1 Genbank gene 1181 1257 . - . ID=gene-C9F07_25680;Name=C9F07_25680;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_25680 PYKI01002588.1 tRNAscan-SE tRNA 1181 1257 . - . ID=rna-C9F07_25680;Parent=gene-C9F07_25680;anticodon=(pos:complement(1221..1223));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_25680;product=tRNA-Arg PYKI01002588.1 tRNAscan-SE exon 1181 1257 . - . ID=exon-C9F07_25680-1;Parent=rna-C9F07_25680;anticodon=(pos:complement(1221..1223));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_25680;product=tRNA-Arg PYKI01002588.1 Genbank gene 1320 1535 . - . ID=gene-C9F07_25685;Name=C9F07_25685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25685 PYKI01002588.1 Protein Homology CDS 1320 1535 . - 0 ID=cds-TGD49696.1;Parent=gene-C9F07_25685;Dbxref=NCBI_GP:TGD49696.1;Name=TGD49696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539378.1;locus_tag=C9F07_25685;product=hypothetical protein;protein_id=TGD49696.1;transl_table=11 ##sequence-region PYKI01001506.1 1 1536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001506.1 Genbank region 1 1536 . + . ID=PYKI01001506.1:1..1536;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001506.1 Genbank gene 1 210 . - . ID=gene-C9F07_14340;Name=C9F07_14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14340;partial=true;start_range=.,1 PYKI01001506.1 Protein Homology CDS 1 210 . - 0 ID=cds-TGD77793.1;Parent=gene-C9F07_14340;Dbxref=NCBI_GP:TGD77793.1;Name=TGD77793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456776.1;locus_tag=C9F07_14340;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGD77793.1;start_range=.,1;transl_table=11 PYKI01001506.1 Genbank gene 212 1237 . - . ID=gene-C9F07_14345;Name=C9F07_14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14345 PYKI01001506.1 Protein Homology CDS 212 1237 . - 0 ID=cds-TGD77794.1;Parent=gene-C9F07_14345;Dbxref=NCBI_GP:TGD77794.1;Name=TGD77794.1;Note=part of the microcin C transport system;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456775.1;locus_tag=C9F07_14345;product=microcin ABC transporter permease;protein_id=TGD77794.1;transl_table=11 PYKI01001506.1 Genbank gene 1237 1536 . - . ID=gene-C9F07_14350;Name=C9F07_14350;end_range=1536,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14350;partial=true PYKI01001506.1 Protein Homology CDS 1237 1536 . - 0 ID=cds-TGD77795.1;Parent=gene-C9F07_14350;Dbxref=NCBI_GP:TGD77795.1;Name=TGD77795.1;end_range=1536,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456774.1;locus_tag=C9F07_14350;partial=true;product=microcin ABC transporter permease;protein_id=TGD77795.1;transl_table=11 ##sequence-region PYKI01002111.1 1 1531 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002111.1 Genbank region 1 1531 . + . ID=PYKI01002111.1:1..1531;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002111.1 Genbank pseudogene 65 757 . + . ID=gene-C9F07_20470;Name=C9F07_20470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20470;pseudo=true PYKI01002111.1 Protein Homology CDS 65 757 . + 0 ID=cds-C9F07_20470;Parent=gene-C9F07_20470;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002412786.1;locus_tag=C9F07_20470;product=MFS transporter;pseudo=true;transl_table=11 PYKI01002111.1 Genbank gene 860 1516 . - . ID=gene-C9F07_20475;Name=C9F07_20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20475 PYKI01002111.1 Protein Homology CDS 860 1516 . - 0 ID=cds-TGD58339.1;Parent=gene-C9F07_20475;Dbxref=NCBI_GP:TGD58339.1;Name=TGD58339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=C9F07_20475;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=TGD58339.1;transl_table=11 ##sequence-region PYKI01000808.1 1 1530 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000808.1 Genbank region 1 1530 . + . ID=PYKI01000808.1:1..1530;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000808.1 Genbank gene 1 1389 . + . ID=gene-C9F07_07275;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=C9F07_07275;partial=true;start_range=.,1 PYKI01000808.1 Protein Homology CDS 1 1389 . + 0 ID=cds-TGE09126.1;Parent=gene-C9F07_07275;Dbxref=NCBI_GP:TGE09126.1;Name=TGE09126.1;gbkey=CDS;gene=ilvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459121.1;locus_tag=C9F07_07275;partial=true;product=acetolactate synthase%2C large subunit%2C biosynthetic type;protein_id=TGE09126.1;start_range=.,1;transl_table=11 PYKI01000808.1 Genbank gene 1389 1530 . + . ID=gene-C9F07_07280;Name=ilvH;end_range=1530,.;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=C9F07_07280;partial=true PYKI01000808.1 Protein Homology CDS 1389 1530 . + 0 ID=cds-TGE09127.1;Parent=gene-C9F07_07280;Dbxref=NCBI_GP:TGE09127.1;Name=TGE09127.1;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;end_range=1530,.;gbkey=CDS;gene=ilvH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454729.1;locus_tag=C9F07_07280;partial=true;product=acetolactate synthase small subunit;protein_id=TGE09127.1;transl_table=11 ##sequence-region PYKI01002729.1 1 1530 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002729.1 Genbank region 1 1530 . + . ID=PYKI01002729.1:1..1530;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002729.1 Genbank gene 331 1530 . - . ID=gene-C9F07_27240;Name=C9F07_27240;end_range=1530,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27240;partial=true PYKI01002729.1 Protein Homology CDS 331 1530 . - 0 ID=cds-TGD47407.1;Parent=gene-C9F07_27240;Dbxref=NCBI_GP:TGD47407.1;Name=TGD47407.1;end_range=1530,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458179.1;locus_tag=C9F07_27240;partial=true;product=alpha-xylosidase;protein_id=TGD47407.1;transl_table=11 ##sequence-region PYKI01002041.1 1 1529 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002041.1 Genbank region 1 1529 . + . ID=PYKI01002041.1:1..1529;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002041.1 Genbank gene 1 772 . + . ID=gene-C9F07_19725;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=yaiC;locus_tag=C9F07_19725;partial=true;start_range=.,1 PYKI01002041.1 Protein Homology CDS 1 772 . + 1 ID=cds-TGD59993.1;Parent=gene-C9F07_19725;Dbxref=NCBI_GP:TGD59993.1;Name=TGD59993.1;Note=catalyzes the conversion of 2 GTP into c-di-GMP%3B adrA overexpression induces cellulose biosynthesis%2C cell adherence to abiotic surfaces and swimming and swarming motility%3B AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynthesis;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454980.1;locus_tag=C9F07_19725;partial=true;product=diguanylate cyclase AdrA;protein_id=TGD59993.1;start_range=.,1;transl_table=11 PYKI01002041.1 Genbank gene 787 1529 . - . ID=gene-C9F07_19730;Name=C9F07_19730;end_range=1529,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19730;partial=true PYKI01002041.1 Protein Homology CDS 787 1529 . - 2 ID=cds-TGD59994.1;Parent=gene-C9F07_19730;Dbxref=NCBI_GP:TGD59994.1;Name=TGD59994.1;end_range=1529,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454981.1;locus_tag=C9F07_19730;partial=true;product=pyrroline-5-carboxylate reductase;protein_id=TGD59994.1;transl_table=11 ##sequence-region PYKI01001895.1 1 1529 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001895.1 Genbank region 1 1529 . + . ID=PYKI01001895.1:1..1529;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001895.1 Genbank gene 1 1529 . - . ID=gene-C9F07_18275;Name=C9F07_18275;end_range=1529,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18275;partial=true;start_range=.,1 PYKI01001895.1 Protein Homology CDS 1 1529 . - 0 ID=cds-TGD61681.1;Parent=gene-C9F07_18275;Dbxref=NCBI_GP:TGD61681.1;Name=TGD61681.1;end_range=1529,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456354.1;locus_tag=C9F07_18275;partial=true;product=MCE family protein;protein_id=TGD61681.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001071.1 1 9081 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001071.1 Genbank region 1 9081 . + . ID=PYKI01001071.1:1..9081;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001071.1 Genbank gene 1 1017 . - . ID=gene-C9F07_09900;Name=C9F07_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09900;partial=true;start_range=.,1 PYKI01001071.1 Protein Homology CDS 1 1017 . - 0 ID=cds-TGD95924.1;Parent=gene-C9F07_09900;Dbxref=NCBI_GP:TGD95924.1;Name=TGD95924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=C9F07_09900;partial=true;product=UDP-glucose--(glucosyl)LPS alpha-1%2C2-glucosyltransferase;protein_id=TGD95924.1;start_range=.,1;transl_table=11 PYKI01001071.1 Genbank gene 1117 1926 . - . ID=gene-C9F07_09905;Name=C9F07_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09905 PYKI01001071.1 Protein Homology CDS 1117 1926 . - 0 ID=cds-TGD95918.1;Parent=gene-C9F07_09905;Dbxref=NCBI_GP:TGD95918.1;Name=TGD95918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458212.1;locus_tag=C9F07_09905;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=TGD95918.1;transl_table=11 PYKI01001071.1 Genbank gene 2076 2774 . - . ID=gene-C9F07_09910;Name=C9F07_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09910 PYKI01001071.1 Protein Homology CDS 2076 2774 . - 0 ID=cds-TGD95919.1;Parent=gene-C9F07_09910;Dbxref=NCBI_GP:TGD95919.1;Name=TGD95919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458211.1;locus_tag=C9F07_09910;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=TGD95919.1;transl_table=11 PYKI01001071.1 Genbank gene 2797 3810 . - . ID=gene-C9F07_09915;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=C9F07_09915 PYKI01001071.1 Protein Homology CDS 2797 3810 . - 0 ID=cds-TGD95920.1;Parent=gene-C9F07_09915;Dbxref=NCBI_GP:TGD95920.1;Name=TGD95920.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=C9F07_09915;product=lipopolysaccharide glucosyltransferase RfaJ;protein_id=TGD95920.1;transl_table=11 PYKI01001071.1 Genbank gene 3828 4841 . - . ID=gene-C9F07_09920;Name=C9F07_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09920 PYKI01001071.1 Protein Homology CDS 3828 4841 . - 0 ID=cds-TGD95921.1;Parent=gene-C9F07_09920;Dbxref=NCBI_GP:TGD95921.1;Name=TGD95921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=C9F07_09920;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=TGD95921.1;transl_table=11 PYKI01001071.1 Genbank gene 4847 5926 . - . ID=gene-C9F07_09925;Name=C9F07_09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09925 PYKI01001071.1 Protein Homology CDS 4847 5926 . - 0 ID=cds-TGD95925.1;Parent=gene-C9F07_09925;Dbxref=NCBI_GP:TGD95925.1;Name=TGD95925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=C9F07_09925;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=TGD95925.1;transl_table=11 PYKI01001071.1 Genbank gene 6012 6953 . - . ID=gene-C9F07_09930;Name=C9F07_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09930 PYKI01001071.1 Protein Homology CDS 6012 6953 . - 0 ID=cds-TGD95922.1;Parent=gene-C9F07_09930;Dbxref=NCBI_GP:TGD95922.1;Name=TGD95922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406234.1;locus_tag=C9F07_09930;product=UDP-glucose--glucosyl LPS a 1%2C 2-glucosyltransferase;protein_id=TGD95922.1;transl_table=11 PYKI01001071.1 Genbank gene 6990 7787 . - . ID=gene-C9F07_09935;Name=C9F07_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09935 PYKI01001071.1 Protein Homology CDS 6990 7787 . - 0 ID=cds-TGD95923.1;Parent=gene-C9F07_09935;Dbxref=NCBI_GP:TGD95923.1;Name=TGD95923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=C9F07_09935;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=TGD95923.1;transl_table=11 PYKI01001071.1 Genbank pseudogene 7780 8904 . - . ID=gene-C9F07_09940;Name=C9F07_09940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09940;pseudo=true PYKI01001071.1 Protein Homology CDS 7780 8904 . - 0 ID=cds-C9F07_09940;Parent=gene-C9F07_09940;Note=catalyzes the addition of the first glucose residue to the LPS core%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=C9F07_09940;product=glucosyltransferase I RfaG;pseudo=true;transl_table=11 PYKI01001071.1 Genbank pseudogene 8901 9074 . - . ID=gene-C9F07_09945;Name=C9F07_09945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09945;pseudo=true PYKI01001071.1 Protein Homology CDS 8901 9074 . - 0 ID=cds-C9F07_09945;Parent=gene-C9F07_09945;Note=catalyzes the transfer of heptose(III) to heptose(II) in the lipopolysaccharide inner core%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458203.1;locus_tag=C9F07_09945;product=lipopolysaccharide core heptosyltransferase RfaQ;pseudo=true;transl_table=11 ##sequence-region PYKI01001297.1 1 1528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001297.1 Genbank region 1 1528 . + . ID=PYKI01001297.1:1..1528;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001297.1 Genbank gene 1 1528 . + . ID=gene-C9F07_12150;Name=C9F07_12150;end_range=1528,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12150;partial=true;start_range=.,1 PYKI01001297.1 Protein Homology CDS 1 1528 . + 0 ID=cds-TGD87224.1;Parent=gene-C9F07_12150;Dbxref=NCBI_GP:TGD87224.1;Name=TGD87224.1;end_range=1528,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457751.1;locus_tag=C9F07_12150;partial=true;product=RNase E specificity factor CsrD;protein_id=TGD87224.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000901.1 1 1525 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000901.1 Genbank region 1 1525 . + . ID=PYKI01000901.1:1..1525;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000901.1 Genbank gene 1 337 . - . ID=gene-C9F07_08230;Name=C9F07_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08230;partial=true;start_range=.,1 PYKI01000901.1 Protein Homology CDS 1 337 . - 0 ID=cds-TGE03207.1;Parent=gene-C9F07_08230;Dbxref=NCBI_GP:TGE03207.1;Name=TGE03207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458794.1;locus_tag=C9F07_08230;partial=true;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=TGE03207.1;start_range=.,1;transl_table=11 PYKI01000901.1 Genbank gene 354 815 . - . ID=gene-C9F07_08235;Name=C9F07_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08235 PYKI01000901.1 Protein Homology CDS 354 815 . - 0 ID=cds-TGE03208.1;Parent=gene-C9F07_08235;Dbxref=NCBI_GP:TGE03208.1;Name=TGE03208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458793.1;locus_tag=C9F07_08235;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=TGE03208.1;transl_table=11 PYKI01000901.1 Genbank gene 787 1525 . - . ID=gene-C9F07_08240;Name=C9F07_08240;end_range=1525,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08240;partial=true PYKI01000901.1 Protein Homology CDS 787 1525 . - 1 ID=cds-TGE03209.1;Parent=gene-C9F07_08240;Dbxref=NCBI_GP:TGE03209.1;Name=TGE03209.1;end_range=1525,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=C9F07_08240;partial=true;product=NAD(P)H-hydrate dehydratase;protein_id=TGE03209.1;transl_table=11 ##sequence-region PYKI01003117.1 1 1525 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003117.1 Genbank region 1 1525 . + . ID=PYKI01003117.1:1..1525;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003117.1 Genbank gene 1 531 . + . ID=gene-C9F07_31170;Name=C9F07_31170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31170;partial=true;start_range=.,1 PYKI01003117.1 Protein Homology CDS 1 531 . + 0 ID=cds-TGD39376.1;Parent=gene-C9F07_31170;Dbxref=NCBI_GP:TGD39376.1;Name=TGD39376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456055.1;locus_tag=C9F07_31170;partial=true;product=arginine:ornithine antiporter;protein_id=TGD39376.1;start_range=.,1;transl_table=11 PYKI01003117.1 Genbank gene 593 928 . - . ID=gene-C9F07_31175;Name=C9F07_31175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31175 PYKI01003117.1 Protein Homology CDS 593 928 . - 0 ID=cds-TGD39377.1;Parent=gene-C9F07_31175;Dbxref=NCBI_GP:TGD39377.1;Name=TGD39377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456056.1;locus_tag=C9F07_31175;product=GlpM family protein;protein_id=TGD39377.1;transl_table=11 PYKI01003117.1 Genbank gene 1055 1525 . + . ID=gene-C9F07_31180;Name=C9F07_31180;end_range=1525,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31180;partial=true PYKI01003117.1 Protein Homology CDS 1055 1525 . + 0 ID=cds-TGD39378.1;Parent=gene-C9F07_31180;Dbxref=NCBI_GP:TGD39378.1;Name=TGD39378.1;Note=response regulator in two-component regulatory system with RstB;end_range=1525,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=C9F07_31180;partial=true;product=two-component system response regulator RstA;protein_id=TGD39378.1;transl_table=11 ##sequence-region PYKI01000377.1 1 1520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000377.1 Genbank region 1 1520 . + . ID=PYKI01000377.1:1..1520;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000377.1 Genbank gene 1 190 . - . ID=gene-C9F07_02850;Name=C9F07_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02850;partial=true;start_range=.,1 PYKI01000377.1 Protein Homology CDS 1 190 . - 0 ID=cds-TGE23177.1;Parent=gene-C9F07_02850;Dbxref=NCBI_GP:TGE23177.1;Name=TGE23177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576082.1;locus_tag=C9F07_02850;partial=true;product=SAM-dependent methyltransferase;protein_id=TGE23177.1;start_range=.,1;transl_table=11 PYKI01000377.1 Genbank gene 653 1520 . - . ID=gene-C9F07_02855;Name=C9F07_02855;end_range=1520,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02855;partial=true PYKI01000377.1 Protein Homology CDS 653 1520 . - 1 ID=cds-TGE23178.1;Parent=gene-C9F07_02855;Dbxref=NCBI_GP:TGE23178.1;Name=TGE23178.1;end_range=1520,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455867.1;locus_tag=C9F07_02855;partial=true;product=hypothetical protein;protein_id=TGE23178.1;transl_table=11 ##sequence-region PYKI01000924.1 1 1519 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000924.1 Genbank region 1 1519 . + . ID=PYKI01000924.1:1..1519;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000924.1 Genbank gene 1 736 . + . ID=gene-C9F07_08420;Name=C9F07_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08420;partial=true;start_range=.,1 PYKI01000924.1 Protein Homology CDS 1 736 . + 1 ID=cds-TGE02899.1;Parent=gene-C9F07_08420;Dbxref=NCBI_GP:TGE02899.1;Name=TGE02899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457111.1;locus_tag=C9F07_08420;partial=true;product=signal peptidase I;protein_id=TGE02899.1;start_range=.,1;transl_table=11 PYKI01000924.1 Genbank pseudogene 755 1066 . - . ID=gene-C9F07_08425;Name=C9F07_08425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08425;pseudo=true PYKI01000924.1 Protein Homology CDS 755 1066 . - 0 ID=cds-C9F07_08425;Parent=gene-C9F07_08425;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003838379.1;locus_tag=C9F07_08425;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000924.1 Genbank gene 1010 1519 . + . ID=gene-C9F07_08430;Name=C9F07_08430;end_range=1519,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08430;partial=true PYKI01000924.1 Protein Homology CDS 1010 1519 . + 0 ID=cds-TGE02900.1;Parent=gene-C9F07_08430;Dbxref=NCBI_GP:TGE02900.1;Name=TGE02900.1;end_range=1519,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461516.1;locus_tag=C9F07_08430;partial=true;product=ribonuclease III;protein_id=TGE02900.1;transl_table=11 ##sequence-region PYKI01001411.1 1 1517 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001411.1 Genbank region 1 1517 . + . ID=PYKI01001411.1:1..1517;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001411.1 Genbank gene 1 1281 . + . ID=gene-C9F07_13375;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=C9F07_13375;partial=true;start_range=.,1 PYKI01001411.1 Protein Homology CDS 1 1281 . + 0 ID=cds-TGD83837.1;Parent=gene-C9F07_13375;Dbxref=NCBI_GP:TGD83837.1;Name=TGD83837.1;gbkey=CDS;gene=fucI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=C9F07_13375;partial=true;product=L-fucose isomerase;protein_id=TGD83837.1;start_range=.,1;transl_table=11 PYKI01001411.1 Genbank gene 1382 1517 . + . ID=gene-C9F07_13380;Name=C9F07_13380;end_range=1517,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13380;partial=true PYKI01001411.1 Protein Homology CDS 1382 1517 . + 0 ID=cds-TGD83838.1;Parent=gene-C9F07_13380;Dbxref=NCBI_GP:TGD83838.1;Name=TGD83838.1;end_range=1517,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457372.1;locus_tag=C9F07_13380;partial=true;product=hypothetical protein;protein_id=TGD83838.1;transl_table=11 ##sequence-region PYKI01001919.1 1 1516 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001919.1 Genbank region 1 1516 . + . ID=PYKI01001919.1:1..1516;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001919.1 Genbank pseudogene 55 606 . + . ID=gene-C9F07_18470;Name=C9F07_18470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18470;pseudo=true PYKI01001919.1 Protein Homology CDS 55 606 . + 0 ID=cds-C9F07_18470;Parent=gene-C9F07_18470;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716548.1;locus_tag=C9F07_18470;product=sodium-independent anion transporter;pseudo=true;transl_table=11 PYKI01001919.1 Genbank gene 651 929 . - . ID=gene-C9F07_18475;Name=C9F07_18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18475 PYKI01001919.1 Protein Homology CDS 651 929 . - 0 ID=cds-TGD61062.1;Parent=gene-C9F07_18475;Dbxref=NCBI_GP:TGD61062.1;Name=TGD61062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=C9F07_18475;product=hypothetical protein;protein_id=TGD61062.1;transl_table=11 PYKI01001919.1 Genbank gene 1181 1516 . + . ID=gene-C9F07_18480;Name=C9F07_18480;end_range=1516,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18480;partial=true PYKI01001919.1 Protein Homology CDS 1181 1516 . + 0 ID=cds-TGD61063.1;Parent=gene-C9F07_18480;Dbxref=NCBI_GP:TGD61063.1;Name=TGD61063.1;end_range=1516,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456293.1;locus_tag=C9F07_18480;partial=true;product=aminoacyl-tRNA hydrolase;protein_id=TGD61063.1;transl_table=11 ##sequence-region PYKI01003542.1 1 1514 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003542.1 Genbank region 1 1514 . + . ID=PYKI01003542.1:1..1514;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003542.1 Genbank pseudogene 74 511 . + . ID=gene-C9F07_35750;Name=C9F07_35750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35750;pseudo=true PYKI01003542.1 Protein Homology CDS 74 511 . + 0 ID=cds-C9F07_35750;Parent=gene-C9F07_35750;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458841.1;locus_tag=C9F07_35750;product=YtfJ family protein;pseudo=true;transl_table=11 PYKI01003542.1 Genbank gene 501 1241 . - . ID=gene-C9F07_35755;Name=C9F07_35755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35755 PYKI01003542.1 Protein Homology CDS 501 1241 . - 0 ID=cds-TGD30953.1;Parent=gene-C9F07_35755;Dbxref=NCBI_GP:TGD30953.1;Name=TGD30953.1;Note=catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=C9F07_35755;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=TGD30953.1;transl_table=11 PYKI01003542.1 Genbank gene 1275 1496 . + . ID=gene-C9F07_35760;Name=C9F07_35760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35760 PYKI01003542.1 Protein Homology CDS 1275 1496 . + 0 ID=cds-TGD30954.1;Parent=gene-C9F07_35760;Dbxref=NCBI_GP:TGD30954.1;Name=TGD30954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001520310.1;locus_tag=C9F07_35760;product=hypothetical protein;protein_id=TGD30954.1;transl_table=11 ##sequence-region PYKI01000999.1 1 1513 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000999.1 Genbank region 1 1513 . + . ID=PYKI01000999.1:1..1513;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000999.1 Genbank pseudogene 62 193 . - . ID=gene-C9F07_09120;Name=C9F07_09120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09120;pseudo=true PYKI01000999.1 Protein Homology CDS 62 193 . - 0 ID=cds-C9F07_09120;Parent=gene-C9F07_09120;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015370211.1;locus_tag=C9F07_09120;product=phage tail protein;pseudo=true;transl_table=11 PYKI01000999.1 Genbank gene 205 576 . - . ID=gene-C9F07_09125;Name=C9F07_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09125 PYKI01000999.1 Protein Homology CDS 205 576 . - 0 ID=cds-TGD98561.1;Parent=gene-C9F07_09125;Dbxref=NCBI_GP:TGD98561.1;Name=TGD98561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016042206.1;locus_tag=C9F07_09125;product=phage tail protein;protein_id=TGD98561.1;transl_table=11 PYKI01000999.1 Genbank gene 604 1308 . - . ID=gene-C9F07_09130;Name=C9F07_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09130 PYKI01000999.1 Protein Homology CDS 604 1308 . - 0 ID=cds-TGD98562.1;Parent=gene-C9F07_09130;Dbxref=NCBI_GP:TGD98562.1;Name=TGD98562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015980151.1;locus_tag=C9F07_09130;product=phage tail protein;protein_id=TGD98562.1;transl_table=11 ##sequence-region PYKI01002269.1 1 1512 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002269.1 Genbank region 1 1512 . + . ID=PYKI01002269.1:1..1512;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002269.1 Genbank gene 1 279 . - . ID=gene-C9F07_22205;Name=C9F07_22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22205;partial=true;start_range=.,1 PYKI01002269.1 Protein Homology CDS 1 279 . - 0 ID=cds-TGD55203.1;Parent=gene-C9F07_22205;Dbxref=NCBI_GP:TGD55203.1;Name=TGD55203.1;Note=catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457773.1;locus_tag=C9F07_22205;partial=true;product=3-octaprenyl-4-hydroxybenzoate decarboxylase;protein_id=TGD55203.1;start_range=.,1;transl_table=11 PYKI01002269.1 Genbank gene 465 953 . + . ID=gene-C9F07_22210;Name=C9F07_22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22210 PYKI01002269.1 Protein Homology CDS 465 953 . + 0 ID=cds-TGD55201.1;Parent=gene-C9F07_22210;Dbxref=NCBI_GP:TGD55201.1;Name=TGD55201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=C9F07_22210;product=transcription/translation regulatory transformer protein RfaH;protein_id=TGD55201.1;transl_table=11 PYKI01002269.1 Genbank gene 961 1512 . - . ID=gene-C9F07_22215;Name=C9F07_22215;end_range=1512,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22215;partial=true PYKI01002269.1 Protein Homology CDS 961 1512 . - 0 ID=cds-TGD55202.1;Parent=gene-C9F07_22215;Dbxref=NCBI_GP:TGD55202.1;Name=TGD55202.1;Note=magnesium dependent%3B involved in quality control of mutated Tat exported substrates%3B not involved in the Sec-independent protein export system;end_range=1512,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457775.1;locus_tag=C9F07_22215;partial=true;product=hydrolase TatD;protein_id=TGD55202.1;transl_table=11 ##sequence-region PYKI01002506.1 1 4309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002506.1 Genbank region 1 4309 . + . ID=PYKI01002506.1:1..4309;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002506.1 Genbank gene 89 256 . + . ID=gene-C9F07_24820;Name=C9F07_24820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24820 PYKI01002506.1 Protein Homology CDS 89 256 . + 0 ID=cds-TGD50221.1;Parent=gene-C9F07_24820;Dbxref=NCBI_GP:TGD50221.1;Name=TGD50221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001546678.1;locus_tag=C9F07_24820;product=helix-turn-helix transcriptional regulator;protein_id=TGD50221.1;transl_table=11 PYKI01002506.1 Genbank gene 354 566 . + . ID=gene-C9F07_24825;Name=C9F07_24825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24825 PYKI01002506.1 Protein Homology CDS 354 566 . + 0 ID=cds-TGD50222.1;Parent=gene-C9F07_24825;Dbxref=NCBI_GP:TGD50222.1;Name=TGD50222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456140.1;locus_tag=C9F07_24825;product=fumarate hydratase FumD;protein_id=TGD50222.1;transl_table=11 PYKI01002506.1 Genbank gene 676 1635 . - . ID=gene-C9F07_24830;Name=C9F07_24830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24830 PYKI01002506.1 Protein Homology CDS 676 1635 . - 0 ID=cds-TGD50223.1;Parent=gene-C9F07_24830;Dbxref=NCBI_GP:TGD50223.1;Name=TGD50223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060725.1;locus_tag=C9F07_24830;product=DUF1722 domain-containing protein;protein_id=TGD50223.1;transl_table=11 PYKI01002506.1 Genbank gene 1807 2535 . - . ID=gene-C9F07_24835;Name=C9F07_24835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24835 PYKI01002506.1 Protein Homology CDS 1807 2535 . - 0 ID=cds-TGD50224.1;Parent=gene-C9F07_24835;Dbxref=NCBI_GP:TGD50224.1;Name=TGD50224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456138.1;locus_tag=C9F07_24835;product=helix-turn-helix-type transcriptional regulator;protein_id=TGD50224.1;transl_table=11 PYKI01002506.1 Genbank gene 2714 3352 . - . ID=gene-C9F07_24840;Name=C9F07_24840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24840 PYKI01002506.1 Protein Homology CDS 2714 3352 . - 0 ID=cds-TGD50225.1;Parent=gene-C9F07_24840;Dbxref=NCBI_GP:TGD50225.1;Name=TGD50225.1;Note=is phosphorylated by SsrA%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456137.1;locus_tag=C9F07_24840;product=DNA-binding response regulator;protein_id=TGD50225.1;transl_table=11 PYKI01002506.1 Genbank gene 3383 4309 . - . ID=gene-C9F07_24845;Name=C9F07_24845;end_range=4309,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24845;partial=true PYKI01002506.1 Protein Homology CDS 3383 4309 . - 0 ID=cds-TGD50226.1;Parent=gene-C9F07_24845;Dbxref=NCBI_GP:TGD50226.1;Name=TGD50226.1;Note=phosphorylates the response regulator SsrB%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2;end_range=4309,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456136.1;locus_tag=C9F07_24845;partial=true;product=hybrid sensor histidine kinase/response regulator;protein_id=TGD50226.1;transl_table=11 ##sequence-region PYKI01001171.1 1 1511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001171.1 Genbank region 1 1511 . + . ID=PYKI01001171.1:1..1511;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001171.1 Genbank gene 105 674 . + . ID=gene-C9F07_10935;Name=C9F07_10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10935 PYKI01001171.1 Protein Homology CDS 105 674 . + 0 ID=cds-TGD92899.1;Parent=gene-C9F07_10935;Dbxref=NCBI_GP:TGD92899.1;Name=TGD92899.1;Note=catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120208.1;locus_tag=C9F07_10935;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=TGD92899.1;transl_table=11 PYKI01001171.1 Genbank gene 652 843 . + . ID=gene-C9F07_10940;Name=C9F07_10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10940 PYKI01001171.1 Protein Homology CDS 652 843 . + 0 ID=cds-TGD92900.1;Parent=gene-C9F07_10940;Dbxref=NCBI_GP:TGD92900.1;Name=TGD92900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002430686.1;locus_tag=C9F07_10940;product=hypothetical protein;protein_id=TGD92900.1;transl_table=11 PYKI01001171.1 Genbank gene 963 1511 . + . ID=gene-C9F07_10945;Name=C9F07_10945;end_range=1511,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10945;partial=true PYKI01001171.1 Protein Homology CDS 963 1511 . + 0 ID=cds-TGD92901.1;Parent=gene-C9F07_10945;Dbxref=NCBI_GP:TGD92901.1;Name=TGD92901.1;Note=with HisPMQ is involved in the transport of histidine;end_range=1511,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=C9F07_10945;partial=true;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=TGD92901.1;transl_table=11 ##sequence-region PYKI01002781.1 1 1511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002781.1 Genbank region 1 1511 . + . ID=PYKI01002781.1:1..1511;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002781.1 Genbank gene 1 635 . - . ID=gene-C9F07_27770;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=C9F07_27770;partial=true;start_range=.,1 PYKI01002781.1 Protein Homology CDS 1 635 . - 0 ID=cds-TGD46287.1;Parent=gene-C9F07_27770;Dbxref=NCBI_GP:TGD46287.1;Name=TGD46287.1;gbkey=CDS;gene=lpxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454836.1;locus_tag=C9F07_27770;partial=true;product=lipid-A-disaccharide synthase;protein_id=TGD46287.1;start_range=.,1;transl_table=11 PYKI01002781.1 Genbank gene 635 1423 . - . ID=gene-C9F07_27775;Name=C9F07_27775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27775 PYKI01002781.1 Protein Homology CDS 635 1423 . - 0 ID=cds-TGD46285.1;Parent=gene-C9F07_27775;Dbxref=NCBI_GP:TGD46285.1;Name=TGD46285.1;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=C9F07_27775;product=acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase;protein_id=TGD46285.1;transl_table=11 PYKI01002781.1 Genbank gene 1427 1511 . - . ID=gene-C9F07_27780;Name=C9F07_27780;end_range=1511,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27780;partial=true PYKI01002781.1 Protein Homology CDS 1427 1511 . - 1 ID=cds-TGD46286.1;Parent=gene-C9F07_27780;Dbxref=NCBI_GP:TGD46286.1;Name=TGD46286.1;end_range=1511,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=C9F07_27780;partial=true;product=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ;protein_id=TGD46286.1;transl_table=11 ##sequence-region PYKI01001791.1 1 1509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001791.1 Genbank region 1 1509 . + . ID=PYKI01001791.1:1..1509;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001791.1 Genbank gene 1 740 . - . ID=gene-C9F07_17205;Name=C9F07_17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17205;partial=true;start_range=.,1 PYKI01001791.1 Protein Homology CDS 1 740 . - 0 ID=cds-TGD66657.1;Parent=gene-C9F07_17205;Dbxref=NCBI_GP:TGD66657.1;Name=TGD66657.1;Note=regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455243.1;locus_tag=C9F07_17205;partial=true;product=transcriptional regulator;protein_id=TGD66657.1;start_range=.,1;transl_table=11 PYKI01001791.1 Genbank gene 745 1509 . - . ID=gene-C9F07_17210;Name=nagA;end_range=1509,.;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=C9F07_17210;partial=true PYKI01001791.1 Protein Homology CDS 745 1509 . - 0 ID=cds-TGD66658.1;Parent=gene-C9F07_17210;Dbxref=NCBI_GP:TGD66658.1;Name=TGD66658.1;end_range=1509,.;gbkey=CDS;gene=nagA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=C9F07_17210;partial=true;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=TGD66658.1;transl_table=11 ##sequence-region PYKI01001775.1 1 1508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001775.1 Genbank region 1 1508 . + . ID=PYKI01001775.1:1..1508;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001775.1 Genbank gene 1 134 . + . ID=gene-C9F07_17045;Name=C9F07_17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17045;partial=true;start_range=.,1 PYKI01001775.1 Protein Homology CDS 1 134 . + 2 ID=cds-TGD66960.1;Parent=gene-C9F07_17045;Dbxref=NCBI_GP:TGD66960.1;Name=TGD66960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462734.1;locus_tag=C9F07_17045;partial=true;product=LysR family transcriptional regulator;protein_id=TGD66960.1;start_range=.,1;transl_table=11 PYKI01001775.1 Genbank gene 153 1508 . - . ID=gene-C9F07_17050;Name=gyrB;end_range=1508,.;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=C9F07_17050;partial=true PYKI01001775.1 Protein Homology CDS 153 1508 . - 0 ID=cds-TGD66961.1;Parent=gene-C9F07_17050;Dbxref=NCBI_GP:TGD66961.1;Name=TGD66961.1;Note=negatively supercoils closed circular double-stranded DNA;end_range=1508,.;gbkey=CDS;gene=gyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458107.1;locus_tag=C9F07_17050;partial=true;product=DNA gyrase subunit B;protein_id=TGD66961.1;transl_table=11 ##sequence-region PYKI01001536.1 1 1507 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001536.1 Genbank region 1 1507 . + . ID=PYKI01001536.1:1..1507;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001536.1 Genbank gene 1 187 . + . ID=gene-C9F07_14700;Name=C9F07_14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14700;partial=true;start_range=.,1 PYKI01001536.1 Protein Homology CDS 1 187 . + 1 ID=cds-TGD75604.1;Parent=gene-C9F07_14700;Dbxref=NCBI_GP:TGD75604.1;Name=TGD75604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456452.1;locus_tag=C9F07_14700;partial=true;product=phosphogluconate dehydratase;protein_id=TGD75604.1;start_range=.,1;transl_table=11 PYKI01001536.1 Genbank gene 225 866 . + . ID=gene-C9F07_14705;Name=C9F07_14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14705 PYKI01001536.1 Protein Homology CDS 225 866 . + 0 ID=cds-TGD75605.1;Parent=gene-C9F07_14705;Dbxref=NCBI_GP:TGD75605.1;Name=TGD75605.1;Note=catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=C9F07_14705;product=keto-deoxy-phosphogluconate aldolase;protein_id=TGD75605.1;transl_table=11 PYKI01001536.1 Genbank pseudogene 966 1507 . - . ID=gene-C9F07_14710;Name=C9F07_14710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14710;pseudo=true PYKI01001536.1 Protein Homology CDS 966 1507 . - 2 ID=cds-C9F07_14710;Parent=gene-C9F07_14710;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=C9F07_14710;product=phosphoribosylglycinamide formyltransferase 2;pseudo=true;transl_table=11 ##sequence-region PYKI01001164.1 1 1506 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001164.1 Genbank region 1 1506 . + . ID=PYKI01001164.1:1..1506;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001164.1 Genbank pseudogene 26 505 . + . ID=gene-C9F07_10875;Name=C9F07_10875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10875;pseudo=true PYKI01001164.1 Protein Homology CDS 26 505 . + 0 ID=cds-C9F07_10875;Parent=gene-C9F07_10875;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460918.3;locus_tag=C9F07_10875;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001164.1 Genbank gene 502 735 . + . ID=gene-C9F07_10880;Name=C9F07_10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10880 PYKI01001164.1 Protein Homology CDS 502 735 . + 0 ID=cds-TGD93263.1;Parent=gene-C9F07_10880;Dbxref=NCBI_GP:TGD93263.1;Name=TGD93263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=C9F07_10880;product=SirA-like protein;protein_id=TGD93263.1;transl_table=11 PYKI01001164.1 Genbank gene 1000 1386 . + . ID=gene-C9F07_10885;Name=C9F07_10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10885 PYKI01001164.1 Protein Homology CDS 1000 1386 . + 0 ID=cds-TGD93264.1;Parent=gene-C9F07_10885;Dbxref=NCBI_GP:TGD93264.1;Name=TGD93264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=C9F07_10885;product=hypothetical protein;protein_id=TGD93264.1;transl_table=11 ##sequence-region PYKI01000964.1 1 1506 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000964.1 Genbank region 1 1506 . + . ID=PYKI01000964.1:1..1506;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000964.1 Genbank gene 1 1506 . + . ID=gene-C9F07_08810;Name=mgtA;end_range=1506,.;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=C9F07_08810;partial=true;start_range=.,1 PYKI01000964.1 Protein Homology CDS 1 1506 . + 1 ID=cds-TGE00447.1;Parent=gene-C9F07_08810;Dbxref=NCBI_GP:TGE00447.1;Name=TGE00447.1;end_range=1506,.;gbkey=CDS;gene=mgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=C9F07_08810;partial=true;product=magnesium-translocating P-type ATPase;protein_id=TGE00447.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002954.1 1 1506 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002954.1 Genbank region 1 1506 . + . ID=PYKI01002954.1:1..1506;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002954.1 Genbank gene 245 418 . + . ID=gene-C9F07_29585;Name=C9F07_29585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29585 PYKI01002954.1 Protein Homology CDS 245 418 . + 0 ID=cds-TGD42103.1;Parent=gene-C9F07_29585;Dbxref=NCBI_GP:TGD42103.1;Name=TGD42103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=C9F07_29585;product=hypothetical protein;protein_id=TGD42103.1;transl_table=11 PYKI01002954.1 Genbank gene 426 1506 . + . ID=gene-C9F07_29590;Name=C9F07_29590;end_range=1506,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29590;partial=true PYKI01002954.1 Protein Homology CDS 426 1506 . + 0 ID=cds-TGD42104.1;Parent=gene-C9F07_29590;Dbxref=NCBI_GP:TGD42104.1;Name=TGD42104.1;Note=secreted by salmonella pathogenicity islands 1 and 2%3B involved in survival of Salmonella in host cells%3B interferes with host cell ubiquination pathway;end_range=1506,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=C9F07_29590;partial=true;product=E3 ubiquitin--protein ligase;protein_id=TGD42104.1;transl_table=11 ##sequence-region PYKI01003565.1 1 1506 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003565.1 Genbank region 1 1506 . + . ID=PYKI01003565.1:1..1506;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003565.1 Genbank gene 1 340 . - . ID=gene-C9F07_35990;Name=C9F07_35990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35990;partial=true;start_range=.,1 PYKI01003565.1 Protein Homology CDS 1 340 . - 0 ID=cds-TGD30462.1;Parent=gene-C9F07_35990;Dbxref=NCBI_GP:TGD30462.1;Name=TGD30462.1;Note=with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457740.1;locus_tag=C9F07_35990;partial=true;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=TGD30462.1;start_range=.,1;transl_table=11 PYKI01003565.1 Genbank gene 346 1278 . - . ID=gene-C9F07_35995;Name=C9F07_35995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35995 PYKI01003565.1 Protein Homology CDS 346 1278 . - 0 ID=cds-TGD30463.1;Parent=gene-C9F07_35995;Dbxref=NCBI_GP:TGD30463.1;Name=TGD30463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457741.1;locus_tag=C9F07_35995;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=TGD30463.1;transl_table=11 PYKI01003565.1 Genbank gene 1286 1489 . - . ID=gene-C9F07_36000;Name=C9F07_36000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36000 PYKI01003565.1 Protein Homology CDS 1286 1489 . - 0 ID=cds-TGD30464.1;Parent=gene-C9F07_36000;Dbxref=NCBI_GP:TGD30464.1;Name=TGD30464.1;Note=membrane protein AaeX%3B the gene is a member of the aaeXAB operon;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=C9F07_36000;product=transporter;protein_id=TGD30464.1;transl_table=11 ##sequence-region PYKI01001953.1 1 1505 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001953.1 Genbank region 1 1505 . + . ID=PYKI01001953.1:1..1505;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001953.1 Genbank gene 1 276 . + . ID=gene-C9F07_18845;Name=C9F07_18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18845;partial=true;start_range=.,1 PYKI01001953.1 Protein Homology CDS 1 276 . + 0 ID=cds-TGD60483.1;Parent=gene-C9F07_18845;Dbxref=NCBI_GP:TGD60483.1;Name=TGD60483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462036.1;locus_tag=C9F07_18845;partial=true;product=LysR family transcriptional regulator;protein_id=TGD60483.1;start_range=.,1;transl_table=11 PYKI01001953.1 Genbank pseudogene 324 1421 . - . ID=gene-C9F07_18850;Name=C9F07_18850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18850;pseudo=true PYKI01001953.1 Protein Homology CDS 324 1421 . - 0 ID=cds-C9F07_18850;Parent=gene-C9F07_18850;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462037.1;locus_tag=C9F07_18850;product=arylsulfatase;pseudo=true;transl_table=11 ##sequence-region PYKI01001575.1 1 1504 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001575.1 Genbank region 1 1504 . + . ID=PYKI01001575.1:1..1504;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001575.1 Genbank gene 1 228 . - . ID=gene-C9F07_15085;Name=C9F07_15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15085;partial=true;start_range=.,1 PYKI01001575.1 Protein Homology CDS 1 228 . - 0 ID=cds-TGD73190.1;Parent=gene-C9F07_15085;Dbxref=NCBI_GP:TGD73190.1;Name=TGD73190.1;Note=regulates the glyoxylate bypass operon (aceBAK)%2C which encodes isocitrate lyase%2C malate synthase and isocitrate dehydrogenase kinase/phosphorylase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458506.1;locus_tag=C9F07_15085;partial=true;product=IclR family transcriptional regulator;protein_id=TGD73190.1;start_range=.,1;transl_table=11 PYKI01001575.1 Genbank gene 448 1504 . + . ID=gene-C9F07_15090;Name=C9F07_15090;end_range=1504,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15090;partial=true PYKI01001575.1 Protein Homology CDS 448 1504 . + 0 ID=cds-TGD73191.1;Parent=gene-C9F07_15090;Dbxref=NCBI_GP:TGD73191.1;Name=TGD73191.1;end_range=1504,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463053.3;locus_tag=C9F07_15090;partial=true;product=methionine synthase;protein_id=TGD73191.1;transl_table=11 ##sequence-region PYKI01001012.1 1 1504 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001012.1 Genbank region 1 1504 . + . ID=PYKI01001012.1:1..1504;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001012.1 Genbank pseudogene 108 749 . + . ID=gene-C9F07_09280;Name=C9F07_09280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09280;pseudo=true PYKI01001012.1 Protein Homology CDS 108 749 . + 0 ID=cds-C9F07_09280;Parent=gene-C9F07_09280;Note=flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457086.1;locus_tag=C9F07_09280;product=NO-inducible flavohemoprotein;pseudo=true;transl_table=11 PYKI01001012.1 Genbank gene 931 1504 . + . ID=gene-C9F07_09285;Name=C9F07_09285;end_range=1504,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09285;partial=true PYKI01001012.1 Protein Homology CDS 931 1504 . + 0 ID=cds-TGD97848.1;Parent=gene-C9F07_09285;Dbxref=NCBI_GP:TGD97848.1;Name=TGD97848.1;Note=regulates the cadBA operon;end_range=1504,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=C9F07_09285;partial=true;product=transcriptional regulator;protein_id=TGD97848.1;transl_table=11 ##sequence-region PYKI01001754.1 1 1504 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001754.1 Genbank region 1 1504 . + . ID=PYKI01001754.1:1..1504;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001754.1 Genbank gene 1 101 . - . ID=gene-C9F07_16840;Name=C9F07_16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16840;partial=true;start_range=.,1 PYKI01001754.1 Protein Homology CDS 1 101 . - 0 ID=cds-TGD68145.1;Parent=gene-C9F07_16840;Dbxref=NCBI_GP:TGD68145.1;Name=TGD68145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521673.1;locus_tag=C9F07_16840;partial=true;product=isocitrate dehydrogenase;protein_id=TGD68145.1;start_range=.,1;transl_table=11 PYKI01001754.1 Genbank gene 355 1026 . + . ID=gene-C9F07_16845;Name=C9F07_16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16845 PYKI01001754.1 Protein Homology CDS 355 1026 . + 0 ID=cds-TGD68146.1;Parent=gene-C9F07_16845;Dbxref=NCBI_GP:TGD68146.1;Name=TGD68146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542028.1;locus_tag=C9F07_16845;product=DUF159 family protein;protein_id=TGD68146.1;transl_table=11 PYKI01001754.1 Genbank gene 1019 1504 . - . ID=gene-C9F07_16850;Name=C9F07_16850;end_range=1504,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16850;partial=true PYKI01001754.1 Protein Homology CDS 1019 1504 . - 0 ID=cds-TGD68147.1;Parent=gene-C9F07_16850;Dbxref=NCBI_GP:TGD68147.1;Name=TGD68147.1;Note=binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization;end_range=1504,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=C9F07_16850;partial=true;product=DNA polymerase V subunit UmuC;protein_id=TGD68147.1;transl_table=11 ##sequence-region PYKI01000381.1 1 1503 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000381.1 Genbank region 1 1503 . + . ID=PYKI01000381.1:1..1503;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000381.1 Genbank gene 1 341 . + . ID=gene-C9F07_02880;Name=C9F07_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02880;partial=true;start_range=.,1 PYKI01000381.1 Protein Homology CDS 1 341 . + 2 ID=cds-TGE23175.1;Parent=gene-C9F07_02880;Dbxref=NCBI_GP:TGE23175.1;Name=TGE23175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001350869.1;locus_tag=C9F07_02880;partial=true;product=formate dehydrogenase;protein_id=TGE23175.1;start_range=.,1;transl_table=11 PYKI01000381.1 Genbank pseudogene 390 1406 . + . ID=gene-C9F07_02885;Name=C9F07_02885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02885;pseudo=true PYKI01000381.1 Protein Homology CDS 390 1406 . + 0 ID=cds-C9F07_02885;Parent=gene-C9F07_02885;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004591686.1;locus_tag=C9F07_02885;product=formate dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01003090.1 1 1503 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003090.1 Genbank region 1 1503 . + . ID=PYKI01003090.1:1..1503;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003090.1 Genbank gene 1 199 . + . ID=gene-C9F07_30925;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=C9F07_30925;partial=true;start_range=.,1 PYKI01003090.1 Protein Homology CDS 1 199 . + 1 ID=cds-TGD40078.1;Parent=gene-C9F07_30925;Dbxref=NCBI_GP:TGD40078.1;Name=TGD40078.1;Note=Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space;gbkey=CDS;gene=flgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=C9F07_30925;partial=true;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=TGD40078.1;start_range=.,1;transl_table=11 PYKI01003090.1 Genbank gene 264 1503 . + . ID=gene-C9F07_30930;Name=C9F07_30930;end_range=1503,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30930;partial=true PYKI01003090.1 Protein Homology CDS 264 1503 . + 0 ID=cds-TGD40079.1;Parent=gene-C9F07_30930;Dbxref=NCBI_GP:TGD40079.1;Name=TGD40079.1;end_range=1503,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455676.1;locus_tag=C9F07_30930;partial=true;product=flagellar hook-associated protein FlgK;protein_id=TGD40079.1;transl_table=11 ##sequence-region PYKI01000961.1 1 1502 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000961.1 Genbank region 1 1502 . + . ID=PYKI01000961.1:1..1502;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000961.1 Genbank gene 1 440 . + . ID=gene-C9F07_08770;Name=C9F07_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08770;partial=true;start_range=.,1 PYKI01000961.1 Protein Homology CDS 1 440 . + 2 ID=cds-TGE00920.1;Parent=gene-C9F07_08770;Dbxref=NCBI_GP:TGE00920.1;Name=TGE00920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458114.1;locus_tag=C9F07_08770;partial=true;product=DUF4056 domain-containing protein;protein_id=TGE00920.1;start_range=.,1;transl_table=11 PYKI01000961.1 Genbank pseudogene 545 1384 . - . ID=gene-C9F07_08775;Name=C9F07_08775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08775;pseudo=true PYKI01000961.1 Protein Homology CDS 545 1384 . - 0 ID=cds-C9F07_08775;Parent=gene-C9F07_08775;Note=Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458115.1;locus_tag=C9F07_08775;product=TMAO reductase two-component system sensor histidine kinase TorS;pseudo=true;transl_table=11 ##sequence-region PYKI01003237.1 1 1502 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003237.1 Genbank region 1 1502 . + . ID=PYKI01003237.1:1..1502;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003237.1 Genbank gene 1 553 . - . ID=gene-C9F07_32600;Name=C9F07_32600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32600;partial=true;start_range=.,1 PYKI01003237.1 Protein Homology CDS 1 553 . - 0 ID=cds-TGD36481.1;Parent=gene-C9F07_32600;Dbxref=NCBI_GP:TGD36481.1;Name=TGD36481.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475716.1;locus_tag=C9F07_32600;partial=true;product=PTS glucose transporter subunit IIBC;protein_id=TGD36481.1;start_range=.,1;transl_table=11 PYKI01003237.1 Genbank gene 848 1502 . - . ID=gene-C9F07_32605;Name=C9F07_32605;end_range=1502,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32605;partial=true PYKI01003237.1 Protein Homology CDS 848 1502 . - 1 ID=cds-TGD36482.1;Parent=gene-C9F07_32605;Dbxref=NCBI_GP:TGD36482.1;Name=TGD36482.1;end_range=1502,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=C9F07_32605;partial=true;product=metal-dependent hydrolase;protein_id=TGD36482.1;transl_table=11 ##sequence-region PYKI01001048.1 1 1500 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001048.1 Genbank region 1 1500 . + . ID=PYKI01001048.1:1..1500;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001048.1 Genbank gene 1 541 . + . ID=gene-C9F07_09680;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=C9F07_09680;partial=true;start_range=.,1 PYKI01001048.1 Protein Homology CDS 1 541 . + 1 ID=cds-TGD96528.1;Parent=gene-C9F07_09680;Dbxref=NCBI_GP:TGD96528.1;Name=TGD96528.1;gbkey=CDS;gene=foxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=C9F07_09680;partial=true;product=ferrioxamine B receptor FoxA;protein_id=TGD96528.1;start_range=.,1;transl_table=11 PYKI01001048.1 Genbank gene 582 1214 . - . ID=gene-C9F07_09685;Name=C9F07_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09685 PYKI01001048.1 Protein Homology CDS 582 1214 . - 0 ID=cds-TGD96529.1;Parent=gene-C9F07_09685;Dbxref=NCBI_GP:TGD96529.1;Name=TGD96529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=C9F07_09685;product=transporter;protein_id=TGD96529.1;transl_table=11 ##sequence-region PYKI01002737.1 1 4298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002737.1 Genbank region 1 4298 . + . ID=PYKI01002737.1:1..4298;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002737.1 Genbank pseudogene 67 405 . + . ID=gene-C9F07_27300;Name=C9F07_27300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27300;pseudo=true PYKI01002737.1 Protein Homology CDS 67 405 . + 0 ID=cds-C9F07_27300;Parent=gene-C9F07_27300;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458165.1;locus_tag=C9F07_27300;product=PTS fructose transporter subunit IID;pseudo=true;transl_table=11 PYKI01002737.1 Genbank gene 409 1518 . + . ID=gene-C9F07_27305;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=C9F07_27305 PYKI01002737.1 Protein Homology CDS 409 1518 . + 0 ID=cds-TGD47245.1;Parent=gene-C9F07_27305;Dbxref=NCBI_GP:TGD47245.1;Name=TGD47245.1;gbkey=CDS;gene=dgaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=C9F07_27305;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=TGD47245.1;transl_table=11 PYKI01002737.1 Genbank gene 1505 2248 . + . ID=gene-C9F07_27310;Name=C9F07_27310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27310 PYKI01002737.1 Protein Homology CDS 1505 2248 . + 0 ID=cds-TGD47246.1;Parent=gene-C9F07_27310;Dbxref=NCBI_GP:TGD47246.1;Name=TGD47246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=C9F07_27310;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=TGD47246.1;transl_table=11 PYKI01002737.1 Genbank gene 2484 3425 . + . ID=gene-C9F07_27315;Name=C9F07_27315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27315 PYKI01002737.1 Protein Homology CDS 2484 3425 . + 0 ID=cds-TGD47247.1;Parent=gene-C9F07_27315;Dbxref=NCBI_GP:TGD47247.1;Name=TGD47247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147726.1;locus_tag=C9F07_27315;product=ISNCY family transposase;protein_id=TGD47247.1;transl_table=11 PYKI01002737.1 Genbank gene 3468 4298 . - . ID=gene-C9F07_27320;Name=C9F07_27320;end_range=4298,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27320;partial=true PYKI01002737.1 Protein Homology CDS 3468 4298 . - 0 ID=cds-TGD47248.1;Parent=gene-C9F07_27320;Dbxref=NCBI_GP:TGD47248.1;Name=TGD47248.1;end_range=4298,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458169.1;locus_tag=C9F07_27320;partial=true;product=EamA family transporter;protein_id=TGD47248.1;transl_table=11 ##sequence-region PYKI01003026.1 1 1498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003026.1 Genbank region 1 1498 . + . ID=PYKI01003026.1:1..1498;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003026.1 Genbank gene 5 1348 . + . ID=gene-C9F07_30380;Name=C9F07_30380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30380 PYKI01003026.1 Protein Homology CDS 5 1348 . + 0 ID=cds-TGD41104.1;Parent=gene-C9F07_30380;Dbxref=NCBI_GP:TGD41104.1;Name=TGD41104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124375.1;locus_tag=C9F07_30380;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=TGD41104.1;transl_table=11 PYKI01003026.1 Genbank gene 1383 1498 . + . ID=gene-C9F07_30385;Name=C9F07_30385;end_range=1498,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30385;partial=true PYKI01003026.1 Protein Homology CDS 1383 1498 . + 0 ID=cds-TGD41103.1;Parent=gene-C9F07_30385;Dbxref=NCBI_GP:TGD41103.1;Name=TGD41103.1;Note=catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA;end_range=1498,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=C9F07_30385;partial=true;product=crotonobetainyl-CoA--carnitine CoA-transferase;protein_id=TGD41103.1;transl_table=11 ##sequence-region PYKI01002657.1 1 1497 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002657.1 Genbank region 1 1497 . + . ID=PYKI01002657.1:1..1497;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002657.1 Genbank pseudogene 20 265 . + . ID=gene-C9F07_26435;Name=C9F07_26435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26435;pseudo=true PYKI01002657.1 Protein Homology CDS 20 265 . + 0 ID=cds-C9F07_26435;Parent=gene-C9F07_26435;Note=enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457832.1;locus_tag=C9F07_26435;product=ATP-dependent RNA helicase RhlB;pseudo=true;transl_table=11 PYKI01002657.1 Genbank gene 274 378 . + . ID=gene-C9F07_26440;Name=C9F07_26440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26440 PYKI01002657.1 Protein Homology CDS 274 378 . + 0 ID=cds-TGD49224.1;Parent=gene-C9F07_26440;Dbxref=NCBI_GP:TGD49224.1;Name=TGD49224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001309089.1;locus_tag=C9F07_26440;product=addiction module toxin RelE;protein_id=TGD49224.1;transl_table=11 PYKI01002657.1 Genbank gene 384 1497 . + . ID=gene-C9F07_26445;Name=C9F07_26445;end_range=1497,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26445;partial=true PYKI01002657.1 Protein Homology CDS 384 1497 . + 0 ID=cds-TGD49225.1;Parent=gene-C9F07_26445;Dbxref=NCBI_GP:TGD49225.1;Name=TGD49225.1;end_range=1497,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457833.1;locus_tag=C9F07_26445;partial=true;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=TGD49225.1;transl_table=11 ##sequence-region PYKI01002925.1 1 1494 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002925.1 Genbank region 1 1494 . + . ID=PYKI01002925.1:1..1494;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002925.1 Genbank gene 191 1494 . + . ID=gene-C9F07_29325;Name=C9F07_29325;end_range=1494,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29325;partial=true PYKI01002925.1 Protein Homology CDS 191 1494 . + 0 ID=cds-TGD43101.1;Parent=gene-C9F07_29325;Dbxref=NCBI_GP:TGD43101.1;Name=TGD43101.1;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;end_range=1494,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462193.3;locus_tag=C9F07_29325;partial=true;product=ATP-dependent RNA helicase;protein_id=TGD43101.1;transl_table=11 ##sequence-region PYKI01002252.1 1 1494 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002252.1 Genbank region 1 1494 . + . ID=PYKI01002252.1:1..1494;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002252.1 Genbank gene 1 1100 . + . ID=gene-C9F07_22010;Name=C9F07_22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22010;partial=true;start_range=.,1 PYKI01002252.1 Protein Homology CDS 1 1100 . + 2 ID=cds-TGD55740.1;Parent=gene-C9F07_22010;Dbxref=NCBI_GP:TGD55740.1;Name=TGD55740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455176.1;locus_tag=C9F07_22010;partial=true;product=carbon starvation protein A;protein_id=TGD55740.1;start_range=.,1;transl_table=11 PYKI01002252.1 Genbank gene 1164 1361 . + . ID=gene-C9F07_22015;Name=C9F07_22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22015 PYKI01002252.1 Protein Homology CDS 1164 1361 . + 0 ID=cds-TGD55741.1;Parent=gene-C9F07_22015;Dbxref=NCBI_GP:TGD55741.1;Name=TGD55741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=C9F07_22015;product=DUF466 domain-containing protein;protein_id=TGD55741.1;transl_table=11 PYKI01002252.1 Genbank gene 1397 1494 . - . ID=gene-C9F07_22020;Name=C9F07_22020;end_range=1494,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22020;partial=true PYKI01002252.1 Protein Homology CDS 1397 1494 . - 2 ID=cds-TGD55742.1;Parent=gene-C9F07_22020;Dbxref=NCBI_GP:TGD55742.1;Name=TGD55742.1;end_range=1494,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455178.1;locus_tag=C9F07_22020;partial=true;product=alcohol dehydrogenase;protein_id=TGD55742.1;transl_table=11 ##sequence-region PYKI01003383.1 1 1493 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003383.1 Genbank region 1 1493 . + . ID=PYKI01003383.1:1..1493;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003383.1 Genbank gene 44 274 . + . ID=gene-C9F07_34055;Name=C9F07_34055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34055 PYKI01003383.1 Protein Homology CDS 44 274 . + 0 ID=cds-TGD34289.1;Parent=gene-C9F07_34055;Dbxref=NCBI_GP:TGD34289.1;Name=TGD34289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001673783.1;locus_tag=C9F07_34055;product=lysine 2%2C3-aminomutase;protein_id=TGD34289.1;transl_table=11 PYKI01003383.1 Genbank gene 555 1412 . + . ID=gene-C9F07_34060;Name=C9F07_34060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34060 PYKI01003383.1 Protein Homology CDS 555 1412 . + 0 ID=cds-TGD34288.1;Parent=gene-C9F07_34060;Dbxref=NCBI_GP:TGD34288.1;Name=TGD34288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=C9F07_34060;product=hypothetical protein;protein_id=TGD34288.1;transl_table=11 ##sequence-region PYKI01001821.1 1 1491 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001821.1 Genbank region 1 1491 . + . ID=PYKI01001821.1:1..1491;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001821.1 Genbank gene 1 870 . + . ID=gene-C9F07_17520;Name=C9F07_17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17520;partial=true;start_range=.,1 PYKI01001821.1 Protein Homology CDS 1 870 . + 0 ID=cds-TGD64479.1;Parent=gene-C9F07_17520;Dbxref=NCBI_GP:TGD64479.1;Name=TGD64479.1;Note=catalyzes the formation of betaine from betaine aldehyde;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=C9F07_17520;partial=true;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=TGD64479.1;start_range=.,1;transl_table=11 PYKI01001821.1 Genbank pseudogene 872 1435 . + . ID=gene-C9F07_17525;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=pseudogene;locus_tag=C9F07_17525;pseudo=true PYKI01001821.1 Protein Homology CDS 872 1435 . + 0 ID=cds-C9F07_17525;Parent=gene-C9F07_17525;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=hpaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=C9F07_17525;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;pseudo=true;transl_table=11 ##sequence-region PYKI01003240.1 1 1491 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003240.1 Genbank region 1 1491 . + . ID=PYKI01003240.1:1..1491;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003240.1 Genbank gene 1 678 . + . ID=gene-C9F07_32640;Name=C9F07_32640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32640;partial=true;start_range=.,1 PYKI01003240.1 Protein Homology CDS 1 678 . + 0 ID=cds-TGD36429.1;Parent=gene-C9F07_32640;Dbxref=NCBI_GP:TGD36429.1;Name=TGD36429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457355.1;locus_tag=C9F07_32640;partial=true;product=glycerate kinase;protein_id=TGD36429.1;start_range=.,1;transl_table=11 PYKI01003240.1 Genbank gene 722 1491 . - . ID=gene-C9F07_32645;Name=C9F07_32645;end_range=1491,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32645;partial=true PYKI01003240.1 Protein Homology CDS 722 1491 . - 2 ID=cds-TGD36430.1;Parent=gene-C9F07_32645;Dbxref=NCBI_GP:TGD36430.1;Name=TGD36430.1;end_range=1491,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457354.1;locus_tag=C9F07_32645;partial=true;product=two-component sensor histidine kinase BarA;protein_id=TGD36430.1;transl_table=11 ##sequence-region PYKI01000359.1 1 1491 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000359.1 Genbank region 1 1491 . + . ID=PYKI01000359.1:1..1491;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000359.1 Genbank gene 1 493 . + . ID=gene-C9F07_02710;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=C9F07_02710;partial=true;start_range=.,1 PYKI01000359.1 Protein Homology CDS 1 493 . + 1 ID=cds-TGE23633.1;Parent=gene-C9F07_02710;Dbxref=NCBI_GP:TGE23633.1;Name=TGE23633.1;gbkey=CDS;gene=galT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455317.1;locus_tag=C9F07_02710;partial=true;product=galactose-1-phosphate uridylyltransferase;protein_id=TGE23633.1;start_range=.,1;transl_table=11 PYKI01000359.1 Genbank pseudogene 496 1401 . + . ID=gene-C9F07_02715;Name=C9F07_02715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02715;pseudo=true PYKI01000359.1 Protein Homology CDS 496 1401 . + 0 ID=cds-C9F07_02715;Parent=gene-C9F07_02715;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455316.1;locus_tag=C9F07_02715;product=galactokinase;pseudo=true;transl_table=11 ##sequence-region PYKI01001399.1 1 4297 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001399.1 Genbank region 1 4297 . + . ID=PYKI01001399.1:1..4297;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001399.1 Genbank gene 453 932 . - . ID=gene-C9F07_13235;Name=C9F07_13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13235 PYKI01001399.1 Protein Homology CDS 453 932 . - 0 ID=cds-TGD84037.1;Parent=gene-C9F07_13235;Dbxref=NCBI_GP:TGD84037.1;Name=TGD84037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000150780.1;locus_tag=C9F07_13235;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=TGD84037.1;transl_table=11 PYKI01001399.1 Genbank gene 929 2347 . - . ID=gene-C9F07_13240;Name=C9F07_13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13240 PYKI01001399.1 Protein Homology CDS 929 2347 . - 0 ID=cds-TGD84038.1;Parent=gene-C9F07_13240;Dbxref=NCBI_GP:TGD84038.1;Name=TGD84038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454800.1;locus_tag=C9F07_13240;product=polynucleotide adenylyltransferase;protein_id=TGD84038.1;transl_table=11 PYKI01001399.1 Genbank gene 2488 3384 . - . ID=gene-C9F07_13245;Name=C9F07_13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13245 PYKI01001399.1 Protein Homology CDS 2488 3384 . - 0 ID=cds-TGD84040.1;Parent=gene-C9F07_13245;Dbxref=NCBI_GP:TGD84040.1;Name=TGD84040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454801.1;locus_tag=C9F07_13245;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=TGD84040.1;transl_table=11 PYKI01001399.1 Genbank gene 3453 3908 . - . ID=gene-C9F07_13250;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=C9F07_13250 PYKI01001399.1 Protein Homology CDS 3453 3908 . - 0 ID=cds-TGD84039.1;Parent=gene-C9F07_13250;Dbxref=NCBI_GP:TGD84039.1;Name=TGD84039.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454802.1;locus_tag=C9F07_13250;product=RNA polymerase-binding transcription factor DksA;protein_id=TGD84039.1;transl_table=11 PYKI01001399.1 Genbank gene 4085 4297 . - . ID=gene-C9F07_13255;Name=C9F07_13255;end_range=4297,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13255;partial=true PYKI01001399.1 Protein Homology CDS 4085 4297 . - 0 ID=cds-TGD84041.1;Parent=gene-C9F07_13255;Dbxref=NCBI_GP:TGD84041.1;Name=TGD84041.1;end_range=4297,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=C9F07_13255;partial=true;product=DNA/RNA nuclease SfsA;protein_id=TGD84041.1;transl_table=11 ##sequence-region PYKI01001914.1 1 1489 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001914.1 Genbank region 1 1489 . + . ID=PYKI01001914.1:1..1489;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001914.1 Genbank gene 1 487 . - . ID=gene-C9F07_18425;Name=C9F07_18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18425;partial=true;start_range=.,1 PYKI01001914.1 Protein Homology CDS 1 487 . - 0 ID=cds-TGD61188.1;Parent=gene-C9F07_18425;Dbxref=NCBI_GP:TGD61188.1;Name=TGD61188.1;Note=is involved in the uptake of citrate and the transport of protons into the cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455250.1;locus_tag=C9F07_18425;partial=true;product=citrate-proton symporter;protein_id=TGD61188.1;start_range=.,1;transl_table=11 PYKI01001914.1 Genbank gene 538 1489 . - . ID=gene-C9F07_18430;Name=tcuB;end_range=1489,.;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=C9F07_18430;partial=true PYKI01001914.1 Protein Homology CDS 538 1489 . - 1 ID=cds-TGD61189.1;Parent=gene-C9F07_18430;Dbxref=NCBI_GP:TGD61189.1;Name=TGD61189.1;end_range=1489,.;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=C9F07_18430;partial=true;product=tricarballylate utilization protein TcuB;protein_id=TGD61189.1;transl_table=11 ##sequence-region PYKI01001764.1 1 1488 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001764.1 Genbank region 1 1488 . + . ID=PYKI01001764.1:1..1488;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001764.1 Genbank gene 1 278 . - . ID=gene-C9F07_16930;Name=C9F07_16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16930;partial=true;start_range=.,1 PYKI01001764.1 Protein Homology CDS 1 278 . - 0 ID=cds-TGD67990.1;Parent=gene-C9F07_16930;Dbxref=NCBI_GP:TGD67990.1;Name=TGD67990.1;Note=This protein is required for primosome-dependent normal DNA replication%3B it is also involved in inducing stable DNA replication during SOS response. It forms%2C in concert with dnaB protein and other prepriming proteins dnaC%2C N%2C N'%2C N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N';gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458959.1;locus_tag=C9F07_16930;partial=true;product=primosomal protein DnaI;protein_id=TGD67990.1;start_range=.,1;transl_table=11 PYKI01001764.1 Genbank gene 371 844 . - . ID=gene-C9F07_16935;Name=C9F07_16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16935 PYKI01001764.1 Protein Homology CDS 371 844 . - 0 ID=cds-TGD67991.1;Parent=gene-C9F07_16935;Dbxref=NCBI_GP:TGD67991.1;Name=TGD67991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=C9F07_16935;product=hypothetical protein;protein_id=TGD67991.1;transl_table=11 PYKI01001764.1 Genbank gene 835 1488 . - . ID=gene-C9F07_16940;Name=C9F07_16940;end_range=1488,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16940;partial=true PYKI01001764.1 Protein Homology CDS 835 1488 . - 0 ID=cds-TGD67992.1;Parent=gene-C9F07_16940;Dbxref=NCBI_GP:TGD67992.1;Name=TGD67992.1;end_range=1488,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463405.1;locus_tag=C9F07_16940;partial=true;product=hypothetical protein;protein_id=TGD67992.1;transl_table=11 ##sequence-region PYKI01000322.1 1 1487 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000322.1 Genbank region 1 1487 . + . ID=PYKI01000322.1:1..1487;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000322.1 Genbank pseudogene 1 575 . + . ID=gene-C9F07_02220;Name=C9F07_02220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02220;pseudo=true PYKI01000322.1 Protein Homology CDS 1 575 . + 2 ID=cds-C9F07_02220;Parent=gene-C9F07_02220;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=C9F07_02220;product=outer membrane protein assembly factor BamD;pseudo=true;transl_table=11 PYKI01000322.1 Genbank gene 847 1185 . + . ID=gene-C9F07_02225;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=C9F07_02225 PYKI01000322.1 Protein Homology CDS 847 1185 . + 0 ID=cds-TGE26880.1;Parent=gene-C9F07_02225;Dbxref=NCBI_GP:TGE26880.1;Name=TGE26880.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457135.1;locus_tag=C9F07_02225;product=ribosome-associated translation inhibitor RaiA;protein_id=TGE26880.1;transl_table=11 PYKI01000322.1 Genbank gene 1289 1336 . + . ID=gene-C9F07_02230;Name=C9F07_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02230 PYKI01000322.1 Protein Homology CDS 1289 1336 . + 0 ID=cds-TGE26881.1;Parent=gene-C9F07_02230;Dbxref=NCBI_GP:TGE26881.1;Name=TGE26881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457136.1;locus_tag=C9F07_02230;product=hypothetical protein;protein_id=TGE26881.1;transl_table=11 PYKI01000322.1 Genbank pseudogene 1356 1487 . + . ID=gene-C9F07_02235;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=pseudogene;locus_tag=C9F07_02235;pseudo=true PYKI01000322.1 Protein Homology CDS 1356 1487 . + 0 ID=cds-C9F07_02235;Parent=gene-C9F07_02235;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis%3B frameshifted%3B incomplete%3B missing stop;gbkey=CDS;gene=pheA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014171236.1;locus_tag=C9F07_02235;product=bifunctional chorismate mutase/prephenate dehydratase;pseudo=true;transl_table=11 ##sequence-region PYKI01002015.1 1 1487 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002015.1 Genbank region 1 1487 . + . ID=PYKI01002015.1:1..1487;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002015.1 Genbank gene 1 394 . - . ID=gene-C9F07_19430;Name=C9F07_19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19430;partial=true;start_range=.,1 PYKI01002015.1 Protein Homology CDS 1 394 . - 0 ID=cds-TGD60093.1;Parent=gene-C9F07_19430;Dbxref=NCBI_GP:TGD60093.1;Name=TGD60093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456143.1;locus_tag=C9F07_19430;partial=true;product=tetrathionate reductase subunit C;protein_id=TGD60093.1;start_range=.,1;transl_table=11 PYKI01002015.1 Genbank gene 395 1147 . - . ID=gene-C9F07_19435;Name=C9F07_19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19435 PYKI01002015.1 Protein Homology CDS 395 1147 . - 0 ID=cds-TGD60094.1;Parent=gene-C9F07_19435;Dbxref=NCBI_GP:TGD60094.1;Name=TGD60094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456142.1;locus_tag=C9F07_19435;product=tetrathionate reductase subunit TtrB;protein_id=TGD60094.1;transl_table=11 ##sequence-region PYKI01002232.1 1 1484 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002232.1 Genbank region 1 1484 . + . ID=PYKI01002232.1:1..1484;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002232.1 Genbank gene 1 113 . - . ID=gene-C9F07_21785;Name=C9F07_21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21785;partial=true;start_range=.,1 PYKI01002232.1 Protein Homology CDS 1 113 . - 0 ID=cds-TGD56191.1;Parent=gene-C9F07_21785;Dbxref=NCBI_GP:TGD56191.1;Name=TGD56191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458174.1;locus_tag=C9F07_21785;partial=true;product=transcriptional regulator;protein_id=TGD56191.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002993.1 1 1482 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002993.1 Genbank region 1 1482 . + . ID=PYKI01002993.1:1..1482;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002993.1 Genbank pseudogene 77 1024 . + . ID=gene-C9F07_30040;Name=C9F07_30040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30040;pseudo=true PYKI01002993.1 Protein Homology CDS 77 1024 . + 0 ID=cds-C9F07_30040;Parent=gene-C9F07_30040;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456102.1;locus_tag=C9F07_30040;product=Bcr/CflA family multidrug efflux MFS transporter;pseudo=true;transl_table=11 PYKI01002993.1 Genbank gene 1314 1482 . + . ID=gene-C9F07_30045;Name=C9F07_30045;end_range=1482,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30045;partial=true PYKI01002993.1 Protein Homology CDS 1314 1482 . + 0 ID=cds-TGD41321.1;Parent=gene-C9F07_30045;Dbxref=NCBI_GP:TGD41321.1;Name=TGD41321.1;Note=catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge;end_range=1482,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456103.1;locus_tag=C9F07_30045;partial=true;product=cyclopropane-fatty-acyl-phospholipid synthase;protein_id=TGD41321.1;transl_table=11 ##sequence-region PYKI01003015.1 1 1482 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003015.1 Genbank region 1 1482 . + . ID=PYKI01003015.1:1..1482;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003015.1 Genbank gene 1 314 . + . ID=gene-C9F07_30230;Name=C9F07_30230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30230;partial=true;start_range=.,1 PYKI01003015.1 Protein Homology CDS 1 314 . + 2 ID=cds-TGD41165.1;Parent=gene-C9F07_30230;Dbxref=NCBI_GP:TGD41165.1;Name=TGD41165.1;Note=response regulator in two-component regulatory system with QseC%3B regulates FlhCD which is the master regulator for flagella and motility genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457570.1;locus_tag=C9F07_30230;partial=true;product=two-component system response regulator QseB;protein_id=TGD41165.1;start_range=.,1;transl_table=11 PYKI01003015.1 Genbank gene 311 1482 . + . ID=gene-C9F07_30235;Name=C9F07_30235;end_range=1482,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30235;partial=true PYKI01003015.1 Protein Homology CDS 311 1482 . + 0 ID=cds-TGD41166.1;Parent=gene-C9F07_30235;Dbxref=NCBI_GP:TGD41166.1;Name=TGD41166.1;end_range=1482,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=C9F07_30235;partial=true;product=two-component system sensor histidine kinase QseC;protein_id=TGD41166.1;transl_table=11 ##sequence-region PYKI01001869.1 1 1482 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001869.1 Genbank region 1 1482 . + . ID=PYKI01001869.1:1..1482;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001869.1 Genbank pseudogene 1 206 . + . ID=gene-C9F07_17990;Name=C9F07_17990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17990;pseudo=true PYKI01001869.1 Protein Homology CDS 1 206 . + 2 ID=cds-C9F07_17990;Parent=gene-C9F07_17990;Note=may be involved in the transport of ethanolamine%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=C9F07_17990;product=ethanolamine utilization protein EutH;pseudo=true;transl_table=11 PYKI01001869.1 Genbank gene 203 1482 . + . ID=gene-C9F07_17995;Name=C9F07_17995;end_range=1482,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17995;partial=true PYKI01001869.1 Protein Homology CDS 203 1482 . + 0 ID=cds-TGD62721.1;Parent=gene-C9F07_17995;Dbxref=NCBI_GP:TGD62721.1;Name=TGD62721.1;end_range=1482,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=C9F07_17995;partial=true;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=TGD62721.1;transl_table=11 ##sequence-region PYKI01003024.1 1 4269 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003024.1 Genbank region 1 4269 . + . ID=PYKI01003024.1:1..4269;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003024.1 Genbank gene 1 329 . - . ID=gene-C9F07_30340;Name=C9F07_30340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30340;partial=true;start_range=.,1 PYKI01003024.1 Protein Homology CDS 1 329 . - 0 ID=cds-TGD41110.1;Parent=gene-C9F07_30340;Dbxref=NCBI_GP:TGD41110.1;Name=TGD41110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458720.1;locus_tag=C9F07_30340;partial=true;product=hypothetical protein;protein_id=TGD41110.1;start_range=.,1;transl_table=11 PYKI01003024.1 Genbank gene 374 493 . - . ID=gene-C9F07_30345;Name=C9F07_30345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30345 PYKI01003024.1 Protein Homology CDS 374 493 . - 0 ID=cds-TGD41111.1;Parent=gene-C9F07_30345;Dbxref=NCBI_GP:TGD41111.1;Name=TGD41111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001433248.1;locus_tag=C9F07_30345;product=DUF2724 domain-containing protein;protein_id=TGD41111.1;transl_table=11 PYKI01003024.1 Genbank gene 501 1010 . - . ID=gene-C9F07_30350;Name=C9F07_30350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30350 PYKI01003024.1 Protein Homology CDS 501 1010 . - 0 ID=cds-TGD41112.1;Parent=gene-C9F07_30350;Dbxref=NCBI_GP:TGD41112.1;Name=TGD41112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457853.1;locus_tag=C9F07_30350;product=hypothetical protein;protein_id=TGD41112.1;transl_table=11 PYKI01003024.1 Genbank gene 1043 1264 . - . ID=gene-C9F07_30355;Name=C9F07_30355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30355 PYKI01003024.1 Protein Homology CDS 1043 1264 . - 0 ID=cds-TGD41113.1;Parent=gene-C9F07_30355;Dbxref=NCBI_GP:TGD41113.1;Name=TGD41113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457852.1;locus_tag=C9F07_30355;product=regulator;protein_id=TGD41113.1;transl_table=11 PYKI01003024.1 Genbank gene 1360 1950 . + . ID=gene-C9F07_30360;Name=C9F07_30360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30360 PYKI01003024.1 Protein Homology CDS 1360 1950 . + 0 ID=cds-TGD41114.1;Parent=gene-C9F07_30360;Dbxref=NCBI_GP:TGD41114.1;Name=TGD41114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201301.1;locus_tag=C9F07_30360;product=phage repressor protein;protein_id=TGD41114.1;transl_table=11 PYKI01003024.1 Genbank gene 1969 3966 . + . ID=gene-C9F07_30365;Name=C9F07_30365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30365 PYKI01003024.1 Protein Homology CDS 1969 3966 . + 0 ID=cds-TGD41115.1;Parent=gene-C9F07_30365;Dbxref=NCBI_GP:TGD41115.1;Name=TGD41115.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13175.4;locus_tag=C9F07_30365;product=hypothetical protein;protein_id=TGD41115.1;transl_table=11 PYKI01003024.1 Genbank gene 4047 4269 . + . ID=gene-C9F07_30370;Name=C9F07_30370;end_range=4269,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30370;partial=true PYKI01003024.1 Protein Homology CDS 4047 4269 . + 0 ID=cds-TGD41116.1;Parent=gene-C9F07_30370;Dbxref=NCBI_GP:TGD41116.1;Name=TGD41116.1;end_range=4269,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457849.1;locus_tag=C9F07_30370;partial=true;product=integrase;protein_id=TGD41116.1;transl_table=11 ##sequence-region PYKI01001009.1 1 1481 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001009.1 Genbank region 1 1481 . + . ID=PYKI01001009.1:1..1481;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001009.1 Genbank gene 1 184 . + . ID=gene-C9F07_09260;Name=C9F07_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09260;partial=true;start_range=.,1 PYKI01001009.1 Protein Homology CDS 1 184 . + 1 ID=cds-TGD98120.1;Parent=gene-C9F07_09260;Dbxref=NCBI_GP:TGD98120.1;Name=TGD98120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458854.1;locus_tag=C9F07_09260;partial=true;product=hypothetical protein;protein_id=TGD98120.1;start_range=.,1;transl_table=11 PYKI01001009.1 Genbank gene 291 1415 . - . ID=gene-C9F07_09265;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=C9F07_09265 PYKI01001009.1 Protein Homology CDS 291 1415 . - 0 ID=cds-TGD98121.1;Parent=gene-C9F07_09265;Dbxref=NCBI_GP:TGD98121.1;Name=TGD98121.1;gbkey=CDS;gene=mpl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001722013.1;locus_tag=C9F07_09265;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=TGD98121.1;transl_table=11 ##sequence-region PYKI01000479.1 1 1480 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000479.1 Genbank region 1 1480 . + . ID=PYKI01000479.1:1..1480;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000479.1 Genbank pseudogene 1 190 . - . ID=gene-C9F07_03835;Name=C9F07_03835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03835;pseudo=true PYKI01000479.1 Protein Homology CDS 1 190 . - 0 ID=cds-C9F07_03835;Parent=gene-C9F07_03835;Note=involved in the regulation of length and mediates adhesion%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=C9F07_03835;product=fimbrial protein;pseudo=true;transl_table=11 PYKI01000479.1 Genbank gene 191 1480 . - . ID=gene-C9F07_03840;Name=C9F07_03840;end_range=1480,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03840;partial=true PYKI01000479.1 Protein Homology CDS 191 1480 . - 0 ID=cds-TGE19008.1;Parent=gene-C9F07_03840;Dbxref=NCBI_GP:TGE19008.1;Name=TGE19008.1;Note=involved in fimbria production;end_range=1480,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=C9F07_03840;partial=true;product=outer membrane usher protein;protein_id=TGE19008.1;transl_table=11 ##sequence-region PYKI01003098.1 1 1480 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003098.1 Genbank region 1 1480 . + . ID=PYKI01003098.1:1..1480;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003098.1 Genbank gene 1 441 . - . ID=gene-C9F07_30995;Name=C9F07_30995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30995;partial=true;start_range=.,1 PYKI01003098.1 Protein Homology CDS 1 441 . - 0 ID=cds-TGD39799.1;Parent=gene-C9F07_30995;Dbxref=NCBI_GP:TGD39799.1;Name=TGD39799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461862.1;locus_tag=C9F07_30995;partial=true;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=TGD39799.1;start_range=.,1;transl_table=11 PYKI01003098.1 Genbank gene 455 1003 . - . ID=gene-C9F07_31000;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;locus_tag=C9F07_31000 PYKI01003098.1 Protein Homology CDS 455 1003 . - 0 ID=cds-TGD39800.1;Parent=gene-C9F07_31000;Dbxref=NCBI_GP:TGD39800.1;Name=TGD39800.1;gbkey=CDS;gene=casB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461863.1;locus_tag=C9F07_31000;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=TGD39800.1;transl_table=11 PYKI01003098.1 Genbank gene 1000 1480 . - . ID=gene-C9F07_31005;Name=casA;end_range=1480,.;gbkey=Gene;gene=casA;gene_biotype=protein_coding;locus_tag=C9F07_31005;partial=true PYKI01003098.1 Protein Homology CDS 1000 1480 . - 1 ID=cds-TGD39801.1;Parent=gene-C9F07_31005;Dbxref=NCBI_GP:TGD39801.1;Name=TGD39801.1;end_range=1480,.;gbkey=CDS;gene=casA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461864.1;locus_tag=C9F07_31005;partial=true;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=TGD39801.1;transl_table=11 ##sequence-region PYKI01001818.1 1 1479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001818.1 Genbank region 1 1479 . + . ID=PYKI01001818.1:1..1479;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001818.1 Genbank gene 1 172 . + . ID=gene-C9F07_17475;Name=C9F07_17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17475;partial=true;start_range=.,1 PYKI01001818.1 Protein Homology CDS 1 172 . + 1 ID=cds-TGD64882.1;Parent=gene-C9F07_17475;Dbxref=NCBI_GP:TGD64882.1;Name=TGD64882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=C9F07_17475;partial=true;product=reverse transcriptase;protein_id=TGD64882.1;start_range=.,1;transl_table=11 PYKI01001818.1 Genbank pseudogene 233 1456 . + . ID=gene-C9F07_17480;Name=C9F07_17480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17480;pseudo=true PYKI01001818.1 Protein Homology CDS 233 1456 . + 0 ID=cds-C9F07_17480;Parent=gene-C9F07_17480;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455854.1;locus_tag=C9F07_17480;product=pyruvate-flavodoxin oxidoreductase;pseudo=true;transl_table=11 ##sequence-region PYKI01002520.1 1 1410 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002520.1 Genbank region 1 1410 . + . ID=PYKI01002520.1:1..1410;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002520.1 Genbank gene 3 185 . - . ID=gene-C9F07_24975;Name=C9F07_24975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24975 PYKI01002520.1 Protein Homology CDS 3 185 . - 0 ID=cds-TGD50123.1;Parent=gene-C9F07_24975;Dbxref=NCBI_GP:TGD50123.1;Name=TGD50123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003841701.1;locus_tag=C9F07_24975;product=hypothetical protein;protein_id=TGD50123.1;transl_table=11 PYKI01002520.1 Genbank gene 351 563 . + . ID=gene-C9F07_24980;Name=C9F07_24980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24980 PYKI01002520.1 GeneMarkS+ CDS 351 563 . + 0 ID=cds-TGD50124.1;Parent=gene-C9F07_24980;Dbxref=NCBI_GP:TGD50124.1;Name=TGD50124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F07_24980;product=hypothetical protein;protein_id=TGD50124.1;transl_table=11 PYKI01002520.1 Genbank gene 602 913 . - . ID=gene-C9F07_24985;Name=C9F07_24985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24985 PYKI01002520.1 Protein Homology CDS 602 913 . - 0 ID=cds-TGD50125.1;Parent=gene-C9F07_24985;Dbxref=NCBI_GP:TGD50125.1;Name=TGD50125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001552342.1;locus_tag=C9F07_24985;product=hypothetical protein;protein_id=TGD50125.1;transl_table=11 PYKI01002520.1 Genbank gene 959 1410 . - . ID=gene-C9F07_24990;Name=C9F07_24990;end_range=1410,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24990;partial=true PYKI01002520.1 Protein Homology CDS 959 1410 . - 2 ID=cds-TGD50126.1;Parent=gene-C9F07_24990;Dbxref=NCBI_GP:TGD50126.1;Name=TGD50126.1;end_range=1410,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000526060.1;locus_tag=C9F07_24990;partial=true;product=phage tail tape measure protein;protein_id=TGD50126.1;transl_table=11 ##sequence-region PYKI01000513.1 1 1477 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000513.1 Genbank region 1 1477 . + . ID=PYKI01000513.1:1..1477;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000513.1 Genbank gene 1 302 . - . ID=gene-C9F07_04245;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=C9F07_04245;partial=true;start_range=.,1 PYKI01000513.1 Protein Homology CDS 1 302 . - 0 ID=cds-TGE16690.1;Parent=gene-C9F07_04245;Dbxref=NCBI_GP:TGE16690.1;Name=TGE16690.1;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;gbkey=CDS;gene=queA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454999.1;locus_tag=C9F07_04245;partial=true;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=TGE16690.1;start_range=.,1;transl_table=11 PYKI01000513.1 Genbank gene 396 977 . + . ID=gene-C9F07_04250;Name=C9F07_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04250 PYKI01000513.1 Protein Homology CDS 396 977 . + 0 ID=cds-TGE16688.1;Parent=gene-C9F07_04250;Dbxref=NCBI_GP:TGE16688.1;Name=TGE16688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454998.1;locus_tag=C9F07_04250;product=ACP phosphodiesterase;protein_id=TGE16688.1;transl_table=11 PYKI01000513.1 Genbank gene 1187 1477 . + . ID=gene-C9F07_04255;Name=C9F07_04255;end_range=1477,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04255;partial=true PYKI01000513.1 Protein Homology CDS 1187 1477 . + 0 ID=cds-TGE16689.1;Parent=gene-C9F07_04255;Dbxref=NCBI_GP:TGE16689.1;Name=TGE16689.1;end_range=1477,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818745.1;locus_tag=C9F07_04255;partial=true;product=peroxiredoxin;protein_id=TGE16689.1;transl_table=11 ##sequence-region PYKI01001412.1 1 1476 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001412.1 Genbank region 1 1476 . + . ID=PYKI01001412.1:1..1476;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001412.1 Genbank gene 39 263 . + . ID=gene-C9F07_13385;Name=C9F07_13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13385 PYKI01001412.1 Protein Homology CDS 39 263 . + 0 ID=cds-TGD83833.1;Parent=gene-C9F07_13385;Dbxref=NCBI_GP:TGD83833.1;Name=TGD83833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166251.1;locus_tag=C9F07_13385;product=ribbon-helix-helix protein%2C CopG family;protein_id=TGD83833.1;transl_table=11 PYKI01001412.1 Genbank gene 372 611 . + . ID=gene-C9F07_13390;Name=C9F07_13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13390 PYKI01001412.1 Protein Homology CDS 372 611 . + 0 ID=cds-TGD83834.1;Parent=gene-C9F07_13390;Dbxref=NCBI_GP:TGD83834.1;Name=TGD83834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118105.1;locus_tag=C9F07_13390;product=antitoxin;protein_id=TGD83834.1;transl_table=11 PYKI01001412.1 Genbank gene 614 922 . + . ID=gene-C9F07_13395;Name=C9F07_13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13395 PYKI01001412.1 Protein Homology CDS 614 922 . + 0 ID=cds-TGD83835.1;Parent=gene-C9F07_13395;Dbxref=NCBI_GP:TGD83835.1;Name=TGD83835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199743.1;locus_tag=C9F07_13395;product=cytotoxin;protein_id=TGD83835.1;transl_table=11 PYKI01001412.1 Genbank pseudogene 1345 1476 . + . ID=gene-C9F07_13400;Name=C9F07_13400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13400;pseudo=true PYKI01001412.1 Protein Homology CDS 1345 1476 . + 0 ID=cds-C9F07_13400;Parent=gene-C9F07_13400;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463347.1;locus_tag=C9F07_13400;product=integrase;pseudo=true;transl_table=11 ##sequence-region PYKI01000307.1 1 1476 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000307.1 Genbank region 1 1476 . + . ID=PYKI01000307.1:1..1476;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000307.1 Genbank gene 1 1174 . + . ID=gene-C9F07_02075;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=C9F07_02075;partial=true;start_range=.,1 PYKI01000307.1 Protein Homology CDS 1 1174 . + 1 ID=cds-TGE27781.1;Parent=gene-C9F07_02075;Dbxref=NCBI_GP:TGE27781.1;Name=TGE27781.1;gbkey=CDS;gene=bcsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458298.1;locus_tag=C9F07_02075;partial=true;product=cellulose biosynthesis protein BcsE;protein_id=TGE27781.1;start_range=.,1;transl_table=11 PYKI01000307.1 Genbank gene 1171 1362 . + . ID=gene-C9F07_02080;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=C9F07_02080 PYKI01000307.1 Protein Homology CDS 1171 1362 . + 0 ID=cds-TGE27782.1;Parent=gene-C9F07_02080;Dbxref=NCBI_GP:TGE27782.1;Name=TGE27782.1;gbkey=CDS;gene=bcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458297.1;locus_tag=C9F07_02080;product=cellulose biosynthesis protein BcsF;protein_id=TGE27782.1;transl_table=11 PYKI01000307.1 Genbank pseudogene 1359 1448 . + . ID=gene-C9F07_02085;Name=C9F07_02085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02085;pseudo=true PYKI01000307.1 Protein Homology CDS 1359 1448 . + 0 ID=cds-C9F07_02085;Parent=gene-C9F07_02085;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458296.1;locus_tag=C9F07_02085;product=cellulose biosynthesis protein BcsG;pseudo=true;transl_table=11 ##sequence-region PYKI01003132.1 1 1474 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003132.1 Genbank region 1 1474 . + . ID=PYKI01003132.1:1..1474;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003132.1 Genbank gene 1 155 . + . ID=gene-C9F07_31360;Name=C9F07_31360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31360;partial=true;start_range=.,1 PYKI01003132.1 Protein Homology CDS 1 155 . + 2 ID=cds-TGD38942.1;Parent=gene-C9F07_31360;Dbxref=NCBI_GP:TGD38942.1;Name=TGD38942.1;Note=catalyzes the hydrolysis of acylphosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455581.1;locus_tag=C9F07_31360;partial=true;product=acylphosphatase;protein_id=TGD38942.1;start_range=.,1;transl_table=11 PYKI01003132.1 Genbank gene 152 481 . - . ID=gene-C9F07_31365;Name=C9F07_31365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31365 PYKI01003132.1 Protein Homology CDS 152 481 . - 0 ID=cds-TGD38943.1;Parent=gene-C9F07_31365;Dbxref=NCBI_GP:TGD38943.1;Name=TGD38943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455582.1;locus_tag=C9F07_31365;product=sulfurtransferase TusE;protein_id=TGD38943.1;transl_table=11 PYKI01003132.1 Genbank gene 568 1227 . - . ID=gene-C9F07_31370;Name=C9F07_31370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31370 PYKI01003132.1 Protein Homology CDS 568 1227 . - 0 ID=cds-TGD38944.1;Parent=gene-C9F07_31370;Dbxref=NCBI_GP:TGD38944.1;Name=TGD38944.1;Note=binds to the HflBKC complex which modulates FtsH activity;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455583.1;locus_tag=C9F07_31370;product=transmembrane protein;protein_id=TGD38944.1;transl_table=11 ##sequence-region PYKI01000500.1 1 4267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000500.1 Genbank region 1 4267 . + . ID=PYKI01000500.1:1..4267;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000500.1 Genbank gene 1 876 . - . ID=gene-C9F07_04050;Name=C9F07_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04050;partial=true;start_range=.,1 PYKI01000500.1 Protein Homology CDS 1 876 . - 0 ID=cds-TGE17326.1;Parent=gene-C9F07_04050;Dbxref=NCBI_GP:TGE17326.1;Name=TGE17326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=C9F07_04050;partial=true;product=lipoprotein NlpI;protein_id=TGE17326.1;start_range=.,1;transl_table=11 PYKI01000500.1 Genbank gene 986 3121 . - . ID=gene-C9F07_04055;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=C9F07_04055 PYKI01000500.1 Protein Homology CDS 986 3121 . - 0 ID=cds-TGE17329.1;Parent=gene-C9F07_04055;Dbxref=NCBI_GP:TGE17329.1;Name=TGE17329.1;gbkey=CDS;gene=pnp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=C9F07_04055;product=polyribonucleotide nucleotidyltransferase;protein_id=TGE17329.1;transl_table=11 PYKI01000500.1 Genbank gene 3363 3632 . - . ID=gene-C9F07_04060;Name=C9F07_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04060 PYKI01000500.1 Protein Homology CDS 3363 3632 . - 0 ID=cds-TGE17327.1;Parent=gene-C9F07_04060;Dbxref=NCBI_GP:TGE17327.1;Name=TGE17327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=C9F07_04060;product=30S ribosomal protein S15;protein_id=TGE17327.1;transl_table=11 PYKI01000500.1 Genbank gene 3783 4267 . - . ID=gene-C9F07_04065;Name=truB;end_range=4267,.;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=C9F07_04065;partial=true PYKI01000500.1 Protein Homology CDS 3783 4267 . - 2 ID=cds-TGE17328.1;Parent=gene-C9F07_04065;Dbxref=NCBI_GP:TGE17328.1;Name=TGE17328.1;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;end_range=4267,.;gbkey=CDS;gene=truB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457666.1;locus_tag=C9F07_04065;partial=true;product=tRNA pseudouridine(55) synthase TruB;protein_id=TGE17328.1;transl_table=11 ##sequence-region PYKI01001105.1 1 1470 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001105.1 Genbank region 1 1470 . + . ID=PYKI01001105.1:1..1470;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001105.1 Genbank gene 35 1470 . + . ID=gene-C9F07_10315;Name=C9F07_10315;end_range=1470,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10315;partial=true PYKI01001105.1 Protein Homology CDS 35 1470 . + 0 ID=cds-TGD95156.1;Parent=gene-C9F07_10315;Dbxref=NCBI_GP:TGD95156.1;Name=TGD95156.1;end_range=1470,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=C9F07_10315;partial=true;product=transcription-repair coupling factor;protein_id=TGD95156.1;transl_table=11 ##sequence-region PYKI01000303.1 1 1467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000303.1 Genbank region 1 1467 . + . ID=PYKI01000303.1:1..1467;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000303.1 Genbank gene 1 558 . - . ID=gene-C9F07_02010;Name=C9F07_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02010;partial=true;start_range=.,1 PYKI01000303.1 Protein Homology CDS 1 558 . - 0 ID=cds-TGE27793.1;Parent=gene-C9F07_02010;Dbxref=NCBI_GP:TGE27793.1;Name=TGE27793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457379.1;locus_tag=C9F07_02010;partial=true;product=cysteine desulfurase CsdA;protein_id=TGE27793.1;start_range=.,1;transl_table=11 PYKI01000303.1 Genbank gene 751 978 . + . ID=gene-C9F07_02015;Name=C9F07_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02015 PYKI01000303.1 Protein Homology CDS 751 978 . + 0 ID=cds-TGE27794.1;Parent=gene-C9F07_02015;Dbxref=NCBI_GP:TGE27794.1;Name=TGE27794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457378.1;locus_tag=C9F07_02015;product=YgdI/YgdR family lipoprotein;protein_id=TGE27794.1;transl_table=11 PYKI01000303.1 Genbank gene 1325 1467 . + . ID=gene-C9F07_02020;Name=C9F07_02020;end_range=1467,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02020;partial=true PYKI01000303.1 Protein Homology CDS 1325 1467 . + 0 ID=cds-TGE27795.1;Parent=gene-C9F07_02020;Dbxref=NCBI_GP:TGE27795.1;Name=TGE27795.1;end_range=1467,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=C9F07_02020;partial=true;product=LysR family transcriptional regulator;protein_id=TGE27795.1;transl_table=11 ##sequence-region PYKI01000762.1 1 1466 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000762.1 Genbank region 1 1466 . + . ID=PYKI01000762.1:1..1466;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000762.1 Genbank gene 57 941 . + . ID=gene-C9F07_06725;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=C9F07_06725 PYKI01000762.1 Protein Homology CDS 57 941 . + 0 ID=cds-TGE09244.1;Parent=gene-C9F07_06725;Dbxref=NCBI_GP:TGE09244.1;Name=TGE09244.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=C9F07_06725;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=TGE09244.1;transl_table=11 PYKI01000762.1 Genbank gene 951 1466 . + . ID=gene-C9F07_06730;Name=osmW;end_range=1466,.;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=C9F07_06730;partial=true PYKI01000762.1 Protein Homology CDS 951 1466 . + 0 ID=cds-TGE09245.1;Parent=gene-C9F07_06730;Dbxref=NCBI_GP:TGE09245.1;Name=TGE09245.1;end_range=1466,.;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504841.1;locus_tag=C9F07_06730;partial=true;product=osmoprotectant ABC transporter permease OsmW;protein_id=TGE09245.1;transl_table=11 ##sequence-region PYKI01003111.1 1 1465 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003111.1 Genbank region 1 1465 . + . ID=PYKI01003111.1:1..1465;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003111.1 Genbank gene 1 1111 . - . ID=gene-C9F07_31135;Name=C9F07_31135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31135;partial=true;start_range=.,1 PYKI01003111.1 Protein Homology CDS 1 1111 . - 0 ID=cds-TGD39567.1;Parent=gene-C9F07_31135;Dbxref=NCBI_GP:TGD39567.1;Name=TGD39567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456726.1;locus_tag=C9F07_31135;partial=true;product=beta-glucosidase BglX;protein_id=TGD39567.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002100.1 1 1464 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002100.1 Genbank region 1 1464 . + . ID=PYKI01002100.1:1..1464;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002100.1 Genbank gene 1 375 . + . ID=gene-C9F07_20385;Name=C9F07_20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20385;partial=true;start_range=.,1 PYKI01002100.1 Protein Homology CDS 1 375 . + 0 ID=cds-TGD58785.1;Parent=gene-C9F07_20385;Dbxref=NCBI_GP:TGD58785.1;Name=TGD58785.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=C9F07_20385;partial=true;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=TGD58785.1;start_range=.,1;transl_table=11 PYKI01002100.1 Genbank gene 558 1379 . - . ID=gene-C9F07_20390;Name=C9F07_20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20390 PYKI01002100.1 Protein Homology CDS 558 1379 . - 0 ID=cds-TGD58786.1;Parent=gene-C9F07_20390;Dbxref=NCBI_GP:TGD58786.1;Name=TGD58786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=C9F07_20390;product=serine O-acetyltransferase;protein_id=TGD58786.1;transl_table=11 ##sequence-region PYKI01001342.1 1 1461 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001342.1 Genbank region 1 1461 . + . ID=PYKI01001342.1:1..1461;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001342.1 Genbank pseudogene 27 344 . + . ID=gene-C9F07_12525;Name=C9F07_12525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12525;pseudo=true PYKI01001342.1 Protein Homology CDS 27 344 . + 0 ID=cds-C9F07_12525;Parent=gene-C9F07_12525;Note=low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455424.1;locus_tag=C9F07_12525;product=low-specificity L-threonine aldolase;pseudo=true;transl_table=11 PYKI01001342.1 Genbank pseudogene 355 1413 . + . ID=gene-C9F07_12530;Name=C9F07_12530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12530;pseudo=true PYKI01001342.1 Protein Homology CDS 355 1413 . + 0 ID=cds-C9F07_12530;Parent=gene-C9F07_12530;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=C9F07_12530;product=NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 ##sequence-region PYKI01002042.1 1 4264 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002042.1 Genbank region 1 4264 . + . ID=PYKI01002042.1:1..4264;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002042.1 Genbank gene 1 125 . + . ID=gene-C9F07_19735;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=C9F07_19735;partial=true;start_range=.,1 PYKI01002042.1 Protein Homology CDS 1 125 . + 2 ID=cds-TGD59987.1;Parent=gene-C9F07_19735;Dbxref=NCBI_GP:TGD59987.1;Name=TGD59987.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=C9F07_19735;partial=true;product=stringent starvation protein A;protein_id=TGD59987.1;start_range=.,1;transl_table=11 PYKI01002042.1 Genbank gene 131 631 . + . ID=gene-C9F07_19740;Name=C9F07_19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19740 PYKI01002042.1 Protein Homology CDS 131 631 . + 0 ID=cds-TGD59988.1;Parent=gene-C9F07_19740;Dbxref=NCBI_GP:TGD59988.1;Name=TGD59988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457719.1;locus_tag=C9F07_19740;product=ClpXP protease specificity-enhancing factor;protein_id=TGD59988.1;transl_table=11 PYKI01002042.1 Genbank gene 740 1531 . + . ID=gene-C9F07_19745;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=C9F07_19745 PYKI01002042.1 Protein Homology CDS 740 1531 . + 0 ID=cds-TGD59989.1;Parent=gene-C9F07_19745;Dbxref=NCBI_GP:TGD59989.1;Name=TGD59989.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457718.1;locus_tag=C9F07_19745;product=transcriptional regulator NanR;protein_id=TGD59989.1;transl_table=11 PYKI01002042.1 Genbank gene 1666 2559 . + . ID=gene-C9F07_19750;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=C9F07_19750 PYKI01002042.1 Protein Homology CDS 1666 2559 . + 0 ID=cds-TGD59990.1;Parent=gene-C9F07_19750;Dbxref=NCBI_GP:TGD59990.1;Name=TGD59990.1;gbkey=CDS;gene=nanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=C9F07_19750;product=N-acetylneuraminate lyase;protein_id=TGD59990.1;transl_table=11 PYKI01002042.1 Genbank gene 2675 4165 . + . ID=gene-C9F07_19755;Name=C9F07_19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19755 PYKI01002042.1 Protein Homology CDS 2675 4165 . + 0 ID=cds-TGD59991.1;Parent=gene-C9F07_19755;Dbxref=NCBI_GP:TGD59991.1;Name=TGD59991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457716.1;locus_tag=C9F07_19755;product=MFS transporter;protein_id=TGD59991.1;transl_table=11 ##sequence-region PYKI01001656.1 1 1459 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001656.1 Genbank region 1 1459 . + . ID=PYKI01001656.1:1..1459;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001656.1 Genbank pseudogene 101 1429 . - . ID=gene-C9F07_15810;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=pseudogene;locus_tag=C9F07_15810;pseudo=true PYKI01001656.1 Protein Homology CDS 101 1429 . - 0 ID=cds-C9F07_15810;Parent=gene-C9F07_15810;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=hrpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817194.1;locus_tag=C9F07_15810;product=ATP-dependent helicase HrpB;pseudo=true;transl_table=11 ##sequence-region PYKI01002136.1 1 1459 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002136.1 Genbank region 1 1459 . + . ID=PYKI01002136.1:1..1459;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002136.1 Genbank gene 1 312 . + . ID=gene-C9F07_20695;Name=C9F07_20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20695;partial=true;start_range=.,1 PYKI01002136.1 Protein Homology CDS 1 312 . + 0 ID=cds-TGD57829.1;Parent=gene-C9F07_20695;Dbxref=NCBI_GP:TGD57829.1;Name=TGD57829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455489.1;locus_tag=C9F07_20695;partial=true;product=hypothetical protein;protein_id=TGD57829.1;start_range=.,1;transl_table=11 PYKI01002136.1 Genbank gene 482 1459 . + . ID=gene-C9F07_20700;Name=asnS;end_range=1459,.;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=C9F07_20700;partial=true PYKI01002136.1 Protein Homology CDS 482 1459 . + 0 ID=cds-TGD57828.1;Parent=gene-C9F07_20700;Dbxref=NCBI_GP:TGD57828.1;Name=TGD57828.1;end_range=1459,.;gbkey=CDS;gene=asnS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459975.1;locus_tag=C9F07_20700;partial=true;product=asparagine--tRNA ligase;protein_id=TGD57828.1;transl_table=11 ##sequence-region PYKI01003168.1 1 1459 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003168.1 Genbank region 1 1459 . + . ID=PYKI01003168.1:1..1459;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003168.1 Genbank gene 1 922 . - . ID=gene-C9F07_31795;Name=C9F07_31795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31795;partial=true;start_range=.,1 PYKI01003168.1 Protein Homology CDS 1 922 . - 0 ID=cds-TGD37992.1;Parent=gene-C9F07_31795;Dbxref=NCBI_GP:TGD37992.1;Name=TGD37992.1;Note=constitutive%3B catalyzes the formation of cadaverine from lysine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454842.1;locus_tag=C9F07_31795;partial=true;product=lysine decarboxylase LdcC;protein_id=TGD37992.1;start_range=.,1;transl_table=11 PYKI01003168.1 Genbank pseudogene 998 1384 . - . ID=gene-C9F07_31800;Name=C9F07_31800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31800;pseudo=true PYKI01003168.1 Protein Homology CDS 998 1384 . - 0 ID=cds-C9F07_31800;Parent=gene-C9F07_31800;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454841.1;locus_tag=C9F07_31800;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000647.1 1 1459 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000647.1 Genbank region 1 1459 . + . ID=PYKI01000647.1:1..1459;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000647.1 Genbank gene 1 162 . - . ID=gene-C9F07_05595;Name=C9F07_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05595;partial=true;start_range=.,1 PYKI01000647.1 Protein Homology CDS 1 162 . - 0 ID=cds-TGE12592.1;Parent=gene-C9F07_05595;Dbxref=NCBI_GP:TGE12592.1;Name=TGE12592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457307.1;locus_tag=C9F07_05595;partial=true;product=aldolase;protein_id=TGE12592.1;start_range=.,1;transl_table=11 PYKI01000647.1 Genbank gene 159 1421 . - . ID=gene-C9F07_05600;Name=C9F07_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05600 PYKI01000647.1 Protein Homology CDS 159 1421 . - 0 ID=cds-TGE12591.1;Parent=gene-C9F07_05600;Dbxref=NCBI_GP:TGE12591.1;Name=TGE12591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=C9F07_05600;product=3-oxo-tetronate kinase;protein_id=TGE12591.1;transl_table=11 ##sequence-region PYKI01001259.1 1 1457 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001259.1 Genbank region 1 1457 . + . ID=PYKI01001259.1:1..1457;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001259.1 Genbank gene 1 581 . - . ID=gene-C9F07_11750;Name=C9F07_11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11750;partial=true;start_range=.,1 PYKI01001259.1 Protein Homology CDS 1 581 . - 0 ID=cds-TGD89474.1;Parent=gene-C9F07_11750;Dbxref=NCBI_GP:TGD89474.1;Name=TGD89474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456953.1;locus_tag=C9F07_11750;partial=true;product=hypothetical protein;protein_id=TGD89474.1;start_range=.,1;transl_table=11 PYKI01001259.1 Genbank gene 772 847 . - . ID=gene-C9F07_11755;Name=C9F07_11755;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_11755 PYKI01001259.1 tRNAscan-SE tRNA 772 847 . - . ID=rna-C9F07_11755;Parent=gene-C9F07_11755;anticodon=(pos:complement(812..814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_11755;product=tRNA-Ala PYKI01001259.1 tRNAscan-SE exon 772 847 . - . ID=exon-C9F07_11755-1;Parent=rna-C9F07_11755;anticodon=(pos:complement(812..814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_11755;product=tRNA-Ala PYKI01001259.1 Genbank gene 849 1049 . - . ID=gene-C9F07_11760;Name=C9F07_11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11760 PYKI01001259.1 Protein Homology CDS 849 1049 . - 0 ID=cds-TGD89475.1;Parent=gene-C9F07_11760;Dbxref=NCBI_GP:TGD89475.1;Name=TGD89475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001581460.1;locus_tag=C9F07_11760;product=hypothetical protein;protein_id=TGD89475.1;transl_table=11 PYKI01001259.1 Genbank gene 1069 1431 . + . ID=gene-C9F07_11765;Name=C9F07_11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11765 PYKI01001259.1 Protein Homology CDS 1069 1431 . + 0 ID=cds-TGD89476.1;Parent=gene-C9F07_11765;Dbxref=NCBI_GP:TGD89476.1;Name=TGD89476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456954.1;locus_tag=C9F07_11765;product=hypothetical protein;protein_id=TGD89476.1;transl_table=11 ##sequence-region PYKI01001522.1 1 1457 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001522.1 Genbank region 1 1457 . + . ID=PYKI01001522.1:1..1457;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001522.1 Genbank gene 1 201 . + . ID=gene-C9F07_14485;Name=C9F07_14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14485;partial=true;start_range=.,1 PYKI01001522.1 Protein Homology CDS 1 201 . + 0 ID=cds-TGD76591.1;Parent=gene-C9F07_14485;Dbxref=NCBI_GP:TGD76591.1;Name=TGD76591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454617.1;locus_tag=C9F07_14485;partial=true;product=hypothetical protein;protein_id=TGD76591.1;start_range=.,1;transl_table=11 PYKI01001522.1 Genbank gene 312 902 . + . ID=gene-C9F07_14490;Name=C9F07_14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14490 PYKI01001522.1 Protein Homology CDS 312 902 . + 0 ID=cds-TGD76592.1;Parent=gene-C9F07_14490;Dbxref=NCBI_GP:TGD76592.1;Name=TGD76592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454618.1;locus_tag=C9F07_14490;product=molybdopterin adenylyltransferase;protein_id=TGD76592.1;transl_table=11 PYKI01001522.1 Genbank gene 959 1457 . - . ID=gene-C9F07_14495;Name=C9F07_14495;end_range=1457,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14495;partial=true PYKI01001522.1 Protein Homology CDS 959 1457 . - 1 ID=cds-TGD76593.1;Parent=gene-C9F07_14495;Dbxref=NCBI_GP:TGD76593.1;Name=TGD76593.1;end_range=1457,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454619.1;locus_tag=C9F07_14495;partial=true;product=acetate uptake transporter;protein_id=TGD76593.1;transl_table=11 ##sequence-region PYKI01002914.1 1 1457 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002914.1 Genbank region 1 1457 . + . ID=PYKI01002914.1:1..1457;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002914.1 Genbank gene 1 295 . - . ID=gene-C9F07_29180;Name=C9F07_29180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29180;partial=true;start_range=.,1 PYKI01002914.1 Protein Homology CDS 1 295 . - 0 ID=cds-TGD43409.1;Parent=gene-C9F07_29180;Dbxref=NCBI_GP:TGD43409.1;Name=TGD43409.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=C9F07_29180;partial=true;product=pyridoxamine 5'-phosphate oxidase;protein_id=TGD43409.1;start_range=.,1;transl_table=11 PYKI01002914.1 Genbank gene 354 683 . - . ID=gene-C9F07_29185;Name=C9F07_29185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29185 PYKI01002914.1 Protein Homology CDS 354 683 . - 0 ID=cds-TGD43408.1;Parent=gene-C9F07_29185;Dbxref=NCBI_GP:TGD43408.1;Name=TGD43408.1;Note=MliC%3B membrane-bound lysozyme inhibitor of c-type lysozyme;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=C9F07_29185;product=lysozyme inhibitor;protein_id=TGD43408.1;transl_table=11 PYKI01002914.1 Genbank pseudogene 771 1394 . - . ID=gene-C9F07_29190;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=pseudogene;gene_synonym=ydhH;locus_tag=C9F07_29190;pseudo=true PYKI01002914.1 Protein Homology CDS 771 1394 . - 0 ID=cds-C9F07_29190;Parent=gene-C9F07_29190;Note=catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456084.1;locus_tag=C9F07_29190;product=anhydro-N-acetylmuramic acid kinase;pseudo=true;transl_table=11 ##sequence-region PYKI01003221.1 1 1455 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003221.1 Genbank region 1 1455 . + . ID=PYKI01003221.1:1..1455;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003221.1 Genbank pseudogene 76 726 . + . ID=gene-C9F07_32420;Name=secF;gbkey=Gene;gene=secF;gene_biotype=pseudogene;locus_tag=C9F07_32420;pseudo=true PYKI01003221.1 Protein Homology CDS 76 726 . + 0 ID=cds-C9F07_32420;Parent=gene-C9F07_32420;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=secF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455003.1;locus_tag=C9F07_32420;product=protein translocase subunit SecF;pseudo=true;transl_table=11 PYKI01003221.1 Genbank gene 820 1167 . + . ID=gene-C9F07_32425;Name=C9F07_32425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32425 PYKI01003221.1 Protein Homology CDS 820 1167 . + 0 ID=cds-TGD36738.1;Parent=gene-C9F07_32425;Dbxref=NCBI_GP:TGD36738.1;Name=TGD36738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455006.1;locus_tag=C9F07_32425;product=HNH endonuclease;protein_id=TGD36738.1;transl_table=11 PYKI01003221.1 Genbank pseudogene 1185 1413 . + . ID=gene-C9F07_32430;Name=C9F07_32430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32430;pseudo=true PYKI01003221.1 Protein Homology CDS 1185 1413 . + 0 ID=cds-C9F07_32430;Parent=gene-C9F07_32430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012532520.1;locus_tag=C9F07_32430;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003323.1 1 1454 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003323.1 Genbank region 1 1454 . + . ID=PYKI01003323.1:1..1454;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003323.1 Genbank gene 179 718 . + . ID=gene-C9F07_33420;Name=C9F07_33420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33420 PYKI01003323.1 Protein Homology CDS 179 718 . + 0 ID=cds-TGD35936.1;Parent=gene-C9F07_33420;Dbxref=NCBI_GP:TGD35936.1;Name=TGD35936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=C9F07_33420;product=DUF3251 domain-containing protein;protein_id=TGD35936.1;transl_table=11 PYKI01003323.1 Genbank gene 1018 1454 . + . ID=gene-C9F07_33425;Name=C9F07_33425;end_range=1454,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33425;partial=true PYKI01003323.1 Protein Homology CDS 1018 1454 . + 0 ID=cds-TGD35937.1;Parent=gene-C9F07_33425;Dbxref=NCBI_GP:TGD35937.1;Name=TGD35937.1;end_range=1454,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455008.1;locus_tag=C9F07_33425;partial=true;product=nucleoside-specific channel-forming protein Tsx;protein_id=TGD35937.1;transl_table=11 ##sequence-region PYKI01003220.1 1 1452 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003220.1 Genbank region 1 1452 . + . ID=PYKI01003220.1:1..1452;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003220.1 Genbank gene 1 423 . + . ID=gene-C9F07_32410;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=C9F07_32410;partial=true;start_range=.,1 PYKI01003220.1 Protein Homology CDS 1 423 . + 0 ID=cds-TGD36792.1;Parent=gene-C9F07_32410;Dbxref=NCBI_GP:TGD36792.1;Name=TGD36792.1;gbkey=CDS;gene=pepN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=C9F07_32410;partial=true;product=aminopeptidase N;protein_id=TGD36792.1;start_range=.,1;transl_table=11 PYKI01003220.1 Genbank gene 631 1452 . + . ID=gene-C9F07_32415;Name=C9F07_32415;end_range=1452,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32415;partial=true PYKI01003220.1 Protein Homology CDS 631 1452 . + 0 ID=cds-TGD36793.1;Parent=gene-C9F07_32415;Dbxref=NCBI_GP:TGD36793.1;Name=TGD36793.1;end_range=1452,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=C9F07_32415;partial=true;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=TGD36793.1;transl_table=11 ##sequence-region PYKI01001794.1 1 4263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001794.1 Genbank region 1 4263 . + . ID=PYKI01001794.1:1..4263;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001794.1 Genbank gene 1 786 . + . ID=gene-C9F07_17245;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=C9F07_17245;partial=true;start_range=.,1 PYKI01001794.1 Protein Homology CDS 1 786 . + 0 ID=cds-TGD66516.1;Parent=gene-C9F07_17245;Dbxref=NCBI_GP:TGD66516.1;Name=TGD66516.1;Note=formate hydrogenlyase subunit 5%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=C9F07_17245;partial=true;product=hydrogenase 3 large subunit;protein_id=TGD66516.1;start_range=.,1;transl_table=11 PYKI01001794.1 Genbank gene 796 1338 . + . ID=gene-C9F07_17250;Name=C9F07_17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17250 PYKI01001794.1 Protein Homology CDS 796 1338 . + 0 ID=cds-TGD66517.1;Parent=gene-C9F07_17250;Dbxref=NCBI_GP:TGD66517.1;Name=TGD66517.1;Note=electron transfer protein for hydrogenase-3%3B the formate hydrogenlyase complex comprises of a formate dehydrogenase%2C unidentified electron carriers and hydrogenase-3%3B in this non-energy conserving pathway%2C molecular hydrogen and carbodioxide are released from formate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457242.1;locus_tag=C9F07_17250;product=formate hydrogenlyase complex iron-sulfur subunit;protein_id=TGD66517.1;transl_table=11 PYKI01001794.1 Genbank gene 1338 2105 . + . ID=gene-C9F07_17255;Name=C9F07_17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17255 PYKI01001794.1 Protein Homology CDS 1338 2105 . + 0 ID=cds-TGD66518.1;Parent=gene-C9F07_17255;Dbxref=NCBI_GP:TGD66518.1;Name=TGD66518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=C9F07_17255;product=formate hydrogenlyase;protein_id=TGD66518.1;transl_table=11 PYKI01001794.1 Genbank gene 2102 2512 . + . ID=gene-C9F07_17260;Name=C9F07_17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17260 PYKI01001794.1 Protein Homology CDS 2102 2512 . + 0 ID=cds-TGD66519.1;Parent=gene-C9F07_17260;Dbxref=NCBI_GP:TGD66519.1;Name=TGD66519.1;Note=required for the maturation of the formate hydrogenlyase complex;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457240.1;locus_tag=C9F07_17260;product=formate hydrogenlyase maturation protein HycH;protein_id=TGD66519.1;transl_table=11 PYKI01001794.1 Genbank gene 2505 2975 . + . ID=gene-C9F07_17265;Name=C9F07_17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17265 PYKI01001794.1 Protein Homology CDS 2505 2975 . + 0 ID=cds-TGD66520.1;Parent=gene-C9F07_17265;Dbxref=NCBI_GP:TGD66520.1;Name=TGD66520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=C9F07_17265;product=hydrogenase maturation peptidase HycI;protein_id=TGD66520.1;transl_table=11 PYKI01001794.1 Genbank gene 3032 3811 . + . ID=gene-C9F07_17270;Name=C9F07_17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17270 PYKI01001794.1 Protein Homology CDS 3032 3811 . + 0 ID=cds-TGD66521.1;Parent=gene-C9F07_17270;Dbxref=NCBI_GP:TGD66521.1;Name=TGD66521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457238.1;locus_tag=C9F07_17270;product=hypothetical protein;protein_id=TGD66521.1;transl_table=11 PYKI01001794.1 Genbank gene 4012 4263 . + . ID=gene-C9F07_17275;Name=C9F07_17275;end_range=4263,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17275;partial=true PYKI01001794.1 Protein Homology CDS 4012 4263 . + 0 ID=cds-TGD66522.1;Parent=gene-C9F07_17275;Dbxref=NCBI_GP:TGD66522.1;Name=TGD66522.1;Note=involved in electron transport from formate to hydrogen;end_range=4263,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457237.1;locus_tag=C9F07_17275;partial=true;product=formate dehydrogenase;protein_id=TGD66522.1;transl_table=11 ##sequence-region PYKI01001769.1 1 1452 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001769.1 Genbank region 1 1452 . + . ID=PYKI01001769.1:1..1452;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001769.1 Genbank pseudogene 19 267 . - . ID=gene-C9F07_16995;Name=C9F07_16995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16995;pseudo=true PYKI01001769.1 Protein Homology CDS 19 267 . - 0 ID=cds-C9F07_16995;Parent=gene-C9F07_16995;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459657.1;locus_tag=C9F07_16995;product=glutamate/aspartate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 PYKI01001769.1 Genbank gene 604 1452 . - . ID=gene-C9F07_17000;Name=lnt;end_range=1452,.;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=C9F07_17000;partial=true PYKI01001769.1 Protein Homology CDS 604 1452 . - 0 ID=cds-TGD67101.1;Parent=gene-C9F07_17000;Dbxref=NCBI_GP:TGD67101.1;Name=TGD67101.1;end_range=1452,.;gbkey=CDS;gene=lnt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=C9F07_17000;partial=true;product=apolipoprotein N-acyltransferase;protein_id=TGD67101.1;transl_table=11 ##sequence-region PYKI01001491.1 1 1452 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001491.1 Genbank region 1 1452 . + . ID=PYKI01001491.1:1..1452;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001491.1 Genbank pseudogene 1 1452 . + . ID=gene-C9F07_14195;Name=putA;gbkey=Gene;gene=putA;gene_biotype=pseudogene;locus_tag=C9F07_14195;pseudo=true PYKI01001491.1 Protein Homology CDS 1 1452 . + 0 ID=cds-C9F07_14195;Parent=gene-C9F07_14195;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;gene=putA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=C9F07_14195;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA;pseudo=true;transl_table=11 ##sequence-region PYKI01002975.1 1 1451 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002975.1 Genbank region 1 1451 . + . ID=PYKI01002975.1:1..1451;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002975.1 Genbank gene 1 77 . + . ID=gene-C9F07_29825;Name=C9F07_29825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29825;partial=true;start_range=.,1 PYKI01002975.1 Protein Homology CDS 1 77 . + 2 ID=cds-TGD41574.1;Parent=gene-C9F07_29825;Dbxref=NCBI_GP:TGD41574.1;Name=TGD41574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455967.1;locus_tag=C9F07_29825;partial=true;product=stress-induced acidophilic repeat motif-containing protein;protein_id=TGD41574.1;start_range=.,1;transl_table=11 PYKI01002975.1 Genbank gene 197 724 . - . ID=gene-C9F07_29830;Name=C9F07_29830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29830 PYKI01002975.1 Protein Homology CDS 197 724 . - 0 ID=cds-TGD41572.1;Parent=gene-C9F07_29830;Dbxref=NCBI_GP:TGD41572.1;Name=TGD41572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=C9F07_29830;product=competence protein ComA;protein_id=TGD41572.1;transl_table=11 PYKI01002975.1 Genbank gene 1107 1451 . + . ID=gene-C9F07_29835;Name=C9F07_29835;end_range=1451,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29835;partial=true PYKI01002975.1 Protein Homology CDS 1107 1451 . + 0 ID=cds-TGD41573.1;Parent=gene-C9F07_29835;Dbxref=NCBI_GP:TGD41573.1;Name=TGD41573.1;end_range=1451,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=C9F07_29835;partial=true;product=TIGR00156 family protein;protein_id=TGD41573.1;transl_table=11 ##sequence-region PYKI01003537.1 1 1450 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003537.1 Genbank region 1 1450 . + . ID=PYKI01003537.1:1..1450;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003537.1 Genbank gene 1 456 . - . ID=gene-C9F07_35705;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=C9F07_35705;partial=true;start_range=.,1 PYKI01003537.1 Protein Homology CDS 1 456 . - 0 ID=cds-TGD31074.1;Parent=gene-C9F07_35705;Dbxref=NCBI_GP:TGD31074.1;Name=TGD31074.1;Note=regulates genes involved in glucitol utilization;gbkey=CDS;gene=srlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457231.1;locus_tag=C9F07_35705;partial=true;product=transcriptional regulator;protein_id=TGD31074.1;start_range=.,1;transl_table=11 PYKI01003537.1 Genbank gene 654 1013 . - . ID=gene-C9F07_35710;Name=C9F07_35710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35710 PYKI01003537.1 Protein Homology CDS 654 1013 . - 0 ID=cds-TGD31073.1;Parent=gene-C9F07_35710;Dbxref=NCBI_GP:TGD31073.1;Name=TGD31073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457229.1;locus_tag=C9F07_35710;product=transcriptional regulator GutM;protein_id=TGD31073.1;transl_table=11 PYKI01003537.1 Genbank gene 1090 1450 . - . ID=gene-C9F07_35715;Name=C9F07_35715;end_range=1450,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35715;partial=true PYKI01003537.1 Protein Homology CDS 1090 1450 . - 1 ID=cds-TGD31075.1;Parent=gene-C9F07_35715;Dbxref=NCBI_GP:TGD31075.1;Name=TGD31075.1;Note=catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate;end_range=1450,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=C9F07_35715;partial=true;product=sorbitol-6-phosphate 2-dehydrogenase;protein_id=TGD31075.1;transl_table=11 ##sequence-region PYKI01001121.1 1 1450 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001121.1 Genbank region 1 1450 . + . ID=PYKI01001121.1:1..1450;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001121.1 Genbank gene 1 644 . - . ID=gene-C9F07_10445;Name=C9F07_10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10445;partial=true;start_range=.,1 PYKI01001121.1 Protein Homology CDS 1 644 . - 0 ID=cds-TGD94869.1;Parent=gene-C9F07_10445;Dbxref=NCBI_GP:TGD94869.1;Name=TGD94869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457558.1;locus_tag=C9F07_10445;partial=true;product=anion permease;protein_id=TGD94869.1;start_range=.,1;transl_table=11 PYKI01001121.1 Genbank gene 841 1450 . - . ID=gene-C9F07_10450;Name=dkgA;end_range=1450,.;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=C9F07_10450;partial=true PYKI01001121.1 Protein Homology CDS 841 1450 . - 1 ID=cds-TGD94870.1;Parent=gene-C9F07_10450;Dbxref=NCBI_GP:TGD94870.1;Name=TGD94870.1;Note=methylglyoxal reductase/beta-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate;end_range=1450,.;gbkey=CDS;gene=dkgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=C9F07_10450;partial=true;product=2%2C5-didehydrogluconate reductase A;protein_id=TGD94870.1;transl_table=11 ##sequence-region PYKI01003424.1 1 1450 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003424.1 Genbank region 1 1450 . + . ID=PYKI01003424.1:1..1450;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003424.1 Genbank gene 1 821 . + . ID=gene-C9F07_34420;Name=C9F07_34420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34420;partial=true;start_range=.,1 PYKI01003424.1 Protein Homology CDS 1 821 . + 2 ID=cds-TGD33590.1;Parent=gene-C9F07_34420;Dbxref=NCBI_GP:TGD33590.1;Name=TGD33590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=C9F07_34420;partial=true;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=TGD33590.1;start_range=.,1;transl_table=11 PYKI01003424.1 Genbank gene 814 1450 . + . ID=gene-C9F07_34425;Name=C9F07_34425;end_range=1450,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34425;partial=true PYKI01003424.1 Protein Homology CDS 814 1450 . + 0 ID=cds-TGD33591.1;Parent=gene-C9F07_34425;Dbxref=NCBI_GP:TGD33591.1;Name=TGD33591.1;end_range=1450,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=C9F07_34425;partial=true;product=two-component system response regulator NarL;protein_id=TGD33591.1;transl_table=11 ##sequence-region PYKI01001014.1 1 1449 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001014.1 Genbank region 1 1449 . + . ID=PYKI01001014.1:1..1449;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001014.1 Genbank gene 1 529 . + . ID=gene-C9F07_09300;Name=C9F07_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09300;partial=true;start_range=.,1 PYKI01001014.1 Protein Homology CDS 1 529 . + 1 ID=cds-TGD97820.1;Parent=gene-C9F07_09300;Dbxref=NCBI_GP:TGD97820.1;Name=TGD97820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457951.1;locus_tag=C9F07_09300;partial=true;product=cytoplasmic protein;protein_id=TGD97820.1;start_range=.,1;transl_table=11 PYKI01001014.1 Genbank gene 764 1018 . + . ID=gene-C9F07_09305;Name=C9F07_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09305 PYKI01001014.1 Protein Homology CDS 764 1018 . + 0 ID=cds-TGD97821.1;Parent=gene-C9F07_09305;Dbxref=NCBI_GP:TGD97821.1;Name=TGD97821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001753875.1;locus_tag=C9F07_09305;product=hypothetical protein;protein_id=TGD97821.1;transl_table=11 PYKI01001014.1 Genbank gene 1009 1194 . + . ID=gene-C9F07_09310;Name=C9F07_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09310 PYKI01001014.1 Protein Homology CDS 1009 1194 . + 0 ID=cds-TGD97822.1;Parent=gene-C9F07_09310;Dbxref=NCBI_GP:TGD97822.1;Name=TGD97822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000335864.1;locus_tag=C9F07_09310;product=hypothetical protein;protein_id=TGD97822.1;transl_table=11 PYKI01001014.1 Genbank pseudogene 1351 1449 . + . ID=gene-C9F07_09315;Name=C9F07_09315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09315;pseudo=true PYKI01001014.1 Protein Homology CDS 1351 1449 . + 0 ID=cds-C9F07_09315;Parent=gene-C9F07_09315;Note=DNA mismatch endonuclease%3B recognizes and repairs T:G mismatches%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456550.1;locus_tag=C9F07_09315;product=very short patch repair endonuclease;pseudo=true;transl_table=11 ##sequence-region PYKI01001660.1 1 1448 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001660.1 Genbank region 1 1448 . + . ID=PYKI01001660.1:1..1448;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001660.1 Genbank gene 1 156 . + . ID=gene-C9F07_15850;Name=C9F07_15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15850;partial=true;start_range=.,1 PYKI01001660.1 Protein Homology CDS 1 156 . + 0 ID=cds-TGD70172.1;Parent=gene-C9F07_15850;Dbxref=NCBI_GP:TGD70172.1;Name=TGD70172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456851.1;locus_tag=C9F07_15850;partial=true;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=TGD70172.1;start_range=.,1;transl_table=11 PYKI01001660.1 Genbank gene 171 1028 . + . ID=gene-C9F07_15855;Name=C9F07_15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15855 PYKI01001660.1 Protein Homology CDS 171 1028 . + 0 ID=cds-TGD70173.1;Parent=gene-C9F07_15855;Dbxref=NCBI_GP:TGD70173.1;Name=TGD70173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456850.1;locus_tag=C9F07_15855;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=TGD70173.1;transl_table=11 PYKI01001660.1 Genbank gene 1028 1448 . + . ID=gene-C9F07_15860;Name=menC;end_range=1448,.;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=C9F07_15860;partial=true PYKI01001660.1 Protein Homology CDS 1028 1448 . + 0 ID=cds-TGD70174.1;Parent=gene-C9F07_15860;Dbxref=NCBI_GP:TGD70174.1;Name=TGD70174.1;end_range=1448,.;gbkey=CDS;gene=menC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456849.1;locus_tag=C9F07_15860;partial=true;product=o-succinylbenzoate synthase;protein_id=TGD70174.1;transl_table=11 ##sequence-region PYKI01001072.1 1 1447 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001072.1 Genbank region 1 1447 . + . ID=PYKI01001072.1:1..1447;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001072.1 Genbank gene 538 951 . + . ID=gene-C9F07_09950;Name=C9F07_09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09950 PYKI01001072.1 Protein Homology CDS 538 951 . + 0 ID=cds-TGD95915.1;Parent=gene-C9F07_09950;Dbxref=NCBI_GP:TGD95915.1;Name=TGD95915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455749.1;locus_tag=C9F07_09950;product=DNA-binding protein H-NS;protein_id=TGD95915.1;transl_table=11 PYKI01001072.1 Genbank gene 1083 1447 . - . ID=gene-C9F07_09955;Name=C9F07_09955;end_range=1447,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09955;partial=true PYKI01001072.1 Protein Homology CDS 1083 1447 . - 2 ID=cds-TGD95916.1;Parent=gene-C9F07_09955;Dbxref=NCBI_GP:TGD95916.1;Name=TGD95916.1;Note=together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose;end_range=1447,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455748.1;locus_tag=C9F07_09955;partial=true;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=TGD95916.1;transl_table=11 ##sequence-region PYKI01003214.1 1 1447 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003214.1 Genbank region 1 1447 . + . ID=PYKI01003214.1:1..1447;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003214.1 Genbank gene 4 855 . + . ID=gene-C9F07_32350;Name=C9F07_32350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32350 PYKI01003214.1 Protein Homology CDS 4 855 . + 0 ID=cds-TGD36924.1;Parent=gene-C9F07_32350;Dbxref=NCBI_GP:TGD36924.1;Name=TGD36924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457794.1;locus_tag=C9F07_32350;product=phospholipase A;protein_id=TGD36924.1;transl_table=11 PYKI01003214.1 Genbank pseudogene 939 1421 . + . ID=gene-C9F07_32355;Name=C9F07_32355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32355;pseudo=true PYKI01003214.1 Protein Homology CDS 939 1421 . + 0 ID=cds-C9F07_32355;Parent=gene-C9F07_32355;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457793.3;locus_tag=C9F07_32355;product=ATP-dependent DNA helicase RecQ;pseudo=true;transl_table=11 ##sequence-region PYKI01002602.1 1 4253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002602.1 Genbank region 1 4253 . + . ID=PYKI01002602.1:1..4253;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002602.1 Genbank gene 1 929 . - . ID=gene-C9F07_25830;Name=C9F07_25830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25830;partial=true;start_range=.,1 PYKI01002602.1 Protein Homology CDS 1 929 . - 0 ID=cds-TGD49603.1;Parent=gene-C9F07_25830;Dbxref=NCBI_GP:TGD49603.1;Name=TGD49603.1;Note=fermentative%3B catalyzes the formationof pyruvate from lactate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=C9F07_25830;partial=true;product=D-lactate dehydrogenase;protein_id=TGD49603.1;start_range=.,1;transl_table=11 PYKI01002602.1 Genbank pseudogene 1196 3832 . + . ID=gene-C9F07_25835;Name=C9F07_25835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25835;pseudo=true PYKI01002602.1 Protein Homology CDS 1196 3832 . + 0 ID=cds-C9F07_25835;Parent=gene-C9F07_25835;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455858.1;locus_tag=C9F07_25835;product=YdbH family protein;pseudo=true;transl_table=11 PYKI01002602.1 Genbank gene 3832 4023 . + . ID=gene-C9F07_25840;Name=C9F07_25840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25840 PYKI01002602.1 Protein Homology CDS 3832 4023 . + 0 ID=cds-TGD49604.1;Parent=gene-C9F07_25840;Dbxref=NCBI_GP:TGD49604.1;Name=TGD49604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455859.1;locus_tag=C9F07_25840;product=YnbE family lipoprotein;protein_id=TGD49604.1;transl_table=11 PYKI01002602.1 Genbank pseudogene 4031 4253 . + . ID=gene-C9F07_25845;Name=C9F07_25845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25845;pseudo=true PYKI01002602.1 Protein Homology CDS 4031 4253 . + 0 ID=cds-C9F07_25845;Parent=gene-C9F07_25845;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455860.1;locus_tag=C9F07_25845;product=DUF1318 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000703.1 1 1444 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000703.1 Genbank region 1 1444 . + . ID=PYKI01000703.1:1..1444;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000703.1 Genbank gene 1 610 . + . ID=gene-C9F07_06165;Name=C9F07_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06165;partial=true;start_range=.,1 PYKI01000703.1 Protein Homology CDS 1 610 . + 1 ID=cds-TGE11313.1;Parent=gene-C9F07_06165;Dbxref=NCBI_GP:TGE11313.1;Name=TGE11313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=C9F07_06165;partial=true;product=glycerophosphodiester phosphodiesterase;protein_id=TGE11313.1;start_range=.,1;transl_table=11 PYKI01000703.1 Genbank gene 623 1039 . - . ID=gene-C9F07_06170;Name=C9F07_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06170 PYKI01000703.1 Protein Homology CDS 623 1039 . - 0 ID=cds-TGE11314.1;Parent=gene-C9F07_06170;Dbxref=NCBI_GP:TGE11314.1;Name=TGE11314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=C9F07_06170;product=hypothetical protein;protein_id=TGE11314.1;transl_table=11 PYKI01000703.1 Genbank gene 1165 1444 . + . ID=gene-C9F07_06175;Name=ggt;end_range=1444,.;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=C9F07_06175;partial=true PYKI01000703.1 Protein Homology CDS 1165 1444 . + 0 ID=cds-TGE11315.1;Parent=gene-C9F07_06175;Dbxref=NCBI_GP:TGE11315.1;Name=TGE11315.1;Note=periplasmic enzyme%3B post-translationally processed into two subunits which are required for wild-type enzyme activity%3B cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptides;end_range=1444,.;gbkey=CDS;gene=ggt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458368.1;locus_tag=C9F07_06175;partial=true;product=gamma-glutamyltransferase;protein_id=TGE11315.1;transl_table=11 ##sequence-region PYKI01002783.1 1 1444 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002783.1 Genbank region 1 1444 . + . ID=PYKI01002783.1:1..1444;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002783.1 Genbank gene 1 1125 . - . ID=gene-C9F07_27820;Name=C9F07_27820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27820;partial=true;start_range=.,1 PYKI01002783.1 Protein Homology CDS 1 1125 . - 0 ID=cds-TGD46215.1;Parent=gene-C9F07_27820;Dbxref=NCBI_GP:TGD46215.1;Name=TGD46215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=C9F07_27820;partial=true;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=TGD46215.1;start_range=.,1;transl_table=11 PYKI01002783.1 Genbank gene 1115 1444 . - . ID=gene-C9F07_27825;Name=C9F07_27825;end_range=1444,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27825;partial=true PYKI01002783.1 Protein Homology CDS 1115 1444 . - 0 ID=cds-TGD46216.1;Parent=gene-C9F07_27825;Dbxref=NCBI_GP:TGD46216.1;Name=TGD46216.1;end_range=1444,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456997.1;locus_tag=C9F07_27825;partial=true;product=ethanolamine utilization protein EutJ;protein_id=TGD46216.1;transl_table=11 ##sequence-region PYKI01003119.1 1 1443 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003119.1 Genbank region 1 1443 . + . ID=PYKI01003119.1:1..1443;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003119.1 Genbank gene 1 395 . - . ID=gene-C9F07_31200;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=C9F07_31200;partial=true;start_range=.,1 PYKI01003119.1 Protein Homology CDS 1 395 . - 0 ID=cds-TGD39358.1;Parent=gene-C9F07_31200;Dbxref=NCBI_GP:TGD39358.1;Name=TGD39358.1;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454718.1;locus_tag=C9F07_31200;partial=true;product=thiamine ABC transporter ATP-binding protein;protein_id=TGD39358.1;start_range=.,1;transl_table=11 PYKI01003119.1 Genbank gene 379 1443 . - . ID=gene-C9F07_31205;Name=thiP;end_range=1443,.;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=C9F07_31205;partial=true PYKI01003119.1 Protein Homology CDS 379 1443 . - 0 ID=cds-TGD39359.1;Parent=gene-C9F07_31205;Dbxref=NCBI_GP:TGD39359.1;Name=TGD39359.1;end_range=1443,.;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454719.1;locus_tag=C9F07_31205;partial=true;product=thiamine/thiamine pyrophosphate ABC transporter%2C permease protein;protein_id=TGD39359.1;transl_table=11 ##sequence-region PYKI01003490.1 1 1441 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003490.1 Genbank region 1 1441 . + . ID=PYKI01003490.1:1..1441;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003490.1 Genbank gene 61 732 . + . ID=gene-C9F07_35110;Name=C9F07_35110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35110 PYKI01003490.1 Protein Homology CDS 61 732 . + 0 ID=cds-TGD32198.1;Parent=gene-C9F07_35110;Dbxref=NCBI_GP:TGD32198.1;Name=TGD32198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=C9F07_35110;product=hypothetical protein;protein_id=TGD32198.1;transl_table=11 PYKI01003490.1 Genbank pseudogene 1071 1385 . + . ID=gene-C9F07_35115;Name=C9F07_35115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35115;pseudo=true PYKI01003490.1 Protein Homology CDS 1071 1385 . + 0 ID=cds-C9F07_35115;Parent=gene-C9F07_35115;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=C9F07_35115;product=fimbrial protein SthA;pseudo=true;transl_table=11 ##sequence-region PYKI01000859.1 1 1441 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000859.1 Genbank region 1 1441 . + . ID=PYKI01000859.1:1..1441;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000859.1 Genbank gene 1 575 . + . ID=gene-C9F07_07855;Name=C9F07_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07855;partial=true;start_range=.,1 PYKI01000859.1 Protein Homology CDS 1 575 . + 2 ID=cds-TGE05867.1;Parent=gene-C9F07_07855;Dbxref=NCBI_GP:TGE05867.1;Name=TGE05867.1;Note=P-type%3B involved in magnesium transport into the cytoplasm;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458171.1;locus_tag=C9F07_07855;partial=true;product=magnesium-translocating P-type ATPase;protein_id=TGE05867.1;start_range=.,1;transl_table=11 PYKI01000859.1 Genbank gene 597 689 . + . ID=gene-C9F07_07860;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=C9F07_07860 PYKI01000859.1 Protein Homology CDS 597 689 . + 0 ID=cds-TGE05868.1;Parent=gene-C9F07_07860;Dbxref=NCBI_GP:TGE05868.1;Name=TGE05868.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082119.1;locus_tag=C9F07_07860;product=protein MgtR;protein_id=TGE05868.1;transl_table=11 PYKI01000859.1 Genbank gene 890 1369 . + . ID=gene-C9F07_07865;Name=C9F07_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07865 PYKI01000859.1 Protein Homology CDS 890 1369 . + 0 ID=cds-TGE05869.1;Parent=gene-C9F07_07865;Dbxref=NCBI_GP:TGE05869.1;Name=TGE05869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=C9F07_07865;product=hypothetical protein;protein_id=TGE05869.1;transl_table=11 ##sequence-region PYKI01001713.1 1 1441 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001713.1 Genbank region 1 1441 . + . ID=PYKI01001713.1:1..1441;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001713.1 Genbank gene 1 1017 . + . ID=gene-C9F07_16355;Name=C9F07_16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16355;partial=true;start_range=.,1 PYKI01001713.1 Protein Homology CDS 1 1017 . + 0 ID=cds-TGD69106.1;Parent=gene-C9F07_16355;Dbxref=NCBI_GP:TGD69106.1;Name=TGD69106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458523.1;locus_tag=C9F07_16355;partial=true;product=YjbH domain-containing protein;protein_id=TGD69106.1;start_range=.,1;transl_table=11 PYKI01001713.1 Genbank gene 1160 1441 . + . ID=gene-C9F07_16360;Name=C9F07_16360;end_range=1441,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16360;partial=true PYKI01001713.1 Protein Homology CDS 1160 1441 . + 0 ID=cds-TGD69107.1;Parent=gene-C9F07_16360;Dbxref=NCBI_GP:TGD69107.1;Name=TGD69107.1;end_range=1441,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458524.1;locus_tag=C9F07_16360;partial=true;product=phosphate-starvation-inducible protein PsiE;protein_id=TGD69107.1;transl_table=11 ##sequence-region PYKI01003584.1 1 1440 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003584.1 Genbank region 1 1440 . + . ID=PYKI01003584.1:1..1440;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003584.1 Genbank gene 159 1142 . + . ID=gene-C9F07_36165;Name=C9F07_36165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36165 PYKI01003584.1 Protein Homology CDS 159 1142 . + 0 ID=cds-TGD29996.1;Parent=gene-C9F07_36165;Dbxref=NCBI_GP:TGD29996.1;Name=TGD29996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=C9F07_36165;product=D-threonate 4-phosphate dehydrogenase;protein_id=TGD29996.1;transl_table=11 PYKI01003584.1 Genbank gene 1152 1440 . + . ID=gene-C9F07_36170;Name=C9F07_36170;end_range=1440,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36170;partial=true PYKI01003584.1 Protein Homology CDS 1152 1440 . + 0 ID=cds-TGD29997.1;Parent=gene-C9F07_36170;Dbxref=NCBI_GP:TGD29997.1;Name=TGD29997.1;end_range=1440,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454777.1;locus_tag=C9F07_36170;partial=true;product=DeoR family transcriptional regulator;protein_id=TGD29997.1;transl_table=11 ##sequence-region PYKI01001636.1 1 1440 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001636.1 Genbank region 1 1440 . + . ID=PYKI01001636.1:1..1440;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001636.1 Genbank pseudogene 63 224 . - . ID=gene-C9F07_15630;Name=C9F07_15630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15630;pseudo=true PYKI01001636.1 Protein Homology CDS 63 224 . - 0 ID=cds-C9F07_15630;Parent=gene-C9F07_15630;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=C9F07_15630;product=Nif3-like dinuclear metal center protein;pseudo=true;transl_table=11 PYKI01001636.1 Genbank gene 396 509 . + . ID=gene-C9F07_15635;Name=C9F07_15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15635 PYKI01001636.1 Protein Homology CDS 396 509 . + 0 ID=cds-TGD70425.1;Parent=gene-C9F07_15635;Dbxref=NCBI_GP:TGD70425.1;Name=TGD70425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531359.1;locus_tag=C9F07_15635;product=transporter;protein_id=TGD70425.1;transl_table=11 PYKI01001636.1 Genbank gene 553 1440 . + . ID=gene-C9F07_15640;Name=C9F07_15640;end_range=1440,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15640;partial=true PYKI01001636.1 Protein Homology CDS 553 1440 . + 0 ID=cds-TGD70426.1;Parent=gene-C9F07_15640;Dbxref=NCBI_GP:TGD70426.1;Name=TGD70426.1;end_range=1440,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455269.1;locus_tag=C9F07_15640;partial=true;product=MFS transporter;protein_id=TGD70426.1;transl_table=11 ##sequence-region PYKI01002873.1 1 1439 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002873.1 Genbank region 1 1439 . + . ID=PYKI01002873.1:1..1439;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002873.1 Genbank gene 1 1439 . + . ID=gene-C9F07_28785;Name=C9F07_28785;end_range=1439,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28785;partial=true;start_range=.,1 PYKI01002873.1 Protein Homology CDS 1 1439 . + 0 ID=cds-TGD44496.1;Parent=gene-C9F07_28785;Dbxref=NCBI_GP:TGD44496.1;Name=TGD44496.1;end_range=1439,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457063.1;locus_tag=C9F07_28785;partial=true;product=hypothetical protein;protein_id=TGD44496.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000298.1 1 4252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000298.1 Genbank region 1 4252 . + . ID=PYKI01000298.1:1..4252;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000298.1 Genbank gene 1 2864 . + . ID=gene-C9F07_01965;Name=C9F07_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01965;partial=true;start_range=.,1 PYKI01000298.1 Protein Homology CDS 1 2864 . + 2 ID=cds-TGE27803.1;Parent=gene-C9F07_01965;Dbxref=NCBI_GP:TGE27803.1;Name=TGE27803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457158.1;locus_tag=C9F07_01965;partial=true;product=Ig-like domain repeat protein;protein_id=TGE27803.1;start_range=.,1;transl_table=11 PYKI01000298.1 Genbank gene 2929 4252 . + . ID=gene-C9F07_01970;Name=C9F07_01970;end_range=4252,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01970;partial=true PYKI01000298.1 Protein Homology CDS 2929 4252 . + 0 ID=cds-TGE27804.1;Parent=gene-C9F07_01970;Dbxref=NCBI_GP:TGE27804.1;Name=TGE27804.1;end_range=4252,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=C9F07_01970;partial=true;product=type I secretion protein TolC;protein_id=TGE27804.1;transl_table=11 ##sequence-region PYKI01000947.1 1 8506 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000947.1 Genbank region 1 8506 . + . ID=PYKI01000947.1:1..8506;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000947.1 Genbank gene 1 586 . + . ID=gene-C9F07_08620;Name=C9F07_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08620;partial=true;start_range=.,1 PYKI01000947.1 Protein Homology CDS 1 586 . + 1 ID=cds-TGE01611.1;Parent=gene-C9F07_08620;Dbxref=NCBI_GP:TGE01611.1;Name=TGE01611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458010.1;locus_tag=C9F07_08620;partial=true;product=hypothetical protein;protein_id=TGE01611.1;start_range=.,1;transl_table=11 PYKI01000947.1 Genbank gene 941 1264 . - . ID=gene-C9F07_08625;Name=C9F07_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08625 PYKI01000947.1 Protein Homology CDS 941 1264 . - 0 ID=cds-TGE01612.1;Parent=gene-C9F07_08625;Dbxref=NCBI_GP:TGE01612.1;Name=TGE01612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=C9F07_08625;product=AzlD domain-containing protein;protein_id=TGE01612.1;transl_table=11 PYKI01000947.1 Genbank gene 1264 1923 . - . ID=gene-C9F07_08630;Name=C9F07_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08630 PYKI01000947.1 Protein Homology CDS 1264 1923 . - 0 ID=cds-TGE01613.1;Parent=gene-C9F07_08630;Dbxref=NCBI_GP:TGE01613.1;Name=TGE01613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458008.1;locus_tag=C9F07_08630;product=branched-chain amino acid ABC transporter permease;protein_id=TGE01613.1;transl_table=11 PYKI01000947.1 Genbank gene 2006 2572 . + . ID=gene-C9F07_08635;Name=C9F07_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08635 PYKI01000947.1 Protein Homology CDS 2006 2572 . + 0 ID=cds-TGE01620.1;Parent=gene-C9F07_08635;Dbxref=NCBI_GP:TGE01620.1;Name=TGE01620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462923.1;locus_tag=C9F07_08635;product=XRE family transcriptional regulator;protein_id=TGE01620.1;transl_table=11 PYKI01000947.1 Genbank gene 2661 2975 . - . ID=gene-C9F07_08640;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=C9F07_08640 PYKI01000947.1 Protein Homology CDS 2661 2975 . - 0 ID=cds-TGE01614.1;Parent=gene-C9F07_08640;Dbxref=NCBI_GP:TGE01614.1;Name=TGE01614.1;gbkey=CDS;gene=rhaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458006.1;locus_tag=C9F07_08640;product=L-rhamnose mutarotase;protein_id=TGE01614.1;transl_table=11 PYKI01000947.1 Genbank gene 2972 4120 . - . ID=gene-C9F07_08645;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=C9F07_08645 PYKI01000947.1 Protein Homology CDS 2972 4120 . - 0 ID=cds-TGE01615.1;Parent=gene-C9F07_08645;Dbxref=NCBI_GP:TGE01615.1;Name=TGE01615.1;gbkey=CDS;gene=fucO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458005.1;locus_tag=C9F07_08645;product=lactaldehyde reductase;protein_id=TGE01615.1;transl_table=11 PYKI01000947.1 Genbank gene 4246 5073 . - . ID=gene-C9F07_08650;Name=C9F07_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08650 PYKI01000947.1 Protein Homology CDS 4246 5073 . - 0 ID=cds-TGE01616.1;Parent=gene-C9F07_08650;Dbxref=NCBI_GP:TGE01616.1;Name=TGE01616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=C9F07_08650;product=rhamnulose-1-phosphate aldolase;protein_id=TGE01616.1;transl_table=11 PYKI01000947.1 Genbank gene 5216 6475 . - . ID=gene-C9F07_08655;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=C9F07_08655 PYKI01000947.1 Protein Homology CDS 5216 6475 . - 0 ID=cds-TGE01617.1;Parent=gene-C9F07_08655;Dbxref=NCBI_GP:TGE01617.1;Name=TGE01617.1;gbkey=CDS;gene=rhaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=C9F07_08655;product=L-rhamnose isomerase;protein_id=TGE01617.1;transl_table=11 PYKI01000947.1 Genbank gene 6472 7941 . - . ID=gene-C9F07_08660;Name=C9F07_08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08660 PYKI01000947.1 Protein Homology CDS 6472 7941 . - 0 ID=cds-TGE01618.1;Parent=gene-C9F07_08660;Dbxref=NCBI_GP:TGE01618.1;Name=TGE01618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=C9F07_08660;product=rhamnulokinase;protein_id=TGE01618.1;transl_table=11 PYKI01000947.1 Genbank gene 8229 8506 . + . ID=gene-C9F07_08665;Name=C9F07_08665;end_range=8506,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08665;partial=true PYKI01000947.1 Protein Homology CDS 8229 8506 . + 0 ID=cds-TGE01619.1;Parent=gene-C9F07_08665;Dbxref=NCBI_GP:TGE01619.1;Name=TGE01619.1;end_range=8506,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458002.1;locus_tag=C9F07_08665;partial=true;product=AraC family transcriptional regulator;protein_id=TGE01619.1;transl_table=11 ##sequence-region PYKI01000873.1 1 1438 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000873.1 Genbank region 1 1438 . + . ID=PYKI01000873.1:1..1438;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000873.1 Genbank gene 1 370 . - . ID=gene-C9F07_08015;Name=C9F07_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08015;partial=true;start_range=.,1 PYKI01000873.1 Protein Homology CDS 1 370 . - 0 ID=cds-TGE05065.1;Parent=gene-C9F07_08015;Dbxref=NCBI_GP:TGE05065.1;Name=TGE05065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456299.1;locus_tag=C9F07_08015;partial=true;product=hydrogenase-1 operon protein HyaE;protein_id=TGE05065.1;start_range=.,1;transl_table=11 PYKI01000873.1 Genbank gene 360 956 . - . ID=gene-C9F07_08020;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=C9F07_08020 PYKI01000873.1 Protein Homology CDS 360 956 . - 0 ID=cds-TGE05066.1;Parent=gene-C9F07_08020;Dbxref=NCBI_GP:TGE05066.1;Name=TGE05066.1;gbkey=CDS;gene=hybD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456298.1;locus_tag=C9F07_08020;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=TGE05066.1;transl_table=11 PYKI01000873.1 Genbank gene 953 1438 . - . ID=gene-C9F07_08025;Name=cybH;end_range=1438,.;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=C9F07_08025;partial=true PYKI01000873.1 Protein Homology CDS 953 1438 . - 0 ID=cds-TGE05067.1;Parent=gene-C9F07_08025;Dbxref=NCBI_GP:TGE05067.1;Name=TGE05067.1;end_range=1438,.;gbkey=CDS;gene=cybH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456297.1;locus_tag=C9F07_08025;partial=true;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=TGE05067.1;transl_table=11 ##sequence-region PYKI01003469.1 1 1436 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003469.1 Genbank region 1 1436 . + . ID=PYKI01003469.1:1..1436;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003469.1 Genbank gene 1 320 . - . ID=gene-C9F07_34875;Name=C9F07_34875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34875;partial=true;start_range=.,1 PYKI01003469.1 Protein Homology CDS 1 320 . - 0 ID=cds-TGD32898.1;Parent=gene-C9F07_34875;Dbxref=NCBI_GP:TGD32898.1;Name=TGD32898.1;Note=cell invasion protein A%3B actin-binding%3B required for entry of the Salmonella into the host cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=C9F07_34875;partial=true;product=pathogenicity island 1 effector protein SipA;protein_id=TGD32898.1;start_range=.,1;transl_table=11 PYKI01003469.1 Genbank gene 339 1361 . - . ID=gene-C9F07_34880;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=C9F07_34880 PYKI01003469.1 Protein Homology CDS 339 1361 . - 0 ID=cds-TGD32897.1;Parent=gene-C9F07_34880;Dbxref=NCBI_GP:TGD32897.1;Name=TGD32897.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457277.1;locus_tag=C9F07_34880;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=TGD32897.1;transl_table=11 ##sequence-region PYKI01003231.1 1 1435 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003231.1 Genbank region 1 1435 . + . ID=PYKI01003231.1:1..1435;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003231.1 Genbank gene 1 98 . + . ID=gene-C9F07_32540;Name=C9F07_32540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32540;partial=true;start_range=.,1 PYKI01003231.1 Protein Homology CDS 1 98 . + 2 ID=cds-TGD36543.1;Parent=gene-C9F07_32540;Dbxref=NCBI_GP:TGD36543.1;Name=TGD36543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456982.1;locus_tag=C9F07_32540;partial=true;product=DUF1131 domain-containing protein;protein_id=TGD36543.1;start_range=.,1;transl_table=11 PYKI01003231.1 Genbank gene 193 1092 . + . ID=gene-C9F07_32545;Name=C9F07_32545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32545 PYKI01003231.1 Protein Homology CDS 193 1092 . + 0 ID=cds-TGD36544.1;Parent=gene-C9F07_32545;Dbxref=NCBI_GP:TGD36544.1;Name=TGD36544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456981.1;locus_tag=C9F07_32545;product=iron-dependent peroxidase;protein_id=TGD36544.1;transl_table=11 PYKI01003231.1 Genbank gene 1329 1435 . + . ID=gene-C9F07_32550;Name=C9F07_32550;end_range=1435,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32550;partial=true PYKI01003231.1 Protein Homology CDS 1329 1435 . + 0 ID=cds-TGD36545.1;Parent=gene-C9F07_32550;Dbxref=NCBI_GP:TGD36545.1;Name=TGD36545.1;end_range=1435,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456980.1;locus_tag=C9F07_32550;partial=true;product=NAD(P)-dependent oxidoreductase;protein_id=TGD36545.1;transl_table=11 ##sequence-region PYKI01003235.1 1 1434 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003235.1 Genbank region 1 1434 . + . ID=PYKI01003235.1:1..1434;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003235.1 Genbank gene 1 540 . + . ID=gene-C9F07_32580;Name=C9F07_32580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32580;partial=true;start_range=.,1 PYKI01003235.1 Protein Homology CDS 1 540 . + 0 ID=cds-TGD36502.1;Parent=gene-C9F07_32580;Dbxref=NCBI_GP:TGD36502.1;Name=TGD36502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395336.1;locus_tag=C9F07_32580;partial=true;product=type III restriction endonuclease;protein_id=TGD36502.1;start_range=.,1;transl_table=11 PYKI01003235.1 Genbank gene 588 890 . - . ID=gene-C9F07_32585;Name=C9F07_32585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32585 PYKI01003235.1 Protein Homology CDS 588 890 . - 0 ID=cds-TGD36503.1;Parent=gene-C9F07_32585;Dbxref=NCBI_GP:TGD36503.1;Name=TGD36503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003246717.1;locus_tag=C9F07_32585;product=hypothetical protein;protein_id=TGD36503.1;transl_table=11 PYKI01003235.1 Genbank gene 1031 1434 . - . ID=gene-C9F07_32590;Name=C9F07_32590;end_range=1434,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32590;partial=true PYKI01003235.1 Protein Homology CDS 1031 1434 . - 2 ID=cds-TGD36504.1;Parent=gene-C9F07_32590;Dbxref=NCBI_GP:TGD36504.1;Name=TGD36504.1;end_range=1434,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463348.1;locus_tag=C9F07_32590;partial=true;product=DNA helicase;protein_id=TGD36504.1;transl_table=11 ##sequence-region PYKI01002628.1 1 1434 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002628.1 Genbank region 1 1434 . + . ID=PYKI01002628.1:1..1434;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002628.1 Genbank gene 1 370 . - . ID=gene-C9F07_26155;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=C9F07_26155;partial=true;start_range=.,1 PYKI01002628.1 Protein Homology CDS 1 370 . - 0 ID=cds-TGD49469.1;Parent=gene-C9F07_26155;Dbxref=NCBI_GP:TGD49469.1;Name=TGD49469.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458800.1;locus_tag=C9F07_26155;partial=true;product=protease modulator HflC;protein_id=TGD49469.1;start_range=.,1;transl_table=11 PYKI01002628.1 Genbank gene 373 1434 . - . ID=gene-C9F07_26160;Name=C9F07_26160;end_range=1434,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26160;partial=true PYKI01002628.1 Protein Homology CDS 373 1434 . - 0 ID=cds-TGD49470.1;Parent=gene-C9F07_26160;Dbxref=NCBI_GP:TGD49470.1;Name=TGD49470.1;end_range=1434,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=C9F07_26160;partial=true;product=FtsH protease activity modulator HflK;protein_id=TGD49470.1;transl_table=11 ##sequence-region PYKI01001488.1 1 1432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001488.1 Genbank region 1 1432 . + . ID=PYKI01001488.1:1..1432;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001488.1 Genbank pseudogene 5 214 . - . ID=gene-C9F07_14165;Name=C9F07_14165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14165;pseudo=true PYKI01001488.1 Protein Homology CDS 5 214 . - 0 ID=cds-C9F07_14165;Parent=gene-C9F07_14165;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020231183.1;locus_tag=C9F07_14165;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001488.1 Genbank gene 286 981 . - . ID=gene-C9F07_14170;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=C9F07_14170 PYKI01001488.1 Protein Homology CDS 286 981 . - 0 ID=cds-TGD79209.1;Parent=gene-C9F07_14170;Dbxref=NCBI_GP:TGD79209.1;Name=TGD79209.1;gbkey=CDS;gene=tsaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456327.1;locus_tag=C9F07_14170;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=TGD79209.1;transl_table=11 PYKI01001488.1 Genbank pseudogene 1039 1401 . - . ID=gene-C9F07_14175;Name=C9F07_14175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14175;pseudo=true PYKI01001488.1 Protein Homology CDS 1039 1401 . - 0 ID=cds-C9F07_14175;Parent=gene-C9F07_14175;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456328.1;locus_tag=C9F07_14175;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003066.1 1 1432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003066.1 Genbank region 1 1432 . + . ID=PYKI01003066.1:1..1432;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003066.1 Genbank pseudogene 292 1359 . + . ID=gene-C9F07_30740;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=pseudogene;locus_tag=C9F07_30740;pseudo=true PYKI01003066.1 Protein Homology CDS 292 1359 . + 0 ID=cds-C9F07_30740;Parent=gene-C9F07_30740;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=glmU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458081.1;locus_tag=C9F07_30740;product=UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01001907.1 1 1432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001907.1 Genbank region 1 1432 . + . ID=PYKI01001907.1:1..1432;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001907.1 Genbank gene 65 244 . - . ID=gene-C9F07_18370;Name=C9F07_18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18370 PYKI01001907.1 Protein Homology CDS 65 244 . - 0 ID=cds-TGD61349.1;Parent=gene-C9F07_18370;Dbxref=NCBI_GP:TGD61349.1;Name=TGD61349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000287299.1;locus_tag=C9F07_18370;product=hypothetical protein;protein_id=TGD61349.1;transl_table=11 PYKI01001907.1 Genbank gene 250 1035 . + . ID=gene-C9F07_18375;Name=C9F07_18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18375 PYKI01001907.1 Protein Homology CDS 250 1035 . + 0 ID=cds-TGD61350.1;Parent=gene-C9F07_18375;Dbxref=NCBI_GP:TGD61350.1;Name=TGD61350.1;Note=enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461470.3;locus_tag=C9F07_18375;product=enhanced serine sensitivity protein SseB;protein_id=TGD61350.1;transl_table=11 ##sequence-region PYKI01002517.1 1 1431 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002517.1 Genbank region 1 1431 . + . ID=PYKI01002517.1:1..1431;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002517.1 Genbank gene 1 491 . - . ID=gene-C9F07_24940;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;gene_synonym=yahU;locus_tag=C9F07_24940;partial=true;start_range=.,1 PYKI01002517.1 Protein Homology CDS 1 491 . - 0 ID=cds-TGD50147.1;Parent=gene-C9F07_24940;Dbxref=NCBI_GP:TGD50147.1;Name=TGD50147.1;Note=catalyzes the formation of propionyl-CoA using propionate as a substrate%3B PrpE from Ralstonia solanacearum can produce acetyl-%2C propionyl-%2C butyryl- and acrylyl-coenzyme A%2C and Salmonella enterica produces propionyl- and butyryl-coenzyme A%3B not expressed in Escherichia coli when grown on propionate/minimal media%3B ATP-dependent;gbkey=CDS;gene=prpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454966.1;locus_tag=C9F07_24940;partial=true;product=propionyl-CoA synthetase;protein_id=TGD50147.1;start_range=.,1;transl_table=11 PYKI01002517.1 Genbank pseudogene 532 1347 . - . ID=gene-C9F07_24945;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=pseudogene;locus_tag=C9F07_24945;pseudo=true PYKI01002517.1 Protein Homology CDS 532 1347 . - 0 ID=cds-C9F07_24945;Parent=gene-C9F07_24945;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=prpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=C9F07_24945;product=2-methylcitrate dehydratase;pseudo=true;transl_table=11 ##sequence-region PYKI01002859.1 1 1431 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002859.1 Genbank region 1 1431 . + . ID=PYKI01002859.1:1..1431;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002859.1 Genbank gene 1 374 . - . ID=gene-C9F07_28640;Name=C9F07_28640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28640;partial=true;start_range=.,1 PYKI01002859.1 Protein Homology CDS 1 374 . - 0 ID=cds-TGD44976.1;Parent=gene-C9F07_28640;Dbxref=NCBI_GP:TGD44976.1;Name=TGD44976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455176.1;locus_tag=C9F07_28640;partial=true;product=carbon starvation protein A;protein_id=TGD44976.1;start_range=.,1;transl_table=11 PYKI01002859.1 Genbank gene 556 969 . - . ID=gene-C9F07_28645;Name=C9F07_28645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28645 PYKI01002859.1 Protein Homology CDS 556 969 . - 0 ID=cds-TGD44977.1;Parent=gene-C9F07_28645;Dbxref=NCBI_GP:TGD44977.1;Name=TGD44977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455175.1;locus_tag=C9F07_28645;product=proofreading thioesterase EntH;protein_id=TGD44977.1;transl_table=11 PYKI01002859.1 Genbank pseudogene 972 1397 . - . ID=gene-C9F07_28650;Name=C9F07_28650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28650;pseudo=true PYKI01002859.1 Protein Homology CDS 972 1397 . - 0 ID=cds-C9F07_28650;Parent=gene-C9F07_28650;Note=catalyzes the formation of 2%2C3-dihydroxybenzoate from 2%2C3-dihydro-2%2C3-dihydroxybenzoate%3B involved in the biosynthesis of siderophores%2C enterobactin%2C bacillibactin or vibriobactin%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=C9F07_28650;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01003330.1 1 4248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003330.1 Genbank region 1 4248 . + . ID=PYKI01003330.1:1..4248;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003330.1 Genbank gene 310 1407 . + . ID=gene-C9F07_33490;Name=C9F07_33490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33490 PYKI01003330.1 Protein Homology CDS 310 1407 . + 0 ID=cds-TGD35112.1;Parent=gene-C9F07_33490;Dbxref=NCBI_GP:TGD35112.1;Name=TGD35112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457383.1;locus_tag=C9F07_33490;product=murein transglycosylase A;protein_id=TGD35112.1;transl_table=11 PYKI01003330.1 Genbank gene 1517 2323 . + . ID=gene-C9F07_33495;Name=C9F07_33495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33495 PYKI01003330.1 Protein Homology CDS 1517 2323 . + 0 ID=cds-TGD35113.1;Parent=gene-C9F07_33495;Dbxref=NCBI_GP:TGD35113.1;Name=TGD35113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457382.1;locus_tag=C9F07_33495;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=TGD35113.1;transl_table=11 PYKI01003330.1 Genbank gene 2375 3262 . - . ID=gene-C9F07_33500;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=C9F07_33500 PYKI01003330.1 Protein Homology CDS 2375 3262 . - 0 ID=cds-TGD35116.1;Parent=gene-C9F07_33500;Dbxref=NCBI_GP:TGD35116.1;Name=TGD35116.1;gbkey=CDS;gene=rarD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=C9F07_33500;product=EamA family transporter RarD;protein_id=TGD35116.1;transl_table=11 PYKI01003330.1 Genbank gene 3562 4005 . - . ID=gene-C9F07_33505;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=C9F07_33505 PYKI01003330.1 Protein Homology CDS 3562 4005 . - 0 ID=cds-TGD35114.1;Parent=gene-C9F07_33505;Dbxref=NCBI_GP:TGD35114.1;Name=TGD35114.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457380.1;locus_tag=C9F07_33505;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=TGD35114.1;transl_table=11 PYKI01003330.1 Genbank gene 4005 4248 . - . ID=gene-C9F07_33510;Name=C9F07_33510;end_range=4248,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33510;partial=true PYKI01003330.1 Protein Homology CDS 4005 4248 . - 1 ID=cds-TGD35115.1;Parent=gene-C9F07_33510;Dbxref=NCBI_GP:TGD35115.1;Name=TGD35115.1;end_range=4248,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457379.1;locus_tag=C9F07_33510;partial=true;product=cysteine desulfurase CsdA;protein_id=TGD35115.1;transl_table=11 ##sequence-region PYKI01001747.1 1 1429 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001747.1 Genbank region 1 1429 . + . ID=PYKI01001747.1:1..1429;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001747.1 Genbank gene 1 355 . + . ID=gene-C9F07_16775;Name=C9F07_16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16775;partial=true;start_range=.,1 PYKI01001747.1 Protein Homology CDS 1 355 . + 1 ID=cds-TGD68311.1;Parent=gene-C9F07_16775;Dbxref=NCBI_GP:TGD68311.1;Name=TGD68311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457257.1;locus_tag=C9F07_16775;partial=true;product=hypothetical protein;protein_id=TGD68311.1;start_range=.,1;transl_table=11 PYKI01001747.1 Genbank gene 346 1194 . + . ID=gene-C9F07_16780;Name=C9F07_16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16780 PYKI01001747.1 Protein Homology CDS 346 1194 . + 0 ID=cds-TGD68312.1;Parent=gene-C9F07_16780;Dbxref=NCBI_GP:TGD68312.1;Name=TGD68312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457258.1;locus_tag=C9F07_16780;product=metal ABC transporter permease;protein_id=TGD68312.1;transl_table=11 PYKI01001747.1 Genbank gene 1293 1429 . - . ID=gene-C9F07_16785;Name=yopJ;end_range=1429,.;gbkey=Gene;gene=yopJ;gene_biotype=protein_coding;gene_synonym=avrA;locus_tag=C9F07_16785;partial=true PYKI01001747.1 Protein Homology CDS 1293 1429 . - 2 ID=cds-TGD68313.1;Parent=gene-C9F07_16785;Dbxref=NCBI_GP:TGD68313.1;Name=TGD68313.1;Note=involved in the survival of the bacteria in host cells%3B blocks cytokine production and induces apoptosis;end_range=1429,.;gbkey=CDS;gene=yopJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461786.1;locus_tag=C9F07_16785;partial=true;product=effector protein YopJ;protein_id=TGD68313.1;transl_table=11 ##sequence-region PYKI01001134.1 1 1429 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001134.1 Genbank region 1 1429 . + . ID=PYKI01001134.1:1..1429;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001134.1 Genbank gene 1 1267 . - . ID=gene-C9F07_10570;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=C9F07_10570;partial=true;start_range=.,1 PYKI01001134.1 Protein Homology CDS 1 1267 . - 0 ID=cds-TGD94641.1;Parent=gene-C9F07_10570;Dbxref=NCBI_GP:TGD94641.1;Name=TGD94641.1;gbkey=CDS;gene=selB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=C9F07_10570;partial=true;product=selenocysteine-specific translation elongation factor;protein_id=TGD94641.1;start_range=.,1;transl_table=11 PYKI01001134.1 Genbank gene 1264 1429 . - . ID=gene-C9F07_10575;Name=C9F07_10575;end_range=1429,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10575;partial=true PYKI01001134.1 Protein Homology CDS 1264 1429 . - 1 ID=cds-TGD94642.1;Parent=gene-C9F07_10575;Dbxref=NCBI_GP:TGD94642.1;Name=TGD94642.1;Note=catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis;end_range=1429,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458243.1;locus_tag=C9F07_10575;partial=true;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=TGD94642.1;transl_table=11 ##sequence-region PYKI01002694.1 1 1428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002694.1 Genbank region 1 1428 . + . ID=PYKI01002694.1:1..1428;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002694.1 Genbank gene 1 1019 . + . ID=gene-C9F07_26865;Name=C9F07_26865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26865;partial=true;start_range=.,1 PYKI01002694.1 Protein Homology CDS 1 1019 . + 2 ID=cds-TGD48282.1;Parent=gene-C9F07_26865;Dbxref=NCBI_GP:TGD48282.1;Name=TGD48282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459835.1;locus_tag=C9F07_26865;partial=true;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=TGD48282.1;start_range=.,1;transl_table=11 PYKI01002694.1 Genbank gene 1025 1428 . - . ID=gene-C9F07_26870;Name=C9F07_26870;end_range=1428,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26870;partial=true PYKI01002694.1 Protein Homology CDS 1025 1428 . - 2 ID=cds-TGD48283.1;Parent=gene-C9F07_26870;Dbxref=NCBI_GP:TGD48283.1;Name=TGD48283.1;end_range=1428,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459836.1;locus_tag=C9F07_26870;partial=true;product=LysR family transcriptional regulator;protein_id=TGD48283.1;transl_table=11 ##sequence-region PYKI01002377.1 1 1428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002377.1 Genbank region 1 1428 . + . ID=PYKI01002377.1:1..1428;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002377.1 Genbank gene 95 1285 . - . ID=gene-C9F07_23370;Name=C9F07_23370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23370 PYKI01002377.1 Protein Homology CDS 95 1285 . - 0 ID=cds-TGD52570.1;Parent=gene-C9F07_23370;Dbxref=NCBI_GP:TGD52570.1;Name=TGD52570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455958.1;locus_tag=C9F07_23370;product=sugar transporter;protein_id=TGD52570.1;transl_table=11 PYKI01002377.1 Genbank pseudogene 1230 1358 . - . ID=gene-C9F07_23375;Name=C9F07_23375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23375;pseudo=true PYKI01002377.1 Protein Homology CDS 1230 1358 . - 0 ID=cds-C9F07_23375;Parent=gene-C9F07_23375;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007671327.1;locus_tag=C9F07_23375;product=sugar transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01000878.1 1 1426 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000878.1 Genbank region 1 1426 . + . ID=PYKI01000878.1:1..1426;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000878.1 Genbank gene 1 419 . + . ID=gene-C9F07_08060;Name=C9F07_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08060;partial=true;start_range=.,1 PYKI01000878.1 Protein Homology CDS 1 419 . + 2 ID=cds-TGE04428.1;Parent=gene-C9F07_08060;Dbxref=NCBI_GP:TGE04428.1;Name=TGE04428.1;Note=decatenates replicating daughter chromosomes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456214.1;locus_tag=C9F07_08060;partial=true;product=DNA topoisomerase III;protein_id=TGE04428.1;start_range=.,1;transl_table=11 PYKI01000878.1 Genbank pseudogene 449 1348 . - . ID=gene-C9F07_08065;Name=C9F07_08065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08065;pseudo=true PYKI01000878.1 Protein Homology CDS 449 1348 . - 0 ID=cds-C9F07_08065;Parent=gene-C9F07_08065;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456213.1;locus_tag=C9F07_08065;product=glutamate dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01001364.1 1 1425 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001364.1 Genbank region 1 1425 . + . ID=PYKI01001364.1:1..1425;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001364.1 Genbank pseudogene 92 278 . + . ID=gene-C9F07_12815;Name=C9F07_12815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12815;pseudo=true PYKI01001364.1 Protein Homology CDS 92 278 . + 0 ID=cds-C9F07_12815;Parent=gene-C9F07_12815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219206.1;locus_tag=C9F07_12815;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001364.1 Genbank pseudogene 385 1358 . + . ID=gene-C9F07_12820;Name=C9F07_12820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12820;pseudo=true PYKI01001364.1 Protein Homology CDS 385 1358 . + 0 ID=cds-C9F07_12820;Parent=gene-C9F07_12820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=C9F07_12820;product=HTH-type transcriptional regulator CysB;pseudo=true;transl_table=11 ##sequence-region PYKI01002761.1 1 1424 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002761.1 Genbank region 1 1424 . + . ID=PYKI01002761.1:1..1424;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002761.1 Genbank gene 1 416 . - . ID=gene-C9F07_27575;Name=C9F07_27575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27575;partial=true;start_range=.,1 PYKI01002761.1 Protein Homology CDS 1 416 . - 0 ID=cds-TGD46657.1;Parent=gene-C9F07_27575;Dbxref=NCBI_GP:TGD46657.1;Name=TGD46657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=C9F07_27575;partial=true;product=hypothetical protein;protein_id=TGD46657.1;start_range=.,1;transl_table=11 PYKI01002761.1 Genbank gene 426 1424 . - . ID=gene-C9F07_27580;Name=C9F07_27580;end_range=1424,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27580;partial=true PYKI01002761.1 Protein Homology CDS 426 1424 . - 0 ID=cds-TGD46658.1;Parent=gene-C9F07_27580;Dbxref=NCBI_GP:TGD46658.1;Name=TGD46658.1;end_range=1424,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=C9F07_27580;partial=true;product=glutamate synthase;protein_id=TGD46658.1;transl_table=11 ##sequence-region PYKI01001199.1 1 1423 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001199.1 Genbank region 1 1423 . + . ID=PYKI01001199.1:1..1423;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001199.1 Genbank gene 1 578 . - . ID=gene-C9F07_11225;Name=C9F07_11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11225;partial=true;start_range=.,1 PYKI01001199.1 Protein Homology CDS 1 578 . - 0 ID=cds-TGD91676.1;Parent=gene-C9F07_11225;Dbxref=NCBI_GP:TGD91676.1;Name=TGD91676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=C9F07_11225;partial=true;product=MFS transporter;protein_id=TGD91676.1;start_range=.,1;transl_table=11 PYKI01001199.1 Genbank gene 668 1423 . + . ID=gene-C9F07_11230;Name=C9F07_11230;end_range=1423,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11230;partial=true PYKI01001199.1 Protein Homology CDS 668 1423 . + 0 ID=cds-TGD91675.1;Parent=gene-C9F07_11230;Dbxref=NCBI_GP:TGD91675.1;Name=TGD91675.1;end_range=1423,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458339.1;locus_tag=C9F07_11230;partial=true;product=permease;protein_id=TGD91675.1;transl_table=11 ##sequence-region PYKI01000294.1 1 1421 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000294.1 Genbank region 1 1421 . + . ID=PYKI01000294.1:1..1421;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000294.1 Genbank gene 1 272 . + . ID=gene-C9F07_01935;Name=C9F07_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01935;partial=true;start_range=.,1 PYKI01000294.1 Protein Homology CDS 1 272 . + 2 ID=cds-TGE27809.1;Parent=gene-C9F07_01935;Dbxref=NCBI_GP:TGE27809.1;Name=TGE27809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=C9F07_01935;partial=true;product=capsular polysaccharide biosynthesis protein;protein_id=TGE27809.1;start_range=.,1;transl_table=11 PYKI01000294.1 Genbank gene 358 1421 . - . ID=gene-C9F07_01940;Name=C9F07_01940;end_range=1421,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01940;partial=true PYKI01000294.1 Protein Homology CDS 358 1421 . - 2 ID=cds-TGE27810.1;Parent=gene-C9F07_01940;Dbxref=NCBI_GP:TGE27810.1;Name=TGE27810.1;end_range=1421,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=C9F07_01940;partial=true;product=outer membrane assembly protein AsmA;protein_id=TGE27810.1;transl_table=11 ##sequence-region PYKI01002283.1 1 4242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002283.1 Genbank region 1 4242 . + . ID=PYKI01002283.1:1..4242;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002283.1 Genbank gene 1 346 . + . ID=gene-C9F07_22360;Name=C9F07_22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22360;partial=true;start_range=.,1 PYKI01002283.1 Protein Homology CDS 1 346 . + 1 ID=cds-TGD54842.1;Parent=gene-C9F07_22360;Dbxref=NCBI_GP:TGD54842.1;Name=TGD54842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=C9F07_22360;partial=true;product=4Fe-4S ferredoxin;protein_id=TGD54842.1;start_range=.,1;transl_table=11 PYKI01002283.1 Genbank gene 339 1112 . + . ID=gene-C9F07_22365;Name=C9F07_22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22365 PYKI01002283.1 Protein Homology CDS 339 1112 . + 0 ID=cds-TGD54843.1;Parent=gene-C9F07_22365;Dbxref=NCBI_GP:TGD54843.1;Name=TGD54843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=C9F07_22365;product=dimethyl sulfoxide reductase;protein_id=TGD54843.1;transl_table=11 PYKI01002283.1 Genbank gene 1128 1781 . + . ID=gene-C9F07_22370;Name=C9F07_22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22370 PYKI01002283.1 Protein Homology CDS 1128 1781 . + 0 ID=cds-TGD54844.1;Parent=gene-C9F07_22370;Dbxref=NCBI_GP:TGD54844.1;Name=TGD54844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463173.1;locus_tag=C9F07_22370;product=molecular chaperone;protein_id=TGD54844.1;transl_table=11 PYKI01002283.1 Genbank gene 1865 3265 . - . ID=gene-C9F07_22375;Name=C9F07_22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22375 PYKI01002283.1 Protein Homology CDS 1865 3265 . - 0 ID=cds-TGD54845.1;Parent=gene-C9F07_22375;Dbxref=NCBI_GP:TGD54845.1;Name=TGD54845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=C9F07_22375;product=hypothetical protein;protein_id=TGD54845.1;transl_table=11 PYKI01002283.1 Genbank gene 3569 4242 . + . ID=gene-C9F07_22380;Name=C9F07_22380;end_range=4242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22380;partial=true PYKI01002283.1 Protein Homology CDS 3569 4242 . + 0 ID=cds-TGD54846.1;Parent=gene-C9F07_22380;Dbxref=NCBI_GP:TGD54846.1;Name=TGD54846.1;end_range=4242,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=C9F07_22380;partial=true;product=hypothetical protein;protein_id=TGD54846.1;transl_table=11 ##sequence-region PYKI01002996.1 1 1420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002996.1 Genbank region 1 1420 . + . ID=PYKI01002996.1:1..1420;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002996.1 Genbank gene 1 1306 . - . ID=gene-C9F07_30065;Name=C9F07_30065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30065;partial=true;start_range=.,1 PYKI01002996.1 Protein Homology CDS 1 1306 . - 0 ID=cds-TGD41287.1;Parent=gene-C9F07_30065;Dbxref=NCBI_GP:TGD41287.1;Name=TGD41287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=C9F07_30065;partial=true;product=hypothetical protein;protein_id=TGD41287.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003301.1 1 1420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003301.1 Genbank region 1 1420 . + . ID=PYKI01003301.1:1..1420;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003301.1 Genbank gene 137 814 . - . ID=gene-C9F07_33195;Name=C9F07_33195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33195 PYKI01003301.1 Protein Homology CDS 137 814 . - 0 ID=cds-TGD36046.1;Parent=gene-C9F07_33195;Dbxref=NCBI_GP:TGD36046.1;Name=TGD36046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456575.1;locus_tag=C9F07_33195;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=TGD36046.1;transl_table=11 PYKI01003301.1 Genbank pseudogene 801 1082 . - . ID=gene-C9F07_33200;Name=C9F07_33200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33200;pseudo=true PYKI01003301.1 Protein Homology CDS 801 1082 . - 0 ID=cds-C9F07_33200;Parent=gene-C9F07_33200;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=C9F07_33200;product=energy-coupling factor ABC transporter substrate-binding protein;pseudo=true;transl_table=11 PYKI01003301.1 Genbank gene 1084 1420 . - . ID=gene-C9F07_33205;Name=C9F07_33205;end_range=1420,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33205;partial=true PYKI01003301.1 Protein Homology CDS 1084 1420 . - 1 ID=cds-TGD36047.1;Parent=gene-C9F07_33205;Dbxref=NCBI_GP:TGD36047.1;Name=TGD36047.1;end_range=1420,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=C9F07_33205;partial=true;product=cobalamin biosynthesis protein CbiM;protein_id=TGD36047.1;transl_table=11 ##sequence-region PYKI01001429.1 1 1419 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001429.1 Genbank region 1 1419 . + . ID=PYKI01001429.1:1..1419;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001429.1 Genbank gene 1 598 . - . ID=gene-C9F07_13535;Name=C9F07_13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13535;partial=true;start_range=.,1 PYKI01001429.1 Protein Homology CDS 1 598 . - 0 ID=cds-TGD83715.1;Parent=gene-C9F07_13535;Dbxref=NCBI_GP:TGD83715.1;Name=TGD83715.1;Note=binds the cellulose synthase activator%2C bis-(3'-5') cyclic diguanylic acid (c-di-GMP);gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=C9F07_13535;partial=true;product=cellulose synthase regulator BcsB;protein_id=TGD83715.1;start_range=.,1;transl_table=11 PYKI01001429.1 Genbank pseudogene 609 1262 . - . ID=gene-C9F07_13540;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=pseudogene;locus_tag=C9F07_13540;pseudo=true PYKI01001429.1 Protein Homology CDS 609 1262 . - 0 ID=cds-C9F07_13540;Parent=gene-C9F07_13540;Note=polymerizes uridine 5'-diphosphate glucose to cellulose%3B acts with BcsB%2C BcsZ and BcsC in cellulose biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=bcsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458301.1;locus_tag=C9F07_13540;product=UDP-forming cellulose synthase catalytic subunit;pseudo=true;transl_table=11 PYKI01001429.1 Genbank pseudogene 1291 1419 . - . ID=gene-C9F07_13545;Name=C9F07_13545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13545;pseudo=true PYKI01001429.1 Protein Homology CDS 1291 1419 . - 0 ID=cds-C9F07_13545;Parent=gene-C9F07_13545;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=C9F07_13545;product=propanediol utilization protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003473.1 1 1417 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003473.1 Genbank region 1 1417 . + . ID=PYKI01003473.1:1..1417;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003473.1 Genbank gene 1 645 . + . ID=gene-C9F07_34930;Name=C9F07_34930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34930;partial=true;start_range=.,1 PYKI01003473.1 Protein Homology CDS 1 645 . + 0 ID=cds-TGD32533.1;Parent=gene-C9F07_34930;Dbxref=NCBI_GP:TGD32533.1;Name=TGD32533.1;Note=catalyzes the formation of acetate from pyruvate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532507.1;locus_tag=C9F07_34930;partial=true;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=TGD32533.1;start_range=.,1;transl_table=11 PYKI01003473.1 Genbank pseudogene 684 1361 . + . ID=gene-C9F07_34935;Name=C9F07_34935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34935;pseudo=true PYKI01003473.1 Protein Homology CDS 684 1361 . + 0 ID=cds-C9F07_34935;Parent=gene-C9F07_34935;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=C9F07_34935;product=low-specificity L-threonine aldolase;pseudo=true;transl_table=11 ##sequence-region PYKI01000327.1 1 1417 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000327.1 Genbank region 1 1417 . + . ID=PYKI01000327.1:1..1417;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000327.1 Genbank gene 1 378 . + . ID=gene-C9F07_02295;Name=C9F07_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02295;partial=true;start_range=.,1 PYKI01000327.1 Protein Homology CDS 1 378 . + 0 ID=cds-TGE26871.1;Parent=gene-C9F07_02295;Dbxref=NCBI_GP:TGE26871.1;Name=TGE26871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=C9F07_02295;partial=true;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=TGE26871.1;start_range=.,1;transl_table=11 PYKI01000327.1 Genbank gene 388 1417 . + . ID=gene-C9F07_02300;Name=C9F07_02300;end_range=1417,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02300;partial=true PYKI01000327.1 Protein Homology CDS 388 1417 . + 0 ID=cds-TGE26872.1;Parent=gene-C9F07_02300;Dbxref=NCBI_GP:TGE26872.1;Name=TGE26872.1;end_range=1417,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458795.1;locus_tag=C9F07_02300;partial=true;product=DNA mismatch repair endonuclease MutL;protein_id=TGE26872.1;transl_table=11 ##sequence-region PYKI01001645.1 1 1415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001645.1 Genbank region 1 1415 . + . ID=PYKI01001645.1:1..1415;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001645.1 Genbank pseudogene 1 835 . + . ID=gene-C9F07_15715;Name=C9F07_15715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15715;pseudo=true PYKI01001645.1 Protein Homology CDS 1 835 . + 1 ID=cds-C9F07_15715;Parent=gene-C9F07_15715;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458567.1;locus_tag=C9F07_15715;product=Na+/H+ antiporter;pseudo=true;transl_table=11 PYKI01001645.1 Genbank gene 930 1415 . - . ID=gene-C9F07_15720;Name=C9F07_15720;end_range=1415,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15720;partial=true PYKI01001645.1 Protein Homology CDS 930 1415 . - 0 ID=cds-TGD70312.1;Parent=gene-C9F07_15720;Dbxref=NCBI_GP:TGD70312.1;Name=TGD70312.1;end_range=1415,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458568.1;locus_tag=C9F07_15720;partial=true;product=LysR family transcriptional regulator;protein_id=TGD70312.1;transl_table=11 ##sequence-region PYKI01001957.1 1 1413 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001957.1 Genbank region 1 1413 . + . ID=PYKI01001957.1:1..1413;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001957.1 Genbank gene 1 255 . + . ID=gene-C9F07_18895;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=C9F07_18895;partial=true;start_range=.,1 PYKI01001957.1 Protein Homology CDS 1 255 . + 0 ID=cds-TGD60431.1;Parent=gene-C9F07_18895;Dbxref=NCBI_GP:TGD60431.1;Name=TGD60431.1;gbkey=CDS;gene=cydB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456302.1;locus_tag=C9F07_18895;partial=true;product=cytochrome d ubiquinol oxidase subunit II;protein_id=TGD60431.1;start_range=.,1;transl_table=11 PYKI01001957.1 Genbank gene 268 357 . + . ID=gene-C9F07_18900;Name=C9F07_18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18900 PYKI01001957.1 Protein Homology CDS 268 357 . + 0 ID=cds-TGD60432.1;Parent=gene-C9F07_18900;Dbxref=NCBI_GP:TGD60432.1;Name=TGD60432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=C9F07_18900;product=cytochrome bd-II oxidase subunit CbdX;protein_id=TGD60432.1;transl_table=11 PYKI01001957.1 Genbank gene 752 1413 . + . ID=gene-C9F07_18905;Name=C9F07_18905;end_range=1413,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18905;partial=true PYKI01001957.1 Protein Homology CDS 752 1413 . + 0 ID=cds-TGD60433.1;Parent=gene-C9F07_18905;Dbxref=NCBI_GP:TGD60433.1;Name=TGD60433.1;end_range=1413,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004594268.1;locus_tag=C9F07_18905;partial=true;product=glutamate dehydrogenase;protein_id=TGD60433.1;transl_table=11 ##sequence-region PYKI01002084.1 1 1413 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002084.1 Genbank region 1 1413 . + . ID=PYKI01002084.1:1..1413;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002084.1 Genbank gene 1 1049 . - . ID=gene-C9F07_20215;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=C9F07_20215;partial=true;start_range=.,1 PYKI01002084.1 Protein Homology CDS 1 1049 . - 0 ID=cds-TGD59298.1;Parent=gene-C9F07_20215;Dbxref=NCBI_GP:TGD59298.1;Name=TGD59298.1;gbkey=CDS;gene=atpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=C9F07_20215;partial=true;product=F0F1 ATP synthase subunit alpha;protein_id=TGD59298.1;start_range=.,1;transl_table=11 PYKI01002084.1 Genbank pseudogene 1062 1413 . - . ID=gene-C9F07_20220;Name=C9F07_20220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20220;pseudo=true PYKI01002084.1 Protein Homology CDS 1062 1413 . - 1 ID=cds-C9F07_20220;Parent=gene-C9F07_20220;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=C9F07_20220;product=F0F1 ATP synthase subunit delta;pseudo=true;transl_table=11 ##sequence-region PYKI01002555.1 1 1412 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002555.1 Genbank region 1 1412 . + . ID=PYKI01002555.1:1..1412;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002555.1 Genbank pseudogene 51 275 . + . ID=gene-C9F07_25355;Name=C9F07_25355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25355;pseudo=true PYKI01002555.1 Protein Homology CDS 51 275 . + 0 ID=cds-C9F07_25355;Parent=gene-C9F07_25355;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243176.1;locus_tag=C9F07_25355;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002555.1 Genbank gene 429 887 . - . ID=gene-C9F07_25360;Name=C9F07_25360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25360 PYKI01002555.1 Protein Homology CDS 429 887 . - 0 ID=cds-TGD49889.1;Parent=gene-C9F07_25360;Dbxref=NCBI_GP:TGD49889.1;Name=TGD49889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000020024.1;locus_tag=C9F07_25360;product=hypothetical protein;protein_id=TGD49889.1;transl_table=11 PYKI01002555.1 Genbank gene 904 1296 . - . ID=gene-C9F07_25365;Name=C9F07_25365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25365 PYKI01002555.1 Protein Homology CDS 904 1296 . - 0 ID=cds-TGD49890.1;Parent=gene-C9F07_25365;Dbxref=NCBI_GP:TGD49890.1;Name=TGD49890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331486.1;locus_tag=C9F07_25365;product=hypothetical protein;protein_id=TGD49890.1;transl_table=11 ##sequence-region PYKI01001474.1 1 1408 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001474.1 Genbank region 1 1408 . + . ID=PYKI01001474.1:1..1408;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001474.1 Genbank gene 148 786 . + . ID=gene-C9F07_13990;Name=C9F07_13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13990 PYKI01001474.1 Protein Homology CDS 148 786 . + 0 ID=cds-TGD80211.1;Parent=gene-C9F07_13990;Dbxref=NCBI_GP:TGD80211.1;Name=TGD80211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455616.1;locus_tag=C9F07_13990;product=HTH-type transcriptional regulator RutR;protein_id=TGD80211.1;transl_table=11 PYKI01001474.1 Genbank gene 783 1178 . - . ID=gene-C9F07_13995;Name=C9F07_13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13995 PYKI01001474.1 Protein Homology CDS 783 1178 . - 0 ID=cds-TGD80212.1;Parent=gene-C9F07_13995;Dbxref=NCBI_GP:TGD80212.1;Name=TGD80212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455617.1;locus_tag=C9F07_13995;product=DUF1311 domain-containing protein;protein_id=TGD80212.1;transl_table=11 ##sequence-region PYKI01002692.1 1 4233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002692.1 Genbank region 1 4233 . + . ID=PYKI01002692.1:1..4233;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002692.1 Genbank gene 1 130 . + . ID=gene-C9F07_26815;Name=C9F07_26815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26815;partial=true;start_range=.,1 PYKI01002692.1 Protein Homology CDS 1 130 . + 1 ID=cds-TGD48399.1;Parent=gene-C9F07_26815;Dbxref=NCBI_GP:TGD48399.1;Name=TGD48399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988789.1;locus_tag=C9F07_26815;partial=true;product=Clp protease ClpE;protein_id=TGD48399.1;start_range=.,1;transl_table=11 PYKI01002692.1 Genbank gene 166 657 . + . ID=gene-C9F07_26820;Name=C9F07_26820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26820 PYKI01002692.1 Protein Homology CDS 166 657 . + 0 ID=cds-TGD48400.1;Parent=gene-C9F07_26820;Dbxref=NCBI_GP:TGD48400.1;Name=TGD48400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000709797.1;locus_tag=C9F07_26820;product=fimbrial protein;protein_id=TGD48400.1;transl_table=11 PYKI01002692.1 Genbank gene 880 1695 . + . ID=gene-C9F07_26825;Name=C9F07_26825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26825 PYKI01002692.1 Protein Homology CDS 880 1695 . + 0 ID=cds-TGD48401.1;Parent=gene-C9F07_26825;Dbxref=NCBI_GP:TGD48401.1;Name=TGD48401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000751765.1;locus_tag=C9F07_26825;product=fimbrial protein;protein_id=TGD48401.1;transl_table=11 PYKI01002692.1 Genbank gene 1928 2725 . + . ID=gene-C9F07_26830;Name=C9F07_26830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26830 PYKI01002692.1 Protein Homology CDS 1928 2725 . + 0 ID=cds-TGD48402.1;Parent=gene-C9F07_26830;Dbxref=NCBI_GP:TGD48402.1;Name=TGD48402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704720.1;locus_tag=C9F07_26830;product=fimbrial protein;protein_id=TGD48402.1;transl_table=11 PYKI01002692.1 Genbank gene 2753 3517 . + . ID=gene-C9F07_26835;Name=C9F07_26835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26835 PYKI01002692.1 Protein Homology CDS 2753 3517 . + 0 ID=cds-TGD48403.1;Parent=gene-C9F07_26835;Dbxref=NCBI_GP:TGD48403.1;Name=TGD48403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000827659.1;locus_tag=C9F07_26835;product=fimbrial protein;protein_id=TGD48403.1;transl_table=11 PYKI01002692.1 Genbank gene 3504 3938 . + . ID=gene-C9F07_26840;Name=C9F07_26840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26840 PYKI01002692.1 Protein Homology CDS 3504 3938 . + 0 ID=cds-TGD48404.1;Parent=gene-C9F07_26840;Dbxref=NCBI_GP:TGD48404.1;Name=TGD48404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001020578.1;locus_tag=C9F07_26840;product=hypothetical protein;protein_id=TGD48404.1;transl_table=11 PYKI01002692.1 Genbank gene 3939 4233 . + . ID=gene-C9F07_26845;Name=C9F07_26845;end_range=4233,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26845;partial=true PYKI01002692.1 Protein Homology CDS 3939 4233 . + 0 ID=cds-TGD48405.1;Parent=gene-C9F07_26845;Dbxref=NCBI_GP:TGD48405.1;Name=TGD48405.1;end_range=4233,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576642.1;locus_tag=C9F07_26845;partial=true;product=hypothetical protein;protein_id=TGD48405.1;transl_table=11 ##sequence-region PYKI01003547.1 1 1405 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003547.1 Genbank region 1 1405 . + . ID=PYKI01003547.1:1..1405;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003547.1 Genbank gene 1 325 . + . ID=gene-C9F07_35790;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=C9F07_35790;partial=true;start_range=.,1 PYKI01003547.1 Protein Homology CDS 1 325 . + 1 ID=cds-TGD30831.1;Parent=gene-C9F07_35790;Dbxref=NCBI_GP:TGD30831.1;Name=TGD30831.1;gbkey=CDS;gene=tmk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455693.1;locus_tag=C9F07_35790;partial=true;product=dTMP kinase;protein_id=TGD30831.1;start_range=.,1;transl_table=11 PYKI01003547.1 Genbank gene 322 1326 . + . ID=gene-C9F07_35795;Name=C9F07_35795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35795 PYKI01003547.1 Protein Homology CDS 322 1326 . + 0 ID=cds-TGD30832.1;Parent=gene-C9F07_35795;Dbxref=NCBI_GP:TGD30832.1;Name=TGD30832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455694.1;locus_tag=C9F07_35795;product=DNA polymerase III subunit delta';protein_id=TGD30832.1;transl_table=11 ##sequence-region PYKI01001711.1 1 1405 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001711.1 Genbank region 1 1405 . + . ID=PYKI01001711.1:1..1405;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001711.1 Genbank gene 1 628 . - . ID=gene-C9F07_16335;Name=C9F07_16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16335;partial=true;start_range=.,1 PYKI01001711.1 Protein Homology CDS 1 628 . - 0 ID=cds-TGD69111.1;Parent=gene-C9F07_16335;Dbxref=NCBI_GP:TGD69111.1;Name=TGD69111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456985.1;locus_tag=C9F07_16335;partial=true;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=TGD69111.1;start_range=.,1;transl_table=11 PYKI01001711.1 Genbank gene 730 1266 . + . ID=gene-C9F07_16340;Name=C9F07_16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16340 PYKI01001711.1 Protein Homology CDS 730 1266 . + 0 ID=cds-TGD69112.1;Parent=gene-C9F07_16340;Dbxref=NCBI_GP:TGD69112.1;Name=TGD69112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461384.3;locus_tag=C9F07_16340;product=GNAT family acetyltransferase;protein_id=TGD69112.1;transl_table=11 PYKI01001711.1 Genbank gene 1253 1405 . + . ID=gene-C9F07_16345;Name=C9F07_16345;end_range=1405,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16345;partial=true PYKI01001711.1 Protein Homology CDS 1253 1405 . + 0 ID=cds-TGD69113.1;Parent=gene-C9F07_16345;Dbxref=NCBI_GP:TGD69113.1;Name=TGD69113.1;end_range=1405,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=C9F07_16345;partial=true;product=hypothetical protein;protein_id=TGD69113.1;transl_table=11 ##sequence-region PYKI01001592.1 1 1405 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001592.1 Genbank region 1 1405 . + . ID=PYKI01001592.1:1..1405;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001592.1 Genbank gene 1 602 . + . ID=gene-C9F07_15210;Name=C9F07_15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15210;partial=true;start_range=.,1 PYKI01001592.1 Protein Homology CDS 1 602 . + 2 ID=cds-TGD71999.1;Parent=gene-C9F07_15210;Dbxref=NCBI_GP:TGD71999.1;Name=TGD71999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=C9F07_15210;partial=true;product=galactonate dehydratase;protein_id=TGD71999.1;start_range=.,1;transl_table=11 PYKI01001592.1 Genbank gene 652 1405 . + . ID=gene-C9F07_15215;Name=C9F07_15215;end_range=1405,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15215;partial=true PYKI01001592.1 Protein Homology CDS 652 1405 . + 0 ID=cds-TGD72000.1;Parent=gene-C9F07_15215;Dbxref=NCBI_GP:TGD72000.1;Name=TGD72000.1;end_range=1405,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=C9F07_15215;partial=true;product=2-keto-3-deoxygluconate permease 2;protein_id=TGD72000.1;transl_table=11 ##sequence-region PYKI01001303.1 1 1403 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001303.1 Genbank region 1 1403 . + . ID=PYKI01001303.1:1..1403;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001303.1 Genbank pseudogene 53 127 . + . ID=gene-C9F07_12215;Name=C9F07_12215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12215;pseudo=true PYKI01001303.1 Protein Homology CDS 53 127 . + 0 ID=cds-C9F07_12215;Parent=gene-C9F07_12215;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311252.1;locus_tag=C9F07_12215;product=thiolase;pseudo=true;transl_table=11 PYKI01001303.1 Genbank gene 127 1403 . + . ID=gene-C9F07_12220;Name=fadJ;end_range=1403,.;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=C9F07_12220;partial=true PYKI01001303.1 Protein Homology CDS 127 1403 . + 0 ID=cds-TGD86970.1;Parent=gene-C9F07_12220;Dbxref=NCBI_GP:TGD86970.1;Name=TGD86970.1;Note=multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate;end_range=1403,.;gbkey=CDS;gene=fadJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=C9F07_12220;partial=true;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=TGD86970.1;transl_table=11 ##sequence-region PYKI01001693.1 1 1402 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001693.1 Genbank region 1 1402 . + . ID=PYKI01001693.1:1..1402;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001693.1 Genbank gene 1 871 . + . ID=gene-C9F07_16150;Name=C9F07_16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16150;partial=true;start_range=.,1 PYKI01001693.1 Protein Homology CDS 1 871 . + 1 ID=cds-TGD69715.1;Parent=gene-C9F07_16150;Dbxref=NCBI_GP:TGD69715.1;Name=TGD69715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458519.1;locus_tag=C9F07_16150;partial=true;product=glucose-6-phosphate isomerase;protein_id=TGD69715.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001633.1 1 1394 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001633.1 Genbank region 1 1394 . + . ID=PYKI01001633.1:1..1394;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001633.1 Genbank gene 52 1023 . + . ID=gene-C9F07_15600;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=C9F07_15600 PYKI01001633.1 Protein Homology CDS 52 1023 . + 0 ID=cds-TGD70452.1;Parent=gene-C9F07_15600;Dbxref=NCBI_GP:TGD70452.1;Name=TGD70452.1;gbkey=CDS;gene=glpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016154382.1;locus_tag=C9F07_15600;product=fructose-bisphosphatase class II;protein_id=TGD70452.1;transl_table=11 PYKI01001633.1 Genbank gene 1017 1205 . + . ID=gene-C9F07_15605;Name=C9F07_15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15605 PYKI01001633.1 Protein Homology CDS 1017 1205 . + 0 ID=cds-TGD70453.1;Parent=gene-C9F07_15605;Dbxref=NCBI_GP:TGD70453.1;Name=TGD70453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001327531.1;locus_tag=C9F07_15605;product=hypothetical protein;protein_id=TGD70453.1;transl_table=11 PYKI01001633.1 Genbank gene 1237 1394 . + . ID=gene-C9F07_15610;Name=C9F07_15610;end_range=1394,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15610;partial=true PYKI01001633.1 Protein Homology CDS 1237 1394 . + 0 ID=cds-TGD70454.1;Parent=gene-C9F07_15610;Dbxref=NCBI_GP:TGD70454.1;Name=TGD70454.1;end_range=1394,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417404.1;locus_tag=C9F07_15610;partial=true;product=transcriptional regulator;protein_id=TGD70454.1;transl_table=11 ##sequence-region PYKI01001467.1 1 1394 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001467.1 Genbank region 1 1394 . + . ID=PYKI01001467.1:1..1394;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001467.1 Genbank gene 1 516 . - . ID=gene-C9F07_13905;Name=C9F07_13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13905;partial=true;start_range=.,1 PYKI01001467.1 Protein Homology CDS 1 516 . - 0 ID=cds-TGD81148.1;Parent=gene-C9F07_13905;Dbxref=NCBI_GP:TGD81148.1;Name=TGD81148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457507.1;locus_tag=C9F07_13905;partial=true;product=hypothetical protein;protein_id=TGD81148.1;start_range=.,1;transl_table=11 PYKI01001467.1 Genbank pseudogene 643 868 . + . ID=gene-C9F07_13910;Name=C9F07_13910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13910;pseudo=true PYKI01001467.1 Protein Homology CDS 643 868 . + 0 ID=cds-C9F07_13910;Parent=gene-C9F07_13910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219228.1;locus_tag=C9F07_13910;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001467.1 Genbank gene 942 1394 . + . ID=gene-C9F07_13915;Name=C9F07_13915;end_range=1394,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13915;partial=true PYKI01001467.1 Protein Homology CDS 942 1394 . + 0 ID=cds-TGD81149.1;Parent=gene-C9F07_13915;Dbxref=NCBI_GP:TGD81149.1;Name=TGD81149.1;end_range=1394,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=C9F07_13915;partial=true;product=ornithine decarboxylase;protein_id=TGD81149.1;transl_table=11 ##sequence-region PYKI01002101.1 1 1394 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002101.1 Genbank region 1 1394 . + . ID=PYKI01002101.1:1..1394;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002101.1 Genbank gene 1 375 . - . ID=gene-C9F07_20395;Name=C9F07_20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20395;partial=true;start_range=.,1 PYKI01002101.1 Protein Homology CDS 1 375 . - 0 ID=cds-TGD58782.1;Parent=gene-C9F07_20395;Dbxref=NCBI_GP:TGD58782.1;Name=TGD58782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457037.1;locus_tag=C9F07_20395;partial=true;product=exopolyphosphatase;protein_id=TGD58782.1;start_range=.,1;transl_table=11 PYKI01002101.1 Genbank gene 380 1394 . - . ID=gene-C9F07_20400;Name=ppk1;end_range=1394,.;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=C9F07_20400;partial=true PYKI01002101.1 Protein Homology CDS 380 1394 . - 1 ID=cds-TGD58783.1;Parent=gene-C9F07_20400;Dbxref=NCBI_GP:TGD58783.1;Name=TGD58783.1;end_range=1394,.;gbkey=CDS;gene=ppk1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014728313.1;locus_tag=C9F07_20400;partial=true;product=polyphosphate kinase 1;protein_id=TGD58783.1;transl_table=11 ##sequence-region PYKI01003283.1 1 1393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003283.1 Genbank region 1 1393 . + . ID=PYKI01003283.1:1..1393;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003283.1 Genbank gene 1 431 . + . ID=gene-C9F07_33015;Name=C9F07_33015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33015;partial=true;start_range=.,1 PYKI01003283.1 Protein Homology CDS 1 431 . + 2 ID=cds-TGD36136.1;Parent=gene-C9F07_33015;Dbxref=NCBI_GP:TGD36136.1;Name=TGD36136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=C9F07_33015;partial=true;product=DNA-binding transcriptional regulator;protein_id=TGD36136.1;start_range=.,1;transl_table=11 PYKI01003283.1 Genbank gene 515 841 . - . ID=gene-C9F07_33020;Name=C9F07_33020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33020 PYKI01003283.1 Protein Homology CDS 515 841 . - 0 ID=cds-TGD36137.1;Parent=gene-C9F07_33020;Dbxref=NCBI_GP:TGD36137.1;Name=TGD36137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457201.1;locus_tag=C9F07_33020;product=DUF883 domain-containing protein;protein_id=TGD36137.1;transl_table=11 PYKI01003283.1 Genbank gene 1003 1308 . + . ID=gene-C9F07_33025;Name=C9F07_33025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33025 PYKI01003283.1 Protein Homology CDS 1003 1308 . + 0 ID=cds-TGD36138.1;Parent=gene-C9F07_33025;Dbxref=NCBI_GP:TGD36138.1;Name=TGD36138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457200.1;locus_tag=C9F07_33025;product=hypothetical protein;protein_id=TGD36138.1;transl_table=11 ##sequence-region PYKI01000608.1 1 1393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000608.1 Genbank region 1 1393 . + . ID=PYKI01000608.1:1..1393;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000608.1 Genbank gene 1 782 . - . ID=gene-C9F07_05200;Name=C9F07_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05200;partial=true;start_range=.,1 PYKI01000608.1 Protein Homology CDS 1 782 . - 0 ID=cds-TGE13958.1;Parent=gene-C9F07_05200;Dbxref=NCBI_GP:TGE13958.1;Name=TGE13958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=C9F07_05200;partial=true;product=quercetin 2%2C3-dioxygenase;protein_id=TGE13958.1;start_range=.,1;transl_table=11 PYKI01000608.1 Genbank gene 891 1393 . + . ID=gene-C9F07_05205;Name=C9F07_05205;end_range=1393,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05205;partial=true PYKI01000608.1 Protein Homology CDS 891 1393 . + 0 ID=cds-TGE13959.1;Parent=gene-C9F07_05205;Dbxref=NCBI_GP:TGE13959.1;Name=TGE13959.1;end_range=1393,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455441.1;locus_tag=C9F07_05205;partial=true;product=LysR family transcriptional regulator;protein_id=TGE13959.1;transl_table=11 ##sequence-region PYKI01001534.1 1 4226 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001534.1 Genbank region 1 4226 . + . ID=PYKI01001534.1:1..4226;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001534.1 Genbank gene 1 429 . - . ID=gene-C9F07_14680;Name=C9F07_14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14680;partial=true;start_range=.,1 PYKI01001534.1 Protein Homology CDS 1 429 . - 0 ID=cds-TGD75969.1;Parent=gene-C9F07_14680;Dbxref=NCBI_GP:TGD75969.1;Name=TGD75969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=C9F07_14680;partial=true;product=GNAT family N-acetyltransferase;protein_id=TGD75969.1;start_range=.,1;transl_table=11 PYKI01001534.1 Genbank gene 624 1811 . + . ID=gene-C9F07_14685;Name=C9F07_14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14685 PYKI01001534.1 Protein Homology CDS 624 1811 . + 0 ID=cds-TGD75970.1;Parent=gene-C9F07_14685;Dbxref=NCBI_GP:TGD75970.1;Name=TGD75970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=C9F07_14685;product=DUF898 domain-containing protein;protein_id=TGD75970.1;transl_table=11 PYKI01001534.1 Genbank pseudogene 1953 4148 . - . ID=gene-C9F07_14690;Name=valS;gbkey=Gene;gene=valS;gene_biotype=pseudogene;locus_tag=C9F07_14690;pseudo=true PYKI01001534.1 Protein Homology CDS 1953 4148 . - 0 ID=cds-C9F07_14690;Parent=gene-C9F07_14690;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=valS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=C9F07_14690;product=valine--tRNA ligase;pseudo=true;transl_table=11 ##sequence-region PYKI01001371.1 1 1392 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001371.1 Genbank region 1 1392 . + . ID=PYKI01001371.1:1..1392;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001371.1 Genbank gene 1 322 . - . ID=gene-C9F07_12895;Name=C9F07_12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12895;partial=true;start_range=.,1 PYKI01001371.1 Protein Homology CDS 1 322 . - 0 ID=cds-TGD84761.1;Parent=gene-C9F07_12895;Dbxref=NCBI_GP:TGD84761.1;Name=TGD84761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001671728.1;locus_tag=C9F07_12895;partial=true;product=sulfate transporter subunit;protein_id=TGD84761.1;start_range=.,1;transl_table=11 PYKI01001371.1 Genbank gene 559 1392 . - . ID=gene-C9F07_12900;Name=C9F07_12900;end_range=1392,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12900;partial=true PYKI01001371.1 Protein Homology CDS 559 1392 . - 0 ID=cds-TGD84760.1;Parent=gene-C9F07_12900;Dbxref=NCBI_GP:TGD84760.1;Name=TGD84760.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;end_range=1392,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457989.1;locus_tag=C9F07_12900;partial=true;product=ATP-dependent 6-phosphofructokinase;protein_id=TGD84760.1;transl_table=11 ##sequence-region PYKI01003171.1 1 1391 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003171.1 Genbank region 1 1391 . + . ID=PYKI01003171.1:1..1391;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003171.1 Genbank gene 1 167 . + . ID=gene-C9F07_31825;Name=C9F07_31825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31825;partial=true;start_range=.,1 PYKI01003171.1 Protein Homology CDS 1 167 . + 2 ID=cds-TGD37975.1;Parent=gene-C9F07_31825;Dbxref=NCBI_GP:TGD37975.1;Name=TGD37975.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310550.1;locus_tag=C9F07_31825;partial=true;product=L-serine ammonia-lyase;protein_id=TGD37975.1;start_range=.,1;transl_table=11 PYKI01003171.1 Genbank gene 305 1391 . + . ID=gene-C9F07_31830;Name=C9F07_31830;end_range=1391,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31830;partial=true PYKI01003171.1 Protein Homology CDS 305 1391 . + 0 ID=cds-TGD37976.1;Parent=gene-C9F07_31830;Dbxref=NCBI_GP:TGD37976.1;Name=TGD37976.1;end_range=1391,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456334.1;locus_tag=C9F07_31830;partial=true;product=cyclic diguanylate phosphodiesterase;protein_id=TGD37976.1;transl_table=11 ##sequence-region PYKI01000720.1 1 1389 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000720.1 Genbank region 1 1389 . + . ID=PYKI01000720.1:1..1389;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000720.1 Genbank gene 1 135 . - . ID=gene-C9F07_06305;Name=C9F07_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06305;partial=true;start_range=.,1 PYKI01000720.1 Protein Homology CDS 1 135 . - 0 ID=cds-TGE11205.1;Parent=gene-C9F07_06305;Dbxref=NCBI_GP:TGE11205.1;Name=TGE11205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458821.1;locus_tag=C9F07_06305;partial=true;product=xylulose 5-phosphate 3-epimerase;protein_id=TGE11205.1;start_range=.,1;transl_table=11 PYKI01000720.1 Genbank gene 145 795 . - . ID=gene-C9F07_06310;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=C9F07_06310 PYKI01000720.1 Protein Homology CDS 145 795 . - 0 ID=cds-TGE11202.1;Parent=gene-C9F07_06310;Dbxref=NCBI_GP:TGE11202.1;Name=TGE11202.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=C9F07_06310;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=TGE11202.1;transl_table=11 PYKI01000720.1 Genbank gene 809 1273 . - . ID=gene-C9F07_06315;Name=C9F07_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06315 PYKI01000720.1 Protein Homology CDS 809 1273 . - 0 ID=cds-TGE11203.1;Parent=gene-C9F07_06315;Dbxref=NCBI_GP:TGE11203.1;Name=TGE11203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=C9F07_06315;product=PTS ascorbate transporter subunit IIA;protein_id=TGE11203.1;transl_table=11 PYKI01000720.1 Genbank gene 1283 1389 . - . ID=gene-C9F07_06320;Name=C9F07_06320;end_range=1389,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06320;partial=true PYKI01000720.1 Protein Homology CDS 1283 1389 . - 2 ID=cds-TGE11204.1;Parent=gene-C9F07_06320;Dbxref=NCBI_GP:TGE11204.1;Name=TGE11204.1;end_range=1389,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=C9F07_06320;partial=true;product=PTS ascorbate transporter subunit IIB;protein_id=TGE11204.1;transl_table=11 ##sequence-region PYKI01001672.1 1 1388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001672.1 Genbank region 1 1388 . + . ID=PYKI01001672.1:1..1388;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001672.1 Genbank pseudogene 92 250 . + . ID=gene-C9F07_15955;Name=C9F07_15955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15955;pseudo=true PYKI01001672.1 Protein Homology CDS 92 250 . + 0 ID=cds-C9F07_15955;Parent=gene-C9F07_15955;Note=catalyzes the formation of pyruvate from D-cysteine%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=C9F07_15955;product=D-cysteine desulfhydrase;pseudo=true;transl_table=11 PYKI01001672.1 Genbank gene 271 939 . + . ID=gene-C9F07_15960;Name=C9F07_15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15960 PYKI01001672.1 Protein Homology CDS 271 939 . + 0 ID=cds-TGD70109.1;Parent=gene-C9F07_15960;Dbxref=NCBI_GP:TGD70109.1;Name=TGD70109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456515.1;locus_tag=C9F07_15960;product=amino acid ABC transporter permease;protein_id=TGD70109.1;transl_table=11 PYKI01001672.1 Genbank gene 936 1388 . + . ID=gene-C9F07_15965;Name=C9F07_15965;end_range=1388,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15965;partial=true PYKI01001672.1 Protein Homology CDS 936 1388 . + 0 ID=cds-TGD70110.1;Parent=gene-C9F07_15965;Dbxref=NCBI_GP:TGD70110.1;Name=TGD70110.1;end_range=1388,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456514.1;locus_tag=C9F07_15965;partial=true;product=cysteine ABC transporter ATP-binding protein;protein_id=TGD70110.1;transl_table=11 ##sequence-region PYKI01000832.1 1 1387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000832.1 Genbank region 1 1387 . + . ID=PYKI01000832.1:1..1387;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000832.1 Genbank gene 1 651 . - . ID=gene-C9F07_07590;Name=C9F07_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07590;partial=true;start_range=.,1 PYKI01000832.1 Protein Homology CDS 1 651 . - 0 ID=cds-TGE07224.1;Parent=gene-C9F07_07590;Dbxref=NCBI_GP:TGE07224.1;Name=TGE07224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=C9F07_07590;partial=true;product=cytoplasmic protein;protein_id=TGE07224.1;start_range=.,1;transl_table=11 PYKI01000832.1 Genbank pseudogene 787 1371 . + . ID=gene-C9F07_07595;Name=C9F07_07595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07595;pseudo=true PYKI01000832.1 Protein Homology CDS 787 1371 . + 0 ID=cds-C9F07_07595;Parent=gene-C9F07_07595;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457950.1;locus_tag=C9F07_07595;product=multifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase;pseudo=true;transl_table=11 ##sequence-region PYKI01001041.1 1 1387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001041.1 Genbank region 1 1387 . + . ID=PYKI01001041.1:1..1387;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001041.1 Genbank gene 1 907 . - . ID=gene-C9F07_09580;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=C9F07_09580;partial=true;start_range=.,1 PYKI01001041.1 Protein Homology CDS 1 907 . - 0 ID=cds-TGD96706.1;Parent=gene-C9F07_09580;Dbxref=NCBI_GP:TGD96706.1;Name=TGD96706.1;Note=formate hydrogenlyase subunit 5%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=C9F07_09580;partial=true;product=hydrogenase 3 large subunit;protein_id=TGD96706.1;start_range=.,1;transl_table=11 PYKI01001041.1 Genbank pseudogene 925 1329 . - . ID=gene-C9F07_09585;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=pseudogene;locus_tag=C9F07_09585;pseudo=true PYKI01001041.1 Protein Homology CDS 925 1329 . - 0 ID=cds-C9F07_09585;Parent=gene-C9F07_09585;Note=formate hydrogenlyase subunit 4%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=hycD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457244.1;locus_tag=C9F07_09585;product=hydrogenase 3 membrane subunit;pseudo=true;transl_table=11 ##sequence-region PYKI01001005.1 1 1386 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001005.1 Genbank region 1 1386 . + . ID=PYKI01001005.1:1..1386;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001005.1 Genbank gene 18 596 . + . ID=gene-C9F07_09225;Name=C9F07_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09225 PYKI01001005.1 Protein Homology CDS 18 596 . + 0 ID=cds-TGD98448.1;Parent=gene-C9F07_09225;Dbxref=NCBI_GP:TGD98448.1;Name=TGD98448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001702135.1;locus_tag=C9F07_09225;product=hypothetical protein;protein_id=TGD98448.1;transl_table=11 PYKI01001005.1 Genbank gene 593 1386 . + . ID=gene-C9F07_09230;Name=C9F07_09230;end_range=1386,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09230;partial=true PYKI01001005.1 Protein Homology CDS 593 1386 . + 0 ID=cds-TGD98447.1;Parent=gene-C9F07_09230;Dbxref=NCBI_GP:TGD98447.1;Name=TGD98447.1;end_range=1386,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458369.1;locus_tag=C9F07_09230;partial=true;product=phosphotriesterase-related protein;protein_id=TGD98447.1;transl_table=11 ##sequence-region PYKI01002399.1 1 1386 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002399.1 Genbank region 1 1386 . + . ID=PYKI01002399.1:1..1386;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002399.1 Genbank gene 1 434 . - . ID=gene-C9F07_23615;Name=C9F07_23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23615;partial=true;start_range=.,1 PYKI01002399.1 Protein Homology CDS 1 434 . - 0 ID=cds-TGD51969.1;Parent=gene-C9F07_23615;Dbxref=NCBI_GP:TGD51969.1;Name=TGD51969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=C9F07_23615;partial=true;product=colanic acid exporter;protein_id=TGD51969.1;start_range=.,1;transl_table=11 PYKI01002399.1 Genbank pseudogene 567 1340 . - . ID=gene-C9F07_23620;Name=C9F07_23620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23620;pseudo=true PYKI01002399.1 Protein Homology CDS 567 1340 . - 0 ID=cds-C9F07_23620;Parent=gene-C9F07_23620;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310879.1;locus_tag=C9F07_23620;product=undecaprenyl-phosphate glucose phosphotransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01002185.1 1 1386 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002185.1 Genbank region 1 1386 . + . ID=PYKI01002185.1:1..1386;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002185.1 Genbank pseudogene 1 417 . - . ID=gene-C9F07_21225;Name=C9F07_21225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21225;pseudo=true PYKI01002185.1 Protein Homology CDS 1 417 . - 0 ID=cds-C9F07_21225;Parent=gene-C9F07_21225;Note=3' incision activity%3B acts with UvrC%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456203.1;locus_tag=C9F07_21225;product=endonuclease;pseudo=true;transl_table=11 PYKI01002185.1 Genbank gene 511 1338 . - . ID=gene-C9F07_21230;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=C9F07_21230 PYKI01002185.1 Protein Homology CDS 511 1338 . - 0 ID=cds-TGD56816.1;Parent=gene-C9F07_21230;Dbxref=NCBI_GP:TGD56816.1;Name=TGD56816.1;Note=catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;gene=nadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=C9F07_21230;product=NAD(+) synthetase;protein_id=TGD56816.1;transl_table=11 ##sequence-region PYKI01000532.1 1 1385 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000532.1 Genbank region 1 1385 . + . ID=PYKI01000532.1:1..1385;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000532.1 Genbank gene 1 846 . - . ID=gene-C9F07_04415;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=C9F07_04415;partial=true;start_range=.,1 PYKI01000532.1 Protein Homology CDS 1 846 . - 0 ID=cds-TGE15911.1;Parent=gene-C9F07_04415;Dbxref=NCBI_GP:TGE15911.1;Name=TGE15911.1;gbkey=CDS;gene=pncB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=C9F07_04415;partial=true;product=nicotinate phosphoribosyltransferase;protein_id=TGE15911.1;start_range=.,1;transl_table=11 PYKI01000532.1 Genbank gene 1113 1385 . + . ID=gene-C9F07_04420;Name=pepN;end_range=1385,.;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=C9F07_04420;partial=true PYKI01000532.1 Protein Homology CDS 1113 1385 . + 0 ID=cds-TGE15912.1;Parent=gene-C9F07_04420;Dbxref=NCBI_GP:TGE15912.1;Name=TGE15912.1;end_range=1385,.;gbkey=CDS;gene=pepN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=C9F07_04420;partial=true;product=aminopeptidase N;protein_id=TGE15912.1;transl_table=11 ##sequence-region PYKI01003366.1 1 4222 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003366.1 Genbank region 1 4222 . + . ID=PYKI01003366.1:1..4222;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003366.1 Genbank gene 1 1267 . - . ID=gene-C9F07_33910;Name=C9F07_33910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33910;partial=true;start_range=.,1 PYKI01003366.1 Protein Homology CDS 1 1267 . - 0 ID=cds-TGD34714.1;Parent=gene-C9F07_33910;Dbxref=NCBI_GP:TGD34714.1;Name=TGD34714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=C9F07_33910;partial=true;product=phosphotransferase RcsD;protein_id=TGD34714.1;start_range=.,1;transl_table=11 PYKI01003366.1 Genbank gene 1434 1721 . - . ID=gene-C9F07_33915;Name=C9F07_33915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33915 PYKI01003366.1 Protein Homology CDS 1434 1721 . - 0 ID=cds-TGD34711.1;Parent=gene-C9F07_33915;Dbxref=NCBI_GP:TGD34711.1;Name=TGD34711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540996.1;locus_tag=C9F07_33915;product=hypothetical protein;protein_id=TGD34711.1;transl_table=11 PYKI01003366.1 Genbank gene 1995 3131 . + . ID=gene-C9F07_33920;Name=C9F07_33920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33920 PYKI01003366.1 Protein Homology CDS 1995 3131 . + 0 ID=cds-TGD34712.1;Parent=gene-C9F07_33920;Dbxref=NCBI_GP:TGD34712.1;Name=TGD34712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456812.1;locus_tag=C9F07_33920;product=phosphoporin PhoE;protein_id=TGD34712.1;transl_table=11 PYKI01003366.1 Genbank gene 3246 4222 . + . ID=gene-C9F07_33925;Name=C9F07_33925;end_range=4222,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33925;partial=true PYKI01003366.1 Protein Homology CDS 3246 4222 . + 0 ID=cds-TGD34713.1;Parent=gene-C9F07_33925;Dbxref=NCBI_GP:TGD34713.1;Name=TGD34713.1;end_range=4222,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456811.1;locus_tag=C9F07_33925;partial=true;product=FAD:protein FMN transferase ApbE;protein_id=TGD34713.1;transl_table=11 ##sequence-region PYKI01000732.1 1 1384 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000732.1 Genbank region 1 1384 . + . ID=PYKI01000732.1:1..1384;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000732.1 Genbank gene 1 113 . + . ID=gene-C9F07_06435;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=C9F07_06435;partial=true;start_range=.,1 PYKI01000732.1 Protein Homology CDS 1 113 . + 2 ID=cds-TGE10900.1;Parent=gene-C9F07_06435;Dbxref=NCBI_GP:TGE10900.1;Name=TGE10900.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=C9F07_06435;partial=true;product=3-oxoacyl-ACP reductase;protein_id=TGE10900.1;start_range=.,1;transl_table=11 PYKI01000732.1 Genbank gene 269 505 . + . ID=gene-C9F07_06440;Name=C9F07_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06440 PYKI01000732.1 Protein Homology CDS 269 505 . + 0 ID=cds-TGE10901.1;Parent=gene-C9F07_06440;Dbxref=NCBI_GP:TGE10901.1;Name=TGE10901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309499.1;locus_tag=C9F07_06440;product=acyl carrier protein;protein_id=TGE10901.1;transl_table=11 PYKI01000732.1 Genbank gene 591 1384 . + . ID=gene-C9F07_06445;Name=C9F07_06445;end_range=1384,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06445;partial=true PYKI01000732.1 Protein Homology CDS 591 1384 . + 0 ID=cds-TGE10902.1;Parent=gene-C9F07_06445;Dbxref=NCBI_GP:TGE10902.1;Name=TGE10902.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;end_range=1384,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129014.1;locus_tag=C9F07_06445;partial=true;product=beta-ketoacyl-ACP synthase II;protein_id=TGE10902.1;transl_table=11 ##sequence-region PYKI01003580.1 1 1382 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003580.1 Genbank region 1 1382 . + . ID=PYKI01003580.1:1..1382;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003580.1 Genbank gene 1 1382 . + . ID=gene-C9F07_36130;Name=C9F07_36130;end_range=1382,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36130;partial=true;start_range=.,1 PYKI01003580.1 Protein Homology CDS 1 1382 . + 0 ID=cds-TGD30077.1;Parent=gene-C9F07_36130;Dbxref=NCBI_GP:TGD30077.1;Name=TGD30077.1;end_range=1382,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131976.1;locus_tag=C9F07_36130;partial=true;product=flagellar biosynthesis protein FlhA;protein_id=TGD30077.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002706.1 1 1352 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002706.1 Genbank region 1 1352 . + . ID=PYKI01002706.1:1..1352;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002706.1 Genbank pseudogene 31 789 . + . ID=gene-C9F07_26990;Name=C9F07_26990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26990;pseudo=true PYKI01002706.1 Protein Homology CDS 31 789 . + 0 ID=cds-C9F07_26990;Parent=gene-C9F07_26990;Note=in Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=C9F07_26990;product=succinate-semialdehyde dehydrogenase;pseudo=true;transl_table=11 PYKI01002706.1 Genbank pseudogene 887 1027 . - . ID=gene-C9F07_26995;Name=C9F07_26995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26995;pseudo=true PYKI01002706.1 Protein Homology CDS 887 1027 . - 0 ID=cds-C9F07_26995;Parent=gene-C9F07_26995;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=C9F07_26995;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002706.1 Genbank gene 994 1158 . + . ID=gene-C9F07_27000;Name=C9F07_27000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27000 PYKI01002706.1 Protein Homology CDS 994 1158 . + 0 ID=cds-TGD48071.1;Parent=gene-C9F07_27000;Dbxref=NCBI_GP:TGD48071.1;Name=TGD48071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=C9F07_27000;product=DUF1127 domain-containing protein;protein_id=TGD48071.1;transl_table=11 ##sequence-region PYKI01002337.1 1 1381 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002337.1 Genbank region 1 1381 . + . ID=PYKI01002337.1:1..1381;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002337.1 Genbank gene 1 246 . + . ID=gene-C9F07_22925;Name=C9F07_22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22925;partial=true;start_range=.,1 PYKI01002337.1 Protein Homology CDS 1 246 . + 0 ID=cds-TGD53624.1;Parent=gene-C9F07_22925;Dbxref=NCBI_GP:TGD53624.1;Name=TGD53624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457157.1;locus_tag=C9F07_22925;partial=true;product=SsrA-binding protein;protein_id=TGD53624.1;start_range=.,1;transl_table=11 PYKI01002337.1 Genbank gene 861 1381 . + . ID=gene-C9F07_22930;Name=C9F07_22930;end_range=1381,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22930;partial=true PYKI01002337.1 Protein Homology CDS 861 1381 . + 0 ID=cds-TGD53625.1;Parent=gene-C9F07_22930;Dbxref=NCBI_GP:TGD53625.1;Name=TGD53625.1;end_range=1381,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001714616.1;locus_tag=C9F07_22930;partial=true;product=hypothetical protein;protein_id=TGD53625.1;transl_table=11 ##sequence-region PYKI01001932.1 1 1381 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001932.1 Genbank region 1 1381 . + . ID=PYKI01001932.1:1..1381;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001932.1 Genbank gene 1 1381 . + . ID=gene-C9F07_18640;Name=C9F07_18640;end_range=1381,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18640;partial=true;start_range=.,1 PYKI01001932.1 Protein Homology CDS 1 1381 . + 1 ID=cds-TGD60796.1;Parent=gene-C9F07_18640;Dbxref=NCBI_GP:TGD60796.1;Name=TGD60796.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;end_range=1381,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456804.1;locus_tag=C9F07_18640;partial=true;product=periplasmic nitrate reductase subunit alpha;protein_id=TGD60796.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001070.1 1 1377 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001070.1 Genbank region 1 1377 . + . ID=PYKI01001070.1:1..1377;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001070.1 Genbank pseudogene 1 1377 . - . ID=gene-C9F07_09895;Name=C9F07_09895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09895;pseudo=true PYKI01001070.1 Protein Homology CDS 1 1377 . - 0 ID=cds-C9F07_09895;Parent=gene-C9F07_09895;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=C9F07_09895;product=DNA primase;pseudo=true;transl_table=11 ##sequence-region PYKI01001031.1 1 1377 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001031.1 Genbank region 1 1377 . + . ID=PYKI01001031.1:1..1377;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001031.1 Genbank pseudogene 69 884 . - . ID=gene-C9F07_09510;Name=C9F07_09510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09510;pseudo=true PYKI01001031.1 Protein Homology CDS 69 884 . - 0 ID=cds-C9F07_09510;Parent=gene-C9F07_09510;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=C9F07_09510;product=dihydroxy-acid dehydratase;pseudo=true;transl_table=11 PYKI01001031.1 Genbank gene 1042 1377 . - . ID=gene-C9F07_09515;Name=C9F07_09515;end_range=1377,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09515;partial=true PYKI01001031.1 Protein Homology CDS 1042 1377 . - 0 ID=cds-TGD97062.1;Parent=gene-C9F07_09515;Dbxref=NCBI_GP:TGD97062.1;Name=TGD97062.1;end_range=1377,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457845.1;locus_tag=C9F07_09515;partial=true;product=branched chain amino acid aminotransferase;protein_id=TGD97062.1;transl_table=11 ##sequence-region PYKI01002609.1 1 1377 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002609.1 Genbank region 1 1377 . + . ID=PYKI01002609.1:1..1377;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002609.1 Genbank pseudogene 108 584 . + . ID=gene-C9F07_25905;Name=C9F07_25905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25905;pseudo=true PYKI01002609.1 Protein Homology CDS 108 584 . + 0 ID=cds-C9F07_25905;Parent=gene-C9F07_25905;Note=catalyzes the formation of glutamate from glutamine%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=C9F07_25905;product=glutaminase;pseudo=true;transl_table=11 PYKI01002609.1 Genbank gene 584 943 . + . ID=gene-C9F07_25910;Name=C9F07_25910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25910 PYKI01002609.1 Protein Homology CDS 584 943 . + 0 ID=cds-TGD49578.1;Parent=gene-C9F07_25910;Dbxref=NCBI_GP:TGD49578.1;Name=TGD49578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=C9F07_25910;product=DUF4186 domain-containing protein;protein_id=TGD49578.1;transl_table=11 PYKI01002609.1 Genbank gene 1167 1377 . + . ID=gene-C9F07_25915;Name=C9F07_25915;end_range=1377,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25915;partial=true PYKI01002609.1 Protein Homology CDS 1167 1377 . + 0 ID=cds-TGD49579.1;Parent=gene-C9F07_25915;Dbxref=NCBI_GP:TGD49579.1;Name=TGD49579.1;end_range=1377,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455954.1;locus_tag=C9F07_25915;partial=true;product=hypothetical protein;protein_id=TGD49579.1;transl_table=11 ##sequence-region PYKI01000822.1 1 4206 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000822.1 Genbank region 1 4206 . + . ID=PYKI01000822.1:1..4206;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000822.1 Genbank gene 1 1251 . + . ID=gene-C9F07_07435;Name=C9F07_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07435;partial=true;start_range=.,1 PYKI01000822.1 Protein Homology CDS 1 1251 . + 0 ID=cds-TGE07364.1;Parent=gene-C9F07_07435;Dbxref=NCBI_GP:TGE07364.1;Name=TGE07364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457916.1;locus_tag=C9F07_07435;partial=true;product=DNA-directed RNA polymerase subunit beta';protein_id=TGE07364.1;start_range=.,1;transl_table=11 PYKI01000822.1 Genbank pseudogene 1334 1611 . + . ID=gene-C9F07_07440;Name=C9F07_07440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07440;pseudo=true PYKI01000822.1 Protein Homology CDS 1334 1611 . + 0 ID=cds-C9F07_07440;Parent=gene-C9F07_07440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001110911.1;locus_tag=C9F07_07440;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000822.1 Genbank pseudogene 1613 1956 . - . ID=gene-C9F07_07445;Name=C9F07_07445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07445;pseudo=true PYKI01000822.1 Protein Homology CDS 1613 1956 . - 0 ID=cds-C9F07_07445;Parent=gene-C9F07_07445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=C9F07_07445;product=cytoplasmic protein;pseudo=true;transl_table=11 PYKI01000822.1 Genbank gene 2029 2271 . + . ID=gene-C9F07_07450;Name=C9F07_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07450 PYKI01000822.1 Protein Homology CDS 2029 2271 . + 0 ID=cds-TGE07365.1;Parent=gene-C9F07_07450;Dbxref=NCBI_GP:TGE07365.1;Name=TGE07365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219456.1;locus_tag=C9F07_07450;product=hypothetical protein;protein_id=TGE07365.1;transl_table=11 PYKI01000822.1 Genbank gene 2337 3365 . + . ID=gene-C9F07_07455;Name=C9F07_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07455 PYKI01000822.1 Protein Homology CDS 2337 3365 . + 0 ID=cds-TGE07366.1;Parent=gene-C9F07_07455;Dbxref=NCBI_GP:TGE07366.1;Name=TGE07366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400598.1;locus_tag=C9F07_07455;product=non-LEE encoded effector protein NleB;protein_id=TGE07366.1;transl_table=11 PYKI01000822.1 Genbank pseudogene 3355 3565 . + . ID=gene-C9F07_07460;Name=C9F07_07460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07460;pseudo=true PYKI01000822.1 Protein Homology CDS 3355 3565 . + 0 ID=cds-C9F07_07460;Parent=gene-C9F07_07460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675252.1;locus_tag=C9F07_07460;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000822.1 Genbank pseudogene 3689 3903 . + . ID=gene-C9F07_07465;Name=C9F07_07465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07465;pseudo=true PYKI01000822.1 Protein Homology CDS 3689 3903 . + 0 ID=cds-C9F07_07465;Parent=gene-C9F07_07465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463027.1;locus_tag=C9F07_07465;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000822.1 Genbank pseudogene 3998 4168 . - . ID=gene-C9F07_07470;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=pseudogene;locus_tag=C9F07_07470;pseudo=true PYKI01000822.1 Protein Homology CDS 3998 4168 . - 0 ID=cds-C9F07_07470;Parent=gene-C9F07_07470;Note=in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=thiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457915.1;locus_tag=C9F07_07470;product=2-iminoacetate synthase ThiH;pseudo=true;transl_table=11 ##sequence-region PYKI01001255.1 1 1375 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001255.1 Genbank region 1 1375 . + . ID=PYKI01001255.1:1..1375;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001255.1 Genbank gene 1 276 . + . ID=gene-C9F07_11710;Name=C9F07_11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11710;partial=true;start_range=.,1 PYKI01001255.1 Protein Homology CDS 1 276 . + 0 ID=cds-TGD89543.1;Parent=gene-C9F07_11710;Dbxref=NCBI_GP:TGD89543.1;Name=TGD89543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=C9F07_11710;partial=true;product=DUF4751 domain-containing protein;protein_id=TGD89543.1;start_range=.,1;transl_table=11 PYKI01001255.1 Genbank gene 282 977 . - . ID=gene-C9F07_11715;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=C9F07_11715 PYKI01001255.1 Protein Homology CDS 282 977 . - 0 ID=cds-TGD89544.1;Parent=gene-C9F07_11715;Dbxref=NCBI_GP:TGD89544.1;Name=TGD89544.1;gbkey=CDS;gene=araD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124519.1;locus_tag=C9F07_11715;product=L-ribulose-5-phosphate 4-epimerase;protein_id=TGD89544.1;transl_table=11 PYKI01001255.1 Genbank gene 1118 1375 . - . ID=gene-C9F07_11720;Name=C9F07_11720;end_range=1375,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11720;partial=true PYKI01001255.1 Protein Homology CDS 1118 1375 . - 0 ID=cds-TGD89545.1;Parent=gene-C9F07_11720;Dbxref=NCBI_GP:TGD89545.1;Name=TGD89545.1;Note=catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism;end_range=1375,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454714.1;locus_tag=C9F07_11720;partial=true;product=L-arabinose isomerase;protein_id=TGD89545.1;transl_table=11 ##sequence-region PYKI01002159.1 1 1375 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002159.1 Genbank region 1 1375 . + . ID=PYKI01002159.1:1..1375;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002159.1 Genbank pseudogene 52 1122 . + . ID=gene-C9F07_20975;Name=alr;gbkey=Gene;gene=alr;gene_biotype=pseudogene;locus_tag=C9F07_20975;pseudo=true PYKI01002159.1 Protein Homology CDS 52 1122 . + 0 ID=cds-C9F07_20975;Parent=gene-C9F07_20975;Note=internal stop;gbkey=CDS;gene=alr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=C9F07_20975;product=alanine racemase;pseudo=true;transl_table=11 PYKI01002159.1 Genbank gene 1185 1375 . - . ID=gene-C9F07_20980;Name=C9F07_20980;end_range=1375,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20980;partial=true PYKI01002159.1 Protein Homology CDS 1185 1375 . - 2 ID=cds-TGD57230.1;Parent=gene-C9F07_20980;Dbxref=NCBI_GP:TGD57230.1;Name=TGD57230.1;end_range=1375,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456308.1;locus_tag=C9F07_20980;partial=true;product=hypothetical protein;protein_id=TGD57230.1;transl_table=11 ##sequence-region PYKI01003378.1 1 1374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003378.1 Genbank region 1 1374 . + . ID=PYKI01003378.1:1..1374;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003378.1 Genbank gene 1 367 . - . ID=gene-C9F07_34020;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=C9F07_34020;partial=true;start_range=.,1 PYKI01003378.1 Protein Homology CDS 1 367 . - 0 ID=cds-TGD34427.1;Parent=gene-C9F07_34020;Dbxref=NCBI_GP:TGD34427.1;Name=TGD34427.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456937.1;locus_tag=C9F07_34020;partial=true;product=omptin family outer membrane protease PgtE;protein_id=TGD34427.1;start_range=.,1;transl_table=11 PYKI01003378.1 Genbank pseudogene 635 1374 . - . ID=gene-C9F07_34025;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=pseudogene;locus_tag=C9F07_34025;pseudo=true PYKI01003378.1 Protein Homology CDS 635 1374 . - 2 ID=cds-C9F07_34025;Parent=gene-C9F07_34025;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=pgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=C9F07_34025;product=two-component system response regulator PgtA;pseudo=true;transl_table=11 ##sequence-region PYKI01000915.1 1 1372 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000915.1 Genbank region 1 1372 . + . ID=PYKI01000915.1:1..1372;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000915.1 Genbank gene 1 1353 . - . ID=gene-C9F07_08335;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=C9F07_08335;partial=true;start_range=.,1 PYKI01000915.1 Protein Homology CDS 1 1353 . - 0 ID=cds-TGE03010.1;Parent=gene-C9F07_08335;Dbxref=NCBI_GP:TGE03010.1;Name=TGE03010.1;gbkey=CDS;gene=tamA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686357.1;locus_tag=C9F07_08335;partial=true;product=autotransporter assembly complex protein TamA;protein_id=TGE03010.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001212.1 1 1372 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001212.1 Genbank region 1 1372 . + . ID=PYKI01001212.1:1..1372;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001212.1 Genbank gene 1 631 . + . ID=gene-C9F07_11350;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=C9F07_11350;partial=true;start_range=.,1 PYKI01001212.1 Protein Homology CDS 1 631 . + 1 ID=cds-TGD91341.1;Parent=gene-C9F07_11350;Dbxref=NCBI_GP:TGD91341.1;Name=TGD91341.1;Note=cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake;gbkey=CDS;gene=feoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=C9F07_11350;partial=true;product=ferrous iron transport protein B;protein_id=TGD91341.1;start_range=.,1;transl_table=11 PYKI01001212.1 Genbank gene 644 880 . + . ID=gene-C9F07_11355;Name=C9F07_11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11355 PYKI01001212.1 Protein Homology CDS 644 880 . + 0 ID=cds-TGD91342.1;Parent=gene-C9F07_11355;Dbxref=NCBI_GP:TGD91342.1;Name=TGD91342.1;Note=regulatory protein that controls transcription of feoABC genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458397.1;locus_tag=C9F07_11355;product=ferrous iron transporter C;protein_id=TGD91342.1;transl_table=11 PYKI01001212.1 Genbank pseudogene 1115 1312 . + . ID=gene-C9F07_11360;Name=C9F07_11360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11360;pseudo=true PYKI01001212.1 Protein Homology CDS 1115 1312 . + 0 ID=cds-C9F07_11360;Parent=gene-C9F07_11360;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458396.1;locus_tag=C9F07_11360;product=ISNCY family transposase;pseudo=true;transl_table=11 ##sequence-region PYKI01003180.1 1 1372 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003180.1 Genbank region 1 1372 . + . ID=PYKI01003180.1:1..1372;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003180.1 Genbank gene 1 395 . - . ID=gene-C9F07_31910;Name=C9F07_31910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31910;partial=true;start_range=.,1 PYKI01003180.1 Protein Homology CDS 1 395 . - 0 ID=cds-TGD37669.1;Parent=gene-C9F07_31910;Dbxref=NCBI_GP:TGD37669.1;Name=TGD37669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457902.1;locus_tag=C9F07_31910;partial=true;product=zinc resistance-associated protein ZraP;protein_id=TGD37669.1;start_range=.,1;transl_table=11 PYKI01003180.1 Genbank gene 649 1372 . + . ID=gene-C9F07_31915;Name=zraS;end_range=1372,.;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=C9F07_31915;partial=true PYKI01003180.1 Protein Homology CDS 649 1372 . + 0 ID=cds-TGD37670.1;Parent=gene-C9F07_31915;Dbxref=NCBI_GP:TGD37670.1;Name=TGD37670.1;end_range=1372,.;gbkey=CDS;gene=zraS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=C9F07_31915;partial=true;product=two-component system sensor histidine kinase ZraS;protein_id=TGD37670.1;transl_table=11 ##sequence-region PYKI01000883.1 1 1372 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000883.1 Genbank region 1 1372 . + . ID=PYKI01000883.1:1..1372;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000883.1 Genbank gene 25 1263 . - . ID=gene-C9F07_08090;Name=C9F07_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08090 PYKI01000883.1 Protein Homology CDS 25 1263 . - 0 ID=cds-TGE04338.1;Parent=gene-C9F07_08090;Dbxref=NCBI_GP:TGE04338.1;Name=TGE04338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=C9F07_08090;product=alanine transaminase;protein_id=TGE04338.1;transl_table=11 ##sequence-region PYKI01000390.1 1 1371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000390.1 Genbank region 1 1371 . + . ID=PYKI01000390.1:1..1371;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000390.1 Genbank gene 506 820 . - . ID=gene-C9F07_02950;Name=C9F07_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02950 PYKI01000390.1 Protein Homology CDS 506 820 . - 0 ID=cds-TGE22780.1;Parent=gene-C9F07_02950;Dbxref=NCBI_GP:TGE22780.1;Name=TGE22780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=C9F07_02950;product=hypothetical protein;protein_id=TGE22780.1;transl_table=11 PYKI01000390.1 Genbank gene 1087 1371 . - . ID=gene-C9F07_02955;Name=C9F07_02955;end_range=1371,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02955;partial=true PYKI01000390.1 Protein Homology CDS 1087 1371 . - 0 ID=cds-TGE22781.1;Parent=gene-C9F07_02955;Dbxref=NCBI_GP:TGE22781.1;Name=TGE22781.1;end_range=1371,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=C9F07_02955;partial=true;product=two-component system response regulator ArcA;protein_id=TGE22781.1;transl_table=11 ##sequence-region PYKI01000589.1 1 4196 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000589.1 Genbank region 1 4196 . + . ID=PYKI01000589.1:1..4196;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000589.1 Genbank gene 100 984 . + . ID=gene-C9F07_05000;Name=C9F07_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05000 PYKI01000589.1 Protein Homology CDS 100 984 . + 0 ID=cds-TGE14239.1;Parent=gene-C9F07_05000;Dbxref=NCBI_GP:TGE14239.1;Name=TGE14239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000549737.1;locus_tag=C9F07_05000;product=EamA family transporter;protein_id=TGE14239.1;transl_table=11 PYKI01000589.1 Genbank gene 1117 1275 . + . ID=gene-C9F07_05005;Name=C9F07_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05005 PYKI01000589.1 Protein Homology CDS 1117 1275 . + 0 ID=cds-TGE14240.1;Parent=gene-C9F07_05005;Dbxref=NCBI_GP:TGE14240.1;Name=TGE14240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456366.1;locus_tag=C9F07_05005;product=hypothetical protein;protein_id=TGE14240.1;transl_table=11 PYKI01000589.1 Genbank gene 1285 1899 . + . ID=gene-C9F07_05010;Name=C9F07_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05010 PYKI01000589.1 Protein Homology CDS 1285 1899 . + 0 ID=cds-TGE14241.1;Parent=gene-C9F07_05010;Dbxref=NCBI_GP:TGE14241.1;Name=TGE14241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460820.1;locus_tag=C9F07_05010;product=disulfide bond formation protein B;protein_id=TGE14241.1;transl_table=11 PYKI01000589.1 Genbank pseudogene 2226 2466 . - . ID=gene-C9F07_05015;Name=C9F07_05015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05015;pseudo=true PYKI01000589.1 Protein Homology CDS 2226 2466 . - 0 ID=cds-C9F07_05015;Parent=gene-C9F07_05015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682430.1;locus_tag=C9F07_05015;product=Hin recombinase;pseudo=true;transl_table=11 PYKI01000589.1 Genbank gene 2652 2918 . - . ID=gene-C9F07_05020;Name=C9F07_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05020 PYKI01000589.1 Protein Homology CDS 2652 2918 . - 0 ID=cds-TGE14242.1;Parent=gene-C9F07_05020;Dbxref=NCBI_GP:TGE14242.1;Name=TGE14242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001668484.1;locus_tag=C9F07_05020;product=hypothetical protein;protein_id=TGE14242.1;transl_table=11 PYKI01000589.1 Genbank gene 3047 3172 . - . ID=gene-C9F07_05025;Name=C9F07_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05025 PYKI01000589.1 Protein Homology CDS 3047 3172 . - 0 ID=cds-TGE14243.1;Parent=gene-C9F07_05025;Dbxref=NCBI_GP:TGE14243.1;Name=TGE14243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457876.1;locus_tag=C9F07_05025;product=arsenic transporter;protein_id=TGE14243.1;transl_table=11 PYKI01000589.1 Genbank gene 3435 3551 . + . ID=gene-C9F07_05030;Name=C9F07_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05030 PYKI01000589.1 Protein Homology CDS 3435 3551 . + 0 ID=cds-TGE14244.1;Parent=gene-C9F07_05030;Dbxref=NCBI_GP:TGE14244.1;Name=TGE14244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525008.1;locus_tag=C9F07_05030;product=phage tail protein;protein_id=TGE14244.1;transl_table=11 PYKI01000589.1 Genbank gene 3742 3942 . + . ID=gene-C9F07_05035;Name=C9F07_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05035 PYKI01000589.1 Protein Homology CDS 3742 3942 . + 0 ID=cds-TGE14245.1;Parent=gene-C9F07_05035;Dbxref=NCBI_GP:TGE14245.1;Name=TGE14245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460822.1;locus_tag=C9F07_05035;product=phage virulence factor;protein_id=TGE14245.1;transl_table=11 PYKI01000589.1 Genbank gene 4039 4196 . - . ID=gene-C9F07_05040;Name=C9F07_05040;end_range=4196,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05040;partial=true PYKI01000589.1 Protein Homology CDS 4039 4196 . - 2 ID=cds-TGE14246.1;Parent=gene-C9F07_05040;Dbxref=NCBI_GP:TGE14246.1;Name=TGE14246.1;end_range=4196,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460823.1;locus_tag=C9F07_05040;partial=true;product=phage tail protein;protein_id=TGE14246.1;transl_table=11 ##sequence-region PYKI01002443.1 1 1368 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002443.1 Genbank region 1 1368 . + . ID=PYKI01002443.1:1..1368;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002443.1 Genbank gene 56 367 . + . ID=gene-C9F07_24140;Name=C9F07_24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24140 PYKI01002443.1 Protein Homology CDS 56 367 . + 0 ID=cds-TGD51028.1;Parent=gene-C9F07_24140;Dbxref=NCBI_GP:TGD51028.1;Name=TGD51028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384372.1;locus_tag=C9F07_24140;product=hypothetical protein;protein_id=TGD51028.1;transl_table=11 PYKI01002443.1 Genbank gene 377 715 . + . ID=gene-C9F07_24145;Name=C9F07_24145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24145 PYKI01002443.1 Protein Homology CDS 377 715 . + 0 ID=cds-TGD51025.1;Parent=gene-C9F07_24145;Dbxref=NCBI_GP:TGD51025.1;Name=TGD51025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240216.1;locus_tag=C9F07_24145;product=head-tail adaptor protein;protein_id=TGD51025.1;transl_table=11 PYKI01002443.1 Genbank gene 712 1161 . + . ID=gene-C9F07_24150;Name=C9F07_24150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24150 PYKI01002443.1 Protein Homology CDS 712 1161 . + 0 ID=cds-TGD51026.1;Parent=gene-C9F07_24150;Dbxref=NCBI_GP:TGD51026.1;Name=TGD51026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000573485.1;locus_tag=C9F07_24150;product=hypothetical protein;protein_id=TGD51026.1;transl_table=11 PYKI01002443.1 Genbank gene 1158 1368 . + . ID=gene-C9F07_24155;Name=C9F07_24155;end_range=1368,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24155;partial=true PYKI01002443.1 Protein Homology CDS 1158 1368 . + 0 ID=cds-TGD51027.1;Parent=gene-C9F07_24155;Dbxref=NCBI_GP:TGD51027.1;Name=TGD51027.1;end_range=1368,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001648721.1;locus_tag=C9F07_24155;partial=true;product=hypothetical protein;protein_id=TGD51027.1;transl_table=11 ##sequence-region PYKI01001627.1 1 1366 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001627.1 Genbank region 1 1366 . + . ID=PYKI01001627.1:1..1366;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001627.1 Genbank gene 120 1118 . - . ID=gene-C9F07_15530;Name=C9F07_15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15530 PYKI01001627.1 Protein Homology CDS 120 1118 . - 0 ID=cds-TGD70562.1;Parent=gene-C9F07_15530;Dbxref=NCBI_GP:TGD70562.1;Name=TGD70562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=C9F07_15530;product=L-glyceraldehyde 3-phosphate reductase;protein_id=TGD70562.1;transl_table=11 PYKI01001627.1 Genbank gene 1115 1363 . - . ID=gene-C9F07_15535;Name=C9F07_15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15535 PYKI01001627.1 Protein Homology CDS 1115 1363 . - 0 ID=cds-TGD70563.1;Parent=gene-C9F07_15535;Dbxref=NCBI_GP:TGD70563.1;Name=TGD70563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521556.1;locus_tag=C9F07_15535;product=hypothetical protein;protein_id=TGD70563.1;transl_table=11 ##sequence-region PYKI01001129.1 1 1364 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001129.1 Genbank region 1 1364 . + . ID=PYKI01001129.1:1..1364;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001129.1 Genbank gene 1 522 . + . ID=gene-C9F07_10525;Name=C9F07_10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10525;partial=true;start_range=.,1 PYKI01001129.1 Protein Homology CDS 1 522 . + 0 ID=cds-TGD94752.1;Parent=gene-C9F07_10525;Dbxref=NCBI_GP:TGD94752.1;Name=TGD94752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=C9F07_10525;partial=true;product=imidazolonepropionase;protein_id=TGD94752.1;start_range=.,1;transl_table=11 PYKI01001129.1 Genbank gene 519 1364 . + . ID=gene-C9F07_10530;Name=C9F07_10530;end_range=1364,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10530;partial=true PYKI01001129.1 Protein Homology CDS 519 1364 . + 0 ID=cds-TGD94753.1;Parent=gene-C9F07_10530;Dbxref=NCBI_GP:TGD94753.1;Name=TGD94753.1;end_range=1364,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=C9F07_10530;partial=true;product=formimidoylglutamase;protein_id=TGD94753.1;transl_table=11 ##sequence-region PYKI01002251.1 1 1363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002251.1 Genbank region 1 1363 . + . ID=PYKI01002251.1:1..1363;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002251.1 Genbank gene 1 609 . + . ID=gene-C9F07_22000;Name=C9F07_22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22000;partial=true;start_range=.,1 PYKI01002251.1 Protein Homology CDS 1 609 . + 0 ID=cds-TGD55744.1;Parent=gene-C9F07_22000;Dbxref=NCBI_GP:TGD55744.1;Name=TGD55744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460751.1;locus_tag=C9F07_22000;partial=true;product=glutamate dehydrogenase;protein_id=TGD55744.1;start_range=.,1;transl_table=11 PYKI01002251.1 Genbank pseudogene 823 1278 . + . ID=gene-C9F07_22005;Name=C9F07_22005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22005;pseudo=true PYKI01002251.1 Protein Homology CDS 823 1278 . + 0 ID=cds-C9F07_22005;Parent=gene-C9F07_22005;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=C9F07_22005;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002983.1 1 1362 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002983.1 Genbank region 1 1362 . + . ID=PYKI01002983.1:1..1362;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002983.1 Genbank gene 1 496 . - . ID=gene-C9F07_29910;Name=C9F07_29910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29910;partial=true;start_range=.,1 PYKI01002983.1 Protein Homology CDS 1 496 . - 0 ID=cds-TGD41449.1;Parent=gene-C9F07_29910;Dbxref=NCBI_GP:TGD41449.1;Name=TGD41449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=C9F07_29910;partial=true;product=GMP synthase (glutamine-hydrolyzing);protein_id=TGD41449.1;start_range=.,1;transl_table=11 PYKI01002983.1 Genbank gene 565 1362 . - . ID=gene-C9F07_29915;Name=C9F07_29915;end_range=1362,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29915;partial=true PYKI01002983.1 Protein Homology CDS 565 1362 . - 0 ID=cds-TGD41450.1;Parent=gene-C9F07_29915;Dbxref=NCBI_GP:TGD41450.1;Name=TGD41450.1;end_range=1362,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457045.1;locus_tag=C9F07_29915;partial=true;product=hypothetical protein;protein_id=TGD41450.1;transl_table=11 ##sequence-region PYKI01002598.1 1 1361 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002598.1 Genbank region 1 1361 . + . ID=PYKI01002598.1:1..1361;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002598.1 Genbank gene 1 385 . - . ID=gene-C9F07_25790;Name=C9F07_25790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25790;partial=true;start_range=.,1 PYKI01002598.1 Protein Homology CDS 1 385 . - 0 ID=cds-TGD49638.1;Parent=gene-C9F07_25790;Dbxref=NCBI_GP:TGD49638.1;Name=TGD49638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456454.1;locus_tag=C9F07_25790;partial=true;product=RpiR family transcriptional regulator;protein_id=TGD49638.1;start_range=.,1;transl_table=11 PYKI01002598.1 Genbank gene 569 754 . - . ID=gene-C9F07_25795;Name=C9F07_25795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25795 PYKI01002598.1 Protein Homology CDS 569 754 . - 0 ID=cds-TGD49639.1;Parent=gene-C9F07_25795;Dbxref=NCBI_GP:TGD49639.1;Name=TGD49639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540243.1;locus_tag=C9F07_25795;product=hypothetical protein;protein_id=TGD49639.1;transl_table=11 PYKI01002598.1 Genbank gene 727 1361 . + . ID=gene-C9F07_25800;Name=C9F07_25800;end_range=1361,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25800;partial=true PYKI01002598.1 Protein Homology CDS 727 1361 . + 0 ID=cds-TGD49640.1;Parent=gene-C9F07_25800;Dbxref=NCBI_GP:TGD49640.1;Name=TGD49640.1;end_range=1361,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=C9F07_25800;partial=true;product=glucose-6-phosphate 1-dehydrogenase;protein_id=TGD49640.1;transl_table=11 ##sequence-region PYKI01000938.1 1 1360 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000938.1 Genbank region 1 1360 . + . ID=PYKI01000938.1:1..1360;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000938.1 Genbank gene 1 382 . - . ID=gene-C9F07_08550;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=C9F07_08550;partial=true;start_range=.,1 PYKI01000938.1 Protein Homology CDS 1 382 . - 0 ID=cds-TGE02116.1;Parent=gene-C9F07_08550;Dbxref=NCBI_GP:TGE02116.1;Name=TGE02116.1;gbkey=CDS;gene=napF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=C9F07_08550;partial=true;product=ferredoxin-type protein NapF;protein_id=TGE02116.1;start_range=.,1;transl_table=11 PYKI01000938.1 Genbank gene 796 1290 . + . ID=gene-C9F07_08555;Name=C9F07_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08555 PYKI01000938.1 Protein Homology CDS 796 1290 . + 0 ID=cds-TGE02117.1;Parent=gene-C9F07_08555;Dbxref=NCBI_GP:TGE02117.1;Name=TGE02117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=C9F07_08555;product=ecotin;protein_id=TGE02117.1;transl_table=11 ##sequence-region PYKI01002256.1 1 1359 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002256.1 Genbank region 1 1359 . + . ID=PYKI01002256.1:1..1359;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002256.1 Genbank gene 1 466 . + . ID=gene-C9F07_22085;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=C9F07_22085;partial=true;start_range=.,1 PYKI01002256.1 Protein Homology CDS 1 466 . + 1 ID=cds-TGD55556.1;Parent=gene-C9F07_22085;Dbxref=NCBI_GP:TGD55556.1;Name=TGD55556.1;gbkey=CDS;gene=rarD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339083.1;locus_tag=C9F07_22085;partial=true;product=EamA family transporter RarD;protein_id=TGD55556.1;start_range=.,1;transl_table=11 PYKI01002256.1 Genbank gene 540 1359 . - . ID=gene-C9F07_22090;Name=C9F07_22090;end_range=1359,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22090;partial=true PYKI01002256.1 Protein Homology CDS 540 1359 . - 1 ID=cds-TGD55557.1;Parent=gene-C9F07_22090;Dbxref=NCBI_GP:TGD55557.1;Name=TGD55557.1;Note=responsible for the influx of magnesium ions;end_range=1359,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=C9F07_22090;partial=true;product=magnesium transporter CorA;protein_id=TGD55557.1;transl_table=11 ##sequence-region PYKI01002680.1 1 1359 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002680.1 Genbank region 1 1359 . + . ID=PYKI01002680.1:1..1359;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002680.1 Genbank gene 1 756 . + . ID=gene-C9F07_26700;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=C9F07_26700;partial=true;start_range=.,1 PYKI01002680.1 Protein Homology CDS 1 756 . + 0 ID=cds-TGD48668.1;Parent=gene-C9F07_26700;Dbxref=NCBI_GP:TGD48668.1;Name=TGD48668.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;gbkey=CDS;gene=pheT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012905611.1;locus_tag=C9F07_26700;partial=true;product=phenylalanine--tRNA ligase subunit beta;protein_id=TGD48668.1;start_range=.,1;transl_table=11 PYKI01002680.1 Genbank gene 761 1060 . + . ID=gene-C9F07_26705;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=C9F07_26705 PYKI01002680.1 Protein Homology CDS 761 1060 . + 0 ID=cds-TGD48669.1;Parent=gene-C9F07_26705;Dbxref=NCBI_GP:TGD48669.1;Name=TGD48669.1;gbkey=CDS;gene=ihfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456172.1;locus_tag=C9F07_26705;product=integration host factor subunit alpha;protein_id=TGD48669.1;transl_table=11 PYKI01002680.1 Genbank gene 1263 1359 . + . ID=gene-C9F07_26710;Name=C9F07_26710;end_range=1359,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26710;partial=true PYKI01002680.1 Protein Homology CDS 1263 1359 . + 0 ID=cds-TGD48670.1;Parent=gene-C9F07_26710;Dbxref=NCBI_GP:TGD48670.1;Name=TGD48670.1;end_range=1359,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456171.1;locus_tag=C9F07_26710;partial=true;product=vtamin B12-transporter permease;protein_id=TGD48670.1;transl_table=11 ##sequence-region PYKI01001863.1 1 4184 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001863.1 Genbank region 1 4184 . + . ID=PYKI01001863.1:1..4184;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001863.1 Genbank gene 2 77 . + . ID=gene-C9F07_17905;Name=C9F07_17905;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_17905 PYKI01001863.1 tRNAscan-SE tRNA 2 77 . + . ID=rna-C9F07_17905;Parent=gene-C9F07_17905;anticodon=(pos:35..37);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_17905;product=tRNA-Asn PYKI01001863.1 tRNAscan-SE exon 2 77 . + . ID=exon-C9F07_17905-1;Parent=rna-C9F07_17905;anticodon=(pos:35..37);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_17905;product=tRNA-Asn PYKI01001863.1 Genbank pseudogene 82 383 . - . ID=gene-C9F07_17910;Name=C9F07_17910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17910;pseudo=true PYKI01001863.1 Protein Homology CDS 82 383 . - 0 ID=cds-C9F07_17910;Parent=gene-C9F07_17910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000665563.1;locus_tag=C9F07_17910;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001863.1 Genbank pseudogene 499 964 . + . ID=gene-C9F07_17915;Name=C9F07_17915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17915;pseudo=true PYKI01001863.1 Protein Homology CDS 499 964 . + 0 ID=cds-C9F07_17915;Parent=gene-C9F07_17915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002346786.1;locus_tag=C9F07_17915;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001863.1 Genbank pseudogene 958 1284 . + . ID=gene-C9F07_17920;Name=C9F07_17920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17920;pseudo=true PYKI01001863.1 Protein Homology CDS 958 1284 . + 0 ID=cds-C9F07_17920;Parent=gene-C9F07_17920;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456564.1;locus_tag=C9F07_17920;product=acyl carrier protein;pseudo=true;transl_table=11 PYKI01001863.1 Genbank gene 1273 1434 . - . ID=gene-C9F07_17925;Name=C9F07_17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17925 PYKI01001863.1 Protein Homology CDS 1273 1434 . - 0 ID=cds-TGD62969.1;Parent=gene-C9F07_17925;Dbxref=NCBI_GP:TGD62969.1;Name=TGD62969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=C9F07_17925;product=cytoplasmic protein;protein_id=TGD62969.1;transl_table=11 PYKI01001863.1 Genbank gene 1480 2934 . + . ID=gene-C9F07_17930;Name=C9F07_17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17930 PYKI01001863.1 Protein Homology CDS 1480 2934 . + 0 ID=cds-TGD62970.1;Parent=gene-C9F07_17930;Dbxref=NCBI_GP:TGD62970.1;Name=TGD62970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=C9F07_17930;product=AMP nucleosidase;protein_id=TGD62970.1;transl_table=11 PYKI01001863.1 Genbank pseudogene 3034 3301 . + . ID=gene-C9F07_17935;Name=C9F07_17935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17935;pseudo=true PYKI01001863.1 Protein Homology CDS 3034 3301 . + 0 ID=cds-C9F07_17935;Parent=gene-C9F07_17935;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991988.1;locus_tag=C9F07_17935;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001863.1 Genbank gene 3436 3511 . - . ID=gene-C9F07_17940;Name=C9F07_17940;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_17940 PYKI01001863.1 tRNAscan-SE tRNA 3436 3511 . - . ID=rna-C9F07_17940;Parent=gene-C9F07_17940;anticodon=(pos:complement(3476..3478));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_17940;product=tRNA-Asn PYKI01001863.1 tRNAscan-SE exon 3436 3511 . - . ID=exon-C9F07_17940-1;Parent=rna-C9F07_17940;anticodon=(pos:complement(3476..3478));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_17940;product=tRNA-Asn PYKI01001863.1 Genbank pseudogene 3680 3944 . - . ID=gene-C9F07_17945;Name=C9F07_17945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17945;pseudo=true PYKI01001863.1 Protein Homology CDS 3680 3944 . - 0 ID=cds-C9F07_17945;Parent=gene-C9F07_17945;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006743378.1;locus_tag=C9F07_17945;product=recombinase;pseudo=true;transl_table=11 PYKI01001863.1 Genbank gene 4112 4184 . - . ID=gene-C9F07_17950;Name=C9F07_17950;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_17950 PYKI01001863.1 tRNAscan-SE tRNA 4112 4184 . - . ID=rna-C9F07_17950;Parent=gene-C9F07_17950;anticodon=(pos:complement(4152..4154));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_17950;product=tRNA-Asn PYKI01001863.1 tRNAscan-SE exon 4112 4184 . - . ID=exon-C9F07_17950-1;Parent=rna-C9F07_17950;anticodon=(pos:complement(4152..4154));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_17950;product=tRNA-Asn ##sequence-region PYKI01001011.1 1 1357 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001011.1 Genbank region 1 1357 . + . ID=PYKI01001011.1:1..1357;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001011.1 Genbank gene 1 1357 . - . ID=gene-C9F07_09275;Name=dnaE;end_range=1357,.;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=C9F07_09275;partial=true;start_range=.,1 PYKI01001011.1 Protein Homology CDS 1 1357 . - 2 ID=cds-TGD97849.1;Parent=gene-C9F07_09275;Dbxref=NCBI_GP:TGD97849.1;Name=TGD97849.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;end_range=1357,.;gbkey=CDS;gene=dnaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454838.1;locus_tag=C9F07_09275;partial=true;product=DNA polymerase III subunit alpha;protein_id=TGD97849.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001585.1 1 1356 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001585.1 Genbank region 1 1356 . + . ID=PYKI01001585.1:1..1356;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001585.1 Genbank gene 1 1356 . - . ID=gene-C9F07_15155;Name=C9F07_15155;end_range=1356,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15155;partial=true;start_range=.,1 PYKI01001585.1 Protein Homology CDS 1 1356 . - 0 ID=cds-TGD72368.1;Parent=gene-C9F07_15155;Dbxref=NCBI_GP:TGD72368.1;Name=TGD72368.1;end_range=1356,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460251.1;locus_tag=C9F07_15155;partial=true;product=PrkA family serine protein kinase;protein_id=TGD72368.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001493.1 1 1355 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001493.1 Genbank region 1 1355 . + . ID=PYKI01001493.1:1..1355;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001493.1 Genbank pseudogene 45 473 . + . ID=gene-C9F07_14210;Name=C9F07_14210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14210;pseudo=true PYKI01001493.1 Protein Homology CDS 45 473 . + 0 ID=cds-C9F07_14210;Parent=gene-C9F07_14210;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457726.1;locus_tag=C9F07_14210;product=outer membrane-stress sensor serine endopeptidase DegS;pseudo=true;transl_table=11 PYKI01001493.1 Genbank gene 507 1205 . - . ID=gene-C9F07_14215;Name=C9F07_14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14215 PYKI01001493.1 Protein Homology CDS 507 1205 . - 0 ID=cds-TGD78716.1;Parent=gene-C9F07_14215;Dbxref=NCBI_GP:TGD78716.1;Name=TGD78716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991998.1;locus_tag=C9F07_14215;product=hypothetical protein;protein_id=TGD78716.1;transl_table=11 ##sequence-region PYKI01003496.1 1 1355 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003496.1 Genbank region 1 1355 . + . ID=PYKI01003496.1:1..1355;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003496.1 Genbank pseudogene 45 824 . + . ID=gene-C9F07_35185;Name=C9F07_35185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35185;pseudo=true PYKI01003496.1 Protein Homology CDS 45 824 . + 0 ID=cds-C9F07_35185;Parent=gene-C9F07_35185;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458101.1;locus_tag=C9F07_35185;product=membrane protein insertase YidC;pseudo=true;transl_table=11 PYKI01003496.1 Genbank gene 966 1355 . + . ID=gene-C9F07_35190;Name=trmE;end_range=1355,.;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=C9F07_35190;partial=true PYKI01003496.1 Protein Homology CDS 966 1355 . + 0 ID=cds-TGD32165.1;Parent=gene-C9F07_35190;Dbxref=NCBI_GP:TGD32165.1;Name=TGD32165.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;end_range=1355,.;gbkey=CDS;gene=trmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458100.1;locus_tag=C9F07_35190;partial=true;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=TGD32165.1;transl_table=11 ##sequence-region PYKI01003401.1 1 1355 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003401.1 Genbank region 1 1355 . + . ID=PYKI01003401.1:1..1355;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003401.1 Genbank pseudogene 1 947 . + . ID=gene-C9F07_34185;Name=C9F07_34185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34185;pseudo=true PYKI01003401.1 Protein Homology CDS 1 947 . + 2 ID=cds-C9F07_34185;Parent=gene-C9F07_34185;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=C9F07_34185;product=glycogen debranching enzyme GlgX;pseudo=true;transl_table=11 PYKI01003401.1 Genbank gene 1060 1355 . - . ID=gene-C9F07_34190;Name=C9F07_34190;end_range=1355,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34190;partial=true PYKI01003401.1 Protein Homology CDS 1060 1355 . - 2 ID=cds-TGD33924.1;Parent=gene-C9F07_34190;Dbxref=NCBI_GP:TGD33924.1;Name=TGD33924.1;end_range=1355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455935.1;locus_tag=C9F07_34190;partial=true;product=aminotransferase;protein_id=TGD33924.1;transl_table=11 ##sequence-region PYKI01000734.1 1 1355 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000734.1 Genbank region 1 1355 . + . ID=PYKI01000734.1:1..1355;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000734.1 Genbank pseudogene 1 1277 . - . ID=gene-C9F07_06455;Name=infB;gbkey=Gene;gene=infB;gene_biotype=pseudogene;locus_tag=C9F07_06455;pseudo=true PYKI01000734.1 Protein Homology CDS 1 1277 . - 0 ID=cds-C9F07_06455;Parent=gene-C9F07_06455;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=infB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312076.1;locus_tag=C9F07_06455;product=translation initiation factor IF-2;pseudo=true;transl_table=11 ##sequence-region PYKI01003169.1 1 1354 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003169.1 Genbank region 1 1354 . + . ID=PYKI01003169.1:1..1354;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003169.1 Genbank gene 1 863 . - . ID=gene-C9F07_31805;Name=C9F07_31805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31805;partial=true;start_range=.,1 PYKI01003169.1 Protein Homology CDS 1 863 . - 0 ID=cds-TGD37988.1;Parent=gene-C9F07_31805;Dbxref=NCBI_GP:TGD37988.1;Name=TGD37988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457119.1;locus_tag=C9F07_31805;partial=true;product=ATP-dependent RNA helicase SrmB;protein_id=TGD37988.1;start_range=.,1;transl_table=11 PYKI01003169.1 Genbank gene 993 1354 . + . ID=gene-C9F07_31810;Name=C9F07_31810;end_range=1354,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31810;partial=true PYKI01003169.1 Protein Homology CDS 993 1354 . + 0 ID=cds-TGD37989.1;Parent=gene-C9F07_31810;Dbxref=NCBI_GP:TGD37989.1;Name=TGD37989.1;end_range=1354,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=C9F07_31810;partial=true;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase;protein_id=TGD37989.1;transl_table=11 ##sequence-region PYKI01000383.1 1 1354 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000383.1 Genbank region 1 1354 . + . ID=PYKI01000383.1:1..1354;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000383.1 Genbank gene 1 1354 . - . ID=gene-C9F07_02895;Name=C9F07_02895;end_range=1354,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02895;partial=true;start_range=.,1 PYKI01000383.1 Protein Homology CDS 1 1354 . - 2 ID=cds-TGE23173.1;Parent=gene-C9F07_02895;Dbxref=NCBI_GP:TGE23173.1;Name=TGE23173.1;end_range=1354,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=C9F07_02895;partial=true;product=alkyl hydroperoxide reductase subunit F;protein_id=TGE23173.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002757.1 1 1353 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002757.1 Genbank region 1 1353 . + . ID=PYKI01002757.1:1..1353;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002757.1 Genbank gene 59 286 . + . ID=gene-C9F07_27510;Name=C9F07_27510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27510 PYKI01002757.1 Protein Homology CDS 59 286 . + 0 ID=cds-TGD46815.1;Parent=gene-C9F07_27510;Dbxref=NCBI_GP:TGD46815.1;Name=TGD46815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=C9F07_27510;product=hypothetical protein;protein_id=TGD46815.1;transl_table=11 PYKI01002757.1 Genbank gene 320 1353 . - . ID=gene-C9F07_27515;Name=C9F07_27515;end_range=1353,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27515;partial=true PYKI01002757.1 Protein Homology CDS 320 1353 . - 2 ID=cds-TGD46816.1;Parent=gene-C9F07_27515;Dbxref=NCBI_GP:TGD46816.1;Name=TGD46816.1;end_range=1353,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=C9F07_27515;partial=true;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=TGD46816.1;transl_table=11 ##sequence-region PYKI01001581.1 1 1350 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001581.1 Genbank region 1 1350 . + . ID=PYKI01001581.1:1..1350;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001581.1 Genbank gene 1 664 . + . ID=gene-C9F07_15125;Name=C9F07_15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15125;partial=true;start_range=.,1 PYKI01001581.1 Protein Homology CDS 1 664 . + 1 ID=cds-TGD72848.1;Parent=gene-C9F07_15125;Dbxref=NCBI_GP:TGD72848.1;Name=TGD72848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458707.1;locus_tag=C9F07_15125;partial=true;product=capsid protein;protein_id=TGD72848.1;start_range=.,1;transl_table=11 PYKI01001581.1 Genbank gene 668 1318 . + . ID=gene-C9F07_15130;Name=C9F07_15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15130 PYKI01001581.1 Protein Homology CDS 668 1318 . + 0 ID=cds-TGD72849.1;Parent=gene-C9F07_15130;Dbxref=NCBI_GP:TGD72849.1;Name=TGD72849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461647.1;locus_tag=C9F07_15130;product=hypothetical protein;protein_id=TGD72849.1;transl_table=11 ##sequence-region PYKI01001525.1 1 4137 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001525.1 Genbank region 1 4137 . + . ID=PYKI01001525.1:1..4137;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001525.1 Genbank gene 1 225 . - . ID=gene-C9F07_14515;Name=C9F07_14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14515;partial=true;start_range=.,1 PYKI01001525.1 Protein Homology CDS 1 225 . - 0 ID=cds-TGD76439.1;Parent=gene-C9F07_14515;Dbxref=NCBI_GP:TGD76439.1;Name=TGD76439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457300.1;locus_tag=C9F07_14515;partial=true;product=hypothetical protein;protein_id=TGD76439.1;start_range=.,1;transl_table=11 PYKI01001525.1 Genbank gene 384 905 . + . ID=gene-C9F07_14520;Name=C9F07_14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14520 PYKI01001525.1 Protein Homology CDS 384 905 . + 0 ID=cds-TGD76435.1;Parent=gene-C9F07_14520;Dbxref=NCBI_GP:TGD76435.1;Name=TGD76435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=C9F07_14520;product=cytoplasmic protein;protein_id=TGD76435.1;transl_table=11 PYKI01001525.1 Genbank gene 1077 1733 . - . ID=gene-C9F07_14525;Name=C9F07_14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14525 PYKI01001525.1 Protein Homology CDS 1077 1733 . - 0 ID=cds-TGD76436.1;Parent=gene-C9F07_14525;Dbxref=NCBI_GP:TGD76436.1;Name=TGD76436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=C9F07_14525;product=serine/threonine protein phosphatase;protein_id=TGD76436.1;transl_table=11 PYKI01001525.1 Genbank pseudogene 2068 2285 . + . ID=gene-C9F07_14530;Name=C9F07_14530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14530;pseudo=true PYKI01001525.1 Protein Homology CDS 2068 2285 . + 0 ID=cds-C9F07_14530;Parent=gene-C9F07_14530;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=C9F07_14530;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PYKI01001525.1 Genbank pseudogene 2358 2450 . - . ID=gene-C9F07_14535;Name=C9F07_14535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14535;pseudo=true PYKI01001525.1 Protein Homology CDS 2358 2450 . - 0 ID=cds-C9F07_14535;Parent=gene-C9F07_14535;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457296.1;locus_tag=C9F07_14535;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 PYKI01001525.1 Genbank gene 2500 2847 . - . ID=gene-C9F07_14540;Name=C9F07_14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14540 PYKI01001525.1 Protein Homology CDS 2500 2847 . - 0 ID=cds-TGD76437.1;Parent=gene-C9F07_14540;Dbxref=NCBI_GP:TGD76437.1;Name=TGD76437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461823.1;locus_tag=C9F07_14540;product=DUF1493 domain-containing protein;protein_id=TGD76437.1;transl_table=11 PYKI01001525.1 Genbank gene 2832 3281 . - . ID=gene-C9F07_14545;Name=C9F07_14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14545 PYKI01001525.1 Protein Homology CDS 2832 3281 . - 0 ID=cds-TGD76438.1;Parent=gene-C9F07_14545;Dbxref=NCBI_GP:TGD76438.1;Name=TGD76438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461822.1;locus_tag=C9F07_14545;product=hypothetical protein;protein_id=TGD76438.1;transl_table=11 PYKI01001525.1 Genbank gene 3713 4120 . - . ID=gene-C9F07_14550;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=C9F07_14550 PYKI01001525.1 Protein Homology CDS 3713 4120 . - 0 ID=cds-TGD76440.1;Parent=gene-C9F07_14550;Dbxref=NCBI_GP:TGD76440.1;Name=TGD76440.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519351.1;locus_tag=C9F07_14550;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=TGD76440.1;transl_table=11 ##sequence-region PYKI01001220.1 1 1349 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001220.1 Genbank region 1 1349 . + . ID=PYKI01001220.1:1..1349;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001220.1 Genbank gene 1 500 . - . ID=gene-C9F07_11420;Name=C9F07_11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11420;partial=true;start_range=.,1 PYKI01001220.1 Protein Homology CDS 1 500 . - 0 ID=cds-TGD91216.1;Parent=gene-C9F07_11420;Dbxref=NCBI_GP:TGD91216.1;Name=TGD91216.1;Note=together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455748.1;locus_tag=C9F07_11420;partial=true;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=TGD91216.1;start_range=.,1;transl_table=11 PYKI01001220.1 Genbank gene 703 1349 . - . ID=gene-C9F07_11425;Name=C9F07_11425;end_range=1349,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11425;partial=true PYKI01001220.1 Protein Homology CDS 703 1349 . - 2 ID=cds-TGD91217.1;Parent=gene-C9F07_11425;Dbxref=NCBI_GP:TGD91217.1;Name=TGD91217.1;end_range=1349,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455747.1;locus_tag=C9F07_11425;partial=true;product=two-component system response regulator RssB;protein_id=TGD91217.1;transl_table=11 ##sequence-region PYKI01002696.1 1 1349 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002696.1 Genbank region 1 1349 . + . ID=PYKI01002696.1:1..1349;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002696.1 Genbank gene 100 1349 . - . ID=gene-C9F07_26900;Name=tcuA;end_range=1349,.;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=C9F07_26900;partial=true PYKI01002696.1 Protein Homology CDS 100 1349 . - 2 ID=cds-TGD48255.1;Parent=gene-C9F07_26900;Dbxref=NCBI_GP:TGD48255.1;Name=TGD48255.1;end_range=1349,.;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455252.1;locus_tag=C9F07_26900;partial=true;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=TGD48255.1;transl_table=11 ##sequence-region PYKI01000452.1 1 1348 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000452.1 Genbank region 1 1348 . + . ID=PYKI01000452.1:1..1348;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000452.1 Genbank gene 1 285 . + . ID=gene-C9F07_03500;Name=C9F07_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03500;partial=true;start_range=.,1 PYKI01000452.1 Protein Homology CDS 1 285 . + 0 ID=cds-TGE19975.1;Parent=gene-C9F07_03500;Dbxref=NCBI_GP:TGE19975.1;Name=TGE19975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455566.1;locus_tag=C9F07_03500;partial=true;product=Lon protease family protein;protein_id=TGE19975.1;start_range=.,1;transl_table=11 PYKI01000452.1 Genbank pseudogene 354 872 . + . ID=gene-C9F07_03505;Name=C9F07_03505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03505;pseudo=true PYKI01000452.1 Protein Homology CDS 354 872 . + 0 ID=cds-C9F07_03505;Parent=gene-C9F07_03505;Note=catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455565.1;locus_tag=C9F07_03505;product=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA;pseudo=true;transl_table=11 PYKI01000452.1 Genbank gene 972 1139 . - . ID=gene-C9F07_03510;Name=C9F07_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03510 PYKI01000452.1 Protein Homology CDS 972 1139 . - 0 ID=cds-TGE19976.1;Parent=gene-C9F07_03510;Dbxref=NCBI_GP:TGE19976.1;Name=TGE19976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=C9F07_03510;product=ribosome modulation factor;protein_id=TGE19976.1;transl_table=11 ##sequence-region PYKI01000702.1 1 1347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000702.1 Genbank region 1 1347 . + . ID=PYKI01000702.1:1..1347;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000702.1 Genbank gene 1 970 . - . ID=gene-C9F07_06155;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=C9F07_06155;partial=true;start_range=.,1 PYKI01000702.1 Protein Homology CDS 1 970 . - 0 ID=cds-TGE11316.1;Parent=gene-C9F07_06155;Dbxref=NCBI_GP:TGE11316.1;Name=TGE11316.1;Note=helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457387.1;locus_tag=C9F07_06155;partial=true;product=exodeoxyribonuclease V subunit beta;protein_id=TGE11316.1;start_range=.,1;transl_table=11 PYKI01000702.1 Genbank pseudogene 963 1347 . - . ID=gene-C9F07_06160;Name=C9F07_06160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06160;pseudo=true PYKI01000702.1 Protein Homology CDS 963 1347 . - 1 ID=cds-C9F07_06160;Parent=gene-C9F07_06160;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457388.1;locus_tag=C9F07_06160;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000607.1 1 1346 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000607.1 Genbank region 1 1346 . + . ID=PYKI01000607.1:1..1346;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000607.1 Genbank gene 1 341 . - . ID=gene-C9F07_05185;Name=C9F07_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05185;partial=true;start_range=.,1 PYKI01000607.1 Protein Homology CDS 1 341 . - 0 ID=cds-TGE13962.1;Parent=gene-C9F07_05185;Dbxref=NCBI_GP:TGE13962.1;Name=TGE13962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458496.1;locus_tag=C9F07_05185;partial=true;product=DNA topoisomerase I;protein_id=TGE13962.1;start_range=.,1;transl_table=11 PYKI01000607.1 Genbank gene 368 841 . - . ID=gene-C9F07_05190;Name=C9F07_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05190 PYKI01000607.1 Protein Homology CDS 368 841 . - 0 ID=cds-TGE13961.1;Parent=gene-C9F07_05190;Dbxref=NCBI_GP:TGE13961.1;Name=TGE13961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=C9F07_05190;product=hypothetical protein;protein_id=TGE13961.1;transl_table=11 PYKI01000607.1 Genbank pseudogene 813 1286 . - . ID=gene-C9F07_05195;Name=C9F07_05195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05195;pseudo=true PYKI01000607.1 Protein Homology CDS 813 1286 . - 0 ID=cds-C9F07_05195;Parent=gene-C9F07_05195;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458494.1;locus_tag=C9F07_05195;product=DNA-protecting protein DprA;pseudo=true;transl_table=11 ##sequence-region PYKI01002418.1 1 1345 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002418.1 Genbank region 1 1345 . + . ID=PYKI01002418.1:1..1345;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002418.1 Genbank gene 1 345 . + . ID=gene-C9F07_23895;Name=C9F07_23895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23895;partial=true;start_range=.,1 PYKI01002418.1 Protein Homology CDS 1 345 . + 0 ID=cds-TGD51539.1;Parent=gene-C9F07_23895;Dbxref=NCBI_GP:TGD51539.1;Name=TGD51539.1;Note=binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456557.1;locus_tag=C9F07_23895;partial=true;product=DNA polymerase V subunit UmuD;protein_id=TGD51539.1;start_range=.,1;transl_table=11 PYKI01002418.1 Genbank gene 348 1345 . + . ID=gene-C9F07_23900;Name=C9F07_23900;end_range=1345,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23900;partial=true PYKI01002418.1 Protein Homology CDS 348 1345 . + 0 ID=cds-TGD51540.1;Parent=gene-C9F07_23900;Dbxref=NCBI_GP:TGD51540.1;Name=TGD51540.1;Note=binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization;end_range=1345,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=C9F07_23900;partial=true;product=DNA polymerase V subunit UmuC;protein_id=TGD51540.1;transl_table=11 ##sequence-region PYKI01002963.1 1 1341 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002963.1 Genbank region 1 1341 . + . ID=PYKI01002963.1:1..1341;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002963.1 Genbank gene 47 478 . + . ID=gene-C9F07_29695;Name=C9F07_29695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29695 PYKI01002963.1 Protein Homology CDS 47 478 . + 0 ID=cds-TGD41879.1;Parent=gene-C9F07_29695;Dbxref=NCBI_GP:TGD41879.1;Name=TGD41879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=C9F07_29695;product=carboxymuconolactone decarboxylase family protein;protein_id=TGD41879.1;transl_table=11 PYKI01002963.1 Genbank gene 475 651 . + . ID=gene-C9F07_29700;Name=C9F07_29700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29700 PYKI01002963.1 Protein Homology CDS 475 651 . + 0 ID=cds-TGD41880.1;Parent=gene-C9F07_29700;Dbxref=NCBI_GP:TGD41880.1;Name=TGD41880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457203.1;locus_tag=C9F07_29700;product=hypothetical protein;protein_id=TGD41880.1;transl_table=11 PYKI01002963.1 Genbank gene 750 995 . + . ID=gene-C9F07_29705;Name=C9F07_29705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29705 PYKI01002963.1 Protein Homology CDS 750 995 . + 0 ID=cds-TGD41881.1;Parent=gene-C9F07_29705;Dbxref=NCBI_GP:TGD41881.1;Name=TGD41881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=C9F07_29705;product=NrdH-redoxin;protein_id=TGD41881.1;transl_table=11 PYKI01002963.1 Genbank pseudogene 992 1341 . + . ID=gene-C9F07_29710;Name=C9F07_29710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29710;pseudo=true PYKI01002963.1 Protein Homology CDS 992 1341 . + 0 ID=cds-C9F07_29710;Parent=gene-C9F07_29710;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457205.1;locus_tag=C9F07_29710;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;pseudo=true;transl_table=11 ##sequence-region PYKI01002626.1 1 1341 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002626.1 Genbank region 1 1341 . + . ID=PYKI01002626.1:1..1341;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002626.1 Genbank gene 1 132 . - . ID=gene-C9F07_26135;Name=C9F07_26135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26135;partial=true;start_range=.,1 PYKI01002626.1 Protein Homology CDS 1 132 . - 0 ID=cds-TGD49477.1;Parent=gene-C9F07_26135;Dbxref=NCBI_GP:TGD49477.1;Name=TGD49477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455466.1;locus_tag=C9F07_26135;partial=true;product=metalloprotease;protein_id=TGD49477.1;start_range=.,1;transl_table=11 PYKI01002626.1 Genbank gene 275 1341 . - . ID=gene-C9F07_26140;Name=aroA;end_range=1341,.;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=C9F07_26140;partial=true PYKI01002626.1 Protein Homology CDS 275 1341 . - 2 ID=cds-TGD49478.1;Parent=gene-C9F07_26140;Dbxref=NCBI_GP:TGD49478.1;Name=TGD49478.1;end_range=1341,.;gbkey=CDS;gene=aroA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=C9F07_26140;partial=true;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=TGD49478.1;transl_table=11 ##sequence-region PYKI01002131.1 1 1340 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002131.1 Genbank region 1 1340 . + . ID=PYKI01002131.1:1..1340;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002131.1 Genbank gene 1 381 . + . ID=gene-C9F07_20615;Name=C9F07_20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20615;partial=true;start_range=.,1 PYKI01002131.1 Protein Homology CDS 1 381 . + 0 ID=cds-TGD57846.1;Parent=gene-C9F07_20615;Dbxref=NCBI_GP:TGD57846.1;Name=TGD57846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=C9F07_20615;partial=true;product=formate dehydrogenase;protein_id=TGD57846.1;start_range=.,1;transl_table=11 PYKI01002131.1 Genbank gene 395 1279 . + . ID=gene-C9F07_20620;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=C9F07_20620 PYKI01002131.1 Protein Homology CDS 395 1279 . + 0 ID=cds-TGD57847.1;Parent=gene-C9F07_20620;Dbxref=NCBI_GP:TGD57847.1;Name=TGD57847.1;gbkey=CDS;gene=fdxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=C9F07_20620;product=formate dehydrogenase subunit beta;protein_id=TGD57847.1;transl_table=11 PYKI01002131.1 Genbank gene 1272 1340 . + . ID=gene-C9F07_20625;Name=C9F07_20625;end_range=1340,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20625;partial=true PYKI01002131.1 Protein Homology CDS 1272 1340 . + 0 ID=cds-TGD57848.1;Parent=gene-C9F07_20625;Dbxref=NCBI_GP:TGD57848.1;Name=TGD57848.1;Note=cytochrome b556(FDO) component%3B heme containing;end_range=1340,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=C9F07_20625;partial=true;product=formate dehydrogenase cytochrome b556 subunit;protein_id=TGD57848.1;transl_table=11 ##sequence-region PYKI01000155.1 1 4114 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000155.1 Genbank region 1 4114 . + . ID=PYKI01000155.1:1..4114;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000155.1 Genbank gene 1 666 . + . ID=gene-C9F07_01035;Name=C9F07_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01035;partial=true;start_range=.,1 PYKI01000155.1 Protein Homology CDS 1 666 . + 0 ID=cds-TGE30068.1;Parent=gene-C9F07_01035;Dbxref=NCBI_GP:TGE30068.1;Name=TGE30068.1;Note=Converts isocitrate to alpha ketoglutarate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=C9F07_01035;partial=true;product=NADP-dependent isocitrate dehydrogenase;protein_id=TGE30068.1;start_range=.,1;transl_table=11 PYKI01000155.1 Genbank gene 816 1922 . - . ID=gene-C9F07_01040;Name=C9F07_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01040 PYKI01000155.1 Protein Homology CDS 816 1922 . - 0 ID=cds-TGE30069.1;Parent=gene-C9F07_01040;Dbxref=NCBI_GP:TGE30069.1;Name=TGE30069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002412130.1;locus_tag=C9F07_01040;product=integrase;protein_id=TGE30069.1;transl_table=11 PYKI01000155.1 Genbank gene 1912 2148 . - . ID=gene-C9F07_01045;Name=C9F07_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01045 PYKI01000155.1 Protein Homology CDS 1912 2148 . - 0 ID=cds-TGE30070.1;Parent=gene-C9F07_01045;Dbxref=NCBI_GP:TGE30070.1;Name=TGE30070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309637.1;locus_tag=C9F07_01045;product=excisionase;protein_id=TGE30070.1;transl_table=11 PYKI01000155.1 Genbank pseudogene 2198 2590 . - . ID=gene-C9F07_01050;Name=C9F07_01050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01050;pseudo=true PYKI01000155.1 Protein Homology CDS 2198 2590 . - 0 ID=cds-C9F07_01050;Parent=gene-C9F07_01050;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750632.1;locus_tag=C9F07_01050;product=Eaa protein;pseudo=true;transl_table=11 PYKI01000155.1 Genbank gene 2909 3382 . - . ID=gene-C9F07_01055;Name=C9F07_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01055 PYKI01000155.1 Protein Homology CDS 2909 3382 . - 0 ID=cds-TGE30071.1;Parent=gene-C9F07_01055;Dbxref=NCBI_GP:TGE30071.1;Name=TGE30071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455505.1;locus_tag=C9F07_01055;product=SAM-dependent methyltransferase;protein_id=TGE30071.1;transl_table=11 PYKI01000155.1 Genbank pseudogene 3382 3675 . - . ID=gene-C9F07_01060;Name=C9F07_01060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01060;pseudo=true PYKI01000155.1 Protein Homology CDS 3382 3675 . - 0 ID=cds-C9F07_01060;Parent=gene-C9F07_01060;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289888.1;locus_tag=C9F07_01060;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000155.1 Genbank pseudogene 3787 4114 . - . ID=gene-C9F07_01065;Name=C9F07_01065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01065;pseudo=true PYKI01000155.1 Protein Homology CDS 3787 4114 . - 1 ID=cds-C9F07_01065;Parent=gene-C9F07_01065;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016023185.1;locus_tag=C9F07_01065;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001068.1 1 7947 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001068.1 Genbank region 1 7947 . + . ID=PYKI01001068.1:1..7947;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001068.1 Genbank gene 1 507 . - . ID=gene-C9F07_09845;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=C9F07_09845;partial=true;start_range=.,1 PYKI01001068.1 Protein Homology CDS 1 507 . - 0 ID=cds-TGD96011.1;Parent=gene-C9F07_09845;Dbxref=NCBI_GP:TGD96011.1;Name=TGD96011.1;Note=FadI%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadJ%3B similar to FadA2B2 complex%3B functions in beta-oxidation of fatty acids during anaerobic growth;gbkey=CDS;gene=fadI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456930.1;locus_tag=C9F07_09845;partial=true;product=acetyl-CoA C-acyltransferase FadI;protein_id=TGD96011.1;start_range=.,1;transl_table=11 PYKI01001068.1 Genbank gene 685 969 . - . ID=gene-C9F07_09850;Name=C9F07_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09850 PYKI01001068.1 Protein Homology CDS 685 969 . - 0 ID=cds-TGD96012.1;Parent=gene-C9F07_09850;Dbxref=NCBI_GP:TGD96012.1;Name=TGD96012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=C9F07_09850;product=DUF406 domain-containing protein;protein_id=TGD96012.1;transl_table=11 PYKI01001068.1 Genbank gene 1334 2647 . + . ID=gene-C9F07_09855;Name=C9F07_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09855 PYKI01001068.1 Protein Homology CDS 1334 2647 . + 0 ID=cds-TGD96013.1;Parent=gene-C9F07_09855;Dbxref=NCBI_GP:TGD96013.1;Name=TGD96013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461333.1;locus_tag=C9F07_09855;product=long-chain fatty acid transporter FadL;protein_id=TGD96013.1;transl_table=11 PYKI01001068.1 Genbank gene 2708 3463 . - . ID=gene-C9F07_09860;Name=C9F07_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09860 PYKI01001068.1 Protein Homology CDS 2708 3463 . - 0 ID=cds-TGD96014.1;Parent=gene-C9F07_09860;Dbxref=NCBI_GP:TGD96014.1;Name=TGD96014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456933.1;locus_tag=C9F07_09860;product=phospholipid-binding lipoprotein MlaA;protein_id=TGD96014.1;transl_table=11 PYKI01001068.1 Genbank gene 3752 4693 . + . ID=gene-C9F07_09865;Name=C9F07_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09865 PYKI01001068.1 Protein Homology CDS 3752 4693 . + 0 ID=cds-TGD96015.1;Parent=gene-C9F07_09865;Dbxref=NCBI_GP:TGD96015.1;Name=TGD96015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456934.1;locus_tag=C9F07_09865;product=hypothetical protein;protein_id=TGD96015.1;transl_table=11 PYKI01001068.1 Genbank gene 4769 4843 . + . ID=gene-C9F07_09870;Name=C9F07_09870;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_09870 PYKI01001068.1 tRNAscan-SE tRNA 4769 4843 . + . ID=rna-C9F07_09870;Parent=gene-C9F07_09870;anticodon=(pos:4802..4804);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_09870;product=tRNA-Arg PYKI01001068.1 tRNAscan-SE exon 4769 4843 . + . ID=exon-C9F07_09870-1;Parent=rna-C9F07_09870;anticodon=(pos:4802..4804);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_09870;product=tRNA-Arg PYKI01001068.1 Genbank gene 5004 6161 . + . ID=gene-C9F07_09875;Name=C9F07_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09875 PYKI01001068.1 Protein Homology CDS 5004 6161 . + 0 ID=cds-TGD96016.1;Parent=gene-C9F07_09875;Dbxref=NCBI_GP:TGD96016.1;Name=TGD96016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000958676.1;locus_tag=C9F07_09875;product=integrase;protein_id=TGD96016.1;transl_table=11 PYKI01001068.1 Genbank gene 6327 7346 . + . ID=gene-C9F07_09880;Name=C9F07_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09880 PYKI01001068.1 GeneMarkS+ CDS 6327 7346 . + 0 ID=cds-TGD96017.1;Parent=gene-C9F07_09880;Dbxref=NCBI_GP:TGD96017.1;Name=TGD96017.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F07_09880;product=hypothetical protein;protein_id=TGD96017.1;transl_table=11 PYKI01001068.1 Genbank gene 7542 7904 . + . ID=gene-C9F07_09885;Name=C9F07_09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09885 PYKI01001068.1 Protein Homology CDS 7542 7904 . + 0 ID=cds-TGD96018.1;Parent=gene-C9F07_09885;Dbxref=NCBI_GP:TGD96018.1;Name=TGD96018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416851.1;locus_tag=C9F07_09885;product=translocase;protein_id=TGD96018.1;transl_table=11 ##sequence-region PYKI01001308.1 1 1339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001308.1 Genbank region 1 1339 . + . ID=PYKI01001308.1:1..1339;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001308.1 Genbank gene 1 138 . + . ID=gene-C9F07_12245;Name=C9F07_12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12245;partial=true;start_range=.,1 PYKI01001308.1 Protein Homology CDS 1 138 . + 0 ID=cds-TGD86645.1;Parent=gene-C9F07_12245;Dbxref=NCBI_GP:TGD86645.1;Name=TGD86645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461833.1;locus_tag=C9F07_12245;partial=true;product=LysR family transcriptional regulator;protein_id=TGD86645.1;start_range=.,1;transl_table=11 PYKI01001308.1 Genbank gene 180 1339 . - . ID=gene-C9F07_12250;Name=C9F07_12250;end_range=1339,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12250;partial=true PYKI01001308.1 Protein Homology CDS 180 1339 . - 2 ID=cds-TGD86646.1;Parent=gene-C9F07_12250;Dbxref=NCBI_GP:TGD86646.1;Name=TGD86646.1;end_range=1339,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457304.1;locus_tag=C9F07_12250;partial=true;product=gluconate permease;protein_id=TGD86646.1;transl_table=11 ##sequence-region PYKI01000484.1 1 1339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000484.1 Genbank region 1 1339 . + . ID=PYKI01000484.1:1..1339;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000484.1 Genbank gene 1 357 . + . ID=gene-C9F07_03875;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=C9F07_03875;partial=true;start_range=.,1 PYKI01000484.1 Protein Homology CDS 1 357 . + 0 ID=cds-TGE18559.1;Parent=gene-C9F07_03875;Dbxref=NCBI_GP:TGE18559.1;Name=TGE18559.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455586.1;locus_tag=C9F07_03875;partial=true;product=SPI-2 type III secretion system effector PipB;protein_id=TGE18559.1;start_range=.,1;transl_table=11 PYKI01000484.1 Genbank gene 506 1027 . + . ID=gene-C9F07_03880;Name=C9F07_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03880 PYKI01000484.1 Protein Homology CDS 506 1027 . + 0 ID=cds-TGE18560.1;Parent=gene-C9F07_03880;Dbxref=NCBI_GP:TGE18560.1;Name=TGE18560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000594482.1;locus_tag=C9F07_03880;product=PipA/GogA/GtgA family type III secretion system effector;protein_id=TGE18560.1;transl_table=11 PYKI01000484.1 Genbank gene 1164 1251 . - . ID=gene-C9F07_03885;Name=C9F07_03885;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_03885 PYKI01000484.1 tRNAscan-SE tRNA 1164 1251 . - . ID=rna-C9F07_03885;Parent=gene-C9F07_03885;anticodon=(pos:complement(1215..1217));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_03885;product=tRNA-Ser PYKI01000484.1 tRNAscan-SE exon 1164 1251 . - . ID=exon-C9F07_03885-1;Parent=rna-C9F07_03885;anticodon=(pos:complement(1215..1217));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_03885;product=tRNA-Ser ##sequence-region PYKI01001204.1 1 1337 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001204.1 Genbank region 1 1337 . + . ID=PYKI01001204.1:1..1337;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001204.1 Genbank pseudogene 1 1256 . - . ID=gene-C9F07_11290;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=pseudogene;locus_tag=C9F07_11290;pseudo=true PYKI01001204.1 Protein Homology CDS 1 1256 . - 0 ID=cds-C9F07_11290;Parent=gene-C9F07_11290;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455588.1;locus_tag=C9F07_11290;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;pseudo=true;transl_table=11 ##sequence-region PYKI01000653.1 1 1337 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000653.1 Genbank region 1 1337 . + . ID=PYKI01000653.1:1..1337;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000653.1 Genbank gene 1 625 . - . ID=gene-C9F07_05665;Name=C9F07_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05665;partial=true;start_range=.,1 PYKI01000653.1 Protein Homology CDS 1 625 . - 0 ID=cds-TGE12254.1;Parent=gene-C9F07_05665;Dbxref=NCBI_GP:TGE12254.1;Name=TGE12254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455084.1;locus_tag=C9F07_05665;partial=true;product=adenylate kinase;protein_id=TGE12254.1;start_range=.,1;transl_table=11 PYKI01000653.1 Genbank gene 542 763 . + . ID=gene-C9F07_05670;Name=C9F07_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05670 PYKI01000653.1 Protein Homology CDS 542 763 . + 0 ID=cds-TGE12252.1;Parent=gene-C9F07_05670;Dbxref=NCBI_GP:TGE12252.1;Name=TGE12252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675142.1;locus_tag=C9F07_05670;product=hypothetical protein;protein_id=TGE12252.1;transl_table=11 PYKI01000653.1 Genbank gene 867 1337 . - . ID=gene-C9F07_05675;Name=C9F07_05675;end_range=1337,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05675;partial=true PYKI01000653.1 Protein Homology CDS 867 1337 . - 0 ID=cds-TGE12253.1;Parent=gene-C9F07_05675;Dbxref=NCBI_GP:TGE12253.1;Name=TGE12253.1;end_range=1337,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455083.1;locus_tag=C9F07_05675;partial=true;product=hypothetical protein;protein_id=TGE12253.1;transl_table=11 ##sequence-region PYKI01001015.1 1 1335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001015.1 Genbank region 1 1335 . + . ID=PYKI01001015.1:1..1335;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001015.1 Genbank pseudogene 55 192 . - . ID=gene-C9F07_09320;Name=C9F07_09320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09320;pseudo=true PYKI01001015.1 Protein Homology CDS 55 192 . - 0 ID=cds-C9F07_09320;Parent=gene-C9F07_09320;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=C9F07_09320;product=protease;pseudo=true;transl_table=11 PYKI01001015.1 Genbank gene 409 933 . + . ID=gene-C9F07_09325;Name=C9F07_09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09325 PYKI01001015.1 Protein Homology CDS 409 933 . + 0 ID=cds-TGD97792.1;Parent=gene-C9F07_09325;Dbxref=NCBI_GP:TGD97792.1;Name=TGD97792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=C9F07_09325;product=SCP2 domain-containing protein;protein_id=TGD97792.1;transl_table=11 PYKI01001015.1 Genbank gene 927 1335 . + . ID=gene-C9F07_09330;Name=C9F07_09330;end_range=1335,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09330;partial=true PYKI01001015.1 Protein Homology CDS 927 1335 . + 0 ID=cds-TGD97793.1;Parent=gene-C9F07_09330;Dbxref=NCBI_GP:TGD97793.1;Name=TGD97793.1;end_range=1335,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457656.1;locus_tag=C9F07_09330;partial=true;product=GNAT family N-acetyltransferase;protein_id=TGD97793.1;transl_table=11 ##sequence-region PYKI01000376.1 1 1335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000376.1 Genbank region 1 1335 . + . ID=PYKI01000376.1:1..1335;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000376.1 Genbank gene 1 944 . - . ID=gene-C9F07_02840;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=C9F07_02840;partial=true;start_range=.,1 PYKI01000376.1 Protein Homology CDS 1 944 . - 0 ID=cds-TGE23179.1;Parent=gene-C9F07_02840;Dbxref=NCBI_GP:TGE23179.1;Name=TGE23179.1;gbkey=CDS;gene=queG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458791.1;locus_tag=C9F07_02840;partial=true;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=TGE23179.1;start_range=.,1;transl_table=11 PYKI01000376.1 Genbank gene 928 1335 . + . ID=gene-C9F07_02845;Name=C9F07_02845;end_range=1335,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02845;partial=true PYKI01000376.1 Protein Homology CDS 928 1335 . + 0 ID=cds-TGE23180.1;Parent=gene-C9F07_02845;Dbxref=NCBI_GP:TGE23180.1;Name=TGE23180.1;end_range=1335,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458792.1;locus_tag=C9F07_02845;partial=true;product=NAD(P)H-hydrate epimerase;protein_id=TGE23180.1;transl_table=11 ##sequence-region PYKI01001976.1 1 1334 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001976.1 Genbank region 1 1334 . + . ID=PYKI01001976.1:1..1334;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001976.1 Genbank gene 1 926 . + . ID=gene-C9F07_19050;Name=C9F07_19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19050;partial=true;start_range=.,1 PYKI01001976.1 Protein Homology CDS 1 926 . + 2 ID=cds-TGD60270.1;Parent=gene-C9F07_19050;Dbxref=NCBI_GP:TGD60270.1;Name=TGD60270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=C9F07_19050;partial=true;product=hypothetical protein;protein_id=TGD60270.1;start_range=.,1;transl_table=11 PYKI01001976.1 Genbank gene 1084 1334 . - . ID=gene-C9F07_19055;Name=C9F07_19055;end_range=1334,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19055;partial=true PYKI01001976.1 Protein Homology CDS 1084 1334 . - 2 ID=cds-TGD60271.1;Parent=gene-C9F07_19055;Dbxref=NCBI_GP:TGD60271.1;Name=TGD60271.1;end_range=1334,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457999.1;locus_tag=C9F07_19055;partial=true;product=hypothetical protein;protein_id=TGD60271.1;transl_table=11 ##sequence-region PYKI01002022.1 1 1333 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002022.1 Genbank region 1 1333 . + . ID=PYKI01002022.1:1..1333;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002022.1 Genbank gene 1 1090 . - . ID=gene-C9F07_19515;Name=C9F07_19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19515;partial=true;start_range=.,1 PYKI01002022.1 Protein Homology CDS 1 1090 . - 0 ID=cds-TGD60063.1;Parent=gene-C9F07_19515;Dbxref=NCBI_GP:TGD60063.1;Name=TGD60063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=C9F07_19515;partial=true;product=N-methyl-L-tryptophan oxidase;protein_id=TGD60063.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001864.1 1 1333 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001864.1 Genbank region 1 1333 . + . ID=PYKI01001864.1:1..1333;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001864.1 Genbank gene 1 667 . - . ID=gene-C9F07_17955;Name=C9F07_17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17955;partial=true;start_range=.,1 PYKI01001864.1 Protein Homology CDS 1 667 . - 0 ID=cds-TGD62967.1;Parent=gene-C9F07_17955;Dbxref=NCBI_GP:TGD62967.1;Name=TGD62967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=C9F07_17955;partial=true;product=cell division protein ZapE;protein_id=TGD62967.1;start_range=.,1;transl_table=11 PYKI01001864.1 Genbank gene 860 1258 . + . ID=gene-C9F07_17960;Name=C9F07_17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17960 PYKI01001864.1 Protein Homology CDS 860 1258 . + 0 ID=cds-TGD62968.1;Parent=gene-C9F07_17960;Dbxref=NCBI_GP:TGD62968.1;Name=TGD62968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=C9F07_17960;product=hypothetical protein;protein_id=TGD62968.1;transl_table=11 ##sequence-region PYKI01002435.1 1 1330 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002435.1 Genbank region 1 1330 . + . ID=PYKI01002435.1:1..1330;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002435.1 Genbank gene 1 995 . - . ID=gene-C9F07_24075;Name=C9F07_24075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24075;partial=true;start_range=.,1 PYKI01002435.1 Protein Homology CDS 1 995 . - 0 ID=cds-TGD51193.1;Parent=gene-C9F07_24075;Dbxref=NCBI_GP:TGD51193.1;Name=TGD51193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461868.1;locus_tag=C9F07_24075;partial=true;product=NADPH-dependent assimilatory sulfite reductase hemoprotein subunit;protein_id=TGD51193.1;start_range=.,1;transl_table=11 PYKI01002435.1 Genbank gene 995 1330 . - . ID=gene-C9F07_24080;Name=cysJ;end_range=1330,.;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=C9F07_24080;partial=true PYKI01002435.1 Protein Homology CDS 995 1330 . - 0 ID=cds-TGD51194.1;Parent=gene-C9F07_24080;Dbxref=NCBI_GP:TGD51194.1;Name=TGD51194.1;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;end_range=1330,.;gbkey=CDS;gene=cysJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457337.1;locus_tag=C9F07_24080;partial=true;product=sulfite reductase subunit alpha;protein_id=TGD51194.1;transl_table=11 ##sequence-region PYKI01000609.1 1 4094 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000609.1 Genbank region 1 4094 . + . ID=PYKI01000609.1:1..4094;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000609.1 Genbank gene 1 810 . + . ID=gene-C9F07_05210;Name=C9F07_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05210;partial=true;start_range=.,1 PYKI01000609.1 Protein Homology CDS 1 810 . + 0 ID=cds-TGE13917.1;Parent=gene-C9F07_05210;Dbxref=NCBI_GP:TGE13917.1;Name=TGE13917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=C9F07_05210;partial=true;product=cellulose biosynthesis protein BcsC;protein_id=TGE13917.1;start_range=.,1;transl_table=11 PYKI01000609.1 Genbank gene 814 1005 . + . ID=gene-C9F07_05215;Name=C9F07_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05215 PYKI01000609.1 Protein Homology CDS 814 1005 . + 0 ID=cds-TGE13918.1;Parent=gene-C9F07_05215;Dbxref=NCBI_GP:TGE13918.1;Name=TGE13918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219335.1;locus_tag=C9F07_05215;product=hypothetical protein;protein_id=TGE13918.1;transl_table=11 PYKI01000609.1 Genbank gene 984 2990 . + . ID=gene-C9F07_05220;Name=C9F07_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05220 PYKI01000609.1 Protein Homology CDS 984 2990 . + 0 ID=cds-TGE13919.1;Parent=gene-C9F07_05220;Dbxref=NCBI_GP:TGE13919.1;Name=TGE13919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=C9F07_05220;product=biofilm formation regulator HmsP;protein_id=TGE13919.1;transl_table=11 PYKI01000609.1 Genbank gene 3148 4094 . + . ID=gene-C9F07_05225;Name=C9F07_05225;end_range=4094,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05225;partial=true PYKI01000609.1 Protein Homology CDS 3148 4094 . + 0 ID=cds-TGE13920.1;Parent=gene-C9F07_05225;Dbxref=NCBI_GP:TGE13920.1;Name=TGE13920.1;Note=involved in the transport of C4-dicarboxylates across the membrane;end_range=4094,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=C9F07_05225;partial=true;product=C4-dicarboxylate transporter DctA;protein_id=TGE13920.1;transl_table=11 ##sequence-region PYKI01002682.1 1 1329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002682.1 Genbank region 1 1329 . + . ID=PYKI01002682.1:1..1329;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002682.1 Genbank gene 265 1074 . + . ID=gene-C9F07_26720;Name=C9F07_26720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26720 PYKI01002682.1 Protein Homology CDS 265 1074 . + 0 ID=cds-TGD48660.1;Parent=gene-C9F07_26720;Dbxref=NCBI_GP:TGD48660.1;Name=TGD48660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455376.1;locus_tag=C9F07_26720;product=HAD family hydrolase;protein_id=TGD48660.1;transl_table=11 PYKI01002682.1 Genbank gene 1152 1329 . - . ID=gene-C9F07_26725;Name=C9F07_26725;end_range=1329,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26725;partial=true PYKI01002682.1 Protein Homology CDS 1152 1329 . - 1 ID=cds-TGD48661.1;Parent=gene-C9F07_26725;Dbxref=NCBI_GP:TGD48661.1;Name=TGD48661.1;end_range=1329,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415344.1;locus_tag=C9F07_26725;partial=true;product=hypothetical protein;protein_id=TGD48661.1;transl_table=11 ##sequence-region PYKI01003049.1 1 1329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003049.1 Genbank region 1 1329 . + . ID=PYKI01003049.1:1..1329;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003049.1 Genbank gene 1 1072 . - . ID=gene-C9F07_30595;Name=C9F07_30595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30595;partial=true;start_range=.,1 PYKI01003049.1 Protein Homology CDS 1 1072 . - 0 ID=cds-TGD41009.1;Parent=gene-C9F07_30595;Dbxref=NCBI_GP:TGD41009.1;Name=TGD41009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457084.1;locus_tag=C9F07_30595;partial=true;product=3-phenylpropionate MFS transporter;protein_id=TGD41009.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002045.1 1 1329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002045.1 Genbank region 1 1329 . + . ID=PYKI01002045.1:1..1329;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002045.1 Genbank gene 1 291 . + . ID=gene-C9F07_19780;Name=C9F07_19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19780;partial=true;start_range=.,1 PYKI01002045.1 Protein Homology CDS 1 291 . + 0 ID=cds-TGD59978.1;Parent=gene-C9F07_19780;Dbxref=NCBI_GP:TGD59978.1;Name=TGD59978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=C9F07_19780;partial=true;product=hypothetical protein;protein_id=TGD59978.1;start_range=.,1;transl_table=11 PYKI01002045.1 Genbank gene 308 931 . + . ID=gene-C9F07_19785;Name=C9F07_19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19785 PYKI01002045.1 Protein Homology CDS 308 931 . + 0 ID=cds-TGD59979.1;Parent=gene-C9F07_19785;Dbxref=NCBI_GP:TGD59979.1;Name=TGD59979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=C9F07_19785;product=protein disulfide oxidoreductase DsbA;protein_id=TGD59979.1;transl_table=11 PYKI01002045.1 Genbank gene 944 1329 . - . ID=gene-C9F07_19790;Name=C9F07_19790;end_range=1329,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19790;partial=true PYKI01002045.1 Protein Homology CDS 944 1329 . - 2 ID=cds-TGD59980.1;Parent=gene-C9F07_19790;Dbxref=NCBI_GP:TGD59980.1;Name=TGD59980.1;end_range=1329,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458050.1;locus_tag=C9F07_19790;partial=true;product=acyltransferase;protein_id=TGD59980.1;transl_table=11 ##sequence-region PYKI01003246.1 1 1328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003246.1 Genbank region 1 1328 . + . ID=PYKI01003246.1:1..1328;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003246.1 Genbank pseudogene 1 1136 . + . ID=gene-C9F07_32680;Name=C9F07_32680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32680;pseudo=true PYKI01003246.1 Protein Homology CDS 1 1136 . + 2 ID=cds-C9F07_32680;Parent=gene-C9F07_32680;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003905541.1;locus_tag=C9F07_32680;product=phosphoglucosamine mutase;pseudo=true;transl_table=11 PYKI01003246.1 Genbank pseudogene 1164 1289 . + . ID=gene-C9F07_32685;Name=C9F07_32685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32685;pseudo=true PYKI01003246.1 Protein Homology CDS 1164 1289 . + 0 ID=cds-C9F07_32685;Parent=gene-C9F07_32685;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641165.1;locus_tag=C9F07_32685;product=preprotein translocase subunit SecG;pseudo=true;transl_table=11 ##sequence-region PYKI01003566.1 1 1328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003566.1 Genbank region 1 1328 . + . ID=PYKI01003566.1:1..1328;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003566.1 Genbank gene 1 92 . + . ID=gene-C9F07_36005;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=C9F07_36005;partial=true;start_range=.,1 PYKI01003566.1 Protein Homology CDS 1 92 . + 2 ID=cds-TGD30338.1;Parent=gene-C9F07_36005;Dbxref=NCBI_GP:TGD30338.1;Name=TGD30338.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456131.1;locus_tag=C9F07_36005;partial=true;product=SPI-2 type III secretion system chaperone SseA;protein_id=TGD30338.1;start_range=.,1;transl_table=11 PYKI01003566.1 Genbank pseudogene 99 689 . + . ID=gene-C9F07_36010;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=pseudogene;locus_tag=C9F07_36010;pseudo=true PYKI01003566.1 Protein Homology CDS 99 689 . + 0 ID=cds-C9F07_36010;Parent=gene-C9F07_36010;Note=internal stop;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456130.1;locus_tag=C9F07_36010;product=SPI-2 type III secretion system translocon protein SseB;pseudo=true;transl_table=11 PYKI01003566.1 Genbank gene 686 1159 . + . ID=gene-C9F07_36015;Name=C9F07_36015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36015 PYKI01003566.1 Protein Homology CDS 686 1159 . + 0 ID=cds-TGD30339.1;Parent=gene-C9F07_36015;Dbxref=NCBI_GP:TGD30339.1;Name=TGD30339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=C9F07_36015;product=CesD/SycD/LcrH family type III secretion system chaperone;protein_id=TGD30339.1;transl_table=11 ##sequence-region PYKI01001443.1 1 1327 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001443.1 Genbank region 1 1327 . + . ID=PYKI01001443.1:1..1327;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001443.1 Genbank gene 1 377 . - . ID=gene-C9F07_13655;Name=C9F07_13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13655;partial=true;start_range=.,1 PYKI01001443.1 Protein Homology CDS 1 377 . - 0 ID=cds-TGD83686.1;Parent=gene-C9F07_13655;Dbxref=NCBI_GP:TGD83686.1;Name=TGD83686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=C9F07_13655;partial=true;product=glycosyltransferase;protein_id=TGD83686.1;start_range=.,1;transl_table=11 PYKI01001443.1 Genbank gene 670 1327 . - . ID=gene-C9F07_13660;Name=C9F07_13660;end_range=1327,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13660;partial=true PYKI01001443.1 Protein Homology CDS 670 1327 . - 1 ID=cds-TGD83687.1;Parent=gene-C9F07_13660;Dbxref=NCBI_GP:TGD83687.1;Name=TGD83687.1;end_range=1327,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=C9F07_13660;partial=true;product=L-threonine 3-dehydrogenase;protein_id=TGD83687.1;transl_table=11 ##sequence-region PYKI01000188.1 1 1326 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000188.1 Genbank region 1 1326 . + . ID=PYKI01000188.1:1..1326;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000188.1 Genbank gene 1 1326 . - . ID=gene-C9F07_01270;Name=mrcB;end_range=1326,.;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=C9F07_01270;partial=true;start_range=.,1 PYKI01000188.1 Protein Homology CDS 1 1326 . - 1 ID=cds-TGE30037.1;Parent=gene-C9F07_01270;Dbxref=NCBI_GP:TGE30037.1;Name=TGE30037.1;end_range=1326,.;gbkey=CDS;gene=mrcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=C9F07_01270;partial=true;product=penicillin-binding protein 1B;protein_id=TGE30037.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001805.1 1 1326 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001805.1 Genbank region 1 1326 . + . ID=PYKI01001805.1:1..1326;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001805.1 Genbank gene 1 1326 . - . ID=gene-C9F07_17385;Name=C9F07_17385;end_range=1326,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17385;partial=true;start_range=.,1 PYKI01001805.1 Protein Homology CDS 1 1326 . - 1 ID=cds-TGD65500.1;Parent=gene-C9F07_17385;Dbxref=NCBI_GP:TGD65500.1;Name=TGD65500.1;end_range=1326,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458247.1;locus_tag=C9F07_17385;partial=true;product=hypothetical protein;protein_id=TGD65500.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002193.1 1 1326 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002193.1 Genbank region 1 1326 . + . ID=PYKI01002193.1:1..1326;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002193.1 Genbank gene 110 973 . + . ID=gene-C9F07_21325;Name=C9F07_21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21325 PYKI01002193.1 Protein Homology CDS 110 973 . + 0 ID=cds-TGD56606.1;Parent=gene-C9F07_21325;Dbxref=NCBI_GP:TGD56606.1;Name=TGD56606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=C9F07_21325;product=neutral zinc metallopeptidase;protein_id=TGD56606.1;transl_table=11 PYKI01002193.1 Genbank gene 989 1326 . + . ID=gene-C9F07_21330;Name=C9F07_21330;end_range=1326,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21330;partial=true PYKI01002193.1 Protein Homology CDS 989 1326 . + 0 ID=cds-TGD56605.1;Parent=gene-C9F07_21330;Dbxref=NCBI_GP:TGD56605.1;Name=TGD56605.1;Note=cetylates the wobble base C34 of the elongation-specific methionine tRNA;end_range=1326,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=C9F07_21330;partial=true;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=TGD56605.1;transl_table=11 ##sequence-region PYKI01002872.1 1 1325 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002872.1 Genbank region 1 1325 . + . ID=PYKI01002872.1:1..1325;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002872.1 Genbank gene 1 1325 . - . ID=gene-C9F07_28780;Name=C9F07_28780;end_range=1325,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28780;partial=true;start_range=.,1 PYKI01002872.1 Protein Homology CDS 1 1325 . - 2 ID=cds-TGD44500.1;Parent=gene-C9F07_28780;Dbxref=NCBI_GP:TGD44500.1;Name=TGD44500.1;end_range=1325,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457352.1;locus_tag=C9F07_28780;partial=true;product=GTP diphosphokinase;protein_id=TGD44500.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001150.1 1 4093 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001150.1 Genbank region 1 4093 . + . ID=PYKI01001150.1:1..4093;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001150.1 Genbank gene 210 578 . - . ID=gene-C9F07_10725;Name=C9F07_10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10725 PYKI01001150.1 Protein Homology CDS 210 578 . - 0 ID=cds-TGD93700.1;Parent=gene-C9F07_10725;Dbxref=NCBI_GP:TGD93700.1;Name=TGD93700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457617.1;locus_tag=C9F07_10725;product=DUF1090 domain-containing protein;protein_id=TGD93700.1;transl_table=11 PYKI01001150.1 Genbank gene 723 1106 . - . ID=gene-C9F07_10730;Name=C9F07_10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10730 PYKI01001150.1 Protein Homology CDS 723 1106 . - 0 ID=cds-TGD93701.1;Parent=gene-C9F07_10730;Dbxref=NCBI_GP:TGD93701.1;Name=TGD93701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457616.1;locus_tag=C9F07_10730;product=EnvZ/OmpR regulon moderator;protein_id=TGD93701.1;transl_table=11 PYKI01001150.1 Genbank gene 1110 1772 . - . ID=gene-C9F07_10735;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=C9F07_10735 PYKI01001150.1 Protein Homology CDS 1110 1772 . - 0 ID=cds-TGD93702.1;Parent=gene-C9F07_10735;Dbxref=NCBI_GP:TGD93702.1;Name=TGD93702.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457615.1;locus_tag=C9F07_10735;product=DedA family protein;protein_id=TGD93702.1;transl_table=11 PYKI01001150.1 Genbank gene 2025 2225 . + . ID=gene-C9F07_10740;Name=C9F07_10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10740 PYKI01001150.1 Protein Homology CDS 2025 2225 . + 0 ID=cds-TGD93703.1;Parent=gene-C9F07_10740;Dbxref=NCBI_GP:TGD93703.1;Name=TGD93703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751451.1;locus_tag=C9F07_10740;product=hypothetical protein;protein_id=TGD93703.1;transl_table=11 PYKI01001150.1 Genbank gene 2222 3466 . - . ID=gene-C9F07_10745;Name=C9F07_10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10745 PYKI01001150.1 Protein Homology CDS 2222 3466 . - 0 ID=cds-TGD93704.1;Parent=gene-C9F07_10745;Dbxref=NCBI_GP:TGD93704.1;Name=TGD93704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=C9F07_10745;product=serine/threonine transporter SstT;protein_id=TGD93704.1;transl_table=11 PYKI01001150.1 Genbank gene 3721 4093 . - . ID=gene-C9F07_10750;Name=C9F07_10750;end_range=4093,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10750;partial=true PYKI01001150.1 Protein Homology CDS 3721 4093 . - 1 ID=cds-TGD93705.1;Parent=gene-C9F07_10750;Dbxref=NCBI_GP:TGD93705.1;Name=TGD93705.1;end_range=4093,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=C9F07_10750;partial=true;product=hypothetical protein;protein_id=TGD93705.1;transl_table=11 ##sequence-region PYKI01001370.1 1 1324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001370.1 Genbank region 1 1324 . + . ID=PYKI01001370.1:1..1324;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001370.1 Genbank gene 1 146 . + . ID=gene-C9F07_12880;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=C9F07_12880;partial=true;start_range=.,1 PYKI01001370.1 Protein Homology CDS 1 146 . + 2 ID=cds-TGD84763.1;Parent=gene-C9F07_12880;Dbxref=NCBI_GP:TGD84763.1;Name=TGD84763.1;Note=para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine;gbkey=CDS;gene=pabB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456331.1;locus_tag=C9F07_12880;partial=true;product=aminodeoxychorismate synthase component I;protein_id=TGD84763.1;start_range=.,1;transl_table=11 PYKI01001370.1 Genbank gene 150 728 . + . ID=gene-C9F07_12885;Name=C9F07_12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12885 PYKI01001370.1 Protein Homology CDS 150 728 . + 0 ID=cds-TGD84764.1;Parent=gene-C9F07_12885;Dbxref=NCBI_GP:TGD84764.1;Name=TGD84764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456332.1;locus_tag=C9F07_12885;product=coenzyme A pyrophosphatase;protein_id=TGD84764.1;transl_table=11 PYKI01001370.1 Genbank gene 992 1324 . + . ID=gene-C9F07_12890;Name=C9F07_12890;end_range=1324,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12890;partial=true PYKI01001370.1 Protein Homology CDS 992 1324 . + 0 ID=cds-TGD84765.1;Parent=gene-C9F07_12890;Dbxref=NCBI_GP:TGD84765.1;Name=TGD84765.1;Note=catalyzes the formation of pyruvate from serine;end_range=1324,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456333.1;locus_tag=C9F07_12890;partial=true;product=L-serine ammonia-lyase;protein_id=TGD84765.1;transl_table=11 ##sequence-region PYKI01002064.1 1 1324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002064.1 Genbank region 1 1324 . + . ID=PYKI01002064.1:1..1324;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002064.1 Genbank pseudogene 54 878 . + . ID=gene-C9F07_19980;Name=psd;gbkey=Gene;gene=psd;gene_biotype=pseudogene;locus_tag=C9F07_19980;pseudo=true PYKI01002064.1 Protein Homology CDS 54 878 . + 0 ID=cds-C9F07_19980;Parent=gene-C9F07_19980;Note=internal stop;gbkey=CDS;gene=psd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001785761.1;locus_tag=C9F07_19980;product=phosphatidylserine decarboxylase;pseudo=true;transl_table=11 PYKI01002064.1 Genbank gene 897 1324 . + . ID=gene-C9F07_19985;Name=C9F07_19985;end_range=1324,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19985;partial=true PYKI01002064.1 Protein Homology CDS 897 1324 . + 0 ID=cds-TGD59353.1;Parent=gene-C9F07_19985;Dbxref=NCBI_GP:TGD59353.1;Name=TGD59353.1;end_range=1324,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458786.1;locus_tag=C9F07_19985;partial=true;product=miniconductance mechanosensitive channel MscM;protein_id=TGD59353.1;transl_table=11 ##sequence-region PYKI01002619.1 1 1322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002619.1 Genbank region 1 1322 . + . ID=PYKI01002619.1:1..1322;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002619.1 Genbank pseudogene 102 992 . + . ID=gene-C9F07_26040;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=pseudogene;locus_tag=C9F07_26040;pseudo=true PYKI01002619.1 Protein Homology CDS 102 992 . + 0 ID=cds-C9F07_26040;Parent=gene-C9F07_26040;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455250.1;locus_tag=C9F07_26040;product=tricarballylate/proton symporter TcuC;pseudo=true;transl_table=11 PYKI01002619.1 Genbank pseudogene 1041 1253 . - . ID=gene-C9F07_26045;Name=C9F07_26045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26045;pseudo=true PYKI01002619.1 Protein Homology CDS 1041 1253 . - 0 ID=cds-C9F07_26045;Parent=gene-C9F07_26045;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455249.1;locus_tag=C9F07_26045;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001093.1 1 1321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001093.1 Genbank region 1 1321 . + . ID=PYKI01001093.1:1..1321;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001093.1 Genbank gene 104 1012 . + . ID=gene-C9F07_10175;Name=C9F07_10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10175 PYKI01001093.1 Protein Homology CDS 104 1012 . + 0 ID=cds-TGD95397.1;Parent=gene-C9F07_10175;Dbxref=NCBI_GP:TGD95397.1;Name=TGD95397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457138.1;locus_tag=C9F07_10175;product=gluconolactonase;protein_id=TGD95397.1;transl_table=11 PYKI01001093.1 Genbank gene 973 1321 . - . ID=gene-C9F07_10180;Name=pheA;end_range=1321,.;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=C9F07_10180;partial=true PYKI01001093.1 Protein Homology CDS 973 1321 . - 1 ID=cds-TGD95398.1;Parent=gene-C9F07_10180;Dbxref=NCBI_GP:TGD95398.1;Name=TGD95398.1;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;end_range=1321,.;gbkey=CDS;gene=pheA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457137.1;locus_tag=C9F07_10180;partial=true;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=TGD95398.1;transl_table=11 ##sequence-region PYKI01002547.1 1 1321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002547.1 Genbank region 1 1321 . + . ID=PYKI01002547.1:1..1321;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002547.1 Genbank gene 1 243 . - . ID=gene-C9F07_25270;Name=C9F07_25270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25270;partial=true;start_range=.,1 PYKI01002547.1 Protein Homology CDS 1 243 . - 0 ID=cds-TGD49948.1;Parent=gene-C9F07_25270;Dbxref=NCBI_GP:TGD49948.1;Name=TGD49948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311386.1;locus_tag=C9F07_25270;partial=true;product=hypothetical protein;protein_id=TGD49948.1;start_range=.,1;transl_table=11 PYKI01002547.1 Genbank gene 331 957 . - . ID=gene-C9F07_25275;Name=C9F07_25275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25275 PYKI01002547.1 Protein Homology CDS 331 957 . - 0 ID=cds-TGD49949.1;Parent=gene-C9F07_25275;Dbxref=NCBI_GP:TGD49949.1;Name=TGD49949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=C9F07_25275;product=uracil phosphoribosyltransferase;protein_id=TGD49949.1;transl_table=11 ##sequence-region PYKI01001974.1 1 1320 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001974.1 Genbank region 1 1320 . + . ID=PYKI01001974.1:1..1320;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001974.1 Genbank gene 1 527 . - . ID=gene-C9F07_19030;Name=C9F07_19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19030;partial=true;start_range=.,1 PYKI01001974.1 Protein Homology CDS 1 527 . - 0 ID=cds-TGD60282.1;Parent=gene-C9F07_19030;Dbxref=NCBI_GP:TGD60282.1;Name=TGD60282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=C9F07_19030;partial=true;product=trehalose-phosphatase;protein_id=TGD60282.1;start_range=.,1;transl_table=11 PYKI01001974.1 Genbank pseudogene 750 930 . - . ID=gene-C9F07_19035;Name=C9F07_19035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19035;pseudo=true PYKI01001974.1 Protein Homology CDS 750 930 . - 0 ID=cds-C9F07_19035;Parent=gene-C9F07_19035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675566.1;locus_tag=C9F07_19035;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001974.1 Genbank gene 1159 1320 . - . ID=gene-C9F07_19040;Name=C9F07_19040;end_range=1320,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19040;partial=true PYKI01001974.1 Protein Homology CDS 1159 1320 . - 0 ID=cds-TGD60281.1;Parent=gene-C9F07_19040;Dbxref=NCBI_GP:TGD60281.1;Name=TGD60281.1;end_range=1320,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=C9F07_19040;partial=true;product=DJ-1 family protein;protein_id=TGD60281.1;transl_table=11 ##sequence-region PYKI01002597.1 1 1320 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002597.1 Genbank region 1 1320 . + . ID=PYKI01002597.1:1..1320;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002597.1 Genbank pseudogene 1 810 . - . ID=gene-C9F07_25780;Name=C9F07_25780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25780;pseudo=true PYKI01002597.1 Protein Homology CDS 1 810 . - 0 ID=cds-C9F07_25780;Parent=gene-C9F07_25780;Note=catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456579.1;locus_tag=C9F07_25780;product=cobalamin biosynthesis protein CbiG;pseudo=true;transl_table=11 PYKI01002597.1 Genbank gene 791 1320 . - . ID=gene-C9F07_25785;Name=cbiF;end_range=1320,.;gbkey=Gene;gene=cbiF;gene_biotype=protein_coding;locus_tag=C9F07_25785;partial=true PYKI01002597.1 Protein Homology CDS 791 1320 . - 2 ID=cds-TGD49644.1;Parent=gene-C9F07_25785;Dbxref=NCBI_GP:TGD49644.1;Name=TGD49644.1;Note=catalyzes the formation of cobalt-precorrin-5 from cobalt-precorrin-4;end_range=1320,.;gbkey=CDS;gene=cbiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456580.1;locus_tag=C9F07_25785;partial=true;product=cobalt-precorrin-4 C(11)-methyltransferase;protein_id=TGD49644.1;transl_table=11 ##sequence-region PYKI01001567.1 1 1319 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001567.1 Genbank region 1 1319 . + . ID=PYKI01001567.1:1..1319;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001567.1 Genbank gene 1 226 . + . ID=gene-C9F07_15005;Name=C9F07_15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15005;partial=true;start_range=.,1 PYKI01001567.1 Protein Homology CDS 1 226 . + 1 ID=cds-TGD73723.1;Parent=gene-C9F07_15005;Dbxref=NCBI_GP:TGD73723.1;Name=TGD73723.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457412.1;locus_tag=C9F07_15005;partial=true;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=TGD73723.1;start_range=.,1;transl_table=11 PYKI01001567.1 Genbank gene 579 1319 . + . ID=gene-C9F07_15010;Name=C9F07_15010;end_range=1319,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15010;partial=true PYKI01001567.1 Protein Homology CDS 579 1319 . + 0 ID=cds-TGD73724.1;Parent=gene-C9F07_15010;Dbxref=NCBI_GP:TGD73724.1;Name=TGD73724.1;end_range=1319,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=C9F07_15010;partial=true;product=arabinose:proton symporter;protein_id=TGD73724.1;transl_table=11 ##sequence-region PYKI01002890.1 1 1318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002890.1 Genbank region 1 1318 . + . ID=PYKI01002890.1:1..1318;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002890.1 Genbank pseudogene 54 272 . - . ID=gene-C9F07_28940;Name=C9F07_28940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28940;pseudo=true PYKI01002890.1 Protein Homology CDS 54 272 . - 0 ID=cds-C9F07_28940;Parent=gene-C9F07_28940;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458784.1;locus_tag=C9F07_28940;product=glutamate/gamma-aminobutyrate family transporter YjeM;pseudo=true;transl_table=11 PYKI01002890.1 Genbank gene 498 1318 . - . ID=gene-C9F07_28945;Name=C9F07_28945;end_range=1318,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28945;partial=true PYKI01002890.1 Protein Homology CDS 498 1318 . - 2 ID=cds-TGD44031.1;Parent=gene-C9F07_28945;Dbxref=NCBI_GP:TGD44031.1;Name=TGD44031.1;Note=poxA%3B regulates pyruvate oxidase poxB;end_range=1318,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=C9F07_28945;partial=true;product=elongation factor P lysine(34) lysyltransferase;protein_id=TGD44031.1;transl_table=11 ##sequence-region PYKI01000304.1 1 4092 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000304.1 Genbank region 1 4092 . + . ID=PYKI01000304.1:1..4092;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000304.1 Genbank gene 1 252 . + . ID=gene-C9F07_02025;Name=C9F07_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02025;partial=true;start_range=.,1 PYKI01000304.1 Protein Homology CDS 1 252 . + 0 ID=cds-TGE27789.1;Parent=gene-C9F07_02025;Dbxref=NCBI_GP:TGE27789.1;Name=TGE27789.1;Note=involved in regulation of genes necessary for the entry of Salmonella into host cells;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457291.1;locus_tag=C9F07_02025;partial=true;product=SepL/TyeA/HrpJ family type III secretion system gatekeeper;protein_id=TGE27789.1;start_range=.,1;transl_table=11 PYKI01000304.1 Genbank gene 277 2334 . + . ID=gene-C9F07_02030;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=C9F07_02030 PYKI01000304.1 Protein Homology CDS 277 2334 . + 0 ID=cds-TGE27790.1;Parent=gene-C9F07_02030;Dbxref=NCBI_GP:TGE27790.1;Name=TGE27790.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457290.1;locus_tag=C9F07_02030;product=type III secretion system export apparatus protein InvA;protein_id=TGE27790.1;transl_table=11 PYKI01000304.1 Genbank gene 2358 2765 . + . ID=gene-C9F07_02035;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=C9F07_02035 PYKI01000304.1 Protein Homology CDS 2358 2765 . + 0 ID=cds-TGE27791.1;Parent=gene-C9F07_02035;Dbxref=NCBI_GP:TGE27791.1;Name=TGE27791.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457289.1;locus_tag=C9F07_02035;product=SPI-1 type III secretion system chaperone SpaK;protein_id=TGE27791.1;transl_table=11 PYKI01000304.1 Genbank gene 2762 4057 . + . ID=gene-C9F07_02040;Name=C9F07_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02040 PYKI01000304.1 Protein Homology CDS 2762 4057 . + 0 ID=cds-TGE27792.1;Parent=gene-C9F07_02040;Dbxref=NCBI_GP:TGE27792.1;Name=TGE27792.1;Note=invasion protein InvC%3B necessary for efficient entry of S.typhimurium into cultured epithelial cells%3B probable catalytic subunit of a protein translocase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457288.1;locus_tag=C9F07_02040;product=EscN/YscN/HrcN family type III secretion system ATPase;protein_id=TGE27792.1;transl_table=11 ##sequence-region PYKI01003470.1 1 1318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003470.1 Genbank region 1 1318 . + . ID=PYKI01003470.1:1..1318;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003470.1 Genbank gene 1 233 . - . ID=gene-C9F07_34885;Name=C9F07_34885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34885;partial=true;start_range=.,1 PYKI01003470.1 Protein Homology CDS 1 233 . - 0 ID=cds-TGD32889.1;Parent=gene-C9F07_34885;Dbxref=NCBI_GP:TGD32889.1;Name=TGD32889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461859.1;locus_tag=C9F07_34885;partial=true;product=subtype I-E CRISPR-associated endonuclease Cas1;protein_id=TGD32889.1;start_range=.,1;transl_table=11 PYKI01003470.1 Genbank gene 230 880 . - . ID=gene-C9F07_34890;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=C9F07_34890 PYKI01003470.1 Protein Homology CDS 230 880 . - 0 ID=cds-TGD32890.1;Parent=gene-C9F07_34890;Dbxref=NCBI_GP:TGD32890.1;Name=TGD32890.1;gbkey=CDS;gene=cas6e;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461860.1;locus_tag=C9F07_34890;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=TGD32890.1;transl_table=11 PYKI01003470.1 Genbank gene 862 1318 . - . ID=gene-C9F07_34895;Name=C9F07_34895;end_range=1318,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34895;partial=true PYKI01003470.1 Protein Homology CDS 862 1318 . - 1 ID=cds-TGD32891.1;Parent=gene-C9F07_34895;Dbxref=NCBI_GP:TGD32891.1;Name=TGD32891.1;end_range=1318,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461861.1;locus_tag=C9F07_34895;partial=true;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=TGD32891.1;transl_table=11 ##sequence-region PYKI01002434.1 1 1316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002434.1 Genbank region 1 1316 . + . ID=PYKI01002434.1:1..1316;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002434.1 Genbank pseudogene 45 1169 . + . ID=gene-C9F07_24070;Name=C9F07_24070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24070;pseudo=true PYKI01002434.1 Protein Homology CDS 45 1169 . + 0 ID=cds-C9F07_24070;Parent=gene-C9F07_24070;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457591.1;locus_tag=C9F07_24070;product=bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01002431.1 1 1315 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002431.1 Genbank region 1 1315 . + . ID=PYKI01002431.1:1..1315;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002431.1 Genbank gene 1 824 . - . ID=gene-C9F07_24025;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=C9F07_24025;partial=true;start_range=.,1 PYKI01002431.1 Protein Homology CDS 1 824 . - 0 ID=cds-TGD51253.1;Parent=gene-C9F07_24025;Dbxref=NCBI_GP:TGD51253.1;Name=TGD51253.1;Note=includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457769.1;locus_tag=C9F07_24025;partial=true;product=fatty acid oxidation complex subunit alpha FadB;protein_id=TGD51253.1;start_range=.,1;transl_table=11 PYKI01002431.1 Genbank gene 1014 1315 . + . ID=gene-C9F07_24030;Name=C9F07_24030;end_range=1315,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24030;partial=true PYKI01002431.1 Protein Homology CDS 1014 1315 . + 0 ID=cds-TGD51254.1;Parent=gene-C9F07_24030;Dbxref=NCBI_GP:TGD51254.1;Name=TGD51254.1;Note=catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters;end_range=1315,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=C9F07_24030;partial=true;product=Xaa-Pro dipeptidase;protein_id=TGD51254.1;transl_table=11 ##sequence-region PYKI01002430.1 1 1313 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002430.1 Genbank region 1 1313 . + . ID=PYKI01002430.1:1..1313;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002430.1 Genbank gene 1 512 . - . ID=gene-C9F07_24015;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=C9F07_24015;partial=true;start_range=.,1 PYKI01002430.1 Protein Homology CDS 1 512 . - 0 ID=cds-TGD51289.1;Parent=gene-C9F07_24015;Dbxref=NCBI_GP:TGD51289.1;Name=TGD51289.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=C9F07_24015;partial=true;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=TGD51289.1;start_range=.,1;transl_table=11 PYKI01002430.1 Genbank pseudogene 515 1313 . - . ID=gene-C9F07_24020;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=pseudogene;locus_tag=C9F07_24020;pseudo=true PYKI01002430.1 Protein Homology CDS 515 1313 . - 1 ID=cds-C9F07_24020;Parent=gene-C9F07_24020;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=mraY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=C9F07_24020;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;pseudo=true;transl_table=11 ##sequence-region PYKI01000214.1 1 1312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000214.1 Genbank region 1 1312 . + . ID=PYKI01000214.1:1..1312;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000214.1 Genbank gene 54 1309 . + . ID=gene-C9F07_01415;Name=C9F07_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01415 PYKI01000214.1 Protein Homology CDS 54 405 . + 0 ID=cds-TGE30015.1;Parent=gene-C9F07_01415;Dbxref=NCBI_GP:TGE30015.1;Name=TGE30015.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=C9F07_01415;product=IS3-like element ISSen1 family transposase;protein_id=TGE30015.1;transl_table=11 PYKI01000214.1 Protein Homology CDS 405 1309 . + 2 ID=cds-TGE30015.1;Parent=gene-C9F07_01415;Dbxref=NCBI_GP:TGE30015.1;Name=TGE30015.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=C9F07_01415;product=IS3-like element ISSen1 family transposase;protein_id=TGE30015.1;transl_table=11 ##sequence-region PYKI01001731.1 1 1311 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001731.1 Genbank region 1 1311 . + . ID=PYKI01001731.1:1..1311;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001731.1 Genbank gene 1 214 . + . ID=gene-C9F07_16540;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=C9F07_16540;partial=true;start_range=.,1 PYKI01001731.1 Protein Homology CDS 1 214 . + 1 ID=cds-TGD68686.1;Parent=gene-C9F07_16540;Dbxref=NCBI_GP:TGD68686.1;Name=TGD68686.1;Note=Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil%2C respectively%3B pyrimidine-specific;gbkey=CDS;gene=rihA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455230.1;locus_tag=C9F07_16540;partial=true;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=TGD68686.1;start_range=.,1;transl_table=11 PYKI01001731.1 Genbank pseudogene 303 773 . - . ID=gene-C9F07_16545;Name=C9F07_16545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16545;pseudo=true PYKI01001731.1 Protein Homology CDS 303 773 . - 0 ID=cds-C9F07_16545;Parent=gene-C9F07_16545;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455229.1;locus_tag=C9F07_16545;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001731.1 Genbank gene 866 1311 . - . ID=gene-C9F07_16550;Name=C9F07_16550;end_range=1311,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16550;partial=true PYKI01001731.1 Protein Homology CDS 866 1311 . - 2 ID=cds-TGD68687.1;Parent=gene-C9F07_16550;Dbxref=NCBI_GP:TGD68687.1;Name=TGD68687.1;end_range=1311,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455228.1;locus_tag=C9F07_16550;partial=true;product=sigma-54-dependent transcriptional regulator;protein_id=TGD68687.1;transl_table=11 ##sequence-region PYKI01000559.1 1 1311 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000559.1 Genbank region 1 1311 . + . ID=PYKI01000559.1:1..1311;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000559.1 Genbank gene 520 1083 . + . ID=gene-C9F07_04730;Name=C9F07_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04730 PYKI01000559.1 Protein Homology CDS 520 1083 . + 0 ID=cds-TGE14877.1;Parent=gene-C9F07_04730;Dbxref=NCBI_GP:TGE14877.1;Name=TGE14877.1;Note=with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols%3B AhpC reduced the hydroperoxide substrate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=C9F07_04730;product=peroxiredoxin;protein_id=TGE14877.1;transl_table=11 ##sequence-region PYKI01001305.1 1 1311 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001305.1 Genbank region 1 1311 . + . ID=PYKI01001305.1:1..1311;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001305.1 Genbank gene 1 701 . - . ID=gene-C9F07_12230;Name=C9F07_12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12230;partial=true;start_range=.,1 PYKI01001305.1 Protein Homology CDS 1 701 . - 0 ID=cds-TGD86941.1;Parent=gene-C9F07_12230;Dbxref=NCBI_GP:TGD86941.1;Name=TGD86941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=C9F07_12230;partial=true;product=transketolase;protein_id=TGD86941.1;start_range=.,1;transl_table=11 PYKI01001305.1 Genbank gene 694 1311 . - . ID=gene-C9F07_12235;Name=C9F07_12235;end_range=1311,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12235;partial=true PYKI01001305.1 Protein Homology CDS 694 1311 . - 0 ID=cds-TGD86942.1;Parent=gene-C9F07_12235;Dbxref=NCBI_GP:TGD86942.1;Name=TGD86942.1;end_range=1311,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=C9F07_12235;partial=true;product=transketolase;protein_id=TGD86942.1;transl_table=11 ##sequence-region PYKI01000610.1 1 1310 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000610.1 Genbank region 1 1310 . + . ID=PYKI01000610.1:1..1310;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000610.1 Genbank gene 1 448 . + . ID=gene-C9F07_05230;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=C9F07_05230;partial=true;start_range=.,1 PYKI01000610.1 Protein Homology CDS 1 448 . + 1 ID=cds-TGE13914.1;Parent=gene-C9F07_05230;Dbxref=NCBI_GP:TGE13914.1;Name=TGE13914.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;gene=fliA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456519.1;locus_tag=C9F07_05230;partial=true;product=RNA polymerase sigma factor FliA;protein_id=TGE13914.1;start_range=.,1;transl_table=11 PYKI01000610.1 Genbank gene 507 1058 . + . ID=gene-C9F07_05235;Name=C9F07_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05235 PYKI01000610.1 Protein Homology CDS 507 1058 . + 0 ID=cds-TGE13915.1;Parent=gene-C9F07_05235;Dbxref=NCBI_GP:TGE13915.1;Name=TGE13915.1;Note=expression activator of the class 2 type of flagellar operons%2C essential to achieve maximal cell motility%3B activator of type 1 fimbrial gene expression%3B cell density-responsive regulator%3B FliZ in Salmonella typhimurium induces HilA%2C an activator of invasion genes necessary to achieve full virulence;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456518.1;locus_tag=C9F07_05235;product=flagella biosynthesis regulatory protein FliZ;protein_id=TGE13915.1;transl_table=11 PYKI01000610.1 Genbank gene 1205 1310 . + . ID=gene-C9F07_05240;Name=C9F07_05240;end_range=1310,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05240;partial=true PYKI01000610.1 Protein Homology CDS 1205 1310 . + 0 ID=cds-TGE13916.1;Parent=gene-C9F07_05240;Dbxref=NCBI_GP:TGE13916.1;Name=TGE13916.1;end_range=1310,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456517.1;locus_tag=C9F07_05240;partial=true;product=cystine ABC transporter substrate-binding protein;protein_id=TGE13916.1;transl_table=11 ##sequence-region PYKI01002913.1 1 1309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002913.1 Genbank region 1 1309 . + . ID=PYKI01002913.1:1..1309;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002913.1 Genbank pseudogene 52 615 . - . ID=gene-C9F07_29165;Name=C9F07_29165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29165;pseudo=true PYKI01002913.1 Protein Homology CDS 52 615 . - 0 ID=cds-C9F07_29165;Parent=gene-C9F07_29165;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=C9F07_29165;product=phosphoethanolamine transferase;pseudo=true;transl_table=11 PYKI01002913.1 Genbank gene 880 1008 . - . ID=gene-C9F07_29170;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=C9F07_29170 PYKI01002913.1 Protein Homology CDS 880 1008 . - 0 ID=cds-TGD43411.1;Parent=gene-C9F07_29170;Dbxref=NCBI_GP:TGD43411.1;Name=TGD43411.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009029995.1;locus_tag=C9F07_29170;product=Mn(2+)-response protein MntS;protein_id=TGD43411.1;transl_table=11 PYKI01002913.1 Genbank gene 1194 1309 . + . ID=gene-C9F07_29175;Name=C9F07_29175;end_range=1309,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29175;partial=true PYKI01002913.1 Protein Homology CDS 1194 1309 . + 0 ID=cds-TGD43412.1;Parent=gene-C9F07_29175;Dbxref=NCBI_GP:TGD43412.1;Name=TGD43412.1;Note=Transcriptional regulator that represses the manganese transporter MntH when manganese is present;end_range=1309,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455371.1;locus_tag=C9F07_29175;partial=true;product=transcriptional regulator MntR;protein_id=TGD43412.1;transl_table=11 ##sequence-region PYKI01001950.1 1 4079 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001950.1 Genbank region 1 4079 . + . ID=PYKI01001950.1:1..4079;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001950.1 Genbank gene 1 1048 . - . ID=gene-C9F07_18785;Name=C9F07_18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18785;partial=true;start_range=.,1 PYKI01001950.1 Protein Homology CDS 1 1048 . - 0 ID=cds-TGD60527.1;Parent=gene-C9F07_18785;Dbxref=NCBI_GP:TGD60527.1;Name=TGD60527.1;Note=sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457707.1;locus_tag=C9F07_18785;partial=true;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=TGD60527.1;start_range=.,1;transl_table=11 PYKI01001950.1 Genbank gene 1142 2071 . - . ID=gene-C9F07_18790;Name=C9F07_18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18790 PYKI01001950.1 Protein Homology CDS 1142 2071 . - 0 ID=cds-TGD60528.1;Parent=gene-C9F07_18790;Dbxref=NCBI_GP:TGD60528.1;Name=TGD60528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457708.1;locus_tag=C9F07_18790;product=TIGR01212 family radical SAM protein;protein_id=TGD60528.1;transl_table=11 PYKI01001950.1 Genbank gene 2462 2656 . - . ID=gene-C9F07_18795;Name=C9F07_18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18795 PYKI01001950.1 Protein Homology CDS 2462 2656 . - 0 ID=cds-TGD60529.1;Parent=gene-C9F07_18795;Dbxref=NCBI_GP:TGD60529.1;Name=TGD60529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001348960.1;locus_tag=C9F07_18795;product=hypothetical protein;protein_id=TGD60529.1;transl_table=11 PYKI01001950.1 Genbank gene 2605 2820 . - . ID=gene-C9F07_18800;Name=C9F07_18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18800 PYKI01001950.1 Protein Homology CDS 2605 2820 . - 0 ID=cds-TGD60531.1;Parent=gene-C9F07_18800;Dbxref=NCBI_GP:TGD60531.1;Name=TGD60531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001546060.1;locus_tag=C9F07_18800;product=hypothetical protein;protein_id=TGD60531.1;transl_table=11 PYKI01001950.1 Genbank gene 2743 4079 . + . ID=gene-C9F07_18805;Name=gltB;end_range=4079,.;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=C9F07_18805;partial=true PYKI01001950.1 Protein Homology CDS 2743 4079 . + 0 ID=cds-TGD60530.1;Parent=gene-C9F07_18805;Dbxref=NCBI_GP:TGD60530.1;Name=TGD60530.1;Note=catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate;end_range=4079,.;gbkey=CDS;gene=gltB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=C9F07_18805;partial=true;product=glutamate synthase large subunit;protein_id=TGD60530.1;transl_table=11 ##sequence-region PYKI01001228.1 1 1306 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001228.1 Genbank region 1 1306 . + . ID=PYKI01001228.1:1..1306;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001228.1 Genbank gene 1 1306 . + . ID=gene-C9F07_11495;Name=C9F07_11495;end_range=1306,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11495;partial=true;start_range=.,1 PYKI01001228.1 Protein Homology CDS 1 1306 . + 1 ID=cds-TGD91034.1;Parent=gene-C9F07_11495;Dbxref=NCBI_GP:TGD91034.1;Name=TGD91034.1;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;end_range=1306,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457629.1;locus_tag=C9F07_11495;partial=true;product=formate acetyltransferase;protein_id=TGD91034.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002540.1 1 1304 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002540.1 Genbank region 1 1304 . + . ID=PYKI01002540.1:1..1304;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002540.1 Genbank gene 1 850 . - . ID=gene-C9F07_25195;Name=C9F07_25195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25195;partial=true;start_range=.,1 PYKI01002540.1 Protein Homology CDS 1 850 . - 0 ID=cds-TGD49985.1;Parent=gene-C9F07_25195;Dbxref=NCBI_GP:TGD49985.1;Name=TGD49985.1;Note=carbamoyltransferase%3B involved in the formation of the cyanate group of hydrogenase%3B catalyzes the formation of carbamoyladenylate from carbamoylphosphate and then transfers the carbamoyl group to HypE;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=C9F07_25195;partial=true;product=carbamoyltransferase HypF;protein_id=TGD49985.1;start_range=.,1;transl_table=11 PYKI01002540.1 Genbank gene 996 1304 . - . ID=gene-C9F07_25200;Name=C9F07_25200;end_range=1304,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25200;partial=true PYKI01002540.1 Protein Homology CDS 996 1304 . - 0 ID=cds-TGD49986.1;Parent=gene-C9F07_25200;Dbxref=NCBI_GP:TGD49986.1;Name=TGD49986.1;Note=involved in electron transport from formate to hydrogen;end_range=1304,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457237.1;locus_tag=C9F07_25200;partial=true;product=formate dehydrogenase;protein_id=TGD49986.1;transl_table=11 ##sequence-region PYKI01000976.1 1 1304 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000976.1 Genbank region 1 1304 . + . ID=PYKI01000976.1:1..1304;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000976.1 Genbank pseudogene 109 726 . - . ID=gene-C9F07_08905;Name=C9F07_08905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08905;pseudo=true PYKI01000976.1 Protein Homology CDS 109 726 . - 0 ID=cds-C9F07_08905;Parent=gene-C9F07_08905;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462036.1;locus_tag=C9F07_08905;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 PYKI01000976.1 Genbank gene 818 1304 . + . ID=gene-C9F07_08910;Name=C9F07_08910;end_range=1304,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08910;partial=true PYKI01000976.1 Protein Homology CDS 818 1304 . + 0 ID=cds-TGD99936.1;Parent=gene-C9F07_08910;Dbxref=NCBI_GP:TGD99936.1;Name=TGD99936.1;end_range=1304,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462035.1;locus_tag=C9F07_08910;partial=true;product=CoA ester lyase;protein_id=TGD99936.1;transl_table=11 ##sequence-region PYKI01001560.1 1 1304 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001560.1 Genbank region 1 1304 . + . ID=PYKI01001560.1:1..1304;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001560.1 Genbank gene 1 1257 . - . ID=gene-C9F07_14950;Name=C9F07_14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14950;partial=true;start_range=.,1 PYKI01001560.1 Protein Homology CDS 1 1257 . - 0 ID=cds-TGD73854.1;Parent=gene-C9F07_14950;Dbxref=NCBI_GP:TGD73854.1;Name=TGD73854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218659.1;locus_tag=C9F07_14950;partial=true;product=cobyric acid synthase CobQ;protein_id=TGD73854.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001117.1 1 1301 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001117.1 Genbank region 1 1301 . + . ID=PYKI01001117.1:1..1301;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001117.1 Genbank pseudogene 48 1022 . - . ID=gene-C9F07_10400;Name=C9F07_10400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10400;pseudo=true PYKI01001117.1 Protein Homology CDS 48 1022 . - 0 ID=cds-C9F07_10400;Parent=gene-C9F07_10400;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454664.1;locus_tag=C9F07_10400;product=histidine kinase;pseudo=true;transl_table=11 PYKI01001117.1 Genbank gene 1157 1301 . - . ID=gene-C9F07_10405;Name=C9F07_10405;end_range=1301,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10405;partial=true PYKI01001117.1 Protein Homology CDS 1157 1301 . - 1 ID=cds-TGD94948.1;Parent=gene-C9F07_10405;Dbxref=NCBI_GP:TGD94948.1;Name=TGD94948.1;end_range=1301,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=C9F07_10405;partial=true;product=hypothetical protein;protein_id=TGD94948.1;transl_table=11 ##sequence-region PYKI01002080.1 1 1301 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002080.1 Genbank region 1 1301 . + . ID=PYKI01002080.1:1..1301;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002080.1 Genbank pseudogene 69 263 . - . ID=gene-C9F07_20165;Name=C9F07_20165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20165;pseudo=true PYKI01002080.1 Protein Homology CDS 69 263 . - 0 ID=cds-C9F07_20165;Parent=gene-C9F07_20165;Note=receptor for colicin S4%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455766.1;locus_tag=C9F07_20165;product=outer membrane protein OmpW;pseudo=true;transl_table=11 PYKI01002080.1 Genbank gene 601 1005 . + . ID=gene-C9F07_20170;Name=C9F07_20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20170 PYKI01002080.1 Protein Homology CDS 601 1005 . + 0 ID=cds-TGD59308.1;Parent=gene-C9F07_20170;Dbxref=NCBI_GP:TGD59308.1;Name=TGD59308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455765.1;locus_tag=C9F07_20170;product=YkgJ family cysteine cluster protein;protein_id=TGD59308.1;transl_table=11 PYKI01002080.1 Genbank gene 1031 1301 . + . ID=gene-C9F07_20175;Name=C9F07_20175;end_range=1301,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20175;partial=true PYKI01002080.1 Protein Homology CDS 1031 1301 . + 0 ID=cds-TGD59309.1;Parent=gene-C9F07_20175;Dbxref=NCBI_GP:TGD59309.1;Name=TGD59309.1;end_range=1301,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455764.1;locus_tag=C9F07_20175;partial=true;product=hypothetical protein;protein_id=TGD59309.1;transl_table=11 ##sequence-region PYKI01001905.1 1 1300 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001905.1 Genbank region 1 1300 . + . ID=PYKI01001905.1:1..1300;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001905.1 Genbank gene 1 535 . - . ID=gene-C9F07_18350;Name=C9F07_18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18350;partial=true;start_range=.,1 PYKI01001905.1 Protein Homology CDS 1 535 . - 0 ID=cds-TGD61406.1;Parent=gene-C9F07_18350;Dbxref=NCBI_GP:TGD61406.1;Name=TGD61406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=C9F07_18350;partial=true;product=penicillin-binding protein activator;protein_id=TGD61406.1;start_range=.,1;transl_table=11 PYKI01001905.1 Genbank gene 599 1300 . + . ID=gene-C9F07_18355;Name=rsmI;end_range=1300,.;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=C9F07_18355;partial=true PYKI01001905.1 Protein Homology CDS 599 1300 . + 0 ID=cds-TGD61407.1;Parent=gene-C9F07_18355;Dbxref=NCBI_GP:TGD61407.1;Name=TGD61407.1;end_range=1300,.;gbkey=CDS;gene=rsmI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=C9F07_18355;partial=true;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=TGD61407.1;transl_table=11 ##sequence-region PYKI01003522.1 1 1300 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003522.1 Genbank region 1 1300 . + . ID=PYKI01003522.1:1..1300;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003522.1 Genbank gene 1 330 . - . ID=gene-C9F07_35530;Name=C9F07_35530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35530;partial=true;start_range=.,1 PYKI01003522.1 Protein Homology CDS 1 330 . - 0 ID=cds-TGD31531.1;Parent=gene-C9F07_35530;Dbxref=NCBI_GP:TGD31531.1;Name=TGD31531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=C9F07_35530;partial=true;product=6-phospho-beta-glucosidase;protein_id=TGD31531.1;start_range=.,1;transl_table=11 PYKI01003522.1 Genbank gene 488 799 . + . ID=gene-C9F07_35535;Name=C9F07_35535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35535 PYKI01003522.1 Protein Homology CDS 488 799 . + 0 ID=cds-TGD31530.1;Parent=gene-C9F07_35535;Dbxref=NCBI_GP:TGD31530.1;Name=TGD31530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457448.1;locus_tag=C9F07_35535;product=ASCH domain-containing protein;protein_id=TGD31530.1;transl_table=11 PYKI01003522.1 Genbank pseudogene 963 1300 . + . ID=gene-C9F07_35540;Name=C9F07_35540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35540;pseudo=true PYKI01003522.1 Protein Homology CDS 963 1300 . + 0 ID=cds-C9F07_35540;Parent=gene-C9F07_35540;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457447.1;locus_tag=C9F07_35540;product=hemolysin III family protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000811.1 1 1298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000811.1 Genbank region 1 1298 . + . ID=PYKI01000811.1:1..1298;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000811.1 Genbank gene 1 165 . - . ID=gene-C9F07_07320;Name=C9F07_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07320;partial=true;start_range=.,1 PYKI01000811.1 Protein Homology CDS 1 165 . - 0 ID=cds-TGE07526.1;Parent=gene-C9F07_07320;Dbxref=NCBI_GP:TGE07526.1;Name=TGE07526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=C9F07_07320;partial=true;product=porin;protein_id=TGE07526.1;start_range=.,1;transl_table=11 PYKI01000811.1 Genbank gene 814 1125 . + . ID=gene-C9F07_07325;Name=C9F07_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07325 PYKI01000811.1 Protein Homology CDS 814 1125 . + 0 ID=cds-TGE07527.1;Parent=gene-C9F07_07325;Dbxref=NCBI_GP:TGE07527.1;Name=TGE07527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456553.1;locus_tag=C9F07_07325;product=hypothetical protein;protein_id=TGE07527.1;transl_table=11 ##sequence-region PYKI01002558.1 1 1297 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002558.1 Genbank region 1 1297 . + . ID=PYKI01002558.1:1..1297;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002558.1 Genbank gene 1 584 . + . ID=gene-C9F07_25395;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=C9F07_25395;partial=true;start_range=.,1 PYKI01002558.1 Protein Homology CDS 1 584 . + 2 ID=cds-TGD49875.1;Parent=gene-C9F07_25395;Dbxref=NCBI_GP:TGD49875.1;Name=TGD49875.1;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;gbkey=CDS;gene=ileS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454657.1;locus_tag=C9F07_25395;partial=true;product=isoleucine--tRNA ligase;protein_id=TGD49875.1;start_range=.,1;transl_table=11 PYKI01002558.1 Genbank gene 584 1084 . + . ID=gene-C9F07_25400;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=C9F07_25400 PYKI01002558.1 Protein Homology CDS 584 1084 . + 0 ID=cds-TGD49876.1;Parent=gene-C9F07_25400;Dbxref=NCBI_GP:TGD49876.1;Name=TGD49876.1;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;gbkey=CDS;gene=lspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=C9F07_25400;product=lipoprotein signal peptidase;protein_id=TGD49876.1;transl_table=11 ##sequence-region PYKI01001454.1 1 4068 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001454.1 Genbank region 1 4068 . + . ID=PYKI01001454.1:1..4068;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001454.1 Genbank gene 1 1217 . - . ID=gene-C9F07_13780;Name=C9F07_13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13780;partial=true;start_range=.,1 PYKI01001454.1 Protein Homology CDS 1 1217 . - 0 ID=cds-TGD82211.1;Parent=gene-C9F07_13780;Dbxref=NCBI_GP:TGD82211.1;Name=TGD82211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004724500.1;locus_tag=C9F07_13780;partial=true;product=AAA family ATPase;protein_id=TGD82211.1;start_range=.,1;transl_table=11 PYKI01001454.1 Genbank gene 1825 2046 . - . ID=gene-C9F07_13785;Name=C9F07_13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13785 PYKI01001454.1 Protein Homology CDS 1825 2046 . - 0 ID=cds-TGD82212.1;Parent=gene-C9F07_13785;Dbxref=NCBI_GP:TGD82212.1;Name=TGD82212.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13333.4;locus_tag=C9F07_13785;product=IS3 family transposase;protein_id=TGD82212.1;transl_table=11 PYKI01001454.1 Genbank gene 2642 4068 . - . ID=gene-C9F07_13790;Name=glyS;end_range=4068,.;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=C9F07_13790;partial=true PYKI01001454.1 Protein Homology CDS 2642 4068 . - 2 ID=cds-TGD82213.1;Parent=gene-C9F07_13790;Dbxref=NCBI_GP:TGD82213.1;Name=TGD82213.1;end_range=4068,.;gbkey=CDS;gene=glyS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=C9F07_13790;partial=true;product=glycine--tRNA ligase subunit beta;protein_id=TGD82213.1;transl_table=11 ##sequence-region PYKI01003281.1 1 1297 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003281.1 Genbank region 1 1297 . + . ID=PYKI01003281.1:1..1297;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003281.1 Genbank gene 1 548 . + . ID=gene-C9F07_32995;Name=C9F07_32995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32995;partial=true;start_range=.,1 PYKI01003281.1 Protein Homology CDS 1 548 . + 2 ID=cds-TGD36149.1;Parent=gene-C9F07_32995;Dbxref=NCBI_GP:TGD36149.1;Name=TGD36149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=C9F07_32995;partial=true;product=nickel transporter;protein_id=TGD36149.1;start_range=.,1;transl_table=11 PYKI01003281.1 Genbank pseudogene 549 1297 . - . ID=gene-C9F07_33000;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=pseudogene;locus_tag=C9F07_33000;pseudo=true PYKI01003281.1 Protein Homology CDS 549 1297 . - 2 ID=cds-C9F07_33000;Parent=gene-C9F07_33000;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=asrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457081.1;locus_tag=C9F07_33000;product=sulfite reductase subunit C;pseudo=true;transl_table=11 ##sequence-region PYKI01001961.1 1 1297 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001961.1 Genbank region 1 1297 . + . ID=PYKI01001961.1:1..1297;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001961.1 Genbank gene 80 1297 . + . ID=gene-C9F07_18930;Name=C9F07_18930;end_range=1297,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18930;partial=true PYKI01001961.1 Protein Homology CDS 80 1297 . + 0 ID=cds-TGD60397.1;Parent=gene-C9F07_18930;Dbxref=NCBI_GP:TGD60397.1;Name=TGD60397.1;end_range=1297,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001705951.1;locus_tag=C9F07_18930;partial=true;product=chitinase;protein_id=TGD60397.1;transl_table=11 ##sequence-region PYKI01002894.1 1 1294 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002894.1 Genbank region 1 1294 . + . ID=PYKI01002894.1:1..1294;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002894.1 Genbank gene 1 1215 . + . ID=gene-C9F07_28975;Name=C9F07_28975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28975;partial=true;start_range=.,1 PYKI01002894.1 Protein Homology CDS 1 1215 . + 0 ID=cds-TGD44019.1;Parent=gene-C9F07_28975;Dbxref=NCBI_GP:TGD44019.1;Name=TGD44019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230790.1;locus_tag=C9F07_28975;partial=true;product=ATP-dependent helicase;protein_id=TGD44019.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001806.1 1 1294 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001806.1 Genbank region 1 1294 . + . ID=PYKI01001806.1:1..1294;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001806.1 Genbank gene 1 662 . + . ID=gene-C9F07_17390;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=C9F07_17390;partial=true;start_range=.,1 PYKI01001806.1 Protein Homology CDS 1 662 . + 2 ID=cds-TGD65396.1;Parent=gene-C9F07_17390;Dbxref=NCBI_GP:TGD65396.1;Name=TGD65396.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456659.1;locus_tag=C9F07_17390;partial=true;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=TGD65396.1;start_range=.,1;transl_table=11 PYKI01001806.1 Genbank gene 678 1232 . + . ID=gene-C9F07_17395;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=C9F07_17395 PYKI01001806.1 Protein Homology CDS 678 1232 . + 0 ID=cds-TGD65397.1;Parent=gene-C9F07_17395;Dbxref=NCBI_GP:TGD65397.1;Name=TGD65397.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=C9F07_17395;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=TGD65397.1;transl_table=11 ##sequence-region PYKI01001497.1 1 1293 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001497.1 Genbank region 1 1293 . + . ID=PYKI01001497.1:1..1293;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001497.1 Genbank gene 1 443 . - . ID=gene-C9F07_14250;Name=C9F07_14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14250;partial=true;start_range=.,1 PYKI01001497.1 Protein Homology CDS 1 443 . - 0 ID=cds-TGD78225.1;Parent=gene-C9F07_14250;Dbxref=NCBI_GP:TGD78225.1;Name=TGD78225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456969.1;locus_tag=C9F07_14250;partial=true;product=PTS glucose transporter subunit IIA;protein_id=TGD78225.1;start_range=.,1;transl_table=11 PYKI01001497.1 Genbank gene 484 1293 . - . ID=gene-C9F07_14255;Name=ptsP;end_range=1293,.;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=C9F07_14255;partial=true PYKI01001497.1 Protein Homology CDS 484 1293 . - 0 ID=cds-TGD78226.1;Parent=gene-C9F07_14255;Dbxref=NCBI_GP:TGD78226.1;Name=TGD78226.1;end_range=1293,.;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=C9F07_14255;partial=true;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=TGD78226.1;transl_table=11 ##sequence-region PYKI01002459.1 1 1292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002459.1 Genbank region 1 1292 . + . ID=PYKI01002459.1:1..1292;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002459.1 Genbank gene 1 1292 . - . ID=gene-C9F07_24295;Name=C9F07_24295;end_range=1292,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24295;partial=true;start_range=.,1 PYKI01002459.1 Protein Homology CDS 1 1292 . - 2 ID=cds-TGD50763.1;Parent=gene-C9F07_24295;Dbxref=NCBI_GP:TGD50763.1;Name=TGD50763.1;end_range=1292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9F07_24295;partial=true;product=large repetitive protein;protein_id=TGD50763.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002344.1 1 1292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002344.1 Genbank region 1 1292 . + . ID=PYKI01002344.1:1..1292;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002344.1 Genbank gene 1 360 . + . ID=gene-C9F07_23045;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=C9F07_23045;partial=true;start_range=.,1 PYKI01002344.1 Protein Homology CDS 1 360 . + 0 ID=cds-TGD53412.1;Parent=gene-C9F07_23045;Dbxref=NCBI_GP:TGD53412.1;Name=TGD53412.1;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;gbkey=CDS;gene=queF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457363.1;locus_tag=C9F07_23045;partial=true;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=TGD53412.1;start_range=.,1;transl_table=11 PYKI01002344.1 Genbank gene 474 1292 . + . ID=gene-C9F07_23050;Name=C9F07_23050;end_range=1292,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23050;partial=true PYKI01002344.1 Protein Homology CDS 474 1292 . + 0 ID=cds-TGD53413.1;Parent=gene-C9F07_23050;Dbxref=NCBI_GP:TGD53413.1;Name=TGD53413.1;end_range=1292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077585.1;locus_tag=C9F07_23050;partial=true;product=LOG family protein;protein_id=TGD53413.1;transl_table=11 ##sequence-region PYKI01002249.1 1 1292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002249.1 Genbank region 1 1292 . + . ID=PYKI01002249.1:1..1292;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002249.1 Genbank gene 172 1292 . + . ID=gene-C9F07_21990;Name=C9F07_21990;end_range=1292,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21990;partial=true PYKI01002249.1 Protein Homology CDS 172 1292 . + 0 ID=cds-TGD55747.1;Parent=gene-C9F07_21990;Dbxref=NCBI_GP:TGD55747.1;Name=TGD55747.1;end_range=1292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457354.1;locus_tag=C9F07_21990;partial=true;product=two-component sensor histidine kinase BarA;protein_id=TGD55747.1;transl_table=11 ##sequence-region PYKI01000801.1 1 1292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000801.1 Genbank region 1 1292 . + . ID=PYKI01000801.1:1..1292;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000801.1 Genbank gene 1 135 . - . ID=gene-C9F07_07215;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=C9F07_07215;partial=true;start_range=.,1 PYKI01000801.1 Protein Homology CDS 1 135 . - 0 ID=cds-TGE09135.1;Parent=gene-C9F07_07215;Dbxref=NCBI_GP:TGE09135.1;Name=TGE09135.1;Note=hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate;gbkey=CDS;gene=ugpQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458366.1;locus_tag=C9F07_07215;partial=true;product=glycerophosphodiester phosphodiesterase;protein_id=TGE09135.1;start_range=.,1;transl_table=11 PYKI01000801.1 Genbank gene 132 1202 . - . ID=gene-C9F07_07220;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=C9F07_07220 PYKI01000801.1 Protein Homology CDS 132 1202 . - 0 ID=cds-TGE09136.1;Parent=gene-C9F07_07220;Dbxref=NCBI_GP:TGE09136.1;Name=TGE09136.1;Note=part of the UgpABCE glycerol-3-phosphate uptake system;gbkey=CDS;gene=ugpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458365.1;locus_tag=C9F07_07220;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=TGE09136.1;transl_table=11 PYKI01000801.1 Genbank gene 1204 1292 . - . ID=gene-C9F07_07225;Name=C9F07_07225;end_range=1292,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07225;partial=true PYKI01000801.1 Protein Homology CDS 1204 1292 . - 2 ID=cds-TGE09137.1;Parent=gene-C9F07_07225;Dbxref=NCBI_GP:TGE09137.1;Name=TGE09137.1;Note=with UgpABC is involved in uptake of glycerol-3-phosphate;end_range=1292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=C9F07_07225;partial=true;product=glycerol-3-phosphate transporter;protein_id=TGE09137.1;transl_table=11 ##sequence-region PYKI01001819.1 1 1291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001819.1 Genbank region 1 1291 . + . ID=PYKI01001819.1:1..1291;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001819.1 Genbank pseudogene 1 485 . + . ID=gene-C9F07_17485;Name=infB;gbkey=Gene;gene=infB;gene_biotype=pseudogene;locus_tag=C9F07_17485;pseudo=true PYKI01001819.1 Protein Homology CDS 1 485 . + 2 ID=cds-C9F07_17485;Parent=gene-C9F07_17485;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=infB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457668.1;locus_tag=C9F07_17485;product=translation initiation factor IF-2;pseudo=true;transl_table=11 PYKI01001819.1 Genbank gene 637 1038 . + . ID=gene-C9F07_17490;Name=C9F07_17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17490 PYKI01001819.1 Protein Homology CDS 637 1038 . + 0 ID=cds-TGD64880.1;Parent=gene-C9F07_17490;Dbxref=NCBI_GP:TGD64880.1;Name=TGD64880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=C9F07_17490;product=30S ribosome-binding factor RbfA;protein_id=TGD64880.1;transl_table=11 PYKI01001819.1 Genbank gene 1038 1291 . + . ID=gene-C9F07_17495;Name=truB;end_range=1291,.;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=C9F07_17495;partial=true PYKI01001819.1 Protein Homology CDS 1038 1291 . + 0 ID=cds-TGD64881.1;Parent=gene-C9F07_17495;Dbxref=NCBI_GP:TGD64881.1;Name=TGD64881.1;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;end_range=1291,.;gbkey=CDS;gene=truB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457666.1;locus_tag=C9F07_17495;partial=true;product=tRNA pseudouridine(55) synthase TruB;protein_id=TGD64881.1;transl_table=11 ##sequence-region PYKI01002189.1 1 4046 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002189.1 Genbank region 1 4046 . + . ID=PYKI01002189.1:1..4046;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002189.1 Genbank gene 1 731 . - . ID=gene-C9F07_21270;Name=C9F07_21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21270;partial=true;start_range=.,1 PYKI01002189.1 Protein Homology CDS 1 731 . - 0 ID=cds-TGD56619.1;Parent=gene-C9F07_21270;Dbxref=NCBI_GP:TGD56619.1;Name=TGD56619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460425.3;locus_tag=C9F07_21270;partial=true;product=oxidoreductase;protein_id=TGD56619.1;start_range=.,1;transl_table=11 PYKI01002189.1 Genbank gene 834 989 . + . ID=gene-C9F07_21275;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=C9F07_21275 PYKI01002189.1 Protein Homology CDS 834 989 . + 0 ID=cds-TGD56614.1;Parent=gene-C9F07_21275;Dbxref=NCBI_GP:TGD56614.1;Name=TGD56614.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991985.1;locus_tag=C9F07_21275;product=division septum protein Blr;protein_id=TGD56614.1;transl_table=11 PYKI01002189.1 Genbank gene 1288 1503 . + . ID=gene-C9F07_21280;Name=C9F07_21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21280 PYKI01002189.1 Protein Homology CDS 1288 1503 . + 0 ID=cds-TGD56615.1;Parent=gene-C9F07_21280;Dbxref=NCBI_GP:TGD56615.1;Name=TGD56615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456069.1;locus_tag=C9F07_21280;product=nucleoid-associated protein;protein_id=TGD56615.1;transl_table=11 PYKI01002189.1 Genbank gene 1592 2032 . + . ID=gene-C9F07_21285;Name=C9F07_21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21285 PYKI01002189.1 Protein Homology CDS 1592 2032 . + 0 ID=cds-TGD56620.1;Parent=gene-C9F07_21285;Dbxref=NCBI_GP:TGD56620.1;Name=TGD56620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456070.1;locus_tag=C9F07_21285;product=DUF2569 domain-containing protein;protein_id=TGD56620.1;transl_table=11 PYKI01002189.1 Genbank gene 2109 2690 . + . ID=gene-C9F07_21290;Name=C9F07_21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21290 PYKI01002189.1 Protein Homology CDS 2109 2690 . + 0 ID=cds-TGD56616.1;Parent=gene-C9F07_21290;Dbxref=NCBI_GP:TGD56616.1;Name=TGD56616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=C9F07_21290;product=electron transport complex subunit A;protein_id=TGD56616.1;transl_table=11 PYKI01002189.1 Genbank gene 2690 3268 . + . ID=gene-C9F07_21295;Name=C9F07_21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21295 PYKI01002189.1 Protein Homology CDS 2690 3268 . + 0 ID=cds-TGD56617.1;Parent=gene-C9F07_21295;Dbxref=NCBI_GP:TGD56617.1;Name=TGD56617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456072.1;locus_tag=C9F07_21295;product=electron transport complex subunit RsxB;protein_id=TGD56617.1;transl_table=11 PYKI01002189.1 Genbank gene 3261 4046 . + . ID=gene-C9F07_21300;Name=C9F07_21300;end_range=4046,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21300;partial=true PYKI01002189.1 Protein Homology CDS 3261 4046 . + 0 ID=cds-TGD56618.1;Parent=gene-C9F07_21300;Dbxref=NCBI_GP:TGD56618.1;Name=TGD56618.1;end_range=4046,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=C9F07_21300;partial=true;product=electron transport complex subunit RsxC;protein_id=TGD56618.1;transl_table=11 ##sequence-region PYKI01000511.1 1 1291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000511.1 Genbank region 1 1291 . + . ID=PYKI01000511.1:1..1291;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000511.1 Genbank gene 1 212 . + . ID=gene-C9F07_04220;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=C9F07_04220;partial=true;start_range=.,1 PYKI01000511.1 Protein Homology CDS 1 212 . + 2 ID=cds-TGE16763.1;Parent=gene-C9F07_04220;Dbxref=NCBI_GP:TGE16763.1;Name=TGE16763.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=C9F07_04220;partial=true;product=F0F1 ATP synthase subunit epsilon;protein_id=TGE16763.1;start_range=.,1;transl_table=11 PYKI01000511.1 Genbank gene 442 1140 . + . ID=gene-C9F07_04225;Name=C9F07_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04225 PYKI01000511.1 Protein Homology CDS 442 1140 . + 0 ID=cds-TGE16764.1;Parent=gene-C9F07_04225;Dbxref=NCBI_GP:TGE16764.1;Name=TGE16764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=C9F07_04225;product=permease;protein_id=TGE16764.1;transl_table=11 ##sequence-region PYKI01001144.1 1 1291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001144.1 Genbank region 1 1291 . + . ID=PYKI01001144.1:1..1291;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001144.1 Genbank gene 1 806 . + . ID=gene-C9F07_10670;Name=C9F07_10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10670;partial=true;start_range=.,1 PYKI01001144.1 Protein Homology CDS 1 806 . + 2 ID=cds-TGD94084.1;Parent=gene-C9F07_10670;Dbxref=NCBI_GP:TGD94084.1;Name=TGD94084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=C9F07_10670;partial=true;product=autotransporter domain-containing esterase;protein_id=TGD94084.1;start_range=.,1;transl_table=11 PYKI01001144.1 Genbank gene 1073 1291 . - . ID=gene-C9F07_10675;Name=C9F07_10675;end_range=1291,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10675;partial=true PYKI01001144.1 Protein Homology CDS 1073 1291 . - 0 ID=cds-TGD94085.1;Parent=gene-C9F07_10675;Dbxref=NCBI_GP:TGD94085.1;Name=TGD94085.1;Note=catalyzes the reduction of nitroaromatic compounds such as nitrofurazone%2C quinones and the anti-tumor agent CB1954%3B NAD(P)H-dependent%3B oxygen insensitive;end_range=1291,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=C9F07_10675;partial=true;product=NAD(P)H nitroreductase;protein_id=TGD94085.1;transl_table=11 ##sequence-region PYKI01003586.1 1 1289 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003586.1 Genbank region 1 1289 . + . ID=PYKI01003586.1:1..1289;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003586.1 Genbank gene 1 176 . + . ID=gene-C9F07_36180;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=C9F07_36180;partial=true;start_range=.,1 PYKI01003586.1 Protein Homology CDS 1 176 . + 2 ID=cds-TGD29991.1;Parent=gene-C9F07_36180;Dbxref=NCBI_GP:TGD29991.1;Name=TGD29991.1;Note=part of NapHG quinol dehydrogenase%3B couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456802.1;locus_tag=C9F07_36180;partial=true;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=TGD29991.1;start_range=.,1;transl_table=11 PYKI01003586.1 Genbank gene 292 741 . + . ID=gene-C9F07_36185;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=C9F07_36185 PYKI01003586.1 Protein Homology CDS 292 741 . + 0 ID=cds-TGD29992.1;Parent=gene-C9F07_36185;Dbxref=NCBI_GP:TGD29992.1;Name=TGD29992.1;Note=small subunit of periplasmic nitrate reductase%3B receives electrons from the membrane-bound NapC and passes them to NapA;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456801.1;locus_tag=C9F07_36185;product=nitrate reductase;protein_id=TGD29992.1;transl_table=11 PYKI01003586.1 Genbank gene 751 1289 . + . ID=gene-C9F07_36190;Name=C9F07_36190;end_range=1289,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36190;partial=true PYKI01003586.1 Protein Homology CDS 751 1289 . + 0 ID=cds-TGD29993.1;Parent=gene-C9F07_36190;Dbxref=NCBI_GP:TGD29993.1;Name=TGD29993.1;end_range=1289,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=C9F07_36190;partial=true;product=cytochrome c-type protein NapC;protein_id=TGD29993.1;transl_table=11 ##sequence-region PYKI01001087.1 1 1288 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001087.1 Genbank region 1 1288 . + . ID=PYKI01001087.1:1..1288;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001087.1 Genbank gene 1 1288 . - . ID=gene-C9F07_10135;Name=C9F07_10135;end_range=1288,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10135;partial=true;start_range=.,1 PYKI01001087.1 Protein Homology CDS 1 1288 . - 2 ID=cds-TGD95561.1;Parent=gene-C9F07_10135;Dbxref=NCBI_GP:TGD95561.1;Name=TGD95561.1;end_range=1288,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458559.1;locus_tag=C9F07_10135;partial=true;product=Ig domain protein;protein_id=TGD95561.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001760.1 1 1286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001760.1 Genbank region 1 1286 . + . ID=PYKI01001760.1:1..1286;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001760.1 Genbank pseudogene 21 821 . + . ID=gene-C9F07_16900;Name=C9F07_16900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16900;pseudo=true PYKI01001760.1 Protein Homology CDS 21 821 . + 0 ID=cds-C9F07_16900;Parent=gene-C9F07_16900;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455923.1;locus_tag=C9F07_16900;product=alcohol dehydrogenase AdhP;pseudo=true;transl_table=11 PYKI01001760.1 Genbank gene 912 1286 . - . ID=gene-C9F07_16905;Name=C9F07_16905;end_range=1286,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16905;partial=true PYKI01001760.1 Protein Homology CDS 912 1286 . - 0 ID=cds-TGD67997.1;Parent=gene-C9F07_16905;Dbxref=NCBI_GP:TGD67997.1;Name=TGD67997.1;end_range=1286,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=C9F07_16905;partial=true;product=formate dehydrogenase subunit gamma;protein_id=TGD67997.1;transl_table=11 ##sequence-region PYKI01001771.1 1 1283 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001771.1 Genbank region 1 1283 . + . ID=PYKI01001771.1:1..1283;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001771.1 Genbank gene 1 1283 . + . ID=gene-C9F07_17015;Name=C9F07_17015;end_range=1283,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17015;partial=true;start_range=.,1 PYKI01001771.1 Protein Homology CDS 1 1283 . + 2 ID=cds-TGD66967.1;Parent=gene-C9F07_17015;Dbxref=NCBI_GP:TGD66967.1;Name=TGD66967.1;end_range=1283,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=C9F07_17015;partial=true;product=L-fuculokinase;protein_id=TGD66967.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002863.1 1 1282 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002863.1 Genbank region 1 1282 . + . ID=PYKI01002863.1:1..1282;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002863.1 Genbank gene 1 213 . - . ID=gene-C9F07_28680;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=C9F07_28680;partial=true;start_range=.,1 PYKI01002863.1 Protein Homology CDS 1 213 . - 0 ID=cds-TGD44964.1;Parent=gene-C9F07_28680;Dbxref=NCBI_GP:TGD44964.1;Name=TGD44964.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;gbkey=CDS;gene=fruK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311087.1;locus_tag=C9F07_28680;partial=true;product=1-phosphofructokinase;protein_id=TGD44964.1;start_range=.,1;transl_table=11 PYKI01002863.1 Genbank pseudogene 213 1282 . - . ID=gene-C9F07_28685;Name=C9F07_28685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28685;pseudo=true PYKI01002863.1 Protein Homology CDS 213 1282 . - 2 ID=cds-C9F07_28685;Parent=gene-C9F07_28685;Note=phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456764.1;locus_tag=C9F07_28685;product=bifunctional PTS fructose transporter subunit IIA/HPr protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002879.1 1 1281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002879.1 Genbank region 1 1281 . + . ID=PYKI01002879.1:1..1281;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002879.1 Genbank gene 1 888 . - . ID=gene-C9F07_28840;Name=C9F07_28840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28840;partial=true;start_range=.,1 PYKI01002879.1 Protein Homology CDS 1 888 . - 0 ID=cds-TGD44476.1;Parent=gene-C9F07_28840;Dbxref=NCBI_GP:TGD44476.1;Name=TGD44476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455751.1;locus_tag=C9F07_28840;partial=true;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=TGD44476.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001535.1 1 1281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001535.1 Genbank region 1 1281 . + . ID=PYKI01001535.1:1..1281;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001535.1 Genbank gene 109 1104 . - . ID=gene-C9F07_14695;Name=C9F07_14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14695 PYKI01001535.1 Protein Homology CDS 109 1104 . - 0 ID=cds-TGD75882.1;Parent=gene-C9F07_14695;Dbxref=NCBI_GP:TGD75882.1;Name=TGD75882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457209.1;locus_tag=C9F07_14695;product=proline/glycine betaine ABC transporter substrate-binding protein ProX;protein_id=TGD75882.1;transl_table=11 ##sequence-region PYKI01002211.1 1 4041 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002211.1 Genbank region 1 4041 . + . ID=PYKI01002211.1:1..4041;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002211.1 Genbank gene 1 294 . - . ID=gene-C9F07_21520;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=C9F07_21520;partial=true;start_range=.,1 PYKI01002211.1 Protein Homology CDS 1 294 . - 0 ID=cds-TGD56498.1;Parent=gene-C9F07_21520;Dbxref=NCBI_GP:TGD56498.1;Name=TGD56498.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457157.1;locus_tag=C9F07_21520;partial=true;product=SsrA-binding protein;protein_id=TGD56498.1;start_range=.,1;transl_table=11 PYKI01002211.1 Genbank gene 444 920 . + . ID=gene-C9F07_21525;Name=C9F07_21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21525 PYKI01002211.1 Protein Homology CDS 444 920 . + 0 ID=cds-TGD56493.1;Parent=gene-C9F07_21525;Dbxref=NCBI_GP:TGD56493.1;Name=TGD56493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457156.1;locus_tag=C9F07_21525;product=type II toxin-antitoxin system RatA family toxin;protein_id=TGD56493.1;transl_table=11 PYKI01002211.1 Genbank gene 910 1200 . + . ID=gene-C9F07_21530;Name=C9F07_21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21530 PYKI01002211.1 Protein Homology CDS 910 1200 . + 0 ID=cds-TGD56494.1;Parent=gene-C9F07_21530;Dbxref=NCBI_GP:TGD56494.1;Name=TGD56494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=C9F07_21530;product=RnfH family protein;protein_id=TGD56494.1;transl_table=11 PYKI01002211.1 Genbank gene 1361 1699 . - . ID=gene-C9F07_21535;Name=C9F07_21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21535 PYKI01002211.1 Protein Homology CDS 1361 1699 . - 0 ID=cds-TGD56495.1;Parent=gene-C9F07_21535;Dbxref=NCBI_GP:TGD56495.1;Name=TGD56495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457154.1;locus_tag=C9F07_21535;product=outer membrane protein assembly factor BamE;protein_id=TGD56495.1;transl_table=11 PYKI01002211.1 Genbank gene 1848 3509 . - . ID=gene-C9F07_21540;Name=C9F07_21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21540 PYKI01002211.1 Protein Homology CDS 1848 3509 . - 0 ID=cds-TGD56496.1;Parent=gene-C9F07_21540;Dbxref=NCBI_GP:TGD56496.1;Name=TGD56496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=C9F07_21540;product=DNA repair protein RecN;protein_id=TGD56496.1;transl_table=11 PYKI01002211.1 Genbank gene 3595 4041 . - . ID=gene-C9F07_21545;Name=ppnK;end_range=4041,.;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=C9F07_21545;partial=true PYKI01002211.1 Protein Homology CDS 3595 4041 . - 0 ID=cds-TGD56497.1;Parent=gene-C9F07_21545;Dbxref=NCBI_GP:TGD56497.1;Name=TGD56497.1;Note=catalyzes the phosphorylation of NAD to NADP;end_range=4041,.;gbkey=CDS;gene=ppnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457152.1;locus_tag=C9F07_21545;partial=true;product=NAD(+) kinase;protein_id=TGD56497.1;transl_table=11 ##sequence-region PYKI01001598.1 1 1280 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001598.1 Genbank region 1 1280 . + . ID=PYKI01001598.1:1..1280;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001598.1 Genbank gene 75 794 . + . ID=gene-C9F07_15260;Name=C9F07_15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15260 PYKI01001598.1 Protein Homology CDS 75 794 . + 0 ID=cds-TGD71491.1;Parent=gene-C9F07_15260;Dbxref=NCBI_GP:TGD71491.1;Name=TGD71491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218755.1;locus_tag=C9F07_15260;product=phosphatase;protein_id=TGD71491.1;transl_table=11 PYKI01001598.1 Genbank gene 802 1280 . + . ID=gene-C9F07_15265;Name=C9F07_15265;end_range=1280,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15265;partial=true PYKI01001598.1 Protein Homology CDS 802 1280 . + 0 ID=cds-TGD71490.1;Parent=gene-C9F07_15265;Dbxref=NCBI_GP:TGD71490.1;Name=TGD71490.1;end_range=1280,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=C9F07_15265;partial=true;product=threonylcarbamoyl-AMP synthase;protein_id=TGD71490.1;transl_table=11 ##sequence-region PYKI01001972.1 1 1279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001972.1 Genbank region 1 1279 . + . ID=PYKI01001972.1:1..1279;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001972.1 Genbank gene 1 1279 . - . ID=gene-C9F07_19015;Name=C9F07_19015;end_range=1279,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19015;partial=true;start_range=.,1 PYKI01001972.1 Protein Homology CDS 1 1279 . - 1 ID=cds-TGD60300.1;Parent=gene-C9F07_19015;Dbxref=NCBI_GP:TGD60300.1;Name=TGD60300.1;end_range=1279,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456547.1;locus_tag=C9F07_19015;partial=true;product=cellulose biosynthesis regulator YedQ;protein_id=TGD60300.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002935.1 1 1278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002935.1 Genbank region 1 1278 . + . ID=PYKI01002935.1:1..1278;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002935.1 Genbank gene 1 119 . - . ID=gene-C9F07_29395;Name=C9F07_29395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29395;partial=true;start_range=.,1 PYKI01002935.1 Protein Homology CDS 1 119 . - 0 ID=cds-TGD42805.1;Parent=gene-C9F07_29395;Dbxref=NCBI_GP:TGD42805.1;Name=TGD42805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=C9F07_29395;partial=true;product=D-galactarate dehydratase;protein_id=TGD42805.1;start_range=.,1;transl_table=11 PYKI01002935.1 Genbank gene 356 1278 . + . ID=gene-C9F07_29400;Name=leuS;end_range=1278,.;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=C9F07_29400;partial=true PYKI01002935.1 Protein Homology CDS 356 1278 . + 0 ID=cds-TGD42804.1;Parent=gene-C9F07_29400;Dbxref=NCBI_GP:TGD42804.1;Name=TGD42804.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;end_range=1278,.;gbkey=CDS;gene=leuS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459640.1;locus_tag=C9F07_29400;partial=true;product=leucine--tRNA ligase;protein_id=TGD42804.1;transl_table=11 ##sequence-region PYKI01003205.1 1 1277 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003205.1 Genbank region 1 1277 . + . ID=PYKI01003205.1:1..1277;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003205.1 Genbank gene 328 498 . + . ID=gene-C9F07_32225;Name=C9F07_32225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32225 PYKI01003205.1 Protein Homology CDS 328 498 . + 0 ID=cds-TGD37176.1;Parent=gene-C9F07_32225;Dbxref=NCBI_GP:TGD37176.1;Name=TGD37176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455589.1;locus_tag=C9F07_32225;product=DUF3950 domain-containing protein;protein_id=TGD37176.1;transl_table=11 PYKI01003205.1 Genbank gene 499 609 . - . ID=gene-C9F07_32230;Name=C9F07_32230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32230 PYKI01003205.1 Protein Homology CDS 499 609 . - 0 ID=cds-TGD37177.1;Parent=gene-C9F07_32230;Dbxref=NCBI_GP:TGD37177.1;Name=TGD37177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=C9F07_32230;product=hypothetical protein;protein_id=TGD37177.1;transl_table=11 PYKI01003205.1 Genbank gene 718 1277 . - . ID=gene-C9F07_32235;Name=C9F07_32235;end_range=1277,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32235;partial=true PYKI01003205.1 Protein Homology CDS 718 1277 . - 2 ID=cds-TGD37178.1;Parent=gene-C9F07_32235;Dbxref=NCBI_GP:TGD37178.1;Name=TGD37178.1;end_range=1277,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=C9F07_32235;partial=true;product=dipeptidase;protein_id=TGD37178.1;transl_table=11 ##sequence-region PYKI01003135.1 1 1277 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003135.1 Genbank region 1 1277 . + . ID=PYKI01003135.1:1..1277;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003135.1 Genbank gene 1 513 . - . ID=gene-C9F07_31400;Name=C9F07_31400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31400;partial=true;start_range=.,1 PYKI01003135.1 Protein Homology CDS 1 513 . - 0 ID=cds-TGD38932.1;Parent=gene-C9F07_31400;Dbxref=NCBI_GP:TGD38932.1;Name=TGD38932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454927.1;locus_tag=C9F07_31400;partial=true;product=peptide chain release factor H;protein_id=TGD38932.1;start_range=.,1;transl_table=11 PYKI01003135.1 Genbank gene 459 1277 . - . ID=gene-C9F07_31405;Name=C9F07_31405;end_range=1277,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31405;partial=true PYKI01003135.1 Protein Homology CDS 459 1277 . - 0 ID=cds-TGD38931.1;Parent=gene-C9F07_31405;Dbxref=NCBI_GP:TGD38931.1;Name=TGD38931.1;end_range=1277,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454926.1;locus_tag=C9F07_31405;partial=true;product=RNA ligase RtcB family protein;protein_id=TGD38931.1;transl_table=11 ##sequence-region PYKI01000314.1 1 1275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000314.1 Genbank region 1 1275 . + . ID=PYKI01000314.1:1..1275;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000314.1 Genbank gene 1 680 . + . ID=gene-C9F07_02145;Name=C9F07_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02145;partial=true;start_range=.,1 PYKI01000314.1 Protein Homology CDS 1 680 . + 2 ID=cds-TGE27770.1;Parent=gene-C9F07_02145;Dbxref=NCBI_GP:TGE27770.1;Name=TGE27770.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%3B catalyzes the phosphorylation of maltose and glucose concomitant with their translocation across the cell membrane%3B component IIB catalyzes the phosphorylation of the sugar molecule%3B IIC forms the translocation channel and contains the substrate specific binding site;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002412640.1;locus_tag=C9F07_02145;partial=true;product=PTS sugar transporter subunit IIBC;protein_id=TGE27770.1;start_range=.,1;transl_table=11 PYKI01000314.1 Genbank gene 690 1275 . + . ID=gene-C9F07_02150;Name=C9F07_02150;end_range=1275,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02150;partial=true PYKI01000314.1 Protein Homology CDS 690 1275 . + 0 ID=cds-TGE27769.1;Parent=gene-C9F07_02150;Dbxref=NCBI_GP:TGE27769.1;Name=TGE27769.1;Note=catalyzes the formation of homocysteine and pyruvate from cystathionine%3B also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT;end_range=1275,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310357.1;locus_tag=C9F07_02150;partial=true;product=transcriptional regulator;protein_id=TGE27769.1;transl_table=11 ##sequence-region PYKI01002137.1 1 1275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002137.1 Genbank region 1 1275 . + . ID=PYKI01002137.1:1..1275;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002137.1 Genbank gene 1 476 . + . ID=gene-C9F07_20705;Name=C9F07_20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20705;partial=true;start_range=.,1 PYKI01002137.1 Protein Homology CDS 1 476 . + 2 ID=cds-TGD57826.1;Parent=gene-C9F07_20705;Dbxref=NCBI_GP:TGD57826.1;Name=TGD57826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000220587.1;locus_tag=C9F07_20705;partial=true;product=hypothetical protein;protein_id=TGD57826.1;start_range=.,1;transl_table=11 PYKI01002137.1 Genbank gene 463 1275 . + . ID=gene-C9F07_20710;Name=C9F07_20710;end_range=1275,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20710;partial=true PYKI01002137.1 Protein Homology CDS 463 1275 . + 0 ID=cds-TGD57827.1;Parent=gene-C9F07_20710;Dbxref=NCBI_GP:TGD57827.1;Name=TGD57827.1;end_range=1275,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000050078.1;locus_tag=C9F07_20710;partial=true;product=replication protein;protein_id=TGD57827.1;transl_table=11 ##sequence-region PYKI01002268.1 1 1273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002268.1 Genbank region 1 1273 . + . ID=PYKI01002268.1:1..1273;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002268.1 Genbank gene 1 1273 . + . ID=gene-C9F07_22200;Name=ttrS;end_range=1273,.;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=C9F07_22200;partial=true;start_range=.,1 PYKI01002268.1 Protein Homology CDS 1 1273 . + 2 ID=cds-TGD55206.1;Parent=gene-C9F07_22200;Dbxref=NCBI_GP:TGD55206.1;Name=TGD55206.1;end_range=1273,.;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=C9F07_22200;partial=true;product=two-component system sensor histidine kinase TtrS;protein_id=TGD55206.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000583.1 1 1273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000583.1 Genbank region 1 1273 . + . ID=PYKI01000583.1:1..1273;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000583.1 Genbank gene 1 163 . + . ID=gene-C9F07_04935;Name=C9F07_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04935;partial=true;start_range=.,1 PYKI01000583.1 Protein Homology CDS 1 163 . + 1 ID=cds-TGE14367.1;Parent=gene-C9F07_04935;Dbxref=NCBI_GP:TGE14367.1;Name=TGE14367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=C9F07_04935;partial=true;product=DNA-binding protein YbiB;protein_id=TGE14367.1;start_range=.,1;transl_table=11 PYKI01000583.1 Genbank gene 319 579 . - . ID=gene-C9F07_04940;Name=C9F07_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04940 PYKI01000583.1 Protein Homology CDS 319 579 . - 0 ID=cds-TGE14368.1;Parent=gene-C9F07_04940;Dbxref=NCBI_GP:TGE14368.1;Name=TGE14368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455359.1;locus_tag=C9F07_04940;product=DUF1471 domain-containing protein;protein_id=TGE14368.1;transl_table=11 PYKI01000583.1 Genbank gene 864 1130 . - . ID=gene-C9F07_04945;Name=C9F07_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04945 PYKI01000583.1 Protein Homology CDS 864 1130 . - 0 ID=cds-TGE14369.1;Parent=gene-C9F07_04945;Dbxref=NCBI_GP:TGE14369.1;Name=TGE14369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455361.1;locus_tag=C9F07_04945;product=DksA/TraR family C4-type zinc finger protein;protein_id=TGE14369.1;transl_table=11 ##sequence-region PYKI01003219.1 1 1271 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003219.1 Genbank region 1 1271 . + . ID=PYKI01003219.1:1..1271;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003219.1 Genbank gene 1 829 . - . ID=gene-C9F07_32400;Name=C9F07_32400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32400;partial=true;start_range=.,1 PYKI01003219.1 Protein Homology CDS 1 829 . - 0 ID=cds-TGD36794.1;Parent=gene-C9F07_32400;Dbxref=NCBI_GP:TGD36794.1;Name=TGD36794.1;Note=exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=C9F07_32400;partial=true;product=ATP-dependent RNA helicase DbpA;protein_id=TGD36794.1;start_range=.,1;transl_table=11 PYKI01003219.1 Genbank gene 858 1040 . - . ID=gene-C9F07_32405;Name=C9F07_32405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32405 PYKI01003219.1 Protein Homology CDS 858 1040 . - 0 ID=cds-TGD36795.1;Parent=gene-C9F07_32405;Dbxref=NCBI_GP:TGD36795.1;Name=TGD36795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670836.1;locus_tag=C9F07_32405;product=hypothetical protein;protein_id=TGD36795.1;transl_table=11 ##sequence-region PYKI01002239.1 1 1269 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002239.1 Genbank region 1 1269 . + . ID=PYKI01002239.1:1..1269;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002239.1 Genbank gene 1 1269 . + . ID=gene-C9F07_21885;Name=C9F07_21885;end_range=1269,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21885;partial=true;start_range=.,1 PYKI01002239.1 Protein Homology CDS 1 1269 . + 2 ID=cds-TGD55974.1;Parent=gene-C9F07_21885;Dbxref=NCBI_GP:TGD55974.1;Name=TGD55974.1;end_range=1269,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838138.1;locus_tag=C9F07_21885;partial=true;product=phage terminase small subunit P27 family;protein_id=TGD55974.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003462.1 1 1269 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003462.1 Genbank region 1 1269 . + . ID=PYKI01003462.1:1..1269;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003462.1 Genbank pseudogene 1 804 . + . ID=gene-C9F07_34805;Name=C9F07_34805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34805;pseudo=true PYKI01003462.1 Protein Homology CDS 1 804 . + 0 ID=cds-C9F07_34805;Parent=gene-C9F07_34805;Note=catalyzes the formation of 4-aminobutyraldehyde from putrescine and 2-oxoglutarate%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462132.3;locus_tag=C9F07_34805;product=putrescine aminotransferase;pseudo=true;transl_table=11 PYKI01003462.1 Genbank pseudogene 975 1166 . + . ID=gene-C9F07_34810;Name=C9F07_34810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34810;pseudo=true PYKI01003462.1 Protein Homology CDS 975 1166 . + 0 ID=cds-C9F07_34810;Parent=gene-C9F07_34810;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=C9F07_34810;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002788.1 1 1268 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002788.1 Genbank region 1 1268 . + . ID=PYKI01002788.1:1..1268;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002788.1 Genbank gene 1 1268 . + . ID=gene-C9F07_27870;Name=C9F07_27870;end_range=1268,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27870;partial=true;start_range=.,1 PYKI01002788.1 Protein Homology CDS 1 1268 . + 1 ID=cds-TGD46133.1;Parent=gene-C9F07_27870;Dbxref=NCBI_GP:TGD46133.1;Name=TGD46133.1;end_range=1268,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=C9F07_27870;partial=true;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=TGD46133.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002708.1 1 1268 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002708.1 Genbank region 1 1268 . + . ID=PYKI01002708.1:1..1268;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002708.1 Genbank pseudogene 1 1268 . + . ID=gene-C9F07_27010;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=pseudogene;locus_tag=C9F07_27010;pseudo=true PYKI01002708.1 Protein Homology CDS 1 1268 . + 1 ID=cds-C9F07_27010;Parent=gene-C9F07_27010;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455644.1;locus_tag=C9F07_27010;product=glucans biosynthesis protein MdoG;pseudo=true;transl_table=11 ##sequence-region PYKI01002224.1 1 1266 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002224.1 Genbank region 1 1266 . + . ID=PYKI01002224.1:1..1266;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002224.1 Genbank gene 1 439 . + . ID=gene-C9F07_21685;Name=C9F07_21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21685;partial=true;start_range=.,1 PYKI01002224.1 Protein Homology CDS 1 439 . + 1 ID=cds-TGD56209.1;Parent=gene-C9F07_21685;Dbxref=NCBI_GP:TGD56209.1;Name=TGD56209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=C9F07_21685;partial=true;product=ROK family protein;protein_id=TGD56209.1;start_range=.,1;transl_table=11 PYKI01002224.1 Genbank gene 723 1266 . - . ID=gene-C9F07_21690;Name=C9F07_21690;end_range=1266,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21690;partial=true PYKI01002224.1 Protein Homology CDS 723 1266 . - 1 ID=cds-TGD56210.1;Parent=gene-C9F07_21690;Dbxref=NCBI_GP:TGD56210.1;Name=TGD56210.1;end_range=1266,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=C9F07_21690;partial=true;product=selenocysteinyl-tRNA-specific translation elongation factor SelB;protein_id=TGD56210.1;transl_table=11 ##sequence-region PYKI01003222.1 1 1264 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003222.1 Genbank region 1 1264 . + . ID=PYKI01003222.1:1..1264;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003222.1 Genbank pseudogene 62 517 . + . ID=gene-C9F07_32435;Name=C9F07_32435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32435;pseudo=true PYKI01003222.1 Protein Homology CDS 62 517 . + 0 ID=cds-C9F07_32435;Parent=gene-C9F07_32435;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459834.1;locus_tag=C9F07_32435;product=acyl-CoA dehydrogenase;pseudo=true;transl_table=11 PYKI01003222.1 Genbank gene 966 1264 . + . ID=gene-C9F07_32440;Name=C9F07_32440;end_range=1264,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32440;partial=true PYKI01003222.1 Protein Homology CDS 966 1264 . + 0 ID=cds-TGD36735.1;Parent=gene-C9F07_32440;Dbxref=NCBI_GP:TGD36735.1;Name=TGD36735.1;end_range=1264,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459835.1;locus_tag=C9F07_32440;partial=true;product=hypothetical protein;protein_id=TGD36735.1;transl_table=11 ##sequence-region PYKI01000784.1 1 1264 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000784.1 Genbank region 1 1264 . + . ID=PYKI01000784.1:1..1264;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000784.1 Genbank gene 82 678 . + . ID=gene-C9F07_07075;Name=C9F07_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07075 PYKI01000784.1 Protein Homology CDS 82 678 . + 0 ID=cds-TGE09162.1;Parent=gene-C9F07_07075;Dbxref=NCBI_GP:TGE09162.1;Name=TGE09162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=C9F07_07075;product=nucleoid occlusion factor SlmA;protein_id=TGE09162.1;transl_table=11 PYKI01000784.1 Genbank gene 756 1264 . - . ID=gene-C9F07_07080;Name=C9F07_07080;end_range=1264,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07080;partial=true PYKI01000784.1 Protein Homology CDS 756 1264 . - 2 ID=cds-TGE09163.1;Parent=gene-C9F07_07080;Dbxref=NCBI_GP:TGE09163.1;Name=TGE09163.1;end_range=1264,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=C9F07_07080;partial=true;product=orotate phosphoribosyltransferase;protein_id=TGE09163.1;transl_table=11 ##sequence-region PYKI01001279.1 1 1263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001279.1 Genbank region 1 1263 . + . ID=PYKI01001279.1:1..1263;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001279.1 Genbank gene 79 261 . + . ID=gene-C9F07_11990;Name=C9F07_11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11990 PYKI01001279.1 Protein Homology CDS 79 261 . + 0 ID=cds-TGD87782.1;Parent=gene-C9F07_11990;Dbxref=NCBI_GP:TGD87782.1;Name=TGD87782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=C9F07_11990;product=molybdopterin-binding protein;protein_id=TGD87782.1;transl_table=11 PYKI01001279.1 Genbank gene 295 447 . - . ID=gene-C9F07_11995;Name=C9F07_11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11995 PYKI01001279.1 Protein Homology CDS 295 447 . - 0 ID=cds-TGD87781.1;Parent=gene-C9F07_11995;Dbxref=NCBI_GP:TGD87781.1;Name=TGD87781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219073.1;locus_tag=C9F07_11995;product=DNA metabolism protein;protein_id=TGD87781.1;transl_table=11 PYKI01001279.1 Genbank gene 495 1112 . - . ID=gene-C9F07_12000;Name=C9F07_12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12000 PYKI01001279.1 Protein Homology CDS 495 1112 . - 0 ID=cds-TGD87783.1;Parent=gene-C9F07_12000;Dbxref=NCBI_GP:TGD87783.1;Name=TGD87783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502765.1;locus_tag=C9F07_12000;product=deubiquitinase SseL;protein_id=TGD87783.1;transl_table=11 ##sequence-region PYKI01001602.1 1 1263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001602.1 Genbank region 1 1263 . + . ID=PYKI01001602.1:1..1263;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001602.1 Genbank gene 1 920 . + . ID=gene-C9F07_15295;Name=C9F07_15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15295;partial=true;start_range=.,1 PYKI01001602.1 Protein Homology CDS 1 920 . + 2 ID=cds-TGD71432.1;Parent=gene-C9F07_15295;Dbxref=NCBI_GP:TGD71432.1;Name=TGD71432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460548.1;locus_tag=C9F07_15295;partial=true;product=NADP-dependent oxidoreductase;protein_id=TGD71432.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000624.1 1 4033 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000624.1 Genbank region 1 4033 . + . ID=PYKI01000624.1:1..4033;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000624.1 Genbank gene 1 188 . - . ID=gene-C9F07_05375;Name=C9F07_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05375;partial=true;start_range=.,1 PYKI01000624.1 Protein Homology CDS 1 188 . - 0 ID=cds-TGE13457.1;Parent=gene-C9F07_05375;Dbxref=NCBI_GP:TGE13457.1;Name=TGE13457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456226.1;locus_tag=C9F07_05375;partial=true;product=PrkA family serine protein kinase;protein_id=TGE13457.1;start_range=.,1;transl_table=11 PYKI01000624.1 Genbank gene 615 1361 . + . ID=gene-C9F07_05380;Name=C9F07_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05380 PYKI01000624.1 Protein Homology CDS 615 1361 . + 0 ID=cds-TGE13458.1;Parent=gene-C9F07_05380;Dbxref=NCBI_GP:TGE13458.1;Name=TGE13458.1;Note=scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456225.1;locus_tag=C9F07_05380;product=MipA/OmpV family protein;protein_id=TGE13458.1;transl_table=11 PYKI01000624.1 Genbank gene 1651 2847 . + . ID=gene-C9F07_05385;Name=C9F07_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05385 PYKI01000624.1 Protein Homology CDS 1651 2847 . + 0 ID=cds-TGE13459.1;Parent=gene-C9F07_05385;Dbxref=NCBI_GP:TGE13459.1;Name=TGE13459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=C9F07_05385;product=anaerobic sulfatase maturase;protein_id=TGE13459.1;transl_table=11 PYKI01000624.1 Genbank gene 2944 3801 . + . ID=gene-C9F07_05390;Name=C9F07_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05390 PYKI01000624.1 Protein Homology CDS 2944 3801 . + 0 ID=cds-TGE13460.1;Parent=gene-C9F07_05390;Dbxref=NCBI_GP:TGE13460.1;Name=TGE13460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=C9F07_05390;product=aldo/keto reductase;protein_id=TGE13460.1;transl_table=11 PYKI01000624.1 Genbank gene 3900 4033 . - . ID=gene-C9F07_05395;Name=C9F07_05395;end_range=4033,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05395;partial=true PYKI01000624.1 Protein Homology CDS 3900 4033 . - 2 ID=cds-TGE13461.1;Parent=gene-C9F07_05395;Dbxref=NCBI_GP:TGE13461.1;Name=TGE13461.1;end_range=4033,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=C9F07_05395;partial=true;product=D-hexose-6-phosphate mutarotase;protein_id=TGE13461.1;transl_table=11 ##sequence-region PYKI01002985.1 1 1260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002985.1 Genbank region 1 1260 . + . ID=PYKI01002985.1:1..1260;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002985.1 Genbank gene 1 192 . - . ID=gene-C9F07_29975;Name=C9F07_29975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29975;partial=true;start_range=.,1 PYKI01002985.1 Protein Homology CDS 1 192 . - 0 ID=cds-TGD41408.1;Parent=gene-C9F07_29975;Dbxref=NCBI_GP:TGD41408.1;Name=TGD41408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456257.1;locus_tag=C9F07_29975;partial=true;product=hypothetical protein;protein_id=TGD41408.1;start_range=.,1;transl_table=11 PYKI01002985.1 Genbank gene 341 655 . - . ID=gene-C9F07_29980;Name=C9F07_29980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29980 PYKI01002985.1 Protein Homology CDS 341 655 . - 0 ID=cds-TGD41409.1;Parent=gene-C9F07_29980;Dbxref=NCBI_GP:TGD41409.1;Name=TGD41409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456256.1;locus_tag=C9F07_29980;product=hypothetical protein;protein_id=TGD41409.1;transl_table=11 ##sequence-region PYKI01002220.1 1 1258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002220.1 Genbank region 1 1258 . + . ID=PYKI01002220.1:1..1258;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002220.1 Genbank gene 1 468 . - . ID=gene-C9F07_21645;Name=C9F07_21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21645;partial=true;start_range=.,1 PYKI01002220.1 Protein Homology CDS 1 468 . - 0 ID=cds-TGD56466.1;Parent=gene-C9F07_21645;Dbxref=NCBI_GP:TGD56466.1;Name=TGD56466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456725.1;locus_tag=C9F07_21645;partial=true;product=ABC transporter substrate-binding protein;protein_id=TGD56466.1;start_range=.,1;transl_table=11 PYKI01002220.1 Genbank pseudogene 649 1209 . - . ID=gene-C9F07_21650;Name=C9F07_21650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21650;pseudo=true PYKI01002220.1 Protein Homology CDS 649 1209 . - 0 ID=cds-C9F07_21650;Parent=gene-C9F07_21650;Note=catalyzes the hydrolysis of terminal beta-D-glucosyl residues%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=C9F07_21650;product=beta-glucosidase;pseudo=true;transl_table=11 ##sequence-region PYKI01002452.1 1 1256 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002452.1 Genbank region 1 1256 . + . ID=PYKI01002452.1:1..1256;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002452.1 Genbank gene 1 119 . - . ID=gene-C9F07_24225;Name=C9F07_24225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24225;partial=true;start_range=.,1 PYKI01002452.1 Protein Homology CDS 1 119 . - 0 ID=cds-TGD50882.1;Parent=gene-C9F07_24225;Dbxref=NCBI_GP:TGD50882.1;Name=TGD50882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=C9F07_24225;partial=true;product=crotonobetaine/carnitine-CoA ligase;protein_id=TGD50882.1;start_range=.,1;transl_table=11 PYKI01002452.1 Genbank gene 182 1256 . - . ID=gene-C9F07_24230;Name=C9F07_24230;end_range=1256,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24230;partial=true PYKI01002452.1 Protein Homology CDS 182 1256 . - 1 ID=cds-TGD50883.1;Parent=gene-C9F07_24230;Dbxref=NCBI_GP:TGD50883.1;Name=TGD50883.1;end_range=1256,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454682.1;locus_tag=C9F07_24230;partial=true;product=L-carnitine CoA-transferase;protein_id=TGD50883.1;transl_table=11 ##sequence-region PYKI01002926.1 1 1256 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002926.1 Genbank region 1 1256 . + . ID=PYKI01002926.1:1..1256;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002926.1 Genbank gene 1 1256 . - . ID=gene-C9F07_29330;Name=cadA;end_range=1256,.;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=C9F07_29330;partial=true;start_range=.,1 PYKI01002926.1 Protein Homology CDS 1 1256 . - 0 ID=cds-TGD43092.1;Parent=gene-C9F07_29330;Dbxref=NCBI_GP:TGD43092.1;Name=TGD43092.1;end_range=1256,.;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458345.1;locus_tag=C9F07_29330;partial=true;product=cadmium-translocating P-type ATPase;protein_id=TGD43092.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002594.1 1 1256 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002594.1 Genbank region 1 1256 . + . ID=PYKI01002594.1:1..1256;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002594.1 Genbank gene 1 824 . + . ID=gene-C9F07_25755;Name=C9F07_25755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25755;partial=true;start_range=.,1 PYKI01002594.1 Protein Homology CDS 1 824 . + 2 ID=cds-TGD49660.1;Parent=gene-C9F07_25755;Dbxref=NCBI_GP:TGD49660.1;Name=TGD49660.1;Note=YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457782.1;locus_tag=C9F07_25755;partial=true;product=DNA recombination protein RmuC;protein_id=TGD49660.1;start_range=.,1;transl_table=11 PYKI01002594.1 Genbank gene 920 1256 . + . ID=gene-C9F07_25760;Name=ubiE;end_range=1256,.;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=C9F07_25760;partial=true PYKI01002594.1 Protein Homology CDS 920 1256 . + 0 ID=cds-TGD49661.1;Parent=gene-C9F07_25760;Dbxref=NCBI_GP:TGD49661.1;Name=TGD49661.1;Note=Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone;end_range=1256,.;gbkey=CDS;gene=ubiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457781.1;locus_tag=C9F07_25760;partial=true;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase;protein_id=TGD49661.1;transl_table=11 ##sequence-region PYKI01002733.1 1 1255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002733.1 Genbank region 1 1255 . + . ID=PYKI01002733.1:1..1255;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002733.1 Genbank gene 1 613 . + . ID=gene-C9F07_27265;Name=C9F07_27265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27265;partial=true;start_range=.,1 PYKI01002733.1 Protein Homology CDS 1 613 . + 1 ID=cds-TGD47265.1;Parent=gene-C9F07_27265;Dbxref=NCBI_GP:TGD47265.1;Name=TGD47265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=C9F07_27265;partial=true;product=hypothetical protein;protein_id=TGD47265.1;start_range=.,1;transl_table=11 PYKI01002733.1 Genbank gene 729 1255 . + . ID=gene-C9F07_27270;Name=C9F07_27270;end_range=1255,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27270;partial=true PYKI01002733.1 Protein Homology CDS 729 1255 . + 0 ID=cds-TGD47266.1;Parent=gene-C9F07_27270;Dbxref=NCBI_GP:TGD47266.1;Name=TGD47266.1;end_range=1255,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456696.1;locus_tag=C9F07_27270;partial=true;product=hypothetical protein;protein_id=TGD47266.1;transl_table=11 ##sequence-region PYKI01003080.1 1 1253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003080.1 Genbank region 1 1253 . + . ID=PYKI01003080.1:1..1253;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003080.1 Genbank gene 1 1212 . - . ID=gene-C9F07_30855;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=C9F07_30855;partial=true;start_range=.,1 PYKI01003080.1 Protein Homology CDS 1 1212 . - 0 ID=cds-TGD40415.1;Parent=gene-C9F07_30855;Dbxref=NCBI_GP:TGD40415.1;Name=TGD40415.1;gbkey=CDS;gene=glgX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=C9F07_30855;partial=true;product=glycogen debranching enzyme GlgX;protein_id=TGD40415.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000791.1 1 1253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000791.1 Genbank region 1 1253 . + . ID=PYKI01000791.1:1..1253;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000791.1 Genbank gene 334 1107 . - . ID=gene-C9F07_07115;Name=C9F07_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07115 PYKI01000791.1 Protein Homology CDS 334 1107 . - 0 ID=cds-TGE09155.1;Parent=gene-C9F07_07115;Dbxref=NCBI_GP:TGE09155.1;Name=TGE09155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457646.1;locus_tag=C9F07_07115;product=transcriptional regulator;protein_id=TGE09155.1;transl_table=11 ##sequence-region PYKI01003296.1 1 1252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003296.1 Genbank region 1 1252 . + . ID=PYKI01003296.1:1..1252;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003296.1 Genbank pseudogene 57 827 . - . ID=gene-C9F07_33140;Name=C9F07_33140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33140;pseudo=true PYKI01003296.1 Protein Homology CDS 57 827 . - 0 ID=cds-C9F07_33140;Parent=gene-C9F07_33140;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=C9F07_33140;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01003296.1 Genbank gene 1027 1252 . - . ID=gene-C9F07_33145;Name=C9F07_33145;end_range=1252,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33145;partial=true PYKI01003296.1 Protein Homology CDS 1027 1252 . - 1 ID=cds-TGD36067.1;Parent=gene-C9F07_33145;Dbxref=NCBI_GP:TGD36067.1;Name=TGD36067.1;Note=Catalyzes a key regulatory step in fatty acid biosynthesis;end_range=1252,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=C9F07_33145;partial=true;product=enoyl-[acyl-carrier-protein] reductase FabI;protein_id=TGD36067.1;transl_table=11 ##sequence-region PYKI01002936.1 1 1250 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002936.1 Genbank region 1 1250 . + . ID=PYKI01002936.1:1..1250;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002936.1 Genbank gene 32 496 . + . ID=gene-C9F07_29405;Name=C9F07_29405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29405 PYKI01002936.1 Protein Homology CDS 32 496 . + 0 ID=cds-TGD42798.1;Parent=gene-C9F07_29405;Dbxref=NCBI_GP:TGD42798.1;Name=TGD42798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461646.1;locus_tag=C9F07_29405;product=head completion/stabilization protein;protein_id=TGD42798.1;transl_table=11 PYKI01002936.1 Genbank gene 496 699 . + . ID=gene-C9F07_29410;Name=C9F07_29410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29410 PYKI01002936.1 Protein Homology CDS 496 699 . + 0 ID=cds-TGD42799.1;Parent=gene-C9F07_29410;Dbxref=NCBI_GP:TGD42799.1;Name=TGD42799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457871.1;locus_tag=C9F07_29410;product=phage tail protein;protein_id=TGD42799.1;transl_table=11 PYKI01002936.1 Genbank gene 703 918 . + . ID=gene-C9F07_29415;Name=C9F07_29415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29415 PYKI01002936.1 Protein Homology CDS 703 918 . + 0 ID=cds-TGD42800.1;Parent=gene-C9F07_29415;Dbxref=NCBI_GP:TGD42800.1;Name=TGD42800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461644.1;locus_tag=C9F07_29415;product=hypothetical protein;protein_id=TGD42800.1;transl_table=11 PYKI01002936.1 Genbank pseudogene 899 1186 . + . ID=gene-C9F07_29420;Name=C9F07_29420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29420;pseudo=true PYKI01002936.1 Protein Homology CDS 899 1186 . + 0 ID=cds-C9F07_29420;Parent=gene-C9F07_29420;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461643.3;locus_tag=C9F07_29420;product=glycoside hydrolase;pseudo=true;transl_table=11 ##sequence-region PYKI01001951.1 1 4021 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001951.1 Genbank region 1 4021 . + . ID=PYKI01001951.1:1..4021;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001951.1 Genbank gene 1 723 . + . ID=gene-C9F07_18810;Name=C9F07_18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18810;partial=true;start_range=.,1 PYKI01001951.1 Protein Homology CDS 1 723 . + 0 ID=cds-TGD60503.1;Parent=gene-C9F07_18810;Dbxref=NCBI_GP:TGD60503.1;Name=TGD60503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454744.1;locus_tag=C9F07_18810;partial=true;product=cell division protein FtsA;protein_id=TGD60503.1;start_range=.,1;transl_table=11 PYKI01001951.1 Genbank gene 785 1936 . + . ID=gene-C9F07_18815;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=C9F07_18815 PYKI01001951.1 Protein Homology CDS 785 1936 . + 0 ID=cds-TGD60504.1;Parent=gene-C9F07_18815;Dbxref=NCBI_GP:TGD60504.1;Name=TGD60504.1;gbkey=CDS;gene=ftsZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=C9F07_18815;product=cell division protein FtsZ;protein_id=TGD60504.1;transl_table=11 PYKI01001951.1 Genbank gene 2037 2954 . + . ID=gene-C9F07_18820;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=C9F07_18820 PYKI01001951.1 Protein Homology CDS 2037 2954 . + 0 ID=cds-TGD60505.1;Parent=gene-C9F07_18820;Dbxref=NCBI_GP:TGD60505.1;Name=TGD60505.1;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis;gbkey=CDS;gene=lpxC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595491.1;locus_tag=C9F07_18820;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=TGD60505.1;transl_table=11 PYKI01001951.1 Genbank gene 3233 3730 . + . ID=gene-C9F07_18825;Name=C9F07_18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18825 PYKI01001951.1 Protein Homology CDS 3233 3730 . + 0 ID=cds-TGD60506.1;Parent=gene-C9F07_18825;Dbxref=NCBI_GP:TGD60506.1;Name=TGD60506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124640.1;locus_tag=C9F07_18825;product=SecA regulator SecM;protein_id=TGD60506.1;transl_table=11 PYKI01001951.1 Genbank pseudogene 3792 3971 . + . ID=gene-C9F07_18830;Name=C9F07_18830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18830;pseudo=true PYKI01001951.1 Protein Homology CDS 3792 3971 . + 0 ID=cds-C9F07_18830;Parent=gene-C9F07_18830;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015704405.1;locus_tag=C9F07_18830;product=preprotein translocase subunit SecA;pseudo=true;transl_table=11 ##sequence-region PYKI01000823.1 1 7884 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000823.1 Genbank region 1 7884 . + . ID=PYKI01000823.1:1..7884;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000823.1 Genbank pseudogene 76 1704 . - . ID=gene-C9F07_07475;Name=C9F07_07475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07475;pseudo=true PYKI01000823.1 Protein Homology CDS 76 1704 . - 0 ID=cds-C9F07_07475;Parent=gene-C9F07_07475;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458031.1;locus_tag=C9F07_07475;product=alpha-glucosidase;pseudo=true;transl_table=11 PYKI01000823.1 Genbank gene 1748 2605 . - . ID=gene-C9F07_07480;Name=C9F07_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07480 PYKI01000823.1 Protein Homology CDS 1748 2605 . - 0 ID=cds-TGE07357.1;Parent=gene-C9F07_07480;Dbxref=NCBI_GP:TGE07357.1;Name=TGE07357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462900.3;locus_tag=C9F07_07480;product=aldose-1-epimerase;protein_id=TGE07357.1;transl_table=11 PYKI01000823.1 Genbank gene 2609 3850 . - . ID=gene-C9F07_07485;Name=C9F07_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07485 PYKI01000823.1 Protein Homology CDS 2609 3850 . - 0 ID=cds-TGE07358.1;Parent=gene-C9F07_07485;Dbxref=NCBI_GP:TGE07358.1;Name=TGE07358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462901.1;locus_tag=C9F07_07485;product=sulfoquinovose isomerase;protein_id=TGE07358.1;transl_table=11 PYKI01000823.1 Genbank gene 3866 4744 . - . ID=gene-C9F07_07490;Name=C9F07_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07490 PYKI01000823.1 Protein Homology CDS 3866 4744 . - 0 ID=cds-TGE07359.1;Parent=gene-C9F07_07490;Dbxref=NCBI_GP:TGE07359.1;Name=TGE07359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458029.1;locus_tag=C9F07_07490;product=sulfofructosephosphate aldolase;protein_id=TGE07359.1;transl_table=11 PYKI01000823.1 Genbank gene 4767 5663 . - . ID=gene-C9F07_07495;Name=C9F07_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07495 PYKI01000823.1 Protein Homology CDS 4767 5663 . - 0 ID=cds-TGE07360.1;Parent=gene-C9F07_07495;Dbxref=NCBI_GP:TGE07360.1;Name=TGE07360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=C9F07_07495;product=sulfolactaldehyde 3-reductase;protein_id=TGE07360.1;transl_table=11 PYKI01000823.1 Genbank gene 5829 6725 . + . ID=gene-C9F07_07500;Name=C9F07_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07500 PYKI01000823.1 Protein Homology CDS 5829 6725 . + 0 ID=cds-TGE07361.1;Parent=gene-C9F07_07500;Dbxref=NCBI_GP:TGE07361.1;Name=TGE07361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458027.1;locus_tag=C9F07_07500;product=sugar kinase;protein_id=TGE07361.1;transl_table=11 PYKI01000823.1 Genbank gene 6759 7562 . + . ID=gene-C9F07_07505;Name=C9F07_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07505 PYKI01000823.1 Protein Homology CDS 6759 7562 . + 0 ID=cds-TGE07362.1;Parent=gene-C9F07_07505;Dbxref=NCBI_GP:TGE07362.1;Name=TGE07362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=C9F07_07505;product=DeoR/GlpR transcriptional regulator;protein_id=TGE07362.1;transl_table=11 PYKI01000823.1 Genbank gene 7753 7884 . + . ID=gene-C9F07_07510;Name=C9F07_07510;end_range=7884,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07510;partial=true PYKI01000823.1 Protein Homology CDS 7753 7884 . + 0 ID=cds-TGE07363.1;Parent=gene-C9F07_07510;Dbxref=NCBI_GP:TGE07363.1;Name=TGE07363.1;end_range=7884,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458025.1;locus_tag=C9F07_07510;partial=true;product=glucose-1-phosphatase;protein_id=TGE07363.1;transl_table=11 ##sequence-region PYKI01003286.1 1 1249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003286.1 Genbank region 1 1249 . + . ID=PYKI01003286.1:1..1249;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003286.1 Genbank gene 1 241 . - . ID=gene-C9F07_33055;Name=C9F07_33055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33055;partial=true;start_range=.,1 PYKI01003286.1 Protein Homology CDS 1 241 . - 0 ID=cds-TGD36120.1;Parent=gene-C9F07_33055;Dbxref=NCBI_GP:TGD36120.1;Name=TGD36120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456187.1;locus_tag=C9F07_33055;partial=true;product=hypothetical protein;protein_id=TGD36120.1;start_range=.,1;transl_table=11 PYKI01003286.1 Genbank gene 348 638 . - . ID=gene-C9F07_33060;Name=C9F07_33060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33060 PYKI01003286.1 Protein Homology CDS 348 638 . - 0 ID=cds-TGD36121.1;Parent=gene-C9F07_33060;Dbxref=NCBI_GP:TGD36121.1;Name=TGD36121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456186.1;locus_tag=C9F07_33060;product=endoribonuclease GhoS;protein_id=TGD36121.1;transl_table=11 PYKI01003286.1 Genbank gene 735 1249 . - . ID=gene-C9F07_33065;Name=C9F07_33065;end_range=1249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33065;partial=true PYKI01003286.1 Protein Homology CDS 735 1249 . - 2 ID=cds-TGD36122.1;Parent=gene-C9F07_33065;Dbxref=NCBI_GP:TGD36122.1;Name=TGD36122.1;end_range=1249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=C9F07_33065;partial=true;product=6-phosphofructokinase II;protein_id=TGD36122.1;transl_table=11 ##sequence-region PYKI01000413.1 1 1249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000413.1 Genbank region 1 1249 . + . ID=PYKI01000413.1:1..1249;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000413.1 Genbank gene 1 401 . - . ID=gene-C9F07_03170;Name=C9F07_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03170;partial=true;start_range=.,1 PYKI01000413.1 Protein Homology CDS 1 401 . - 0 ID=cds-TGE21027.1;Parent=gene-C9F07_03170;Dbxref=NCBI_GP:TGE21027.1;Name=TGE21027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455801.1;locus_tag=C9F07_03170;partial=true;product=peptide ABC transporter ATP-binding protein;protein_id=TGE21027.1;start_range=.,1;transl_table=11 PYKI01000413.1 Genbank pseudogene 401 1207 . - . ID=gene-C9F07_03175;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=pseudogene;locus_tag=C9F07_03175;pseudo=true PYKI01000413.1 Protein Homology CDS 401 1207 . - 0 ID=cds-C9F07_03175;Parent=gene-C9F07_03175;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838220.1;locus_tag=C9F07_03175;product=peptide ABC transporter permease SapC;pseudo=true;transl_table=11 ##sequence-region PYKI01000505.1 1 1249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000505.1 Genbank region 1 1249 . + . ID=PYKI01000505.1:1..1249;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000505.1 Genbank pseudogene 149 943 . + . ID=gene-C9F07_04120;Name=C9F07_04120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04120;pseudo=true PYKI01000505.1 Protein Homology CDS 149 943 . + 0 ID=cds-C9F07_04120;Parent=gene-C9F07_04120;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=C9F07_04120;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 PYKI01000505.1 Genbank gene 923 1249 . - . ID=gene-C9F07_04125;Name=C9F07_04125;end_range=1249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04125;partial=true PYKI01000505.1 Protein Homology CDS 923 1249 . - 0 ID=cds-TGE17133.1;Parent=gene-C9F07_04125;Dbxref=NCBI_GP:TGE17133.1;Name=TGE17133.1;end_range=1249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456229.1;locus_tag=C9F07_04125;partial=true;product=DUF441 domain-containing protein;protein_id=TGE17133.1;transl_table=11 ##sequence-region PYKI01001928.1 1 1249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001928.1 Genbank region 1 1249 . + . ID=PYKI01001928.1:1..1249;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001928.1 Genbank gene 1 913 . + . ID=gene-C9F07_18600;Name=C9F07_18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18600;partial=true;start_range=.,1 PYKI01001928.1 Protein Homology CDS 1 913 . + 1 ID=cds-TGD60858.1;Parent=gene-C9F07_18600;Dbxref=NCBI_GP:TGD60858.1;Name=TGD60858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=C9F07_18600;partial=true;product=carboxylesterase;protein_id=TGD60858.1;start_range=.,1;transl_table=11 PYKI01001928.1 Genbank gene 1133 1249 . + . ID=gene-C9F07_18605;Name=C9F07_18605;end_range=1249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18605;partial=true PYKI01001928.1 Protein Homology CDS 1133 1249 . + 0 ID=cds-TGD60859.1;Parent=gene-C9F07_18605;Dbxref=NCBI_GP:TGD60859.1;Name=TGD60859.1;end_range=1249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=C9F07_18605;partial=true;product=hypothetical protein;protein_id=TGD60859.1;transl_table=11 ##sequence-region PYKI01003038.1 1 1246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003038.1 Genbank region 1 1246 . + . ID=PYKI01003038.1:1..1246;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003038.1 Genbank gene 1 624 . - . ID=gene-C9F07_30500;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=C9F07_30500;partial=true;start_range=.,1 PYKI01003038.1 Protein Homology CDS 1 624 . - 0 ID=cds-TGD41053.1;Parent=gene-C9F07_30500;Dbxref=NCBI_GP:TGD41053.1;Name=TGD41053.1;gbkey=CDS;gene=coaBC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458196.3;locus_tag=C9F07_30500;partial=true;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=TGD41053.1;start_range=.,1;transl_table=11 PYKI01003038.1 Genbank gene 797 1246 . + . ID=gene-C9F07_30505;Name=C9F07_30505;end_range=1246,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30505;partial=true PYKI01003038.1 Protein Homology CDS 797 1246 . + 0 ID=cds-TGD41054.1;Parent=gene-C9F07_30505;Dbxref=NCBI_GP:TGD41054.1;Name=TGD41054.1;end_range=1246,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458197.1;locus_tag=C9F07_30505;partial=true;product=hypothetical protein;protein_id=TGD41054.1;transl_table=11 ##sequence-region PYKI01000420.1 1 1245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000420.1 Genbank region 1 1245 . + . ID=PYKI01000420.1:1..1245;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000420.1 Genbank pseudogene 100 894 . - . ID=gene-C9F07_03240;Name=C9F07_03240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03240;pseudo=true PYKI01000420.1 Protein Homology CDS 100 894 . - 0 ID=cds-C9F07_03240;Parent=gene-C9F07_03240;Note=catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418231.1;locus_tag=C9F07_03240;product=undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;pseudo=true;transl_table=11 PYKI01000420.1 Genbank gene 936 1139 . + . ID=gene-C9F07_03245;Name=C9F07_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03245 PYKI01000420.1 Protein Homology CDS 936 1139 . + 0 ID=cds-TGE20862.1;Parent=gene-C9F07_03245;Dbxref=NCBI_GP:TGE20862.1;Name=TGE20862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000846725.1;locus_tag=C9F07_03245;product=hypothetical protein;protein_id=TGE20862.1;transl_table=11 ##sequence-region PYKI01000371.1 1 1243 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000371.1 Genbank region 1 1243 . + . ID=PYKI01000371.1:1..1243;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000371.1 Genbank pseudogene 1 709 . + . ID=gene-C9F07_02810;Name=C9F07_02810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02810;pseudo=true PYKI01000371.1 Protein Homology CDS 1 709 . + 1 ID=cds-C9F07_02810;Parent=gene-C9F07_02810;Note=with LptBGC is involved in lipopolysaccharide export%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458896.1;locus_tag=C9F07_02810;product=LPS export ABC transporter permease LptF;pseudo=true;transl_table=11 PYKI01000371.1 Genbank gene 709 1243 . + . ID=gene-C9F07_02815;Name=C9F07_02815;end_range=1243,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02815;partial=true PYKI01000371.1 Protein Homology CDS 709 1243 . + 0 ID=cds-TGE23183.1;Parent=gene-C9F07_02815;Dbxref=NCBI_GP:TGE23183.1;Name=TGE23183.1;Note=with LptABCF is involved in the transport of lipopolysaccharides;end_range=1243,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458897.1;locus_tag=C9F07_02815;partial=true;product=lipopolysaccharide ABC transporter permease LptG;protein_id=TGE23183.1;transl_table=11 ##sequence-region PYKI01002836.1 1 1243 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002836.1 Genbank region 1 1243 . + . ID=PYKI01002836.1:1..1243;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002836.1 Genbank gene 100 981 . - . ID=gene-C9F07_28365;Name=C9F07_28365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28365 PYKI01002836.1 Protein Homology CDS 100 981 . - 0 ID=cds-TGD45579.1;Parent=gene-C9F07_28365;Dbxref=NCBI_GP:TGD45579.1;Name=TGD45579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=C9F07_28365;product=protease HtpX;protein_id=TGD45579.1;transl_table=11 ##sequence-region PYKI01000812.1 1 1242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000812.1 Genbank region 1 1242 . + . ID=PYKI01000812.1:1..1242;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000812.1 Genbank gene 1 361 . + . ID=gene-C9F07_07330;Name=C9F07_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07330;partial=true;start_range=.,1 PYKI01000812.1 Protein Homology CDS 1 361 . + 1 ID=cds-TGE07523.1;Parent=gene-C9F07_07330;Dbxref=NCBI_GP:TGE07523.1;Name=TGE07523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528247.1;locus_tag=C9F07_07330;partial=true;product=DUF4862 domain-containing protein;protein_id=TGE07523.1;start_range=.,1;transl_table=11 PYKI01000812.1 Genbank gene 500 973 . + . ID=gene-C9F07_07335;Name=C9F07_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07335 PYKI01000812.1 Protein Homology CDS 500 973 . + 0 ID=cds-TGE07524.1;Parent=gene-C9F07_07335;Dbxref=NCBI_GP:TGE07524.1;Name=TGE07524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458256.1;locus_tag=C9F07_07335;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=TGE07524.1;transl_table=11 PYKI01000812.1 Genbank gene 976 1242 . + . ID=gene-C9F07_07340;Name=C9F07_07340;end_range=1242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07340;partial=true PYKI01000812.1 Protein Homology CDS 976 1242 . + 0 ID=cds-TGE07525.1;Parent=gene-C9F07_07340;Dbxref=NCBI_GP:TGE07525.1;Name=TGE07525.1;Note=TRAP family transporter%3B with YiaMO is involved in the uptake of L-dehydroascorbate;end_range=1242,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458255.1;locus_tag=C9F07_07340;partial=true;product=L-dehydroascorbate transporter large permease subunit;protein_id=TGE07525.1;transl_table=11 ##sequence-region PYKI01001982.1 1 4010 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001982.1 Genbank region 1 4010 . + . ID=PYKI01001982.1:1..4010;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001982.1 Genbank gene 1 207 . - . ID=gene-C9F07_19090;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;gene_synonym=yicM;locus_tag=C9F07_19090;partial=true;start_range=.,1 PYKI01001982.1 Protein Homology CDS 1 207 . - 0 ID=cds-TGD60239.1;Parent=gene-C9F07_19090;Dbxref=NCBI_GP:TGD60239.1;Name=TGD60239.1;Note=experimental results in Escherichia coli suggest that this gene encodes an inosine export protein%3B member of major facilitator superfamily%3B MFS;gbkey=CDS;gene=nepI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458159.1;locus_tag=C9F07_19090;partial=true;product=MFS transporter;protein_id=TGD60239.1;start_range=.,1;transl_table=11 PYKI01001982.1 Genbank gene 472 780 . + . ID=gene-C9F07_19095;Name=C9F07_19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19095 PYKI01001982.1 Protein Homology CDS 472 780 . + 0 ID=cds-TGD60240.1;Parent=gene-C9F07_19095;Dbxref=NCBI_GP:TGD60240.1;Name=TGD60240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=C9F07_19095;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=TGD60240.1;transl_table=11 PYKI01001982.1 Genbank gene 764 1087 . + . ID=gene-C9F07_19100;Name=C9F07_19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19100 PYKI01001982.1 Protein Homology CDS 764 1087 . + 0 ID=cds-TGD60241.1;Parent=gene-C9F07_19100;Dbxref=NCBI_GP:TGD60241.1;Name=TGD60241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458158.1;locus_tag=C9F07_19100;product=transcriptional regulator;protein_id=TGD60241.1;transl_table=11 PYKI01001982.1 Genbank gene 1178 1447 . - . ID=gene-C9F07_19105;Name=C9F07_19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19105 PYKI01001982.1 Protein Homology CDS 1178 1447 . - 0 ID=cds-TGD60242.1;Parent=gene-C9F07_19105;Dbxref=NCBI_GP:TGD60242.1;Name=TGD60242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458157.1;locus_tag=C9F07_19105;product=HPr family phosphocarrier protein;protein_id=TGD60242.1;transl_table=11 PYKI01001982.1 Genbank gene 1457 2317 . - . ID=gene-C9F07_19110;Name=C9F07_19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19110 PYKI01001982.1 Protein Homology CDS 1457 2317 . - 0 ID=cds-TGD60243.1;Parent=gene-C9F07_19110;Dbxref=NCBI_GP:TGD60243.1;Name=TGD60243.1;Note=class II aldolase%3B catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle%2C glycolysis and gluconeogenesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=C9F07_19110;product=ketose-bisphosphate aldolase;protein_id=TGD60243.1;transl_table=11 PYKI01001982.1 Genbank pseudogene 2380 3864 . - . ID=gene-C9F07_19115;Name=C9F07_19115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19115;pseudo=true PYKI01001982.1 Protein Homology CDS 2380 3864 . - 0 ID=cds-C9F07_19115;Parent=gene-C9F07_19115;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462680.1;locus_tag=C9F07_19115;product=carbohydrate kinase;pseudo=true;transl_table=11 PYKI01001982.1 Genbank gene 3857 4010 . - . ID=gene-C9F07_19120;Name=C9F07_19120;end_range=4010,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19120;partial=true PYKI01001982.1 Protein Homology CDS 3857 4010 . - 1 ID=cds-TGD60244.1;Parent=gene-C9F07_19120;Dbxref=NCBI_GP:TGD60244.1;Name=TGD60244.1;Note=with GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol%3B subunit IIC forms the translocation channel and contains the substrate binding site;end_range=4010,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462681.1;locus_tag=C9F07_19120;partial=true;product=PTS galactitol transporter subunit IIC;protein_id=TGD60244.1;transl_table=11 ##sequence-region PYKI01001338.1 1 1241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001338.1 Genbank region 1 1241 . + . ID=PYKI01001338.1:1..1241;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001338.1 Genbank gene 1 1051 . - . ID=gene-C9F07_12480;Name=C9F07_12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12480;partial=true;start_range=.,1 PYKI01001338.1 Protein Homology CDS 1 1051 . - 0 ID=cds-TGD85751.1;Parent=gene-C9F07_12480;Dbxref=NCBI_GP:TGD85751.1;Name=TGD85751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=C9F07_12480;partial=true;product=YjbH domain-containing protein;protein_id=TGD85751.1;start_range=.,1;transl_table=11 PYKI01001338.1 Genbank gene 1051 1241 . - . ID=gene-C9F07_12485;Name=C9F07_12485;end_range=1241,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12485;partial=true PYKI01001338.1 Protein Homology CDS 1051 1241 . - 2 ID=cds-TGD85752.1;Parent=gene-C9F07_12485;Dbxref=NCBI_GP:TGD85752.1;Name=TGD85752.1;end_range=1241,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458522.1;locus_tag=C9F07_12485;partial=true;product=hypothetical protein;protein_id=TGD85752.1;transl_table=11 ##sequence-region PYKI01003287.1 1 1205 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003287.1 Genbank region 1 1205 . + . ID=PYKI01003287.1:1..1205;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003287.1 Genbank gene 1 1042 . - . ID=gene-C9F07_33070;Name=C9F07_33070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33070;partial=true;start_range=.,1 PYKI01003287.1 Protein Homology CDS 1 1042 . - 0 ID=cds-TGD36117.1;Parent=gene-C9F07_33070;Dbxref=NCBI_GP:TGD36117.1;Name=TGD36117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=C9F07_33070;partial=true;product=amidophosphoribosyltransferase;protein_id=TGD36117.1;start_range=.,1;transl_table=11 PYKI01003287.1 Genbank gene 1080 1205 . - . ID=gene-C9F07_33075;Name=C9F07_33075;end_range=1205,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33075;partial=true PYKI01003287.1 Protein Homology CDS 1080 1205 . - 0 ID=cds-TGD36118.1;Parent=gene-C9F07_33075;Dbxref=NCBI_GP:TGD36118.1;Name=TGD36118.1;Note=membrane protein required for colicin V production;end_range=1205,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456905.1;locus_tag=C9F07_33075;partial=true;product=colicin V production protein;protein_id=TGD36118.1;transl_table=11 ##sequence-region PYKI01002105.1 1 1239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002105.1 Genbank region 1 1239 . + . ID=PYKI01002105.1:1..1239;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002105.1 Genbank pseudogene 39 464 . - . ID=gene-C9F07_20430;Name=C9F07_20430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20430;pseudo=true PYKI01002105.1 Protein Homology CDS 39 464 . - 0 ID=cds-C9F07_20430;Parent=gene-C9F07_20430;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=C9F07_20430;product=3-oxoacyl-ACP reductase FabG;pseudo=true;transl_table=11 PYKI01002105.1 Genbank gene 477 1239 . - . ID=gene-C9F07_20435;Name=fabD;end_range=1239,.;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=C9F07_20435;partial=true PYKI01002105.1 Protein Homology CDS 477 1239 . - 1 ID=cds-TGD58774.1;Parent=gene-C9F07_20435;Dbxref=NCBI_GP:TGD58774.1;Name=TGD58774.1;end_range=1239,.;gbkey=CDS;gene=fabD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=C9F07_20435;partial=true;product=[acyl-carrier-protein] S-malonyltransferase;protein_id=TGD58774.1;transl_table=11 ##sequence-region PYKI01002348.1 1 1238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002348.1 Genbank region 1 1238 . + . ID=PYKI01002348.1:1..1238;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002348.1 Genbank pseudogene 10 483 . - . ID=gene-C9F07_23070;Name=C9F07_23070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23070;pseudo=true PYKI01002348.1 Protein Homology CDS 10 483 . - 0 ID=cds-C9F07_23070;Parent=gene-C9F07_23070;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456066.1;locus_tag=C9F07_23070;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002348.1 Genbank gene 586 1238 . - . ID=gene-C9F07_23075;Name=manA;end_range=1238,.;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=C9F07_23075;partial=true PYKI01002348.1 Protein Homology CDS 586 1238 . - 2 ID=cds-TGD53300.1;Parent=gene-C9F07_23075;Dbxref=NCBI_GP:TGD53300.1;Name=TGD53300.1;end_range=1238,.;gbkey=CDS;gene=manA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456065.1;locus_tag=C9F07_23075;partial=true;product=mannose-6-phosphate isomerase%2C class I;protein_id=TGD53300.1;transl_table=11 ##sequence-region PYKI01001114.1 1 1238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001114.1 Genbank region 1 1238 . + . ID=PYKI01001114.1:1..1238;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001114.1 Genbank gene 3 245 . + . ID=gene-C9F07_10380;Name=C9F07_10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10380 PYKI01001114.1 Protein Homology CDS 3 245 . + 0 ID=cds-TGD94954.1;Parent=gene-C9F07_10380;Dbxref=NCBI_GP:TGD94954.1;Name=TGD94954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001640993.1;locus_tag=C9F07_10380;product=transcriptional regulator;protein_id=TGD94954.1;transl_table=11 PYKI01001114.1 Genbank gene 242 1168 . - . ID=gene-C9F07_10385;Name=C9F07_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10385 PYKI01001114.1 Protein Homology CDS 242 1168 . - 0 ID=cds-TGD94955.1;Parent=gene-C9F07_10385;Dbxref=NCBI_GP:TGD94955.1;Name=TGD94955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457232.1;locus_tag=C9F07_10385;product=arabinose-5-phosphate isomerase GutQ;protein_id=TGD94955.1;transl_table=11 ##sequence-region PYKI01003567.1 1 1237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003567.1 Genbank region 1 1237 . + . ID=PYKI01003567.1:1..1237;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003567.1 Genbank pseudogene 72 614 . - . ID=gene-C9F07_36020;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=pseudogene;locus_tag=C9F07_36020;pseudo=true PYKI01003567.1 Protein Homology CDS 72 614 . - 0 ID=cds-C9F07_36020;Parent=gene-C9F07_36020;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=dapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454675.1;locus_tag=C9F07_36020;product=4-hydroxy-tetrahydrodipicolinate reductase;pseudo=true;transl_table=11 PYKI01003567.1 Genbank gene 794 1237 . - . ID=gene-C9F07_36025;Name=C9F07_36025;end_range=1237,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36025;partial=true PYKI01003567.1 Protein Homology CDS 794 1237 . - 0 ID=cds-TGD30337.1;Parent=gene-C9F07_36025;Dbxref=NCBI_GP:TGD30337.1;Name=TGD30337.1;end_range=1237,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=C9F07_36025;partial=true;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=TGD30337.1;transl_table=11 ##sequence-region PYKI01003218.1 1 1236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003218.1 Genbank region 1 1236 . + . ID=PYKI01003218.1:1..1236;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003218.1 Genbank gene 59 1045 . - . ID=gene-C9F07_32395;Name=C9F07_32395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32395 PYKI01003218.1 Protein Homology CDS 59 1045 . - 0 ID=cds-TGD36799.1;Parent=gene-C9F07_32395;Dbxref=NCBI_GP:TGD36799.1;Name=TGD36799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455210.1;locus_tag=C9F07_32395;product=LysR family transcriptional regulator;protein_id=TGD36799.1;transl_table=11 ##sequence-region PYKI01002271.1 1 1236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002271.1 Genbank region 1 1236 . + . ID=PYKI01002271.1:1..1236;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002271.1 Genbank gene 1 1236 . + . ID=gene-C9F07_22225;Name=C9F07_22225;end_range=1236,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22225;partial=true;start_range=.,1 PYKI01002271.1 Protein Homology CDS 1 1236 . + 2 ID=cds-TGD55197.1;Parent=gene-C9F07_22225;Dbxref=NCBI_GP:TGD55197.1;Name=TGD55197.1;end_range=1236,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=C9F07_22225;partial=true;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=TGD55197.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000627.1 1 1235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000627.1 Genbank region 1 1235 . + . ID=PYKI01000627.1:1..1235;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000627.1 Genbank gene 1 1235 . - . ID=gene-C9F07_05415;Name=C9F07_05415;end_range=1235,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05415;partial=true;start_range=.,1 PYKI01000627.1 Protein Homology CDS 1 1235 . - 2 ID=cds-TGE13434.1;Parent=gene-C9F07_05415;Dbxref=NCBI_GP:TGE13434.1;Name=TGE13434.1;end_range=1235,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9F07_05415;partial=true;product=Ig domain protein;protein_id=TGE13434.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001920.1 1 4008 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001920.1 Genbank region 1 4008 . + . ID=PYKI01001920.1:1..4008;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001920.1 Genbank gene 1 550 . - . ID=gene-C9F07_18485;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=C9F07_18485;partial=true;start_range=.,1 PYKI01001920.1 Protein Homology CDS 1 550 . - 0 ID=cds-TGD61043.1;Parent=gene-C9F07_18485;Dbxref=NCBI_GP:TGD61043.1;Name=TGD61043.1;Note=catalyzes the formation of 5-keto-4-deoxy-D-glucarate from glucarate;gbkey=CDS;gene=gudD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461881.1;locus_tag=C9F07_18485;partial=true;product=glucarate dehydratase;protein_id=TGD61043.1;start_range=.,1;transl_table=11 PYKI01001920.1 Genbank gene 571 1911 . - . ID=gene-C9F07_18490;Name=C9F07_18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18490 PYKI01001920.1 Protein Homology CDS 571 1911 . - 0 ID=cds-TGD61044.1;Parent=gene-C9F07_18490;Dbxref=NCBI_GP:TGD61044.1;Name=TGD61044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457357.1;locus_tag=C9F07_18490;product=glucarate dehydratase;protein_id=TGD61044.1;transl_table=11 PYKI01001920.1 Genbank gene 1908 3266 . - . ID=gene-C9F07_18495;Name=C9F07_18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18495 PYKI01001920.1 Protein Homology CDS 1908 3266 . - 0 ID=cds-TGD61045.1;Parent=gene-C9F07_18495;Dbxref=NCBI_GP:TGD61045.1;Name=TGD61045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=C9F07_18495;product=MFS transporter;protein_id=TGD61045.1;transl_table=11 PYKI01001920.1 Genbank gene 3346 3576 . + . ID=gene-C9F07_18500;Name=C9F07_18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18500 PYKI01001920.1 Protein Homology CDS 3346 3576 . + 0 ID=cds-TGD61046.1;Parent=gene-C9F07_18500;Dbxref=NCBI_GP:TGD61046.1;Name=TGD61046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001638856.1;locus_tag=C9F07_18500;product=hypothetical protein;protein_id=TGD61046.1;transl_table=11 PYKI01001920.1 Genbank gene 3748 4008 . - . ID=gene-C9F07_18505;Name=C9F07_18505;end_range=4008,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18505;partial=true PYKI01001920.1 Protein Homology CDS 3748 4008 . - 0 ID=cds-TGD61047.1;Parent=gene-C9F07_18505;Dbxref=NCBI_GP:TGD61047.1;Name=TGD61047.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;end_range=4008,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=C9F07_18505;partial=true;product=flavodoxin;protein_id=TGD61047.1;transl_table=11 ##sequence-region PYKI01001322.1 1 1235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001322.1 Genbank region 1 1235 . + . ID=PYKI01001322.1:1..1235;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001322.1 Genbank gene 1 946 . - . ID=gene-C9F07_12380;Name=C9F07_12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12380;partial=true;start_range=.,1 PYKI01001322.1 Protein Homology CDS 1 946 . - 0 ID=cds-TGD86153.1;Parent=gene-C9F07_12380;Dbxref=NCBI_GP:TGD86153.1;Name=TGD86153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=C9F07_12380;partial=true;product=aminotransferase;protein_id=TGD86153.1;start_range=.,1;transl_table=11 PYKI01001322.1 Genbank gene 959 1235 . - . ID=gene-C9F07_12385;Name=C9F07_12385;end_range=1235,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12385;partial=true PYKI01001322.1 Protein Homology CDS 959 1235 . - 1 ID=cds-TGD86154.1;Parent=gene-C9F07_12385;Dbxref=NCBI_GP:TGD86154.1;Name=TGD86154.1;end_range=1235,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=C9F07_12385;partial=true;product=Na+/H+ antiporter NhaC;protein_id=TGD86154.1;transl_table=11 ##sequence-region PYKI01001108.1 1 1234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001108.1 Genbank region 1 1234 . + . ID=PYKI01001108.1:1..1234;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001108.1 Genbank gene 1 937 . + . ID=gene-C9F07_10330;Name=C9F07_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10330;partial=true;start_range=.,1 PYKI01001108.1 Protein Homology CDS 1 937 . + 1 ID=cds-TGD95093.1;Parent=gene-C9F07_10330;Dbxref=NCBI_GP:TGD95093.1;Name=TGD95093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455152.1;locus_tag=C9F07_10330;partial=true;product=aromatic amino acid transporter AroP;protein_id=TGD95093.1;start_range=.,1;transl_table=11 PYKI01001108.1 Genbank gene 979 1234 . - . ID=gene-C9F07_10335;Name=C9F07_10335;end_range=1234,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10335;partial=true PYKI01001108.1 Protein Homology CDS 979 1234 . - 1 ID=cds-TGD95094.1;Parent=gene-C9F07_10335;Dbxref=NCBI_GP:TGD95094.1;Name=TGD95094.1;end_range=1234,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455153.1;locus_tag=C9F07_10335;partial=true;product=miniconductance mechanosensitive channel;protein_id=TGD95094.1;transl_table=11 ##sequence-region PYKI01001024.1 1 1233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001024.1 Genbank region 1 1233 . + . ID=PYKI01001024.1:1..1233;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001024.1 Genbank pseudogene 62 244 . - . ID=gene-C9F07_09430;Name=C9F07_09430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09430;pseudo=true PYKI01001024.1 Protein Homology CDS 62 244 . - 0 ID=cds-C9F07_09430;Parent=gene-C9F07_09430;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456676.1;locus_tag=C9F07_09430;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001024.1 Genbank pseudogene 244 1233 . - . ID=gene-C9F07_09435;Name=C9F07_09435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09435;pseudo=true PYKI01001024.1 Protein Homology CDS 244 1233 . - 0 ID=cds-C9F07_09435;Parent=gene-C9F07_09435;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456675.1;locus_tag=C9F07_09435;product=multidrug transporter subunit MdtD;pseudo=true;transl_table=11 ##sequence-region PYKI01002881.1 1 1232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002881.1 Genbank region 1 1232 . + . ID=PYKI01002881.1:1..1232;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002881.1 Genbank gene 42 1061 . - . ID=gene-C9F07_28850;Name=C9F07_28850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28850 PYKI01002881.1 Protein Homology CDS 42 1061 . - 0 ID=cds-TGD44468.1;Parent=gene-C9F07_28850;Dbxref=NCBI_GP:TGD44468.1;Name=TGD44468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458227.1;locus_tag=C9F07_28850;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=TGD44468.1;transl_table=11 PYKI01002881.1 Genbank gene 1061 1232 . - . ID=gene-C9F07_28855;Name=C9F07_28855;end_range=1232,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28855;partial=true PYKI01002881.1 Protein Homology CDS 1061 1232 . - 1 ID=cds-TGD44469.1;Parent=gene-C9F07_28855;Dbxref=NCBI_GP:TGD44469.1;Name=TGD44469.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;end_range=1232,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=C9F07_28855;partial=true;product=protein-export chaperone SecB;protein_id=TGD44469.1;transl_table=11 ##sequence-region PYKI01001572.1 1 1231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001572.1 Genbank region 1 1231 . + . ID=PYKI01001572.1:1..1231;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001572.1 Genbank gene 1 365 . - . ID=gene-C9F07_15045;Name=C9F07_15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15045;partial=true;start_range=.,1 PYKI01001572.1 Protein Homology CDS 1 365 . - 0 ID=cds-TGD73232.1;Parent=gene-C9F07_15045;Dbxref=NCBI_GP:TGD73232.1;Name=TGD73232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456250.1;locus_tag=C9F07_15045;partial=true;product=mechanosensitive ion channel protein MscS;protein_id=TGD73232.1;start_range=.,1;transl_table=11 PYKI01001572.1 Genbank gene 559 885 . + . ID=gene-C9F07_15050;Name=C9F07_15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15050 PYKI01001572.1 Protein Homology CDS 559 885 . + 0 ID=cds-TGD73231.1;Parent=gene-C9F07_15050;Dbxref=NCBI_GP:TGD73231.1;Name=TGD73231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=C9F07_15050;product=four-helix bundle copper-binding protein;protein_id=TGD73231.1;transl_table=11 PYKI01001572.1 Genbank gene 894 970 . + . ID=gene-C9F07_15055;Name=C9F07_15055;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_15055 PYKI01001572.1 tRNAscan-SE tRNA 894 970 . + . ID=rna-C9F07_15055;Parent=gene-C9F07_15055;anticodon=(pos:928..930);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_15055;product=tRNA-Arg PYKI01001572.1 tRNAscan-SE exon 894 970 . + . ID=exon-C9F07_15055-1;Parent=rna-C9F07_15055;anticodon=(pos:928..930);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_15055;product=tRNA-Arg PYKI01001572.1 Genbank gene 1079 1231 . + . ID=gene-C9F07_15060;Name=C9F07_15060;end_range=1231,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15060;partial=true PYKI01001572.1 Protein Homology CDS 1079 1231 . + 0 ID=cds-TGD73233.1;Parent=gene-C9F07_15060;Dbxref=NCBI_GP:TGD73233.1;Name=TGD73233.1;end_range=1231,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456248.1;locus_tag=C9F07_15060;partial=true;product=metal-binding protein ZinT;protein_id=TGD73233.1;transl_table=11 ##sequence-region PYKI01000191.1 1 1229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000191.1 Genbank region 1 1229 . + . ID=PYKI01000191.1:1..1229;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000191.1 Genbank gene 1 97 . - . ID=gene-C9F07_01290;Name=C9F07_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01290;partial=true;start_range=.,1 PYKI01000191.1 Protein Homology CDS 1 97 . - 0 ID=cds-TGE30034.1;Parent=gene-C9F07_01290;Dbxref=NCBI_GP:TGE30034.1;Name=TGE30034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456469.1;locus_tag=C9F07_01290;partial=true;product=hydrolase;protein_id=TGE30034.1;start_range=.,1;transl_table=11 PYKI01000191.1 Genbank gene 422 1229 . + . ID=gene-C9F07_01295;Name=C9F07_01295;end_range=1229,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01295;partial=true PYKI01000191.1 Protein Homology CDS 422 1229 . + 0 ID=cds-TGE30033.1;Parent=gene-C9F07_01295;Dbxref=NCBI_GP:TGE30033.1;Name=TGE30033.1;end_range=1229,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456468.1;locus_tag=C9F07_01295;partial=true;product=aspartate--tRNA ligase;protein_id=TGE30033.1;transl_table=11 ##sequence-region PYKI01002395.1 1 1228 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002395.1 Genbank region 1 1228 . + . ID=PYKI01002395.1:1..1228;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002395.1 Genbank gene 1 623 . + . ID=gene-C9F07_23575;Name=C9F07_23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23575;partial=true;start_range=.,1 PYKI01002395.1 Protein Homology CDS 1 623 . + 2 ID=cds-TGD52088.1;Parent=gene-C9F07_23575;Dbxref=NCBI_GP:TGD52088.1;Name=TGD52088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=C9F07_23575;partial=true;product=C4-dicarboxylate ABC transporter;protein_id=TGD52088.1;start_range=.,1;transl_table=11 PYKI01002395.1 Genbank gene 682 1228 . + . ID=gene-C9F07_23580;Name=C9F07_23580;end_range=1228,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23580;partial=true PYKI01002395.1 Protein Homology CDS 682 1228 . + 0 ID=cds-TGD52087.1;Parent=gene-C9F07_23580;Dbxref=NCBI_GP:TGD52087.1;Name=TGD52087.1;end_range=1228,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=C9F07_23580;partial=true;product=type II asparaginase;protein_id=TGD52087.1;transl_table=11 ##sequence-region PYKI01003447.1 1 1227 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003447.1 Genbank region 1 1227 . + . ID=PYKI01003447.1:1..1227;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003447.1 Genbank gene 1 838 . - . ID=gene-C9F07_34655;Name=C9F07_34655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34655;partial=true;start_range=.,1 PYKI01003447.1 Protein Homology CDS 1 838 . - 0 ID=cds-TGD33405.1;Parent=gene-C9F07_34655;Dbxref=NCBI_GP:TGD33405.1;Name=TGD33405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456760.1;locus_tag=C9F07_34655;partial=true;product=YeiH family putative sulfate export transporter;protein_id=TGD33405.1;start_range=.,1;transl_table=11 PYKI01003447.1 Genbank pseudogene 959 1102 . + . ID=gene-C9F07_34660;Name=C9F07_34660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34660;pseudo=true PYKI01003447.1 Protein Homology CDS 959 1102 . + 0 ID=cds-C9F07_34660;Parent=gene-C9F07_34660;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456759.1;locus_tag=C9F07_34660;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01001883.1 1 3999 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001883.1 Genbank region 1 3999 . + . ID=PYKI01001883.1:1..3999;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001883.1 Genbank gene 1 389 . - . ID=gene-C9F07_18170;Name=C9F07_18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18170;partial=true;start_range=.,1 PYKI01001883.1 Protein Homology CDS 1 389 . - 0 ID=cds-TGD62039.1;Parent=gene-C9F07_18170;Dbxref=NCBI_GP:TGD62039.1;Name=TGD62039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455566.1;locus_tag=C9F07_18170;partial=true;product=Lon protease;protein_id=TGD62039.1;start_range=.,1;transl_table=11 PYKI01001883.1 Genbank gene 575 1027 . + . ID=gene-C9F07_18175;Name=C9F07_18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18175 PYKI01001883.1 Protein Homology CDS 575 1027 . + 0 ID=cds-TGD62036.1;Parent=gene-C9F07_18175;Dbxref=NCBI_GP:TGD62036.1;Name=TGD62036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=C9F07_18175;product=macrodomain Ter protein;protein_id=TGD62036.1;transl_table=11 PYKI01001883.1 Genbank gene 1099 2151 . - . ID=gene-C9F07_18180;Name=C9F07_18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18180 PYKI01001883.1 Protein Homology CDS 1099 2151 . - 0 ID=cds-TGD62040.1;Parent=gene-C9F07_18180;Dbxref=NCBI_GP:TGD62040.1;Name=TGD62040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455568.1;locus_tag=C9F07_18180;product=porin OmpA;protein_id=TGD62040.1;transl_table=11 PYKI01001883.1 Genbank gene 2508 3017 . - . ID=gene-C9F07_18185;Name=C9F07_18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18185 PYKI01001883.1 Protein Homology CDS 2508 3017 . - 0 ID=cds-TGD62037.1;Parent=gene-C9F07_18185;Dbxref=NCBI_GP:TGD62037.1;Name=TGD62037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455569.1;locus_tag=C9F07_18185;product=cell division inhibitor SulA;protein_id=TGD62037.1;transl_table=11 PYKI01001883.1 Genbank gene 3234 3839 . + . ID=gene-C9F07_18190;Name=C9F07_18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18190 PYKI01001883.1 Protein Homology CDS 3234 3839 . + 0 ID=cds-TGD62038.1;Parent=gene-C9F07_18190;Dbxref=NCBI_GP:TGD62038.1;Name=TGD62038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=C9F07_18190;product=DNA transformation protein;protein_id=TGD62038.1;transl_table=11 ##sequence-region PYKI01001858.1 1 1227 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001858.1 Genbank region 1 1227 . + . ID=PYKI01001858.1:1..1227;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001858.1 Genbank gene 1 284 . - . ID=gene-C9F07_17865;Name=C9F07_17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17865;partial=true;start_range=.,1 PYKI01001858.1 Protein Homology CDS 1 284 . - 0 ID=cds-TGD63193.1;Parent=gene-C9F07_17865;Dbxref=NCBI_GP:TGD63193.1;Name=TGD63193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463405.1;locus_tag=C9F07_17865;partial=true;product=hypothetical protein;protein_id=TGD63193.1;start_range=.,1;transl_table=11 PYKI01001858.1 Genbank gene 861 1227 . + . ID=gene-C9F07_17870;Name=C9F07_17870;end_range=1227,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17870;partial=true PYKI01001858.1 Protein Homology CDS 861 1227 . + 0 ID=cds-TGD63194.1;Parent=gene-C9F07_17870;Dbxref=NCBI_GP:TGD63194.1;Name=TGD63194.1;end_range=1227,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=C9F07_17870;partial=true;product=DNA-binding response regulator;protein_id=TGD63194.1;transl_table=11 ##sequence-region PYKI01001037.1 1 1227 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001037.1 Genbank region 1 1227 . + . ID=PYKI01001037.1:1..1227;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001037.1 Genbank gene 1 843 . + . ID=gene-C9F07_09550;Name=C9F07_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09550;partial=true;start_range=.,1 PYKI01001037.1 Protein Homology CDS 1 843 . + 0 ID=cds-TGD96868.1;Parent=gene-C9F07_09550;Dbxref=NCBI_GP:TGD96868.1;Name=TGD96868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026196.1;locus_tag=C9F07_09550;partial=true;product=YgiQ family radical SAM protein;protein_id=TGD96868.1;start_range=.,1;transl_table=11 PYKI01001037.1 Genbank gene 881 1111 . - . ID=gene-C9F07_09555;Name=C9F07_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09555 PYKI01001037.1 Protein Homology CDS 881 1111 . - 0 ID=cds-TGD96869.1;Parent=gene-C9F07_09555;Dbxref=NCBI_GP:TGD96869.1;Name=TGD96869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044026.1;locus_tag=C9F07_09555;product=hypothetical protein;protein_id=TGD96869.1;transl_table=11 ##sequence-region PYKI01003527.1 1 1226 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003527.1 Genbank region 1 1226 . + . ID=PYKI01003527.1:1..1226;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003527.1 Genbank gene 1 691 . + . ID=gene-C9F07_35605;Name=C9F07_35605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35605;partial=true;start_range=.,1 PYKI01003527.1 Protein Homology CDS 1 691 . + 1 ID=cds-TGD31370.1;Parent=gene-C9F07_35605;Dbxref=NCBI_GP:TGD31370.1;Name=TGD31370.1;Note=laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454781.1;locus_tag=C9F07_35605;partial=true;product=multicopper oxidase;protein_id=TGD31370.1;start_range=.,1;transl_table=11 PYKI01003527.1 Genbank gene 769 1226 . - . ID=gene-C9F07_35610;Name=C9F07_35610;end_range=1226,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35610;partial=true PYKI01003527.1 Protein Homology CDS 769 1226 . - 2 ID=cds-TGD31371.1;Parent=gene-C9F07_35610;Dbxref=NCBI_GP:TGD31371.1;Name=TGD31371.1;Note=quinoprotein glucose dehydrogenase%3B catalyzes the formation of D-glucono-1%2C5-lactone from D-glucose and ubiquinone;end_range=1226,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=C9F07_35610;partial=true;product=membrane-bound PQQ-dependent dehydrogenase%2C glucose/quinate/shikimate family;protein_id=TGD31371.1;transl_table=11 ##sequence-region PYKI01002465.1 1 1226 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002465.1 Genbank region 1 1226 . + . ID=PYKI01002465.1:1..1226;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002465.1 Genbank gene 1 842 . - . ID=gene-C9F07_24340;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=C9F07_24340;partial=true;start_range=.,1 PYKI01002465.1 Protein Homology CDS 1 842 . - 0 ID=cds-TGD50701.1;Parent=gene-C9F07_24340;Dbxref=NCBI_GP:TGD50701.1;Name=TGD50701.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=C9F07_24340;partial=true;product=peptide ABC transporter permease SapB;protein_id=TGD50701.1;start_range=.,1;transl_table=11 PYKI01002465.1 Genbank gene 839 1226 . - . ID=gene-C9F07_24345;Name=C9F07_24345;end_range=1226,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24345;partial=true PYKI01002465.1 Protein Homology CDS 839 1226 . - 1 ID=cds-TGD50702.1;Parent=gene-C9F07_24345;Dbxref=NCBI_GP:TGD50702.1;Name=TGD50702.1;end_range=1226,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=C9F07_24345;partial=true;product=peptide ABC transporter substrate-binding protein SapA;protein_id=TGD50702.1;transl_table=11 ##sequence-region PYKI01002170.1 1 1226 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002170.1 Genbank region 1 1226 . + . ID=PYKI01002170.1:1..1226;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002170.1 Genbank pseudogene 1 840 . + . ID=gene-C9F07_21090;Name=C9F07_21090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21090;pseudo=true PYKI01002170.1 Protein Homology CDS 1 840 . + 0 ID=cds-C9F07_21090;Parent=gene-C9F07_21090;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456868.1;locus_tag=C9F07_21090;product=NADH-quinone oxidoreductase subunit C/D;pseudo=true;transl_table=11 PYKI01002170.1 Genbank pseudogene 843 1124 . + . ID=gene-C9F07_21095;Name=C9F07_21095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21095;pseudo=true PYKI01002170.1 Protein Homology CDS 843 1124 . + 0 ID=cds-C9F07_21095;Parent=gene-C9F07_21095;Note=Catalyzes the transfer of electrons from NADH to quinone%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124159.1;locus_tag=C9F07_21095;product=NADH-quinone oxidoreductase subunit E;pseudo=true;transl_table=11 ##sequence-region PYKI01002092.1 1 1224 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002092.1 Genbank region 1 1224 . + . ID=PYKI01002092.1:1..1224;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002092.1 Genbank gene 1 578 . - . ID=gene-C9F07_20300;Name=C9F07_20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20300;partial=true;start_range=.,1 PYKI01002092.1 Protein Homology CDS 1 578 . - 0 ID=cds-TGD58810.1;Parent=gene-C9F07_20300;Dbxref=NCBI_GP:TGD58810.1;Name=TGD58810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455636.1;locus_tag=C9F07_20300;partial=true;product=transcriptional regulator CsgD;protein_id=TGD58810.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001845.1 1 1224 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001845.1 Genbank region 1 1224 . + . ID=PYKI01001845.1:1..1224;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001845.1 Genbank gene 1 1224 . + . ID=gene-C9F07_17735;Name=tamB;end_range=1224,.;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=C9F07_17735;partial=true;start_range=.,1 PYKI01001845.1 Protein Homology CDS 1 1224 . + 2 ID=cds-TGD63779.1;Parent=gene-C9F07_17735;Dbxref=NCBI_GP:TGD63779.1;Name=TGD63779.1;end_range=1224,.;gbkey=CDS;gene=tamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=C9F07_17735;partial=true;product=autotransporter assembly complex protein TamB;protein_id=TGD63779.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002416.1 1 1223 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002416.1 Genbank region 1 1223 . + . ID=PYKI01002416.1:1..1223;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002416.1 Genbank gene 16 852 . + . ID=gene-C9F07_23885;Name=C9F07_23885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23885 PYKI01002416.1 Protein Homology CDS 16 852 . + 0 ID=cds-TGD51590.1;Parent=gene-C9F07_23885;Dbxref=NCBI_GP:TGD51590.1;Name=TGD51590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460530.3;locus_tag=C9F07_23885;product=EamA family transporter;protein_id=TGD51590.1;transl_table=11 ##sequence-region PYKI01002160.1 1 1223 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002160.1 Genbank region 1 1223 . + . ID=PYKI01002160.1:1..1223;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002160.1 Genbank gene 1 475 . + . ID=gene-C9F07_20985;Name=C9F07_20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20985;partial=true;start_range=.,1 PYKI01002160.1 Protein Homology CDS 1 475 . + 1 ID=cds-TGD57227.1;Parent=gene-C9F07_20985;Dbxref=NCBI_GP:TGD57227.1;Name=TGD57227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=C9F07_20985;partial=true;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=TGD57227.1;start_range=.,1;transl_table=11 PYKI01002160.1 Genbank gene 538 1223 . - . ID=gene-C9F07_20990;Name=C9F07_20990;end_range=1223,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20990;partial=true PYKI01002160.1 Protein Homology CDS 538 1223 . - 2 ID=cds-TGD57228.1;Parent=gene-C9F07_20990;Dbxref=NCBI_GP:TGD57228.1;Name=TGD57228.1;Note=protein p43%3B inner membrane protein that exports enterobactin to the periplasmic space%3B member of the major facilitator superfamily (MFS) of transporters;end_range=1223,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=C9F07_20990;partial=true;product=MFS transporter;protein_id=TGD57228.1;transl_table=11 ##sequence-region PYKI01001310.1 1 1222 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001310.1 Genbank region 1 1222 . + . ID=PYKI01001310.1:1..1222;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001310.1 Genbank pseudogene 42 560 . - . ID=gene-C9F07_12260;Name=C9F07_12260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12260;pseudo=true PYKI01001310.1 Protein Homology CDS 42 560 . - 0 ID=cds-C9F07_12260;Parent=gene-C9F07_12260;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=C9F07_12260;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 PYKI01001310.1 Genbank gene 824 1222 . + . ID=gene-C9F07_12265;Name=C9F07_12265;end_range=1222,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12265;partial=true PYKI01001310.1 Protein Homology CDS 824 1222 . + 0 ID=cds-TGD86626.1;Parent=gene-C9F07_12265;Dbxref=NCBI_GP:TGD86626.1;Name=TGD86626.1;end_range=1222,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=C9F07_12265;partial=true;product=hypothetical protein;protein_id=TGD86626.1;transl_table=11 ##sequence-region PYKI01002637.1 1 3997 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002637.1 Genbank region 1 3997 . + . ID=PYKI01002637.1:1..3997;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002637.1 Genbank pseudogene 409 1050 . - . ID=gene-C9F07_26245;Name=C9F07_26245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26245;pseudo=true PYKI01002637.1 Protein Homology CDS 409 1050 . - 0 ID=cds-C9F07_26245;Parent=gene-C9F07_26245;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727645.1;locus_tag=C9F07_26245;product=threonine transporter RhtB;pseudo=true;transl_table=11 PYKI01002637.1 Genbank gene 1098 1913 . - . ID=gene-C9F07_26250;Name=C9F07_26250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26250 PYKI01002637.1 Protein Homology CDS 1098 1913 . - 0 ID=cds-TGD49414.1;Parent=gene-C9F07_26250;Dbxref=NCBI_GP:TGD49414.1;Name=TGD49414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887420.1;locus_tag=C9F07_26250;product=AraC family transcriptional regulator;protein_id=TGD49414.1;transl_table=11 PYKI01002637.1 Genbank gene 1950 2906 . - . ID=gene-C9F07_26255;Name=C9F07_26255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26255 PYKI01002637.1 Protein Homology CDS 1950 2906 . - 0 ID=cds-TGD49415.1;Parent=gene-C9F07_26255;Dbxref=NCBI_GP:TGD49415.1;Name=TGD49415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458953.1;locus_tag=C9F07_26255;product=GTPase;protein_id=TGD49415.1;transl_table=11 PYKI01002637.1 Genbank gene 2917 3120 . - . ID=gene-C9F07_26260;Name=C9F07_26260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26260 PYKI01002637.1 Protein Homology CDS 2917 3120 . - 0 ID=cds-TGD49416.1;Parent=gene-C9F07_26260;Dbxref=NCBI_GP:TGD49416.1;Name=TGD49416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458954.1;locus_tag=C9F07_26260;product=DUF466 domain-containing protein;protein_id=TGD49416.1;transl_table=11 PYKI01002637.1 Genbank gene 3215 3997 . - . ID=gene-C9F07_26265;Name=C9F07_26265;end_range=3997,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26265;partial=true PYKI01002637.1 Protein Homology CDS 3215 3997 . - 0 ID=cds-TGD49417.1;Parent=gene-C9F07_26265;Dbxref=NCBI_GP:TGD49417.1;Name=TGD49417.1;end_range=3997,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458955.1;locus_tag=C9F07_26265;partial=true;product=carbon starvation protein A-like protein;protein_id=TGD49417.1;transl_table=11 ##sequence-region PYKI01002552.1 1 1221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002552.1 Genbank region 1 1221 . + . ID=PYKI01002552.1:1..1221;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002552.1 Genbank gene 1 1011 . - . ID=gene-C9F07_25335;Name=C9F07_25335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25335;partial=true;start_range=.,1 PYKI01002552.1 Protein Homology CDS 1 1011 . - 0 ID=cds-TGD49907.1;Parent=gene-C9F07_25335;Dbxref=NCBI_GP:TGD49907.1;Name=TGD49907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458598.1;locus_tag=C9F07_25335;partial=true;product=melibiose:sodium transporter MelB;protein_id=TGD49907.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000940.1 1 1221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000940.1 Genbank region 1 1221 . + . ID=PYKI01000940.1:1..1221;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000940.1 Genbank gene 1 387 . - . ID=gene-C9F07_08565;Name=C9F07_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08565;partial=true;start_range=.,1 PYKI01000940.1 Protein Homology CDS 1 387 . - 0 ID=cds-TGE02063.1;Parent=gene-C9F07_08565;Dbxref=NCBI_GP:TGE02063.1;Name=TGE02063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455202.1;locus_tag=C9F07_08565;partial=true;product=sensor histidine kinase DpiB;protein_id=TGE02063.1;start_range=.,1;transl_table=11 PYKI01000940.1 Genbank pseudogene 773 1144 . + . ID=gene-C9F07_08570;Name=C9F07_08570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08570;pseudo=true PYKI01000940.1 Protein Homology CDS 773 1144 . + 0 ID=cds-C9F07_08570;Parent=gene-C9F07_08570;Note=activates citrate lyase by acetylation of the gamma subunit%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=C9F07_08570;product=[citrate (pro-3S)-lyase] ligase;pseudo=true;transl_table=11 ##sequence-region PYKI01003362.1 1 1220 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003362.1 Genbank region 1 1220 . + . ID=PYKI01003362.1:1..1220;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003362.1 Genbank gene 1 1220 . + . ID=gene-C9F07_33860;Name=C9F07_33860;end_range=1220,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33860;partial=true;start_range=.,1 PYKI01003362.1 Protein Homology CDS 1 1220 . + 2 ID=cds-TGD34727.1;Parent=gene-C9F07_33860;Dbxref=NCBI_GP:TGD34727.1;Name=TGD34727.1;end_range=1220,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455377.1;locus_tag=C9F07_33860;partial=true;product=formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme;protein_id=TGD34727.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003297.1 1 1220 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003297.1 Genbank region 1 1220 . + . ID=PYKI01003297.1:1..1220;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003297.1 Genbank gene 1 466 . - . ID=gene-C9F07_33150;Name=C9F07_33150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33150;partial=true;start_range=.,1 PYKI01003297.1 Protein Homology CDS 1 466 . - 0 ID=cds-TGD36062.1;Parent=gene-C9F07_33150;Dbxref=NCBI_GP:TGD36062.1;Name=TGD36062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455799.1;locus_tag=C9F07_33150;partial=true;product=diguanylate phosphodiesterase;protein_id=TGD36062.1;start_range=.,1;transl_table=11 PYKI01003297.1 Genbank gene 932 1220 . - . ID=gene-C9F07_33155;Name=C9F07_33155;end_range=1220,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33155;partial=true PYKI01003297.1 Protein Homology CDS 932 1220 . - 1 ID=cds-TGD36063.1;Parent=gene-C9F07_33155;Dbxref=NCBI_GP:TGD36063.1;Name=TGD36063.1;end_range=1220,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455798.1;locus_tag=C9F07_33155;partial=true;product=hypothetical protein;protein_id=TGD36063.1;transl_table=11 ##sequence-region PYKI01000510.1 1 1220 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000510.1 Genbank region 1 1220 . + . ID=PYKI01000510.1:1..1220;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000510.1 Genbank gene 1 413 . + . ID=gene-C9F07_04210;Name=C9F07_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04210;partial=true;start_range=.,1 PYKI01000510.1 Protein Homology CDS 1 413 . + 2 ID=cds-TGE16861.1;Parent=gene-C9F07_04210;Dbxref=NCBI_GP:TGE16861.1;Name=TGE16861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310519.1;locus_tag=C9F07_04210;partial=true;product=PrkA family serine protein kinase;protein_id=TGE16861.1;start_range=.,1;transl_table=11 PYKI01000510.1 Genbank pseudogene 536 1168 . + . ID=gene-C9F07_04215;Name=C9F07_04215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04215;pseudo=true PYKI01000510.1 Protein Homology CDS 536 1168 . + 0 ID=cds-C9F07_04215;Parent=gene-C9F07_04215;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456227.1;locus_tag=C9F07_04215;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002690.1 1 1220 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002690.1 Genbank region 1 1220 . + . ID=PYKI01002690.1:1..1220;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002690.1 Genbank gene 1 1086 . - . ID=gene-C9F07_26800;Name=C9F07_26800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26800;partial=true;start_range=.,1 PYKI01002690.1 Protein Homology CDS 1 1086 . - 0 ID=cds-TGD48411.1;Parent=gene-C9F07_26800;Dbxref=NCBI_GP:TGD48411.1;Name=TGD48411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=C9F07_26800;partial=true;product=heme lyase NrfEFG subunit NrfE;protein_id=TGD48411.1;start_range=.,1;transl_table=11 PYKI01002690.1 Genbank gene 1079 1220 . - . ID=gene-C9F07_26805;Name=C9F07_26805;end_range=1220,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26805;partial=true PYKI01002690.1 Protein Homology CDS 1079 1220 . - 1 ID=cds-TGD48412.1;Parent=gene-C9F07_26805;Dbxref=NCBI_GP:TGD48412.1;Name=TGD48412.1;Note=membrane protein%2C may be involved in the transfer of electrons from quinones to c-type cytochromes;end_range=1220,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458578.1;locus_tag=C9F07_26805;partial=true;product=cytochrome c nitrite reductase subunit NrfD;protein_id=TGD48412.1;transl_table=11 ##sequence-region PYKI01003446.1 1 1218 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003446.1 Genbank region 1 1218 . + . ID=PYKI01003446.1:1..1218;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003446.1 Genbank gene 70 648 . - . ID=gene-C9F07_34645;Name=C9F07_34645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34645 PYKI01003446.1 Protein Homology CDS 70 648 . - 0 ID=cds-TGD33409.1;Parent=gene-C9F07_34645;Dbxref=NCBI_GP:TGD33409.1;Name=TGD33409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003833036.1;locus_tag=C9F07_34645;product=TetR family transcriptional regulator;protein_id=TGD33409.1;transl_table=11 PYKI01003446.1 Genbank gene 766 1218 . + . ID=gene-C9F07_34650;Name=C9F07_34650;end_range=1218,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34650;partial=true PYKI01003446.1 Protein Homology CDS 766 1218 . + 0 ID=cds-TGD33410.1;Parent=gene-C9F07_34650;Dbxref=NCBI_GP:TGD33410.1;Name=TGD33410.1;end_range=1218,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=C9F07_34650;partial=true;product=MFS transporter;protein_id=TGD33410.1;transl_table=11 ##sequence-region PYKI01003315.1 1 1218 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003315.1 Genbank region 1 1218 . + . ID=PYKI01003315.1:1..1218;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003315.1 Genbank gene 1 562 . + . ID=gene-C9F07_33350;Name=C9F07_33350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33350;partial=true;start_range=.,1 PYKI01003315.1 Protein Homology CDS 1 562 . + 1 ID=cds-TGD35983.1;Parent=gene-C9F07_33350;Dbxref=NCBI_GP:TGD35983.1;Name=TGD35983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290957.1;locus_tag=C9F07_33350;partial=true;product=integrase;protein_id=TGD35983.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002324.1 1 1218 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002324.1 Genbank region 1 1218 . + . ID=PYKI01002324.1:1..1218;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002324.1 Genbank gene 356 1126 . + . ID=gene-C9F07_22795;Name=C9F07_22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22795 PYKI01002324.1 Protein Homology CDS 356 1126 . + 0 ID=cds-TGD53974.1;Parent=gene-C9F07_22795;Dbxref=NCBI_GP:TGD53974.1;Name=TGD53974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455898.1;locus_tag=C9F07_22795;product=D-alanyl-D-alanine dipeptidase;protein_id=TGD53974.1;transl_table=11 ##sequence-region PYKI01002915.1 1 3977 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002915.1 Genbank region 1 3977 . + . ID=PYKI01002915.1:1..3977;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002915.1 Genbank gene 1 294 . + . ID=gene-C9F07_29195;Name=C9F07_29195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29195;partial=true;start_range=.,1 PYKI01002915.1 Protein Homology CDS 1 294 . + 0 ID=cds-TGD43401.1;Parent=gene-C9F07_29195;Dbxref=NCBI_GP:TGD43401.1;Name=TGD43401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001323959.1;locus_tag=C9F07_29195;partial=true;product=hypothetical protein;protein_id=TGD43401.1;start_range=.,1;transl_table=11 PYKI01002915.1 Genbank gene 190 816 . - . ID=gene-C9F07_29200;Name=C9F07_29200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29200 PYKI01002915.1 Protein Homology CDS 190 816 . - 0 ID=cds-TGD43402.1;Parent=gene-C9F07_29200;Dbxref=NCBI_GP:TGD43402.1;Name=TGD43402.1;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312085.1;locus_tag=C9F07_29200;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase;protein_id=TGD43402.1;transl_table=11 PYKI01002915.1 Genbank gene 943 1236 . + . ID=gene-C9F07_29205;Name=C9F07_29205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29205 PYKI01002915.1 Protein Homology CDS 943 1236 . + 0 ID=cds-TGD43406.1;Parent=gene-C9F07_29205;Dbxref=NCBI_GP:TGD43406.1;Name=TGD43406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=C9F07_29205;product=ribosome assembly RNA-binding protein YhbY;protein_id=TGD43406.1;transl_table=11 PYKI01002915.1 Genbank gene 1392 1868 . - . ID=gene-C9F07_29210;Name=C9F07_29210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29210 PYKI01002915.1 Protein Homology CDS 1392 1868 . - 0 ID=cds-TGD43403.1;Parent=gene-C9F07_29210;Dbxref=NCBI_GP:TGD43403.1;Name=TGD43403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=C9F07_29210;product=transcription elongation factor GreA;protein_id=TGD43403.1;transl_table=11 PYKI01002915.1 Genbank gene 2116 3549 . + . ID=gene-C9F07_29215;Name=C9F07_29215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29215 PYKI01002915.1 Protein Homology CDS 2116 3549 . + 0 ID=cds-TGD43404.1;Parent=gene-C9F07_29215;Dbxref=NCBI_GP:TGD43404.1;Name=TGD43404.1;Note=penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1;locus_tag=C9F07_29215;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=TGD43404.1;transl_table=11 PYKI01002915.1 Genbank gene 3680 3977 . - . ID=gene-C9F07_29220;Name=C9F07_29220;end_range=3977,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29220;partial=true PYKI01002915.1 Protein Homology CDS 3680 3977 . - 1 ID=cds-TGD43405.1;Parent=gene-C9F07_29220;Dbxref=NCBI_GP:TGD43405.1;Name=TGD43405.1;end_range=3977,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457680.1;locus_tag=C9F07_29220;partial=true;product=hypothetical protein;protein_id=TGD43405.1;transl_table=11 ##sequence-region PYKI01001997.1 1 1217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001997.1 Genbank region 1 1217 . + . ID=PYKI01001997.1:1..1217;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001997.1 Genbank pseudogene 67 369 . + . ID=gene-C9F07_19260;Name=C9F07_19260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19260;pseudo=true PYKI01001997.1 Protein Homology CDS 67 369 . + 0 ID=cds-C9F07_19260;Parent=gene-C9F07_19260;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=C9F07_19260;product=aspartate aminotransferase family protein;pseudo=true;transl_table=11 PYKI01001997.1 Genbank gene 460 1217 . - . ID=gene-C9F07_19265;Name=C9F07_19265;end_range=1217,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19265;partial=true PYKI01001997.1 Protein Homology CDS 460 1217 . - 2 ID=cds-TGD60164.1;Parent=gene-C9F07_19265;Dbxref=NCBI_GP:TGD60164.1;Name=TGD60164.1;end_range=1217,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=C9F07_19265;partial=true;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=TGD60164.1;transl_table=11 ##sequence-region PYKI01001973.1 1 1217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001973.1 Genbank region 1 1217 . + . ID=PYKI01001973.1:1..1217;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001973.1 Genbank gene 1 922 . - . ID=gene-C9F07_19020;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=C9F07_19020;partial=true;start_range=.,1 PYKI01001973.1 Protein Homology CDS 1 922 . - 0 ID=cds-TGD60290.1;Parent=gene-C9F07_19020;Dbxref=NCBI_GP:TGD60290.1;Name=TGD60290.1;gbkey=CDS;gene=atpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=C9F07_19020;partial=true;product=F0F1 ATP synthase subunit beta;protein_id=TGD60290.1;start_range=.,1;transl_table=11 PYKI01001973.1 Genbank gene 949 1217 . - . ID=gene-C9F07_19025;Name=C9F07_19025;end_range=1217,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19025;partial=true PYKI01001973.1 Protein Homology CDS 949 1217 . - 2 ID=cds-TGD60291.1;Parent=gene-C9F07_19025;Dbxref=NCBI_GP:TGD60291.1;Name=TGD60291.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;end_range=1217,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077994.1;locus_tag=C9F07_19025;partial=true;product=F0F1 ATP synthase subunit gamma;protein_id=TGD60291.1;transl_table=11 ##sequence-region PYKI01001978.1 1 1216 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001978.1 Genbank region 1 1216 . + . ID=PYKI01001978.1:1..1216;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001978.1 Genbank pseudogene 68 238 . - . ID=gene-C9F07_19070;Name=C9F07_19070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19070;pseudo=true PYKI01001978.1 Protein Homology CDS 68 238 . - 0 ID=cds-C9F07_19070;Parent=gene-C9F07_19070;Note=Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454704.1;locus_tag=C9F07_19070;product=peptidylprolyl isomerase SurA;pseudo=true;transl_table=11 PYKI01001978.1 Genbank gene 292 1216 . - . ID=gene-C9F07_19075;Name=C9F07_19075;end_range=1216,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19075;partial=true PYKI01001978.1 Protein Homology CDS 292 1216 . - 1 ID=cds-TGD60260.1;Parent=gene-C9F07_19075;Dbxref=NCBI_GP:TGD60260.1;Name=TGD60260.1;Note=is involved in outer membrane permeability;end_range=1216,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454705.1;locus_tag=C9F07_19075;partial=true;product=LPS-assembly protein LptD;protein_id=TGD60260.1;transl_table=11 ##sequence-region PYKI01000864.1 1 1216 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000864.1 Genbank region 1 1216 . + . ID=PYKI01000864.1:1..1216;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000864.1 Genbank gene 104 442 . - . ID=gene-C9F07_07925;Name=C9F07_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07925 PYKI01000864.1 Protein Homology CDS 104 442 . - 0 ID=cds-TGE05773.1;Parent=gene-C9F07_07925;Dbxref=NCBI_GP:TGE05773.1;Name=TGE05773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=C9F07_07925;product=nitrogen regulatory protein P-II 1;protein_id=TGE05773.1;transl_table=11 PYKI01000864.1 Genbank gene 519 1216 . - . ID=gene-C9F07_07930;Name=qseF;end_range=1216,.;gbkey=Gene;gene=qseF;gene_biotype=protein_coding;locus_tag=C9F07_07930;partial=true PYKI01000864.1 Protein Homology CDS 519 1216 . - 2 ID=cds-TGE05774.1;Parent=gene-C9F07_07930;Dbxref=NCBI_GP:TGE05774.1;Name=TGE05774.1;end_range=1216,.;gbkey=CDS;gene=qseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457092.1;locus_tag=C9F07_07930;partial=true;product=two-component system response regulator QseF/GlrR;protein_id=TGE05774.1;transl_table=11 ##sequence-region PYKI01002299.1 1 1216 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002299.1 Genbank region 1 1216 . + . ID=PYKI01002299.1:1..1216;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002299.1 Genbank gene 1 346 . - . ID=gene-C9F07_22555;Name=C9F07_22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22555;partial=true;start_range=.,1 PYKI01002299.1 Protein Homology CDS 1 346 . - 0 ID=cds-TGD54532.1;Parent=gene-C9F07_22555;Dbxref=NCBI_GP:TGD54532.1;Name=TGD54532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271805.1;locus_tag=C9F07_22555;partial=true;product=cytoplasmic protein;protein_id=TGD54532.1;start_range=.,1;transl_table=11 PYKI01002299.1 Genbank gene 476 1216 . - . ID=gene-C9F07_22560;Name=C9F07_22560;end_range=1216,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22560;partial=true PYKI01002299.1 Protein Homology CDS 476 1216 . - 0 ID=cds-TGD54533.1;Parent=gene-C9F07_22560;Dbxref=NCBI_GP:TGD54533.1;Name=TGD54533.1;end_range=1216,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457149.3;locus_tag=C9F07_22560;partial=true;product=magnesium/cobalt efflux protein;protein_id=TGD54533.1;transl_table=11 ##sequence-region PYKI01002539.1 1 1216 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002539.1 Genbank region 1 1216 . + . ID=PYKI01002539.1:1..1216;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002539.1 Genbank pseudogene 1 305 . - . ID=gene-C9F07_25185;Name=C9F07_25185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25185;pseudo=true PYKI01002539.1 Protein Homology CDS 1 305 . - 0 ID=cds-C9F07_25185;Parent=gene-C9F07_25185;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456976.1;locus_tag=C9F07_25185;product=sulfate ABC transporter ATP-binding protein;pseudo=true;transl_table=11 PYKI01002539.1 Genbank gene 295 1170 . - . ID=gene-C9F07_25190;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=C9F07_25190 PYKI01002539.1 Protein Homology CDS 295 1170 . - 0 ID=cds-TGD49991.1;Parent=gene-C9F07_25190;Dbxref=NCBI_GP:TGD49991.1;Name=TGD49991.1;gbkey=CDS;gene=cysW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001635056.1;locus_tag=C9F07_25190;product=sulfate ABC transporter permease subunit CysW;protein_id=TGD49991.1;transl_table=11 ##sequence-region PYKI01003295.1 1 1214 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003295.1 Genbank region 1 1214 . + . ID=PYKI01003295.1:1..1214;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003295.1 Genbank gene 1 492 . + . ID=gene-C9F07_33130;Name=C9F07_33130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33130;partial=true;start_range=.,1 PYKI01003295.1 Protein Homology CDS 1 492 . + 0 ID=cds-TGD36070.1;Parent=gene-C9F07_33130;Dbxref=NCBI_GP:TGD36070.1;Name=TGD36070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454923.1;locus_tag=C9F07_33130;partial=true;product=class II glutamine amidotransferase;protein_id=TGD36070.1;start_range=.,1;transl_table=11 PYKI01003295.1 Genbank gene 463 1176 . - . ID=gene-C9F07_33135;Name=C9F07_33135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33135 PYKI01003295.1 Protein Homology CDS 463 1176 . - 0 ID=cds-TGD36071.1;Parent=gene-C9F07_33135;Dbxref=NCBI_GP:TGD36071.1;Name=TGD36071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454924.1;locus_tag=C9F07_33135;product=transpeptidase;protein_id=TGD36071.1;transl_table=11 ##sequence-region PYKI01001646.1 1 1214 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001646.1 Genbank region 1 1214 . + . ID=PYKI01001646.1:1..1214;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001646.1 Genbank gene 217 711 . + . ID=gene-C9F07_15725;Name=C9F07_15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15725 PYKI01001646.1 Protein Homology CDS 217 711 . + 0 ID=cds-TGD70299.1;Parent=gene-C9F07_15725;Dbxref=NCBI_GP:TGD70299.1;Name=TGD70299.1;Note=regulates the expression of the iscRSUA operon;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=C9F07_15725;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=TGD70299.1;transl_table=11 PYKI01001646.1 Genbank gene 892 1214 . + . ID=gene-C9F07_15730;Name=C9F07_15730;end_range=1214,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15730;partial=true PYKI01001646.1 Protein Homology CDS 892 1214 . + 0 ID=cds-TGD70300.1;Parent=gene-C9F07_15730;Dbxref=NCBI_GP:TGD70300.1;Name=TGD70300.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;end_range=1214,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900428.1;locus_tag=C9F07_15730;partial=true;product=IscS subfamily cysteine desulfurase;protein_id=TGD70300.1;transl_table=11 ##sequence-region PYKI01002161.1 1 1213 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002161.1 Genbank region 1 1213 . + . ID=PYKI01002161.1:1..1213;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002161.1 Genbank gene 274 1213 . + . ID=gene-C9F07_20995;Name=C9F07_20995;end_range=1213,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20995;partial=true PYKI01002161.1 Protein Homology CDS 274 1213 . + 0 ID=cds-TGD57225.1;Parent=gene-C9F07_20995;Dbxref=NCBI_GP:TGD57225.1;Name=TGD57225.1;end_range=1213,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455591.1;locus_tag=C9F07_20995;partial=true;product=dipeptidase;protein_id=TGD57225.1;transl_table=11 ##sequence-region PYKI01000557.1 1 1213 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000557.1 Genbank region 1 1213 . + . ID=PYKI01000557.1:1..1213;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000557.1 Genbank pseudogene 1 529 . + . ID=gene-C9F07_04710;Name=C9F07_04710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04710;pseudo=true PYKI01000557.1 Protein Homology CDS 1 529 . + 1 ID=cds-C9F07_04710;Parent=gene-C9F07_04710;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458786.1;locus_tag=C9F07_04710;product=miniconductance mechanosensitive channel MscM;pseudo=true;transl_table=11 PYKI01000557.1 Genbank gene 591 1213 . - . ID=gene-C9F07_04715;Name=C9F07_04715;end_range=1213,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04715;partial=true PYKI01000557.1 Protein Homology CDS 591 1213 . - 2 ID=cds-TGE14941.1;Parent=gene-C9F07_04715;Dbxref=NCBI_GP:TGE14941.1;Name=TGE14941.1;end_range=1213,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458784.1;locus_tag=C9F07_04715;partial=true;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=TGE14941.1;transl_table=11 ##sequence-region PYKI01001670.1 1 1213 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001670.1 Genbank region 1 1213 . + . ID=PYKI01001670.1:1..1213;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001670.1 Genbank gene 1 407 . - . ID=gene-C9F07_15935;Name=C9F07_15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15935;partial=true;start_range=.,1 PYKI01001670.1 Protein Homology CDS 1 407 . - 0 ID=cds-TGD70112.1;Parent=gene-C9F07_15935;Dbxref=NCBI_GP:TGD70112.1;Name=TGD70112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455737.1;locus_tag=C9F07_15935;partial=true;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=TGD70112.1;start_range=.,1;transl_table=11 PYKI01001670.1 Genbank gene 475 660 . + . ID=gene-C9F07_15940;Name=C9F07_15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15940 PYKI01001670.1 Protein Homology CDS 475 660 . + 0 ID=cds-TGD70114.1;Parent=gene-C9F07_15940;Dbxref=NCBI_GP:TGD70114.1;Name=TGD70114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218746.1;locus_tag=C9F07_15940;product=hypothetical protein;protein_id=TGD70114.1;transl_table=11 PYKI01001670.1 Genbank gene 748 1213 . + . ID=gene-C9F07_15945;Name=C9F07_15945;end_range=1213,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15945;partial=true PYKI01001670.1 Protein Homology CDS 748 1213 . + 0 ID=cds-TGD70113.1;Parent=gene-C9F07_15945;Dbxref=NCBI_GP:TGD70113.1;Name=TGD70113.1;end_range=1213,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455738.1;locus_tag=C9F07_15945;partial=true;product=hypothetical protein;protein_id=TGD70113.1;transl_table=11 ##sequence-region PYKI01003574.1 1 1213 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003574.1 Genbank region 1 1213 . + . ID=PYKI01003574.1:1..1213;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003574.1 Genbank gene 119 1003 . - . ID=gene-C9F07_36075;Name=C9F07_36075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36075 PYKI01003574.1 Protein Homology CDS 119 1003 . - 0 ID=cds-TGD30232.1;Parent=gene-C9F07_36075;Dbxref=NCBI_GP:TGD30232.1;Name=TGD30232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461077.1;locus_tag=C9F07_36075;product=cytoplasmic protein;protein_id=TGD30232.1;transl_table=11 ##sequence-region PYKI01002335.1 1 1212 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002335.1 Genbank region 1 1212 . + . ID=PYKI01002335.1:1..1212;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002335.1 Genbank pseudogene 1 1127 . - . ID=gene-C9F07_22895;Name=C9F07_22895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22895;pseudo=true PYKI01002335.1 Protein Homology CDS 1 1127 . - 0 ID=cds-C9F07_22895;Parent=gene-C9F07_22895;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455080.1;locus_tag=C9F07_22895;product=DNA polymerase III subunit gamma/tau;pseudo=true;transl_table=11 ##sequence-region PYKI01002980.1 1 1210 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002980.1 Genbank region 1 1210 . + . ID=PYKI01002980.1:1..1210;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002980.1 Genbank gene 1 169 . - . ID=gene-C9F07_29870;Name=C9F07_29870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29870;partial=true;start_range=.,1 PYKI01002980.1 Protein Homology CDS 1 169 . - 0 ID=cds-TGD41495.1;Parent=gene-C9F07_29870;Dbxref=NCBI_GP:TGD41495.1;Name=TGD41495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457483.1;locus_tag=C9F07_29870;partial=true;product=MFS transporter;protein_id=TGD41495.1;start_range=.,1;transl_table=11 PYKI01002980.1 Genbank gene 662 1210 . - . ID=gene-C9F07_29875;Name=metK;end_range=1210,.;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=C9F07_29875;partial=true PYKI01002980.1 Protein Homology CDS 662 1210 . - 0 ID=cds-TGD41496.1;Parent=gene-C9F07_29875;Dbxref=NCBI_GP:TGD41496.1;Name=TGD41496.1;end_range=1210,.;gbkey=CDS;gene=metK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=C9F07_29875;partial=true;product=methionine adenosyltransferase;protein_id=TGD41496.1;transl_table=11 ##sequence-region PYKI01000973.1 1 1210 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000973.1 Genbank region 1 1210 . + . ID=PYKI01000973.1:1..1210;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000973.1 Genbank gene 6 560 . - . ID=gene-C9F07_08875;Name=C9F07_08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08875 PYKI01000973.1 Protein Homology CDS 6 560 . - 0 ID=cds-TGD99983.1;Parent=gene-C9F07_08875;Dbxref=NCBI_GP:TGD99983.1;Name=TGD99983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456888.1;locus_tag=C9F07_08875;product=NUDIX hydrolase;protein_id=TGD99983.1;transl_table=11 PYKI01000973.1 Genbank gene 617 1168 . - . ID=gene-C9F07_08880;Name=C9F07_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08880 PYKI01000973.1 Protein Homology CDS 617 1168 . - 0 ID=cds-TGD99984.1;Parent=gene-C9F07_08880;Dbxref=NCBI_GP:TGD99984.1;Name=TGD99984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456889.1;locus_tag=C9F07_08880;product=phosphodiesterase;protein_id=TGD99984.1;transl_table=11 ##sequence-region PYKI01003429.1 1 1209 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003429.1 Genbank region 1 1209 . + . ID=PYKI01003429.1:1..1209;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003429.1 Genbank gene 550 1209 . + . ID=gene-C9F07_34455;Name=C9F07_34455;end_range=1209,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34455;partial=true PYKI01003429.1 Protein Homology CDS 550 1209 . + 0 ID=cds-TGD33555.1;Parent=gene-C9F07_34455;Dbxref=NCBI_GP:TGD33555.1;Name=TGD33555.1;end_range=1209,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=C9F07_34455;partial=true;product=DUF1471 domain-containing protein;protein_id=TGD33555.1;transl_table=11 ##sequence-region PYKI01002488.1 1 1207 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002488.1 Genbank region 1 1207 . + . ID=PYKI01002488.1:1..1207;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002488.1 Genbank gene 1 321 . - . ID=gene-C9F07_24605;Name=C9F07_24605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24605;partial=true;start_range=.,1 PYKI01002488.1 Protein Homology CDS 1 321 . - 0 ID=cds-TGD50400.1;Parent=gene-C9F07_24605;Dbxref=NCBI_GP:TGD50400.1;Name=TGD50400.1;Note=rotamase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=C9F07_24605;partial=true;product=FKBP-type peptidyl-prolyl cis-trans isomerase FkpA;protein_id=TGD50400.1;start_range=.,1;transl_table=11 PYKI01002488.1 Genbank gene 550 759 . + . ID=gene-C9F07_24610;Name=C9F07_24610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24610 PYKI01002488.1 Protein Homology CDS 550 759 . + 0 ID=cds-TGD50401.1;Parent=gene-C9F07_24610;Dbxref=NCBI_GP:TGD50401.1;Name=TGD50401.1;Note=required for phi X174 lysis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=C9F07_24610;product=lysis protein;protein_id=TGD50401.1;transl_table=11 PYKI01002488.1 Genbank gene 778 957 . - . ID=gene-C9F07_24615;Name=C9F07_24615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24615 PYKI01002488.1 Protein Homology CDS 778 957 . - 0 ID=cds-TGD50402.1;Parent=gene-C9F07_24615;Dbxref=NCBI_GP:TGD50402.1;Name=TGD50402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001925745.1;locus_tag=C9F07_24615;product=hypothetical protein;protein_id=TGD50402.1;transl_table=11 PYKI01002488.1 Genbank gene 948 1207 . - . ID=gene-C9F07_24620;Name=C9F07_24620;end_range=1207,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24620;partial=true PYKI01002488.1 Protein Homology CDS 948 1207 . - 2 ID=cds-TGD50403.1;Parent=gene-C9F07_24620;Dbxref=NCBI_GP:TGD50403.1;Name=TGD50403.1;Note=rotamase;end_range=1207,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=C9F07_24620;partial=true;product=peptidylprolyl isomerase;protein_id=TGD50403.1;transl_table=11 ##sequence-region PYKI01003215.1 1 1207 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003215.1 Genbank region 1 1207 . + . ID=PYKI01003215.1:1..1207;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003215.1 Genbank gene 1 402 . + . ID=gene-C9F07_32360;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=C9F07_32360;partial=true;start_range=.,1 PYKI01003215.1 Protein Homology CDS 1 402 . + 0 ID=cds-TGD36918.1;Parent=gene-C9F07_32360;Dbxref=NCBI_GP:TGD36918.1;Name=TGD36918.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum;gbkey=CDS;gene=flgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455674.1;locus_tag=C9F07_32360;partial=true;product=flagellar biosynthesis protein FlgA;protein_id=TGD36918.1;start_range=.,1;transl_table=11 PYKI01003215.1 Genbank gene 402 1207 . + . ID=gene-C9F07_32365;Name=flgJ;end_range=1207,.;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=C9F07_32365;partial=true PYKI01003215.1 Protein Homology CDS 402 1207 . + 0 ID=cds-TGD36919.1;Parent=gene-C9F07_32365;Dbxref=NCBI_GP:TGD36919.1;Name=TGD36919.1;Note=Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space;end_range=1207,.;gbkey=CDS;gene=flgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455675.1;locus_tag=C9F07_32365;partial=true;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=TGD36919.1;transl_table=11 ##sequence-region PYKI01001022.1 1 1205 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001022.1 Genbank region 1 1205 . + . ID=PYKI01001022.1:1..1205;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001022.1 Genbank gene 1 614 . - . ID=gene-C9F07_09415;Name=C9F07_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09415;partial=true;start_range=.,1 PYKI01001022.1 Protein Homology CDS 1 614 . - 0 ID=cds-TGD97325.1;Parent=gene-C9F07_09415;Dbxref=NCBI_GP:TGD97325.1;Name=TGD97325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458582.1;locus_tag=C9F07_09415;partial=true;product=glutamate/aspartate:proton symporter GltP;protein_id=TGD97325.1;start_range=.,1;transl_table=11 PYKI01001022.1 Genbank gene 959 1205 . - . ID=gene-C9F07_09420;Name=C9F07_09420;end_range=1205,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09420;partial=true PYKI01001022.1 Protein Homology CDS 959 1205 . - 1 ID=cds-TGD97326.1;Parent=gene-C9F07_09420;Dbxref=NCBI_GP:TGD97326.1;Name=TGD97326.1;end_range=1205,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=C9F07_09420;partial=true;product=heme lysase NrfEFG subunit NrfG;protein_id=TGD97326.1;transl_table=11 ##sequence-region PYKI01002716.1 1 1204 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002716.1 Genbank region 1 1204 . + . ID=PYKI01002716.1:1..1204;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002716.1 Genbank pseudogene 50 1021 . - . ID=gene-C9F07_27090;Name=treF;gbkey=Gene;gene=treF;gene_biotype=pseudogene;locus_tag=C9F07_27090;pseudo=true PYKI01002716.1 Protein Homology CDS 50 1021 . - 0 ID=cds-C9F07_27090;Parent=gene-C9F07_27090;Note=cytoplasmic%3B catalyzes the hydrolysis of trehalose to glucose%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=treF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=C9F07_27090;product=alpha%2Calpha-trehalase;pseudo=true;transl_table=11 ##sequence-region PYKI01002365.1 1 3971 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002365.1 Genbank region 1 3971 . + . ID=PYKI01002365.1:1..3971;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002365.1 Genbank gene 1 756 . + . ID=gene-C9F07_23250;Name=C9F07_23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23250;partial=true;start_range=.,1 PYKI01002365.1 Protein Homology CDS 1 756 . + 0 ID=cds-TGD52939.1;Parent=gene-C9F07_23250;Dbxref=NCBI_GP:TGD52939.1;Name=TGD52939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000002494.1;locus_tag=C9F07_23250;partial=true;product=LysR family transcriptional regulator;protein_id=TGD52939.1;start_range=.,1;transl_table=11 PYKI01002365.1 Genbank gene 919 2154 . + . ID=gene-C9F07_23255;Name=C9F07_23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23255 PYKI01002365.1 Protein Homology CDS 919 2154 . + 0 ID=cds-TGD52940.1;Parent=gene-C9F07_23255;Dbxref=NCBI_GP:TGD52940.1;Name=TGD52940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=C9F07_23255;product=phosphoadenosine phosphosulfate reductase;protein_id=TGD52940.1;transl_table=11 PYKI01002365.1 Genbank gene 2127 2744 . + . ID=gene-C9F07_23260;Name=C9F07_23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23260 PYKI01002365.1 Protein Homology CDS 2127 2744 . + 0 ID=cds-TGD52941.1;Parent=gene-C9F07_23260;Dbxref=NCBI_GP:TGD52941.1;Name=TGD52941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=C9F07_23260;product=hypothetical protein;protein_id=TGD52941.1;transl_table=11 PYKI01002365.1 Genbank gene 2745 3905 . - . ID=gene-C9F07_23265;Name=C9F07_23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23265 PYKI01002365.1 Protein Homology CDS 2745 3905 . - 0 ID=cds-TGD52942.1;Parent=gene-C9F07_23265;Dbxref=NCBI_GP:TGD52942.1;Name=TGD52942.1;Note=catalyzes the transfer of an amino moiety%3B preference for methionine followed by histidine and phenylalanine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=C9F07_23265;product=pyridoxal phosphate-dependent aminotransferase;protein_id=TGD52942.1;transl_table=11 ##sequence-region PYKI01002759.1 1 1203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002759.1 Genbank region 1 1203 . + . ID=PYKI01002759.1:1..1203;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002759.1 Genbank gene 1 135 . + . ID=gene-C9F07_27525;Name=C9F07_27525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27525;partial=true;start_range=.,1 PYKI01002759.1 Protein Homology CDS 1 135 . + 0 ID=cds-TGD46753.1;Parent=gene-C9F07_27525;Dbxref=NCBI_GP:TGD46753.1;Name=TGD46753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=C9F07_27525;partial=true;product=sirohydrochlorin cobaltochelatase;protein_id=TGD46753.1;start_range=.,1;transl_table=11 PYKI01002759.1 Genbank gene 132 845 . + . ID=gene-C9F07_27530;Name=C9F07_27530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27530 PYKI01002759.1 Protein Homology CDS 132 845 . + 0 ID=cds-TGD46754.1;Parent=gene-C9F07_27530;Dbxref=NCBI_GP:TGD46754.1;Name=TGD46754.1;Note=catalyzes the formation of precorrin-3A from precorrin-2;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=C9F07_27530;product=cobalt-precorrin-2 C(20)-methyltransferase;protein_id=TGD46754.1;transl_table=11 PYKI01002759.1 Genbank gene 842 1203 . + . ID=gene-C9F07_27535;Name=C9F07_27535;end_range=1203,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27535;partial=true PYKI01002759.1 Protein Homology CDS 842 1203 . + 0 ID=cds-TGD46755.1;Parent=gene-C9F07_27535;Dbxref=NCBI_GP:TGD46755.1;Name=TGD46755.1;end_range=1203,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=C9F07_27535;partial=true;product=cobalamin biosynthesis protein CbiM;protein_id=TGD46755.1;transl_table=11 ##sequence-region PYKI01002343.1 1 1203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002343.1 Genbank region 1 1203 . + . ID=PYKI01002343.1:1..1203;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002343.1 Genbank gene 1 193 . + . ID=gene-C9F07_23030;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=C9F07_23030;partial=true;start_range=.,1 PYKI01002343.1 Protein Homology CDS 1 193 . + 1 ID=cds-TGD53501.1;Parent=gene-C9F07_23030;Dbxref=NCBI_GP:TGD53501.1;Name=TGD53501.1;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;gbkey=CDS;gene=glnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=C9F07_23030;partial=true;product=glutamine synthetase;protein_id=TGD53501.1;start_range=.,1;transl_table=11 PYKI01002343.1 Genbank gene 337 516 . + . ID=gene-C9F07_23035;Name=C9F07_23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23035 PYKI01002343.1 Protein Homology CDS 337 516 . + 0 ID=cds-TGD53502.1;Parent=gene-C9F07_23035;Dbxref=NCBI_GP:TGD53502.1;Name=TGD53502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534586.1;locus_tag=C9F07_23035;product=hypothetical protein;protein_id=TGD53502.1;transl_table=11 PYKI01002343.1 Genbank gene 468 1203 . + . ID=gene-C9F07_23040;Name=C9F07_23040;end_range=1203,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23040;partial=true PYKI01002343.1 Protein Homology CDS 468 1203 . + 0 ID=cds-TGD53503.1;Parent=gene-C9F07_23040;Dbxref=NCBI_GP:TGD53503.1;Name=TGD53503.1;end_range=1203,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458043.1;locus_tag=C9F07_23040;partial=true;product=nitrogen regulation protein NR(II);protein_id=TGD53503.1;transl_table=11 ##sequence-region PYKI01002449.1 1 1201 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002449.1 Genbank region 1 1201 . + . ID=PYKI01002449.1:1..1201;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002449.1 Genbank gene 1 873 . + . ID=gene-C9F07_24205;Name=C9F07_24205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24205;partial=true;start_range=.,1 PYKI01002449.1 Protein Homology CDS 1 873 . + 0 ID=cds-TGD50905.1;Parent=gene-C9F07_24205;Dbxref=NCBI_GP:TGD50905.1;Name=TGD50905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456881.1;locus_tag=C9F07_24205;partial=true;product=putative basic amino acid antiporter YfcC;protein_id=TGD50905.1;start_range=.,1;transl_table=11 PYKI01002449.1 Genbank pseudogene 922 1176 . - . ID=gene-C9F07_24210;Name=C9F07_24210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24210;pseudo=true PYKI01002449.1 Protein Homology CDS 922 1176 . - 0 ID=cds-C9F07_24210;Parent=gene-C9F07_24210;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456882.1;locus_tag=C9F07_24210;product=transketolase;pseudo=true;transl_table=11 ##sequence-region PYKI01002828.1 1 1200 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002828.1 Genbank region 1 1200 . + . ID=PYKI01002828.1:1..1200;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002828.1 Genbank gene 1 196 . + . ID=gene-C9F07_28290;Name=C9F07_28290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28290;partial=true;start_range=.,1 PYKI01002828.1 Protein Homology CDS 1 196 . + 1 ID=cds-TGD45606.1;Parent=gene-C9F07_28290;Dbxref=NCBI_GP:TGD45606.1;Name=TGD45606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457587.1;locus_tag=C9F07_28290;partial=true;product=hypothetical protein;protein_id=TGD45606.1;start_range=.,1;transl_table=11 PYKI01002828.1 Genbank gene 270 479 . - . ID=gene-C9F07_28295;Name=C9F07_28295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28295 PYKI01002828.1 Protein Homology CDS 270 479 . - 0 ID=cds-TGD45607.1;Parent=gene-C9F07_28295;Dbxref=NCBI_GP:TGD45607.1;Name=TGD45607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=C9F07_28295;product=cell surface composition regulator GlgS;protein_id=TGD45607.1;transl_table=11 PYKI01002828.1 Genbank gene 737 1200 . + . ID=gene-C9F07_28300;Name=C9F07_28300;end_range=1200,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28300;partial=true PYKI01002828.1 Protein Homology CDS 737 1200 . + 0 ID=cds-TGD45608.1;Parent=gene-C9F07_28300;Dbxref=NCBI_GP:TGD45608.1;Name=TGD45608.1;end_range=1200,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=C9F07_28300;partial=true;product=hypothetical protein;protein_id=TGD45608.1;transl_table=11 ##sequence-region PYKI01002944.1 1 1200 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002944.1 Genbank region 1 1200 . + . ID=PYKI01002944.1:1..1200;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002944.1 Genbank gene 1 317 . - . ID=gene-C9F07_29495;Name=C9F07_29495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29495;partial=true;start_range=.,1 PYKI01002944.1 Protein Homology CDS 1 317 . - 0 ID=cds-TGD42322.1;Parent=gene-C9F07_29495;Dbxref=NCBI_GP:TGD42322.1;Name=TGD42322.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=C9F07_29495;partial=true;product=adenine phosphoribosyltransferase;protein_id=TGD42322.1;start_range=.,1;transl_table=11 PYKI01002944.1 Genbank gene 385 492 . - . ID=gene-C9F07_29500;Name=C9F07_29500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29500 PYKI01002944.1 Protein Homology CDS 385 492 . - 0 ID=cds-TGD42323.1;Parent=gene-C9F07_29500;Dbxref=NCBI_GP:TGD42323.1;Name=TGD42323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805029.1;locus_tag=C9F07_29500;product=adenine phosphoribosyltransferase;protein_id=TGD42323.1;transl_table=11 PYKI01002944.1 Genbank gene 470 847 . - . ID=gene-C9F07_29505;Name=C9F07_29505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29505 PYKI01002944.1 Protein Homology CDS 470 847 . - 0 ID=cds-TGD42325.1;Parent=gene-C9F07_29505;Dbxref=NCBI_GP:TGD42325.1;Name=TGD42325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455078.1;locus_tag=C9F07_29505;product=hypothetical protein;protein_id=TGD42325.1;transl_table=11 PYKI01002944.1 Genbank gene 928 1200 . + . ID=gene-C9F07_29510;Name=C9F07_29510;end_range=1200,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29510;partial=true PYKI01002944.1 Protein Homology CDS 928 1200 . + 0 ID=cds-TGD42324.1;Parent=gene-C9F07_29510;Dbxref=NCBI_GP:TGD42324.1;Name=TGD42324.1;Note=PriC%3B protein involved in DNA replication%3B part of the primosome%2C a protein complex required to restart stalled replication forks%3B binds the complex formed by PriA%2C PriB and DNA%3B PriC-dependent primosome requires a gap to restart DNA replication%3B stimulates Rep activity at stalled forks;end_range=1200,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459476.1;locus_tag=C9F07_29510;partial=true;product=primosomal replication protein N'';protein_id=TGD42324.1;transl_table=11 ##sequence-region PYKI01000387.1 1 1199 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000387.1 Genbank region 1 1199 . + . ID=PYKI01000387.1:1..1199;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000387.1 Genbank gene 1 1199 . + . ID=gene-C9F07_02930;Name=C9F07_02930;end_range=1199,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02930;partial=true;start_range=.,1 PYKI01000387.1 Protein Homology CDS 1 1199 . + 1 ID=cds-TGE22785.1;Parent=gene-C9F07_02930;Dbxref=NCBI_GP:TGE22785.1;Name=TGE22785.1;end_range=1199,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=C9F07_02930;partial=true;product=chemotaxis protein CheA;protein_id=TGE22785.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002240.1 1 1198 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002240.1 Genbank region 1 1198 . + . ID=PYKI01002240.1:1..1198;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002240.1 Genbank gene 1 423 . - . ID=gene-C9F07_21890;Name=C9F07_21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21890;partial=true;start_range=.,1 PYKI01002240.1 Protein Homology CDS 1 423 . - 0 ID=cds-TGD55970.1;Parent=gene-C9F07_21890;Dbxref=NCBI_GP:TGD55970.1;Name=TGD55970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457621.1;locus_tag=C9F07_21890;partial=true;product=DoxX family protein;protein_id=TGD55970.1;start_range=.,1;transl_table=11 PYKI01002240.1 Genbank gene 578 877 . - . ID=gene-C9F07_21895;Name=C9F07_21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21895 PYKI01002240.1 Protein Homology CDS 578 877 . - 0 ID=cds-TGD55971.1;Parent=gene-C9F07_21895;Dbxref=NCBI_GP:TGD55971.1;Name=TGD55971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457620.1;locus_tag=C9F07_21895;product=hypothetical protein;protein_id=TGD55971.1;transl_table=11 PYKI01002240.1 Genbank gene 874 1198 . - . ID=gene-C9F07_21900;Name=C9F07_21900;end_range=1198,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21900;partial=true PYKI01002240.1 Protein Homology CDS 874 1198 . - 1 ID=cds-TGD55972.1;Parent=gene-C9F07_21900;Dbxref=NCBI_GP:TGD55972.1;Name=TGD55972.1;end_range=1198,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457619.1;locus_tag=C9F07_21900;partial=true;product=hypothetical protein;protein_id=TGD55972.1;transl_table=11 ##sequence-region PYKI01002266.1 1 1198 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002266.1 Genbank region 1 1198 . + . ID=PYKI01002266.1:1..1198;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002266.1 Genbank gene 249 617 . + . ID=gene-C9F07_22180;Name=C9F07_22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22180 PYKI01002266.1 Protein Homology CDS 249 617 . + 0 ID=cds-TGD55361.1;Parent=gene-C9F07_22180;Dbxref=NCBI_GP:TGD55361.1;Name=TGD55361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456155.1;locus_tag=C9F07_22180;product=Fe-S cluster assembly scaffold SufA;protein_id=TGD55361.1;transl_table=11 PYKI01002266.1 Genbank pseudogene 626 1087 . + . ID=gene-C9F07_22185;Name=C9F07_22185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22185;pseudo=true PYKI01002266.1 Protein Homology CDS 626 1087 . + 0 ID=cds-C9F07_22185;Parent=gene-C9F07_22185;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=C9F07_22185;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002070.1 1 1198 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002070.1 Genbank region 1 1198 . + . ID=PYKI01002070.1:1..1198;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002070.1 Genbank gene 1 473 . - . ID=gene-C9F07_20055;Name=C9F07_20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20055;partial=true;start_range=.,1 PYKI01002070.1 Protein Homology CDS 1 473 . - 0 ID=cds-TGD59335.1;Parent=gene-C9F07_20055;Dbxref=NCBI_GP:TGD59335.1;Name=TGD59335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=C9F07_20055;partial=true;product=hypothetical protein;protein_id=TGD59335.1;start_range=.,1;transl_table=11 PYKI01002070.1 Genbank gene 489 854 . - . ID=gene-C9F07_20060;Name=C9F07_20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20060 PYKI01002070.1 Protein Homology CDS 489 854 . - 0 ID=cds-TGD59336.1;Parent=gene-C9F07_20060;Dbxref=NCBI_GP:TGD59336.1;Name=TGD59336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=C9F07_20060;product=cell division protein FtsL;protein_id=TGD59336.1;transl_table=11 PYKI01002070.1 Genbank gene 851 1198 . - . ID=gene-C9F07_20065;Name=mraW;end_range=1198,.;gbkey=Gene;gene=mraW;gene_biotype=protein_coding;locus_tag=C9F07_20065;partial=true PYKI01002070.1 Protein Homology CDS 851 1198 . - 0 ID=cds-TGD59337.1;Parent=gene-C9F07_20065;Dbxref=NCBI_GP:TGD59337.1;Name=TGD59337.1;end_range=1198,.;gbkey=CDS;gene=mraW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=C9F07_20065;partial=true;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase;protein_id=TGD59337.1;transl_table=11 ##sequence-region PYKI01001593.1 1 1197 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001593.1 Genbank region 1 1197 . + . ID=PYKI01001593.1:1..1197;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001593.1 Genbank gene 57 749 . + . ID=gene-C9F07_15220;Name=C9F07_15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15220 PYKI01001593.1 Protein Homology CDS 57 749 . + 0 ID=cds-TGD71997.1;Parent=gene-C9F07_15220;Dbxref=NCBI_GP:TGD71997.1;Name=TGD71997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455463.1;locus_tag=C9F07_15220;product=DUF421 domain-containing protein;protein_id=TGD71997.1;transl_table=11 PYKI01001593.1 Genbank gene 935 1197 . + . ID=gene-C9F07_15225;Name=C9F07_15225;end_range=1197,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15225;partial=true PYKI01001593.1 Protein Homology CDS 935 1197 . + 0 ID=cds-TGD71998.1;Parent=gene-C9F07_15225;Dbxref=NCBI_GP:TGD71998.1;Name=TGD71998.1;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;end_range=1197,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455464.1;locus_tag=C9F07_15225;partial=true;product=phosphoserine transaminase;protein_id=TGD71998.1;transl_table=11 ##sequence-region PYKI01003101.1 1 3967 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003101.1 Genbank region 1 3967 . + . ID=PYKI01003101.1:1..3967;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003101.1 Genbank pseudogene 1 575 . + . ID=gene-C9F07_31040;Name=C9F07_31040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31040;pseudo=true PYKI01003101.1 Protein Homology CDS 1 575 . + 2 ID=cds-C9F07_31040;Parent=gene-C9F07_31040;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=C9F07_31040;product=metal-dependent hydrolase;pseudo=true;transl_table=11 PYKI01003101.1 Genbank gene 608 1471 . - . ID=gene-C9F07_31045;Name=yjjW;gbkey=Gene;gene=yjjW;gene_biotype=protein_coding;locus_tag=C9F07_31045 PYKI01003101.1 Protein Homology CDS 608 1471 . - 0 ID=cds-TGD39788.1;Parent=gene-C9F07_31045;Dbxref=NCBI_GP:TGD39788.1;Name=TGD39788.1;gbkey=CDS;gene=yjjW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=C9F07_31045;product=YjjW family glycine radical enzyme activase;protein_id=TGD39788.1;transl_table=11 PYKI01003101.1 Genbank gene 1443 2993 . - . ID=gene-C9F07_31050;Name=C9F07_31050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31050 PYKI01003101.1 Protein Homology CDS 1443 2993 . - 0 ID=cds-TGD39789.1;Parent=gene-C9F07_31050;Dbxref=NCBI_GP:TGD39789.1;Name=TGD39789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458978.1;locus_tag=C9F07_31050;product=YjjI family glycine radical enzyme;protein_id=TGD39789.1;transl_table=11 PYKI01003101.1 Genbank gene 3235 3967 . + . ID=gene-C9F07_31055;Name=C9F07_31055;end_range=3967,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31055;partial=true PYKI01003101.1 Protein Homology CDS 3235 3967 . + 0 ID=cds-TGD39790.1;Parent=gene-C9F07_31055;Dbxref=NCBI_GP:TGD39790.1;Name=TGD39790.1;end_range=3967,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463423.1;locus_tag=C9F07_31055;partial=true;product=deoxyribose-phosphate aldolase;protein_id=TGD39790.1;transl_table=11 ##sequence-region PYKI01000498.1 1 1197 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000498.1 Genbank region 1 1197 . + . ID=PYKI01000498.1:1..1197;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000498.1 Genbank gene 61 1197 . + . ID=gene-C9F07_04035;Name=C9F07_04035;end_range=1197,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04035;partial=true PYKI01000498.1 Protein Homology CDS 61 1197 . + 0 ID=cds-TGE17517.1;Parent=gene-C9F07_04035;Dbxref=NCBI_GP:TGE17517.1;Name=TGE17517.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;end_range=1197,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574040.1;locus_tag=C9F07_04035;partial=true;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=TGE17517.1;transl_table=11 ##sequence-region PYKI01000110.1 1 1194 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000110.1 Genbank region 1 1194 . + . ID=PYKI01000110.1:1..1194;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000110.1 Genbank gene 1 551 . - . ID=gene-C9F07_00690;Name=C9F07_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00690;partial=true;start_range=.,1 PYKI01000110.1 Protein Homology CDS 1 551 . - 0 ID=cds-TGE30127.1;Parent=gene-C9F07_00690;Dbxref=NCBI_GP:TGE30127.1;Name=TGE30127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=C9F07_00690;partial=true;product=DNA topoisomerase I;protein_id=TGE30127.1;start_range=.,1;transl_table=11 PYKI01000110.1 Genbank pseudogene 794 976 . - . ID=gene-C9F07_00695;Name=C9F07_00695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00695;pseudo=true PYKI01000110.1 Protein Homology CDS 794 976 . - 0 ID=cds-C9F07_00695;Parent=gene-C9F07_00695;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001327904.1;locus_tag=C9F07_00695;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000110.1 Genbank gene 954 1194 . + . ID=gene-C9F07_00700;Name=C9F07_00700;end_range=1194,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00700;partial=true PYKI01000110.1 Protein Homology CDS 954 1194 . + 0 ID=cds-TGE30128.1;Parent=gene-C9F07_00700;Dbxref=NCBI_GP:TGE30128.1;Name=TGE30128.1;end_range=1194,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455782.1;locus_tag=C9F07_00700;partial=true;product=hypothetical protein;protein_id=TGE30128.1;transl_table=11 ##sequence-region PYKI01001367.1 1 1188 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001367.1 Genbank region 1 1188 . + . ID=PYKI01001367.1:1..1188;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001367.1 Genbank gene 1 977 . + . ID=gene-C9F07_12855;Name=C9F07_12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12855;partial=true;start_range=.,1 PYKI01001367.1 Protein Homology CDS 1 977 . + 2 ID=cds-TGD84777.1;Parent=gene-C9F07_12855;Dbxref=NCBI_GP:TGD84777.1;Name=TGD84777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=C9F07_12855;partial=true;product=lipopolysaccharide assembly protein LapB;protein_id=TGD84777.1;start_range=.,1;transl_table=11 PYKI01001367.1 Genbank gene 1108 1188 . + . ID=gene-C9F07_12860;Name=C9F07_12860;end_range=1188,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12860;partial=true PYKI01001367.1 Protein Homology CDS 1108 1188 . + 0 ID=cds-TGD84778.1;Parent=gene-C9F07_12860;Dbxref=NCBI_GP:TGD84778.1;Name=TGD84778.1;end_range=1188,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784928.1;locus_tag=C9F07_12860;partial=true;product=orotidine-5'-phosphate decarboxylase;protein_id=TGD84778.1;transl_table=11 ##sequence-region PYKI01003471.1 1 1187 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003471.1 Genbank region 1 1187 . + . ID=PYKI01003471.1:1..1187;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003471.1 Genbank gene 1 324 . - . ID=gene-C9F07_34900;Name=C9F07_34900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34900;partial=true;start_range=.,1 PYKI01003471.1 Protein Homology CDS 1 324 . - 0 ID=cds-TGD32882.1;Parent=gene-C9F07_34900;Dbxref=NCBI_GP:TGD32882.1;Name=TGD32882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=C9F07_34900;partial=true;product=Zn(2+)-responsive transcriptional regulator;protein_id=TGD32882.1;start_range=.,1;transl_table=11 PYKI01003471.1 Genbank gene 335 703 . - . ID=gene-C9F07_34905;Name=C9F07_34905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34905 PYKI01003471.1 Protein Homology CDS 335 703 . - 0 ID=cds-TGD32883.1;Parent=gene-C9F07_34905;Dbxref=NCBI_GP:TGD32883.1;Name=TGD32883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=C9F07_34905;product=DUF1992 domain-containing protein;protein_id=TGD32883.1;transl_table=11 PYKI01003471.1 Genbank gene 811 1187 . - . ID=gene-C9F07_34910;Name=rplQ;end_range=1187,.;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=C9F07_34910;partial=true PYKI01003471.1 Protein Homology CDS 811 1187 . - 2 ID=cds-TGD32884.1;Parent=gene-C9F07_34910;Dbxref=NCBI_GP:TGD32884.1;Name=TGD32884.1;end_range=1187,.;gbkey=CDS;gene=rplQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458486.1;locus_tag=C9F07_34910;partial=true;product=50S ribosomal protein L17;protein_id=TGD32884.1;transl_table=11 ##sequence-region PYKI01003305.1 1 1187 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003305.1 Genbank region 1 1187 . + . ID=PYKI01003305.1:1..1187;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003305.1 Genbank gene 1 246 . - . ID=gene-C9F07_33245;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=C9F07_33245;partial=true;start_range=.,1 PYKI01003305.1 Protein Homology CDS 1 246 . - 0 ID=cds-TGD36026.1;Parent=gene-C9F07_33245;Dbxref=NCBI_GP:TGD36026.1;Name=TGD36026.1;Note=FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457770.1;locus_tag=C9F07_33245;partial=true;product=acetyl-CoA C-acyltransferase;protein_id=TGD36026.1;start_range=.,1;transl_table=11 PYKI01003305.1 Genbank gene 256 1187 . - . ID=gene-C9F07_33250;Name=fadB;end_range=1187,.;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=C9F07_33250;partial=true PYKI01003305.1 Protein Homology CDS 256 1187 . - 2 ID=cds-TGD36027.1;Parent=gene-C9F07_33250;Dbxref=NCBI_GP:TGD36027.1;Name=TGD36027.1;Note=includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;end_range=1187,.;gbkey=CDS;gene=fadB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001490315.1;locus_tag=C9F07_33250;partial=true;product=fatty acid oxidation complex subunit alpha FadB;protein_id=TGD36027.1;transl_table=11 ##sequence-region PYKI01000709.1 1 1187 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000709.1 Genbank region 1 1187 . + . ID=PYKI01000709.1:1..1187;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000709.1 Genbank gene 138 1187 . + . ID=gene-C9F07_06220;Name=C9F07_06220;end_range=1187,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06220;partial=true PYKI01000709.1 Protein Homology CDS 138 1187 . + 0 ID=cds-TGE11304.1;Parent=gene-C9F07_06220;Dbxref=NCBI_GP:TGE11304.1;Name=TGE11304.1;end_range=1187,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=C9F07_06220;partial=true;product=aromatic amino acid aminotransferase;protein_id=TGE11304.1;transl_table=11 ##sequence-region PYKI01003371.1 1 1187 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003371.1 Genbank region 1 1187 . + . ID=PYKI01003371.1:1..1187;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003371.1 Genbank gene 1 332 . - . ID=gene-C9F07_33960;Name=C9F07_33960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33960;partial=true;start_range=.,1 PYKI01003371.1 Protein Homology CDS 1 332 . - 0 ID=cds-TGD34457.1;Parent=gene-C9F07_33960;Dbxref=NCBI_GP:TGD34457.1;Name=TGD34457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456662.1;locus_tag=C9F07_33960;partial=true;product=tyrosine-protein kinase;protein_id=TGD34457.1;start_range=.,1;transl_table=11 PYKI01003371.1 Genbank gene 329 778 . - . ID=gene-C9F07_33965;Name=C9F07_33965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33965 PYKI01003371.1 Protein Homology CDS 329 778 . - 0 ID=cds-TGD34458.1;Parent=gene-C9F07_33965;Dbxref=NCBI_GP:TGD34458.1;Name=TGD34458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=C9F07_33965;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=TGD34458.1;transl_table=11 PYKI01003371.1 Genbank pseudogene 784 1187 . - . ID=gene-C9F07_33970;Name=C9F07_33970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33970;pseudo=true PYKI01003371.1 Protein Homology CDS 784 1187 . - 2 ID=cds-C9F07_33970;Parent=gene-C9F07_33970;Note=required for the translocation of capsular polysaccharide through the outer membrane%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=C9F07_33970;product=polysaccharide export protein Wza;pseudo=true;transl_table=11 ##sequence-region PYKI01000765.1 1 1187 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000765.1 Genbank region 1 1187 . + . ID=PYKI01000765.1:1..1187;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000765.1 Genbank pseudogene 24 1091 . + . ID=gene-C9F07_06750;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=pseudogene;gene_synonym=yahU;locus_tag=C9F07_06750;pseudo=true PYKI01000765.1 Protein Homology CDS 24 1091 . + 0 ID=cds-C9F07_06750;Parent=gene-C9F07_06750;Note=catalyzes the formation of propionyl-CoA using propionate as a substrate%3B PrpE from Ralstonia solanacearum can produce acetyl-%2C propionyl-%2C butyryl- and acrylyl-coenzyme A%2C and Salmonella enterica produces propionyl- and butyryl-coenzyme A%3B not expressed in Escherichia coli when grown on propionate/minimal media%3B ATP-dependent%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=prpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454966.1;locus_tag=C9F07_06750;product=propionyl-CoA synthetase;pseudo=true;transl_table=11 ##sequence-region PYKI01001762.1 1 1187 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001762.1 Genbank region 1 1187 . + . ID=PYKI01001762.1:1..1187;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001762.1 Genbank gene 1 1187 . + . ID=gene-C9F07_16915;Name=C9F07_16915;end_range=1187,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16915;partial=true;start_range=.,1 PYKI01001762.1 Protein Homology CDS 1 1187 . + 2 ID=cds-TGD67995.1;Parent=gene-C9F07_16915;Dbxref=NCBI_GP:TGD67995.1;Name=TGD67995.1;end_range=1187,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455645.1;locus_tag=C9F07_16915;partial=true;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=TGD67995.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000678.1 1 1186 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000678.1 Genbank region 1 1186 . + . ID=PYKI01000678.1:1..1186;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000678.1 Genbank gene 1 262 . + . ID=gene-C9F07_05895;Name=C9F07_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05895;partial=true;start_range=.,1 PYKI01000678.1 Protein Homology CDS 1 262 . + 1 ID=cds-TGE11593.1;Parent=gene-C9F07_05895;Dbxref=NCBI_GP:TGE11593.1;Name=TGE11593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=C9F07_05895;partial=true;product=hypothetical protein;protein_id=TGE11593.1;start_range=.,1;transl_table=11 PYKI01000678.1 Genbank gene 263 619 . - . ID=gene-C9F07_05900;Name=C9F07_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05900 PYKI01000678.1 Protein Homology CDS 263 619 . - 0 ID=cds-TGE11594.1;Parent=gene-C9F07_05900;Dbxref=NCBI_GP:TGE11594.1;Name=TGE11594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=C9F07_05900;product=MmcQ/YjbR family DNA-binding protein;protein_id=TGE11594.1;transl_table=11 PYKI01000678.1 Genbank gene 622 1038 . - . ID=gene-C9F07_05905;Name=C9F07_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05905 PYKI01000678.1 Protein Homology CDS 622 1038 . - 0 ID=cds-TGE11595.1;Parent=gene-C9F07_05905;Dbxref=NCBI_GP:TGE11595.1;Name=TGE11595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458548.1;locus_tag=C9F07_05905;product=thiamine phosphate synthase;protein_id=TGE11595.1;transl_table=11 ##sequence-region PYKI01001044.1 1 3962 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001044.1 Genbank region 1 3962 . + . ID=PYKI01001044.1:1..3962;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001044.1 Genbank gene 1 1984 . + . ID=gene-C9F07_09625;Name=C9F07_09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09625;partial=true;start_range=.,1 PYKI01001044.1 Protein Homology CDS 1 1984 . + 1 ID=cds-TGD96677.1;Parent=gene-C9F07_09625;Dbxref=NCBI_GP:TGD96677.1;Name=TGD96677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455854.1;locus_tag=C9F07_09625;partial=true;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=TGD96677.1;start_range=.,1;transl_table=11 PYKI01001044.1 Genbank gene 2043 2252 . - . ID=gene-C9F07_09630;Name=C9F07_09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09630 PYKI01001044.1 Protein Homology CDS 2043 2252 . - 0 ID=cds-TGD96678.1;Parent=gene-C9F07_09630;Dbxref=NCBI_GP:TGD96678.1;Name=TGD96678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936587.1;locus_tag=C9F07_09630;product=hypothetical protein;protein_id=TGD96678.1;transl_table=11 PYKI01001044.1 Genbank gene 2466 2900 . + . ID=gene-C9F07_09635;Name=C9F07_09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09635 PYKI01001044.1 Protein Homology CDS 2466 2900 . + 0 ID=cds-TGD96679.1;Parent=gene-C9F07_09635;Dbxref=NCBI_GP:TGD96679.1;Name=TGD96679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455852.1;locus_tag=C9F07_09635;product=universal stress protein UspF;protein_id=TGD96679.1;transl_table=11 PYKI01001044.1 Genbank gene 2953 3291 . - . ID=gene-C9F07_09640;Name=C9F07_09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09640 PYKI01001044.1 Protein Homology CDS 2953 3291 . - 0 ID=cds-TGD96680.1;Parent=gene-C9F07_09640;Dbxref=NCBI_GP:TGD96680.1;Name=TGD96680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455851.1;locus_tag=C9F07_09640;product=QacE family quaternary ammonium compound efflux SMR transporter;protein_id=TGD96680.1;transl_table=11 PYKI01001044.1 Genbank gene 3284 3394 . - . ID=gene-C9F07_09645;Name=C9F07_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09645 PYKI01001044.1 Protein Homology CDS 3284 3394 . - 0 ID=cds-TGD96681.1;Parent=gene-C9F07_09645;Dbxref=NCBI_GP:TGD96681.1;Name=TGD96681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465579.1;locus_tag=C9F07_09645;product=multidrug transporter;protein_id=TGD96681.1;transl_table=11 PYKI01001044.1 Genbank gene 3566 3962 . - . ID=gene-C9F07_09650;Name=C9F07_09650;end_range=3962,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09650;partial=true PYKI01001044.1 Protein Homology CDS 3566 3962 . - 1 ID=cds-TGD96682.1;Parent=gene-C9F07_09650;Dbxref=NCBI_GP:TGD96682.1;Name=TGD96682.1;end_range=3962,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835222.1;locus_tag=C9F07_09650;partial=true;product=DUF4765 domain-containing protein;protein_id=TGD96682.1;transl_table=11 ##sequence-region PYKI01002309.1 1 1186 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002309.1 Genbank region 1 1186 . + . ID=PYKI01002309.1:1..1186;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002309.1 Genbank gene 1 254 . - . ID=gene-C9F07_22630;Name=C9F07_22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22630;partial=true;start_range=.,1 PYKI01002309.1 Protein Homology CDS 1 254 . - 0 ID=cds-TGD54256.1;Parent=gene-C9F07_22630;Dbxref=NCBI_GP:TGD54256.1;Name=TGD54256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455182.1;locus_tag=C9F07_22630;partial=true;product=LysR family transcriptional regulator;protein_id=TGD54256.1;start_range=.,1;transl_table=11 PYKI01002309.1 Genbank pseudogene 179 415 . - . ID=gene-C9F07_22635;Name=C9F07_22635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22635;pseudo=true PYKI01002309.1 Protein Homology CDS 179 415 . - 0 ID=cds-C9F07_22635;Parent=gene-C9F07_22635;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663639.1;locus_tag=C9F07_22635;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002309.1 Genbank gene 571 1186 . - . ID=gene-C9F07_22640;Name=C9F07_22640;end_range=1186,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22640;partial=true PYKI01002309.1 Protein Homology CDS 571 1186 . - 1 ID=cds-TGD54257.1;Parent=gene-C9F07_22640;Dbxref=NCBI_GP:TGD54257.1;Name=TGD54257.1;end_range=1186,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=C9F07_22640;partial=true;product=thiol:disulfide interchange protein DsbG;protein_id=TGD54257.1;transl_table=11 ##sequence-region PYKI01000512.1 1 1185 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000512.1 Genbank region 1 1185 . + . ID=PYKI01000512.1:1..1185;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000512.1 Genbank gene 48 443 . + . ID=gene-C9F07_04230;Name=C9F07_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04230 PYKI01000512.1 Protein Homology CDS 48 443 . + 0 ID=cds-TGE16760.1;Parent=gene-C9F07_04230;Dbxref=NCBI_GP:TGE16760.1;Name=TGE16760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455635.1;locus_tag=C9F07_04230;product=curli production assembly/transport protein CsgE;protein_id=TGE16760.1;transl_table=11 PYKI01000512.1 Genbank gene 470 886 . + . ID=gene-C9F07_04235;Name=C9F07_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04235 PYKI01000512.1 Protein Homology CDS 470 886 . + 0 ID=cds-TGE16761.1;Parent=gene-C9F07_04235;Dbxref=NCBI_GP:TGE16761.1;Name=TGE16761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455634.1;locus_tag=C9F07_04235;product=curli production assembly/transport protein CsgF;protein_id=TGE16761.1;transl_table=11 PYKI01000512.1 Genbank gene 913 1185 . + . ID=gene-C9F07_04240;Name=C9F07_04240;end_range=1185,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04240;partial=true PYKI01000512.1 Protein Homology CDS 913 1185 . + 0 ID=cds-TGE16762.1;Parent=gene-C9F07_04240;Dbxref=NCBI_GP:TGE16762.1;Name=TGE16762.1;Note=involved in the stability of the curlin proteins during assembly%3B involved in the secretion of the major curlin subunit CsgA across the outer membrane;end_range=1185,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455633.1;locus_tag=C9F07_04240;partial=true;product=curli production assembly/transport protein CsgG;protein_id=TGE16762.1;transl_table=11 ##sequence-region PYKI01003524.1 1 1184 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003524.1 Genbank region 1 1184 . + . ID=PYKI01003524.1:1..1184;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003524.1 Genbank gene 1 134 . + . ID=gene-C9F07_35555;Name=C9F07_35555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35555;partial=true;start_range=.,1 PYKI01003524.1 Protein Homology CDS 1 134 . + 2 ID=cds-TGD31518.1;Parent=gene-C9F07_35555;Dbxref=NCBI_GP:TGD31518.1;Name=TGD31518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=C9F07_35555;partial=true;product=DUF2633 domain-containing protein;protein_id=TGD31518.1;start_range=.,1;transl_table=11 PYKI01003524.1 Genbank pseudogene 213 544 . - . ID=gene-C9F07_35560;Name=C9F07_35560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35560;pseudo=true PYKI01003524.1 Protein Homology CDS 213 544 . - 0 ID=cds-C9F07_35560;Parent=gene-C9F07_35560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004590347.1;locus_tag=C9F07_35560;product=plasmid stabilization protein;pseudo=true;transl_table=11 PYKI01003524.1 Genbank gene 591 845 . + . ID=gene-C9F07_35565;Name=C9F07_35565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35565 PYKI01003524.1 Protein Homology CDS 591 845 . + 0 ID=cds-TGD31519.1;Parent=gene-C9F07_35565;Dbxref=NCBI_GP:TGD31519.1;Name=TGD31519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000144753.1;locus_tag=C9F07_35565;product=hypothetical protein;protein_id=TGD31519.1;transl_table=11 PYKI01003524.1 Genbank gene 830 1159 . + . ID=gene-C9F07_35570;Name=C9F07_35570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35570 PYKI01003524.1 Protein Homology CDS 830 1159 . + 0 ID=cds-TGD31520.1;Parent=gene-C9F07_35570;Dbxref=NCBI_GP:TGD31520.1;Name=TGD31520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=C9F07_35570;product=DUF1493 domain-containing protein;protein_id=TGD31520.1;transl_table=11 ##sequence-region PYKI01003484.1 1 1184 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003484.1 Genbank region 1 1184 . + . ID=PYKI01003484.1:1..1184;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003484.1 Genbank gene 1 365 . + . ID=gene-C9F07_35060;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=C9F07_35060;partial=true;start_range=.,1 PYKI01003484.1 Protein Homology CDS 1 365 . + 2 ID=cds-TGD32487.1;Parent=gene-C9F07_35060;Dbxref=NCBI_GP:TGD32487.1;Name=TGD32487.1;gbkey=CDS;gene=modA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=C9F07_35060;partial=true;product=molybdate ABC transporter substrate-binding protein;protein_id=TGD32487.1;start_range=.,1;transl_table=11 PYKI01003484.1 Genbank gene 365 1054 . + . ID=gene-C9F07_35065;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;gene_synonym=chlJ;locus_tag=C9F07_35065 PYKI01003484.1 Protein Homology CDS 365 1054 . + 0 ID=cds-TGD32488.1;Parent=gene-C9F07_35065;Dbxref=NCBI_GP:TGD32488.1;Name=TGD32488.1;Note=part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE;gbkey=CDS;gene=modB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455324.1;locus_tag=C9F07_35065;product=molybdate ABC transporter permease subunit;protein_id=TGD32488.1;transl_table=11 PYKI01003484.1 Genbank gene 1057 1184 . + . ID=gene-C9F07_35070;Name=modC;end_range=1184,.;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=C9F07_35070;partial=true PYKI01003484.1 Protein Homology CDS 1057 1184 . + 0 ID=cds-TGD32489.1;Parent=gene-C9F07_35070;Dbxref=NCBI_GP:TGD32489.1;Name=TGD32489.1;Note=Part of the ABC transporter complex modABC involved in molybdenum import;end_range=1184,.;gbkey=CDS;gene=modC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455325.1;locus_tag=C9F07_35070;partial=true;product=molybdenum ABC transporter ATP-binding protein;protein_id=TGD32489.1;transl_table=11 ##sequence-region PYKI01001948.1 1 1184 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001948.1 Genbank region 1 1184 . + . ID=PYKI01001948.1:1..1184;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001948.1 Genbank gene 1 321 . + . ID=gene-C9F07_18765;Name=C9F07_18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18765;partial=true;start_range=.,1 PYKI01001948.1 Protein Homology CDS 1 321 . + 0 ID=cds-TGD60564.1;Parent=gene-C9F07_18765;Dbxref=NCBI_GP:TGD60564.1;Name=TGD60564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=C9F07_18765;partial=true;product=hypothetical protein;protein_id=TGD60564.1;start_range=.,1;transl_table=11 PYKI01001948.1 Genbank gene 311 673 . + . ID=gene-C9F07_18770;Name=C9F07_18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18770 PYKI01001948.1 Protein Homology CDS 311 673 . + 0 ID=cds-TGD60565.1;Parent=gene-C9F07_18770;Dbxref=NCBI_GP:TGD60565.1;Name=TGD60565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=C9F07_18770;product=hypothetical protein;protein_id=TGD60565.1;transl_table=11 PYKI01001948.1 Genbank gene 670 1184 . + . ID=gene-C9F07_18775;Name=C9F07_18775;end_range=1184,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18775;partial=true PYKI01001948.1 Protein Homology CDS 670 1184 . + 0 ID=cds-TGD60566.1;Parent=gene-C9F07_18775;Dbxref=NCBI_GP:TGD60566.1;Name=TGD60566.1;end_range=1184,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=C9F07_18775;partial=true;product=hypothetical protein;protein_id=TGD60566.1;transl_table=11 ##sequence-region PYKI01002553.1 1 1184 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002553.1 Genbank region 1 1184 . + . ID=PYKI01002553.1:1..1184;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002553.1 Genbank gene 1 413 . + . ID=gene-C9F07_25340;Name=C9F07_25340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25340;partial=true;start_range=.,1 PYKI01002553.1 Protein Homology CDS 1 413 . + 2 ID=cds-TGD49898.1;Parent=gene-C9F07_25340;Dbxref=NCBI_GP:TGD49898.1;Name=TGD49898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456907.1;locus_tag=C9F07_25340;partial=true;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=TGD49898.1;start_range=.,1;transl_table=11 PYKI01002553.1 Genbank gene 403 1077 . + . ID=gene-C9F07_25345;Name=C9F07_25345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25345 PYKI01002553.1 Protein Homology CDS 403 1077 . + 0 ID=cds-TGD49899.1;Parent=gene-C9F07_25345;Dbxref=NCBI_GP:TGD49899.1;Name=TGD49899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=C9F07_25345;product=cell division protein DedD;protein_id=TGD49899.1;transl_table=11 ##sequence-region PYKI01001744.1 1 1183 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001744.1 Genbank region 1 1183 . + . ID=PYKI01001744.1:1..1183;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001744.1 Genbank gene 1 234 . - . ID=gene-C9F07_16690;Name=C9F07_16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16690;partial=true;start_range=.,1 PYKI01001744.1 Protein Homology CDS 1 234 . - 0 ID=cds-TGD68470.1;Parent=gene-C9F07_16690;Dbxref=NCBI_GP:TGD68470.1;Name=TGD68470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458162.1;locus_tag=C9F07_16690;partial=true;product=PTS fructose transporter subunit IIA;protein_id=TGD68470.1;start_range=.,1;transl_table=11 PYKI01001744.1 Genbank gene 208 447 . + . ID=gene-C9F07_16695;Name=C9F07_16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16695 PYKI01001744.1 Protein Homology CDS 208 447 . + 0 ID=cds-TGD68468.1;Parent=gene-C9F07_16695;Dbxref=NCBI_GP:TGD68468.1;Name=TGD68468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664733.1;locus_tag=C9F07_16695;product=hypothetical protein;protein_id=TGD68468.1;transl_table=11 PYKI01001744.1 Genbank gene 453 1183 . - . ID=gene-C9F07_16700;Name=dagR;end_range=1183,.;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=C9F07_16700;partial=true PYKI01001744.1 Protein Homology CDS 453 1183 . - 2 ID=cds-TGD68469.1;Parent=gene-C9F07_16700;Dbxref=NCBI_GP:TGD68469.1;Name=TGD68469.1;end_range=1183,.;gbkey=CDS;gene=dagR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=C9F07_16700;partial=true;product=transcriptional regulator DagR;protein_id=TGD68469.1;transl_table=11 ##sequence-region PYKI01002848.1 1 1182 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002848.1 Genbank region 1 1182 . + . ID=PYKI01002848.1:1..1182;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002848.1 Genbank gene 1 926 . + . ID=gene-C9F07_28470;Name=C9F07_28470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28470;partial=true;start_range=.,1 PYKI01002848.1 Protein Homology CDS 1 926 . + 2 ID=cds-TGD45544.1;Parent=gene-C9F07_28470;Dbxref=NCBI_GP:TGD45544.1;Name=TGD45544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457052.1;locus_tag=C9F07_28470;partial=true;product=outer membrane protein assembly factor BamB;protein_id=TGD45544.1;start_range=.,1;transl_table=11 PYKI01002848.1 Genbank gene 1043 1182 . + . ID=gene-C9F07_28475;Name=C9F07_28475;end_range=1182,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28475;partial=true PYKI01002848.1 Protein Homology CDS 1043 1182 . + 0 ID=cds-TGD45545.1;Parent=gene-C9F07_28475;Dbxref=NCBI_GP:TGD45545.1;Name=TGD45545.1;end_range=1182,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457051.1;locus_tag=C9F07_28475;partial=true;product=hypothetical protein;protein_id=TGD45545.1;transl_table=11 ##sequence-region PYKI01003149.1 1 1182 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003149.1 Genbank region 1 1182 . + . ID=PYKI01003149.1:1..1182;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003149.1 Genbank gene 1 860 . - . ID=gene-C9F07_31595;Name=C9F07_31595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31595;partial=true;start_range=.,1 PYKI01003149.1 Protein Homology CDS 1 860 . - 0 ID=cds-TGD38505.1;Parent=gene-C9F07_31595;Dbxref=NCBI_GP:TGD38505.1;Name=TGD38505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454933.1;locus_tag=C9F07_31595;partial=true;product=glutamate 5-kinase;protein_id=TGD38505.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001958.1 1 1181 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001958.1 Genbank region 1 1181 . + . ID=PYKI01001958.1:1..1181;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001958.1 Genbank gene 1 718 . + . ID=gene-C9F07_18910;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;gene_synonym=dniR,yafG;locus_tag=C9F07_18910;partial=true;start_range=.,1 PYKI01001958.1 Protein Homology CDS 1 718 . + 1 ID=cds-TGD60427.1;Parent=gene-C9F07_18910;Dbxref=NCBI_GP:TGD60427.1;Name=TGD60427.1;Note=catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and/or cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall;gbkey=CDS;gene=mltD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454863.1;locus_tag=C9F07_18910;partial=true;product=lytic transglycosylase;protein_id=TGD60427.1;start_range=.,1;transl_table=11 PYKI01001958.1 Genbank pseudogene 774 1181 . - . ID=gene-C9F07_18915;Name=C9F07_18915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18915;pseudo=true PYKI01001958.1 Protein Homology CDS 774 1181 . - 0 ID=cds-C9F07_18915;Parent=gene-C9F07_18915;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454862.1;locus_tag=C9F07_18915;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01003300.1 1 3952 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003300.1 Genbank region 1 3952 . + . ID=PYKI01003300.1:1..3952;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003300.1 Genbank gene 1 1521 . + . ID=gene-C9F07_33175;Name=C9F07_33175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33175;partial=true;start_range=.,1 PYKI01003300.1 Protein Homology CDS 1 1521 . + 0 ID=cds-TGD36051.1;Parent=gene-C9F07_33175;Dbxref=NCBI_GP:TGD36051.1;Name=TGD36051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=C9F07_33175;partial=true;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=TGD36051.1;start_range=.,1;transl_table=11 PYKI01003300.1 Genbank gene 1734 2099 . + . ID=gene-C9F07_33180;Name=C9F07_33180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33180 PYKI01003300.1 Protein Homology CDS 1734 2099 . + 0 ID=cds-TGD36052.1;Parent=gene-C9F07_33180;Dbxref=NCBI_GP:TGD36052.1;Name=TGD36052.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455060.1;locus_tag=C9F07_33180;product=transcriptional regulator;protein_id=TGD36052.1;transl_table=11 PYKI01003300.1 Genbank gene 2104 3390 . + . ID=gene-C9F07_33185;Name=C9F07_33185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33185 PYKI01003300.1 Protein Homology CDS 2104 3390 . + 0 ID=cds-TGD36053.1;Parent=gene-C9F07_33185;Dbxref=NCBI_GP:TGD36053.1;Name=TGD36053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455061.1;locus_tag=C9F07_33185;product=ammonium transporter;protein_id=TGD36053.1;transl_table=11 PYKI01003300.1 Genbank gene 3490 3952 . - . ID=gene-C9F07_33190;Name=C9F07_33190;end_range=3952,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33190;partial=true PYKI01003300.1 Protein Homology CDS 3490 3952 . - 1 ID=cds-TGD36054.1;Parent=gene-C9F07_33190;Dbxref=NCBI_GP:TGD36054.1;Name=TGD36054.1;end_range=3952,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=C9F07_33190;partial=true;product=acyl-CoA thioesterase II;protein_id=TGD36054.1;transl_table=11 ##sequence-region PYKI01000776.1 1 7846 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000776.1 Genbank region 1 7846 . + . ID=PYKI01000776.1:1..7846;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000776.1 Genbank gene 1 1145 . - . ID=gene-C9F07_06920;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=C9F07_06920;partial=true;start_range=.,1 PYKI01000776.1 Protein Homology CDS 1 1145 . - 0 ID=cds-TGE09180.1;Parent=gene-C9F07_06920;Dbxref=NCBI_GP:TGE09180.1;Name=TGE09180.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456114.1;locus_tag=C9F07_06920;partial=true;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=TGE09180.1;start_range=.,1;transl_table=11 PYKI01000776.1 Genbank gene 1130 1498 . - . ID=gene-C9F07_06925;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=C9F07_06925 PYKI01000776.1 Protein Homology CDS 1130 1498 . - 0 ID=cds-TGE09181.1;Parent=gene-C9F07_06925;Dbxref=NCBI_GP:TGE09181.1;Name=TGE09181.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=C9F07_06925;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=TGE09181.1;transl_table=11 PYKI01000776.1 Genbank gene 1556 2572 . - . ID=gene-C9F07_06930;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=C9F07_06930 PYKI01000776.1 Protein Homology CDS 1556 2572 . - 0 ID=cds-TGE09182.1;Parent=gene-C9F07_06930;Dbxref=NCBI_GP:TGE09182.1;Name=TGE09182.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=C9F07_06930;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=TGE09182.1;transl_table=11 PYKI01000776.1 Genbank gene 2538 3212 . - . ID=gene-C9F07_06935;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=C9F07_06935 PYKI01000776.1 Protein Homology CDS 2538 3212 . - 0 ID=cds-TGE09183.1;Parent=gene-C9F07_06935;Dbxref=NCBI_GP:TGE09183.1;Name=TGE09183.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=C9F07_06935;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=TGE09183.1;transl_table=11 PYKI01000776.1 Genbank gene 3209 3757 . - . ID=gene-C9F07_06940;Name=C9F07_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06940 PYKI01000776.1 Protein Homology CDS 3209 3757 . - 0 ID=cds-TGE09191.1;Parent=gene-C9F07_06940;Dbxref=NCBI_GP:TGE09191.1;Name=TGE09191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=C9F07_06940;product=cytoplasmic protein;protein_id=TGE09191.1;transl_table=11 PYKI01000776.1 Genbank gene 3775 4524 . - . ID=gene-C9F07_06945;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=C9F07_06945 PYKI01000776.1 Protein Homology CDS 3775 4524 . - 0 ID=cds-TGE09184.1;Parent=gene-C9F07_06945;Dbxref=NCBI_GP:TGE09184.1;Name=TGE09184.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456119.1;locus_tag=C9F07_06945;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=TGE09184.1;transl_table=11 PYKI01000776.1 Genbank gene 4521 4769 . - . ID=gene-C9F07_06950;Name=C9F07_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06950 PYKI01000776.1 Protein Homology CDS 4521 4769 . - 0 ID=cds-TGE09192.1;Parent=gene-C9F07_06950;Dbxref=NCBI_GP:TGE09192.1;Name=TGE09192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456120.1;locus_tag=C9F07_06950;product=EscI/YscI/HrpB family type III secretion system inner rod protein;protein_id=TGE09192.1;transl_table=11 PYKI01000776.1 Genbank gene 4781 5071 . - . ID=gene-C9F07_06955;Name=C9F07_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06955 PYKI01000776.1 Protein Homology CDS 4781 5071 . - 0 ID=cds-TGE09185.1;Parent=gene-C9F07_06955;Dbxref=NCBI_GP:TGE09185.1;Name=TGE09185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=C9F07_06955;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=TGE09185.1;transl_table=11 PYKI01000776.1 Genbank gene 5049 5264 . - . ID=gene-C9F07_06960;Name=C9F07_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06960 PYKI01000776.1 Protein Homology CDS 5049 5264 . - 0 ID=cds-TGE09186.1;Parent=gene-C9F07_06960;Dbxref=NCBI_GP:TGE09186.1;Name=TGE09186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456122.1;locus_tag=C9F07_06960;product=EscF/YscF/HrpA family type III secretion system needle major subunit;protein_id=TGE09186.1;transl_table=11 PYKI01000776.1 Genbank gene 5358 6047 . - . ID=gene-C9F07_06965;Name=C9F07_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06965 PYKI01000776.1 Protein Homology CDS 5358 6047 . - 0 ID=cds-TGE09187.1;Parent=gene-C9F07_06965;Dbxref=NCBI_GP:TGE09187.1;Name=TGE09187.1;Note=with SseF is involved in the aggregation of the host endosomes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=C9F07_06965;product=pathogenicity island 2 effector protein SseG;protein_id=TGE09187.1;transl_table=11 PYKI01000776.1 Genbank gene 6044 6826 . - . ID=gene-C9F07_06970;Name=C9F07_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06970 PYKI01000776.1 Protein Homology CDS 6044 6826 . - 0 ID=cds-TGE09188.1;Parent=gene-C9F07_06970;Dbxref=NCBI_GP:TGE09188.1;Name=TGE09188.1;Note=with SseG is involved in the aggregation of the host endosomes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=C9F07_06970;product=pathogenicity island 2 effector protein SseF;protein_id=TGE09188.1;transl_table=11 PYKI01000776.1 Genbank gene 6842 7276 . - . ID=gene-C9F07_06975;Name=C9F07_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06975 PYKI01000776.1 Protein Homology CDS 6842 7276 . - 0 ID=cds-TGE09189.1;Parent=gene-C9F07_06975;Dbxref=NCBI_GP:TGE09189.1;Name=TGE09189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=C9F07_06975;product=CesD/SycD/LcrH family type III secretion system chaperone;protein_id=TGE09189.1;transl_table=11 PYKI01000776.1 Genbank gene 7328 7744 . - . ID=gene-C9F07_06980;Name=C9F07_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06980 PYKI01000776.1 Protein Homology CDS 7328 7744 . - 0 ID=cds-TGE09190.1;Parent=gene-C9F07_06980;Dbxref=NCBI_GP:TGE09190.1;Name=TGE09190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=C9F07_06980;product=pathogenicity island 2 effector protein SseE;protein_id=TGE09190.1;transl_table=11 PYKI01000776.1 Genbank gene 7747 7846 . - . ID=gene-C9F07_06985;Name=C9F07_06985;end_range=7846,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06985;partial=true PYKI01000776.1 Protein Homology CDS 7747 7846 . - 1 ID=cds-TGE09193.1;Parent=gene-C9F07_06985;Dbxref=NCBI_GP:TGE09193.1;Name=TGE09193.1;Note=may be involved in the translocation of effector proteins into the host cell;end_range=7846,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456127.1;locus_tag=C9F07_06985;partial=true;product=pathogenicity island 2 effector protein SseD;protein_id=TGE09193.1;transl_table=11 ##sequence-region PYKI01002093.1 1 1178 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002093.1 Genbank region 1 1178 . + . ID=PYKI01002093.1:1..1178;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002093.1 Genbank gene 1 900 . + . ID=gene-C9F07_20305;Name=C9F07_20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20305;partial=true;start_range=.,1 PYKI01002093.1 Protein Homology CDS 1 900 . + 0 ID=cds-TGD58808.1;Parent=gene-C9F07_20305;Dbxref=NCBI_GP:TGD58808.1;Name=TGD58808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=C9F07_20305;partial=true;product=GTPase HflX;protein_id=TGD58808.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002023.1 1 1177 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002023.1 Genbank region 1 1177 . + . ID=PYKI01002023.1:1..1177;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002023.1 Genbank gene 1 176 . - . ID=gene-C9F07_19520;Name=C9F07_19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19520;partial=true;start_range=.,1 PYKI01002023.1 Protein Homology CDS 1 176 . - 0 ID=cds-TGD60059.1;Parent=gene-C9F07_19520;Dbxref=NCBI_GP:TGD60059.1;Name=TGD60059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418143.2;locus_tag=C9F07_19520;partial=true;product=YceK/YidQ family lipoprotein;protein_id=TGD60059.1;start_range=.,1;transl_table=11 PYKI01002023.1 Genbank gene 486 899 . + . ID=gene-C9F07_19525;Name=C9F07_19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19525 PYKI01002023.1 Protein Homology CDS 486 899 . + 0 ID=cds-TGD60060.1;Parent=gene-C9F07_19525;Dbxref=NCBI_GP:TGD60060.1;Name=TGD60060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=C9F07_19525;product=heat shock protein IbpA;protein_id=TGD60060.1;transl_table=11 PYKI01002023.1 Genbank gene 1009 1177 . + . ID=gene-C9F07_19530;Name=C9F07_19530;end_range=1177,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19530;partial=true PYKI01002023.1 Protein Homology CDS 1009 1177 . + 0 ID=cds-TGD60061.1;Parent=gene-C9F07_19530;Dbxref=NCBI_GP:TGD60061.1;Name=TGD60061.1;Note=16 kDa heat shock protein B%3B associates with aggregated proteins%2C together with ibpA%2C to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress%3B ATP-independent;end_range=1177,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458131.1;locus_tag=C9F07_19530;partial=true;product=heat-shock protein;protein_id=TGD60061.1;transl_table=11 ##sequence-region PYKI01002524.1 1 1177 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002524.1 Genbank region 1 1177 . + . ID=PYKI01002524.1:1..1177;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002524.1 Genbank pseudogene 239 1177 . - . ID=gene-C9F07_25050;Name=C9F07_25050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25050;pseudo=true PYKI01002524.1 Protein Homology CDS 239 1177 . - 0 ID=cds-C9F07_25050;Parent=gene-C9F07_25050;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457633.1;locus_tag=C9F07_25050;product=glycerate 2-kinase;pseudo=true;transl_table=11 ##sequence-region PYKI01002391.1 1 1176 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002391.1 Genbank region 1 1176 . + . ID=PYKI01002391.1:1..1176;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002391.1 Genbank gene 1 174 . + . ID=gene-C9F07_23535;Name=C9F07_23535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23535;partial=true;start_range=.,1 PYKI01002391.1 Protein Homology CDS 1 174 . + 0 ID=cds-TGD52152.1;Parent=gene-C9F07_23535;Dbxref=NCBI_GP:TGD52152.1;Name=TGD52152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455575.1;locus_tag=C9F07_23535;partial=true;product=hypothetical protein;protein_id=TGD52152.1;start_range=.,1;transl_table=11 PYKI01002391.1 Genbank gene 269 727 . + . ID=gene-C9F07_23540;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=C9F07_23540 PYKI01002391.1 Protein Homology CDS 269 727 . + 0 ID=cds-TGD52153.1;Parent=gene-C9F07_23540;Dbxref=NCBI_GP:TGD52153.1;Name=TGD52153.1;gbkey=CDS;gene=mgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455574.1;locus_tag=C9F07_23540;product=methylglyoxal synthase;protein_id=TGD52153.1;transl_table=11 PYKI01002391.1 Genbank gene 763 1176 . - . ID=gene-C9F07_23545;Name=C9F07_23545;end_range=1176,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23545;partial=true PYKI01002391.1 Protein Homology CDS 763 1176 . - 0 ID=cds-TGD52154.1;Parent=gene-C9F07_23545;Dbxref=NCBI_GP:TGD52154.1;Name=TGD52154.1;end_range=1176,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=C9F07_23545;partial=true;product=DNA helicase IV;protein_id=TGD52154.1;transl_table=11 ##sequence-region PYKI01000308.1 1 1176 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000308.1 Genbank region 1 1176 . + . ID=PYKI01000308.1:1..1176;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000308.1 Genbank gene 1 763 . + . ID=gene-C9F07_02090;Name=C9F07_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02090;partial=true;start_range=.,1 PYKI01000308.1 Protein Homology CDS 1 763 . + 1 ID=cds-TGE27779.1;Parent=gene-C9F07_02090;Dbxref=NCBI_GP:TGE27779.1;Name=TGE27779.1;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457592.1;locus_tag=C9F07_02090;partial=true;product=bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase;protein_id=TGE27779.1;start_range=.,1;transl_table=11 PYKI01000308.1 Genbank gene 811 1176 . + . ID=gene-C9F07_02095;Name=C9F07_02095;end_range=1176,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02095;partial=true PYKI01000308.1 Protein Homology CDS 811 1176 . + 0 ID=cds-TGE27780.1;Parent=gene-C9F07_02095;Dbxref=NCBI_GP:TGE27780.1;Name=TGE27780.1;end_range=1176,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457591.1;locus_tag=C9F07_02095;partial=true;product=hypothetical protein;protein_id=TGE27780.1;transl_table=11 ##sequence-region PYKI01001112.1 1 1176 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001112.1 Genbank region 1 1176 . + . ID=PYKI01001112.1:1..1176;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001112.1 Genbank gene 1 504 . + . ID=gene-C9F07_10365;Name=C9F07_10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10365;partial=true;start_range=.,1 PYKI01001112.1 Protein Homology CDS 1 504 . + 0 ID=cds-TGD95019.1;Parent=gene-C9F07_10365;Dbxref=NCBI_GP:TGD95019.1;Name=TGD95019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462104.1;locus_tag=C9F07_10365;partial=true;product=4%2C5-DOPA dioxygenase extradiol;protein_id=TGD95019.1;start_range=.,1;transl_table=11 PYKI01001112.1 Genbank pseudogene 566 1176 . - . ID=gene-C9F07_10370;Name=C9F07_10370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10370;pseudo=true PYKI01001112.1 Protein Homology CDS 566 1176 . - 2 ID=cds-C9F07_10370;Parent=gene-C9F07_10370;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457580.1;locus_tag=C9F07_10370;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001859.1 1 1175 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001859.1 Genbank region 1 1175 . + . ID=PYKI01001859.1:1..1175;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001859.1 Genbank gene 193 747 . + . ID=gene-C9F07_17875;Name=C9F07_17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17875 PYKI01001859.1 Protein Homology CDS 193 747 . + 0 ID=cds-TGD63143.1;Parent=gene-C9F07_17875;Dbxref=NCBI_GP:TGD63143.1;Name=TGD63143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458500.1;locus_tag=C9F07_17875;product=gamma carbonic anhydrase family protein;protein_id=TGD63143.1;transl_table=11 PYKI01001859.1 Genbank gene 723 980 . - . ID=gene-C9F07_17880;Name=C9F07_17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17880 PYKI01001859.1 Protein Homology CDS 723 980 . - 0 ID=cds-TGD63144.1;Parent=gene-C9F07_17880;Dbxref=NCBI_GP:TGD63144.1;Name=TGD63144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=C9F07_17880;product=DUF1488 domain-containing protein;protein_id=TGD63144.1;transl_table=11 PYKI01001859.1 Genbank gene 977 1175 . - . ID=gene-C9F07_17885;Name=C9F07_17885;end_range=1175,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17885;partial=true PYKI01001859.1 Protein Homology CDS 977 1175 . - 1 ID=cds-TGD63145.1;Parent=gene-C9F07_17885;Dbxref=NCBI_GP:TGD63145.1;Name=TGD63145.1;end_range=1175,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458498.1;locus_tag=C9F07_17885;partial=true;product=shikimate dehydrogenase;protein_id=TGD63145.1;transl_table=11 ##sequence-region PYKI01001198.1 1 1175 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001198.1 Genbank region 1 1175 . + . ID=PYKI01001198.1:1..1175;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001198.1 Genbank gene 1 695 . + . ID=gene-C9F07_11215;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=C9F07_11215;partial=true;start_range=.,1 PYKI01001198.1 Protein Homology CDS 1 695 . + 2 ID=cds-TGD91750.1;Parent=gene-C9F07_11215;Dbxref=NCBI_GP:TGD91750.1;Name=TGD91750.1;gbkey=CDS;gene=cobD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=C9F07_11215;partial=true;product=cobalamin biosynthesis protein CobD;protein_id=TGD91750.1;start_range=.,1;transl_table=11 PYKI01001198.1 Genbank gene 706 1175 . + . ID=gene-C9F07_11220;Name=cbiC;end_range=1175,.;gbkey=Gene;gene=cbiC;gene_biotype=protein_coding;locus_tag=C9F07_11220;partial=true PYKI01001198.1 Protein Homology CDS 706 1175 . + 0 ID=cds-TGD91751.1;Parent=gene-C9F07_11220;Dbxref=NCBI_GP:TGD91751.1;Name=TGD91751.1;Note=catalyzes the interconversion of cobalt-precorrin-8X and cobyrinic acid in the anaerobic biosynthesis of cobalamin;end_range=1175,.;gbkey=CDS;gene=cbiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=C9F07_11220;partial=true;product=precorrin-8X methylmutase;protein_id=TGD91751.1;transl_table=11 ##sequence-region PYKI01003012.1 1 1175 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003012.1 Genbank region 1 1175 . + . ID=PYKI01003012.1:1..1175;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003012.1 Genbank gene 1 676 . + . ID=gene-C9F07_30195;Name=C9F07_30195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30195;partial=true;start_range=.,1 PYKI01003012.1 Protein Homology CDS 1 676 . + 1 ID=cds-TGD41184.1;Parent=gene-C9F07_30195;Dbxref=NCBI_GP:TGD41184.1;Name=TGD41184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=C9F07_30195;partial=true;product=DUF1338 domain-containing protein;protein_id=TGD41184.1;start_range=.,1;transl_table=11 PYKI01003012.1 Genbank gene 725 1175 . + . ID=gene-C9F07_30200;Name=C9F07_30200;end_range=1175,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30200;partial=true PYKI01003012.1 Protein Homology CDS 725 1175 . + 0 ID=cds-TGD41185.1;Parent=gene-C9F07_30200;Dbxref=NCBI_GP:TGD41185.1;Name=TGD41185.1;end_range=1175,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455874.1;locus_tag=C9F07_30200;partial=true;product=carboxylesterase;protein_id=TGD41185.1;transl_table=11 ##sequence-region PYKI01003277.1 1 1175 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003277.1 Genbank region 1 1175 . + . ID=PYKI01003277.1:1..1175;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003277.1 Genbank pseudogene 81 416 . + . ID=gene-C9F07_32965;Name=alr;gbkey=Gene;gene=alr;gene_biotype=pseudogene;locus_tag=C9F07_32965;pseudo=true PYKI01003277.1 Protein Homology CDS 81 416 . + 0 ID=cds-C9F07_32965;Parent=gene-C9F07_32965;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=alr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458545.1;locus_tag=C9F07_32965;product=alanine racemase;pseudo=true;transl_table=11 PYKI01003277.1 Genbank gene 602 1175 . + . ID=gene-C9F07_32970;Name=C9F07_32970;end_range=1175,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32970;partial=true PYKI01003277.1 Protein Homology CDS 602 1175 . + 0 ID=cds-TGD36164.1;Parent=gene-C9F07_32970;Dbxref=NCBI_GP:TGD36164.1;Name=TGD36164.1;end_range=1175,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458546.1;locus_tag=C9F07_32970;partial=true;product=aromatic amino acid transaminase;protein_id=TGD36164.1;transl_table=11 ##sequence-region PYKI01001408.1 1 3944 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001408.1 Genbank region 1 3944 . + . ID=PYKI01001408.1:1..3944;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001408.1 Genbank gene 1 367 . - . ID=gene-C9F07_13320;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=C9F07_13320;partial=true;start_range=.,1 PYKI01001408.1 Protein Homology CDS 1 367 . - 0 ID=cds-TGD83905.1;Parent=gene-C9F07_13320;Dbxref=NCBI_GP:TGD83905.1;Name=TGD83905.1;Note=Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458358.1;locus_tag=C9F07_13320;partial=true;product=high-affinity branched-chain amino acid ABC transporter permease LivM;protein_id=TGD83905.1;start_range=.,1;transl_table=11 PYKI01001408.1 Genbank gene 364 1290 . - . ID=gene-C9F07_13325;Name=C9F07_13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13325 PYKI01001408.1 Protein Homology CDS 364 1290 . - 0 ID=cds-TGD83906.1;Parent=gene-C9F07_13325;Dbxref=NCBI_GP:TGD83906.1;Name=TGD83906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=C9F07_13325;product=branched-chain amino acid ABC transporter permease;protein_id=TGD83906.1;transl_table=11 PYKI01001408.1 Genbank gene 1350 2459 . - . ID=gene-C9F07_13330;Name=livk;gbkey=Gene;gene=livk;gene_biotype=protein_coding;locus_tag=C9F07_13330 PYKI01001408.1 Protein Homology CDS 1350 2459 . - 0 ID=cds-TGD83907.1;Parent=gene-C9F07_13330;Dbxref=NCBI_GP:TGD83907.1;Name=TGD83907.1;gbkey=CDS;gene=livk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458356.1;locus_tag=C9F07_13330;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=TGD83907.1;transl_table=11 PYKI01001408.1 Genbank gene 2881 3264 . + . ID=gene-C9F07_13335;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=C9F07_13335 PYKI01001408.1 Protein Homology CDS 2881 3264 . + 0 ID=cds-TGD83908.1;Parent=gene-C9F07_13335;Dbxref=NCBI_GP:TGD83908.1;Name=TGD83908.1;gbkey=CDS;gene=panM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458355.1;locus_tag=C9F07_13335;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=TGD83908.1;transl_table=11 PYKI01001408.1 Genbank gene 3242 3376 . + . ID=gene-C9F07_13340;Name=C9F07_13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13340 PYKI01001408.1 Protein Homology CDS 3242 3376 . + 0 ID=cds-TGD83909.1;Parent=gene-C9F07_13340;Dbxref=NCBI_GP:TGD83909.1;Name=TGD83909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=C9F07_13340;product=hypothetical protein;protein_id=TGD83909.1;transl_table=11 PYKI01001408.1 Genbank gene 3460 3944 . - . ID=gene-C9F07_13345;Name=C9F07_13345;end_range=3944,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13345;partial=true PYKI01001408.1 Protein Homology CDS 3460 3944 . - 2 ID=cds-TGD83910.1;Parent=gene-C9F07_13345;Dbxref=NCBI_GP:TGD83910.1;Name=TGD83910.1;Note=with LivFGHM is involved in the high affinity leucine transport;end_range=3944,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462468.1;locus_tag=C9F07_13345;partial=true;product=leucine ABC transporter subunit substrate-binding protein LivK;protein_id=TGD83910.1;transl_table=11 ##sequence-region PYKI01001802.1 1 1173 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001802.1 Genbank region 1 1173 . + . ID=PYKI01001802.1:1..1173;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001802.1 Genbank gene 1 539 . - . ID=gene-C9F07_17360;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=C9F07_17360;partial=true;start_range=.,1 PYKI01001802.1 Protein Homology CDS 1 539 . - 0 ID=cds-TGD65905.1;Parent=gene-C9F07_17360;Dbxref=NCBI_GP:TGD65905.1;Name=TGD65905.1;gbkey=CDS;gene=miaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=C9F07_17360;partial=true;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=TGD65905.1;start_range=.,1;transl_table=11 PYKI01001802.1 Genbank gene 532 1173 . - . ID=gene-C9F07_17365;Name=C9F07_17365;end_range=1173,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17365;partial=true PYKI01001802.1 Protein Homology CDS 532 1173 . - 0 ID=cds-TGD65904.1;Parent=gene-C9F07_17365;Dbxref=NCBI_GP:TGD65904.1;Name=TGD65904.1;end_range=1173,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458795.1;locus_tag=C9F07_17365;partial=true;product=DNA mismatch repair protein MutL;protein_id=TGD65904.1;transl_table=11 ##sequence-region PYKI01000654.1 1 1172 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000654.1 Genbank region 1 1172 . + . ID=PYKI01000654.1:1..1172;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000654.1 Genbank pseudogene 60 176 . - . ID=gene-C9F07_05680;Name=C9F07_05680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05680;pseudo=true PYKI01000654.1 Protein Homology CDS 60 176 . - 0 ID=cds-C9F07_05680;Parent=gene-C9F07_05680;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458725.1;locus_tag=C9F07_05680;product=integrase;pseudo=true;transl_table=11 PYKI01000654.1 Genbank gene 180 812 . - . ID=gene-C9F07_05685;Name=C9F07_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05685 PYKI01000654.1 Protein Homology CDS 180 812 . - 0 ID=cds-TGE12243.1;Parent=gene-C9F07_05685;Dbxref=NCBI_GP:TGE12243.1;Name=TGE12243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458724.1;locus_tag=C9F07_05685;product=phage repressor protein;protein_id=TGE12243.1;transl_table=11 PYKI01000654.1 Genbank gene 932 1114 . + . ID=gene-C9F07_05690;Name=C9F07_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05690 PYKI01000654.1 Protein Homology CDS 932 1114 . + 0 ID=cds-TGE12244.1;Parent=gene-C9F07_05690;Dbxref=NCBI_GP:TGE12244.1;Name=TGE12244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458723.1;locus_tag=C9F07_05690;product=Rha family transcriptional regulator;protein_id=TGE12244.1;transl_table=11 ##sequence-region PYKI01001235.1 1 1172 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001235.1 Genbank region 1 1172 . + . ID=PYKI01001235.1:1..1172;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001235.1 Genbank gene 7 1172 . - . ID=gene-C9F07_11535;Name=C9F07_11535;end_range=1172,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11535;partial=true PYKI01001235.1 Protein Homology CDS 7 1172 . - 2 ID=cds-TGD90978.1;Parent=gene-C9F07_11535;Dbxref=NCBI_GP:TGD90978.1;Name=TGD90978.1;end_range=1172,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=C9F07_11535;partial=true;product=NADP-dependent succinate-semialdehyde dehydrogenase I;protein_id=TGD90978.1;transl_table=11 ##sequence-region PYKI01002312.1 1 1172 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002312.1 Genbank region 1 1172 . + . ID=PYKI01002312.1:1..1172;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002312.1 Genbank gene 1 695 . - . ID=gene-C9F07_22660;Name=C9F07_22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22660;partial=true;start_range=.,1 PYKI01002312.1 Protein Homology CDS 1 695 . - 0 ID=cds-TGD54249.1;Parent=gene-C9F07_22660;Dbxref=NCBI_GP:TGD54249.1;Name=TGD54249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=C9F07_22660;partial=true;product=hydrophobe/amphiphile efflux-1 family RND transporter;protein_id=TGD54249.1;start_range=.,1;transl_table=11 PYKI01002312.1 Genbank gene 707 1172 . - . ID=gene-C9F07_22665;Name=C9F07_22665;end_range=1172,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22665;partial=true PYKI01002312.1 Protein Homology CDS 707 1172 . - 1 ID=cds-TGD54250.1;Parent=gene-C9F07_22665;Dbxref=NCBI_GP:TGD54250.1;Name=TGD54250.1;end_range=1172,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=C9F07_22665;partial=true;product=efflux RND transporter periplasmic adaptor subunit;protein_id=TGD54250.1;transl_table=11 ##sequence-region PYKI01002294.1 1 1172 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002294.1 Genbank region 1 1172 . + . ID=PYKI01002294.1:1..1172;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002294.1 Genbank gene 1 1092 . - . ID=gene-C9F07_22520;Name=C9F07_22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22520;partial=true;start_range=.,1 PYKI01002294.1 Protein Homology CDS 1 1092 . - 0 ID=cds-TGD54664.1;Parent=gene-C9F07_22520;Dbxref=NCBI_GP:TGD54664.1;Name=TGD54664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574926.1;locus_tag=C9F07_22520;partial=true;product=lysophospholipid transporter LplT;protein_id=TGD54664.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001347.1 1 1171 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001347.1 Genbank region 1 1171 . + . ID=PYKI01001347.1:1..1171;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001347.1 Genbank gene 1 800 . + . ID=gene-C9F07_12630;Name=C9F07_12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12630;partial=true;start_range=.,1 PYKI01001347.1 Protein Homology CDS 1 800 . + 2 ID=cds-TGD85264.1;Parent=gene-C9F07_12630;Dbxref=NCBI_GP:TGD85264.1;Name=TGD85264.1;Note=serine sensor receptor;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456485.1;locus_tag=C9F07_12630;partial=true;product=methyl-accepting chemotaxis protein II;protein_id=TGD85264.1;start_range=.,1;transl_table=11 PYKI01001347.1 Genbank gene 954 1171 . + . ID=gene-C9F07_12635;Name=C9F07_12635;end_range=1171,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12635;partial=true PYKI01001347.1 Protein Homology CDS 954 1171 . + 0 ID=cds-TGD85265.1;Parent=gene-C9F07_12635;Dbxref=NCBI_GP:TGD85265.1;Name=TGD85265.1;Note=methylates the MCP;end_range=1171,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456484.1;locus_tag=C9F07_12635;partial=true;product=chemotaxis protein-glutamate O-methyltransferase;protein_id=TGD85265.1;transl_table=11 ##sequence-region PYKI01003052.1 1 1169 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003052.1 Genbank region 1 1169 . + . ID=PYKI01003052.1:1..1169;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003052.1 Genbank gene 1 1169 . + . ID=gene-C9F07_30620;Name=C9F07_30620;end_range=1169,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30620;partial=true;start_range=.,1 PYKI01003052.1 Protein Homology CDS 1 1169 . + 1 ID=cds-TGD40992.1;Parent=gene-C9F07_30620;Dbxref=NCBI_GP:TGD40992.1;Name=TGD40992.1;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;end_range=1169,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457793.3;locus_tag=C9F07_30620;partial=true;product=ATP-dependent DNA helicase RecQ;protein_id=TGD40992.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001776.1 1 1168 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001776.1 Genbank region 1 1168 . + . ID=PYKI01001776.1:1..1168;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001776.1 Genbank gene 1 723 . - . ID=gene-C9F07_17055;Name=C9F07_17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17055;partial=true;start_range=.,1 PYKI01001776.1 Protein Homology CDS 1 723 . - 0 ID=cds-TGD66959.1;Parent=gene-C9F07_17055;Dbxref=NCBI_GP:TGD66959.1;Name=TGD66959.1;Note=reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=C9F07_17055;partial=true;product=carbamate kinase;protein_id=TGD66959.1;start_range=.,1;transl_table=11 PYKI01001776.1 Genbank gene 734 1168 . - . ID=gene-C9F07_17060;Name=C9F07_17060;end_range=1168,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17060;partial=true PYKI01001776.1 Protein Homology CDS 734 1168 . - 0 ID=cds-TGD66958.1;Parent=gene-C9F07_17060;Dbxref=NCBI_GP:TGD66958.1;Name=TGD66958.1;Note=catalyzes the degradation of arginine to citruline and ammonia;end_range=1168,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458884.1;locus_tag=C9F07_17060;partial=true;product=arginine deiminase;protein_id=TGD66958.1;transl_table=11 ##sequence-region PYKI01002322.1 1 1168 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002322.1 Genbank region 1 1168 . + . ID=PYKI01002322.1:1..1168;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002322.1 Genbank gene 110 1168 . + . ID=gene-C9F07_22775;Name=C9F07_22775;end_range=1168,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22775;partial=true PYKI01002322.1 Protein Homology CDS 110 1168 . + 0 ID=cds-TGD53981.1;Parent=gene-C9F07_22775;Dbxref=NCBI_GP:TGD53981.1;Name=TGD53981.1;Note=unwinds double stranded DNA;end_range=1168,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458544.1;locus_tag=C9F07_22775;partial=true;product=replicative DNA helicase;protein_id=TGD53981.1;transl_table=11 ##sequence-region PYKI01003507.1 1 3939 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003507.1 Genbank region 1 3939 . + . ID=PYKI01003507.1:1..3939;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003507.1 Genbank gene 221 280 . - . ID=gene-C9F07_35340;Name=C9F07_35340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35340 PYKI01003507.1 Protein Homology CDS 221 280 . - 0 ID=cds-TGD31889.1;Parent=gene-C9F07_35340;Dbxref=NCBI_GP:TGD31889.1;Name=TGD31889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=C9F07_35340;product=hypothetical protein;protein_id=TGD31889.1;transl_table=11 PYKI01003507.1 Genbank gene 693 1049 . + . ID=gene-C9F07_35345;Name=C9F07_35345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35345 PYKI01003507.1 Protein Homology CDS 693 1049 . + 0 ID=cds-TGD31886.1;Parent=gene-C9F07_35345;Dbxref=NCBI_GP:TGD31886.1;Name=TGD31886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457016.1;locus_tag=C9F07_35345;product=ArsC family reductase;protein_id=TGD31886.1;transl_table=11 PYKI01003507.1 Genbank gene 1053 2180 . + . ID=gene-C9F07_35350;Name=C9F07_35350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35350 PYKI01003507.1 Protein Homology CDS 1053 2180 . + 0 ID=cds-TGD31887.1;Parent=gene-C9F07_35350;Dbxref=NCBI_GP:TGD31887.1;Name=TGD31887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=C9F07_35350;product=succinyl-diaminopimelate desuccinylase;protein_id=TGD31887.1;transl_table=11 PYKI01003507.1 Genbank gene 2208 2408 . + . ID=gene-C9F07_35355;Name=C9F07_35355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35355 PYKI01003507.1 Protein Homology CDS 2208 2408 . + 0 ID=cds-TGD31888.1;Parent=gene-C9F07_35355;Dbxref=NCBI_GP:TGD31888.1;Name=TGD31888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457018.1;locus_tag=C9F07_35355;product=hypothetical protein;protein_id=TGD31888.1;transl_table=11 PYKI01003507.1 Genbank gene 2435 3939 . - . ID=gene-C9F07_35360;Name=tmcA;end_range=3939,.;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=C9F07_35360;partial=true PYKI01003507.1 Protein Homology CDS 2435 3939 . - 2 ID=cds-TGD31890.1;Parent=gene-C9F07_35360;Dbxref=NCBI_GP:TGD31890.1;Name=TGD31890.1;end_range=3939,.;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=C9F07_35360;partial=true;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=TGD31890.1;transl_table=11 ##sequence-region PYKI01002291.1 1 1168 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002291.1 Genbank region 1 1168 . + . ID=PYKI01002291.1:1..1168;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002291.1 Genbank gene 88 1168 . - . ID=gene-C9F07_22490;Name=C9F07_22490;end_range=1168,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22490;partial=true PYKI01002291.1 Protein Homology CDS 88 1168 . - 1 ID=cds-TGD54672.1;Parent=gene-C9F07_22490;Dbxref=NCBI_GP:TGD54672.1;Name=TGD54672.1;end_range=1168,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454764.1;locus_tag=C9F07_22490;partial=true;product=aromatic amino acid transporter AroP;protein_id=TGD54672.1;transl_table=11 ##sequence-region PYKI01001755.1 1 1168 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001755.1 Genbank region 1 1168 . + . ID=PYKI01001755.1:1..1168;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001755.1 Genbank gene 1 599 . - . ID=gene-C9F07_16855;Name=C9F07_16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16855;partial=true;start_range=.,1 PYKI01001755.1 Protein Homology CDS 1 599 . - 0 ID=cds-TGD68143.1;Parent=gene-C9F07_16855;Dbxref=NCBI_GP:TGD68143.1;Name=TGD68143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=C9F07_16855;partial=true;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=TGD68143.1;start_range=.,1;transl_table=11 PYKI01001755.1 Genbank pseudogene 621 1118 . - . ID=gene-C9F07_16860;Name=C9F07_16860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16860;pseudo=true PYKI01001755.1 Protein Homology CDS 621 1118 . - 0 ID=cds-C9F07_16860;Parent=gene-C9F07_16860;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=C9F07_16860;product=colanic acid exporter;pseudo=true;transl_table=11 ##sequence-region PYKI01001632.1 1 1166 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001632.1 Genbank region 1 1166 . + . ID=PYKI01001632.1:1..1166;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001632.1 Genbank gene 1 868 . + . ID=gene-C9F07_15590;Name=C9F07_15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15590;partial=true;start_range=.,1 PYKI01001632.1 Protein Homology CDS 1 868 . + 1 ID=cds-TGD70474.1;Parent=gene-C9F07_15590;Dbxref=NCBI_GP:TGD70474.1;Name=TGD70474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=C9F07_15590;partial=true;product=intermembrane transport protein PqiB;protein_id=TGD70474.1;start_range=.,1;transl_table=11 PYKI01001632.1 Genbank gene 865 1166 . + . ID=gene-C9F07_15595;Name=C9F07_15595;end_range=1166,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15595;partial=true PYKI01001632.1 Protein Homology CDS 865 1166 . + 0 ID=cds-TGD70475.1;Parent=gene-C9F07_15595;Dbxref=NCBI_GP:TGD70475.1;Name=TGD70475.1;end_range=1166,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455563.1;locus_tag=C9F07_15595;partial=true;product=hypothetical protein;protein_id=TGD70475.1;transl_table=11 ##sequence-region PYKI01001508.1 1 1166 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001508.1 Genbank region 1 1166 . + . ID=PYKI01001508.1:1..1166;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001508.1 Genbank gene 1 380 . - . ID=gene-C9F07_14380;Name=C9F07_14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14380;partial=true;start_range=.,1 PYKI01001508.1 Protein Homology CDS 1 380 . - 0 ID=cds-TGD77536.1;Parent=gene-C9F07_14380;Dbxref=NCBI_GP:TGD77536.1;Name=TGD77536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456147.1;locus_tag=C9F07_14380;partial=true;product=pyruvate kinase;protein_id=TGD77536.1;start_range=.,1;transl_table=11 PYKI01001508.1 Genbank gene 565 879 . + . ID=gene-C9F07_14385;Name=C9F07_14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14385 PYKI01001508.1 Protein Homology CDS 565 879 . + 0 ID=cds-TGD77537.1;Parent=gene-C9F07_14385;Dbxref=NCBI_GP:TGD77537.1;Name=TGD77537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000011320.1;locus_tag=C9F07_14385;product=hypothetical protein;protein_id=TGD77537.1;transl_table=11 PYKI01001508.1 Genbank pseudogene 875 1166 . - . ID=gene-C9F07_14390;Name=C9F07_14390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14390;pseudo=true PYKI01001508.1 Protein Homology CDS 875 1166 . - 1 ID=cds-C9F07_14390;Parent=gene-C9F07_14390;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000756088.1;locus_tag=C9F07_14390;product=amino acid permease;pseudo=true;transl_table=11 ##sequence-region PYKI01002895.1 1 1164 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002895.1 Genbank region 1 1164 . + . ID=PYKI01002895.1:1..1164;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002895.1 Genbank gene 1 542 . - . ID=gene-C9F07_28980;Name=C9F07_28980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28980;partial=true;start_range=.,1 PYKI01002895.1 Protein Homology CDS 1 542 . - 0 ID=cds-TGD44013.1;Parent=gene-C9F07_28980;Dbxref=NCBI_GP:TGD44013.1;Name=TGD44013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456736.1;locus_tag=C9F07_28980;partial=true;product=5-carboxymethyl-2-hydroxymuconate isomerase;protein_id=TGD44013.1;start_range=.,1;transl_table=11 PYKI01002895.1 Genbank gene 558 1164 . - . ID=gene-C9F07_28985;Name=C9F07_28985;end_range=1164,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28985;partial=true PYKI01002895.1 Protein Homology CDS 558 1164 . - 1 ID=cds-TGD44014.1;Parent=gene-C9F07_28985;Dbxref=NCBI_GP:TGD44014.1;Name=TGD44014.1;end_range=1164,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=C9F07_28985;partial=true;product=gentisate 1%2C2-dioxygenase;protein_id=TGD44014.1;transl_table=11 ##sequence-region PYKI01002937.1 1 1164 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002937.1 Genbank region 1 1164 . + . ID=PYKI01002937.1:1..1164;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002937.1 Genbank gene 1 1164 . + . ID=gene-C9F07_29425;Name=C9F07_29425;end_range=1164,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29425;partial=true;start_range=.,1 PYKI01002937.1 Protein Homology CDS 1 1164 . + 2 ID=cds-TGD42795.1;Parent=gene-C9F07_29425;Dbxref=NCBI_GP:TGD42795.1;Name=TGD42795.1;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;end_range=1164,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=C9F07_29425;partial=true;product=tail-specific protease;protein_id=TGD42795.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001566.1 1 1163 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001566.1 Genbank region 1 1163 . + . ID=PYKI01001566.1:1..1163;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001566.1 Genbank gene 1 963 . + . ID=gene-C9F07_14995;Name=C9F07_14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14995;partial=true;start_range=.,1 PYKI01001566.1 Protein Homology CDS 1 963 . + 0 ID=cds-TGD73764.1;Parent=gene-C9F07_14995;Dbxref=NCBI_GP:TGD73764.1;Name=TGD73764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=C9F07_14995;partial=true;product=cytochrome ubiquinol oxidase subunit I;protein_id=TGD73764.1;start_range=.,1;transl_table=11 PYKI01001566.1 Genbank gene 960 1163 . + . ID=gene-C9F07_15000;Name=C9F07_15000;end_range=1163,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15000;partial=true PYKI01001566.1 Protein Homology CDS 960 1163 . + 0 ID=cds-TGD73765.1;Parent=gene-C9F07_15000;Dbxref=NCBI_GP:TGD73765.1;Name=TGD73765.1;end_range=1163,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454956.1;locus_tag=C9F07_15000;partial=true;product=ubiquinol oxidase subunit II;protein_id=TGD73765.1;transl_table=11 ##sequence-region PYKI01002992.1 1 1161 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002992.1 Genbank region 1 1161 . + . ID=PYKI01002992.1:1..1161;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002992.1 Genbank gene 26 940 . + . ID=gene-C9F07_30030;Name=C9F07_30030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30030 PYKI01002992.1 Protein Homology CDS 26 940 . + 0 ID=cds-TGD41334.1;Parent=gene-C9F07_30030;Dbxref=NCBI_GP:TGD41334.1;Name=TGD41334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001691834.1;locus_tag=C9F07_30030;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=TGD41334.1;transl_table=11 PYKI01002992.1 Genbank gene 1057 1161 . - . ID=gene-C9F07_30035;Name=C9F07_30035;end_range=1161,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30035;partial=true PYKI01002992.1 Protein Homology CDS 1057 1161 . - 0 ID=cds-TGD41333.1;Parent=gene-C9F07_30035;Dbxref=NCBI_GP:TGD41333.1;Name=TGD41333.1;end_range=1161,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=C9F07_30035;partial=true;product=Cys-tRNA(Pro) deacylase;protein_id=TGD41333.1;transl_table=11 ##sequence-region PYKI01003387.1 1 1160 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003387.1 Genbank region 1 1160 . + . ID=PYKI01003387.1:1..1160;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003387.1 Genbank gene 1 1055 . + . ID=gene-C9F07_34085;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=C9F07_34085;partial=true;start_range=.,1 PYKI01003387.1 Protein Homology CDS 1 1055 . + 2 ID=cds-TGD34273.1;Parent=gene-C9F07_34085;Dbxref=NCBI_GP:TGD34273.1;Name=TGD34273.1;gbkey=CDS;gene=dsdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458135.1;locus_tag=C9F07_34085;partial=true;product=D-serine ammonia-lyase;protein_id=TGD34273.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000579.1 1 1159 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000579.1 Genbank region 1 1159 . + . ID=PYKI01000579.1:1..1159;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000579.1 Genbank pseudogene 27 182 . - . ID=gene-C9F07_04900;Name=C9F07_04900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04900;pseudo=true PYKI01000579.1 Protein Homology CDS 27 182 . - 0 ID=cds-C9F07_04900;Parent=gene-C9F07_04900;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457989.1;locus_tag=C9F07_04900;product=ATP-dependent 6-phosphofructokinase;pseudo=true;transl_table=11 PYKI01000579.1 Genbank pseudogene 367 1092 . - . ID=gene-C9F07_04905;Name=C9F07_04905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04905;pseudo=true PYKI01000579.1 Protein Homology CDS 367 1092 . - 0 ID=cds-C9F07_04905;Parent=gene-C9F07_04905;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457990.1;locus_tag=C9F07_04905;product=cation-efflux pump FieF;pseudo=true;transl_table=11 ##sequence-region PYKI01001887.1 1 3928 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001887.1 Genbank region 1 3928 . + . ID=PYKI01001887.1:1..3928;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001887.1 Genbank gene 1 603 . - . ID=gene-C9F07_18215;Name=C9F07_18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18215;partial=true;start_range=.,1 PYKI01001887.1 Protein Homology CDS 1 603 . - 0 ID=cds-TGD61921.1;Parent=gene-C9F07_18215;Dbxref=NCBI_GP:TGD61921.1;Name=TGD61921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=C9F07_18215;partial=true;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=TGD61921.1;start_range=.,1;transl_table=11 PYKI01001887.1 cmsearch riboswitch 718 911 . + . ID=id-PYKI01001887.1:718..911;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00174,COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PYKI01001887.1 Genbank gene 977 2821 . + . ID=gene-C9F07_18220;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=C9F07_18220 PYKI01001887.1 Protein Homology CDS 977 2821 . + 0 ID=cds-TGD61922.1;Parent=gene-C9F07_18220;Dbxref=NCBI_GP:TGD61922.1;Name=TGD61922.1;Note=involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space;gbkey=CDS;gene=btuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457930.1;locus_tag=C9F07_18220;product=vitamin B12 transporter BtuB;protein_id=TGD61922.1;transl_table=11 PYKI01001887.1 Genbank gene 2766 3617 . + . ID=gene-C9F07_18225;Name=C9F07_18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18225 PYKI01001887.1 Protein Homology CDS 2766 3617 . + 0 ID=cds-TGD61923.1;Parent=gene-C9F07_18225;Dbxref=NCBI_GP:TGD61923.1;Name=TGD61923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=C9F07_18225;product=glutamate racemase;protein_id=TGD61923.1;transl_table=11 ##sequence-region PYKI01003384.1 1 1159 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003384.1 Genbank region 1 1159 . + . ID=PYKI01003384.1:1..1159;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003384.1 Genbank gene 1 1135 . + . ID=gene-C9F07_34065;Name=C9F07_34065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34065;partial=true;start_range=.,1 PYKI01003384.1 Protein Homology CDS 1 1135 . + 1 ID=cds-TGD34286.1;Parent=gene-C9F07_34065;Dbxref=NCBI_GP:TGD34286.1;Name=TGD34286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083300.1;locus_tag=C9F07_34065;partial=true;product=ATPase;protein_id=TGD34286.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002636.1 1 1158 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002636.1 Genbank region 1 1158 . + . ID=PYKI01002636.1:1..1158;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002636.1 Genbank gene 1 226 . - . ID=gene-C9F07_26230;Name=C9F07_26230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26230;partial=true;start_range=.,1 PYKI01002636.1 Protein Homology CDS 1 226 . - 0 ID=cds-TGD49421.1;Parent=gene-C9F07_26230;Dbxref=NCBI_GP:TGD49421.1;Name=TGD49421.1;Note=activates the transcription of the ethanolamine utilization operon;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=C9F07_26230;partial=true;product=ethanolamine utilization protein EutR;protein_id=TGD49421.1;start_range=.,1;transl_table=11 PYKI01002636.1 Genbank gene 274 768 . - . ID=gene-C9F07_26235;Name=C9F07_26235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26235 PYKI01002636.1 Protein Homology CDS 274 768 . - 0 ID=cds-TGD49419.1;Parent=gene-C9F07_26235;Dbxref=NCBI_GP:TGD49419.1;Name=TGD49419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=C9F07_26235;product=ethanolamine utilization microcompartment protein EutK;protein_id=TGD49419.1;transl_table=11 PYKI01002636.1 Genbank gene 781 1158 . - . ID=gene-C9F07_26240;Name=C9F07_26240;end_range=1158,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26240;partial=true PYKI01002636.1 Protein Homology CDS 781 1158 . - 0 ID=cds-TGD49420.1;Parent=gene-C9F07_26240;Dbxref=NCBI_GP:TGD49420.1;Name=TGD49420.1;end_range=1158,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456991.1;locus_tag=C9F07_26240;partial=true;product=ethanolamine utilization microcompartment protein EutL;protein_id=TGD49420.1;transl_table=11 ##sequence-region PYKI01000645.1 1 1156 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000645.1 Genbank region 1 1156 . + . ID=PYKI01000645.1:1..1156;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000645.1 Genbank gene 54 512 . + . ID=gene-C9F07_05580;Name=C9F07_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05580 PYKI01000645.1 Protein Homology CDS 54 512 . + 0 ID=cds-TGE12605.1;Parent=gene-C9F07_05580;Dbxref=NCBI_GP:TGE12605.1;Name=TGE12605.1;Note=MraZ%3B UPF0040%3B crystal structure shows similarity to AbrB;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459124.1;locus_tag=C9F07_05580;product=cell division/cell wall cluster transcriptional repressor MraZ;protein_id=TGE12605.1;transl_table=11 PYKI01000645.1 Genbank pseudogene 514 1092 . + . ID=gene-C9F07_05585;Name=C9F07_05585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05585;pseudo=true PYKI01000645.1 Protein Homology CDS 514 1092 . + 0 ID=cds-C9F07_05585;Parent=gene-C9F07_05585;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=C9F07_05585;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01002152.1 1 1156 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002152.1 Genbank region 1 1156 . + . ID=PYKI01002152.1:1..1156;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002152.1 Genbank gene 1 239 . - . ID=gene-C9F07_20900;Name=C9F07_20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20900;partial=true;start_range=.,1 PYKI01002152.1 Protein Homology CDS 1 239 . - 0 ID=cds-TGD57457.1;Parent=gene-C9F07_20900;Dbxref=NCBI_GP:TGD57457.1;Name=TGD57457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456067.1;locus_tag=C9F07_20900;partial=true;product=adenosine deaminase;protein_id=TGD57457.1;start_range=.,1;transl_table=11 PYKI01002152.1 Genbank pseudogene 457 1156 . - . ID=gene-C9F07_20905;Name=C9F07_20905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20905;pseudo=true PYKI01002152.1 Protein Homology CDS 457 1156 . - 1 ID=cds-C9F07_20905;Parent=gene-C9F07_20905;Note=catalyzes the formation of homocysteine and pyruvate from cystathionine%3B also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459422.1;locus_tag=C9F07_20905;product=transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01000343.1 1 1155 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000343.1 Genbank region 1 1155 . + . ID=PYKI01000343.1:1..1155;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000343.1 Genbank gene 1 1001 . + . ID=gene-C9F07_02540;Name=C9F07_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02540;partial=true;start_range=.,1 PYKI01000343.1 Protein Homology CDS 1 1001 . + 2 ID=cds-TGE26831.1;Parent=gene-C9F07_02540;Dbxref=NCBI_GP:TGE26831.1;Name=TGE26831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=C9F07_02540;partial=true;product=crotonobetainyl-CoA dehydrogenase;protein_id=TGE26831.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003314.1 1 1155 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003314.1 Genbank region 1 1155 . + . ID=PYKI01003314.1:1..1155;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003314.1 Genbank gene 1 170 . - . ID=gene-C9F07_33330;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=C9F07_33330;partial=true;start_range=.,1 PYKI01003314.1 Protein Homology CDS 1 170 . - 0 ID=cds-TGD35991.1;Parent=gene-C9F07_33330;Dbxref=NCBI_GP:TGD35991.1;Name=TGD35991.1;Note=required for the assembly of the flagellar basal body P-ring;gbkey=CDS;gene=flgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=C9F07_33330;partial=true;product=flagellar basal body P-ring formation protein FlgA;protein_id=TGD35991.1;start_range=.,1;transl_table=11 PYKI01003314.1 Genbank pseudogene 100 307 . + . ID=gene-C9F07_33335;Name=C9F07_33335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33335;pseudo=true PYKI01003314.1 Protein Homology CDS 100 307 . + 0 ID=cds-C9F07_33335;Parent=gene-C9F07_33335;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005116827.1;locus_tag=C9F07_33335;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01003314.1 Genbank gene 327 743 . + . ID=gene-C9F07_33340;Name=C9F07_33340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33340 PYKI01003314.1 Protein Homology CDS 327 743 . + 0 ID=cds-TGD35989.1;Parent=gene-C9F07_33340;Dbxref=NCBI_GP:TGD35989.1;Name=TGD35989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=C9F07_33340;product=flagellar biosynthesis protein FlgB;protein_id=TGD35989.1;transl_table=11 PYKI01003314.1 Genbank gene 747 1151 . + . ID=gene-C9F07_33345;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=C9F07_33345 PYKI01003314.1 Protein Homology CDS 747 1151 . + 0 ID=cds-TGD35990.1;Parent=gene-C9F07_33345;Dbxref=NCBI_GP:TGD35990.1;Name=TGD35990.1;gbkey=CDS;gene=flgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=C9F07_33345;product=flagellar basal body rod protein FlgC;protein_id=TGD35990.1;transl_table=11 ##sequence-region PYKI01002697.1 1 1154 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002697.1 Genbank region 1 1154 . + . ID=PYKI01002697.1:1..1154;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002697.1 Genbank gene 197 1154 . + . ID=gene-C9F07_26905;Name=C9F07_26905;end_range=1154,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26905;partial=true PYKI01002697.1 Protein Homology CDS 197 1154 . + 0 ID=cds-TGD48167.1;Parent=gene-C9F07_26905;Dbxref=NCBI_GP:TGD48167.1;Name=TGD48167.1;end_range=1154,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456700.1;locus_tag=C9F07_26905;partial=true;product=class I fructose-bisphosphate aldolase;protein_id=TGD48167.1;transl_table=11 ##sequence-region PYKI01001456.1 1 1153 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001456.1 Genbank region 1 1153 . + . ID=PYKI01001456.1:1..1153;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001456.1 Genbank gene 1 75 . + . ID=gene-C9F07_13810;Name=C9F07_13810;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_13810 PYKI01001456.1 tRNAscan-SE tRNA 1 75 . + . ID=rna-C9F07_13810;Parent=gene-C9F07_13810;anticodon=(pos:33..35);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_13810;product=tRNA-Lys PYKI01001456.1 tRNAscan-SE exon 1 75 . + . ID=exon-C9F07_13810-1;Parent=rna-C9F07_13810;anticodon=(pos:33..35);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_13810;product=tRNA-Lys PYKI01001456.1 Genbank gene 210 285 . + . ID=gene-C9F07_13815;Name=C9F07_13815;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_13815 PYKI01001456.1 tRNAscan-SE tRNA 210 285 . + . ID=rna-C9F07_13815;Parent=gene-C9F07_13815;anticodon=(pos:243..245);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_13815;product=tRNA-Lys PYKI01001456.1 tRNAscan-SE exon 210 285 . + . ID=exon-C9F07_13815-1;Parent=rna-C9F07_13815;anticodon=(pos:243..245);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_13815;product=tRNA-Lys PYKI01001456.1 Genbank gene 315 440 . + . ID=gene-C9F07_13820;Name=C9F07_13820;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F07_13820 PYKI01001456.1 cmsearch ncRNA 315 440 . + . ID=rna-C9F07_13820;Parent=gene-C9F07_13820;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_13820;product=RtT sRNA PYKI01001456.1 cmsearch exon 315 440 . + . ID=exon-C9F07_13820-1;Parent=rna-C9F07_13820;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_13820;product=RtT sRNA PYKI01001456.1 Genbank gene 735 1153 . + . ID=gene-C9F07_13825;Name=C9F07_13825;end_range=1153,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13825;partial=true PYKI01001456.1 Protein Homology CDS 735 1153 . + 0 ID=cds-TGD82208.1;Parent=gene-C9F07_13825;Dbxref=NCBI_GP:TGD82208.1;Name=TGD82208.1;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;end_range=1153,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=C9F07_13825;partial=true;product=quinolinate synthase;protein_id=TGD82208.1;transl_table=11 ##sequence-region PYKI01001019.1 1 1153 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001019.1 Genbank region 1 1153 . + . ID=PYKI01001019.1:1..1153;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001019.1 Genbank pseudogene 61 438 . - . ID=gene-C9F07_09360;Name=C9F07_09360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09360;pseudo=true PYKI01001019.1 Protein Homology CDS 61 438 . - 0 ID=cds-C9F07_09360;Parent=gene-C9F07_09360;Note=catalyzes the cleavage of the bond between muamic acid and l-alanine%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455421.1;locus_tag=C9F07_09360;product=N-acetylmuramoyl-L-alanine amidase;pseudo=true;transl_table=11 PYKI01001019.1 Genbank gene 435 758 . - . ID=gene-C9F07_09365;Name=C9F07_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09365 PYKI01001019.1 Protein Homology CDS 435 758 . - 0 ID=cds-TGD97546.1;Parent=gene-C9F07_09365;Dbxref=NCBI_GP:TGD97546.1;Name=TGD97546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455420.1;locus_tag=C9F07_09365;product=hypothetical protein;protein_id=TGD97546.1;transl_table=11 PYKI01001019.1 Genbank pseudogene 886 1050 . + . ID=gene-C9F07_09370;Name=C9F07_09370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09370;pseudo=true PYKI01001019.1 Protein Homology CDS 886 1050 . + 0 ID=cds-C9F07_09370;Parent=gene-C9F07_09370;Note=induced during stationary phase and by acivicin (a glutamine analog)%3B regulated by Lrp and RpoS%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455419.1;locus_tag=C9F07_09370;product=lipoprotein;pseudo=true;transl_table=11 ##sequence-region PYKI01003365.1 1 3924 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003365.1 Genbank region 1 3924 . + . ID=PYKI01003365.1:1..3924;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003365.1 Genbank pseudogene 76 2064 . - . ID=gene-C9F07_33895;Name=carB;gbkey=Gene;gene=carB;gene_biotype=pseudogene;locus_tag=C9F07_33895;pseudo=true PYKI01003365.1 Protein Homology CDS 76 2064 . - 0 ID=cds-C9F07_33895;Parent=gene-C9F07_33895;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=carB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=C9F07_33895;product=carbamoyl phosphate synthase large subunit;pseudo=true;transl_table=11 PYKI01003365.1 Genbank gene 2083 3231 . - . ID=gene-C9F07_33900;Name=C9F07_33900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33900 PYKI01003365.1 Protein Homology CDS 2083 3231 . - 0 ID=cds-TGD34715.1;Parent=gene-C9F07_33900;Dbxref=NCBI_GP:TGD34715.1;Name=TGD34715.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=C9F07_33900;product=carbamoyl-phosphate synthase small subunit;protein_id=TGD34715.1;transl_table=11 PYKI01003365.1 Genbank pseudogene 3733 3924 . - . ID=gene-C9F07_33905;Name=C9F07_33905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33905;pseudo=true PYKI01003365.1 Protein Homology CDS 3733 3924 . - 2 ID=cds-C9F07_33905;Parent=gene-C9F07_33905;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446529.1;locus_tag=C9F07_33905;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001537.1 1 1153 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001537.1 Genbank region 1 1153 . + . ID=PYKI01001537.1:1..1153;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001537.1 Genbank gene 1 1153 . + . ID=gene-C9F07_14715;Name=C9F07_14715;end_range=1153,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14715;partial=true;start_range=.,1 PYKI01001537.1 Protein Homology CDS 1 1153 . + 2 ID=cds-TGD75551.1;Parent=gene-C9F07_14715;Dbxref=NCBI_GP:TGD75551.1;Name=TGD75551.1;end_range=1153,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455573.1;locus_tag=C9F07_14715;partial=true;product=DNA helicase IV;protein_id=TGD75551.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002425.1 1 1152 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002425.1 Genbank region 1 1152 . + . ID=PYKI01002425.1:1..1152;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002425.1 Genbank gene 1 634 . - . ID=gene-C9F07_23970;Name=C9F07_23970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23970;partial=true;start_range=.,1 PYKI01002425.1 Protein Homology CDS 1 634 . - 0 ID=cds-TGD51372.1;Parent=gene-C9F07_23970;Dbxref=NCBI_GP:TGD51372.1;Name=TGD51372.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458200.1;locus_tag=C9F07_23970;partial=true;product=DNA-formamidopyrimidine glycosylase;protein_id=TGD51372.1;start_range=.,1;transl_table=11 PYKI01002425.1 Genbank gene 732 899 . - . ID=gene-C9F07_23975;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=C9F07_23975 PYKI01002425.1 Protein Homology CDS 732 899 . - 0 ID=cds-TGD51373.1;Parent=gene-C9F07_23975;Dbxref=NCBI_GP:TGD51373.1;Name=TGD51373.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=C9F07_23975;product=50S ribosomal protein L33;protein_id=TGD51373.1;transl_table=11 PYKI01002425.1 Genbank gene 920 1152 . - . ID=gene-C9F07_23980;Name=C9F07_23980;end_range=1152,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23980;partial=true PYKI01002425.1 Protein Homology CDS 920 1152 . - 2 ID=cds-TGD51374.1;Parent=gene-C9F07_23980;Dbxref=NCBI_GP:TGD51374.1;Name=TGD51374.1;end_range=1152,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=C9F07_23980;partial=true;product=50S ribosomal protein L28;protein_id=TGD51374.1;transl_table=11 ##sequence-region PYKI01002103.1 1 1152 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002103.1 Genbank region 1 1152 . + . ID=PYKI01002103.1:1..1152;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002103.1 Genbank gene 31 1152 . + . ID=gene-C9F07_20415;Name=pgtB;end_range=1152,.;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=C9F07_20415;partial=true PYKI01002103.1 Protein Homology CDS 31 1152 . + 0 ID=cds-TGD58778.1;Parent=gene-C9F07_20415;Dbxref=NCBI_GP:TGD58778.1;Name=TGD58778.1;end_range=1152,.;gbkey=CDS;gene=pgtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001802596.1;locus_tag=C9F07_20415;partial=true;product=two-component system sensor histidine kinase PgtB;protein_id=TGD58778.1;transl_table=11 ##sequence-region PYKI01003129.1 1 1150 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003129.1 Genbank region 1 1150 . + . ID=PYKI01003129.1:1..1150;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003129.1 Genbank gene 1 532 . - . ID=gene-C9F07_31325;Name=C9F07_31325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31325;partial=true;start_range=.,1 PYKI01003129.1 Protein Homology CDS 1 532 . - 0 ID=cds-TGD39137.1;Parent=gene-C9F07_31325;Dbxref=NCBI_GP:TGD39137.1;Name=TGD39137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000370994.1;locus_tag=C9F07_31325;partial=true;product=phosphoenolpyruvate synthase regulatory protein;protein_id=TGD39137.1;start_range=.,1;transl_table=11 PYKI01003129.1 Genbank gene 869 1150 . + . ID=gene-C9F07_31330;Name=C9F07_31330;end_range=1150,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31330;partial=true PYKI01003129.1 Protein Homology CDS 869 1150 . + 0 ID=cds-TGD39138.1;Parent=gene-C9F07_31330;Dbxref=NCBI_GP:TGD39138.1;Name=TGD39138.1;end_range=1150,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000069371.1;locus_tag=C9F07_31330;partial=true;product=phosphoenolpyruvate synthase;protein_id=TGD39138.1;transl_table=11 ##sequence-region PYKI01002849.1 1 1150 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002849.1 Genbank region 1 1150 . + . ID=PYKI01002849.1:1..1150;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002849.1 Genbank gene 1 435 . - . ID=gene-C9F07_28480;Name=C9F07_28480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28480;partial=true;start_range=.,1 PYKI01002849.1 Protein Homology CDS 1 435 . - 0 ID=cds-TGD45542.1;Parent=gene-C9F07_28480;Dbxref=NCBI_GP:TGD45542.1;Name=TGD45542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456055.1;locus_tag=C9F07_28480;partial=true;product=arginine:ornithine antiporter;protein_id=TGD45542.1;start_range=.,1;transl_table=11 PYKI01002849.1 Genbank gene 733 1150 . - . ID=gene-C9F07_28485;Name=C9F07_28485;end_range=1150,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28485;partial=true PYKI01002849.1 Protein Homology CDS 733 1150 . - 1 ID=cds-TGD45541.1;Parent=gene-C9F07_28485;Dbxref=NCBI_GP:TGD45541.1;Name=TGD45541.1;end_range=1150,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456002.1;locus_tag=C9F07_28485;partial=true;product=hypothetical protein;protein_id=TGD45541.1;transl_table=11 ##sequence-region PYKI01000591.1 1 1150 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000591.1 Genbank region 1 1150 . + . ID=PYKI01000591.1:1..1150;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000591.1 Genbank gene 1 201 . - . ID=gene-C9F07_05055;Name=C9F07_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05055;partial=true;start_range=.,1 PYKI01000591.1 Protein Homology CDS 1 201 . - 0 ID=cds-TGE14199.1;Parent=gene-C9F07_05055;Dbxref=NCBI_GP:TGE14199.1;Name=TGE14199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=C9F07_05055;partial=true;product=serine hydroxymethyltransferase;protein_id=TGE14199.1;start_range=.,1;transl_table=11 PYKI01000591.1 Genbank gene 526 1150 . + . ID=gene-C9F07_05060;Name=C9F07_05060;end_range=1150,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05060;partial=true PYKI01000591.1 Protein Homology CDS 526 1150 . + 0 ID=cds-TGE14198.1;Parent=gene-C9F07_05060;Dbxref=NCBI_GP:TGE14198.1;Name=TGE14198.1;Note=flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine;end_range=1150,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457086.1;locus_tag=C9F07_05060;partial=true;product=NO-inducible flavohemoprotein;protein_id=TGE14198.1;transl_table=11 ##sequence-region PYKI01002409.1 1 1148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002409.1 Genbank region 1 1148 . + . ID=PYKI01002409.1:1..1148;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002409.1 Genbank gene 1 567 . + . ID=gene-C9F07_23815;Name=C9F07_23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23815;partial=true;start_range=.,1 PYKI01002409.1 Protein Homology CDS 1 567 . + 0 ID=cds-TGD51729.1;Parent=gene-C9F07_23815;Dbxref=NCBI_GP:TGD51729.1;Name=TGD51729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=C9F07_23815;partial=true;product=LamB/YcsF family protein;protein_id=TGD51729.1;start_range=.,1;transl_table=11 PYKI01002409.1 Genbank gene 891 1022 . + . ID=gene-C9F07_23820;Name=C9F07_23820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23820 PYKI01002409.1 Protein Homology CDS 891 1022 . + 0 ID=cds-TGD51730.1;Parent=gene-C9F07_23820;Dbxref=NCBI_GP:TGD51730.1;Name=TGD51730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459700.1;locus_tag=C9F07_23820;product=hypothetical protein;protein_id=TGD51730.1;transl_table=11 ##sequence-region PYKI01002835.1 1 1148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002835.1 Genbank region 1 1148 . + . ID=PYKI01002835.1:1..1148;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002835.1 Genbank gene 306 1148 . - . ID=gene-C9F07_28360;Name=C9F07_28360;end_range=1148,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28360;partial=true PYKI01002835.1 Protein Homology CDS 306 1148 . - 0 ID=cds-TGD45580.1;Parent=gene-C9F07_28360;Dbxref=NCBI_GP:TGD45580.1;Name=TGD45580.1;Note=catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate;end_range=1148,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=C9F07_28360;partial=true;product=glucose-6-phosphate dehydrogenase;protein_id=TGD45580.1;transl_table=11 ##sequence-region PYKI01002148.1 1 1147 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002148.1 Genbank region 1 1147 . + . ID=PYKI01002148.1:1..1147;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002148.1 Genbank gene 1 449 . + . ID=gene-C9F07_20865;Name=C9F07_20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20865;partial=true;start_range=.,1 PYKI01002148.1 Protein Homology CDS 1 449 . + 2 ID=cds-TGD57467.1;Parent=gene-C9F07_20865;Dbxref=NCBI_GP:TGD57467.1;Name=TGD57467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458570.1;locus_tag=C9F07_20865;partial=true;product=murein hydrolase effector protein LrgB;protein_id=TGD57467.1;start_range=.,1;transl_table=11 PYKI01002148.1 Genbank gene 488 1147 . - . ID=gene-C9F07_20870;Name=actP;end_range=1147,.;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=C9F07_20870;partial=true PYKI01002148.1 Protein Homology CDS 488 1147 . - 0 ID=cds-TGD57468.1;Parent=gene-C9F07_20870;Dbxref=NCBI_GP:TGD57468.1;Name=TGD57468.1;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake;end_range=1147,.;gbkey=CDS;gene=actP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132593.1;locus_tag=C9F07_20870;partial=true;product=cation acetate symporter;protein_id=TGD57468.1;transl_table=11 ##sequence-region PYKI01000931.1 1 1146 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000931.1 Genbank region 1 1146 . + . ID=PYKI01000931.1:1..1146;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000931.1 Genbank gene 1 370 . + . ID=gene-C9F07_08495;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=C9F07_08495;partial=true;start_range=.,1 PYKI01000931.1 Protein Homology CDS 1 370 . + 1 ID=cds-TGE02745.1;Parent=gene-C9F07_08495;Dbxref=NCBI_GP:TGE02745.1;Name=TGE02745.1;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;gbkey=CDS;gene=hemA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456287.1;locus_tag=C9F07_08495;partial=true;product=glutamyl-tRNA reductase;protein_id=TGE02745.1;start_range=.,1;transl_table=11 PYKI01000931.1 Genbank gene 411 1146 . + . ID=gene-C9F07_08500;Name=C9F07_08500;end_range=1146,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08500;partial=true PYKI01000931.1 Protein Homology CDS 411 1146 . + 0 ID=cds-TGE02746.1;Parent=gene-C9F07_08500;Dbxref=NCBI_GP:TGE02746.1;Name=TGE02746.1;end_range=1146,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=C9F07_08500;partial=true;product=peptide chain release factor 1;protein_id=TGE02746.1;transl_table=11 ##sequence-region PYKI01002672.1 1 3897 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002672.1 Genbank region 1 3897 . + . ID=PYKI01002672.1:1..3897;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002672.1 Genbank gene 1 591 . + . ID=gene-C9F07_26610;Name=C9F07_26610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26610;partial=true;start_range=.,1 PYKI01002672.1 Protein Homology CDS 1 591 . + 0 ID=cds-TGD48849.1;Parent=gene-C9F07_26610;Dbxref=NCBI_GP:TGD48849.1;Name=TGD48849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455919.1;locus_tag=C9F07_26610;partial=true;product=nitrate reductase subunit alpha;protein_id=TGD48849.1;start_range=.,1;transl_table=11 PYKI01002672.1 Genbank gene 588 2132 . + . ID=gene-C9F07_26615;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=C9F07_26615 PYKI01002672.1 Protein Homology CDS 588 2132 . + 0 ID=cds-TGD48845.1;Parent=gene-C9F07_26615;Dbxref=NCBI_GP:TGD48845.1;Name=TGD48845.1;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455918.1;locus_tag=C9F07_26615;product=nitrate reductase subunit beta;protein_id=TGD48845.1;transl_table=11 PYKI01002672.1 Genbank gene 2132 2827 . + . ID=gene-C9F07_26620;Name=C9F07_26620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26620 PYKI01002672.1 Protein Homology CDS 2132 2827 . + 0 ID=cds-TGD48846.1;Parent=gene-C9F07_26620;Dbxref=NCBI_GP:TGD48846.1;Name=TGD48846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455917.1;locus_tag=C9F07_26620;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=TGD48846.1;transl_table=11 PYKI01002672.1 Genbank gene 2824 3504 . + . ID=gene-C9F07_26625;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=C9F07_26625 PYKI01002672.1 Protein Homology CDS 2824 3504 . + 0 ID=cds-TGD48847.1;Parent=gene-C9F07_26625;Dbxref=NCBI_GP:TGD48847.1;Name=TGD48847.1;gbkey=CDS;gene=narI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=C9F07_26625;product=respiratory nitrate reductase subunit gamma;protein_id=TGD48847.1;transl_table=11 PYKI01002672.1 Genbank gene 3610 3897 . + . ID=gene-C9F07_26630;Name=C9F07_26630;end_range=3897,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26630;partial=true PYKI01002672.1 Protein Homology CDS 3610 3897 . + 0 ID=cds-TGD48848.1;Parent=gene-C9F07_26630;Dbxref=NCBI_GP:TGD48848.1;Name=TGD48848.1;end_range=3897,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455915.1;locus_tag=C9F07_26630;partial=true;product=hypothetical protein;protein_id=TGD48848.1;transl_table=11 ##sequence-region PYKI01001262.1 1 1145 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001262.1 Genbank region 1 1145 . + . ID=PYKI01001262.1:1..1145;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001262.1 Genbank gene 96 428 . + . ID=gene-C9F07_11785;Name=C9F07_11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11785 PYKI01001262.1 Protein Homology CDS 96 428 . + 0 ID=cds-TGD89435.1;Parent=gene-C9F07_11785;Dbxref=NCBI_GP:TGD89435.1;Name=TGD89435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457672.1;locus_tag=C9F07_11785;product=preprotein translocase subunit SecG;protein_id=TGD89435.1;transl_table=11 PYKI01001262.1 Genbank gene 442 528 . + . ID=gene-C9F07_11790;Name=C9F07_11790;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_11790 PYKI01001262.1 tRNAscan-SE tRNA 442 528 . + . ID=rna-C9F07_11790;Parent=gene-C9F07_11790;anticodon=(pos:476..478);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_11790;product=tRNA-Leu PYKI01001262.1 tRNAscan-SE exon 442 528 . + . ID=exon-C9F07_11790-1;Parent=rna-C9F07_11790;anticodon=(pos:476..478);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_11790;product=tRNA-Leu PYKI01001262.1 Genbank gene 571 792 . + . ID=gene-C9F07_11795;Name=C9F07_11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11795 PYKI01001262.1 Protein Homology CDS 571 792 . + 0 ID=cds-TGD89436.1;Parent=gene-C9F07_11795;Dbxref=NCBI_GP:TGD89436.1;Name=TGD89436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001614109.1;locus_tag=C9F07_11795;product=hypothetical protein;protein_id=TGD89436.1;transl_table=11 PYKI01001262.1 Genbank gene 730 1145 . - . ID=gene-C9F07_11800;Name=C9F07_11800;end_range=1145,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11800;partial=true PYKI01001262.1 Protein Homology CDS 730 1145 . - 2 ID=cds-TGD89437.1;Parent=gene-C9F07_11800;Dbxref=NCBI_GP:TGD89437.1;Name=TGD89437.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;end_range=1145,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462202.3;locus_tag=C9F07_11800;partial=true;product=argininosuccinate synthase;protein_id=TGD89437.1;transl_table=11 ##sequence-region PYKI01001952.1 1 1145 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001952.1 Genbank region 1 1145 . + . ID=PYKI01001952.1:1..1145;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001952.1 Genbank pseudogene 71 934 . - . ID=gene-C9F07_18835;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=pseudogene;locus_tag=C9F07_18835;pseudo=true PYKI01001952.1 Protein Homology CDS 71 934 . - 0 ID=cds-C9F07_18835;Parent=gene-C9F07_18835;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=C9F07_18835;product=EF-P beta-lysylation protein EpmB;pseudo=true;transl_table=11 PYKI01001952.1 Genbank gene 975 1145 . + . ID=gene-C9F07_18840;Name=C9F07_18840;end_range=1145,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18840;partial=true PYKI01001952.1 Protein Homology CDS 975 1145 . + 0 ID=cds-TGD60489.1;Parent=gene-C9F07_18840;Dbxref=NCBI_GP:TGD60489.1;Name=TGD60489.1;end_range=1145,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=C9F07_18840;partial=true;product=hypothetical protein;protein_id=TGD60489.1;transl_table=11 ##sequence-region PYKI01002748.1 1 1143 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002748.1 Genbank region 1 1143 . + . ID=PYKI01002748.1:1..1143;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002748.1 Genbank gene 1 414 . + . ID=gene-C9F07_27430;Name=C9F07_27430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27430;partial=true;start_range=.,1 PYKI01002748.1 Protein Homology CDS 1 414 . + 0 ID=cds-TGD46986.1;Parent=gene-C9F07_27430;Dbxref=NCBI_GP:TGD46986.1;Name=TGD46986.1;Note=YbhB%3B similar to rat and human kinase inhibitory proteins;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455334.1;locus_tag=C9F07_27430;partial=true;product=kinase inhibitor;protein_id=TGD46986.1;start_range=.,1;transl_table=11 PYKI01002748.1 Genbank gene 499 1143 . - . ID=gene-C9F07_27435;Name=C9F07_27435;end_range=1143,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27435;partial=true PYKI01002748.1 Protein Homology CDS 499 1143 . - 0 ID=cds-TGD46987.1;Parent=gene-C9F07_27435;Dbxref=NCBI_GP:TGD46987.1;Name=TGD46987.1;Note=catalyzes the degradation of histidine to urocanate and ammmonia;end_range=1143,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=C9F07_27435;partial=true;product=histidine ammonia-lyase;protein_id=TGD46987.1;transl_table=11 ##sequence-region PYKI01002899.1 1 1143 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002899.1 Genbank region 1 1143 . + . ID=PYKI01002899.1:1..1143;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002899.1 Genbank gene 1 186 . - . ID=gene-C9F07_29035;Name=C9F07_29035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29035;partial=true;start_range=.,1 PYKI01002899.1 Protein Homology CDS 1 186 . - 0 ID=cds-TGD43716.1;Parent=gene-C9F07_29035;Dbxref=NCBI_GP:TGD43716.1;Name=TGD43716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455776.1;locus_tag=C9F07_29035;partial=true;product=phosphatase;protein_id=TGD43716.1;start_range=.,1;transl_table=11 PYKI01002899.1 Genbank gene 308 352 . + . ID=gene-C9F07_29040;Name=C9F07_29040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29040 PYKI01002899.1 Protein Homology CDS 308 352 . + 0 ID=cds-TGD43718.1;Parent=gene-C9F07_29040;Dbxref=NCBI_GP:TGD43718.1;Name=TGD43718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=C9F07_29040;product=trp operon leader peptide;protein_id=TGD43718.1;transl_table=11 PYKI01002899.1 Genbank gene 447 1143 . + . ID=gene-C9F07_29045;Name=C9F07_29045;end_range=1143,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29045;partial=true PYKI01002899.1 Protein Homology CDS 447 1143 . + 0 ID=cds-TGD43717.1;Parent=gene-C9F07_29045;Dbxref=NCBI_GP:TGD43717.1;Name=TGD43717.1;end_range=1143,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455775.1;locus_tag=C9F07_29045;partial=true;product=anthranilate synthase component I;protein_id=TGD43717.1;transl_table=11 ##sequence-region PYKI01002677.1 1 1141 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002677.1 Genbank region 1 1141 . + . ID=PYKI01002677.1:1..1141;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002677.1 Genbank gene 1 1084 . - . ID=gene-C9F07_26680;Name=C9F07_26680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26680;partial=true;start_range=.,1 PYKI01002677.1 Protein Homology CDS 1 1084 . - 0 ID=cds-TGD48790.1;Parent=gene-C9F07_26680;Dbxref=NCBI_GP:TGD48790.1;Name=TGD48790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014343819.1;locus_tag=C9F07_26680;partial=true;product=hypothetical protein;protein_id=TGD48790.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003261.1 1 1140 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003261.1 Genbank region 1 1140 . + . ID=PYKI01003261.1:1..1140;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003261.1 Genbank gene 3 221 . + . ID=gene-C9F07_32785;Name=C9F07_32785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32785 PYKI01003261.1 Protein Homology CDS 3 221 . + 0 ID=cds-TGD36258.1;Parent=gene-C9F07_32785;Dbxref=NCBI_GP:TGD36258.1;Name=TGD36258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=C9F07_32785;product=hypothetical protein;protein_id=TGD36258.1;transl_table=11 PYKI01003261.1 Genbank gene 416 886 . + . ID=gene-C9F07_32790;Name=C9F07_32790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32790 PYKI01003261.1 Protein Homology CDS 416 886 . + 0 ID=cds-TGD36259.1;Parent=gene-C9F07_32790;Dbxref=NCBI_GP:TGD36259.1;Name=TGD36259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456260.1;locus_tag=C9F07_32790;product=heat-shock protein;protein_id=TGD36259.1;transl_table=11 ##sequence-region PYKI01002032.1 1 1139 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002032.1 Genbank region 1 1139 . + . ID=PYKI01002032.1:1..1139;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002032.1 Genbank pseudogene 1 1029 . + . ID=gene-C9F07_19630;Name=C9F07_19630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19630;pseudo=true PYKI01002032.1 Protein Homology CDS 1 1029 . + 0 ID=cds-C9F07_19630;Parent=gene-C9F07_19630;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=C9F07_19630;product=sulfate adenylyltransferase subunit CysN;pseudo=true;transl_table=11 ##sequence-region PYKI01001397.1 1 1139 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001397.1 Genbank region 1 1139 . + . ID=PYKI01001397.1:1..1139;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001397.1 Genbank gene 192 1139 . - . ID=gene-C9F07_13220;Name=C9F07_13220;end_range=1139,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13220;partial=true PYKI01001397.1 Protein Homology CDS 192 1139 . - 0 ID=cds-TGD84046.1;Parent=gene-C9F07_13220;Dbxref=NCBI_GP:TGD84046.1;Name=TGD84046.1;end_range=1139,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455722.1;locus_tag=C9F07_13220;partial=true;product=two-component system sensor histidine kinase PhoQ;protein_id=TGD84046.1;transl_table=11 ##sequence-region PYKI01001120.1 1 1138 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001120.1 Genbank region 1 1138 . + . ID=PYKI01001120.1:1..1138;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001120.1 Genbank gene 49 987 . - . ID=gene-C9F07_10440;Name=C9F07_10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10440 PYKI01001120.1 Protein Homology CDS 49 987 . - 0 ID=cds-TGD94872.1;Parent=gene-C9F07_10440;Dbxref=NCBI_GP:TGD94872.1;Name=TGD94872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455605.1;locus_tag=C9F07_10440;product=MBL fold metallo-hydrolase;protein_id=TGD94872.1;transl_table=11 ##sequence-region PYKI01003536.1 1 1138 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003536.1 Genbank region 1 1138 . + . ID=PYKI01003536.1:1..1138;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003536.1 Genbank gene 1 290 . - . ID=gene-C9F07_35695;Name=C9F07_35695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35695;partial=true;start_range=.,1 PYKI01003536.1 Protein Homology CDS 1 290 . - 0 ID=cds-TGD31080.1;Parent=gene-C9F07_35695;Dbxref=NCBI_GP:TGD31080.1;Name=TGD31080.1;Note=binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458057.1;locus_tag=C9F07_35695;partial=true;product=transcriptional repressor PurR;protein_id=TGD31080.1;start_range=.,1;transl_table=11 PYKI01003536.1 Genbank gene 294 1138 . - . ID=gene-C9F07_35700;Name=C9F07_35700;end_range=1138,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35700;partial=true PYKI01003536.1 Protein Homology CDS 294 1138 . - 2 ID=cds-TGD31079.1;Parent=gene-C9F07_35700;Dbxref=NCBI_GP:TGD31079.1;Name=TGD31079.1;end_range=1138,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458058.1;locus_tag=C9F07_35700;partial=true;product=ribokinase;protein_id=TGD31079.1;transl_table=11 ##sequence-region PYKI01003433.1 1 3885 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003433.1 Genbank region 1 3885 . + . ID=PYKI01003433.1:1..3885;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003433.1 Genbank gene 1 222 . + . ID=gene-C9F07_34495;Name=C9F07_34495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34495;partial=true;start_range=.,1 PYKI01003433.1 Protein Homology CDS 1 222 . + 0 ID=cds-TGD33513.1;Parent=gene-C9F07_34495;Dbxref=NCBI_GP:TGD33513.1;Name=TGD33513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=C9F07_34495;partial=true;product=NADH-quinone oxidoreductase subunit H;protein_id=TGD33513.1;start_range=.,1;transl_table=11 PYKI01003433.1 Genbank gene 237 779 . + . ID=gene-C9F07_34500;Name=C9F07_34500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34500 PYKI01003433.1 Protein Homology CDS 237 779 . + 0 ID=cds-TGD33514.1;Parent=gene-C9F07_34500;Dbxref=NCBI_GP:TGD33514.1;Name=TGD33514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=C9F07_34500;product=NADH-quinone oxidoreductase subunit I;protein_id=TGD33514.1;transl_table=11 PYKI01003433.1 Genbank gene 790 1344 . + . ID=gene-C9F07_34505;Name=C9F07_34505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34505 PYKI01003433.1 Protein Homology CDS 790 1344 . + 0 ID=cds-TGD33515.1;Parent=gene-C9F07_34505;Dbxref=NCBI_GP:TGD33515.1;Name=TGD33515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774950.1;locus_tag=C9F07_34505;product=NADH-quinone oxidoreductase subunit J;protein_id=TGD33515.1;transl_table=11 PYKI01003433.1 Genbank gene 1341 1643 . + . ID=gene-C9F07_34510;Name=C9F07_34510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34510 PYKI01003433.1 Protein Homology CDS 1341 1643 . + 0 ID=cds-TGD33516.1;Parent=gene-C9F07_34510;Dbxref=NCBI_GP:TGD33516.1;Name=TGD33516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=C9F07_34510;product=NADH-quinone oxidoreductase subunit K;protein_id=TGD33516.1;transl_table=11 PYKI01003433.1 Genbank gene 1640 3481 . + . ID=gene-C9F07_34515;Name=C9F07_34515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34515 PYKI01003433.1 Protein Homology CDS 1640 3481 . + 0 ID=cds-TGD33517.1;Parent=gene-C9F07_34515;Dbxref=NCBI_GP:TGD33517.1;Name=TGD33517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=C9F07_34515;product=NADH-quinone oxidoreductase subunit L;protein_id=TGD33517.1;transl_table=11 PYKI01003433.1 Genbank gene 3558 3885 . + . ID=gene-C9F07_34520;Name=C9F07_34520;end_range=3885,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34520;partial=true PYKI01003433.1 Protein Homology CDS 3558 3885 . + 0 ID=cds-TGD33518.1;Parent=gene-C9F07_34520;Dbxref=NCBI_GP:TGD33518.1;Name=TGD33518.1;end_range=3885,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=C9F07_34520;partial=true;product=hypothetical protein;protein_id=TGD33518.1;transl_table=11 ##sequence-region PYKI01002354.1 1 1138 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002354.1 Genbank region 1 1138 . + . ID=PYKI01002354.1:1..1138;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002354.1 Genbank gene 1 1138 . + . ID=gene-C9F07_23130;Name=C9F07_23130;end_range=1138,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23130;partial=true;start_range=.,1 PYKI01002354.1 Protein Homology CDS 1 1138 . + 1 ID=cds-TGD53186.1;Parent=gene-C9F07_23130;Dbxref=NCBI_GP:TGD53186.1;Name=TGD53186.1;end_range=1138,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=C9F07_23130;partial=true;product=diol dehydratase reactivase subunit alpha;protein_id=TGD53186.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000432.1 1 1135 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000432.1 Genbank region 1 1135 . + . ID=PYKI01000432.1:1..1135;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000432.1 Genbank pseudogene 144 1135 . - . ID=gene-C9F07_03330;Name=secD;gbkey=Gene;gene=secD;gene_biotype=pseudogene;locus_tag=C9F07_03330;pseudo=true PYKI01000432.1 Protein Homology CDS 144 1135 . - 2 ID=cds-C9F07_03330;Parent=gene-C9F07_03330;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=secD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=C9F07_03330;product=protein translocase subunit SecD;pseudo=true;transl_table=11 ##sequence-region PYKI01003006.1 1 1133 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003006.1 Genbank region 1 1133 . + . ID=PYKI01003006.1:1..1133;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003006.1 Genbank gene 1 643 . - . ID=gene-C9F07_30125;Name=C9F07_30125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30125;partial=true;start_range=.,1 PYKI01003006.1 Protein Homology CDS 1 643 . - 0 ID=cds-TGD41213.1;Parent=gene-C9F07_30125;Dbxref=NCBI_GP:TGD41213.1;Name=TGD41213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455691.1;locus_tag=C9F07_30125;partial=true;product=aminodeoxychorismate lyase;protein_id=TGD41213.1;start_range=.,1;transl_table=11 PYKI01003006.1 Genbank gene 1058 1133 . + . ID=gene-C9F07_30130;Name=C9F07_30130;end_range=1133,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30130;partial=true PYKI01003006.1 Protein Homology CDS 1058 1133 . + 0 ID=cds-TGD41214.1;Parent=gene-C9F07_30130;Dbxref=NCBI_GP:TGD41214.1;Name=TGD41214.1;end_range=1133,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405985.1;locus_tag=C9F07_30130;partial=true;product=fimbrial protein;protein_id=TGD41214.1;transl_table=11 ##sequence-region PYKI01003402.1 1 1099 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003402.1 Genbank region 1 1099 . + . ID=PYKI01003402.1:1..1099;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003402.1 Genbank gene 1 378 . + . ID=gene-C9F07_34195;Name=C9F07_34195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34195;partial=true;start_range=.,1 PYKI01003402.1 Protein Homology CDS 1 378 . + 0 ID=cds-TGD33919.1;Parent=gene-C9F07_34195;Dbxref=NCBI_GP:TGD33919.1;Name=TGD33919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308213.1;locus_tag=C9F07_34195;partial=true;product=hypothetical protein;protein_id=TGD33919.1;start_range=.,1;transl_table=11 PYKI01003402.1 Genbank pseudogene 391 1062 . + . ID=gene-C9F07_34200;Name=C9F07_34200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34200;pseudo=true PYKI01003402.1 Protein Homology CDS 391 1062 . + 0 ID=cds-C9F07_34200;Parent=gene-C9F07_34200;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=C9F07_34200;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKI01002207.1 1 1132 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002207.1 Genbank region 1 1132 . + . ID=PYKI01002207.1:1..1132;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002207.1 Genbank gene 1 342 . - . ID=gene-C9F07_21475;Name=C9F07_21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21475;partial=true;start_range=.,1 PYKI01002207.1 Protein Homology CDS 1 342 . - 0 ID=cds-TGD56510.1;Parent=gene-C9F07_21475;Dbxref=NCBI_GP:TGD56510.1;Name=TGD56510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=C9F07_21475;partial=true;product=MFS transporter;protein_id=TGD56510.1;start_range=.,1;transl_table=11 PYKI01002207.1 Genbank gene 369 1132 . - . ID=gene-C9F07_21480;Name=C9F07_21480;end_range=1132,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21480;partial=true PYKI01002207.1 Protein Homology CDS 369 1132 . - 2 ID=cds-TGD56511.1;Parent=gene-C9F07_21480;Dbxref=NCBI_GP:TGD56511.1;Name=TGD56511.1;end_range=1132,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=C9F07_21480;partial=true;product=alcohol dehydrogenase;protein_id=TGD56511.1;transl_table=11 ##sequence-region PYKI01002766.1 1 1131 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002766.1 Genbank region 1 1131 . + . ID=PYKI01002766.1:1..1131;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002766.1 Genbank gene 1 145 . + . ID=gene-C9F07_27635;Name=C9F07_27635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27635;partial=true;start_range=.,1 PYKI01002766.1 Protein Homology CDS 1 145 . + 1 ID=cds-TGD46526.1;Parent=gene-C9F07_27635;Dbxref=NCBI_GP:TGD46526.1;Name=TGD46526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455820.1;locus_tag=C9F07_27635;partial=true;product=transcriptional regulator;protein_id=TGD46526.1;start_range=.,1;transl_table=11 PYKI01002766.1 Genbank gene 234 740 . - . ID=gene-C9F07_27640;Name=C9F07_27640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27640 PYKI01002766.1 Protein Homology CDS 234 740 . - 0 ID=cds-TGD46527.1;Parent=gene-C9F07_27640;Dbxref=NCBI_GP:TGD46527.1;Name=TGD46527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=C9F07_27640;product=2-Cys peroxiredoxin;protein_id=TGD46527.1;transl_table=11 PYKI01002766.1 Genbank gene 856 1131 . + . ID=gene-C9F07_27645;Name=C9F07_27645;end_range=1131,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27645;partial=true PYKI01002766.1 Protein Homology CDS 856 1131 . + 0 ID=cds-TGD46528.1;Parent=gene-C9F07_27645;Dbxref=NCBI_GP:TGD46528.1;Name=TGD46528.1;Note=catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate;end_range=1131,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455823.1;locus_tag=C9F07_27645;partial=true;product=L-Ala-D/L-Glu epimerase;protein_id=TGD46528.1;transl_table=11 ##sequence-region PYKI01001608.1 1 1131 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001608.1 Genbank region 1 1131 . + . ID=PYKI01001608.1:1..1131;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001608.1 Genbank pseudogene 1 699 . + . ID=gene-C9F07_15335;Name=C9F07_15335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15335;pseudo=true PYKI01001608.1 Protein Homology CDS 1 699 . + 0 ID=cds-C9F07_15335;Parent=gene-C9F07_15335;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458145.1;locus_tag=C9F07_15335;product=L-fucose:H+ symporter permease;pseudo=true;transl_table=11 PYKI01001608.1 Genbank gene 711 1131 . + . ID=gene-C9F07_15340;Name=C9F07_15340;end_range=1131,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15340;partial=true PYKI01001608.1 Protein Homology CDS 711 1131 . + 0 ID=cds-TGD71138.1;Parent=gene-C9F07_15340;Dbxref=NCBI_GP:TGD71138.1;Name=TGD71138.1;end_range=1131,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=C9F07_15340;partial=true;product=DUF4432 domain-containing protein;protein_id=TGD71138.1;transl_table=11 ##sequence-region PYKI01001173.1 1 1130 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001173.1 Genbank region 1 1130 . + . ID=PYKI01001173.1:1..1130;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001173.1 Genbank gene 1 404 . - . ID=gene-C9F07_10955;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=C9F07_10955;partial=true;start_range=.,1 PYKI01001173.1 Protein Homology CDS 1 404 . - 0 ID=cds-TGD92761.1;Parent=gene-C9F07_10955;Dbxref=NCBI_GP:TGD92761.1;Name=TGD92761.1;gbkey=CDS;gene=cydB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=C9F07_10955;partial=true;product=cytochrome d ubiquinol oxidase subunit II;protein_id=TGD92761.1;start_range=.,1;transl_table=11 PYKI01001173.1 Genbank gene 416 1130 . - . ID=gene-C9F07_10960;Name=C9F07_10960;end_range=1130,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10960;partial=true PYKI01001173.1 Protein Homology CDS 416 1130 . - 1 ID=cds-TGD92760.1;Parent=gene-C9F07_10960;Dbxref=NCBI_GP:TGD92760.1;Name=TGD92760.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;end_range=1130,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456301.1;locus_tag=C9F07_10960;partial=true;product=cytochrome d terminal oxidase subunit 1;protein_id=TGD92760.1;transl_table=11 ##sequence-region PYKI01002856.1 1 3876 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002856.1 Genbank region 1 3876 . + . ID=PYKI01002856.1:1..3876;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002856.1 Genbank gene 134 1849 . + . ID=gene-C9F07_28580;Name=C9F07_28580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28580 PYKI01002856.1 Protein Homology CDS 134 1849 . + 0 ID=cds-TGD44997.1;Parent=gene-C9F07_28580;Dbxref=NCBI_GP:TGD44997.1;Name=TGD44997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=C9F07_28580;product=arylsulfatase;protein_id=TGD44997.1;transl_table=11 PYKI01002856.1 Genbank gene 2012 3178 . + . ID=gene-C9F07_28585;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=C9F07_28585 PYKI01002856.1 Protein Homology CDS 2012 3178 . + 0 ID=cds-TGD44998.1;Parent=gene-C9F07_28585;Dbxref=NCBI_GP:TGD44998.1;Name=TGD44998.1;gbkey=CDS;gene=nhaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=C9F07_28585;product=Na+/H+ antiporter NhaA;protein_id=TGD44998.1;transl_table=11 PYKI01002856.1 Genbank gene 3240 3876 . + . ID=gene-C9F07_28590;Name=C9F07_28590;end_range=3876,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28590;partial=true PYKI01002856.1 Protein Homology CDS 3240 3876 . + 0 ID=cds-TGD44999.1;Parent=gene-C9F07_28590;Dbxref=NCBI_GP:TGD44999.1;Name=TGD44999.1;end_range=3876,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454651.1;locus_tag=C9F07_28590;partial=true;product=transcriptional activator NhaR;protein_id=TGD44999.1;transl_table=11 ##sequence-region PYKI01002653.1 1 1130 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002653.1 Genbank region 1 1130 . + . ID=PYKI01002653.1:1..1130;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002653.1 Genbank gene 1 925 . - . ID=gene-C9F07_26410;Name=C9F07_26410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26410;partial=true;start_range=.,1 PYKI01002653.1 Protein Homology CDS 1 925 . - 0 ID=cds-TGD49360.1;Parent=gene-C9F07_26410;Dbxref=NCBI_GP:TGD49360.1;Name=TGD49360.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=C9F07_26410;partial=true;product=cytochrome d terminal oxidase subunit 1;protein_id=TGD49360.1;start_range=.,1;transl_table=11 PYKI01002653.1 Genbank gene 1000 1130 . - . ID=gene-C9F07_26415;Name=C9F07_26415;end_range=1130,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26415;partial=true PYKI01002653.1 Protein Homology CDS 1000 1130 . - 2 ID=cds-TGD49361.1;Parent=gene-C9F07_26415;Dbxref=NCBI_GP:TGD49361.1;Name=TGD49361.1;end_range=1130,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456300.1;locus_tag=C9F07_26415;partial=true;product=hydrogenase expression/formation protein;protein_id=TGD49361.1;transl_table=11 ##sequence-region PYKI01001018.1 1 1129 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001018.1 Genbank region 1 1129 . + . ID=PYKI01001018.1:1..1129;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001018.1 Genbank gene 1 530 . - . ID=gene-C9F07_09350;Name=C9F07_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09350;partial=true;start_range=.,1 PYKI01001018.1 Protein Homology CDS 1 530 . - 0 ID=cds-TGD97547.1;Parent=gene-C9F07_09350;Dbxref=NCBI_GP:TGD97547.1;Name=TGD97547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455739.1;locus_tag=C9F07_09350;partial=true;product=hypothetical protein;protein_id=TGD97547.1;start_range=.,1;transl_table=11 PYKI01001018.1 Genbank gene 918 1129 . - . ID=gene-C9F07_09355;Name=C9F07_09355;end_range=1129,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09355;partial=true PYKI01001018.1 Protein Homology CDS 918 1129 . - 2 ID=cds-TGD97548.1;Parent=gene-C9F07_09355;Dbxref=NCBI_GP:TGD97548.1;Name=TGD97548.1;end_range=1129,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455738.1;locus_tag=C9F07_09355;partial=true;product=hypothetical protein;protein_id=TGD97548.1;transl_table=11 ##sequence-region PYKI01000280.1 1 1129 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000280.1 Genbank region 1 1129 . + . ID=PYKI01000280.1:1..1129;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000280.1 Genbank gene 1 453 . + . ID=gene-C9F07_01820;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=C9F07_01820;partial=true;start_range=.,1 PYKI01000280.1 Protein Homology CDS 1 453 . + 0 ID=cds-TGE27827.1;Parent=gene-C9F07_01820;Dbxref=NCBI_GP:TGE27827.1;Name=TGE27827.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=C9F07_01820;partial=true;product=succinate dehydrogenase iron-sulfur subunit;protein_id=TGE27827.1;start_range=.,1;transl_table=11 PYKI01000280.1 Genbank gene 979 1129 . + . ID=gene-C9F07_01825;Name=C9F07_01825;end_range=1129,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01825;partial=true PYKI01000280.1 Protein Homology CDS 979 1129 . + 0 ID=cds-TGE27828.1;Parent=gene-C9F07_01825;Dbxref=NCBI_GP:TGE27828.1;Name=TGE27828.1;end_range=1129,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455292.1;locus_tag=C9F07_01825;partial=true;product=2-oxoglutarate dehydrogenase;protein_id=TGE27828.1;transl_table=11 ##sequence-region PYKI01002035.1 1 1129 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002035.1 Genbank region 1 1129 . + . ID=PYKI01002035.1:1..1129;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002035.1 Genbank gene 1 212 . - . ID=gene-C9F07_19645;Name=C9F07_19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19645;partial=true;start_range=.,1 PYKI01002035.1 Protein Homology CDS 1 212 . - 0 ID=cds-TGD60017.1;Parent=gene-C9F07_19645;Dbxref=NCBI_GP:TGD60017.1;Name=TGD60017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=C9F07_19645;partial=true;product=reverse transcriptase;protein_id=TGD60017.1;start_range=.,1;transl_table=11 PYKI01002035.1 Genbank gene 116 382 . + . ID=gene-C9F07_19650;Name=C9F07_19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19650 PYKI01002035.1 Protein Homology CDS 116 382 . + 0 ID=cds-TGD60015.1;Parent=gene-C9F07_19650;Dbxref=NCBI_GP:TGD60015.1;Name=TGD60015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455855.4;locus_tag=C9F07_19650;product=DUF333 domain-containing protein;protein_id=TGD60015.1;transl_table=11 PYKI01002035.1 Genbank gene 426 836 . - . ID=gene-C9F07_19655;Name=C9F07_19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19655 PYKI01002035.1 Protein Homology CDS 426 836 . - 0 ID=cds-TGD60016.1;Parent=gene-C9F07_19655;Dbxref=NCBI_GP:TGD60016.1;Name=TGD60016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455856.1;locus_tag=C9F07_19655;product=heat-inducible protein;protein_id=TGD60016.1;transl_table=11 ##sequence-region PYKI01003464.1 1 1128 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003464.1 Genbank region 1 1128 . + . ID=PYKI01003464.1:1..1128;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003464.1 Genbank gene 1 739 . + . ID=gene-C9F07_34825;Name=C9F07_34825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34825;partial=true;start_range=.,1 PYKI01003464.1 Protein Homology CDS 1 739 . + 1 ID=cds-TGD32919.1;Parent=gene-C9F07_34825;Dbxref=NCBI_GP:TGD32919.1;Name=TGD32919.1;Note=Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose ph;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=C9F07_34825;partial=true;product=two-component system sensor histidine kinase UhpB;protein_id=TGD32919.1;start_range=.,1;transl_table=11 PYKI01003464.1 Genbank gene 749 1128 . + . ID=gene-C9F07_34830;Name=C9F07_34830;end_range=1128,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34830;partial=true PYKI01003464.1 Protein Homology CDS 749 1128 . + 0 ID=cds-TGD32920.1;Parent=gene-C9F07_34830;Dbxref=NCBI_GP:TGD32920.1;Name=TGD32920.1;end_range=1128,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=C9F07_34830;partial=true;product=MFS transporter family glucose-6-phosphate receptor UhpC;protein_id=TGD32920.1;transl_table=11 ##sequence-region PYKI01001544.1 1 1127 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001544.1 Genbank region 1 1127 . + . ID=PYKI01001544.1:1..1127;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001544.1 Genbank gene 1 413 . - . ID=gene-C9F07_14755;Name=C9F07_14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14755;partial=true;start_range=.,1 PYKI01001544.1 Protein Homology CDS 1 413 . - 0 ID=cds-TGD75057.1;Parent=gene-C9F07_14755;Dbxref=NCBI_GP:TGD75057.1;Name=TGD75057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458568.1;locus_tag=C9F07_14755;partial=true;product=LysR family transcriptional regulator;protein_id=TGD75057.1;start_range=.,1;transl_table=11 PYKI01001544.1 Genbank gene 517 927 . + . ID=gene-C9F07_14760;Name=C9F07_14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14760 PYKI01001544.1 Protein Homology CDS 517 927 . + 0 ID=cds-TGD75059.1;Parent=gene-C9F07_14760;Dbxref=NCBI_GP:TGD75059.1;Name=TGD75059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458569.1;locus_tag=C9F07_14760;product=CidA/LrgA family protein;protein_id=TGD75059.1;transl_table=11 PYKI01001544.1 Genbank gene 920 1127 . + . ID=gene-C9F07_14765;Name=C9F07_14765;end_range=1127,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14765;partial=true PYKI01001544.1 Protein Homology CDS 920 1127 . + 0 ID=cds-TGD75058.1;Parent=gene-C9F07_14765;Dbxref=NCBI_GP:TGD75058.1;Name=TGD75058.1;end_range=1127,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=C9F07_14765;partial=true;product=murein hydrolase effector protein LrgB;protein_id=TGD75058.1;transl_table=11 ##sequence-region PYKI01002713.1 1 1127 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002713.1 Genbank region 1 1127 . + . ID=PYKI01002713.1:1..1127;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002713.1 Genbank gene 19 429 . + . ID=gene-C9F07_27050;Name=C9F07_27050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27050 PYKI01002713.1 Protein Homology CDS 19 429 . + 0 ID=cds-TGD47860.1;Parent=gene-C9F07_27050;Dbxref=NCBI_GP:TGD47860.1;Name=TGD47860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001745218.1;locus_tag=C9F07_27050;product=transketolase;protein_id=TGD47860.1;transl_table=11 PYKI01002713.1 Genbank gene 492 722 . - . ID=gene-C9F07_27055;Name=C9F07_27055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27055 PYKI01002713.1 Protein Homology CDS 492 722 . - 0 ID=cds-TGD47859.1;Parent=gene-C9F07_27055;Dbxref=NCBI_GP:TGD47859.1;Name=TGD47859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=C9F07_27055;product=hypothetical protein;protein_id=TGD47859.1;transl_table=11 PYKI01002713.1 Genbank pseudogene 851 1030 . - . ID=gene-C9F07_27060;Name=C9F07_27060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27060;pseudo=true PYKI01002713.1 Protein Homology CDS 851 1030 . - 0 ID=cds-C9F07_27060;Parent=gene-C9F07_27060;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457010.1;locus_tag=C9F07_27060;product=DUF1176 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002847.1 1 1126 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002847.1 Genbank region 1 1126 . + . ID=PYKI01002847.1:1..1126;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002847.1 Genbank gene 117 857 . + . ID=gene-C9F07_28460;Name=C9F07_28460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28460 PYKI01002847.1 Protein Homology CDS 117 857 . + 0 ID=cds-TGD45549.1;Parent=gene-C9F07_28460;Dbxref=NCBI_GP:TGD45549.1;Name=TGD45549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=C9F07_28460;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=TGD45549.1;transl_table=11 PYKI01002847.1 Genbank pseudogene 894 1085 . + . ID=gene-C9F07_28465;Name=C9F07_28465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28465;pseudo=true PYKI01002847.1 Protein Homology CDS 894 1085 . + 0 ID=cds-C9F07_28465;Parent=gene-C9F07_28465;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456465.1;locus_tag=C9F07_28465;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003538.1 1 1126 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003538.1 Genbank region 1 1126 . + . ID=PYKI01003538.1:1..1126;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003538.1 Genbank pseudogene 1 1126 . + . ID=gene-C9F07_35720;Name=C9F07_35720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35720;pseudo=true PYKI01003538.1 Protein Homology CDS 1 1126 . + 2 ID=cds-C9F07_35720;Parent=gene-C9F07_35720;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395336.1;locus_tag=C9F07_35720;product=type III restriction endonuclease subunit R;pseudo=true;transl_table=11 ##sequence-region PYKI01002800.1 1 3871 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002800.1 Genbank region 1 3871 . + . ID=PYKI01002800.1:1..3871;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002800.1 Genbank pseudogene 77 715 . - . ID=gene-C9F07_27995;Name=C9F07_27995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27995;pseudo=true PYKI01002800.1 Protein Homology CDS 77 715 . - 0 ID=cds-C9F07_27995;Parent=gene-C9F07_27995;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456546.1;locus_tag=C9F07_27995;product=mannosyl-3-phosphoglycerate phosphatase-related protein;pseudo=true;transl_table=11 PYKI01002800.1 Genbank gene 1025 1252 . - . ID=gene-C9F07_28000;Name=C9F07_28000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28000 PYKI01002800.1 Protein Homology CDS 1025 1252 . - 0 ID=cds-TGD45884.1;Parent=gene-C9F07_28000;Dbxref=NCBI_GP:TGD45884.1;Name=TGD45884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456545.1;locus_tag=C9F07_28000;product=DUF2525 domain-containing protein;protein_id=TGD45884.1;transl_table=11 PYKI01002800.1 Genbank gene 1327 1575 . + . ID=gene-C9F07_28005;Name=C9F07_28005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28005 PYKI01002800.1 Protein Homology CDS 1327 1575 . + 0 ID=cds-TGD45885.1;Parent=gene-C9F07_28005;Dbxref=NCBI_GP:TGD45885.1;Name=TGD45885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005105543.1;locus_tag=C9F07_28005;product=DsrB protein;protein_id=TGD45885.1;transl_table=11 PYKI01002800.1 Genbank gene 1614 2237 . - . ID=gene-C9F07_28010;Name=C9F07_28010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28010 PYKI01002800.1 Protein Homology CDS 1614 2237 . - 0 ID=cds-TGD45886.1;Parent=gene-C9F07_28010;Dbxref=NCBI_GP:TGD45886.1;Name=TGD45886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=C9F07_28010;product=helix-turn-helix transcriptional regulator;protein_id=TGD45886.1;transl_table=11 PYKI01002800.1 Genbank gene 2519 3313 . - . ID=gene-C9F07_28015;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=C9F07_28015 PYKI01002800.1 Protein Homology CDS 2519 3313 . - 0 ID=cds-TGD45887.1;Parent=gene-C9F07_28015;Dbxref=NCBI_GP:TGD45887.1;Name=TGD45887.1;Note=FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=C9F07_28015;product=flagellar biosynthesis protein FliR;protein_id=TGD45887.1;transl_table=11 PYKI01002800.1 Genbank gene 3322 3591 . - . ID=gene-C9F07_28020;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=C9F07_28020 PYKI01002800.1 Protein Homology CDS 3322 3591 . - 0 ID=cds-TGD45888.1;Parent=gene-C9F07_28020;Dbxref=NCBI_GP:TGD45888.1;Name=TGD45888.1;gbkey=CDS;gene=fliQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=C9F07_28020;product=flagellar biosynthetic protein FliQ;protein_id=TGD45888.1;transl_table=11 PYKI01002800.1 Genbank gene 3601 3871 . - . ID=gene-C9F07_28025;Name=fliP;end_range=3871,.;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=C9F07_28025;partial=true PYKI01002800.1 Protein Homology CDS 3601 3871 . - 1 ID=cds-TGD45889.1;Parent=gene-C9F07_28025;Dbxref=NCBI_GP:TGD45889.1;Name=TGD45889.1;end_range=3871,.;gbkey=CDS;gene=fliP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127763.1;locus_tag=C9F07_28025;partial=true;product=flagellar type III secretion system protein FliP;protein_id=TGD45889.1;transl_table=11 ##sequence-region PYKI01003564.1 1 1126 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003564.1 Genbank region 1 1126 . + . ID=PYKI01003564.1:1..1126;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003564.1 Genbank gene 1 1126 . - . ID=gene-C9F07_35985;Name=C9F07_35985;end_range=1126,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35985;partial=true;start_range=.,1 PYKI01003564.1 Protein Homology CDS 1 1126 . - 2 ID=cds-TGD30466.1;Parent=gene-C9F07_35985;Dbxref=NCBI_GP:TGD30466.1;Name=TGD30466.1;end_range=1126,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001588220.1;locus_tag=C9F07_35985;partial=true;product=GTP-binding protein;protein_id=TGD30466.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001241.1 1 1126 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001241.1 Genbank region 1 1126 . + . ID=PYKI01001241.1:1..1126;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001241.1 Genbank gene 1 1126 . - . ID=gene-C9F07_11580;Name=C9F07_11580;end_range=1126,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11580;partial=true;start_range=.,1 PYKI01001241.1 Protein Homology CDS 1 1126 . - 2 ID=cds-TGD90294.1;Parent=gene-C9F07_11580;Dbxref=NCBI_GP:TGD90294.1;Name=TGD90294.1;end_range=1126,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461448.1;locus_tag=C9F07_11580;partial=true;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=TGD90294.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002654.1 1 1125 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002654.1 Genbank region 1 1125 . + . ID=PYKI01002654.1:1..1125;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002654.1 Genbank gene 141 671 . - . ID=gene-C9F07_26420;Name=C9F07_26420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26420 PYKI01002654.1 Protein Homology CDS 141 671 . - 0 ID=cds-TGD49352.1;Parent=gene-C9F07_26420;Dbxref=NCBI_GP:TGD49352.1;Name=TGD49352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=C9F07_26420;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=TGD49352.1;transl_table=11 ##sequence-region PYKI01001025.1 1 1125 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001025.1 Genbank region 1 1125 . + . ID=PYKI01001025.1:1..1125;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001025.1 Genbank pseudogene 70 345 . - . ID=gene-C9F07_09440;Name=torD;gbkey=Gene;gene=torD;gene_biotype=pseudogene;locus_tag=C9F07_09440;pseudo=true PYKI01001025.1 Protein Homology CDS 70 345 . - 0 ID=cds-C9F07_09440;Parent=gene-C9F07_09440;Note=TorD%3B involved in the biogenesis of torA%3B acts on torA before the insertion of the molybdenum cofactor and%2C as a result%2C probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=torD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458118.1;locus_tag=C9F07_09440;product=molecular chaperone TorD;pseudo=true;transl_table=11 PYKI01001025.1 Genbank gene 338 1125 . - . ID=gene-C9F07_09445;Name=C9F07_09445;end_range=1125,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09445;partial=true PYKI01001025.1 Protein Homology CDS 338 1125 . - 2 ID=cds-TGD97308.1;Parent=gene-C9F07_09445;Dbxref=NCBI_GP:TGD97308.1;Name=TGD97308.1;Note=catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine;end_range=1125,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=C9F07_09445;partial=true;product=trimethylamine-N-oxide reductase TorA;protein_id=TGD97308.1;transl_table=11 ##sequence-region PYKI01002875.1 1 1125 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002875.1 Genbank region 1 1125 . + . ID=PYKI01002875.1:1..1125;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002875.1 Genbank gene 92 496 . - . ID=gene-C9F07_28800;Name=C9F07_28800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28800 PYKI01002875.1 Protein Homology CDS 92 496 . - 0 ID=cds-TGD44487.1;Parent=gene-C9F07_28800;Dbxref=NCBI_GP:TGD44487.1;Name=TGD44487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454621.1;locus_tag=C9F07_28800;product=hypothetical protein;protein_id=TGD44487.1;transl_table=11 PYKI01002875.1 Genbank gene 845 1125 . + . ID=gene-C9F07_28805;Name=dnaK;end_range=1125,.;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=C9F07_28805;partial=true PYKI01002875.1 Protein Homology CDS 845 1125 . + 0 ID=cds-TGD44488.1;Parent=gene-C9F07_28805;Dbxref=NCBI_GP:TGD44488.1;Name=TGD44488.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;end_range=1125,.;gbkey=CDS;gene=dnaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=C9F07_28805;partial=true;product=molecular chaperone DnaK;protein_id=TGD44488.1;transl_table=11 ##sequence-region PYKI01001002.1 1 1122 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001002.1 Genbank region 1 1122 . + . ID=PYKI01001002.1:1..1122;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001002.1 Genbank gene 1 464 . + . ID=gene-C9F07_09180;Name=C9F07_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09180;partial=true;start_range=.,1 PYKI01001002.1 Protein Homology CDS 1 464 . + 2 ID=cds-TGD98483.1;Parent=gene-C9F07_09180;Dbxref=NCBI_GP:TGD98483.1;Name=TGD98483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456781.1;locus_tag=C9F07_09180;partial=true;product=ATP-dependent helicase;protein_id=TGD98483.1;start_range=.,1;transl_table=11 PYKI01001002.1 Genbank gene 589 873 . + . ID=gene-C9F07_09185;Name=C9F07_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09185 PYKI01001002.1 Protein Homology CDS 589 873 . + 0 ID=cds-TGD98484.1;Parent=gene-C9F07_09185;Dbxref=NCBI_GP:TGD98484.1;Name=TGD98484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=C9F07_09185;product=50S ribosomal protein L25;protein_id=TGD98484.1;transl_table=11 PYKI01001002.1 Genbank gene 994 1122 . - . ID=gene-C9F07_09190;Name=C9F07_09190;end_range=1122,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09190;partial=true PYKI01001002.1 Protein Homology CDS 994 1122 . - 0 ID=cds-TGD98485.1;Parent=gene-C9F07_09190;Dbxref=NCBI_GP:TGD98485.1;Name=TGD98485.1;end_range=1122,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456784.1;locus_tag=C9F07_09190;partial=true;product=nucleoid-associated protein YejK;protein_id=TGD98485.1;transl_table=11 ##sequence-region PYKI01000337.1 1 1095 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000337.1 Genbank region 1 1095 . + . ID=PYKI01000337.1:1..1095;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000337.1 Genbank pseudogene 1 1047 . - . ID=gene-C9F07_02445;Name=C9F07_02445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02445;pseudo=true PYKI01000337.1 Protein Homology CDS 1 1047 . - 0 ID=cds-C9F07_02445;Parent=gene-C9F07_02445;Note=with YejAEF is involved in resistance to microcin C%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456776.1;locus_tag=C9F07_02445;product=microcin ABC transporter ATP-binding protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002470.1 1 1121 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002470.1 Genbank region 1 1121 . + . ID=PYKI01002470.1:1..1121;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002470.1 Genbank gene 1 521 . + . ID=gene-C9F07_24405;Name=C9F07_24405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24405;partial=true;start_range=.,1 PYKI01002470.1 Protein Homology CDS 1 521 . + 2 ID=cds-TGD50608.1;Parent=gene-C9F07_24405;Dbxref=NCBI_GP:TGD50608.1;Name=TGD50608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456089.1;locus_tag=C9F07_24405;partial=true;product=fusaric acid resistance protein;protein_id=TGD50608.1;start_range=.,1;transl_table=11 PYKI01002470.1 Genbank gene 497 1018 . - . ID=gene-C9F07_24410;Name=C9F07_24410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24410 PYKI01002470.1 Protein Homology CDS 497 1018 . - 0 ID=cds-TGD50609.1;Parent=gene-C9F07_24410;Dbxref=NCBI_GP:TGD50609.1;Name=TGD50609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=C9F07_24410;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=TGD50609.1;transl_table=11 ##sequence-region PYKI01002325.1 1 1121 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002325.1 Genbank region 1 1121 . + . ID=PYKI01002325.1:1..1121;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002325.1 Genbank gene 1 1101 . - . ID=gene-C9F07_22800;Name=C9F07_22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22800;partial=true;start_range=.,1 PYKI01002325.1 Protein Homology CDS 1 1101 . - 0 ID=cds-TGD53973.1;Parent=gene-C9F07_22800;Dbxref=NCBI_GP:TGD53973.1;Name=TGD53973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670979.1;locus_tag=C9F07_22800;partial=true;product=glycogen synthase GlgA;protein_id=TGD53973.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001348.1 1 3869 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001348.1 Genbank region 1 3869 . + . ID=PYKI01001348.1:1..3869;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001348.1 Genbank pseudogene 62 829 . - . ID=gene-C9F07_12640;Name=C9F07_12640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12640;pseudo=true PYKI01001348.1 Protein Homology CDS 62 829 . - 0 ID=cds-C9F07_12640;Parent=gene-C9F07_12640;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458412.1;locus_tag=C9F07_12640;product=DNA utilization protein HofM;pseudo=true;transl_table=11 PYKI01001348.1 Genbank gene 926 3502 . + . ID=gene-C9F07_12645;Name=C9F07_12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12645 PYKI01001348.1 Protein Homology CDS 926 3502 . + 0 ID=cds-TGD85255.1;Parent=gene-C9F07_12645;Dbxref=NCBI_GP:TGD85255.1;Name=TGD85255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462396.3;locus_tag=C9F07_12645;product=carboxypeptidase/penicillin-binding protein 1A;protein_id=TGD85255.1;transl_table=11 PYKI01001348.1 Genbank gene 3598 3869 . - . ID=gene-C9F07_12650;Name=nudE;end_range=3869,.;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=C9F07_12650;partial=true PYKI01001348.1 Protein Homology CDS 3598 3869 . - 2 ID=cds-TGD85256.1;Parent=gene-C9F07_12650;Dbxref=NCBI_GP:TGD85256.1;Name=TGD85256.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;end_range=3869,.;gbkey=CDS;gene=nudE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458410.3;locus_tag=C9F07_12650;partial=true;product=ADP compounds hydrolase NudE;protein_id=TGD85256.1;transl_table=11 ##sequence-region PYKI01002014.1 1 1120 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002014.1 Genbank region 1 1120 . + . ID=PYKI01002014.1:1..1120;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002014.1 Genbank gene 1 228 . + . ID=gene-C9F07_19415;Name=C9F07_19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19415;partial=true;start_range=.,1 PYKI01002014.1 Protein Homology CDS 1 228 . + 0 ID=cds-TGD60097.1;Parent=gene-C9F07_19415;Dbxref=NCBI_GP:TGD60097.1;Name=TGD60097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455095.1;locus_tag=C9F07_19415;partial=true;product=NfeD family protein;protein_id=TGD60097.1;start_range=.,1;transl_table=11 PYKI01002014.1 Genbank gene 229 645 . - . ID=gene-C9F07_19420;Name=C9F07_19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19420 PYKI01002014.1 Protein Homology CDS 229 645 . - 0 ID=cds-TGD60098.1;Parent=gene-C9F07_19420;Dbxref=NCBI_GP:TGD60098.1;Name=TGD60098.1;Note=activator of copper-responsive regulon genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=C9F07_19420;product=heavy metal-responsive transcriptional regulator;protein_id=TGD60098.1;transl_table=11 PYKI01002014.1 Genbank gene 755 1120 . + . ID=gene-C9F07_19425;Name=C9F07_19425;end_range=1120,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19425;partial=true PYKI01002014.1 Protein Homology CDS 755 1120 . + 0 ID=cds-TGD60099.1;Parent=gene-C9F07_19425;Dbxref=NCBI_GP:TGD60099.1;Name=TGD60099.1;end_range=1120,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455093.1;locus_tag=C9F07_19425;partial=true;product=hypothetical protein;protein_id=TGD60099.1;transl_table=11 ##sequence-region PYKI01000787.1 1 1120 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000787.1 Genbank region 1 1120 . + . ID=PYKI01000787.1:1..1120;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000787.1 Genbank gene 73 954 . - . ID=gene-C9F07_07095;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=C9F07_07095 PYKI01000787.1 Protein Homology CDS 73 954 . - 0 ID=cds-TGE09160.1;Parent=gene-C9F07_07095;Dbxref=NCBI_GP:TGE09160.1;Name=TGE09160.1;gbkey=CDS;gene=rfbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=C9F07_07095;product=glucose-1-phosphate thymidylyltransferase;protein_id=TGE09160.1;transl_table=11 ##sequence-region PYKI01001703.1 1 1120 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001703.1 Genbank region 1 1120 . + . ID=PYKI01001703.1:1..1120;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001703.1 Genbank gene 1 703 . - . ID=gene-C9F07_16240;Name=C9F07_16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16240;partial=true;start_range=.,1 PYKI01001703.1 Protein Homology CDS 1 703 . - 0 ID=cds-TGD69385.1;Parent=gene-C9F07_16240;Dbxref=NCBI_GP:TGD69385.1;Name=TGD69385.1;Note=involved in the transport of lipid A across the inner membrane;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455471.1;locus_tag=C9F07_16240;partial=true;product=lipid ABC transporter permease/ATP-binding protein;protein_id=TGD69385.1;start_range=.,1;transl_table=11 PYKI01001703.1 Genbank gene 740 1120 . - . ID=gene-C9F07_16245;Name=C9F07_16245;end_range=1120,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16245;partial=true PYKI01001703.1 Protein Homology CDS 740 1120 . - 0 ID=cds-TGD69386.1;Parent=gene-C9F07_16245;Dbxref=NCBI_GP:TGD69386.1;Name=TGD69386.1;end_range=1120,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455470.1;locus_tag=C9F07_16245;partial=true;product=ComEC family protein;protein_id=TGD69386.1;transl_table=11 ##sequence-region PYKI01002751.1 1 1119 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002751.1 Genbank region 1 1119 . + . ID=PYKI01002751.1:1..1119;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002751.1 Genbank pseudogene 102 1119 . - . ID=gene-C9F07_27470;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=pseudogene;locus_tag=C9F07_27470;pseudo=true PYKI01002751.1 Protein Homology CDS 102 1119 . - 1 ID=cds-C9F07_27470;Parent=gene-C9F07_27470;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=pepN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=C9F07_27470;product=aminopeptidase N;pseudo=true;transl_table=11 ##sequence-region PYKI01000756.1 1 1119 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000756.1 Genbank region 1 1119 . + . ID=PYKI01000756.1:1..1119;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000756.1 Genbank gene 1 1066 . + . ID=gene-C9F07_06675;Name=C9F07_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06675;partial=true;start_range=.,1 PYKI01000756.1 Protein Homology CDS 1 1066 . + 1 ID=cds-TGE10668.1;Parent=gene-C9F07_06675;Dbxref=NCBI_GP:TGE10668.1;Name=TGE10668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=C9F07_06675;partial=true;product=50S ribosomal protein L16 arginine hydroxylase;protein_id=TGE10668.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003309.1 1 1119 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003309.1 Genbank region 1 1119 . + . ID=PYKI01003309.1:1..1119;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003309.1 Genbank gene 1 693 . + . ID=gene-C9F07_33290;Name=C9F07_33290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33290;partial=true;start_range=.,1 PYKI01003309.1 Protein Homology CDS 1 693 . + 0 ID=cds-TGD36012.1;Parent=gene-C9F07_33290;Dbxref=NCBI_GP:TGD36012.1;Name=TGD36012.1;Note=with AsrAC catalyzes the reduction of sulfite to hydrogen sulfide;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=C9F07_33290;partial=true;product=anaerobic sulfite reductase subunit AsrB;protein_id=TGD36012.1;start_range=.,1;transl_table=11 PYKI01003309.1 Genbank pseudogene 704 1012 . + . ID=gene-C9F07_33295;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=pseudogene;locus_tag=C9F07_33295;pseudo=true PYKI01003309.1 Protein Homology CDS 704 1012 . + 0 ID=cds-C9F07_33295;Parent=gene-C9F07_33295;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=asrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457081.1;locus_tag=C9F07_33295;product=anaerobic sulfite reductase subunit AsrC;pseudo=true;transl_table=11 ##sequence-region PYKI01000700.1 1 1118 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000700.1 Genbank region 1 1118 . + . ID=PYKI01000700.1:1..1118;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000700.1 Genbank pseudogene 1 255 . - . ID=gene-C9F07_06140;Name=C9F07_06140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06140;pseudo=true PYKI01000700.1 Protein Homology CDS 1 255 . - 0 ID=cds-C9F07_06140;Parent=gene-C9F07_06140;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458274.1;locus_tag=C9F07_06140;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 PYKI01000700.1 Genbank gene 243 530 . - . ID=gene-C9F07_06145;Name=C9F07_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06145 PYKI01000700.1 Protein Homology CDS 243 530 . - 0 ID=cds-TGE11317.1;Parent=gene-C9F07_06145;Dbxref=NCBI_GP:TGE11317.1;Name=TGE11317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462553.1;locus_tag=C9F07_06145;product=hypothetical protein;protein_id=TGE11317.1;transl_table=11 ##sequence-region PYKI01000908.1 1 1118 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000908.1 Genbank region 1 1118 . + . ID=PYKI01000908.1:1..1118;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000908.1 Genbank gene 1 576 . + . ID=gene-C9F07_08280;Name=C9F07_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08280;partial=true;start_range=.,1 PYKI01000908.1 Protein Homology CDS 1 576 . + 0 ID=cds-TGE03105.1;Parent=gene-C9F07_08280;Dbxref=NCBI_GP:TGE03105.1;Name=TGE03105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=C9F07_08280;partial=true;product=Nif3-like dinuclear metal center hexameric protein;protein_id=TGE03105.1;start_range=.,1;transl_table=11 PYKI01000908.1 Genbank gene 592 1118 . + . ID=gene-C9F07_08285;Name=C9F07_08285;end_range=1118,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08285;partial=true PYKI01000908.1 Protein Homology CDS 592 1118 . + 0 ID=cds-TGE03106.1;Parent=gene-C9F07_08285;Dbxref=NCBI_GP:TGE03106.1;Name=TGE03106.1;end_range=1118,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=C9F07_08285;partial=true;product=hypothetical protein;protein_id=TGE03106.1;transl_table=11 ##sequence-region PYKI01001143.1 1 1117 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001143.1 Genbank region 1 1117 . + . ID=PYKI01001143.1:1..1117;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001143.1 Genbank gene 1 1117 . - . ID=gene-C9F07_10665;Name=C9F07_10665;end_range=1117,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10665;partial=true;start_range=.,1 PYKI01001143.1 Protein Homology CDS 1 1117 . - 1 ID=cds-TGD94218.1;Parent=gene-C9F07_10665;Dbxref=NCBI_GP:TGD94218.1;Name=TGD94218.1;Note=sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein;end_range=1117,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=C9F07_10665;partial=true;product=two-component system sensor histidine kinase KdbD;protein_id=TGD94218.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003244.1 1 1117 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003244.1 Genbank region 1 1117 . + . ID=PYKI01003244.1:1..1117;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003244.1 Genbank pseudogene 1 1041 . + . ID=gene-C9F07_32670;Name=C9F07_32670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32670;pseudo=true PYKI01003244.1 Protein Homology CDS 1 1041 . + 0 ID=cds-C9F07_32670;Parent=gene-C9F07_32670;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457745.1;locus_tag=C9F07_32670;product=DUF3971 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002320.1 1 3854 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002320.1 Genbank region 1 3854 . + . ID=PYKI01002320.1:1..3854;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002320.1 Genbank pseudogene 1 425 . + . ID=gene-C9F07_22745;Name=C9F07_22745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22745;pseudo=true PYKI01002320.1 Protein Homology CDS 1 425 . + 0 ID=cds-C9F07_22745;Parent=gene-C9F07_22745;Note=frameshifted%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=C9F07_22745;product=IS3 family transposase;pseudo=true;transl_table=11 PYKI01002320.1 Genbank gene 1189 1683 . + . ID=gene-C9F07_22750;Name=C9F07_22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22750 PYKI01002320.1 Protein Homology CDS 1189 1683 . + 0 ID=cds-TGD54101.1;Parent=gene-C9F07_22750;Dbxref=NCBI_GP:TGD54101.1;Name=TGD54101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000835845.1;locus_tag=C9F07_22750;product=pilus assembly protein;protein_id=TGD54101.1;transl_table=11 PYKI01002320.1 Genbank gene 1767 2504 . + . ID=gene-C9F07_22755;Name=C9F07_22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22755 PYKI01002320.1 Protein Homology CDS 1767 2504 . + 0 ID=cds-TGD54102.1;Parent=gene-C9F07_22755;Dbxref=NCBI_GP:TGD54102.1;Name=TGD54102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454906.1;locus_tag=C9F07_22755;product=pili assembly chaperone protein SafB;protein_id=TGD54102.1;transl_table=11 PYKI01002320.1 Genbank pseudogene 2528 3811 . + . ID=gene-C9F07_22760;Name=C9F07_22760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22760;pseudo=true PYKI01002320.1 Protein Homology CDS 2528 3811 . + 0 ID=cds-C9F07_22760;Parent=gene-C9F07_22760;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454907.1;locus_tag=C9F07_22760;product=pilin outer membrane usher protein SafC;pseudo=true;transl_table=11 ##sequence-region PYKI01003102.1 1 1116 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003102.1 Genbank region 1 1116 . + . ID=PYKI01003102.1:1..1116;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003102.1 Genbank pseudogene 63 908 . - . ID=gene-C9F07_31060;Name=C9F07_31060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31060;pseudo=true PYKI01003102.1 Protein Homology CDS 63 908 . - 0 ID=cds-C9F07_31060;Parent=gene-C9F07_31060;Note=involved in resistance to the phages N4 and lambda%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456772.1;locus_tag=C9F07_31060;product=cyclic di-GMP phosphodiesterase;pseudo=true;transl_table=11 ##sequence-region PYKI01002464.1 1 1115 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002464.1 Genbank region 1 1115 . + . ID=PYKI01002464.1:1..1115;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002464.1 Genbank gene 1 193 . - . ID=gene-C9F07_24325;Name=C9F07_24325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24325;partial=true;start_range=.,1 PYKI01002464.1 Protein Homology CDS 1 193 . - 0 ID=cds-TGD50715.1;Parent=gene-C9F07_24325;Dbxref=NCBI_GP:TGD50715.1;Name=TGD50715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=C9F07_24325;partial=true;product=hypothetical protein;protein_id=TGD50715.1;start_range=.,1;transl_table=11 PYKI01002464.1 Genbank gene 342 842 . + . ID=gene-C9F07_24330;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=C9F07_24330 PYKI01002464.1 Protein Homology CDS 342 842 . + 0 ID=cds-TGD50716.1;Parent=gene-C9F07_24330;Dbxref=NCBI_GP:TGD50716.1;Name=TGD50716.1;Note=repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=C9F07_24330;product=stress adaptor protein CpxP;protein_id=TGD50716.1;transl_table=11 PYKI01002464.1 Genbank gene 990 1115 . + . ID=gene-C9F07_24335;Name=fieF;end_range=1115,.;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;gene_synonym=yiiP;locus_tag=C9F07_24335;partial=true PYKI01002464.1 Protein Homology CDS 990 1115 . + 0 ID=cds-TGD50717.1;Parent=gene-C9F07_24335;Dbxref=NCBI_GP:TGD50717.1;Name=TGD50717.1;Note=member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc(II) in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers;end_range=1115,.;gbkey=CDS;gene=fieF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457990.1;locus_tag=C9F07_24335;partial=true;product=divalent metal cation transporter FieF;protein_id=TGD50717.1;transl_table=11 ##sequence-region PYKI01001280.1 1 1114 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001280.1 Genbank region 1 1114 . + . ID=PYKI01001280.1:1..1114;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001280.1 Genbank gene 1 579 . - . ID=gene-C9F07_12005;Name=C9F07_12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12005;partial=true;start_range=.,1 PYKI01001280.1 Protein Homology CDS 1 579 . - 0 ID=cds-TGD87779.1;Parent=gene-C9F07_12005;Dbxref=NCBI_GP:TGD87779.1;Name=TGD87779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=C9F07_12005;partial=true;product=MBL fold protein;protein_id=TGD87779.1;start_range=.,1;transl_table=11 PYKI01001280.1 Genbank gene 653 1114 . + . ID=gene-C9F07_12010;Name=C9F07_12010;end_range=1114,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12010;partial=true PYKI01001280.1 Protein Homology CDS 653 1114 . + 0 ID=cds-TGD87780.1;Parent=gene-C9F07_12010;Dbxref=NCBI_GP:TGD87780.1;Name=TGD87780.1;end_range=1114,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=C9F07_12010;partial=true;product=LysR family transcriptional regulator;protein_id=TGD87780.1;transl_table=11 ##sequence-region PYKI01000994.1 1 1114 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000994.1 Genbank region 1 1114 . + . ID=PYKI01000994.1:1..1114;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000994.1 Genbank pseudogene 80 775 . + . ID=gene-C9F07_09075;Name=C9F07_09075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09075;pseudo=true PYKI01000994.1 Protein Homology CDS 80 775 . + 0 ID=cds-C9F07_09075;Parent=gene-C9F07_09075;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475698.1;locus_tag=C9F07_09075;product=PTS glucose transporter subunit IIBC;pseudo=true;transl_table=11 PYKI01000994.1 Genbank pseudogene 860 1114 . - . ID=gene-C9F07_09080;Name=C9F07_09080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09080;pseudo=true PYKI01000994.1 Protein Homology CDS 860 1114 . - 0 ID=cds-C9F07_09080;Parent=gene-C9F07_09080;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=C9F07_09080;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;pseudo=true;transl_table=11 ##sequence-region PYKI01001625.1 1 1113 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001625.1 Genbank region 1 1113 . + . ID=PYKI01001625.1:1..1113;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001625.1 Genbank pseudogene 127 852 . + . ID=gene-C9F07_15515;Name=C9F07_15515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15515;pseudo=true PYKI01001625.1 Protein Homology CDS 127 852 . + 0 ID=cds-C9F07_15515;Parent=gene-C9F07_15515;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000742011.1;locus_tag=C9F07_15515;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001625.1 Genbank gene 920 1113 . + . ID=gene-C9F07_15520;Name=C9F07_15520;end_range=1113,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15520;partial=true PYKI01001625.1 Protein Homology CDS 920 1113 . + 0 ID=cds-TGD70588.1;Parent=gene-C9F07_15520;Dbxref=NCBI_GP:TGD70588.1;Name=TGD70588.1;end_range=1113,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457027.1;locus_tag=C9F07_15520;partial=true;product=gluconate:proton symporter;protein_id=TGD70588.1;transl_table=11 ##sequence-region PYKI01002410.1 1 1113 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002410.1 Genbank region 1 1113 . + . ID=PYKI01002410.1:1..1113;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002410.1 Genbank gene 253 1095 . - . ID=gene-C9F07_23825;Name=C9F07_23825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23825 PYKI01002410.1 Protein Homology CDS 253 1095 . - 0 ID=cds-TGD51728.1;Parent=gene-C9F07_23825;Dbxref=NCBI_GP:TGD51728.1;Name=TGD51728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=C9F07_23825;product=3-mercaptopyruvate sulfurtransferase;protein_id=TGD51728.1;transl_table=11 ##sequence-region PYKI01000406.1 1 1113 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000406.1 Genbank region 1 1113 . + . ID=PYKI01000406.1:1..1113;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000406.1 Genbank gene 1 1113 . - . ID=gene-C9F07_03105;Name=rne;end_range=1113,.;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=C9F07_03105;partial=true;start_range=.,1 PYKI01000406.1 Protein Homology CDS 1 1113 . - 0 ID=cds-TGE21037.1;Parent=gene-C9F07_03105;Dbxref=NCBI_GP:TGE21037.1;Name=TGE21037.1;Note=bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein%3B forms part of the membrane-associated degradosome complex along with PNPase%2C RhlB%2C and enolase;end_range=1113,.;gbkey=CDS;gene=rne;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=C9F07_03105;partial=true;product=ribonuclease E;protein_id=TGE21037.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001835.1 1 1113 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001835.1 Genbank region 1 1113 . + . ID=PYKI01001835.1:1..1113;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001835.1 Genbank pseudogene 68 1027 . + . ID=gene-C9F07_17650;Name=C9F07_17650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17650;pseudo=true PYKI01001835.1 Protein Homology CDS 68 1027 . + 0 ID=cds-C9F07_17650;Parent=gene-C9F07_17650;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457302.1;locus_tag=C9F07_17650;product=MFS transporter;pseudo=true;transl_table=11 PYKI01001835.1 Genbank gene 1024 1113 . + . ID=gene-C9F07_17655;Name=C9F07_17655;end_range=1113,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17655;partial=true PYKI01001835.1 Protein Homology CDS 1024 1113 . + 0 ID=cds-TGD64208.1;Parent=gene-C9F07_17655;Dbxref=NCBI_GP:TGD64208.1;Name=TGD64208.1;end_range=1113,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=C9F07_17655;partial=true;product=DUF4440 domain-containing protein;protein_id=TGD64208.1;transl_table=11 ##sequence-region PYKI01000669.1 1 1111 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000669.1 Genbank region 1 1111 . + . ID=PYKI01000669.1:1..1111;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000669.1 Genbank gene 1 118 . - . ID=gene-C9F07_05830;Name=C9F07_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05830;partial=true;start_range=.,1 PYKI01000669.1 Protein Homology CDS 1 118 . - 0 ID=cds-TGE11797.1;Parent=gene-C9F07_05830;Dbxref=NCBI_GP:TGE11797.1;Name=TGE11797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455820.1;locus_tag=C9F07_05830;partial=true;product=transcriptional regulator;protein_id=TGE11797.1;start_range=.,1;transl_table=11 PYKI01000669.1 Genbank gene 266 1111 . - . ID=gene-C9F07_05835;Name=C9F07_05835;end_range=1111,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05835;partial=true PYKI01000669.1 Protein Homology CDS 266 1111 . - 0 ID=cds-TGE11798.1;Parent=gene-C9F07_05835;Dbxref=NCBI_GP:TGE11798.1;Name=TGE11798.1;end_range=1111,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=C9F07_05835;partial=true;product=TIGR01620 family protein;protein_id=TGE11798.1;transl_table=11 ##sequence-region PYKI01002699.1 1 3852 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002699.1 Genbank region 1 3852 . + . ID=PYKI01002699.1:1..3852;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002699.1 Genbank gene 89 793 . + . ID=gene-C9F07_26915;Name=C9F07_26915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26915 PYKI01002699.1 Protein Homology CDS 89 793 . + 0 ID=cds-TGD48154.1;Parent=gene-C9F07_26915;Dbxref=NCBI_GP:TGD48154.1;Name=TGD48154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457920.1;locus_tag=C9F07_26915;product=50S ribosomal protein L1;protein_id=TGD48154.1;transl_table=11 PYKI01002699.1 Genbank pseudogene 985 1193 . - . ID=gene-C9F07_26920;Name=C9F07_26920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26920;pseudo=true PYKI01002699.1 Protein Homology CDS 985 1193 . - 0 ID=cds-C9F07_26920;Parent=gene-C9F07_26920;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146311.1;locus_tag=C9F07_26920;product=transcriptional regulator;pseudo=true;transl_table=11 PYKI01002699.1 Genbank gene 1209 1706 . + . ID=gene-C9F07_26925;Name=C9F07_26925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26925 PYKI01002699.1 Protein Homology CDS 1209 1706 . + 0 ID=cds-TGD48155.1;Parent=gene-C9F07_26925;Dbxref=NCBI_GP:TGD48155.1;Name=TGD48155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=C9F07_26925;product=50S ribosomal protein L10;protein_id=TGD48155.1;transl_table=11 PYKI01002699.1 Genbank gene 1773 2138 . + . ID=gene-C9F07_26930;Name=C9F07_26930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26930 PYKI01002699.1 Protein Homology CDS 1773 2138 . + 0 ID=cds-TGD48156.1;Parent=gene-C9F07_26930;Dbxref=NCBI_GP:TGD48156.1;Name=TGD48156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=C9F07_26930;product=50S ribosomal protein L7/L12;protein_id=TGD48156.1;transl_table=11 PYKI01002699.1 Genbank gene 2456 3852 . + . ID=gene-C9F07_26935;Name=C9F07_26935;end_range=3852,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26935;partial=true PYKI01002699.1 Protein Homology CDS 2456 3852 . + 0 ID=cds-TGD48157.1;Parent=gene-C9F07_26935;Dbxref=NCBI_GP:TGD48157.1;Name=TGD48157.1;end_range=3852,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457917.1;locus_tag=C9F07_26935;partial=true;product=DNA-directed RNA polymerase subunit beta;protein_id=TGD48157.1;transl_table=11 ##sequence-region PYKI01002350.1 1 1110 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002350.1 Genbank region 1 1110 . + . ID=PYKI01002350.1:1..1110;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002350.1 Genbank gene 1 1110 . - . ID=gene-C9F07_23085;Name=C9F07_23085;end_range=1110,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23085;partial=true;start_range=.,1 PYKI01002350.1 Protein Homology CDS 1 1110 . - 2 ID=cds-TGD53296.1;Parent=gene-C9F07_23085;Dbxref=NCBI_GP:TGD53296.1;Name=TGD53296.1;end_range=1110,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9F07_23085;partial=true;product=large repetitive protein;protein_id=TGD53296.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001851.1 1 1110 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001851.1 Genbank region 1 1110 . + . ID=PYKI01001851.1:1..1110;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001851.1 Genbank pseudogene 291 422 . - . ID=gene-C9F07_17815;Name=C9F07_17815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17815;pseudo=true PYKI01001851.1 Protein Homology CDS 291 422 . - 0 ID=cds-C9F07_17815;Parent=gene-C9F07_17815;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328668.1;locus_tag=C9F07_17815;product=methionine aminopeptidase;pseudo=true;transl_table=11 PYKI01001851.1 Genbank pseudogene 396 1046 . + . ID=gene-C9F07_17820;Name=C9F07_17820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17820;pseudo=true PYKI01001851.1 Protein Homology CDS 396 1046 . + 0 ID=cds-C9F07_17820;Parent=gene-C9F07_17820;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458989.1;locus_tag=C9F07_17820;product=energy-dependent translational throttle protein EttA;pseudo=true;transl_table=11 ##sequence-region PYKI01000540.1 1 1110 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000540.1 Genbank region 1 1110 . + . ID=PYKI01000540.1:1..1110;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000540.1 Genbank gene 1 98 . + . ID=gene-C9F07_04480;Name=C9F07_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04480;partial=true;start_range=.,1 PYKI01000540.1 Protein Homology CDS 1 98 . + 2 ID=cds-TGE15635.1;Parent=gene-C9F07_04480;Dbxref=NCBI_GP:TGE15635.1;Name=TGE15635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455408.1;locus_tag=C9F07_04480;partial=true;product=DUF2593 domain-containing protein;protein_id=TGE15635.1;start_range=.,1;transl_table=11 PYKI01000540.1 Genbank gene 132 1110 . + . ID=gene-C9F07_04485;Name=C9F07_04485;end_range=1110,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04485;partial=true PYKI01000540.1 Protein Homology CDS 132 1110 . + 0 ID=cds-TGE15636.1;Parent=gene-C9F07_04485;Dbxref=NCBI_GP:TGE15636.1;Name=TGE15636.1;end_range=1110,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459859.1;locus_tag=C9F07_04485;partial=true;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=TGE15636.1;transl_table=11 ##sequence-region PYKI01003158.1 1 1109 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003158.1 Genbank region 1 1109 . + . ID=PYKI01003158.1:1..1109;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003158.1 Genbank gene 1 182 . - . ID=gene-C9F07_31670;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=C9F07_31670;partial=true;start_range=.,1 PYKI01003158.1 Protein Homology CDS 1 182 . - 0 ID=cds-TGD38166.1;Parent=gene-C9F07_31670;Dbxref=NCBI_GP:TGD38166.1;Name=TGD38166.1;Note=in Escherichia coli this protein putatively regulates the sodium/proton (also pH-independent calcium/proton) antiporter chaA%3B has weak affinity for calcium and magnesium ions;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455733.1;locus_tag=C9F07_31670;partial=true;product=cation transport regulator;protein_id=TGD38166.1;start_range=.,1;transl_table=11 PYKI01003158.1 Genbank gene 449 1109 . + . ID=gene-C9F07_31675;Name=C9F07_31675;end_range=1109,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31675;partial=true PYKI01003158.1 Protein Homology CDS 449 1109 . + 0 ID=cds-TGD38165.1;Parent=gene-C9F07_31675;Dbxref=NCBI_GP:TGD38165.1;Name=TGD38165.1;end_range=1109,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455732.1;locus_tag=C9F07_31675;partial=true;product=sodium-potassium/proton antiporter ChaA;protein_id=TGD38165.1;transl_table=11 ##sequence-region PYKI01000502.1 1 1109 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000502.1 Genbank region 1 1109 . + . ID=PYKI01000502.1:1..1109;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000502.1 Genbank gene 1 226 . + . ID=gene-C9F07_04085;Name=C9F07_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04085;partial=true;start_range=.,1 PYKI01000502.1 Protein Homology CDS 1 226 . + 1 ID=cds-TGE17321.1;Parent=gene-C9F07_04085;Dbxref=NCBI_GP:TGE17321.1;Name=TGE17321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458507.1;locus_tag=C9F07_04085;partial=true;product=vitamin B12 dependent methionine synthase%2C activation domain protein;protein_id=TGE17321.1;start_range=.,1;transl_table=11 PYKI01000502.1 Genbank gene 493 1109 . + . ID=gene-C9F07_04090;Name=C9F07_04090;end_range=1109,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04090;partial=true PYKI01000502.1 Protein Homology CDS 493 1109 . + 0 ID=cds-TGE17322.1;Parent=gene-C9F07_04090;Dbxref=NCBI_GP:TGE17322.1;Name=TGE17322.1;end_range=1109,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458508.1;locus_tag=C9F07_04090;partial=true;product=hypothetical protein;protein_id=TGE17322.1;transl_table=11 ##sequence-region PYKI01000754.1 1 1108 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000754.1 Genbank region 1 1108 . + . ID=PYKI01000754.1:1..1108;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000754.1 Genbank pseudogene 116 295 . + . ID=gene-C9F07_06660;Name=C9F07_06660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06660;pseudo=true PYKI01000754.1 Protein Homology CDS 116 295 . + 0 ID=cds-C9F07_06660;Parent=gene-C9F07_06660;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=C9F07_06660;product=electron transporter RnfC;pseudo=true;transl_table=11 PYKI01000754.1 Genbank gene 296 1108 . + . ID=gene-C9F07_06665;Name=C9F07_06665;end_range=1108,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06665;partial=true PYKI01000754.1 Protein Homology CDS 296 1108 . + 0 ID=cds-TGE10671.1;Parent=gene-C9F07_06665;Dbxref=NCBI_GP:TGE10671.1;Name=TGE10671.1;end_range=1108,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=C9F07_06665;partial=true;product=electron transport complex subunit RsxD;protein_id=TGE10671.1;transl_table=11 ##sequence-region PYKI01003510.1 1 1107 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003510.1 Genbank region 1 1107 . + . ID=PYKI01003510.1:1..1107;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003510.1 Genbank gene 1 344 . - . ID=gene-C9F07_35395;Name=C9F07_35395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35395;partial=true;start_range=.,1 PYKI01003510.1 Protein Homology CDS 1 344 . - 0 ID=cds-TGD31874.1;Parent=gene-C9F07_35395;Dbxref=NCBI_GP:TGD31874.1;Name=TGD31874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458372.1;locus_tag=C9F07_35395;partial=true;product=ribokinase;protein_id=TGD31874.1;start_range=.,1;transl_table=11 PYKI01003510.1 Genbank gene 609 1088 . - . ID=gene-C9F07_35400;Name=C9F07_35400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35400 PYKI01003510.1 Protein Homology CDS 609 1088 . - 0 ID=cds-TGD31875.1;Parent=gene-C9F07_35400;Dbxref=NCBI_GP:TGD31875.1;Name=TGD31875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458373.1;locus_tag=C9F07_35400;product=N-acetyltransferase;protein_id=TGD31875.1;transl_table=11 ##sequence-region PYKI01002908.1 1 1106 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002908.1 Genbank region 1 1106 . + . ID=PYKI01002908.1:1..1106;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002908.1 Genbank gene 1 536 . + . ID=gene-C9F07_29120;Name=C9F07_29120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29120;partial=true;start_range=.,1 PYKI01002908.1 Protein Homology CDS 1 536 . + 2 ID=cds-TGD43692.1;Parent=gene-C9F07_29120;Dbxref=NCBI_GP:TGD43692.1;Name=TGD43692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=C9F07_29120;partial=true;product=aquaporin;protein_id=TGD43692.1;start_range=.,1;transl_table=11 PYKI01002908.1 Genbank gene 557 1106 . + . ID=gene-C9F07_29125;Name=glpK;end_range=1106,.;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=C9F07_29125;partial=true PYKI01002908.1 Protein Homology CDS 557 1106 . + 0 ID=cds-TGD43693.1;Parent=gene-C9F07_29125;Dbxref=NCBI_GP:TGD43693.1;Name=TGD43693.1;end_range=1106,.;gbkey=CDS;gene=glpK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=C9F07_29125;partial=true;product=glycerol kinase GlpK;protein_id=TGD43693.1;transl_table=11 ##sequence-region PYKI01001288.1 1 1106 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001288.1 Genbank region 1 1106 . + . ID=PYKI01001288.1:1..1106;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001288.1 Genbank gene 1 411 . - . ID=gene-C9F07_12055;Name=C9F07_12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12055;partial=true;start_range=.,1 PYKI01001288.1 Protein Homology CDS 1 411 . - 0 ID=cds-TGD87671.1;Parent=gene-C9F07_12055;Dbxref=NCBI_GP:TGD87671.1;Name=TGD87671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416368.1;locus_tag=C9F07_12055;partial=true;product=pyruvate kinase;protein_id=TGD87671.1;start_range=.,1;transl_table=11 PYKI01001288.1 Genbank gene 535 1106 . - . ID=gene-C9F07_12060;Name=C9F07_12060;end_range=1106,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12060;partial=true PYKI01001288.1 Protein Homology CDS 535 1106 . - 2 ID=cds-TGD87672.1;Parent=gene-C9F07_12060;Dbxref=NCBI_GP:TGD87672.1;Name=TGD87672.1;Note=Represses the expression of the zwf%2C eda%2C glp and gap;end_range=1106,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456454.1;locus_tag=C9F07_12060;partial=true;product=transcriptional regulator HexR;protein_id=TGD87672.1;transl_table=11 ##sequence-region PYKI01003340.1 1 1104 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003340.1 Genbank region 1 1104 . + . ID=PYKI01003340.1:1..1104;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003340.1 Genbank gene 160 1104 . - . ID=gene-C9F07_33605;Name=C9F07_33605;end_range=1104,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33605;partial=true PYKI01003340.1 Protein Homology CDS 160 1104 . - 0 ID=cds-TGD35073.1;Parent=gene-C9F07_33605;Dbxref=NCBI_GP:TGD35073.1;Name=TGD35073.1;Note=interacts with LdcI%2C lysine decarboxylase%3B may be active in late log/ early stationary phase;end_range=1104,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458064.1;locus_tag=C9F07_33605;partial=true;product=ATPase RavA;protein_id=TGD35073.1;transl_table=11 ##sequence-region PYKI01001050.1 1 3847 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001050.1 Genbank region 1 3847 . + . ID=PYKI01001050.1:1..3847;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001050.1 Genbank gene 1 1808 . - . ID=gene-C9F07_09700;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=C9F07_09700;partial=true;start_range=.,1 PYKI01001050.1 Protein Homology CDS 1 1808 . - 0 ID=cds-TGD96511.1;Parent=gene-C9F07_09700;Dbxref=NCBI_GP:TGD96511.1;Name=TGD96511.1;gbkey=CDS;gene=tkt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135049.1;locus_tag=C9F07_09700;partial=true;product=transketolase;protein_id=TGD96511.1;start_range=.,1;transl_table=11 PYKI01001050.1 Genbank gene 2084 2842 . + . ID=gene-C9F07_09705;Name=C9F07_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09705 PYKI01001050.1 Protein Homology CDS 2084 2842 . + 0 ID=cds-TGD96512.1;Parent=gene-C9F07_09705;Dbxref=NCBI_GP:TGD96512.1;Name=TGD96512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457477.1;locus_tag=C9F07_09705;product=metalloprotease;protein_id=TGD96512.1;transl_table=11 PYKI01001050.1 Genbank pseudogene 2849 2929 . - . ID=gene-C9F07_09710;Name=C9F07_09710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09710;pseudo=true PYKI01001050.1 Protein Homology CDS 2849 2929 . - 0 ID=cds-C9F07_09710;Parent=gene-C9F07_09710;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134742.1;locus_tag=C9F07_09710;product=phenylacetic acid degradation protein PaaY;pseudo=true;transl_table=11 PYKI01001050.1 Genbank gene 2943 3847 . - . ID=gene-C9F07_09715;Name=speB;end_range=3847,.;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=C9F07_09715;partial=true PYKI01001050.1 Protein Homology CDS 2943 3847 . - 2 ID=cds-TGD96513.1;Parent=gene-C9F07_09715;Dbxref=NCBI_GP:TGD96513.1;Name=TGD96513.1;end_range=3847,.;gbkey=CDS;gene=speB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457478.1;locus_tag=C9F07_09715;partial=true;product=agmatinase;protein_id=TGD96513.1;transl_table=11 ##sequence-region PYKI01001074.1 1 1104 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001074.1 Genbank region 1 1104 . + . ID=PYKI01001074.1:1..1104;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001074.1 Genbank pseudogene 49 372 . - . ID=gene-C9F07_09970;Name=C9F07_09970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09970;pseudo=true PYKI01001074.1 Protein Homology CDS 49 372 . - 0 ID=cds-C9F07_09970;Parent=gene-C9F07_09970;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131976.1;locus_tag=C9F07_09970;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001074.1 Genbank gene 365 1104 . - . ID=gene-C9F07_09975;Name=flhB;end_range=1104,.;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=C9F07_09975;partial=true PYKI01001074.1 Protein Homology CDS 365 1104 . - 2 ID=cds-TGD95831.1;Parent=gene-C9F07_09975;Dbxref=NCBI_GP:TGD95831.1;Name=TGD95831.1;Note=membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export;end_range=1104,.;gbkey=CDS;gene=flhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=C9F07_09975;partial=true;product=flagellar biosynthesis protein FlhB;protein_id=TGD95831.1;transl_table=11 ##sequence-region PYKI01003540.1 1 1101 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003540.1 Genbank region 1 1101 . + . ID=PYKI01003540.1:1..1101;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003540.1 Genbank gene 46 282 . - . ID=gene-C9F07_35735;Name=C9F07_35735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35735 PYKI01003540.1 Protein Homology CDS 46 282 . - 0 ID=cds-TGD31063.1;Parent=gene-C9F07_35735;Dbxref=NCBI_GP:TGD31063.1;Name=TGD31063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455148.1;locus_tag=C9F07_35735;product=hypothetical protein;protein_id=TGD31063.1;transl_table=11 PYKI01003540.1 Genbank gene 439 1101 . - . ID=gene-C9F07_35740;Name=C9F07_35740;end_range=1101,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35740;partial=true PYKI01003540.1 Protein Homology CDS 439 1101 . - 0 ID=cds-TGD31064.1;Parent=gene-C9F07_35740;Dbxref=NCBI_GP:TGD31064.1;Name=TGD31064.1;Note=Involved in disulfide oxidoreductase activity and electron transport;end_range=1101,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=C9F07_35740;partial=true;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=TGD31064.1;transl_table=11 ##sequence-region PYKI01002467.1 1 1101 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002467.1 Genbank region 1 1101 . + . ID=PYKI01002467.1:1..1101;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002467.1 Genbank gene 1 143 . - . ID=gene-C9F07_24360;Name=C9F07_24360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24360;partial=true;start_range=.,1 PYKI01002467.1 Protein Homology CDS 1 143 . - 0 ID=cds-TGD50658.1;Parent=gene-C9F07_24360;Dbxref=NCBI_GP:TGD50658.1;Name=TGD50658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455967.1;locus_tag=C9F07_24360;partial=true;product=stress-induced acidophilic repeat motif-containing protein;protein_id=TGD50658.1;start_range=.,1;transl_table=11 PYKI01002467.1 Genbank pseudogene 275 409 . - . ID=gene-C9F07_24365;Name=C9F07_24365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24365;pseudo=true PYKI01002467.1 Protein Homology CDS 275 409 . - 0 ID=cds-C9F07_24365;Parent=gene-C9F07_24365;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344059.1;locus_tag=C9F07_24365;product=peptidyl-dipeptidase dcp;pseudo=true;transl_table=11 PYKI01002467.1 Genbank pseudogene 488 1066 . - . ID=gene-C9F07_24370;Name=C9F07_24370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24370;pseudo=true PYKI01002467.1 Protein Homology CDS 488 1066 . - 0 ID=cds-C9F07_24370;Parent=gene-C9F07_24370;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=C9F07_24370;product=dipeptidyl carboxypeptidase II;pseudo=true;transl_table=11 ##sequence-region PYKI01000766.1 1 1100 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000766.1 Genbank region 1 1100 . + . ID=PYKI01000766.1:1..1100;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000766.1 Genbank pseudogene 1 720 . - . ID=gene-C9F07_06755;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=pseudogene;locus_tag=C9F07_06755;pseudo=true PYKI01000766.1 Protein Homology CDS 1 720 . - 0 ID=cds-C9F07_06755;Parent=gene-C9F07_06755;Note=catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5%2C6-dimethylbenzimidazole%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;gene=cobT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=C9F07_06755;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;pseudo=true;transl_table=11 PYKI01000766.1 Genbank gene 747 1031 . - . ID=gene-C9F07_06760;Name=C9F07_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06760 PYKI01000766.1 Protein Homology CDS 747 1031 . - 0 ID=cds-TGE09229.1;Parent=gene-C9F07_06760;Dbxref=NCBI_GP:TGE09229.1;Name=TGE09229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117936.1;locus_tag=C9F07_06760;product=cobalamin synthase;protein_id=TGE09229.1;transl_table=11 ##sequence-region PYKI01002462.1 1 1097 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002462.1 Genbank region 1 1097 . + . ID=PYKI01002462.1:1..1097;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002462.1 Genbank gene 1 370 . + . ID=gene-C9F07_24310;Name=C9F07_24310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24310;partial=true;start_range=.,1 PYKI01002462.1 Protein Homology CDS 1 370 . + 1 ID=cds-TGD50746.1;Parent=gene-C9F07_24310;Dbxref=NCBI_GP:TGD50746.1;Name=TGD50746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457732.1;locus_tag=C9F07_24310;partial=true;product=cation transporter;protein_id=TGD50746.1;start_range=.,1;transl_table=11 PYKI01002462.1 Genbank gene 403 1097 . + . ID=gene-C9F07_24315;Name=C9F07_24315;end_range=1097,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24315;partial=true PYKI01002462.1 Protein Homology CDS 403 1097 . + 0 ID=cds-TGD50747.1;Parent=gene-C9F07_24315;Dbxref=NCBI_GP:TGD50747.1;Name=TGD50747.1;end_range=1097,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457731.1;locus_tag=C9F07_24315;partial=true;product=L(+)-tartrate dehydratase subunit alpha;protein_id=TGD50747.1;transl_table=11 ##sequence-region PYKI01000941.1 1 1097 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000941.1 Genbank region 1 1097 . + . ID=PYKI01000941.1:1..1097;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000941.1 Genbank gene 1 399 . - . ID=gene-C9F07_08575;Name=C9F07_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08575;partial=true;start_range=.,1 PYKI01000941.1 Protein Homology CDS 1 399 . - 0 ID=cds-TGE02060.1;Parent=gene-C9F07_08575;Dbxref=NCBI_GP:TGE02060.1;Name=TGE02060.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456213.1;locus_tag=C9F07_08575;partial=true;product=glutamate dehydrogenase;protein_id=TGE02060.1;start_range=.,1;transl_table=11 PYKI01000941.1 Genbank gene 638 913 . + . ID=gene-C9F07_08580;Name=C9F07_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08580 PYKI01000941.1 Protein Homology CDS 638 913 . + 0 ID=cds-TGE02061.1;Parent=gene-C9F07_08580;Dbxref=NCBI_GP:TGE02061.1;Name=TGE02061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456212.1;locus_tag=C9F07_08580;product=DUF1496 domain-containing protein;protein_id=TGE02061.1;transl_table=11 PYKI01000941.1 Genbank gene 873 1097 . - . ID=gene-C9F07_08585;Name=C9F07_08585;end_range=1097,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08585;partial=true PYKI01000941.1 Protein Homology CDS 873 1097 . - 0 ID=cds-TGE02062.1;Parent=gene-C9F07_08585;Dbxref=NCBI_GP:TGE02062.1;Name=TGE02062.1;end_range=1097,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456211.1;locus_tag=C9F07_08585;partial=true;product=NTP pyrophosphohydrolase;protein_id=TGE02062.1;transl_table=11 ##sequence-region PYKI01003282.1 1 1096 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003282.1 Genbank region 1 1096 . + . ID=PYKI01003282.1:1..1096;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003282.1 Genbank gene 1 716 . + . ID=gene-C9F07_33005;Name=C9F07_33005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33005;partial=true;start_range=.,1 PYKI01003282.1 Protein Homology CDS 1 716 . + 2 ID=cds-TGD36141.1;Parent=gene-C9F07_33005;Dbxref=NCBI_GP:TGD36141.1;Name=TGD36141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=C9F07_33005;partial=true;product=glutamate/aspartate:proton symporter GltP;protein_id=TGD36141.1;start_range=.,1;transl_table=11 PYKI01003282.1 Genbank gene 874 1096 . - . ID=gene-C9F07_33010;Name=C9F07_33010;end_range=1096,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33010;partial=true PYKI01003282.1 Protein Homology CDS 874 1096 . - 1 ID=cds-TGD36142.1;Parent=gene-C9F07_33010;Dbxref=NCBI_GP:TGD36142.1;Name=TGD36142.1;end_range=1096,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458583.1;locus_tag=C9F07_33010;partial=true;product=hypothetical protein;protein_id=TGD36142.1;transl_table=11 ##sequence-region PYKI01001714.1 1 1096 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001714.1 Genbank region 1 1096 . + . ID=PYKI01001714.1:1..1096;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001714.1 Genbank gene 1 437 . - . ID=gene-C9F07_16365;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=C9F07_16365;partial=true;start_range=.,1 PYKI01001714.1 Protein Homology CDS 1 437 . - 0 ID=cds-TGD69104.1;Parent=gene-C9F07_16365;Dbxref=NCBI_GP:TGD69104.1;Name=TGD69104.1;gbkey=CDS;gene=moeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459823.3;locus_tag=C9F07_16365;partial=true;product=molybdopterin molybdotransferase MoeA;protein_id=TGD69104.1;start_range=.,1;transl_table=11 PYKI01001714.1 Genbank gene 635 1096 . + . ID=gene-C9F07_16370;Name=C9F07_16370;end_range=1096,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16370;partial=true PYKI01001714.1 Protein Homology CDS 635 1096 . + 0 ID=cds-TGD69103.1;Parent=gene-C9F07_16370;Dbxref=NCBI_GP:TGD69103.1;Name=TGD69103.1;end_range=1096,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455381.1;locus_tag=C9F07_16370;partial=true;product=beta-aspartyl-peptidase;protein_id=TGD69103.1;transl_table=11 ##sequence-region PYKI01000966.1 1 1095 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000966.1 Genbank region 1 1095 . + . ID=PYKI01000966.1:1..1095;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000966.1 Genbank gene 1 601 . - . ID=gene-C9F07_08820;Name=C9F07_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08820;partial=true;start_range=.,1 PYKI01000966.1 Protein Homology CDS 1 601 . - 0 ID=cds-TGE00445.1;Parent=gene-C9F07_08820;Dbxref=NCBI_GP:TGE00445.1;Name=TGE00445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=C9F07_08820;partial=true;product=benzoate transporter;protein_id=TGE00445.1;start_range=.,1;transl_table=11 PYKI01000966.1 Genbank gene 693 1095 . + . ID=gene-C9F07_08825;Name=C9F07_08825;end_range=1095,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08825;partial=true PYKI01000966.1 Protein Homology CDS 693 1095 . + 0 ID=cds-TGE00446.1;Parent=gene-C9F07_08825;Dbxref=NCBI_GP:TGE00446.1;Name=TGE00446.1;end_range=1095,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455892.1;locus_tag=C9F07_08825;partial=true;product=XRE family transcriptional regulator;protein_id=TGE00446.1;transl_table=11 ##sequence-region PYKI01000485.1 1 3845 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000485.1 Genbank region 1 3845 . + . ID=PYKI01000485.1:1..3845;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000485.1 Genbank gene 1 179 . - . ID=gene-C9F07_03890;Name=C9F07_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03890;partial=true;start_range=.,1 PYKI01000485.1 Protein Homology CDS 1 179 . - 0 ID=cds-TGE18384.1;Parent=gene-C9F07_03890;Dbxref=NCBI_GP:TGE18384.1;Name=TGE18384.1;Note=structural flagella protein%3B individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella%2C termed phase 1 and phase 2%2C each specified by separate structural genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456520.1;locus_tag=C9F07_03890;partial=true;product=flagellin FliC;protein_id=TGE18384.1;start_range=.,1;transl_table=11 PYKI01000485.1 Genbank gene 436 1839 . + . ID=gene-C9F07_03895;Name=C9F07_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03895 PYKI01000485.1 Protein Homology CDS 436 1839 . + 0 ID=cds-TGE18385.1;Parent=gene-C9F07_03895;Dbxref=NCBI_GP:TGE18385.1;Name=TGE18385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456521.1;locus_tag=C9F07_03895;product=flagellar filament capping protein FliD;protein_id=TGE18385.1;transl_table=11 PYKI01000485.1 Genbank gene 1854 2261 . + . ID=gene-C9F07_03900;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=C9F07_03900 PYKI01000485.1 Protein Homology CDS 1854 2261 . + 0 ID=cds-TGE18386.1;Parent=gene-C9F07_03900;Dbxref=NCBI_GP:TGE18386.1;Name=TGE18386.1;Note=flagellin specific chaperone;gbkey=CDS;gene=fliS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=C9F07_03900;product=flagellar protein FliS;protein_id=TGE18386.1;transl_table=11 PYKI01000485.1 Genbank gene 2261 2629 . + . ID=gene-C9F07_03905;Name=C9F07_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03905 PYKI01000485.1 Protein Homology CDS 2261 2629 . + 0 ID=cds-TGE18387.1;Parent=gene-C9F07_03905;Dbxref=NCBI_GP:TGE18387.1;Name=TGE18387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456523.1;locus_tag=C9F07_03905;product=flagellar protein FliT;protein_id=TGE18387.1;transl_table=11 PYKI01000485.1 Genbank pseudogene 2701 3822 . + . ID=gene-C9F07_03910;Name=C9F07_03910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03910;pseudo=true PYKI01000485.1 Protein Homology CDS 2701 3822 . + 0 ID=cds-C9F07_03910;Parent=gene-C9F07_03910;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=C9F07_03910;product=alpha-amylase;pseudo=true;transl_table=11 ##sequence-region PYKI01001361.1 1 1094 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001361.1 Genbank region 1 1094 . + . ID=PYKI01001361.1:1..1094;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001361.1 Genbank gene 1 76 . + . ID=gene-C9F07_12790;Name=C9F07_12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12790;partial=true;start_range=.,1 PYKI01001361.1 Protein Homology CDS 1 76 . + 1 ID=cds-TGD85003.1;Parent=gene-C9F07_12790;Dbxref=NCBI_GP:TGD85003.1;Name=TGD85003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455139.1;locus_tag=C9F07_12790;partial=true;product=fimbriae Y protein;protein_id=TGD85003.1;start_range=.,1;transl_table=11 PYKI01001361.1 Genbank gene 680 1094 . + . ID=gene-C9F07_12795;Name=C9F07_12795;end_range=1094,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12795;partial=true PYKI01001361.1 Protein Homology CDS 680 1094 . + 0 ID=cds-TGD85002.1;Parent=gene-C9F07_12795;Dbxref=NCBI_GP:TGD85002.1;Name=TGD85002.1;end_range=1094,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=C9F07_12795;partial=true;product=fimbriae biosynthesis transcriptional regulator FimZ;protein_id=TGD85002.1;transl_table=11 ##sequence-region PYKI01003573.1 1 1093 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003573.1 Genbank region 1 1093 . + . ID=PYKI01003573.1:1..1093;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003573.1 Genbank gene 1 704 . + . ID=gene-C9F07_36070;Name=C9F07_36070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36070;partial=true;start_range=.,1 PYKI01003573.1 Protein Homology CDS 1 704 . + 2 ID=cds-TGD30236.1;Parent=gene-C9F07_36070;Dbxref=NCBI_GP:TGD30236.1;Name=TGD30236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458941.1;locus_tag=C9F07_36070;partial=true;product=MFS transporter;protein_id=TGD30236.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001203.1 1 1092 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001203.1 Genbank region 1 1092 . + . ID=PYKI01001203.1:1..1092;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001203.1 Genbank gene 1 226 . + . ID=gene-C9F07_11280;Name=C9F07_11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11280;partial=true;start_range=.,1 PYKI01001203.1 Protein Homology CDS 1 226 . + 1 ID=cds-TGD91581.1;Parent=gene-C9F07_11280;Dbxref=NCBI_GP:TGD91581.1;Name=TGD91581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=C9F07_11280;partial=true;product=potassium transporter TrkH;protein_id=TGD91581.1;start_range=.,1;transl_table=11 PYKI01001203.1 Genbank gene 238 783 . + . ID=gene-C9F07_11285;Name=C9F07_11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11285 PYKI01001203.1 Protein Homology CDS 238 783 . + 0 ID=cds-TGD91582.1;Parent=gene-C9F07_11285;Dbxref=NCBI_GP:TGD91582.1;Name=TGD91582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457765.1;locus_tag=C9F07_11285;product=protoporphyrinogen oxidase;protein_id=TGD91582.1;transl_table=11 ##sequence-region PYKI01002752.1 1 1092 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002752.1 Genbank region 1 1092 . + . ID=PYKI01002752.1:1..1092;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002752.1 Genbank gene 222 1092 . + . ID=gene-C9F07_27475;Name=C9F07_27475;end_range=1092,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27475;partial=true PYKI01002752.1 Protein Homology CDS 222 1092 . + 0 ID=cds-TGD46850.1;Parent=gene-C9F07_27475;Dbxref=NCBI_GP:TGD46850.1;Name=TGD46850.1;Note=is involved in resistance to acriflavine%2C chloramphenicol%2C norfloxacin%2C ethidium bromide and TPP;end_range=1092,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458943.1;locus_tag=C9F07_27475;partial=true;product=MFS transporter;protein_id=TGD46850.1;transl_table=11 ##sequence-region PYKI01002226.1 1 1092 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002226.1 Genbank region 1 1092 . + . ID=PYKI01002226.1:1..1092;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002226.1 Genbank gene 1 72 . + . ID=gene-C9F07_21705;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=C9F07_21705;partial=true;start_range=.,1 PYKI01002226.1 Protein Homology CDS 1 72 . + 0 ID=cds-TGD56206.1;Parent=gene-C9F07_21705;Dbxref=NCBI_GP:TGD56206.1;Name=TGD56206.1;Note=Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids;gbkey=CDS;gene=acpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457106.1;locus_tag=C9F07_21705;partial=true;product=holo-ACP synthase;protein_id=TGD56206.1;start_range=.,1;transl_table=11 PYKI01002226.1 Genbank gene 184 444 . - . ID=gene-C9F07_21710;Name=C9F07_21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21710 PYKI01002226.1 Protein Homology CDS 184 444 . - 0 ID=cds-TGD56205.1;Parent=gene-C9F07_21710;Dbxref=NCBI_GP:TGD56205.1;Name=TGD56205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=C9F07_21710;product=ferredoxin;protein_id=TGD56205.1;transl_table=11 PYKI01002226.1 Genbank gene 482 1092 . - . ID=gene-C9F07_21715;Name=C9F07_21715;end_range=1092,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21715;partial=true PYKI01002226.1 Protein Homology CDS 482 1092 . - 2 ID=cds-TGD56207.1;Parent=gene-C9F07_21715;Dbxref=NCBI_GP:TGD56207.1;Name=TGD56207.1;end_range=1092,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=C9F07_21715;partial=true;product=LysR family transcriptional regulator;protein_id=TGD56207.1;transl_table=11 ##sequence-region PYKI01002587.1 1 1090 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002587.1 Genbank region 1 1090 . + . ID=PYKI01002587.1:1..1090;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002587.1 Genbank gene 2 77 . - . ID=gene-C9F07_25670;Name=C9F07_25670;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_25670 PYKI01002587.1 tRNAscan-SE tRNA 2 77 . - . ID=rna-C9F07_25670;Parent=gene-C9F07_25670;anticodon=(pos:complement(42..44));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_25670;product=tRNA-Val PYKI01002587.1 tRNAscan-SE exon 2 77 . - . ID=exon-C9F07_25670-1;Parent=rna-C9F07_25670;anticodon=(pos:complement(42..44));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_25670;product=tRNA-Val PYKI01002587.1 Genbank gene 336 1090 . + . ID=gene-C9F07_25675;Name=gltX;end_range=1090,.;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=C9F07_25675;partial=true PYKI01002587.1 Protein Homology CDS 336 1090 . + 0 ID=cds-TGD49699.1;Parent=gene-C9F07_25675;Dbxref=NCBI_GP:TGD49699.1;Name=TGD49699.1;end_range=1090,.;gbkey=CDS;gene=gltX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695624.1;locus_tag=C9F07_25675;partial=true;product=glutamate--tRNA ligase;protein_id=TGD49699.1;transl_table=11 ##sequence-region PYKI01003389.1 1 1089 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003389.1 Genbank region 1 1089 . + . ID=PYKI01003389.1:1..1089;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003389.1 Genbank gene 1 1089 . - . ID=gene-C9F07_34095;Name=C9F07_34095;end_range=1089,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34095;partial=true;start_range=.,1 PYKI01003389.1 Protein Homology CDS 1 1089 . - 2 ID=cds-TGD34152.1;Parent=gene-C9F07_34095;Dbxref=NCBI_GP:TGD34152.1;Name=TGD34152.1;end_range=1089,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456089.1;locus_tag=C9F07_34095;partial=true;product=fusaric acid resistance protein;protein_id=TGD34152.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003289.1 1 1088 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003289.1 Genbank region 1 1088 . + . ID=PYKI01003289.1:1..1088;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003289.1 Genbank pseudogene 65 1088 . - . ID=gene-C9F07_33090;Name=C9F07_33090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33090;pseudo=true PYKI01003289.1 Protein Homology CDS 65 1088 . - 1 ID=cds-C9F07_33090;Parent=gene-C9F07_33090;Note=with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=C9F07_33090;product=p-hydroxybenzoic acid efflux pump subunit AaeB;pseudo=true;transl_table=11 ##sequence-region PYKI01000360.1 1 1087 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000360.1 Genbank region 1 1087 . + . ID=PYKI01000360.1:1..1087;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000360.1 Genbank gene 1 1087 . - . ID=gene-C9F07_02720;Name=C9F07_02720;end_range=1087,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02720;partial=true;start_range=.,1 PYKI01000360.1 Protein Homology CDS 1 1087 . - 2 ID=cds-TGE23196.1;Parent=gene-C9F07_02720;Dbxref=NCBI_GP:TGE23196.1;Name=TGE23196.1;end_range=1087,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454708.1;locus_tag=C9F07_02720;partial=true;product=RNA polymerase-associated protein RapA;protein_id=TGE23196.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003491.1 1 1087 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003491.1 Genbank region 1 1087 . + . ID=PYKI01003491.1:1..1087;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003491.1 Genbank gene 1 1087 . + . ID=gene-C9F07_35120;Name=C9F07_35120;end_range=1087,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35120;partial=true;start_range=.,1 PYKI01003491.1 Protein Homology CDS 1 1087 . + 2 ID=cds-TGD32190.1;Parent=gene-C9F07_35120;Dbxref=NCBI_GP:TGD32190.1;Name=TGD32190.1;end_range=1087,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454681.1;locus_tag=C9F07_35120;partial=true;product=crotonobetaine/carnitine-CoA ligase;protein_id=TGD32190.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001065.1 1 3834 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001065.1 Genbank region 1 3834 . + . ID=PYKI01001065.1:1..3834;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001065.1 Genbank gene 1 1143 . + . ID=gene-C9F07_09815;Name=C9F07_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09815;partial=true;start_range=.,1 PYKI01001065.1 Protein Homology CDS 1 1143 . + 0 ID=cds-TGD96111.1;Parent=gene-C9F07_09815;Dbxref=NCBI_GP:TGD96111.1;Name=TGD96111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=C9F07_09815;partial=true;product=voltage-gated ClC-type chloride channel ClcB;protein_id=TGD96111.1;start_range=.,1;transl_table=11 PYKI01001065.1 Genbank gene 1099 1794 . - . ID=gene-C9F07_09820;Name=C9F07_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09820 PYKI01001065.1 Protein Homology CDS 1099 1794 . - 0 ID=cds-TGD96112.1;Parent=gene-C9F07_09820;Dbxref=NCBI_GP:TGD96112.1;Name=TGD96112.1;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=C9F07_09820;product=dethiobiotin synthase;protein_id=TGD96112.1;transl_table=11 PYKI01001065.1 Genbank gene 1920 3140 . - . ID=gene-C9F07_09825;Name=C9F07_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09825 PYKI01001065.1 Protein Homology CDS 1920 3140 . - 0 ID=cds-TGD96113.1;Parent=gene-C9F07_09825;Dbxref=NCBI_GP:TGD96113.1;Name=TGD96113.1;Note=mlc%2C controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems%2C regulates genes involved in the uptake of sugars;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=C9F07_09825;product=transcriptional regulator;protein_id=TGD96113.1;transl_table=11 PYKI01001065.1 Genbank gene 3268 3834 . - . ID=gene-C9F07_09830;Name=C9F07_09830;end_range=3834,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09830;partial=true PYKI01001065.1 Protein Homology CDS 3268 3834 . - 0 ID=cds-TGD96114.1;Parent=gene-C9F07_09830;Dbxref=NCBI_GP:TGD96114.1;Name=TGD96114.1;end_range=3834,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=C9F07_09830;partial=true;product=LysR family transcriptional regulator;protein_id=TGD96114.1;transl_table=11 ##sequence-region PYKI01000367.1 1 1086 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000367.1 Genbank region 1 1086 . + . ID=PYKI01000367.1:1..1086;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000367.1 Genbank gene 1 472 . - . ID=gene-C9F07_02770;Name=C9F07_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02770;partial=true;start_range=.,1 PYKI01000367.1 Protein Homology CDS 1 472 . - 0 ID=cds-TGE23188.1;Parent=gene-C9F07_02770;Dbxref=NCBI_GP:TGE23188.1;Name=TGE23188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457437.1;locus_tag=C9F07_02770;partial=true;product=isopentenyl-diphosphate Delta-isomerase;protein_id=TGE23188.1;start_range=.,1;transl_table=11 PYKI01000367.1 Genbank gene 523 711 . - . ID=gene-C9F07_02775;Name=C9F07_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02775 PYKI01000367.1 Protein Homology CDS 523 711 . - 0 ID=cds-TGE23189.1;Parent=gene-C9F07_02775;Dbxref=NCBI_GP:TGE23189.1;Name=TGE23189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344168.1;locus_tag=C9F07_02775;product=hypothetical protein;protein_id=TGE23189.1;transl_table=11 PYKI01000367.1 Genbank pseudogene 737 1086 . + . ID=gene-C9F07_02780;Name=C9F07_02780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02780;pseudo=true PYKI01000367.1 Protein Homology CDS 737 1086 . + 0 ID=cds-C9F07_02780;Parent=gene-C9F07_02780;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=C9F07_02780;product=endopeptidase;pseudo=true;transl_table=11 ##sequence-region PYKI01000375.1 1 1086 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000375.1 Genbank region 1 1086 . + . ID=PYKI01000375.1:1..1086;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000375.1 Genbank pseudogene 91 1086 . + . ID=gene-C9F07_02835;Name=tppB;gbkey=Gene;gene=tppB;gene_biotype=pseudogene;gene_synonym=ydgR;locus_tag=C9F07_02835;pseudo=true PYKI01000375.1 Protein Homology CDS 91 1086 . + 0 ID=cds-C9F07_02835;Parent=gene-C9F07_02835;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=tppB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=C9F07_02835;product=dipeptide/tripeptide permease;pseudo=true;transl_table=11 ##sequence-region PYKI01002374.1 1 1085 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002374.1 Genbank region 1 1085 . + . ID=PYKI01002374.1:1..1085;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002374.1 Genbank gene 1 830 . - . ID=gene-C9F07_23325;Name=C9F07_23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23325;partial=true;start_range=.,1 PYKI01002374.1 Protein Homology CDS 1 830 . - 0 ID=cds-TGD52657.1;Parent=gene-C9F07_23325;Dbxref=NCBI_GP:TGD52657.1;Name=TGD52657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454925.1;locus_tag=C9F07_23325;partial=true;product=DNA polymerase IV;protein_id=TGD52657.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002279.1 1 1085 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002279.1 Genbank region 1 1085 . + . ID=PYKI01002279.1:1..1085;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002279.1 Genbank pseudogene 1 1085 . - . ID=gene-C9F07_22335;Name=C9F07_22335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22335;pseudo=true PYKI01002279.1 Protein Homology CDS 1 1085 . - 1 ID=cds-C9F07_22335;Parent=gene-C9F07_22335;Note=cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium%3B the cellulose biosynthesis genes bcsA%2C bcsB%2C bcsZ and bcsC are constitutively transcribed%2C however%2C cellulose synthesis is dependent on the expression of adrA%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=C9F07_22335;product=cellulose biosynthesis protein BcsC;pseudo=true;transl_table=11 ##sequence-region PYKI01000324.1 1 1084 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000324.1 Genbank region 1 1084 . + . ID=PYKI01000324.1:1..1084;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000324.1 Genbank gene 1 110 . + . ID=gene-C9F07_02245;Name=C9F07_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02245;partial=true;start_range=.,1 PYKI01000324.1 Protein Homology CDS 1 110 . + 2 ID=cds-TGE26877.1;Parent=gene-C9F07_02245;Dbxref=NCBI_GP:TGE26877.1;Name=TGE26877.1;Note=Involved in the tartrate degradation pathway;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457731.1;locus_tag=C9F07_02245;partial=true;product=L(+)-tartrate dehydratase subunit alpha;protein_id=TGE26877.1;start_range=.,1;transl_table=11 PYKI01000324.1 Genbank gene 110 727 . + . ID=gene-C9F07_02250;Name=C9F07_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02250 PYKI01000324.1 Protein Homology CDS 110 727 . + 0 ID=cds-TGE26878.1;Parent=gene-C9F07_02250;Dbxref=NCBI_GP:TGE26878.1;Name=TGE26878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457730.1;locus_tag=C9F07_02250;product=L(+)-tartrate dehydratase subunit beta;protein_id=TGE26878.1;transl_table=11 PYKI01000324.1 Genbank gene 884 1084 . + . ID=gene-C9F07_02255;Name=C9F07_02255;end_range=1084,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02255;partial=true PYKI01000324.1 Protein Homology CDS 884 1084 . + 0 ID=cds-TGE26879.1;Parent=gene-C9F07_02255;Dbxref=NCBI_GP:TGE26879.1;Name=TGE26879.1;end_range=1084,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462263.1;locus_tag=C9F07_02255;partial=true;product=oxaloacetate decarboxylase gamma chain;protein_id=TGE26879.1;transl_table=11 ##sequence-region PYKI01003572.1 1 1083 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003572.1 Genbank region 1 1083 . + . ID=PYKI01003572.1:1..1083;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003572.1 Genbank gene 1 509 . + . ID=gene-C9F07_36060;Name=C9F07_36060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36060;partial=true;start_range=.,1 PYKI01003572.1 Protein Homology CDS 1 509 . + 2 ID=cds-TGD30237.1;Parent=gene-C9F07_36060;Dbxref=NCBI_GP:TGD30237.1;Name=TGD30237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457754.1;locus_tag=C9F07_36060;partial=true;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=TGD30237.1;start_range=.,1;transl_table=11 PYKI01003572.1 Genbank gene 902 1083 . + . ID=gene-C9F07_36065;Name=C9F07_36065;end_range=1083,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36065;partial=true PYKI01003572.1 Protein Homology CDS 902 1083 . + 0 ID=cds-TGD30238.1;Parent=gene-C9F07_36065;Dbxref=NCBI_GP:TGD30238.1;Name=TGD30238.1;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;end_range=1083,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457755.1;locus_tag=C9F07_36065;partial=true;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=TGD30238.1;transl_table=11 ##sequence-region PYKI01000904.1 1 1083 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000904.1 Genbank region 1 1083 . + . ID=PYKI01000904.1:1..1083;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000904.1 Genbank gene 1 210 . + . ID=gene-C9F07_08255;Name=C9F07_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08255;partial=true;start_range=.,1 PYKI01000904.1 Protein Homology CDS 1 210 . + 0 ID=cds-TGE03203.1;Parent=gene-C9F07_08255;Dbxref=NCBI_GP:TGE03203.1;Name=TGE03203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312496.1;locus_tag=C9F07_08255;partial=true;product=glutathione S-transferase;protein_id=TGE03203.1;start_range=.,1;transl_table=11 PYKI01000904.1 Genbank gene 309 1083 . + . ID=gene-C9F07_08260;Name=selA;end_range=1083,.;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=C9F07_08260;partial=true PYKI01000904.1 Protein Homology CDS 309 1083 . + 0 ID=cds-TGE03204.1;Parent=gene-C9F07_08260;Dbxref=NCBI_GP:TGE03204.1;Name=TGE03204.1;end_range=1083,.;gbkey=CDS;gene=selA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458243.1;locus_tag=C9F07_08260;partial=true;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=TGE03204.1;transl_table=11 ##sequence-region PYKI01001182.1 1 1083 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001182.1 Genbank region 1 1083 . + . ID=PYKI01001182.1:1..1083;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001182.1 Genbank gene 1 826 . - . ID=gene-C9F07_11050;Name=C9F07_11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11050;partial=true;start_range=.,1 PYKI01001182.1 Protein Homology CDS 1 826 . - 0 ID=cds-TGD92257.1;Parent=gene-C9F07_11050;Dbxref=NCBI_GP:TGD92257.1;Name=TGD92257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126202.1;locus_tag=C9F07_11050;partial=true;product=3-deoxy-8-phosphooctulonate synthase;protein_id=TGD92257.1;start_range=.,1;transl_table=11 PYKI01001182.1 Genbank gene 864 1083 . - . ID=gene-C9F07_11055;Name=C9F07_11055;end_range=1083,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11055;partial=true PYKI01001182.1 Protein Homology CDS 864 1083 . - 1 ID=cds-TGD92258.1;Parent=gene-C9F07_11055;Dbxref=NCBI_GP:TGD92258.1;Name=TGD92258.1;end_range=1083,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456283.1;locus_tag=C9F07_11055;partial=true;product=hypothetical protein;protein_id=TGD92258.1;transl_table=11 ##sequence-region PYKI01003557.1 1 1081 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003557.1 Genbank region 1 1081 . + . ID=PYKI01003557.1:1..1081;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003557.1 Genbank gene 1 709 . + . ID=gene-C9F07_35915;Name=C9F07_35915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35915;partial=true;start_range=.,1 PYKI01003557.1 Protein Homology CDS 1 709 . + 1 ID=cds-TGD30584.1;Parent=gene-C9F07_35915;Dbxref=NCBI_GP:TGD30584.1;Name=TGD30584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455558.1;locus_tag=C9F07_35915;partial=true;product=hypothetical protein;protein_id=TGD30584.1;start_range=.,1;transl_table=11 PYKI01003557.1 Genbank gene 706 1081 . - . ID=gene-C9F07_35920;Name=zapC;end_range=1081,.;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=C9F07_35920;partial=true PYKI01003557.1 Protein Homology CDS 706 1081 . - 1 ID=cds-TGD30585.1;Parent=gene-C9F07_35920;Dbxref=NCBI_GP:TGD30585.1;Name=TGD30585.1;end_range=1081,.;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455557.1;locus_tag=C9F07_35920;partial=true;product=cell division protein ZapC;protein_id=TGD30585.1;transl_table=11 ##sequence-region PYKI01000963.1 1 1080 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000963.1 Genbank region 1 1080 . + . ID=PYKI01000963.1:1..1080;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000963.1 Genbank pseudogene 1 1024 . + . ID=gene-C9F07_08805;Name=casA;gbkey=Gene;gene=casA;gene_biotype=pseudogene;locus_tag=C9F07_08805;pseudo=true PYKI01000963.1 Protein Homology CDS 1 1024 . + 1 ID=cds-C9F07_08805;Parent=gene-C9F07_08805;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=casA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461864.1;locus_tag=C9F07_08805;product=type I-E CRISPR-associated protein Cse1/CasA;pseudo=true;transl_table=11 ##sequence-region PYKI01001926.1 1 3819 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001926.1 Genbank region 1 3819 . + . ID=PYKI01001926.1:1..3819;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001926.1 Genbank gene 1 281 . - . ID=gene-C9F07_18570;Name=C9F07_18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18570;partial=true;start_range=.,1 PYKI01001926.1 Protein Homology CDS 1 281 . - 0 ID=cds-TGD60915.1;Parent=gene-C9F07_18570;Dbxref=NCBI_GP:TGD60915.1;Name=TGD60915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=C9F07_18570;partial=true;product=formate acetyltransferase;protein_id=TGD60915.1;start_range=.,1;transl_table=11 PYKI01001926.1 Genbank pseudogene 318 1523 . - . ID=gene-C9F07_18575;Name=C9F07_18575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18575;pseudo=true PYKI01001926.1 Protein Homology CDS 318 1523 . - 0 ID=cds-C9F07_18575;Parent=gene-C9F07_18575;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=C9F07_18575;product=propionate kinase;pseudo=true;transl_table=11 PYKI01001926.1 Genbank gene 1590 2921 . - . ID=gene-C9F07_18580;Name=C9F07_18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18580 PYKI01001926.1 Protein Homology CDS 1590 2921 . - 0 ID=cds-TGD60914.1;Parent=gene-C9F07_18580;Dbxref=NCBI_GP:TGD60914.1;Name=TGD60914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=C9F07_18580;product=threonine/serine transporter TdcC;protein_id=TGD60914.1;transl_table=11 PYKI01001926.1 Genbank gene 2942 3819 . - . ID=gene-C9F07_18585;Name=C9F07_18585;end_range=3819,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18585;partial=true PYKI01001926.1 Protein Homology CDS 2942 3819 . - 2 ID=cds-TGD60916.1;Parent=gene-C9F07_18585;Dbxref=NCBI_GP:TGD60916.1;Name=TGD60916.1;end_range=3819,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=C9F07_18585;partial=true;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=TGD60916.1;transl_table=11 ##sequence-region PYKI01000749.1 1 1080 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000749.1 Genbank region 1 1080 . + . ID=PYKI01000749.1:1..1080;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000749.1 Genbank pseudogene 79 1080 . + . ID=gene-C9F07_06615;Name=C9F07_06615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06615;pseudo=true PYKI01000749.1 Protein Homology CDS 79 1080 . + 0 ID=cds-C9F07_06615;Parent=gene-C9F07_06615;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457063.1;locus_tag=C9F07_06615;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001402.1 1 1079 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001402.1 Genbank region 1 1079 . + . ID=PYKI01001402.1:1..1079;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001402.1 Genbank pseudogene 1 122 . + . ID=gene-C9F07_13275;Name=C9F07_13275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13275;pseudo=true PYKI01001402.1 Protein Homology CDS 1 122 . + 2 ID=cds-C9F07_13275;Parent=gene-C9F07_13275;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344107.1;locus_tag=C9F07_13275;product=colicin I receptor;pseudo=true;transl_table=11 PYKI01001402.1 Genbank gene 259 1079 . - . ID=gene-C9F07_13280;Name=C9F07_13280;end_range=1079,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13280;partial=true PYKI01001402.1 Protein Homology CDS 259 1079 . - 2 ID=cds-TGD83967.1;Parent=gene-C9F07_13280;Dbxref=NCBI_GP:TGD83967.1;Name=TGD83967.1;end_range=1079,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456758.1;locus_tag=C9F07_13280;partial=true;product=lysine transporter;protein_id=TGD83967.1;transl_table=11 ##sequence-region PYKI01002247.1 1 1079 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002247.1 Genbank region 1 1079 . + . ID=PYKI01002247.1:1..1079;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002247.1 Genbank gene 1 1079 . + . ID=gene-C9F07_21955;Name=ligA;end_range=1079,.;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=C9F07_21955;partial=true;start_range=.,1 PYKI01002247.1 Protein Homology CDS 1 1079 . + 2 ID=cds-TGD55756.1;Parent=gene-C9F07_21955;Dbxref=NCBI_GP:TGD55756.1;Name=TGD55756.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;end_range=1079,.;gbkey=CDS;gene=ligA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456964.1;locus_tag=C9F07_21955;partial=true;product=DNA ligase;protein_id=TGD55756.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003559.1 1 1076 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003559.1 Genbank region 1 1076 . + . ID=PYKI01003559.1:1..1076;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003559.1 Genbank gene 1 669 . - . ID=gene-C9F07_35945;Name=C9F07_35945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35945;partial=true;start_range=.,1 PYKI01003559.1 Protein Homology CDS 1 669 . - 0 ID=cds-TGD30577.1;Parent=gene-C9F07_35945;Dbxref=NCBI_GP:TGD30577.1;Name=TGD30577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=C9F07_35945;partial=true;product=transcriptional regulator;protein_id=TGD30577.1;start_range=.,1;transl_table=11 PYKI01003559.1 Genbank gene 801 1076 . - . ID=gene-C9F07_35950;Name=C9F07_35950;end_range=1076,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35950;partial=true PYKI01003559.1 Protein Homology CDS 801 1076 . - 0 ID=cds-TGD30578.1;Parent=gene-C9F07_35950;Dbxref=NCBI_GP:TGD30578.1;Name=TGD30578.1;end_range=1076,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457491.1;locus_tag=C9F07_35950;partial=true;product=type IV pili twitching motility protein PilT;protein_id=TGD30578.1;transl_table=11 ##sequence-region PYKI01000088.1 1 1076 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000088.1 Genbank region 1 1076 . + . ID=PYKI01000088.1:1..1076;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000088.1 Genbank gene 67 252 . + . ID=gene-C9F07_00555;Name=C9F07_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00555 PYKI01000088.1 Protein Homology CDS 67 252 . + 0 ID=cds-TGE30146.1;Parent=gene-C9F07_00555;Dbxref=NCBI_GP:TGE30146.1;Name=TGE30146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537452.1;locus_tag=C9F07_00555;product=hypothetical protein;protein_id=TGE30146.1;transl_table=11 PYKI01000088.1 Genbank gene 293 610 . + . ID=gene-C9F07_00560;Name=C9F07_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00560 PYKI01000088.1 Protein Homology CDS 293 610 . + 0 ID=cds-TGE30147.1;Parent=gene-C9F07_00560;Dbxref=NCBI_GP:TGE30147.1;Name=TGE30147.1;Note=positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455043.1;locus_tag=C9F07_00560;product=BolA family transcriptional regulator;protein_id=TGE30147.1;transl_table=11 PYKI01000088.1 Genbank pseudogene 621 809 . + . ID=gene-C9F07_00565;Name=C9F07_00565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00565;pseudo=true PYKI01000088.1 Protein Homology CDS 621 809 . + 0 ID=cds-C9F07_00565;Parent=gene-C9F07_00565;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001177119.1;locus_tag=C9F07_00565;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000088.1 Genbank gene 957 1076 . + . ID=gene-C9F07_00570;Name=C9F07_00570;end_range=1076,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00570;partial=true PYKI01000088.1 Protein Homology CDS 957 1076 . + 0 ID=cds-TGE30148.1;Parent=gene-C9F07_00570;Dbxref=NCBI_GP:TGE30148.1;Name=TGE30148.1;end_range=1076,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308517.1;locus_tag=C9F07_00570;partial=true;product=trigger factor;protein_id=TGE30148.1;transl_table=11 ##sequence-region PYKI01002260.1 1 1076 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002260.1 Genbank region 1 1076 . + . ID=PYKI01002260.1:1..1076;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002260.1 Genbank pseudogene 1 643 . + . ID=gene-C9F07_22115;Name=C9F07_22115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22115;pseudo=true PYKI01002260.1 Protein Homology CDS 1 643 . + 1 ID=cds-C9F07_22115;Parent=gene-C9F07_22115;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=C9F07_22115;product=NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 PYKI01002260.1 Genbank gene 724 1076 . + . ID=gene-C9F07_22120;Name=C9F07_22120;end_range=1076,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22120;partial=true PYKI01002260.1 Protein Homology CDS 724 1076 . + 0 ID=cds-TGD55377.1;Parent=gene-C9F07_22120;Dbxref=NCBI_GP:TGD55377.1;Name=TGD55377.1;end_range=1076,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458836.1;locus_tag=C9F07_22120;partial=true;product=EamA family transporter;protein_id=TGD55377.1;transl_table=11 ##sequence-region PYKI01000081.1 1 1075 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000081.1 Genbank region 1 1075 . + . ID=PYKI01000081.1:1..1075;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000081.1 Genbank gene 1 339 . + . ID=gene-C9F07_00505;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=C9F07_00505;partial=true;start_range=.,1 PYKI01000081.1 Protein Homology CDS 1 339 . + 0 ID=cds-TGE30156.1;Parent=gene-C9F07_00505;Dbxref=NCBI_GP:TGE30156.1;Name=TGE30156.1;gbkey=CDS;gene=ubiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456819.1;locus_tag=C9F07_00505;partial=true;product=3-demethylubiquinone-9 3-O-methyltransferase;protein_id=TGE30156.1;start_range=.,1;transl_table=11 PYKI01000081.1 Genbank gene 695 1075 . + . ID=gene-C9F07_00510;Name=C9F07_00510;end_range=1075,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00510;partial=true PYKI01000081.1 Protein Homology CDS 695 1075 . + 0 ID=cds-TGE30157.1;Parent=gene-C9F07_00510;Dbxref=NCBI_GP:TGE30157.1;Name=TGE30157.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;end_range=1075,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=C9F07_00510;partial=true;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=TGE30157.1;transl_table=11 ##sequence-region PYKI01003155.1 1 1075 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003155.1 Genbank region 1 1075 . + . ID=PYKI01003155.1:1..1075;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003155.1 Genbank gene 1 71 . + . ID=gene-C9F07_31640;Name=C9F07_31640;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_31640 PYKI01003155.1 tRNAscan-SE tRNA 1 71 . + . ID=rna-C9F07_31640;Parent=gene-C9F07_31640;anticodon=(pos:29..31);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_31640;product=tRNA-Arg PYKI01003155.1 tRNAscan-SE exon 1 71 . + . ID=exon-C9F07_31640-1;Parent=rna-C9F07_31640;anticodon=(pos:29..31);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_31640;product=tRNA-Arg PYKI01003155.1 Genbank gene 268 344 . + . ID=gene-C9F07_31645;Name=C9F07_31645;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_31645 PYKI01003155.1 tRNAscan-SE tRNA 268 344 . + . ID=rna-C9F07_31645;Parent=gene-C9F07_31645;anticodon=(pos:302..304);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_31645;product=tRNA-Arg PYKI01003155.1 tRNAscan-SE exon 268 344 . + . ID=exon-C9F07_31645-1;Parent=rna-C9F07_31645;anticodon=(pos:302..304);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_31645;product=tRNA-Arg PYKI01003155.1 Genbank gene 580 1075 . + . ID=gene-C9F07_31650;Name=C9F07_31650;end_range=1075,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31650;partial=true PYKI01003155.1 Protein Homology CDS 580 1075 . + 0 ID=cds-TGD38344.1;Parent=gene-C9F07_31650;Dbxref=NCBI_GP:TGD38344.1;Name=TGD38344.1;end_range=1075,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457218.1;locus_tag=C9F07_31650;partial=true;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=TGD38344.1;transl_table=11 ##sequence-region PYKI01003412.1 1 1075 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003412.1 Genbank region 1 1075 . + . ID=PYKI01003412.1:1..1075;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003412.1 Genbank gene 1 418 . + . ID=gene-C9F07_34300;Name=C9F07_34300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34300;partial=true;start_range=.,1 PYKI01003412.1 Protein Homology CDS 1 418 . + 1 ID=cds-TGD33786.1;Parent=gene-C9F07_34300;Dbxref=NCBI_GP:TGD33786.1;Name=TGD33786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456257.1;locus_tag=C9F07_34300;partial=true;product=cytochrome b;protein_id=TGD33786.1;start_range=.,1;transl_table=11 PYKI01003412.1 Genbank gene 501 1075 . - . ID=gene-C9F07_34305;Name=C9F07_34305;end_range=1075,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34305;partial=true PYKI01003412.1 Protein Homology CDS 501 1075 . - 2 ID=cds-TGD33787.1;Parent=gene-C9F07_34305;Dbxref=NCBI_GP:TGD33787.1;Name=TGD33787.1;end_range=1075,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456258.1;locus_tag=C9F07_34305;partial=true;product=hypothetical protein;protein_id=TGD33787.1;transl_table=11 ##sequence-region PYKI01002640.1 1 3814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002640.1 Genbank region 1 3814 . + . ID=PYKI01002640.1:1..3814;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002640.1 Genbank gene 1 523 . - . ID=gene-C9F07_26290;Name=C9F07_26290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26290;partial=true;start_range=.,1 PYKI01002640.1 Protein Homology CDS 1 523 . - 0 ID=cds-TGD49399.1;Parent=gene-C9F07_26290;Dbxref=NCBI_GP:TGD49399.1;Name=TGD49399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=C9F07_26290;partial=true;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=TGD49399.1;start_range=.,1;transl_table=11 PYKI01002640.1 Genbank gene 538 1428 . - . ID=gene-C9F07_26295;Name=C9F07_26295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26295 PYKI01002640.1 Protein Homology CDS 538 1428 . - 0 ID=cds-TGD49400.1;Parent=gene-C9F07_26295;Dbxref=NCBI_GP:TGD49400.1;Name=TGD49400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=C9F07_26295;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=TGD49400.1;transl_table=11 PYKI01002640.1 Genbank gene 1428 2225 . - . ID=gene-C9F07_26300;Name=C9F07_26300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26300 PYKI01002640.1 Protein Homology CDS 1428 2225 . - 0 ID=cds-TGD49401.1;Parent=gene-C9F07_26300;Dbxref=NCBI_GP:TGD49401.1;Name=TGD49401.1;Note=part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=C9F07_26300;product=iron-hydroxamate transporter ATP-binding subunit;protein_id=TGD49401.1;transl_table=11 PYKI01002640.1 Genbank gene 2274 3814 . - . ID=gene-C9F07_26305;Name=C9F07_26305;end_range=3814,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26305;partial=true PYKI01002640.1 Protein Homology CDS 2274 3814 . - 2 ID=cds-TGD49402.1;Parent=gene-C9F07_26305;Dbxref=NCBI_GP:TGD49402.1;Name=TGD49402.1;end_range=3814,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=C9F07_26305;partial=true;product=ferrichrome porin FhuA;protein_id=TGD49402.1;transl_table=11 ##sequence-region PYKI01002267.1 1 1075 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002267.1 Genbank region 1 1075 . + . ID=PYKI01002267.1:1..1075;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002267.1 Genbank pseudogene 82 513 . + . ID=gene-C9F07_22190;Name=C9F07_22190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22190;pseudo=true PYKI01002267.1 Protein Homology CDS 82 513 . + 0 ID=cds-C9F07_22190;Parent=gene-C9F07_22190;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454804.1;locus_tag=C9F07_22190;product=RNA 2'%2C3'-cyclic phosphodiesterase;pseudo=true;transl_table=11 PYKI01002267.1 Genbank pseudogene 530 1075 . + . ID=gene-C9F07_22195;Name=C9F07_22195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22195;pseudo=true PYKI01002267.1 Protein Homology CDS 530 1075 . + 0 ID=cds-C9F07_22195;Parent=gene-C9F07_22195;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=C9F07_22195;product=DNA/RNA nuclease SfsA;pseudo=true;transl_table=11 ##sequence-region PYKI01001267.1 1 1074 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001267.1 Genbank region 1 1074 . + . ID=PYKI01001267.1:1..1074;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001267.1 Genbank gene 70 669 . + . ID=gene-C9F07_11855;Name=C9F07_11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11855 PYKI01001267.1 Protein Homology CDS 70 669 . + 0 ID=cds-TGD88769.1;Parent=gene-C9F07_11855;Dbxref=NCBI_GP:TGD88769.1;Name=TGD88769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460854.1;locus_tag=C9F07_11855;product=hypothetical protein;protein_id=TGD88769.1;transl_table=11 PYKI01001267.1 Genbank pseudogene 671 1074 . - . ID=gene-C9F07_11860;Name=C9F07_11860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11860;pseudo=true PYKI01001267.1 Protein Homology CDS 671 1074 . - 2 ID=cds-C9F07_11860;Parent=gene-C9F07_11860;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=C9F07_11860;product=crossover junction endodeoxyribonuclease RuvC;pseudo=true;transl_table=11 ##sequence-region PYKI01000437.1 1 1074 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000437.1 Genbank region 1 1074 . + . ID=PYKI01000437.1:1..1074;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000437.1 Genbank gene 1 192 . + . ID=gene-C9F07_03360;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=C9F07_03360;partial=true;start_range=.,1 PYKI01000437.1 Protein Homology CDS 1 192 . + 0 ID=cds-TGE20826.1;Parent=gene-C9F07_03360;Dbxref=NCBI_GP:TGE20826.1;Name=TGE20826.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458081.1;locus_tag=C9F07_03360;partial=true;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase;protein_id=TGE20826.1;start_range=.,1;transl_table=11 PYKI01000437.1 Genbank gene 381 1074 . + . ID=gene-C9F07_03365;Name=C9F07_03365;end_range=1074,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03365;partial=true PYKI01000437.1 Protein Homology CDS 381 1074 . + 0 ID=cds-TGE20827.1;Parent=gene-C9F07_03365;Dbxref=NCBI_GP:TGE20827.1;Name=TGE20827.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;end_range=1074,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=C9F07_03365;partial=true;product=glutamine--fructose-6-phosphate aminotransferase;protein_id=TGE20827.1;transl_table=11 ##sequence-region PYKI01000746.1 1 1071 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000746.1 Genbank region 1 1071 . + . ID=PYKI01000746.1:1..1071;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000746.1 Genbank gene 1 698 . - . ID=gene-C9F07_06585;Name=C9F07_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06585;partial=true;start_range=.,1 PYKI01000746.1 Protein Homology CDS 1 698 . - 0 ID=cds-TGE10740.1;Parent=gene-C9F07_06585;Dbxref=NCBI_GP:TGE10740.1;Name=TGE10740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458044.1;locus_tag=C9F07_06585;partial=true;product=nitrogen regulation protein NR(I);protein_id=TGE10740.1;start_range=.,1;transl_table=11 PYKI01000746.1 Genbank gene 707 1071 . - . ID=gene-C9F07_06590;Name=C9F07_06590;end_range=1071,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06590;partial=true PYKI01000746.1 Protein Homology CDS 707 1071 . - 2 ID=cds-TGE10741.1;Parent=gene-C9F07_06590;Dbxref=NCBI_GP:TGE10741.1;Name=TGE10741.1;end_range=1071,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458043.1;locus_tag=C9F07_06590;partial=true;product=hypothetical protein;protein_id=TGE10741.1;transl_table=11 ##sequence-region PYKI01000574.1 1 1071 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000574.1 Genbank region 1 1071 . + . ID=PYKI01000574.1:1..1071;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000574.1 Genbank pseudogene 1 1071 . + . ID=gene-C9F07_04850;Name=C9F07_04850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04850;pseudo=true PYKI01000574.1 Protein Homology CDS 1 1071 . + 0 ID=cds-C9F07_04850;Parent=gene-C9F07_04850;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457158.1;locus_tag=C9F07_04850;product=large repetitive protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003191.1 1 1071 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003191.1 Genbank region 1 1071 . + . ID=PYKI01003191.1:1..1071;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003191.1 Genbank gene 1 721 . + . ID=gene-C9F07_32030;Name=C9F07_32030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32030;partial=true;start_range=.,1 PYKI01003191.1 Protein Homology CDS 1 721 . + 1 ID=cds-TGD37519.1;Parent=gene-C9F07_32030;Dbxref=NCBI_GP:TGD37519.1;Name=TGD37519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456719.1;locus_tag=C9F07_32030;partial=true;product=sensor histidine kinase;protein_id=TGD37519.1;start_range=.,1;transl_table=11 PYKI01003191.1 Genbank gene 718 1071 . + . ID=gene-C9F07_32035;Name=C9F07_32035;end_range=1071,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32035;partial=true PYKI01003191.1 Protein Homology CDS 718 1071 . + 0 ID=cds-TGD37520.1;Parent=gene-C9F07_32035;Dbxref=NCBI_GP:TGD37520.1;Name=TGD37520.1;Note=unknown function%3B when overproduced it confers drug-resistance;end_range=1071,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=C9F07_32035;partial=true;product=two-component system response regulator YehT;protein_id=TGD37520.1;transl_table=11 ##sequence-region PYKI01001409.1 1 1070 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001409.1 Genbank region 1 1070 . + . ID=PYKI01001409.1:1..1070;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001409.1 Genbank pseudogene 24 110 . + . ID=gene-C9F07_13350;Name=C9F07_13350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13350;pseudo=true PYKI01001409.1 Protein Homology CDS 24 110 . + 0 ID=cds-C9F07_13350;Parent=gene-C9F07_13350;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456779.1;locus_tag=C9F07_13350;product=bicyclomycin resistance protein;pseudo=true;transl_table=11 PYKI01001409.1 Genbank gene 142 336 . + . ID=gene-C9F07_13355;Name=C9F07_13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13355 PYKI01001409.1 Protein Homology CDS 142 336 . + 0 ID=cds-TGD83842.1;Parent=gene-C9F07_13355;Dbxref=NCBI_GP:TGD83842.1;Name=TGD83842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005117972.1;locus_tag=C9F07_13355;product=hypothetical protein;protein_id=TGD83842.1;transl_table=11 PYKI01001409.1 Genbank gene 501 845 . + . ID=gene-C9F07_13360;Name=C9F07_13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13360 PYKI01001409.1 Protein Homology CDS 501 845 . + 0 ID=cds-TGD83843.1;Parent=gene-C9F07_13360;Dbxref=NCBI_GP:TGD83843.1;Name=TGD83843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456777.1;locus_tag=C9F07_13360;product=hypothetical protein;protein_id=TGD83843.1;transl_table=11 PYKI01001409.1 Genbank gene 849 1070 . - . ID=gene-C9F07_13365;Name=C9F07_13365;end_range=1070,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13365;partial=true PYKI01001409.1 Protein Homology CDS 849 1070 . - 0 ID=cds-TGD83844.1;Parent=gene-C9F07_13365;Dbxref=NCBI_GP:TGD83844.1;Name=TGD83844.1;end_range=1070,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456776.1;locus_tag=C9F07_13365;partial=true;product=hypothetical protein;protein_id=TGD83844.1;transl_table=11 ##sequence-region PYKI01002212.1 1 3806 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002212.1 Genbank region 1 3806 . + . ID=PYKI01002212.1:1..3806;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002212.1 Genbank gene 1 1207 . + . ID=gene-C9F07_21550;Name=C9F07_21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21550;partial=true;start_range=.,1 PYKI01002212.1 Protein Homology CDS 1 1207 . + 1 ID=cds-TGD56489.1;Parent=gene-C9F07_21550;Dbxref=NCBI_GP:TGD56489.1;Name=TGD56489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457037.1;locus_tag=C9F07_21550;partial=true;product=exopolyphosphatase;protein_id=TGD56489.1;start_range=.,1;transl_table=11 PYKI01002212.1 Genbank gene 1243 3456 . - . ID=gene-C9F07_21555;Name=C9F07_21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21555 PYKI01002212.1 Protein Homology CDS 1243 3456 . - 0 ID=cds-TGD56490.1;Parent=gene-C9F07_21555;Dbxref=NCBI_GP:TGD56490.1;Name=TGD56490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=C9F07_21555;product=sensor domain-containing phosphodiesterase;protein_id=TGD56490.1;transl_table=11 PYKI01002212.1 Genbank gene 3553 3690 . - . ID=gene-C9F07_21560;Name=C9F07_21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21560 PYKI01002212.1 Protein Homology CDS 3553 3690 . - 0 ID=cds-TGD56491.1;Parent=gene-C9F07_21560;Dbxref=NCBI_GP:TGD56491.1;Name=TGD56491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=C9F07_21560;product=hypothetical protein;protein_id=TGD56491.1;transl_table=11 ##sequence-region PYKI01003528.1 1 1070 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003528.1 Genbank region 1 1070 . + . ID=PYKI01003528.1:1..1070;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003528.1 Genbank gene 1 334 . - . ID=gene-C9F07_35615;Name=C9F07_35615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35615;partial=true;start_range=.,1 PYKI01003528.1 Protein Homology CDS 1 334 . - 0 ID=cds-TGD31365.1;Parent=gene-C9F07_35615;Dbxref=NCBI_GP:TGD31365.1;Name=TGD31365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001638703.1;locus_tag=C9F07_35615;partial=true;product=hypothetical protein;protein_id=TGD31365.1;start_range=.,1;transl_table=11 PYKI01003528.1 Genbank gene 460 1070 . - . ID=gene-C9F07_35620;Name=C9F07_35620;end_range=1070,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35620;partial=true PYKI01003528.1 Protein Homology CDS 460 1070 . - 2 ID=cds-TGD31366.1;Parent=gene-C9F07_35620;Dbxref=NCBI_GP:TGD31366.1;Name=TGD31366.1;end_range=1070,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530840.1;locus_tag=C9F07_35620;partial=true;product=hypothetical protein;protein_id=TGD31366.1;transl_table=11 ##sequence-region PYKI01001741.1 1 1070 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001741.1 Genbank region 1 1070 . + . ID=PYKI01001741.1:1..1070;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001741.1 Genbank gene 1 293 . - . ID=gene-C9F07_16650;Name=C9F07_16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16650;partial=true;start_range=.,1 PYKI01001741.1 Protein Homology CDS 1 293 . - 0 ID=cds-TGD68479.1;Parent=gene-C9F07_16650;Dbxref=NCBI_GP:TGD68479.1;Name=TGD68479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=C9F07_16650;partial=true;product=gluconate permease;protein_id=TGD68479.1;start_range=.,1;transl_table=11 PYKI01001741.1 Genbank pseudogene 355 1050 . - . ID=gene-C9F07_16655;Name=C9F07_16655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16655;pseudo=true PYKI01001741.1 Protein Homology CDS 355 1050 . - 0 ID=cds-C9F07_16655;Parent=gene-C9F07_16655;Note=Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=C9F07_16655;product=gluconate 5-dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01000729.1 1 1068 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000729.1 Genbank region 1 1068 . + . ID=PYKI01000729.1:1..1068;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000729.1 Genbank gene 1 680 . - . ID=gene-C9F07_06395;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=C9F07_06395;partial=true;start_range=.,1 PYKI01000729.1 Protein Homology CDS 1 680 . - 0 ID=cds-TGE10979.1;Parent=gene-C9F07_06395;Dbxref=NCBI_GP:TGE10979.1;Name=TGE10979.1;gbkey=CDS;gene=alr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458545.1;locus_tag=C9F07_06395;partial=true;product=alanine racemase;protein_id=TGE10979.1;start_range=.,1;transl_table=11 PYKI01000729.1 Genbank gene 712 1068 . - . ID=gene-C9F07_06400;Name=C9F07_06400;end_range=1068,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06400;partial=true PYKI01000729.1 Protein Homology CDS 712 1068 . - 0 ID=cds-TGE10978.1;Parent=gene-C9F07_06400;Dbxref=NCBI_GP:TGE10978.1;Name=TGE10978.1;Note=unwinds double stranded DNA;end_range=1068,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458544.1;locus_tag=C9F07_06400;partial=true;product=replicative DNA helicase;protein_id=TGE10978.1;transl_table=11 ##sequence-region PYKI01002153.1 1 1067 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002153.1 Genbank region 1 1067 . + . ID=PYKI01002153.1:1..1067;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002153.1 Genbank gene 1 670 . + . ID=gene-C9F07_20910;Name=C9F07_20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20910;partial=true;start_range=.,1 PYKI01002153.1 Protein Homology CDS 1 670 . + 1 ID=cds-TGD57454.1;Parent=gene-C9F07_20910;Dbxref=NCBI_GP:TGD57454.1;Name=TGD57454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455253.1;locus_tag=C9F07_20910;partial=true;product=LysR family transcriptional regulator;protein_id=TGD57454.1;start_range=.,1;transl_table=11 PYKI01002153.1 Genbank gene 768 1067 . + . ID=gene-C9F07_20915;Name=C9F07_20915;end_range=1067,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20915;partial=true PYKI01002153.1 Protein Homology CDS 768 1067 . + 0 ID=cds-TGD57455.1;Parent=gene-C9F07_20915;Dbxref=NCBI_GP:TGD57455.1;Name=TGD57455.1;Note=catalyzes the oxidation of tricarballylate to cis-aconitate%3B FAD-dependent%3B required for the utilization of tricarballylate as a carbon and energy source by S. enterica;end_range=1067,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455252.1;locus_tag=C9F07_20915;partial=true;product=FAD-binding dehydrogenase;protein_id=TGD57455.1;transl_table=11 ##sequence-region PYKI01001313.1 1 1067 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001313.1 Genbank region 1 1067 . + . ID=PYKI01001313.1:1..1067;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001313.1 Genbank gene 54 809 . - . ID=gene-C9F07_12280;Name=C9F07_12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12280 PYKI01001313.1 Protein Homology CDS 54 809 . - 0 ID=cds-TGD86449.1;Parent=gene-C9F07_12280;Dbxref=NCBI_GP:TGD86449.1;Name=TGD86449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455771.1;locus_tag=C9F07_12280;product=tryptophan synthase subunit alpha;protein_id=TGD86449.1;transl_table=11 PYKI01001313.1 Genbank gene 809 1067 . - . ID=gene-C9F07_12285;Name=C9F07_12285;end_range=1067,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12285;partial=true PYKI01001313.1 Protein Homology CDS 809 1067 . - 1 ID=cds-TGD86450.1;Parent=gene-C9F07_12285;Dbxref=NCBI_GP:TGD86450.1;Name=TGD86450.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;end_range=1067,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016158396.1;locus_tag=C9F07_12285;partial=true;product=tryptophan synthase subunit beta;protein_id=TGD86450.1;transl_table=11 ##sequence-region PYKI01000981.1 1 1065 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000981.1 Genbank region 1 1065 . + . ID=PYKI01000981.1:1..1065;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000981.1 Genbank gene 1 321 . - . ID=gene-C9F07_08935;Name=C9F07_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08935;partial=true;start_range=.,1 PYKI01000981.1 Protein Homology CDS 1 321 . - 0 ID=cds-TGD99591.1;Parent=gene-C9F07_08935;Dbxref=NCBI_GP:TGD99591.1;Name=TGD99591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454741.1;locus_tag=C9F07_08935;partial=true;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=TGD99591.1;start_range=.,1;transl_table=11 PYKI01000981.1 Genbank pseudogene 440 943 . - . ID=gene-C9F07_08940;Name=C9F07_08940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08940;pseudo=true PYKI01000981.1 Protein Homology CDS 440 943 . - 0 ID=cds-C9F07_08940;Parent=gene-C9F07_08940;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=C9F07_08940;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01000112.1 1 1064 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000112.1 Genbank region 1 1064 . + . ID=PYKI01000112.1:1..1064;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000112.1 Genbank gene 1 617 . - . ID=gene-C9F07_00765;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=C9F07_00765;partial=true;start_range=.,1 PYKI01000112.1 Protein Homology CDS 1 617 . - 0 ID=cds-TGE30113.1;Parent=gene-C9F07_00765;Dbxref=NCBI_GP:TGE30113.1;Name=TGE30113.1;gbkey=CDS;gene=atpG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077994.1;locus_tag=C9F07_00765;partial=true;product=ATP synthase F1 subunit gamma;protein_id=TGE30113.1;start_range=.,1;transl_table=11 PYKI01000112.1 Genbank gene 668 1064 . - . ID=gene-C9F07_00770;Name=C9F07_00770;end_range=1064,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00770;partial=true PYKI01000112.1 Protein Homology CDS 668 1064 . - 1 ID=cds-TGE30114.1;Parent=gene-C9F07_00770;Dbxref=NCBI_GP:TGE30114.1;Name=TGE30114.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;end_range=1064,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=C9F07_00770;partial=true;product=F0F1 ATP synthase subunit alpha;protein_id=TGE30114.1;transl_table=11 ##sequence-region PYKI01001874.1 1 1063 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001874.1 Genbank region 1 1063 . + . ID=PYKI01001874.1:1..1063;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001874.1 Genbank gene 685 1063 . - . ID=gene-C9F07_18060;Name=C9F07_18060;end_range=1063,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18060;partial=true PYKI01001874.1 Protein Homology CDS 685 1063 . - 1 ID=cds-TGD62560.1;Parent=gene-C9F07_18060;Dbxref=NCBI_GP:TGD62560.1;Name=TGD62560.1;end_range=1063,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457364.1;locus_tag=C9F07_18060;partial=true;product=hypothetical protein;protein_id=TGD62560.1;transl_table=11 ##sequence-region PYKI01000713.1 1 1061 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000713.1 Genbank region 1 1061 . + . ID=PYKI01000713.1:1..1061;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000713.1 Genbank gene 1 1061 . - . ID=gene-C9F07_06260;Name=C9F07_06260;end_range=1061,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06260;partial=true;start_range=.,1 PYKI01000713.1 Protein Homology CDS 1 1061 . - 1 ID=cds-TGE11294.1;Parent=gene-C9F07_06260;Dbxref=NCBI_GP:TGE11294.1;Name=TGE11294.1;end_range=1061,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456342.1;locus_tag=C9F07_06260;partial=true;product=peptidoglycan synthase;protein_id=TGE11294.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003458.1 1 1059 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003458.1 Genbank region 1 1059 . + . ID=PYKI01003458.1:1..1059;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003458.1 Genbank gene 1 678 . + . ID=gene-C9F07_34765;Name=C9F07_34765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34765;partial=true;start_range=.,1 PYKI01003458.1 Protein Homology CDS 1 678 . + 0 ID=cds-TGD32942.1;Parent=gene-C9F07_34765;Dbxref=NCBI_GP:TGD32942.1;Name=TGD32942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=C9F07_34765;partial=true;product=DeoR family transcriptional regulator;protein_id=TGD32942.1;start_range=.,1;transl_table=11 PYKI01003458.1 Genbank gene 697 1059 . - . ID=gene-C9F07_34770;Name=C9F07_34770;end_range=1059,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34770;partial=true PYKI01003458.1 Protein Homology CDS 697 1059 . - 0 ID=cds-TGD32943.1;Parent=gene-C9F07_34770;Dbxref=NCBI_GP:TGD32943.1;Name=TGD32943.1;end_range=1059,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457309.1;locus_tag=C9F07_34770;partial=true;product=hypothetical protein;protein_id=TGD32943.1;transl_table=11 ##sequence-region PYKI01001792.1 1 3795 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001792.1 Genbank region 1 3795 . + . ID=PYKI01001792.1:1..3795;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001792.1 Genbank pseudogene 1 228 . + . ID=gene-C9F07_17215;Name=C9F07_17215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17215;pseudo=true PYKI01001792.1 Protein Homology CDS 1 228 . + 0 ID=cds-C9F07_17215;Parent=gene-C9F07_17215;Note=peptidase E%3B catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue%3B belongs to peptidase S51 family%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458509.1;locus_tag=C9F07_17215;product=dipeptidase PepE;pseudo=true;transl_table=11 PYKI01001792.1 Genbank pseudogene 228 1598 . - . ID=gene-C9F07_17220;Name=C9F07_17220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17220;pseudo=true PYKI01001792.1 Protein Homology CDS 228 1598 . - 0 ID=cds-C9F07_17220;Parent=gene-C9F07_17220;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=C9F07_17220;product=nitrite reductase (NAD(P)H);pseudo=true;transl_table=11 PYKI01001792.1 Genbank gene 1918 3099 . - . ID=gene-C9F07_17225;Name=C9F07_17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17225 PYKI01001792.1 Protein Homology CDS 1918 3099 . - 0 ID=cds-TGD66655.1;Parent=gene-C9F07_17225;Dbxref=NCBI_GP:TGD66655.1;Name=TGD66655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458429.1;locus_tag=C9F07_17225;product=MFS transporter TsgA;protein_id=TGD66655.1;transl_table=11 PYKI01001792.1 Genbank gene 3376 3795 . + . ID=gene-C9F07_17230;Name=C9F07_17230;end_range=3795,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17230;partial=true PYKI01001792.1 Protein Homology CDS 3376 3795 . + 0 ID=cds-TGD66656.1;Parent=gene-C9F07_17230;Dbxref=NCBI_GP:TGD66656.1;Name=TGD66656.1;end_range=3795,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920493.1;locus_tag=C9F07_17230;partial=true;product=peptidylprolyl isomerase A;protein_id=TGD66656.1;transl_table=11 ##sequence-region PYKI01002331.1 1 1059 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002331.1 Genbank region 1 1059 . + . ID=PYKI01002331.1:1..1059;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002331.1 Genbank gene 1 1059 . + . ID=gene-C9F07_22865;Name=C9F07_22865;end_range=1059,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22865;partial=true;start_range=.,1 PYKI01002331.1 Protein Homology CDS 1 1059 . + 0 ID=cds-TGD53838.1;Parent=gene-C9F07_22865;Dbxref=NCBI_GP:TGD53838.1;Name=TGD53838.1;end_range=1059,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=C9F07_22865;partial=true;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=TGD53838.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001548.1 1 1059 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001548.1 Genbank region 1 1059 . + . ID=PYKI01001548.1:1..1059;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001548.1 Genbank gene 1 257 . + . ID=gene-C9F07_14830;Name=C9F07_14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14830;partial=true;start_range=.,1 PYKI01001548.1 Protein Homology CDS 1 257 . + 2 ID=cds-TGD74933.1;Parent=gene-C9F07_14830;Dbxref=NCBI_GP:TGD74933.1;Name=TGD74933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311459.1;locus_tag=C9F07_14830;partial=true;product=GTPase Era;protein_id=TGD74933.1;start_range=.,1;transl_table=11 PYKI01001548.1 Genbank pseudogene 269 973 . + . ID=gene-C9F07_14835;Name=C9F07_14835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14835;pseudo=true PYKI01001548.1 Protein Homology CDS 269 973 . + 0 ID=cds-C9F07_14835;Parent=gene-C9F07_14835;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457108.1;locus_tag=C9F07_14835;product=DNA repair protein RecO;pseudo=true;transl_table=11 ##sequence-region PYKI01001773.1 1 1058 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001773.1 Genbank region 1 1058 . + . ID=PYKI01001773.1:1..1058;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001773.1 Genbank gene 348 920 . - . ID=gene-C9F07_17035;Name=C9F07_17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17035 PYKI01001773.1 Protein Homology CDS 348 920 . - 0 ID=cds-TGD66963.1;Parent=gene-C9F07_17035;Dbxref=NCBI_GP:TGD66963.1;Name=TGD66963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461699.1;locus_tag=C9F07_17035;product=DNA-invertase Hin;protein_id=TGD66963.1;transl_table=11 ##sequence-region PYKI01002156.1 1 1057 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002156.1 Genbank region 1 1057 . + . ID=PYKI01002156.1:1..1057;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002156.1 Genbank gene 94 987 . + . ID=gene-C9F07_20935;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=C9F07_20935 PYKI01002156.1 Protein Homology CDS 94 987 . + 0 ID=cds-TGD57448.1;Parent=gene-C9F07_20935;Dbxref=NCBI_GP:TGD57448.1;Name=TGD57448.1;gbkey=CDS;gene=murQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457100.1;locus_tag=C9F07_20935;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=TGD57448.1;transl_table=11 ##sequence-region PYKI01003468.1 1 1056 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003468.1 Genbank region 1 1056 . + . ID=PYKI01003468.1:1..1056;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003468.1 Genbank gene 1 315 . - . ID=gene-C9F07_34860;Name=C9F07_34860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34860;partial=true;start_range=.,1 PYKI01003468.1 Protein Homology CDS 1 315 . - 0 ID=cds-TGD32902.1;Parent=gene-C9F07_34860;Dbxref=NCBI_GP:TGD32902.1;Name=TGD32902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455040.1;locus_tag=C9F07_34860;partial=true;product=cytochrome o ubiquinol oxidase subunit II;protein_id=TGD32902.1;start_range=.,1;transl_table=11 PYKI01003468.1 Genbank pseudogene 768 938 . - . ID=gene-C9F07_34865;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=pseudogene;locus_tag=C9F07_34865;pseudo=true PYKI01003468.1 Protein Homology CDS 768 938 . - 0 ID=cds-C9F07_34865;Parent=gene-C9F07_34865;Note=in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=ampG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=C9F07_34865;product=muropeptide transporter AmpG;pseudo=true;transl_table=11 PYKI01003468.1 Genbank pseudogene 954 1056 . - . ID=gene-C9F07_34870;Name=C9F07_34870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34870;pseudo=true PYKI01003468.1 Protein Homology CDS 954 1056 . - 1 ID=cds-C9F07_34870;Parent=gene-C9F07_34870;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_422288.1;locus_tag=C9F07_34870;product=DUF2497 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003563.1 1 994 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003563.1 Genbank region 1 994 . + . ID=PYKI01003563.1:1..994;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003563.1 Genbank gene 1 503 . + . ID=gene-C9F07_35975;Name=C9F07_35975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35975;partial=true;start_range=.,1 PYKI01003563.1 Protein Homology CDS 1 503 . + 2 ID=cds-TGD30467.1;Parent=gene-C9F07_35975;Dbxref=NCBI_GP:TGD30467.1;Name=TGD30467.1;Note=for aaeXAB operon;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457743.1;locus_tag=C9F07_35975;partial=true;product=transcriptional regulator;protein_id=TGD30467.1;start_range=.,1;transl_table=11 PYKI01003563.1 Genbank pseudogene 625 972 . - . ID=gene-C9F07_35980;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=pseudogene;locus_tag=C9F07_35980;pseudo=true PYKI01003563.1 Protein Homology CDS 625 972 . - 0 ID=cds-C9F07_35980;Parent=gene-C9F07_35980;Note=responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=tldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457744.1;locus_tag=C9F07_35980;product=metalloprotease TldD;pseudo=true;transl_table=11 ##sequence-region PYKI01002236.1 1 1055 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002236.1 Genbank region 1 1055 . + . ID=PYKI01002236.1:1..1055;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002236.1 Genbank gene 1 71 . + . ID=gene-C9F07_21815;Name=C9F07_21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21815;partial=true;start_range=.,1 PYKI01002236.1 Protein Homology CDS 1 71 . + 2 ID=cds-TGD55990.1;Parent=gene-C9F07_21815;Dbxref=NCBI_GP:TGD55990.1;Name=TGD55990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=C9F07_21815;partial=true;product=pseudouridine synthase;protein_id=TGD55990.1;start_range=.,1;transl_table=11 PYKI01002236.1 Genbank gene 68 340 . - . ID=gene-C9F07_21820;Name=C9F07_21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21820 PYKI01002236.1 Protein Homology CDS 68 340 . - 0 ID=cds-TGD55989.1;Parent=gene-C9F07_21820;Dbxref=NCBI_GP:TGD55989.1;Name=TGD55989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458513.1;locus_tag=C9F07_21820;product=hypothetical protein;protein_id=TGD55989.1;transl_table=11 PYKI01002236.1 Genbank gene 382 519 . + . ID=gene-C9F07_21825;Name=C9F07_21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21825 PYKI01002236.1 Protein Homology CDS 382 519 . + 0 ID=cds-TGD55991.1;Parent=gene-C9F07_21825;Dbxref=NCBI_GP:TGD55991.1;Name=TGD55991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132517.1;locus_tag=C9F07_21825;product=L-asparaginase;protein_id=TGD55991.1;transl_table=11 PYKI01002236.1 Genbank gene 551 1055 . - . ID=gene-C9F07_21830;Name=C9F07_21830;end_range=1055,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21830;partial=true PYKI01002236.1 Protein Homology CDS 551 1055 . - 1 ID=cds-TGD55992.1;Parent=gene-C9F07_21830;Dbxref=NCBI_GP:TGD55992.1;Name=TGD55992.1;end_range=1055,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458514.1;locus_tag=C9F07_21830;partial=true;product=DeoR/GlpR transcriptional regulator;protein_id=TGD55992.1;transl_table=11 ##sequence-region PYKI01001937.1 1 1055 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001937.1 Genbank region 1 1055 . + . ID=PYKI01001937.1:1..1055;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001937.1 Genbank gene 63 150 . - . ID=gene-C9F07_18680;Name=C9F07_18680;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_18680 PYKI01001937.1 tRNAscan-SE tRNA 63 150 . - . ID=rna-C9F07_18680;Parent=gene-C9F07_18680;anticodon=(pos:complement(114..116));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_18680;product=tRNA-Ser PYKI01001937.1 tRNAscan-SE exon 63 150 . - . ID=exon-C9F07_18680-1;Parent=rna-C9F07_18680;anticodon=(pos:complement(114..116));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_18680;product=tRNA-Ser PYKI01001937.1 Genbank gene 299 976 . - . ID=gene-C9F07_18685;Name=C9F07_18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18685 PYKI01001937.1 Protein Homology CDS 299 976 . - 0 ID=cds-TGD60713.1;Parent=gene-C9F07_18685;Dbxref=NCBI_GP:TGD60713.1;Name=TGD60713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=C9F07_18685;product=amidohydrolase;protein_id=TGD60713.1;transl_table=11 ##sequence-region PYKI01002907.1 1 1055 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002907.1 Genbank region 1 1055 . + . ID=PYKI01002907.1:1..1055;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002907.1 Genbank gene 1 1055 . - . ID=gene-C9F07_29115;Name=pepN;end_range=1055,.;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=C9F07_29115;partial=true;start_range=.,1 PYKI01002907.1 Protein Homology CDS 1 1055 . - 2 ID=cds-TGD43694.1;Parent=gene-C9F07_29115;Dbxref=NCBI_GP:TGD43694.1;Name=TGD43694.1;end_range=1055,.;gbkey=CDS;gene=pepN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=C9F07_29115;partial=true;product=aminopeptidase N;protein_id=TGD43694.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003406.1 1 1054 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003406.1 Genbank region 1 1054 . + . ID=PYKI01003406.1:1..1054;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003406.1 Genbank gene 1 597 . - . ID=gene-C9F07_34235;Name=C9F07_34235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34235;partial=true;start_range=.,1 PYKI01003406.1 Protein Homology CDS 1 597 . - 0 ID=cds-TGD33901.1;Parent=gene-C9F07_34235;Dbxref=NCBI_GP:TGD33901.1;Name=TGD33901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455196.1;locus_tag=C9F07_34235;partial=true;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=TGD33901.1;start_range=.,1;transl_table=11 PYKI01003406.1 Genbank gene 569 1054 . - . ID=gene-C9F07_34240;Name=citX;end_range=1054,.;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=C9F07_34240;partial=true PYKI01003406.1 Protein Homology CDS 569 1054 . - 0 ID=cds-TGD33902.1;Parent=gene-C9F07_34240;Dbxref=NCBI_GP:TGD33902.1;Name=TGD33902.1;end_range=1054,.;gbkey=CDS;gene=citX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455197.2;locus_tag=C9F07_34240;partial=true;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=TGD33902.1;transl_table=11 ##sequence-region PYKI01001929.1 1 3789 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001929.1 Genbank region 1 3789 . + . ID=PYKI01001929.1:1..3789;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001929.1 Genbank gene 1 869 . - . ID=gene-C9F07_18610;Name=C9F07_18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18610;partial=true;start_range=.,1 PYKI01001929.1 Protein Homology CDS 1 869 . - 0 ID=cds-TGD60840.1;Parent=gene-C9F07_18610;Dbxref=NCBI_GP:TGD60840.1;Name=TGD60840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230792.1;locus_tag=C9F07_18610;partial=true;product=type III restriction endonuclease subunit R;protein_id=TGD60840.1;start_range=.,1;transl_table=11 PYKI01001929.1 Genbank gene 872 3703 . - . ID=gene-C9F07_18615;Name=C9F07_18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18615 PYKI01001929.1 Protein Homology CDS 872 3703 . - 0 ID=cds-TGD60841.1;Parent=gene-C9F07_18615;Dbxref=NCBI_GP:TGD60841.1;Name=TGD60841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009617102.1;locus_tag=C9F07_18615;product=site-specific DNA-methyltransferase;protein_id=TGD60841.1;transl_table=11 ##sequence-region PYKI01002411.1 1 1054 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002411.1 Genbank region 1 1054 . + . ID=PYKI01002411.1:1..1054;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002411.1 Genbank gene 1 456 . + . ID=gene-C9F07_23830;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=C9F07_23830;partial=true;start_range=.,1 PYKI01002411.1 Protein Homology CDS 1 456 . + 0 ID=cds-TGD51690.1;Parent=gene-C9F07_23830;Dbxref=NCBI_GP:TGD51690.1;Name=TGD51690.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=C9F07_23830;partial=true;product=transcription termination/antitermination protein NusG;protein_id=TGD51690.1;start_range=.,1;transl_table=11 PYKI01002411.1 Genbank gene 614 1054 . + . ID=gene-C9F07_23835;Name=rplK;end_range=1054,.;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=C9F07_23835;partial=true PYKI01002411.1 Protein Homology CDS 614 1054 . + 0 ID=cds-TGD51691.1;Parent=gene-C9F07_23835;Dbxref=NCBI_GP:TGD51691.1;Name=TGD51691.1;end_range=1054,.;gbkey=CDS;gene=rplK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312933.1;locus_tag=C9F07_23835;partial=true;product=50S ribosomal protein L11;protein_id=TGD51691.1;transl_table=11 ##sequence-region PYKI01001221.1 1 1054 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001221.1 Genbank region 1 1054 . + . ID=PYKI01001221.1:1..1054;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001221.1 Genbank gene 1 348 . + . ID=gene-C9F07_11430;Name=C9F07_11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11430;partial=true;start_range=.,1 PYKI01001221.1 Protein Homology CDS 1 348 . + 0 ID=cds-TGD91153.1;Parent=gene-C9F07_11430;Dbxref=NCBI_GP:TGD91153.1;Name=TGD91153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454931.1;locus_tag=C9F07_11430;partial=true;product=sigma factor-binding protein Crl;protein_id=TGD91153.1;start_range=.,1;transl_table=11 PYKI01001221.1 Genbank gene 399 1054 . - . ID=gene-C9F07_11435;Name=C9F07_11435;end_range=1054,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11435;partial=true PYKI01001221.1 Protein Homology CDS 399 1054 . - 2 ID=cds-TGD91154.1;Parent=gene-C9F07_11435;Dbxref=NCBI_GP:TGD91154.1;Name=TGD91154.1;end_range=1054,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454932.1;locus_tag=C9F07_11435;partial=true;product=phosphoporin PhoE;protein_id=TGD91154.1;transl_table=11 ##sequence-region PYKI01002874.1 1 1053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002874.1 Genbank region 1 1053 . + . ID=PYKI01002874.1:1..1053;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002874.1 Genbank gene 1 654 . + . ID=gene-C9F07_28790;Name=C9F07_28790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28790;partial=true;start_range=.,1 PYKI01002874.1 Protein Homology CDS 1 654 . + 0 ID=cds-TGD44491.1;Parent=gene-C9F07_28790;Dbxref=NCBI_GP:TGD44491.1;Name=TGD44491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455561.1;locus_tag=C9F07_28790;partial=true;product=paraquat-inducible protein A;protein_id=TGD44491.1;start_range=.,1;transl_table=11 PYKI01002874.1 Genbank gene 659 1053 . + . ID=gene-C9F07_28795;Name=C9F07_28795;end_range=1053,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28795;partial=true PYKI01002874.1 Protein Homology CDS 659 1053 . + 0 ID=cds-TGD44492.1;Parent=gene-C9F07_28795;Dbxref=NCBI_GP:TGD44492.1;Name=TGD44492.1;end_range=1053,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455562.1;locus_tag=C9F07_28795;partial=true;product=paraquat-inducible protein B;protein_id=TGD44492.1;transl_table=11 ##sequence-region PYKI01001296.1 1 1053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001296.1 Genbank region 1 1053 . + . ID=PYKI01001296.1:1..1053;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001296.1 Genbank gene 1 156 . + . ID=gene-C9F07_12140;Name=C9F07_12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12140;partial=true;start_range=.,1 PYKI01001296.1 Protein Homology CDS 1 156 . + 0 ID=cds-TGD87225.1;Parent=gene-C9F07_12140;Dbxref=NCBI_GP:TGD87225.1;Name=TGD87225.1;Note=affects solute and DNA transport through an unknown mechanism;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456351.1;locus_tag=C9F07_12140;partial=true;product=RNA chaperone ProQ;protein_id=TGD87225.1;start_range=.,1;transl_table=11 PYKI01001296.1 Genbank pseudogene 176 1053 . + . ID=gene-C9F07_12145;Name=C9F07_12145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12145;pseudo=true PYKI01001296.1 Protein Homology CDS 176 1053 . + 0 ID=cds-C9F07_12145;Parent=gene-C9F07_12145;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456350.1;locus_tag=C9F07_12145;product=tail-specific protease;pseudo=true;transl_table=11 ##sequence-region PYKI01002004.1 1 1053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002004.1 Genbank region 1 1053 . + . ID=PYKI01002004.1:1..1053;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002004.1 Genbank gene 1 385 . + . ID=gene-C9F07_19325;Name=C9F07_19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19325;partial=true;start_range=.,1 PYKI01002004.1 Protein Homology CDS 1 385 . + 1 ID=cds-TGD60138.1;Parent=gene-C9F07_19325;Dbxref=NCBI_GP:TGD60138.1;Name=TGD60138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=C9F07_19325;partial=true;product=acetylglutamate kinase;protein_id=TGD60138.1;start_range=.,1;transl_table=11 PYKI01002004.1 Genbank gene 503 1053 . + . ID=gene-C9F07_19330;Name=C9F07_19330;end_range=1053,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19330;partial=true PYKI01002004.1 Protein Homology CDS 503 1053 . + 0 ID=cds-TGD60139.1;Parent=gene-C9F07_19330;Dbxref=NCBI_GP:TGD60139.1;Name=TGD60139.1;end_range=1053,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=C9F07_19330;partial=true;product=argininosuccinate lyase;protein_id=TGD60139.1;transl_table=11 ##sequence-region PYKI01002567.1 1 1052 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002567.1 Genbank region 1 1052 . + . ID=PYKI01002567.1:1..1052;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002567.1 Genbank pseudogene 1 1052 . - . ID=gene-C9F07_25485;Name=C9F07_25485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25485;pseudo=true PYKI01002567.1 Protein Homology CDS 1 1052 . - 2 ID=cds-C9F07_25485;Parent=gene-C9F07_25485;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455618.1;locus_tag=C9F07_25485;product=delta-1-pyrroline-5-carboxylate dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01002221.1 1 1052 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002221.1 Genbank region 1 1052 . + . ID=PYKI01002221.1:1..1052;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002221.1 Genbank gene 1 907 . - . ID=gene-C9F07_21655;Name=C9F07_21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21655;partial=true;start_range=.,1 PYKI01002221.1 Protein Homology CDS 1 907 . - 0 ID=cds-TGD56464.1;Parent=gene-C9F07_21655;Dbxref=NCBI_GP:TGD56464.1;Name=TGD56464.1;Note=regulates malXY which are involved in maltose-glucose transport;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310355.1;locus_tag=C9F07_21655;partial=true;product=Mal regulon transcriptional regulator MalI;protein_id=TGD56464.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000108.1 1 1050 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000108.1 Genbank region 1 1050 . + . ID=PYKI01000108.1:1..1050;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000108.1 Genbank gene 1 439 . + . ID=gene-C9F07_00675;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=C9F07_00675;partial=true;start_range=.,1 PYKI01000108.1 Protein Homology CDS 1 439 . + 1 ID=cds-TGE30130.1;Parent=gene-C9F07_00675;Dbxref=NCBI_GP:TGE30130.1;Name=TGE30130.1;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;gbkey=CDS;gene=miaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=C9F07_00675;partial=true;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=TGE30130.1;start_range=.,1;transl_table=11 PYKI01000108.1 Genbank gene 522 830 . + . ID=gene-C9F07_00680;Name=C9F07_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00680 PYKI01000108.1 Protein Homology CDS 522 830 . + 0 ID=cds-TGE30131.1;Parent=gene-C9F07_00680;Dbxref=NCBI_GP:TGE30131.1;Name=TGE30131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458797.1;locus_tag=C9F07_00680;product=RNA-binding protein Hfq;protein_id=TGE30131.1;transl_table=11 ##sequence-region PYKI01001032.1 1 1049 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001032.1 Genbank region 1 1049 . + . ID=PYKI01001032.1:1..1049;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001032.1 Genbank gene 1 647 . + . ID=gene-C9F07_09520;Name=C9F07_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09520;partial=true;start_range=.,1 PYKI01001032.1 Protein Homology CDS 1 647 . + 2 ID=cds-TGD97050.1;Parent=gene-C9F07_09520;Dbxref=NCBI_GP:TGD97050.1;Name=TGD97050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=C9F07_09520;partial=true;product=peptidoglycan editing factor PgeF;protein_id=TGD97050.1;start_range=.,1;transl_table=11 PYKI01001032.1 Genbank gene 777 1049 . + . ID=gene-C9F07_09525;Name=C9F07_09525;end_range=1049,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09525;partial=true PYKI01001032.1 Protein Homology CDS 777 1049 . + 0 ID=cds-TGD97051.1;Parent=gene-C9F07_09525;Dbxref=NCBI_GP:TGD97051.1;Name=TGD97051.1;end_range=1049,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=C9F07_09525;partial=true;product=Clp protease ClpB;protein_id=TGD97051.1;transl_table=11 ##sequence-region PYKI01002500.1 1 1049 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002500.1 Genbank region 1 1049 . + . ID=PYKI01002500.1:1..1049;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002500.1 Genbank gene 1 812 . + . ID=gene-C9F07_24735;Name=C9F07_24735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24735;partial=true;start_range=.,1 PYKI01002500.1 Protein Homology CDS 1 812 . + 2 ID=cds-TGD50281.1;Parent=gene-C9F07_24735;Dbxref=NCBI_GP:TGD50281.1;Name=TGD50281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=C9F07_24735;partial=true;product=malate dehydrogenase;protein_id=TGD50281.1;start_range=.,1;transl_table=11 PYKI01002500.1 Genbank gene 932 1049 . + . ID=gene-C9F07_24740;Name=C9F07_24740;end_range=1049,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24740;partial=true PYKI01002500.1 Protein Homology CDS 932 1049 . + 0 ID=cds-TGD50282.1;Parent=gene-C9F07_24740;Dbxref=NCBI_GP:TGD50282.1;Name=TGD50282.1;end_range=1049,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=C9F07_24740;partial=true;product=GntR family transcriptional regulator;protein_id=TGD50282.1;transl_table=11 ##sequence-region PYKI01001931.1 1 3785 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001931.1 Genbank region 1 3785 . + . ID=PYKI01001931.1:1..3785;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001931.1 Genbank pseudogene 41 1168 . - . ID=gene-C9F07_18625;Name=C9F07_18625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18625;pseudo=true PYKI01001931.1 Protein Homology CDS 41 1168 . - 0 ID=cds-C9F07_18625;Parent=gene-C9F07_18625;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=C9F07_18625;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 PYKI01001931.1 Genbank gene 1181 3289 . - . ID=gene-C9F07_18630;Name=C9F07_18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18630 PYKI01001931.1 Protein Homology CDS 1181 3289 . - 0 ID=cds-TGD60807.1;Parent=gene-C9F07_18630;Dbxref=NCBI_GP:TGD60807.1;Name=TGD60807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=C9F07_18630;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=TGD60807.1;transl_table=11 PYKI01001931.1 Genbank pseudogene 3388 3785 . + . ID=gene-C9F07_18635;Name=C9F07_18635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18635;pseudo=true PYKI01001931.1 Protein Homology CDS 3388 3785 . + 0 ID=cds-C9F07_18635;Parent=gene-C9F07_18635;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=C9F07_18635;product=MOSC domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000328.1 1 7714 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000328.1 Genbank region 1 7714 . + . ID=PYKI01000328.1:1..7714;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000328.1 Genbank gene 28 882 . + . ID=gene-C9F07_02305;Name=C9F07_02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02305 PYKI01000328.1 Protein Homology CDS 28 882 . + 0 ID=cds-TGE26870.1;Parent=gene-C9F07_02305;Dbxref=NCBI_GP:TGE26870.1;Name=TGE26870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000185811.1;locus_tag=C9F07_02305;product=transcriptional regulator HilD;protein_id=TGE26870.1;transl_table=11 PYKI01000328.1 Genbank gene 1970 3631 . + . ID=gene-C9F07_02310;Name=C9F07_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02310 PYKI01000328.1 Protein Homology CDS 1970 3631 . + 0 ID=cds-TGE26863.1;Parent=gene-C9F07_02310;Dbxref=NCBI_GP:TGE26863.1;Name=TGE26863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=C9F07_02310;product=transcriptional regulator HilA;protein_id=TGE26863.1;transl_table=11 PYKI01000328.1 Genbank gene 3649 4131 . + . ID=gene-C9F07_02315;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=C9F07_02315 PYKI01000328.1 Protein Homology CDS 3649 4131 . + 0 ID=cds-TGE26864.1;Parent=gene-C9F07_02315;Dbxref=NCBI_GP:TGE26864.1;Name=TGE26864.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=C9F07_02315;product=SPI-1 type III secretion system invasion protein IagB;protein_id=TGE26864.1;transl_table=11 PYKI01000328.1 Genbank gene 4185 5816 . - . ID=gene-C9F07_02320;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=C9F07_02320 PYKI01000328.1 Protein Homology CDS 4185 5816 . - 0 ID=cds-TGE26865.1;Parent=gene-C9F07_02320;Dbxref=NCBI_GP:TGE26865.1;Name=TGE26865.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=C9F07_02320;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=TGE26865.1;transl_table=11 PYKI01000328.1 Genbank gene 5803 6195 . - . ID=gene-C9F07_02325;Name=C9F07_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02325 PYKI01000328.1 Protein Homology CDS 5803 6195 . - 0 ID=cds-TGE26866.1;Parent=gene-C9F07_02325;Dbxref=NCBI_GP:TGE26866.1;Name=TGE26866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=C9F07_02325;product=chaperone SicP;protein_id=TGE26866.1;transl_table=11 PYKI01000328.1 Genbank gene 6222 6482 . - . ID=gene-C9F07_02330;Name=C9F07_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02330 PYKI01000328.1 Protein Homology CDS 6222 6482 . - 0 ID=cds-TGE26867.1;Parent=gene-C9F07_02330;Dbxref=NCBI_GP:TGE26867.1;Name=TGE26867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=C9F07_02330;product=hypothetical protein;protein_id=TGE26867.1;transl_table=11 PYKI01000328.1 Genbank gene 6526 6774 . - . ID=gene-C9F07_02335;Name=iacP;gbkey=Gene;gene=iacP;gene_biotype=protein_coding;gene_synonym=sipF;locus_tag=C9F07_02335 PYKI01000328.1 Protein Homology CDS 6526 6774 . - 0 ID=cds-TGE26868.1;Parent=gene-C9F07_02335;Dbxref=NCBI_GP:TGE26868.1;Name=TGE26868.1;Note=invasion-associated ACP%3B carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;gene=iacP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457275.1;locus_tag=C9F07_02335;product=acyl carrier protein;protein_id=TGE26868.1;transl_table=11 PYKI01000328.1 Genbank gene 6793 7714 . - . ID=gene-C9F07_02340;Name=sipA;end_range=7714,.;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=C9F07_02340;partial=true PYKI01000328.1 Protein Homology CDS 6793 7714 . - 1 ID=cds-TGE26869.1;Parent=gene-C9F07_02340;Dbxref=NCBI_GP:TGE26869.1;Name=TGE26869.1;end_range=7714,.;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=C9F07_02340;partial=true;product=SPI-1 type III secretion system effector SipA;protein_id=TGE26869.1;transl_table=11 ##sequence-region PYKI01001191.1 1 1049 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001191.1 Genbank region 1 1049 . + . ID=PYKI01001191.1:1..1049;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001191.1 Genbank gene 38 589 . + . ID=gene-C9F07_11140;Name=C9F07_11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11140 PYKI01001191.1 Protein Homology CDS 38 589 . + 0 ID=cds-TGD91919.1;Parent=gene-C9F07_11140;Dbxref=NCBI_GP:TGD91919.1;Name=TGD91919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456927.1;locus_tag=C9F07_11140;product=endonuclease SmrB;protein_id=TGD91919.1;transl_table=11 PYKI01001191.1 Genbank pseudogene 689 976 . - . ID=gene-C9F07_11145;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=pseudogene;locus_tag=C9F07_11145;pseudo=true PYKI01001191.1 Protein Homology CDS 689 976 . - 0 ID=cds-C9F07_11145;Parent=gene-C9F07_11145;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=sixA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=C9F07_11145;product=phosphohistidine phosphatase SixA;pseudo=true;transl_table=11 ##sequence-region PYKI01002492.1 1 1048 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002492.1 Genbank region 1 1048 . + . ID=PYKI01002492.1:1..1048;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002492.1 Genbank gene 42 1048 . + . ID=gene-C9F07_24660;Name=C9F07_24660;end_range=1048,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24660;partial=true PYKI01002492.1 Protein Homology CDS 42 1048 . + 0 ID=cds-TGD50356.1;Parent=gene-C9F07_24660;Dbxref=NCBI_GP:TGD50356.1;Name=TGD50356.1;end_range=1048,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456355.1;locus_tag=C9F07_24660;partial=true;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=TGD50356.1;transl_table=11 ##sequence-region PYKI01003272.1 1 1044 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003272.1 Genbank region 1 1044 . + . ID=PYKI01003272.1:1..1044;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003272.1 Genbank pseudogene 1 982 . + . ID=gene-C9F07_32925;Name=C9F07_32925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32925;pseudo=true PYKI01003272.1 Protein Homology CDS 1 982 . + 1 ID=cds-C9F07_32925;Parent=gene-C9F07_32925;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456817.1;locus_tag=C9F07_32925;product=DNA gyrase subunit A;pseudo=true;transl_table=11 ##sequence-region PYKI01001783.1 1 1044 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001783.1 Genbank region 1 1044 . + . ID=PYKI01001783.1:1..1044;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001783.1 Genbank gene 50 976 . - . ID=gene-C9F07_17140;Name=C9F07_17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17140 PYKI01001783.1 Protein Homology CDS 50 976 . - 0 ID=cds-TGD66820.1;Parent=gene-C9F07_17140;Dbxref=NCBI_GP:TGD66820.1;Name=TGD66820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=C9F07_17140;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=TGD66820.1;transl_table=11 ##sequence-region PYKI01002329.1 1 1043 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002329.1 Genbank region 1 1043 . + . ID=PYKI01002329.1:1..1043;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002329.1 Genbank gene 1 329 . - . ID=gene-C9F07_22840;Name=C9F07_22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22840;partial=true;start_range=.,1 PYKI01002329.1 Protein Homology CDS 1 329 . - 0 ID=cds-TGD53844.1;Parent=gene-C9F07_22840;Dbxref=NCBI_GP:TGD53844.1;Name=TGD53844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458615.1;locus_tag=C9F07_22840;partial=true;product=non-specific acid phosphatase;protein_id=TGD53844.1;start_range=.,1;transl_table=11 PYKI01002329.1 Genbank pseudogene 886 960 . + . ID=gene-C9F07_22845;Name=C9F07_22845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22845;pseudo=true PYKI01002329.1 Protein Homology CDS 886 960 . + 0 ID=cds-C9F07_22845;Parent=gene-C9F07_22845;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003842122.1;locus_tag=C9F07_22845;product=DNA-binding protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003028.1 1 1043 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003028.1 Genbank region 1 1043 . + . ID=PYKI01003028.1:1..1043;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003028.1 Genbank pseudogene 29 124 . - . ID=gene-C9F07_30395;Name=C9F07_30395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30395;pseudo=true PYKI01003028.1 Protein Homology CDS 29 124 . - 0 ID=cds-C9F07_30395;Parent=gene-C9F07_30395;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999321.1;locus_tag=C9F07_30395;product=ferrichrome ABC transporter ATP-binding protein;pseudo=true;transl_table=11 PYKI01003028.1 Genbank gene 150 329 . + . ID=gene-C9F07_30400;Name=C9F07_30400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30400 PYKI01003028.1 Protein Homology CDS 150 329 . + 0 ID=cds-TGD41093.1;Parent=gene-C9F07_30400;Dbxref=NCBI_GP:TGD41093.1;Name=TGD41093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682188.1;locus_tag=C9F07_30400;product=hypothetical protein;protein_id=TGD41093.1;transl_table=11 PYKI01003028.1 Genbank gene 720 1043 . - . ID=gene-C9F07_30405;Name=C9F07_30405;end_range=1043,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30405;partial=true PYKI01003028.1 Protein Homology CDS 720 1043 . - 0 ID=cds-TGD41094.1;Parent=gene-C9F07_30405;Dbxref=NCBI_GP:TGD41094.1;Name=TGD41094.1;end_range=1043,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458607.1;locus_tag=C9F07_30405;partial=true;product=hypothetical protein;protein_id=TGD41094.1;transl_table=11 ##sequence-region PYKI01001131.1 1 1042 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001131.1 Genbank region 1 1042 . + . ID=PYKI01001131.1:1..1042;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001131.1 Genbank gene 78 1042 . + . ID=gene-C9F07_10550;Name=C9F07_10550;end_range=1042,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10550;partial=true PYKI01001131.1 Protein Homology CDS 78 1042 . + 0 ID=cds-TGD94690.1;Parent=gene-C9F07_10550;Dbxref=NCBI_GP:TGD94690.1;Name=TGD94690.1;end_range=1042,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=C9F07_10550;partial=true;product=rod shape-determining protein;protein_id=TGD94690.1;transl_table=11 ##sequence-region PYKI01002957.1 1 1042 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002957.1 Genbank region 1 1042 . + . ID=PYKI01002957.1:1..1042;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002957.1 Genbank gene 16 1042 . + . ID=gene-C9F07_29635;Name=nhaB;end_range=1042,.;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=C9F07_29635;partial=true PYKI01002957.1 Protein Homology CDS 16 1042 . + 0 ID=cds-TGD41990.1;Parent=gene-C9F07_29635;Dbxref=NCBI_GP:TGD41990.1;Name=TGD41990.1;Note=involved in regulation of intracellular pH under alkaline conditions;end_range=1042,.;gbkey=CDS;gene=nhaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015690708.1;locus_tag=C9F07_29635;partial=true;product=sodium/proton antiporter;protein_id=TGD41990.1;transl_table=11 ##sequence-region PYKI01002363.1 1 1039 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002363.1 Genbank region 1 1039 . + . ID=PYKI01002363.1:1..1039;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002363.1 Genbank gene 101 1039 . - . ID=gene-C9F07_23225;Name=C9F07_23225;end_range=1039,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23225;partial=true PYKI01002363.1 Protein Homology CDS 101 1039 . - 0 ID=cds-TGD52952.1;Parent=gene-C9F07_23225;Dbxref=NCBI_GP:TGD52952.1;Name=TGD52952.1;end_range=1039,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=C9F07_23225;partial=true;product=MFS transporter;protein_id=TGD52952.1;transl_table=11 ##sequence-region PYKI01002234.1 1 1039 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002234.1 Genbank region 1 1039 . + . ID=PYKI01002234.1:1..1039;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002234.1 Genbank gene 351 851 . - . ID=gene-C9F07_21800;Name=C9F07_21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21800 PYKI01002234.1 Protein Homology CDS 351 851 . - 0 ID=cds-TGD55995.1;Parent=gene-C9F07_21800;Dbxref=NCBI_GP:TGD55995.1;Name=TGD55995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457221.1;locus_tag=C9F07_21800;product=regulatory protein RecX;protein_id=TGD55995.1;transl_table=11 PYKI01002234.1 Genbank gene 968 1039 . - . ID=gene-C9F07_21805;Name=C9F07_21805;end_range=1039,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21805;partial=true PYKI01002234.1 Protein Homology CDS 968 1039 . - 0 ID=cds-TGD55996.1;Parent=gene-C9F07_21805;Dbxref=NCBI_GP:TGD55996.1;Name=TGD55996.1;end_range=1039,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457222.1;locus_tag=C9F07_21805;partial=true;product=recombinase RecA;protein_id=TGD55996.1;transl_table=11 ##sequence-region PYKI01002840.1 1 1039 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002840.1 Genbank region 1 1039 . + . ID=PYKI01002840.1:1..1039;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002840.1 Genbank gene 1 522 . + . ID=gene-C9F07_28395;Name=C9F07_28395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28395;partial=true;start_range=.,1 PYKI01002840.1 Protein Homology CDS 1 522 . + 0 ID=cds-TGD45569.1;Parent=gene-C9F07_28395;Dbxref=NCBI_GP:TGD45569.1;Name=TGD45569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458405.1;locus_tag=C9F07_28395;partial=true;product=DUF4153 domain-containing protein;protein_id=TGD45569.1;start_range=.,1;transl_table=11 PYKI01002840.1 Genbank gene 633 1039 . - . ID=gene-C9F07_28400;Name=C9F07_28400;end_range=1039,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28400;partial=true PYKI01002840.1 Protein Homology CDS 633 1039 . - 2 ID=cds-TGD45570.1;Parent=gene-C9F07_28400;Dbxref=NCBI_GP:TGD45570.1;Name=TGD45570.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;end_range=1039,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458406.1;locus_tag=C9F07_28400;partial=true;product=redox-regulated molecular chaperone Hsp33;protein_id=TGD45570.1;transl_table=11 ##sequence-region PYKI01001430.1 1 1036 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001430.1 Genbank region 1 1036 . + . ID=PYKI01001430.1:1..1036;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001430.1 Genbank gene 19 1036 . + . ID=gene-C9F07_13550;Name=C9F07_13550;end_range=1036,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13550;partial=true PYKI01001430.1 Protein Homology CDS 19 1036 . + 0 ID=cds-TGD83711.1;Parent=gene-C9F07_13550;Dbxref=NCBI_GP:TGD83711.1;Name=TGD83711.1;end_range=1036,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000897119.1;locus_tag=C9F07_13550;partial=true;product=hypothetical protein;protein_id=TGD83711.1;transl_table=11 ##sequence-region PYKI01001612.1 1 1035 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001612.1 Genbank region 1 1035 . + . ID=PYKI01001612.1:1..1035;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001612.1 Genbank pseudogene 292 993 . - . ID=gene-C9F07_15365;Name=pat;gbkey=Gene;gene=pat;gene_biotype=pseudogene;locus_tag=C9F07_15365;pseudo=true PYKI01001612.1 Protein Homology CDS 292 993 . - 0 ID=cds-C9F07_15365;Parent=gene-C9F07_15365;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=C9F07_15365;product=protein lysine acetyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01001175.1 1 1032 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001175.1 Genbank region 1 1032 . + . ID=PYKI01001175.1:1..1032;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001175.1 Genbank pseudogene 1 288 . + . ID=gene-C9F07_10975;Name=C9F07_10975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10975;pseudo=true PYKI01001175.1 Protein Homology CDS 1 288 . + 0 ID=cds-C9F07_10975;Parent=gene-C9F07_10975;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457192.1;locus_tag=C9F07_10975;product=GABA permease;pseudo=true;transl_table=11 PYKI01001175.1 Genbank gene 330 1007 . + . ID=gene-C9F07_10980;Name=C9F07_10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10980 PYKI01001175.1 Protein Homology CDS 330 1007 . + 0 ID=cds-TGD92734.1;Parent=gene-C9F07_10980;Dbxref=NCBI_GP:TGD92734.1;Name=TGD92734.1;Note=regulator of gab gene expression;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457193.1;locus_tag=C9F07_10980;product=DNA-binding transcriptional regulator CsiR;protein_id=TGD92734.1;transl_table=11 ##sequence-region PYKI01002200.1 1 1032 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002200.1 Genbank region 1 1032 . + . ID=PYKI01002200.1:1..1032;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002200.1 Genbank gene 347 835 . - . ID=gene-C9F07_21410;Name=C9F07_21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21410 PYKI01002200.1 Protein Homology CDS 347 835 . - 0 ID=cds-TGD56534.1;Parent=gene-C9F07_21410;Dbxref=NCBI_GP:TGD56534.1;Name=TGD56534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458890.1;locus_tag=C9F07_21410;product=DUF3617 domain-containing protein;protein_id=TGD56534.1;transl_table=11 PYKI01002200.1 Genbank gene 942 1032 . - . ID=gene-C9F07_21415;Name=C9F07_21415;end_range=1032,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21415;partial=true PYKI01002200.1 Protein Homology CDS 942 1032 . - 1 ID=cds-TGD56535.1;Parent=gene-C9F07_21415;Dbxref=NCBI_GP:TGD56535.1;Name=TGD56535.1;end_range=1032,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458891.1;locus_tag=C9F07_21415;partial=true;product=GNAT family N-acetyltransferase;protein_id=TGD56535.1;transl_table=11 ##sequence-region PYKI01001551.1 1 972 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001551.1 Genbank region 1 972 . + . ID=PYKI01001551.1:1..972;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001551.1 Genbank gene 92 700 . - . ID=gene-C9F07_14875;Name=C9F07_14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14875 PYKI01001551.1 Protein Homology CDS 92 700 . - 0 ID=cds-TGD74490.1;Parent=gene-C9F07_14875;Dbxref=NCBI_GP:TGD74490.1;Name=TGD74490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000745165.1;locus_tag=C9F07_14875;product=fimbrial protein;protein_id=TGD74490.1;transl_table=11 PYKI01001551.1 Genbank gene 715 972 . - . ID=gene-C9F07_14880;Name=C9F07_14880;end_range=972,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14880;partial=true PYKI01001551.1 Protein Homology CDS 715 972 . - 0 ID=cds-TGD74491.1;Parent=gene-C9F07_14880;Dbxref=NCBI_GP:TGD74491.1;Name=TGD74491.1;end_range=972,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454795.1;locus_tag=C9F07_14880;partial=true;product=fimbrial protein;protein_id=TGD74491.1;transl_table=11 ##sequence-region PYKI01003256.1 1 1030 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003256.1 Genbank region 1 1030 . + . ID=PYKI01003256.1:1..1030;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003256.1 Genbank direct_repeat 35 307 . + . ID=id-PYKI01003256.1:35..307;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2,COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=96..124;rpt_unit_seq=cggtttatccccgctggcgcggggaacac PYKI01003256.1 Genbank gene 604 1030 . - . ID=gene-C9F07_32750;Name=C9F07_32750;end_range=1030,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32750;partial=true PYKI01003256.1 Protein Homology CDS 604 1030 . - 1 ID=cds-TGD36296.1;Parent=gene-C9F07_32750;Dbxref=NCBI_GP:TGD36296.1;Name=TGD36296.1;end_range=1030,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=C9F07_32750;partial=true;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=TGD36296.1;transl_table=11 ##sequence-region PYKI01000935.1 1 1030 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000935.1 Genbank region 1 1030 . + . ID=PYKI01000935.1:1..1030;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000935.1 Genbank gene 1 383 . - . ID=gene-C9F07_08525;Name=C9F07_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08525;partial=true;start_range=.,1 PYKI01000935.1 Protein Homology CDS 1 383 . - 0 ID=cds-TGE02120.1;Parent=gene-C9F07_08525;Dbxref=NCBI_GP:TGE02120.1;Name=TGE02120.1;Note=FAD/NAD(P)-binding domain%3B possibly part of an electron transfer system required for anaerobic carnitine reduction;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454687.1;locus_tag=C9F07_08525;partial=true;product=FAD-dependent oxidoreductase;protein_id=TGE02120.1;start_range=.,1;transl_table=11 PYKI01000935.1 Genbank gene 433 1030 . - . ID=gene-C9F07_08530;Name=C9F07_08530;end_range=1030,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08530;partial=true PYKI01000935.1 Protein Homology CDS 433 1030 . - 1 ID=cds-TGE02121.1;Parent=gene-C9F07_08530;Dbxref=NCBI_GP:TGE02121.1;Name=TGE02121.1;end_range=1030,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454686.1;locus_tag=C9F07_08530;partial=true;product=nitrogen fixation protein FixB;protein_id=TGE02121.1;transl_table=11 ##sequence-region PYKI01001246.1 1 1029 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001246.1 Genbank region 1 1029 . + . ID=PYKI01001246.1:1..1029;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001246.1 Genbank gene 75 833 . + . ID=gene-C9F07_11620;Name=C9F07_11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11620 PYKI01001246.1 Protein Homology CDS 75 833 . + 0 ID=cds-TGD90205.1;Parent=gene-C9F07_11620;Dbxref=NCBI_GP:TGD90205.1;Name=TGD90205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001468635.1;locus_tag=C9F07_11620;product=phage tail protein;protein_id=TGD90205.1;transl_table=11 PYKI01001246.1 Genbank gene 836 1029 . + . ID=gene-C9F07_11625;Name=C9F07_11625;end_range=1029,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11625;partial=true PYKI01001246.1 Protein Homology CDS 836 1029 . + 0 ID=cds-TGD90204.1;Parent=gene-C9F07_11625;Dbxref=NCBI_GP:TGD90204.1;Name=TGD90204.1;end_range=1029,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000972188.1;locus_tag=C9F07_11625;partial=true;product=phage tail protein;protein_id=TGD90204.1;transl_table=11 ##sequence-region PYKI01001073.1 1 1028 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001073.1 Genbank region 1 1028 . + . ID=PYKI01001073.1:1..1028;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001073.1 Genbank gene 32 652 . - . ID=gene-C9F07_09960;Name=C9F07_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09960 PYKI01001073.1 Protein Homology CDS 32 652 . - 0 ID=cds-TGD95912.1;Parent=gene-C9F07_09960;Dbxref=NCBI_GP:TGD95912.1;Name=TGD95912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457791.1;locus_tag=C9F07_09960;product=homoserine/homoserine lactone efflux protein;protein_id=TGD95912.1;transl_table=11 PYKI01001073.1 Genbank gene 763 1028 . + . ID=gene-C9F07_09965;Name=C9F07_09965;end_range=1028,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09965;partial=true PYKI01001073.1 Protein Homology CDS 763 1028 . + 0 ID=cds-TGD95913.1;Parent=gene-C9F07_09965;Dbxref=NCBI_GP:TGD95913.1;Name=TGD95913.1;Note=lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates;end_range=1028,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=C9F07_09965;partial=true;product=lysophospholipase;protein_id=TGD95913.1;transl_table=11 ##sequence-region PYKI01002104.1 1 1028 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002104.1 Genbank region 1 1028 . + . ID=PYKI01002104.1:1..1028;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002104.1 Genbank gene 1 391 . + . ID=gene-C9F07_20420;Name=C9F07_20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20420;partial=true;start_range=.,1 PYKI01002104.1 Protein Homology CDS 1 391 . + 1 ID=cds-TGD58776.1;Parent=gene-C9F07_20420;Dbxref=NCBI_GP:TGD58776.1;Name=TGD58776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=C9F07_20420;partial=true;product=mechanosensitive ion channel protein MscS;protein_id=TGD58776.1;start_range=.,1;transl_table=11 PYKI01002104.1 Genbank gene 464 1027 . - . ID=gene-C9F07_20425;Name=C9F07_20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20425 PYKI01002104.1 Protein Homology CDS 464 1027 . - 0 ID=cds-TGD58777.1;Parent=gene-C9F07_20425;Dbxref=NCBI_GP:TGD58777.1;Name=TGD58777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013574973.1;locus_tag=C9F07_20425;product=XRE family transcriptional regulator;protein_id=TGD58777.1;transl_table=11 ##sequence-region PYKI01000440.1 1 1027 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000440.1 Genbank region 1 1027 . + . ID=PYKI01000440.1:1..1027;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000440.1 Genbank gene 1 436 . - . ID=gene-C9F07_03380;Name=C9F07_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03380;partial=true;start_range=.,1 PYKI01000440.1 Protein Homology CDS 1 436 . - 0 ID=cds-TGE20823.1;Parent=gene-C9F07_03380;Dbxref=NCBI_GP:TGE20823.1;Name=TGE20823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=C9F07_03380;partial=true;product=disulfide bond formation protein DsbA;protein_id=TGE20823.1;start_range=.,1;transl_table=11 PYKI01000440.1 Genbank gene 433 1027 . - . ID=gene-C9F07_03385;Name=C9F07_03385;end_range=1027,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03385;partial=true PYKI01000440.1 Protein Homology CDS 433 1027 . - 1 ID=cds-TGE20824.1;Parent=gene-C9F07_03385;Dbxref=NCBI_GP:TGE20824.1;Name=TGE20824.1;end_range=1027,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455609.1;locus_tag=C9F07_03385;partial=true;product=hypothetical protein;protein_id=TGE20824.1;transl_table=11 ##sequence-region PYKI01001414.1 1 1027 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001414.1 Genbank region 1 1027 . + . ID=PYKI01001414.1:1..1027;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001414.1 Genbank gene 211 1027 . + . ID=gene-C9F07_13415;Name=cysK;end_range=1027,.;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=C9F07_13415;partial=true PYKI01001414.1 Protein Homology CDS 211 1027 . + 0 ID=cds-TGD83807.1;Parent=gene-C9F07_13415;Dbxref=NCBI_GP:TGD83807.1;Name=TGD83807.1;end_range=1027,.;gbkey=CDS;gene=cysK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=C9F07_13415;partial=true;product=cysteine synthase A;protein_id=TGD83807.1;transl_table=11 ##sequence-region PYKI01003352.1 1 1026 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003352.1 Genbank region 1 1026 . + . ID=PYKI01003352.1:1..1026;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003352.1 Genbank gene 1 211 . - . ID=gene-C9F07_33760;Name=C9F07_33760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33760;partial=true;start_range=.,1 PYKI01003352.1 Protein Homology CDS 1 211 . - 0 ID=cds-TGD35020.1;Parent=gene-C9F07_33760;Dbxref=NCBI_GP:TGD35020.1;Name=TGD35020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458371.1;locus_tag=C9F07_33760;partial=true;product=cytoplasmic protein;protein_id=TGD35020.1;start_range=.,1;transl_table=11 PYKI01003352.1 Genbank gene 227 1026 . - . ID=gene-C9F07_33765;Name=C9F07_33765;end_range=1026,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33765;partial=true PYKI01003352.1 Protein Homology CDS 227 1026 . - 2 ID=cds-TGD35021.1;Parent=gene-C9F07_33765;Dbxref=NCBI_GP:TGD35021.1;Name=TGD35021.1;end_range=1026,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=C9F07_33765;partial=true;product=ribokinase;protein_id=TGD35021.1;transl_table=11 ##sequence-region PYKI01003232.1 1 1026 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003232.1 Genbank region 1 1026 . + . ID=PYKI01003232.1:1..1026;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003232.1 Genbank pseudogene 8 201 . - . ID=gene-C9F07_32555;Name=C9F07_32555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32555;pseudo=true PYKI01003232.1 Protein Homology CDS 8 201 . - 0 ID=cds-C9F07_32555;Parent=gene-C9F07_32555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529983.1;locus_tag=C9F07_32555;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01003232.1 Genbank gene 251 613 . - . ID=gene-C9F07_32560;Name=C9F07_32560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32560 PYKI01003232.1 Protein Homology CDS 251 613 . - 0 ID=cds-TGD36542.1;Parent=gene-C9F07_32560;Dbxref=NCBI_GP:TGD36542.1;Name=TGD36542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458237.1;locus_tag=C9F07_32560;product=hypothetical protein;protein_id=TGD36542.1;transl_table=11 ##sequence-region PYKI01002209.1 1 1025 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002209.1 Genbank region 1 1025 . + . ID=PYKI01002209.1:1..1025;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002209.1 Genbank gene 5 382 . - . ID=gene-C9F07_21500;Name=C9F07_21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21500 PYKI01002209.1 Protein Homology CDS 5 382 . - 0 ID=cds-TGD56503.1;Parent=gene-C9F07_21500;Dbxref=NCBI_GP:TGD56503.1;Name=TGD56503.1;Note=with FlhA%2C FlhB%2C FliP%2C FliQ and FliR is one of the membrane components of the flagellar export apparatus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456539.1;locus_tag=C9F07_21500;product=flagellar biosynthesis protein FliO;protein_id=TGD56503.1;transl_table=11 PYKI01002209.1 Genbank gene 382 795 . - . ID=gene-C9F07_21505;Name=C9F07_21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21505 PYKI01002209.1 Protein Homology CDS 382 795 . - 0 ID=cds-TGD56504.1;Parent=gene-C9F07_21505;Dbxref=NCBI_GP:TGD56504.1;Name=TGD56504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906238.1;locus_tag=C9F07_21505;product=flagellar motor switch protein FliN;protein_id=TGD56504.1;transl_table=11 PYKI01002209.1 Genbank gene 792 1025 . - . ID=gene-C9F07_21510;Name=fliM;end_range=1025,.;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=C9F07_21510;partial=true PYKI01002209.1 Protein Homology CDS 792 1025 . - 0 ID=cds-TGD56505.1;Parent=gene-C9F07_21510;Dbxref=NCBI_GP:TGD56505.1;Name=TGD56505.1;Note=with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation;end_range=1025,.;gbkey=CDS;gene=fliM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=C9F07_21510;partial=true;product=flagellar motor switch protein FliM;protein_id=TGD56505.1;transl_table=11 ##sequence-region PYKI01002245.1 1 1024 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002245.1 Genbank region 1 1024 . + . ID=PYKI01002245.1:1..1024;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002245.1 Genbank pseudogene 1 1004 . + . ID=gene-C9F07_21945;Name=C9F07_21945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21945;pseudo=true PYKI01002245.1 Protein Homology CDS 1 1004 . + 2 ID=cds-C9F07_21945;Parent=gene-C9F07_21945;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000069371.1;locus_tag=C9F07_21945;product=phosphoenolpyruvate synthase;pseudo=true;transl_table=11 ##sequence-region PYKI01001275.1 1 1024 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001275.1 Genbank region 1 1024 . + . ID=PYKI01001275.1:1..1024;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001275.1 Genbank gene 1 409 . - . ID=gene-C9F07_11940;Name=C9F07_11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11940;partial=true;start_range=.,1 PYKI01001275.1 Protein Homology CDS 1 409 . - 0 ID=cds-TGD88665.1;Parent=gene-C9F07_11940;Dbxref=NCBI_GP:TGD88665.1;Name=TGD88665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=C9F07_11940;partial=true;product=DUF1016 domain-containing protein;protein_id=TGD88665.1;start_range=.,1;transl_table=11 PYKI01001275.1 Genbank gene 617 1024 . - . ID=gene-C9F07_11945;Name=C9F07_11945;end_range=1024,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11945;partial=true PYKI01001275.1 Protein Homology CDS 617 1024 . - 0 ID=cds-TGD88666.1;Parent=gene-C9F07_11945;Dbxref=NCBI_GP:TGD88666.1;Name=TGD88666.1;end_range=1024,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=C9F07_11945;partial=true;product=glutamate synthase small subunit;protein_id=TGD88666.1;transl_table=11 ##sequence-region PYKI01001852.1 1 1024 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001852.1 Genbank region 1 1024 . + . ID=PYKI01001852.1:1..1024;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001852.1 Genbank gene 1 977 . - . ID=gene-C9F07_17825;Name=C9F07_17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17825;partial=true;start_range=.,1 PYKI01001852.1 Protein Homology CDS 1 977 . - 0 ID=cds-TGD63470.1;Parent=gene-C9F07_17825;Dbxref=NCBI_GP:TGD63470.1;Name=TGD63470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455153.1;locus_tag=C9F07_17825;partial=true;product=miniconductance mechanosensitive channel;protein_id=TGD63470.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002237.1 1 3761 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002237.1 Genbank region 1 3761 . + . ID=PYKI01002237.1:1..3761;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002237.1 Genbank gene 1 1671 . + . ID=gene-C9F07_21835;Name=C9F07_21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21835;partial=true;start_range=.,1 PYKI01002237.1 Protein Homology CDS 1 1671 . + 0 ID=cds-TGD55982.1;Parent=gene-C9F07_21835;Dbxref=NCBI_GP:TGD55982.1;Name=TGD55982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458804.1;locus_tag=C9F07_21835;partial=true;product=ribonuclease R;protein_id=TGD55982.1;start_range=.,1;transl_table=11 PYKI01002237.1 Genbank gene 1762 2493 . + . ID=gene-C9F07_21840;Name=C9F07_21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21840 PYKI01002237.1 Protein Homology CDS 1762 2493 . + 0 ID=cds-TGD55983.1;Parent=gene-C9F07_21840;Dbxref=NCBI_GP:TGD55983.1;Name=TGD55983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=C9F07_21840;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=TGD55983.1;transl_table=11 PYKI01002237.1 Genbank gene 2626 3030 . + . ID=gene-C9F07_21845;Name=C9F07_21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21845 PYKI01002237.1 Protein Homology CDS 2626 3030 . + 0 ID=cds-TGD55984.1;Parent=gene-C9F07_21845;Dbxref=NCBI_GP:TGD55984.1;Name=TGD55984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=C9F07_21845;product=DUF2170 domain-containing protein;protein_id=TGD55984.1;transl_table=11 PYKI01002237.1 Genbank gene 3045 3743 . + . ID=gene-C9F07_21850;Name=C9F07_21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21850 PYKI01002237.1 Protein Homology CDS 3045 3743 . + 0 ID=cds-TGD55985.1;Parent=gene-C9F07_21850;Dbxref=NCBI_GP:TGD55985.1;Name=TGD55985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=C9F07_21850;product=hypothetical protein;protein_id=TGD55985.1;transl_table=11 ##sequence-region PYKI01001516.1 1 1024 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001516.1 Genbank region 1 1024 . + . ID=PYKI01001516.1:1..1024;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001516.1 Genbank gene 1 788 . + . ID=gene-C9F07_14450;Name=C9F07_14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14450;partial=true;start_range=.,1 PYKI01001516.1 Protein Homology CDS 1 788 . + 2 ID=cds-TGD76811.1;Parent=gene-C9F07_14450;Dbxref=NCBI_GP:TGD76811.1;Name=TGD76811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002412789.1;locus_tag=C9F07_14450;partial=true;product=sugar kinase;protein_id=TGD76811.1;start_range=.,1;transl_table=11 PYKI01001516.1 Genbank pseudogene 798 971 . + . ID=gene-C9F07_14455;Name=C9F07_14455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14455;pseudo=true PYKI01001516.1 Protein Homology CDS 798 971 . + 0 ID=cds-C9F07_14455;Parent=gene-C9F07_14455;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160741.1;locus_tag=C9F07_14455;product=aldo/keto reductase;pseudo=true;transl_table=11 ##sequence-region PYKI01002794.1 1 1023 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002794.1 Genbank region 1 1023 . + . ID=PYKI01002794.1:1..1023;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002794.1 Genbank gene 1 1023 . - . ID=gene-C9F07_27925;Name=C9F07_27925;end_range=1023,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27925;partial=true;start_range=.,1 PYKI01002794.1 Protein Homology CDS 1 1023 . - 2 ID=cds-TGD46006.1;Parent=gene-C9F07_27925;Dbxref=NCBI_GP:TGD46006.1;Name=TGD46006.1;end_range=1023,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9F07_27925;partial=true;product=hypothetical protein;protein_id=TGD46006.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003233.1 1 1023 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003233.1 Genbank region 1 1023 . + . ID=PYKI01003233.1:1..1023;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003233.1 Genbank pseudogene 101 775 . - . ID=gene-C9F07_32565;Name=C9F07_32565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32565;pseudo=true PYKI01003233.1 Protein Homology CDS 101 775 . - 0 ID=cds-C9F07_32565;Parent=gene-C9F07_32565;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=C9F07_32565;product=bgl operon transcriptional regulator BglJ;pseudo=true;transl_table=11 PYKI01003233.1 Genbank pseudogene 736 954 . - . ID=gene-C9F07_32570;Name=C9F07_32570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32570;pseudo=true PYKI01003233.1 Protein Homology CDS 736 954 . - 0 ID=cds-C9F07_32570;Parent=gene-C9F07_32570;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458962.1;locus_tag=C9F07_32570;product=DNA-binding response regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01003430.1 1 1023 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003430.1 Genbank region 1 1023 . + . ID=PYKI01003430.1:1..1023;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003430.1 Genbank pseudogene 1 802 . + . ID=gene-C9F07_34460;Name=C9F07_34460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34460;pseudo=true PYKI01003430.1 Protein Homology CDS 1 802 . + 1 ID=cds-C9F07_34460;Parent=gene-C9F07_34460;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456290.1;locus_tag=C9F07_34460;product=ribose-phosphate pyrophosphokinase;pseudo=true;transl_table=11 ##sequence-region PYKI01000175.1 1 1022 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000175.1 Genbank region 1 1022 . + . ID=PYKI01000175.1:1..1022;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000175.1 Genbank pseudogene 67 309 . + . ID=gene-C9F07_01190;Name=C9F07_01190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01190;pseudo=true PYKI01000175.1 Protein Homology CDS 67 309 . + 0 ID=cds-C9F07_01190;Parent=gene-C9F07_01190;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458938.1;locus_tag=C9F07_01190;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000175.1 Genbank gene 322 1022 . + . ID=gene-C9F07_01195;Name=C9F07_01195;end_range=1022,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01195;partial=true PYKI01000175.1 Protein Homology CDS 322 1022 . + 0 ID=cds-TGE30051.1;Parent=gene-C9F07_01195;Dbxref=NCBI_GP:TGE30051.1;Name=TGE30051.1;end_range=1022,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458937.1;locus_tag=C9F07_01195;partial=true;product=beta-aspartyl-peptidase;protein_id=TGE30051.1;transl_table=11 ##sequence-region PYKI01000882.1 1 1021 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000882.1 Genbank region 1 1021 . + . ID=PYKI01000882.1:1..1021;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000882.1 Genbank gene 1 324 . + . ID=gene-C9F07_08080;Name=C9F07_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08080;partial=true;start_range=.,1 PYKI01000882.1 Protein Homology CDS 1 324 . + 0 ID=cds-TGE04425.1;Parent=gene-C9F07_08080;Dbxref=NCBI_GP:TGE04425.1;Name=TGE04425.1;Note=catalyzes the formation of 5-oxo-pent-3-ene-1%2C2%2C5-tricarboxylic acid from 5-carboxymethyl-2-hydroxy-muconic acid;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=C9F07_08080;partial=true;product=5-carboxymethyl-2-hydroxymuconate delta-isomerase;protein_id=TGE04425.1;start_range=.,1;transl_table=11 PYKI01000882.1 Genbank gene 469 1021 . + . ID=gene-C9F07_08085;Name=C9F07_08085;end_range=1021,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08085;partial=true PYKI01000882.1 Protein Homology CDS 469 1021 . + 0 ID=cds-TGE04426.1;Parent=gene-C9F07_08085;Dbxref=NCBI_GP:TGE04426.1;Name=TGE04426.1;end_range=1021,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455601.1;locus_tag=C9F07_08085;partial=true;product=2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase;protein_id=TGE04426.1;transl_table=11 ##sequence-region PYKI01003302.1 1 1021 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003302.1 Genbank region 1 1021 . + . ID=PYKI01003302.1:1..1021;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003302.1 Genbank gene 1 1021 . - . ID=gene-C9F07_33210;Name=C9F07_33210;end_range=1021,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33210;partial=true;start_range=.,1 PYKI01003302.1 Protein Homology CDS 1 1021 . - 1 ID=cds-TGD36043.1;Parent=gene-C9F07_33210;Dbxref=NCBI_GP:TGD36043.1;Name=TGD36043.1;end_range=1021,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456308.1;locus_tag=C9F07_33210;partial=true;product=potassium/proton antiporter;protein_id=TGD36043.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003110.1 1 1020 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003110.1 Genbank region 1 1020 . + . ID=PYKI01003110.1:1..1020;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003110.1 Genbank pseudogene 89 1020 . - . ID=gene-C9F07_31130;Name=entF;gbkey=Gene;gene=entF;gene_biotype=pseudogene;locus_tag=C9F07_31130;pseudo=true PYKI01003110.1 Protein Homology CDS 89 1020 . - 2 ID=cds-C9F07_31130;Parent=gene-C9F07_31130;Note=with EntB%2C EntD%2C and EntE forms the multienzyme complex enterobactin synthase%3B EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=entF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=C9F07_31130;product=non-ribosomal peptide synthetase;pseudo=true;transl_table=11 ##sequence-region PYKI01002673.1 1 1018 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002673.1 Genbank region 1 1018 . + . ID=PYKI01002673.1:1..1018;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002673.1 Genbank gene 1 368 . + . ID=gene-C9F07_26635;Name=C9F07_26635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26635;partial=true;start_range=.,1 PYKI01002673.1 Protein Homology CDS 1 368 . + 2 ID=cds-TGD48842.1;Parent=gene-C9F07_26635;Dbxref=NCBI_GP:TGD48842.1;Name=TGD48842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457607.1;locus_tag=C9F07_26635;partial=true;product=aerotaxis receptor;protein_id=TGD48842.1;start_range=.,1;transl_table=11 PYKI01002673.1 Genbank gene 755 1018 . + . ID=gene-C9F07_26640;Name=C9F07_26640;end_range=1018,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26640;partial=true PYKI01002673.1 Protein Homology CDS 755 1018 . + 0 ID=cds-TGD48843.1;Parent=gene-C9F07_26640;Dbxref=NCBI_GP:TGD48843.1;Name=TGD48843.1;end_range=1018,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457606.1;locus_tag=C9F07_26640;partial=true;product=methyl-accepting chemotaxis protein;protein_id=TGD48843.1;transl_table=11 ##sequence-region PYKI01002763.1 1 3759 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002763.1 Genbank region 1 3759 . + . ID=PYKI01002763.1:1..3759;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002763.1 Genbank gene 12 1184 . + . ID=gene-C9F07_27600;Name=C9F07_27600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27600 PYKI01002763.1 Protein Homology CDS 12 1184 . + 0 ID=cds-TGD46649.1;Parent=gene-C9F07_27600;Dbxref=NCBI_GP:TGD46649.1;Name=TGD46649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=C9F07_27600;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=TGD46649.1;transl_table=11 PYKI01002763.1 Genbank gene 1335 1802 . + . ID=gene-C9F07_27605;Name=C9F07_27605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27605 PYKI01002763.1 Protein Homology CDS 1335 1802 . + 0 ID=cds-TGD46647.1;Parent=gene-C9F07_27605;Dbxref=NCBI_GP:TGD46647.1;Name=TGD46647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456610.1;locus_tag=C9F07_27605;product=DNA gyrase inhibitor SbmC;protein_id=TGD46647.1;transl_table=11 PYKI01002763.1 Genbank pseudogene 1921 2979 . + . ID=gene-C9F07_27610;Name=C9F07_27610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27610;pseudo=true PYKI01002763.1 Protein Homology CDS 1921 2979 . + 0 ID=cds-C9F07_27610;Parent=gene-C9F07_27610;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=C9F07_27610;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002763.1 Genbank gene 3224 3559 . + . ID=gene-C9F07_27615;Name=C9F07_27615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27615 PYKI01002763.1 Protein Homology CDS 3224 3559 . + 0 ID=cds-TGD46648.1;Parent=gene-C9F07_27615;Dbxref=NCBI_GP:TGD46648.1;Name=TGD46648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456608.1;locus_tag=C9F07_27615;product=DUF496 domain-containing protein;protein_id=TGD46648.1;transl_table=11 PYKI01002763.1 Genbank gene 3593 3759 . - . ID=gene-C9F07_27620;Name=C9F07_27620;end_range=3759,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27620;partial=true PYKI01002763.1 Protein Homology CDS 3593 3759 . - 2 ID=cds-TGD46650.1;Parent=gene-C9F07_27620;Dbxref=NCBI_GP:TGD46650.1;Name=TGD46650.1;end_range=3759,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456607.1;locus_tag=C9F07_27620;partial=true;product=GHMP kinase;protein_id=TGD46650.1;transl_table=11 ##sequence-region PYKI01001300.1 1 1018 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001300.1 Genbank region 1 1018 . + . ID=PYKI01001300.1:1..1018;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001300.1 Genbank pseudogene 96 842 . - . ID=gene-C9F07_12185;Name=C9F07_12185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12185;pseudo=true PYKI01001300.1 Protein Homology CDS 96 842 . - 0 ID=cds-C9F07_12185;Parent=gene-C9F07_12185;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456494.1;locus_tag=C9F07_12185;product=alpha%2Calpha-trehalose-phosphate synthase;pseudo=true;transl_table=11 PYKI01001300.1 Genbank gene 817 1018 . - . ID=gene-C9F07_12190;Name=C9F07_12190;end_range=1018,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12190;partial=true PYKI01001300.1 Protein Homology CDS 817 1018 . - 1 ID=cds-TGD87164.1;Parent=gene-C9F07_12190;Dbxref=NCBI_GP:TGD87164.1;Name=TGD87164.1;end_range=1018,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456495.1;locus_tag=C9F07_12190;partial=true;product=trehalose-6-phosphate phosphatase;protein_id=TGD87164.1;transl_table=11 ##sequence-region PYKI01001244.1 1 1017 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001244.1 Genbank region 1 1017 . + . ID=PYKI01001244.1:1..1017;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001244.1 Genbank gene 1 573 . + . ID=gene-C9F07_11605;Name=C9F07_11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11605;partial=true;start_range=.,1 PYKI01001244.1 Protein Homology CDS 1 573 . + 0 ID=cds-TGD90207.1;Parent=gene-C9F07_11605;Dbxref=NCBI_GP:TGD90207.1;Name=TGD90207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=C9F07_11605;partial=true;product=sulfate transporter subunit;protein_id=TGD90207.1;start_range=.,1;transl_table=11 PYKI01001244.1 Genbank gene 674 1017 . + . ID=gene-C9F07_11610;Name=C9F07_11610;end_range=1017,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11610;partial=true PYKI01001244.1 Protein Homology CDS 674 1017 . + 0 ID=cds-TGD90208.1;Parent=gene-C9F07_11610;Dbxref=NCBI_GP:TGD90208.1;Name=TGD90208.1;end_range=1017,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=C9F07_11610;partial=true;product=hypothetical protein;protein_id=TGD90208.1;transl_table=11 ##sequence-region PYKI01000635.1 1 1017 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000635.1 Genbank region 1 1017 . + . ID=PYKI01000635.1:1..1017;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000635.1 Genbank pseudogene 1 889 . + . ID=gene-C9F07_05475;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=pseudogene;locus_tag=C9F07_05475;pseudo=true PYKI01000635.1 Protein Homology CDS 1 889 . + 1 ID=cds-C9F07_05475;Parent=gene-C9F07_05475;Note=the hook connects flagellar basal body to the flagellar filament%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455670.1;locus_tag=C9F07_05475;product=flagellar hook protein FlgE;pseudo=true;transl_table=11 PYKI01000635.1 Genbank gene 910 1017 . + . ID=gene-C9F07_05480;Name=C9F07_05480;end_range=1017,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05480;partial=true PYKI01000635.1 Protein Homology CDS 910 1017 . + 0 ID=cds-TGE13078.1;Parent=gene-C9F07_05480;Dbxref=NCBI_GP:TGE13078.1;Name=TGE13078.1;end_range=1017,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309482.1;locus_tag=C9F07_05480;partial=true;product=flagellar biosynthesis protein FlgF;protein_id=TGE13078.1;transl_table=11 ##sequence-region PYKI01002098.1 1 1016 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002098.1 Genbank region 1 1016 . + . ID=PYKI01002098.1:1..1016;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002098.1 Genbank gene 1 521 . - . ID=gene-C9F07_20370;Name=C9F07_20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20370;partial=true;start_range=.,1 PYKI01002098.1 Protein Homology CDS 1 521 . - 0 ID=cds-TGD58790.1;Parent=gene-C9F07_20370;Dbxref=NCBI_GP:TGD58790.1;Name=TGD58790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455943.1;locus_tag=C9F07_20370;partial=true;product=alcohol dehydrogenase;protein_id=TGD58790.1;start_range=.,1;transl_table=11 PYKI01002098.1 Genbank gene 496 1016 . - . ID=gene-C9F07_20375;Name=C9F07_20375;end_range=1016,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20375;partial=true PYKI01002098.1 Protein Homology CDS 496 1016 . - 2 ID=cds-TGD58791.1;Parent=gene-C9F07_20375;Dbxref=NCBI_GP:TGD58791.1;Name=TGD58791.1;end_range=1016,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455942.1;locus_tag=C9F07_20375;partial=true;product=MFS transporter;protein_id=TGD58791.1;transl_table=11 ##sequence-region PYKI01002726.1 1 1016 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002726.1 Genbank region 1 1016 . + . ID=PYKI01002726.1:1..1016;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002726.1 Genbank gene 1 233 . - . ID=gene-C9F07_27210;Name=C9F07_27210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27210;partial=true;start_range=.,1 PYKI01002726.1 Protein Homology CDS 1 233 . - 0 ID=cds-TGD47540.1;Parent=gene-C9F07_27210;Dbxref=NCBI_GP:TGD47540.1;Name=TGD47540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455769.1;locus_tag=C9F07_27210;partial=true;product=hypothetical protein;protein_id=TGD47540.1;start_range=.,1;transl_table=11 PYKI01002726.1 Genbank gene 323 505 . - . ID=gene-C9F07_27215;Name=C9F07_27215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27215 PYKI01002726.1 Protein Homology CDS 323 505 . - 0 ID=cds-TGD47541.1;Parent=gene-C9F07_27215;Dbxref=NCBI_GP:TGD47541.1;Name=TGD47541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455770.1;locus_tag=C9F07_27215;product=stress-induced acidophilic repeat motif-containing protein;protein_id=TGD47541.1;transl_table=11 ##sequence-region PYKI01002246.1 1 1015 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002246.1 Genbank region 1 1015 . + . ID=PYKI01002246.1:1..1015;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002246.1 Genbank gene 1 1015 . + . ID=gene-C9F07_21950;Name=C9F07_21950;end_range=1015,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21950;partial=true;start_range=.,1 PYKI01002246.1 Protein Homology CDS 1 1015 . + 0 ID=cds-TGD55758.1;Parent=gene-C9F07_21950;Dbxref=NCBI_GP:TGD55758.1;Name=TGD55758.1;Note=transport system that facilitates potassium-efflux;end_range=1015,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454698.1;locus_tag=C9F07_21950;partial=true;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=TGD55758.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000793.1 1 1014 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000793.1 Genbank region 1 1014 . + . ID=PYKI01000793.1:1..1014;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000793.1 Genbank gene 1 648 . - . ID=gene-C9F07_07125;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=C9F07_07125;partial=true;start_range=.,1 PYKI01000793.1 Protein Homology CDS 1 648 . - 0 ID=cds-TGE09153.1;Parent=gene-C9F07_07125;Dbxref=NCBI_GP:TGE09153.1;Name=TGE09153.1;gbkey=CDS;gene=cof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=C9F07_07125;partial=true;product=HMP-PP phosphatase;protein_id=TGE09153.1;start_range=.,1;transl_table=11 PYKI01000793.1 Genbank pseudogene 748 945 . + . ID=gene-C9F07_07130;Name=C9F07_07130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07130;pseudo=true PYKI01000793.1 Protein Homology CDS 748 945 . + 0 ID=cds-C9F07_07130;Parent=gene-C9F07_07130;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455053.1;locus_tag=C9F07_07130;product=peptide ABC transporter substrate-binding protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000934.1 1 1013 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000934.1 Genbank region 1 1013 . + . ID=PYKI01000934.1:1..1013;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000934.1 Genbank gene 45 1013 . - . ID=gene-C9F07_08520;Name=C9F07_08520;end_range=1013,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08520;partial=true PYKI01000934.1 Protein Homology CDS 45 1013 . - 0 ID=cds-TGE02208.1;Parent=gene-C9F07_08520;Dbxref=NCBI_GP:TGE02208.1;Name=TGE02208.1;end_range=1013,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001610355.1;locus_tag=C9F07_08520;partial=true;product=pyrroloquinoline quinone-dependent dehydrogenase;protein_id=TGE02208.1;transl_table=11 ##sequence-region PYKI01002066.1 1 1013 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002066.1 Genbank region 1 1013 . + . ID=PYKI01002066.1:1..1013;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002066.1 Genbank gene 18 1013 . - . ID=gene-C9F07_20000;Name=C9F07_20000;end_range=1013,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20000;partial=true PYKI01002066.1 Protein Homology CDS 18 1013 . - 0 ID=cds-TGD59350.1;Parent=gene-C9F07_20000;Dbxref=NCBI_GP:TGD59350.1;Name=TGD59350.1;end_range=1013,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001391314.1;locus_tag=C9F07_20000;partial=true;product=fimbrial assembly protein;protein_id=TGD59350.1;transl_table=11 ##sequence-region PYKI01003009.1 1 1010 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003009.1 Genbank region 1 1010 . + . ID=PYKI01003009.1:1..1010;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003009.1 Genbank gene 43 426 . + . ID=gene-C9F07_30155;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;gene_synonym=yliH;locus_tag=C9F07_30155 PYKI01003009.1 Protein Homology CDS 43 426 . + 0 ID=cds-TGD41203.1;Parent=gene-C9F07_30155;Dbxref=NCBI_GP:TGD41203.1;Name=TGD41203.1;Note=BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455387.1;locus_tag=C9F07_30155;product=transcriptional regulator;protein_id=TGD41203.1;transl_table=11 PYKI01003009.1 Genbank pseudogene 478 775 . + . ID=gene-C9F07_30160;Name=C9F07_30160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30160;pseudo=true PYKI01003009.1 Protein Homology CDS 478 775 . + 0 ID=cds-C9F07_30160;Parent=gene-C9F07_30160;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004989461.1;locus_tag=C9F07_30160;product=IS4 family transposase;pseudo=true;transl_table=11 ##sequence-region PYKI01003270.1 1 3757 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003270.1 Genbank region 1 3757 . + . ID=PYKI01003270.1:1..3757;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003270.1 Genbank pseudogene 5 1219 . - . ID=gene-C9F07_32895;Name=C9F07_32895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32895;pseudo=true PYKI01003270.1 Protein Homology CDS 5 1219 . - 0 ID=cds-C9F07_32895;Parent=gene-C9F07_32895;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121613.1;locus_tag=C9F07_32895;product=glycerol-3-phosphate dehydrogenase;pseudo=true;transl_table=11 PYKI01003270.1 Genbank gene 1418 1744 . + . ID=gene-C9F07_32900;Name=C9F07_32900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32900 PYKI01003270.1 Protein Homology CDS 1418 1744 . + 0 ID=cds-TGD36201.1;Parent=gene-C9F07_32900;Dbxref=NCBI_GP:TGD36201.1;Name=TGD36201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458386.1;locus_tag=C9F07_32900;product=thiosulfate sulfurtransferase GlpE;protein_id=TGD36201.1;transl_table=11 PYKI01003270.1 Genbank gene 1820 2650 . + . ID=gene-C9F07_32905;Name=C9F07_32905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32905 PYKI01003270.1 Protein Homology CDS 1820 2650 . + 0 ID=cds-TGD36198.1;Parent=gene-C9F07_32905;Dbxref=NCBI_GP:TGD36198.1;Name=TGD36198.1;Note=protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458387.1;locus_tag=C9F07_32905;product=rhomboid protease GlpG;protein_id=TGD36198.1;transl_table=11 PYKI01003270.1 Genbank gene 2744 3502 . + . ID=gene-C9F07_32910;Name=C9F07_32910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32910 PYKI01003270.1 Protein Homology CDS 2744 3502 . + 0 ID=cds-TGD36199.1;Parent=gene-C9F07_32910;Dbxref=NCBI_GP:TGD36199.1;Name=TGD36199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458388.1;locus_tag=C9F07_32910;product=DeoR/GlpR family transcriptional regulator;protein_id=TGD36199.1;transl_table=11 PYKI01003270.1 Genbank gene 3569 3757 . - . ID=gene-C9F07_32915;Name=C9F07_32915;end_range=3757,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32915;partial=true PYKI01003270.1 Protein Homology CDS 3569 3757 . - 0 ID=cds-TGD36200.1;Parent=gene-C9F07_32915;Dbxref=NCBI_GP:TGD36200.1;Name=TGD36200.1;end_range=3757,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=C9F07_32915;partial=true;product=helix-turn-helix transcriptional regulator;protein_id=TGD36200.1;transl_table=11 ##sequence-region PYKI01000233.1 1 1009 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000233.1 Genbank region 1 1009 . + . ID=PYKI01000233.1:1..1009;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000233.1 Genbank gene 72 497 . - . ID=gene-C9F07_01520;Name=C9F07_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01520 PYKI01000233.1 Protein Homology CDS 72 497 . - 0 ID=cds-TGE27874.1;Parent=gene-C9F07_01520;Dbxref=NCBI_GP:TGE27874.1;Name=TGE27874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459837.1;locus_tag=C9F07_01520;product=GntP family permease;protein_id=TGE27874.1;transl_table=11 PYKI01000233.1 Genbank gene 844 1009 . + . ID=gene-C9F07_01525;Name=C9F07_01525;end_range=1009,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01525;partial=true PYKI01000233.1 Protein Homology CDS 844 1009 . + 0 ID=cds-TGE27875.1;Parent=gene-C9F07_01525;Dbxref=NCBI_GP:TGE27875.1;Name=TGE27875.1;end_range=1009,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611160.1;locus_tag=C9F07_01525;partial=true;product=IS1 family transposase;protein_id=TGE27875.1;transl_table=11 ##sequence-region PYKI01003313.1 1 1009 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003313.1 Genbank region 1 1009 . + . ID=PYKI01003313.1:1..1009;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003313.1 Genbank gene 1 1009 . - . ID=gene-C9F07_33325;Name=C9F07_33325;end_range=1009,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33325;partial=true;start_range=.,1 PYKI01003313.1 Protein Homology CDS 1 1009 . - 0 ID=cds-TGD35992.1;Parent=gene-C9F07_33325;Dbxref=NCBI_GP:TGD35992.1;Name=TGD35992.1;Note=is involved in outer membrane permeability;end_range=1009,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=C9F07_33325;partial=true;product=LPS-assembly protein LptD;protein_id=TGD35992.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000728.1 1 1009 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000728.1 Genbank region 1 1009 . + . ID=PYKI01000728.1:1..1009;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000728.1 Genbank gene 1 1009 . - . ID=gene-C9F07_06390;Name=C9F07_06390;end_range=1009,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06390;partial=true;start_range=.,1 PYKI01000728.1 Protein Homology CDS 1 1009 . - 0 ID=cds-TGE10980.1;Parent=gene-C9F07_06390;Dbxref=NCBI_GP:TGE10980.1;Name=TGE10980.1;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;end_range=1009,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455460.1;locus_tag=C9F07_06390;partial=true;product=formate acetyltransferase;protein_id=TGE10980.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003243.1 1 1009 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003243.1 Genbank region 1 1009 . + . ID=PYKI01003243.1:1..1009;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003243.1 Genbank gene 1 786 . - . ID=gene-C9F07_32660;Name=C9F07_32660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32660;partial=true;start_range=.,1 PYKI01003243.1 Protein Homology CDS 1 786 . - 0 ID=cds-TGD36394.1;Parent=gene-C9F07_32660;Dbxref=NCBI_GP:TGD36394.1;Name=TGD36394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457622.1;locus_tag=C9F07_32660;partial=true;product=glutathione-dependent reductase;protein_id=TGD36394.1;start_range=.,1;transl_table=11 PYKI01003243.1 Genbank gene 854 1009 . - . ID=gene-C9F07_32665;Name=C9F07_32665;end_range=1009,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32665;partial=true PYKI01003243.1 Protein Homology CDS 854 1009 . - 0 ID=cds-TGD36395.1;Parent=gene-C9F07_32665;Dbxref=NCBI_GP:TGD36395.1;Name=TGD36395.1;end_range=1009,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=C9F07_32665;partial=true;product=DoxX family protein;protein_id=TGD36395.1;transl_table=11 ##sequence-region PYKI01001101.1 1 1009 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001101.1 Genbank region 1 1009 . + . ID=PYKI01001101.1:1..1009;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001101.1 Genbank gene 1 334 . - . ID=gene-C9F07_10280;Name=C9F07_10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10280;partial=true;start_range=.,1 PYKI01001101.1 Protein Homology CDS 1 334 . - 0 ID=cds-TGD95223.1;Parent=gene-C9F07_10280;Dbxref=NCBI_GP:TGD95223.1;Name=TGD95223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457304.1;locus_tag=C9F07_10280;partial=true;product=gluconate permease;protein_id=TGD95223.1;start_range=.,1;transl_table=11 PYKI01001101.1 Genbank gene 331 1009 . - . ID=gene-C9F07_10285;Name=C9F07_10285;end_range=1009,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10285;partial=true PYKI01001101.1 Protein Homology CDS 331 1009 . - 1 ID=cds-TGD95224.1;Parent=gene-C9F07_10285;Dbxref=NCBI_GP:TGD95224.1;Name=TGD95224.1;end_range=1009,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=C9F07_10285;partial=true;product=hypothetical protein;protein_id=TGD95224.1;transl_table=11 ##sequence-region PYKI01001096.1 1 1008 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001096.1 Genbank region 1 1008 . + . ID=PYKI01001096.1:1..1008;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001096.1 Genbank gene 1 93 . - . ID=gene-C9F07_10210;Name=C9F07_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10210;partial=true;start_range=.,1 PYKI01001096.1 Protein Homology CDS 1 93 . - 0 ID=cds-TGD95385.1;Parent=gene-C9F07_10210;Dbxref=NCBI_GP:TGD95385.1;Name=TGD95385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456596.1;locus_tag=C9F07_10210;partial=true;product=microcompartment protein;protein_id=TGD95385.1;start_range=.,1;transl_table=11 PYKI01001096.1 Genbank gene 97 372 . - . ID=gene-C9F07_10215;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=C9F07_10215 PYKI01001096.1 Protein Homology CDS 97 372 . - 0 ID=cds-TGD95386.1;Parent=gene-C9F07_10215;Dbxref=NCBI_GP:TGD95386.1;Name=TGD95386.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456595.1;locus_tag=C9F07_10215;product=propanediol utilization microcompartment protein PduA;protein_id=TGD95386.1;transl_table=11 PYKI01001096.1 Genbank gene 391 741 . - . ID=gene-C9F07_10220;Name=C9F07_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10220 PYKI01001096.1 Protein Homology CDS 391 741 . - 0 ID=cds-TGD95387.1;Parent=gene-C9F07_10220;Dbxref=NCBI_GP:TGD95387.1;Name=TGD95387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=C9F07_10220;product=propanediol dehydratase;protein_id=TGD95387.1;transl_table=11 PYKI01001096.1 Genbank gene 731 1008 . - . ID=gene-C9F07_10225;Name=C9F07_10225;end_range=1008,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10225;partial=true PYKI01001096.1 Protein Homology CDS 731 1008 . - 2 ID=cds-TGD95388.1;Parent=gene-C9F07_10225;Dbxref=NCBI_GP:TGD95388.1;Name=TGD95388.1;end_range=1008,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456593.1;locus_tag=C9F07_10225;partial=true;product=diol dehydratase reactivase subunit alpha;protein_id=TGD95388.1;transl_table=11 ##sequence-region PYKI01001486.1 1 1007 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001486.1 Genbank region 1 1007 . + . ID=PYKI01001486.1:1..1007;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001486.1 Genbank gene 1 137 . - . ID=gene-C9F07_14140;Name=C9F07_14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14140;partial=true;start_range=.,1 PYKI01001486.1 Protein Homology CDS 1 137 . - 0 ID=cds-TGD79212.1;Parent=gene-C9F07_14140;Dbxref=NCBI_GP:TGD79212.1;Name=TGD79212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454866.1;locus_tag=C9F07_14140;partial=true;product=ribonuclease HI;protein_id=TGD79212.1;start_range=.,1;transl_table=11 PYKI01001486.1 Genbank gene 201 932 . + . ID=gene-C9F07_14145;Name=C9F07_14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14145 PYKI01001486.1 Protein Homology CDS 201 932 . + 0 ID=cds-TGD79213.1;Parent=gene-C9F07_14145;Dbxref=NCBI_GP:TGD79213.1;Name=TGD79213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454867.1;locus_tag=C9F07_14145;product=DNA polymerase III subunit epsilon;protein_id=TGD79213.1;transl_table=11 ##sequence-region PYKI01003590.1 1 1007 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003590.1 Genbank region 1 1007 . + . ID=PYKI01003590.1:1..1007;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003590.1 Genbank gene 1 1007 . + . ID=gene-C9F07_36210;Name=recB;end_range=1007,.;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=C9F07_36210;partial=true;start_range=.,1 PYKI01003590.1 Protein Homology CDS 1 1007 . + 1 ID=cds-TGD29829.1;Parent=gene-C9F07_36210;Dbxref=NCBI_GP:TGD29829.1;Name=TGD29829.1;Note=helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;end_range=1007,.;gbkey=CDS;gene=recB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457387.1;locus_tag=C9F07_36210;partial=true;product=exodeoxyribonuclease V subunit beta;protein_id=TGD29829.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000918.1 1 1006 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000918.1 Genbank region 1 1006 . + . ID=PYKI01000918.1:1..1006;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000918.1 Genbank gene 1 346 . + . ID=gene-C9F07_08375;Name=C9F07_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08375;partial=true;start_range=.,1 PYKI01000918.1 Protein Homology CDS 1 346 . + 1 ID=cds-TGE02905.1;Parent=gene-C9F07_08375;Dbxref=NCBI_GP:TGE02905.1;Name=TGE02905.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456925.1;locus_tag=C9F07_08375;partial=true;product=chorismate synthase;protein_id=TGE02905.1;start_range=.,1;transl_table=11 PYKI01000918.1 Genbank gene 350 1006 . + . ID=gene-C9F07_08380;Name=C9F07_08380;end_range=1006,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08380;partial=true PYKI01000918.1 Protein Homology CDS 350 1006 . + 0 ID=cds-TGE02906.1;Parent=gene-C9F07_08380;Dbxref=NCBI_GP:TGE02906.1;Name=TGE02906.1;end_range=1006,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456924.1;locus_tag=C9F07_08380;partial=true;product=penicillin-insensitive murein endopeptidase;protein_id=TGE02906.1;transl_table=11 ##sequence-region PYKI01000456.1 1 3757 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000456.1 Genbank region 1 3757 . + . ID=PYKI01000456.1:1..3757;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000456.1 Genbank gene 11 730 . + . ID=gene-C9F07_03545;Name=C9F07_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03545 PYKI01000456.1 Protein Homology CDS 11 730 . + 0 ID=cds-TGE19968.1;Parent=gene-C9F07_03545;Dbxref=NCBI_GP:TGE19968.1;Name=TGE19968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001678813.1;locus_tag=C9F07_03545;product=hydrogenase;protein_id=TGE19968.1;transl_table=11 PYKI01000456.1 Genbank gene 798 1226 . - . ID=gene-C9F07_03550;Name=C9F07_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03550 PYKI01000456.1 Protein Homology CDS 798 1226 . - 0 ID=cds-TGE19963.1;Parent=gene-C9F07_03550;Dbxref=NCBI_GP:TGE19963.1;Name=TGE19963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455191.1;locus_tag=C9F07_03550;product=universal stress protein UspG;protein_id=TGE19963.1;transl_table=11 PYKI01000456.1 Genbank gene 1289 1477 . - . ID=gene-C9F07_03555;Name=C9F07_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03555 PYKI01000456.1 Protein Homology CDS 1289 1477 . - 0 ID=cds-TGE19964.1;Parent=gene-C9F07_03555;Dbxref=NCBI_GP:TGE19964.1;Name=TGE19964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341145.1;locus_tag=C9F07_03555;product=hypothetical protein;protein_id=TGE19964.1;transl_table=11 PYKI01000456.1 Genbank gene 1448 2686 . + . ID=gene-C9F07_03560;Name=C9F07_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03560 PYKI01000456.1 Protein Homology CDS 1448 2686 . + 0 ID=cds-TGE19965.1;Parent=gene-C9F07_03560;Dbxref=NCBI_GP:TGE19965.1;Name=TGE19965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=C9F07_03560;product=glutathione-dependent formaldehyde dehydrogenase;protein_id=TGE19965.1;transl_table=11 PYKI01000456.1 Genbank gene 2771 3181 . - . ID=gene-C9F07_03565;Name=C9F07_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03565 PYKI01000456.1 Protein Homology CDS 2771 3181 . - 0 ID=cds-TGE19966.1;Parent=gene-C9F07_03565;Dbxref=NCBI_GP:TGE19966.1;Name=TGE19966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455193.1;locus_tag=C9F07_03565;product=nucleoside diphosphate kinase regulator;protein_id=TGE19966.1;transl_table=11 PYKI01000456.1 Genbank gene 3131 3313 . + . ID=gene-C9F07_03570;Name=C9F07_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03570 PYKI01000456.1 Protein Homology CDS 3131 3313 . + 0 ID=cds-TGE19969.1;Parent=gene-C9F07_03570;Dbxref=NCBI_GP:TGE19969.1;Name=TGE19969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001409686.1;locus_tag=C9F07_03570;product=hypothetical protein;protein_id=TGE19969.1;transl_table=11 PYKI01000456.1 Genbank gene 3416 3757 . - . ID=gene-C9F07_03575;Name=C9F07_03575;end_range=3757,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03575;partial=true PYKI01000456.1 Protein Homology CDS 3416 3757 . - 0 ID=cds-TGE19967.1;Parent=gene-C9F07_03575;Dbxref=NCBI_GP:TGE19967.1;Name=TGE19967.1;end_range=3757,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455194.1;locus_tag=C9F07_03575;partial=true;product=ribonuclease I;protein_id=TGE19967.1;transl_table=11 ##sequence-region PYKI01001335.1 1 1004 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001335.1 Genbank region 1 1004 . + . ID=PYKI01001335.1:1..1004;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001335.1 Genbank pseudogene 1 163 . + . ID=gene-C9F07_12465;Name=cbiH;gbkey=Gene;gene=cbiH;gene_biotype=pseudogene;locus_tag=C9F07_12465;pseudo=true PYKI01001335.1 Protein Homology CDS 1 163 . + 1 ID=cds-C9F07_12465;Parent=gene-C9F07_12465;Note=catalyzes the formation of cobalt-precorrin-4 from cobalt-precorrin-3B%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=cbiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456578.1;locus_tag=C9F07_12465;product=cobalt-precorrin-3B C(17)-methyltransferase;pseudo=true;transl_table=11 PYKI01001335.1 Genbank gene 160 951 . + . ID=gene-C9F07_12470;Name=C9F07_12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12470 PYKI01001335.1 Protein Homology CDS 160 951 . + 0 ID=cds-TGD85773.1;Parent=gene-C9F07_12470;Dbxref=NCBI_GP:TGD85773.1;Name=TGD85773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=C9F07_12470;product=cobalt-precorrin-6A/precorrin-6x reductase;protein_id=TGD85773.1;transl_table=11 ##sequence-region PYKI01000372.1 1 1004 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000372.1 Genbank region 1 1004 . + . ID=PYKI01000372.1:1..1004;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000372.1 Genbank pseudogene 1 949 . + . ID=gene-C9F07_02820;Name=C9F07_02820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02820;pseudo=true PYKI01000372.1 Protein Homology CDS 1 949 . + 1 ID=cds-C9F07_02820;Parent=gene-C9F07_02820;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458041.1;locus_tag=C9F07_02820;product=translational GTPase TypA;pseudo=true;transl_table=11 ##sequence-region PYKI01001893.1 1 1003 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001893.1 Genbank region 1 1003 . + . ID=PYKI01001893.1:1..1003;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001893.1 Genbank pseudogene 1 914 . + . ID=gene-C9F07_18265;Name=C9F07_18265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18265;pseudo=true PYKI01001893.1 Protein Homology CDS 1 914 . + 2 ID=cds-C9F07_18265;Parent=gene-C9F07_18265;Note=degrades small peptides%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457388.1;locus_tag=C9F07_18265;product=pitrilysin;pseudo=true;transl_table=11 ##sequence-region PYKI01003477.1 1 1002 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003477.1 Genbank region 1 1002 . + . ID=PYKI01003477.1:1..1002;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003477.1 Genbank gene 162 1002 . + . ID=gene-C9F07_35000;Name=tilS;end_range=1002,.;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=C9F07_35000;partial=true PYKI01003477.1 Protein Homology CDS 162 1002 . + 0 ID=cds-TGD32514.1;Parent=gene-C9F07_35000;Dbxref=NCBI_GP:TGD32514.1;Name=TGD32514.1;end_range=1002,.;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=C9F07_35000;partial=true;product=tRNA lysidine(34) synthetase TilS;protein_id=TGD32514.1;transl_table=11 ##sequence-region PYKI01001841.1 1 1002 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001841.1 Genbank region 1 1002 . + . ID=PYKI01001841.1:1..1002;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001841.1 Genbank gene 141 1002 . + . ID=gene-C9F07_17700;Name=C9F07_17700;end_range=1002,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17700;partial=true PYKI01001841.1 Protein Homology CDS 141 1002 . + 0 ID=cds-TGD63869.1;Parent=gene-C9F07_17700;Dbxref=NCBI_GP:TGD63869.1;Name=TGD63869.1;end_range=1002,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=C9F07_17700;partial=true;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=TGD63869.1;transl_table=11 ##sequence-region PYKI01002922.1 1 1000 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002922.1 Genbank region 1 1000 . + . ID=PYKI01002922.1:1..1000;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002922.1 Genbank gene 1 895 . + . ID=gene-C9F07_29300;Name=C9F07_29300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29300;partial=true;start_range=.,1 PYKI01002922.1 Protein Homology CDS 1 895 . + 1 ID=cds-TGD43108.1;Parent=gene-C9F07_29300;Dbxref=NCBI_GP:TGD43108.1;Name=TGD43108.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000784370.1;locus_tag=C9F07_29300;partial=true;product=MFS transporter;protein_id=TGD43108.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002995.1 1 996 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002995.1 Genbank region 1 996 . + . ID=PYKI01002995.1:1..996;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002995.1 Genbank gene 10 525 . + . ID=gene-C9F07_30055;Name=C9F07_30055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30055 PYKI01002995.1 Protein Homology CDS 10 525 . + 0 ID=cds-TGD41296.1;Parent=gene-C9F07_30055;Dbxref=NCBI_GP:TGD41296.1;Name=TGD41296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461743.1;locus_tag=C9F07_30055;product=S-ribosylhomocysteine lyase;protein_id=TGD41296.1;transl_table=11 PYKI01002995.1 Genbank gene 871 996 . + . ID=gene-C9F07_30060;Name=C9F07_30060;end_range=996,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30060;partial=true PYKI01002995.1 Protein Homology CDS 871 996 . + 0 ID=cds-TGD41297.1;Parent=gene-C9F07_30060;Dbxref=NCBI_GP:TGD41297.1;Name=TGD41297.1;end_range=996,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=C9F07_30060;partial=true;product=hypothetical protein;protein_id=TGD41297.1;transl_table=11 ##sequence-region PYKI01001216.1 1 996 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001216.1 Genbank region 1 996 . + . ID=PYKI01001216.1:1..996;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001216.1 Genbank gene 1 817 . - . ID=gene-C9F07_11385;Name=C9F07_11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11385;partial=true;start_range=.,1 PYKI01001216.1 Protein Homology CDS 1 817 . - 0 ID=cds-TGD91284.1;Parent=gene-C9F07_11385;Dbxref=NCBI_GP:TGD91284.1;Name=TGD91284.1;Note=citrate-ACP transferase%2C the alpha subunit catalyzes the formation of (3S)-citryl-CoA from acetyl-CoA and citrate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455198.1;locus_tag=C9F07_11385;partial=true;product=citrate lyase subunit alpha;protein_id=TGD91284.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003045.1 1 994 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003045.1 Genbank region 1 994 . + . ID=PYKI01003045.1:1..994;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003045.1 Genbank gene 1 378 . - . ID=gene-C9F07_30570;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=C9F07_30570;partial=true;start_range=.,1 PYKI01003045.1 Protein Homology CDS 1 378 . - 0 ID=cds-TGD41020.1;Parent=gene-C9F07_30570;Dbxref=NCBI_GP:TGD41020.1;Name=TGD41020.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=C9F07_30570;partial=true;product=type III secretion system gatekeeper InvE;protein_id=TGD41020.1;start_range=.,1;transl_table=11 PYKI01003045.1 Genbank gene 375 994 . - . ID=gene-C9F07_30575;Name=invG;end_range=994,.;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=C9F07_30575;partial=true PYKI01003045.1 Protein Homology CDS 375 994 . - 2 ID=cds-TGD41021.1;Parent=gene-C9F07_30575;Dbxref=NCBI_GP:TGD41021.1;Name=TGD41021.1;end_range=994,.;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=C9F07_30575;partial=true;product=type III secretion system outer membrane ring protein InvG;protein_id=TGD41021.1;transl_table=11 ##sequence-region PYKI01000730.1 1 3751 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000730.1 Genbank region 1 3751 . + . ID=PYKI01000730.1:1..3751;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000730.1 Genbank gene 1 105 . + . ID=gene-C9F07_06405;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F07_06405;partial=true;start_range=.,1 PYKI01000730.1 cmsearch rRNA 1 105 . + . ID=rna-C9F07_06405;Parent=gene-C9F07_06405;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00001,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_06405;partial=true;product=5S ribosomal RNA;start_range=.,1 PYKI01000730.1 cmsearch exon 1 105 . + . ID=exon-C9F07_06405-1;Parent=rna-C9F07_06405;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00001,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_06405;partial=true;product=5S ribosomal RNA;start_range=.,1 PYKI01000730.1 Genbank gene 889 1110 . - . ID=gene-C9F07_06410;Name=C9F07_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06410 PYKI01000730.1 Protein Homology CDS 889 1110 . - 0 ID=cds-TGE10975.1;Parent=gene-C9F07_06410;Dbxref=NCBI_GP:TGE10975.1;Name=TGE10975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457764.1;locus_tag=C9F07_06410;product=hypothetical protein;protein_id=TGE10975.1;transl_table=11 PYKI01000730.1 Genbank gene 1348 3751 . - . ID=gene-C9F07_06415;Name=C9F07_06415;end_range=3751,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06415;partial=true PYKI01000730.1 Protein Homology CDS 1348 3751 . - 1 ID=cds-TGE10976.1;Parent=gene-C9F07_06415;Dbxref=NCBI_GP:TGE10976.1;Name=TGE10976.1;end_range=3751,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=C9F07_06415;partial=true;product=hydrophobe/amphiphile efflux-1 family RND transporter;protein_id=TGE10976.1;transl_table=11 ##sequence-region PYKI01003041.1 1 994 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003041.1 Genbank region 1 994 . + . ID=PYKI01003041.1:1..994;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003041.1 Genbank gene 1 994 . - . ID=gene-C9F07_30530;Name=C9F07_30530;end_range=994,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30530;partial=true;start_range=.,1 PYKI01003041.1 Protein Homology CDS 1 994 . - 2 ID=cds-TGD41044.1;Parent=gene-C9F07_30530;Dbxref=NCBI_GP:TGD41044.1;Name=TGD41044.1;end_range=994,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=C9F07_30530;partial=true;product=trigger factor;protein_id=TGD41044.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002691.1 1 994 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002691.1 Genbank region 1 994 . + . ID=PYKI01002691.1:1..994;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002691.1 Genbank gene 1 994 . - . ID=gene-C9F07_26810;Name=C9F07_26810;end_range=994,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26810;partial=true;start_range=.,1 PYKI01002691.1 Protein Homology CDS 1 994 . - 1 ID=cds-TGD48408.1;Parent=gene-C9F07_26810;Dbxref=NCBI_GP:TGD48408.1;Name=TGD48408.1;end_range=994,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456291.1;locus_tag=C9F07_26810;partial=true;product=C4-dicarboxylic acid transporter DauA;protein_id=TGD48408.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001496.1 1 993 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001496.1 Genbank region 1 993 . + . ID=PYKI01001496.1:1..993;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001496.1 Genbank gene 78 993 . - . ID=gene-C9F07_14245;Name=C9F07_14245;end_range=993,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14245;partial=true PYKI01001496.1 Protein Homology CDS 78 993 . - 1 ID=cds-TGD78618.1;Parent=gene-C9F07_14245;Dbxref=NCBI_GP:TGD78618.1;Name=TGD78618.1;end_range=993,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456354.1;locus_tag=C9F07_14245;partial=true;product=MCE family protein;protein_id=TGD78618.1;transl_table=11 ##sequence-region PYKI01000595.1 1 993 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000595.1 Genbank region 1 993 . + . ID=PYKI01000595.1:1..993;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000595.1 Genbank gene 140 880 . - . ID=gene-C9F07_05080;Name=C9F07_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05080 PYKI01000595.1 Protein Homology CDS 140 880 . - 0 ID=cds-TGE14149.1;Parent=gene-C9F07_05080;Dbxref=NCBI_GP:TGE14149.1;Name=TGE14149.1;Note=with GltIKL is involved in the transport of glutamate and aspartate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455233.1;locus_tag=C9F07_05080;product=amino acid ABC transporter permease;protein_id=TGE14149.1;transl_table=11 ##sequence-region PYKI01003199.1 1 992 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003199.1 Genbank region 1 992 . + . ID=PYKI01003199.1:1..992;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003199.1 Genbank pseudogene 1 896 . + . ID=gene-C9F07_32150;Name=C9F07_32150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32150;pseudo=true PYKI01003199.1 Protein Homology CDS 1 896 . + 2 ID=cds-C9F07_32150;Parent=gene-C9F07_32150;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456144.1;locus_tag=C9F07_32150;product=tetrathionate reductase subunit TtrA;pseudo=true;transl_table=11 ##sequence-region PYKI01001116.1 1 991 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001116.1 Genbank region 1 991 . + . ID=PYKI01001116.1:1..991;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001116.1 Genbank gene 1 991 . + . ID=gene-C9F07_10395;Name=C9F07_10395;end_range=991,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10395;partial=true;start_range=.,1 PYKI01001116.1 Protein Homology CDS 1 991 . + 1 ID=cds-TGD94950.1;Parent=gene-C9F07_10395;Dbxref=NCBI_GP:TGD94950.1;Name=TGD94950.1;Note=involved in the transport of lipid A across the inner membrane;end_range=991,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455471.1;locus_tag=C9F07_10395;partial=true;product=lipid ABC transporter permease/ATP-binding protein;protein_id=TGD94950.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001111.1 1 991 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001111.1 Genbank region 1 991 . + . ID=PYKI01001111.1:1..991;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001111.1 Genbank gene 1 278 . + . ID=gene-C9F07_10355;Name=C9F07_10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10355;partial=true;start_range=.,1 PYKI01001111.1 Protein Homology CDS 1 278 . + 2 ID=cds-TGD95085.1;Parent=gene-C9F07_10355;Dbxref=NCBI_GP:TGD95085.1;Name=TGD95085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454659.1;locus_tag=C9F07_10355;partial=true;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=TGD95085.1;start_range=.,1;transl_table=11 PYKI01001111.1 Genbank gene 281 991 . + . ID=gene-C9F07_10360;Name=C9F07_10360;end_range=991,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10360;partial=true PYKI01001111.1 Protein Homology CDS 281 991 . + 0 ID=cds-TGD95086.1;Parent=gene-C9F07_10360;Dbxref=NCBI_GP:TGD95086.1;Name=TGD95086.1;end_range=991,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=C9F07_10360;partial=true;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=TGD95086.1;transl_table=11 ##sequence-region PYKI01001850.1 1 3741 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001850.1 Genbank region 1 3741 . + . ID=PYKI01001850.1:1..3741;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001850.1 Genbank pseudogene 275 370 . - . ID=gene-C9F07_17780;Name=C9F07_17780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17780;pseudo=true PYKI01001850.1 Protein Homology CDS 275 370 . - 0 ID=cds-C9F07_17780;Parent=gene-C9F07_17780;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001406273.1;locus_tag=C9F07_17780;product=holin;pseudo=true;transl_table=11 PYKI01001850.1 Genbank gene 429 854 . - . ID=gene-C9F07_17785;Name=C9F07_17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17785 PYKI01001850.1 Protein Homology CDS 429 854 . - 0 ID=cds-TGD63471.1;Parent=gene-C9F07_17785;Dbxref=NCBI_GP:TGD63471.1;Name=TGD63471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000727929.1;locus_tag=C9F07_17785;product=subtilase cytotoxin subunit B-like protein;protein_id=TGD63471.1;transl_table=11 PYKI01001850.1 Genbank gene 781 1080 . - . ID=gene-C9F07_17790;Name=C9F07_17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17790 PYKI01001850.1 Protein Homology CDS 781 1080 . - 0 ID=cds-TGD63472.1;Parent=gene-C9F07_17790;Dbxref=NCBI_GP:TGD63472.1;Name=TGD63472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001640522.1;locus_tag=C9F07_17790;product=pertussis toxin subunit;protein_id=TGD63472.1;transl_table=11 PYKI01001850.1 Genbank gene 1119 1259 . - . ID=gene-C9F07_17795;Name=C9F07_17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17795 PYKI01001850.1 Protein Homology CDS 1119 1259 . - 0 ID=cds-TGD63473.1;Parent=gene-C9F07_17795;Dbxref=NCBI_GP:TGD63473.1;Name=TGD63473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001605117.1;locus_tag=C9F07_17795;product=pertussis toxin subunit;protein_id=TGD63473.1;transl_table=11 PYKI01001850.1 Genbank gene 1492 1680 . - . ID=gene-C9F07_17800;Name=C9F07_17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17800 PYKI01001850.1 Protein Homology CDS 1492 1680 . - 0 ID=cds-TGD63474.1;Parent=gene-C9F07_17800;Dbxref=NCBI_GP:TGD63474.1;Name=TGD63474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766201.1;locus_tag=C9F07_17800;product=hypothetical protein;protein_id=TGD63474.1;transl_table=11 PYKI01001850.1 Genbank gene 2151 2873 . + . ID=gene-C9F07_17805;Name=C9F07_17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17805 PYKI01001850.1 Protein Homology CDS 2151 2873 . + 0 ID=cds-TGD63475.1;Parent=gene-C9F07_17805;Dbxref=NCBI_GP:TGD63475.1;Name=TGD63475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001605114.1;locus_tag=C9F07_17805;product=hypothetical protein;protein_id=TGD63475.1;transl_table=11 PYKI01001850.1 Genbank gene 3174 3560 . - . ID=gene-C9F07_17810;Name=C9F07_17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17810 PYKI01001850.1 Protein Homology CDS 3174 3560 . - 0 ID=cds-TGD63476.1;Parent=gene-C9F07_17810;Dbxref=NCBI_GP:TGD63476.1;Name=TGD63476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629329.1;locus_tag=C9F07_17810;product=integrase;protein_id=TGD63476.1;transl_table=11 ##sequence-region PYKI01001460.1 1 989 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001460.1 Genbank region 1 989 . + . ID=PYKI01001460.1:1..989;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001460.1 Genbank gene 1 357 . + . ID=gene-C9F07_13855;Name=rnfD;gbkey=Gene;gene=rnfD;gene_biotype=protein_coding;locus_tag=C9F07_13855;partial=true;start_range=.,1 PYKI01001460.1 Protein Homology CDS 1 357 . + 0 ID=cds-TGD82069.1;Parent=gene-C9F07_13855;Dbxref=NCBI_GP:TGD82069.1;Name=TGD82069.1;Note=RnfD%3B RsxD%3B required for nitrogen fixation in Rhodobacter capsulatus%3B part of a membrane-bound complex thought to be involved in electron transport to nitrogenase%3B in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents;gbkey=CDS;gene=rnfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456074.1;locus_tag=C9F07_13855;partial=true;product=electron transport complex subunit RsxD;protein_id=TGD82069.1;start_range=.,1;transl_table=11 PYKI01001460.1 Genbank gene 361 989 . + . ID=gene-C9F07_13860;Name=C9F07_13860;end_range=989,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13860;partial=true PYKI01001460.1 Protein Homology CDS 361 989 . + 0 ID=cds-TGD82070.1;Parent=gene-C9F07_13860;Dbxref=NCBI_GP:TGD82070.1;Name=TGD82070.1;end_range=989,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=C9F07_13860;partial=true;product=electron transport complex subunit RsxG;protein_id=TGD82070.1;transl_table=11 ##sequence-region PYKI01003354.1 1 989 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003354.1 Genbank region 1 989 . + . ID=PYKI01003354.1:1..989;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003354.1 Genbank gene 1 642 . + . ID=gene-C9F07_33785;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=C9F07_33785;partial=true;start_range=.,1 PYKI01003354.1 Protein Homology CDS 1 642 . + 0 ID=cds-TGD35012.1;Parent=gene-C9F07_33785;Dbxref=NCBI_GP:TGD35012.1;Name=TGD35012.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457776.1;locus_tag=C9F07_33785;partial=true;product=twin-arginine translocase subunit TatC;protein_id=TGD35012.1;start_range=.,1;transl_table=11 PYKI01003354.1 Genbank gene 684 989 . + . ID=gene-C9F07_33790;Name=C9F07_33790;end_range=989,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33790;partial=true PYKI01003354.1 Protein Homology CDS 684 989 . + 0 ID=cds-TGD35013.1;Parent=gene-C9F07_33790;Dbxref=NCBI_GP:TGD35013.1;Name=TGD35013.1;Note=magnesium dependent%3B involved in quality control of mutated Tat exported substrates%3B not involved in the Sec-independent protein export system;end_range=989,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457775.1;locus_tag=C9F07_33790;partial=true;product=hydrolase TatD;protein_id=TGD35013.1;transl_table=11 ##sequence-region PYKI01003583.1 1 989 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003583.1 Genbank region 1 989 . + . ID=PYKI01003583.1:1..989;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003583.1 Genbank gene 1 886 . + . ID=gene-C9F07_36160;Name=C9F07_36160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36160;partial=true;start_range=.,1 PYKI01003583.1 Protein Homology CDS 1 886 . + 1 ID=cds-TGD30000.1;Parent=gene-C9F07_36160;Dbxref=NCBI_GP:TGD30000.1;Name=TGD30000.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=C9F07_36160;partial=true;product=ketodeoxygluconokinase;protein_id=TGD30000.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001609.1 1 988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001609.1 Genbank region 1 988 . + . ID=PYKI01001609.1:1..988;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001609.1 Genbank gene 1 343 . - . ID=gene-C9F07_15345;Name=C9F07_15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15345;partial=true;start_range=.,1 PYKI01001609.1 Protein Homology CDS 1 343 . - 0 ID=cds-TGD71037.1;Parent=gene-C9F07_15345;Dbxref=NCBI_GP:TGD71037.1;Name=TGD71037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=C9F07_15345;partial=true;product=LysR family transcriptional regulator;protein_id=TGD71037.1;start_range=.,1;transl_table=11 PYKI01001609.1 Genbank gene 463 988 . + . ID=gene-C9F07_15350;Name=C9F07_15350;end_range=988,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15350;partial=true PYKI01001609.1 Protein Homology CDS 463 988 . + 0 ID=cds-TGD71038.1;Parent=gene-C9F07_15350;Dbxref=NCBI_GP:TGD71038.1;Name=TGD71038.1;end_range=988,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455993.1;locus_tag=C9F07_15350;partial=true;product=MFS transporter;protein_id=TGD71038.1;transl_table=11 ##sequence-region PYKI01002244.1 1 988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002244.1 Genbank region 1 988 . + . ID=PYKI01002244.1:1..988;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002244.1 Genbank pseudogene 1 988 . + . ID=gene-C9F07_21940;Name=metG;gbkey=Gene;gene=metG;gene_biotype=pseudogene;locus_tag=C9F07_21940;pseudo=true PYKI01002244.1 Protein Homology CDS 1 988 . + 2 ID=cds-C9F07_21940;Parent=gene-C9F07_21940;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;gene=metG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456714.1;locus_tag=C9F07_21940;product=methionine--tRNA ligase;pseudo=true;transl_table=11 ##sequence-region PYKI01003051.1 1 988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003051.1 Genbank region 1 988 . + . ID=PYKI01003051.1:1..988;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003051.1 Genbank gene 1 204 . - . ID=gene-C9F07_30605;Name=C9F07_30605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30605;partial=true;start_range=.,1 PYKI01003051.1 Protein Homology CDS 1 204 . - 0 ID=cds-TGD41003.1;Parent=gene-C9F07_30605;Dbxref=NCBI_GP:TGD41003.1;Name=TGD41003.1;Note=with PsbB forms toxin/antitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=C9F07_30605;partial=true;product=envelope stress response membrane protein PspC;protein_id=TGD41003.1;start_range=.,1;transl_table=11 PYKI01003051.1 Genbank gene 204 428 . - . ID=gene-C9F07_30610;Name=C9F07_30610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30610 PYKI01003051.1 Protein Homology CDS 204 428 . - 0 ID=cds-TGD41004.1;Parent=gene-C9F07_30610;Dbxref=NCBI_GP:TGD41004.1;Name=TGD41004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455814.1;locus_tag=C9F07_30610;product=envelope stress response membrane protein PspB;protein_id=TGD41004.1;transl_table=11 PYKI01003051.1 Genbank pseudogene 488 988 . - . ID=gene-C9F07_30615;Name=C9F07_30615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30615;pseudo=true PYKI01003051.1 Protein Homology CDS 488 988 . - 0 ID=cds-C9F07_30615;Parent=gene-C9F07_30615;Note=involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455813.1;locus_tag=C9F07_30615;product=phage shock protein PspA;pseudo=true;transl_table=11 ##sequence-region PYKI01001276.1 1 987 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001276.1 Genbank region 1 987 . + . ID=PYKI01001276.1:1..987;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001276.1 Genbank gene 1 601 . - . ID=gene-C9F07_11950;Name=C9F07_11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11950;partial=true;start_range=.,1 PYKI01001276.1 Protein Homology CDS 1 601 . - 0 ID=cds-TGD88663.1;Parent=gene-C9F07_11950;Dbxref=NCBI_GP:TGD88663.1;Name=TGD88663.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458045.1;locus_tag=C9F07_11950;partial=true;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=TGD88663.1;start_range=.,1;transl_table=11 PYKI01001276.1 Genbank gene 790 987 . - . ID=gene-C9F07_11955;Name=C9F07_11955;end_range=987,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11955;partial=true PYKI01001276.1 Protein Homology CDS 790 987 . - 0 ID=cds-TGD88664.1;Parent=gene-C9F07_11955;Dbxref=NCBI_GP:TGD88664.1;Name=TGD88664.1;end_range=987,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458046.1;locus_tag=C9F07_11955;partial=true;product=GTPase-activating protein;protein_id=TGD88664.1;transl_table=11 ##sequence-region PYKI01001740.1 1 986 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001740.1 Genbank region 1 986 . + . ID=PYKI01001740.1:1..986;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001740.1 Genbank pseudogene 72 986 . - . ID=gene-C9F07_16645;Name=C9F07_16645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16645;pseudo=true PYKI01001740.1 Protein Homology CDS 72 986 . - 0 ID=cds-C9F07_16645;Parent=gene-C9F07_16645;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=C9F07_16645;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01001796.1 1 986 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001796.1 Genbank region 1 986 . + . ID=PYKI01001796.1:1..986;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001796.1 Genbank gene 1 344 . + . ID=gene-C9F07_17285;Name=C9F07_17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17285;partial=true;start_range=.,1 PYKI01001796.1 Protein Homology CDS 1 344 . + 2 ID=cds-TGD66023.1;Parent=gene-C9F07_17285;Dbxref=NCBI_GP:TGD66023.1;Name=TGD66023.1;Note=involved in the transport of nitrate and nitrite;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455920.1;locus_tag=C9F07_17285;partial=true;product=nitrate/nitrite transporter;protein_id=TGD66023.1;start_range=.,1;transl_table=11 PYKI01001796.1 Genbank gene 331 516 . - . ID=gene-C9F07_17290;Name=C9F07_17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17290 PYKI01001796.1 Protein Homology CDS 331 516 . - 0 ID=cds-TGD66024.1;Parent=gene-C9F07_17290;Dbxref=NCBI_GP:TGD66024.1;Name=TGD66024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344064.1;locus_tag=C9F07_17290;product=hypothetical protein;protein_id=TGD66024.1;transl_table=11 PYKI01001796.1 Genbank gene 436 986 . + . ID=gene-C9F07_17295;Name=C9F07_17295;end_range=986,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17295;partial=true PYKI01001796.1 Protein Homology CDS 436 986 . + 0 ID=cds-TGD66025.1;Parent=gene-C9F07_17295;Dbxref=NCBI_GP:TGD66025.1;Name=TGD66025.1;end_range=986,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=C9F07_17295;partial=true;product=nitrate reductase subunit alpha;protein_id=TGD66025.1;transl_table=11 ##sequence-region PYKI01002388.1 1 985 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002388.1 Genbank region 1 985 . + . ID=PYKI01002388.1:1..985;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002388.1 Genbank gene 1 985 . + . ID=gene-C9F07_23505;Name=C9F07_23505;end_range=985,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23505;partial=true;start_range=.,1 PYKI01002388.1 Protein Homology CDS 1 985 . + 2 ID=cds-TGD52219.1;Parent=gene-C9F07_23505;Dbxref=NCBI_GP:TGD52219.1;Name=TGD52219.1;Note=Enables the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation;end_range=985,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=C9F07_23505;partial=true;product=acetate kinase;protein_id=TGD52219.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001095.1 1 984 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001095.1 Genbank region 1 984 . + . ID=PYKI01001095.1:1..984;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001095.1 Genbank gene 1 94 . - . ID=gene-C9F07_10195;Name=C9F07_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10195;partial=true;start_range=.,1 PYKI01001095.1 Protein Homology CDS 1 94 . - 0 ID=cds-TGD95390.1;Parent=gene-C9F07_10195;Dbxref=NCBI_GP:TGD95390.1;Name=TGD95390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456055.1;locus_tag=C9F07_10195;partial=true;product=arginine:ornithine antiporter;protein_id=TGD95390.1;start_range=.,1;transl_table=11 PYKI01001095.1 Genbank pseudogene 93 290 . + . ID=gene-C9F07_10200;Name=C9F07_10200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10200;pseudo=true PYKI01001095.1 Protein Homology CDS 93 290 . + 0 ID=cds-C9F07_10200;Parent=gene-C9F07_10200;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456854.1;locus_tag=C9F07_10200;product=protein ElaB;pseudo=true;transl_table=11 PYKI01001095.1 Genbank gene 392 984 . + . ID=gene-C9F07_10205;Name=C9F07_10205;end_range=984,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10205;partial=true PYKI01001095.1 Protein Homology CDS 392 984 . + 0 ID=cds-TGD95391.1;Parent=gene-C9F07_10205;Dbxref=NCBI_GP:TGD95391.1;Name=TGD95391.1;end_range=984,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=C9F07_10205;partial=true;product=isochorismate synthase MenF;protein_id=TGD95391.1;transl_table=11 ##sequence-region PYKI01003094.1 1 984 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003094.1 Genbank region 1 984 . + . ID=PYKI01003094.1:1..984;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003094.1 Genbank gene 1 787 . - . ID=gene-C9F07_30950;Name=C9F07_30950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30950;partial=true;start_range=.,1 PYKI01003094.1 Protein Homology CDS 1 787 . - 0 ID=cds-TGD40066.1;Parent=gene-C9F07_30950;Dbxref=NCBI_GP:TGD40066.1;Name=TGD40066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=C9F07_30950;partial=true;product=inosine/guanosine kinase;protein_id=TGD40066.1;start_range=.,1;transl_table=11 PYKI01003094.1 Genbank gene 802 984 . + . ID=gene-C9F07_30955;Name=C9F07_30955;end_range=984,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30955;partial=true PYKI01003094.1 Protein Homology CDS 802 984 . + 0 ID=cds-TGD40067.1;Parent=gene-C9F07_30955;Dbxref=NCBI_GP:TGD40067.1;Name=TGD40067.1;end_range=984,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543202.1;locus_tag=C9F07_30955;partial=true;product=acetylesterase;protein_id=TGD40067.1;transl_table=11 ##sequence-region PYKI01000291.1 1 983 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000291.1 Genbank region 1 983 . + . ID=PYKI01000291.1:1..983;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000291.1 Genbank gene 1 510 . + . ID=gene-C9F07_01895;Name=C9F07_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01895;partial=true;start_range=.,1 PYKI01000291.1 Protein Homology CDS 1 510 . + 0 ID=cds-TGE27815.1;Parent=gene-C9F07_01895;Dbxref=NCBI_GP:TGE27815.1;Name=TGE27815.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=C9F07_01895;partial=true;product=amidophosphoribosyltransferase;protein_id=TGE27815.1;start_range=.,1;transl_table=11 PYKI01000291.1 Genbank gene 546 983 . - . ID=gene-C9F07_01900;Name=C9F07_01900;end_range=983,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01900;partial=true PYKI01000291.1 Protein Homology CDS 546 983 . - 0 ID=cds-TGE27816.1;Parent=gene-C9F07_01900;Dbxref=NCBI_GP:TGE27816.1;Name=TGE27816.1;end_range=983,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456903.1;locus_tag=C9F07_01900;partial=true;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=TGE27816.1;transl_table=11 ##sequence-region PYKI01002525.1 1 982 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002525.1 Genbank region 1 982 . + . ID=PYKI01002525.1:1..982;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002525.1 Genbank gene 1 242 . - . ID=gene-C9F07_25055;Name=C9F07_25055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25055;partial=true;start_range=.,1 PYKI01002525.1 Protein Homology CDS 1 242 . - 0 ID=cds-TGD50074.1;Parent=gene-C9F07_25055;Dbxref=NCBI_GP:TGD50074.1;Name=TGD50074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456660.1;locus_tag=C9F07_25055;partial=true;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=TGD50074.1;start_range=.,1;transl_table=11 PYKI01002525.1 Genbank gene 239 727 . - . ID=gene-C9F07_25060;Name=C9F07_25060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25060 PYKI01002525.1 Protein Homology CDS 239 727 . - 0 ID=cds-TGD50075.1;Parent=gene-C9F07_25060;Dbxref=NCBI_GP:TGD50075.1;Name=TGD50075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456661.1;locus_tag=C9F07_25060;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=TGD50075.1;transl_table=11 PYKI01002525.1 Genbank gene 730 982 . - . ID=gene-C9F07_25065;Name=C9F07_25065;end_range=982,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25065;partial=true PYKI01002525.1 Protein Homology CDS 730 982 . - 1 ID=cds-TGD50076.1;Parent=gene-C9F07_25065;Dbxref=NCBI_GP:TGD50076.1;Name=TGD50076.1;end_range=982,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=C9F07_25065;partial=true;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=TGD50076.1;transl_table=11 ##sequence-region PYKI01000621.1 1 981 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000621.1 Genbank region 1 981 . + . ID=PYKI01000621.1:1..981;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000621.1 Genbank gene 1 344 . + . ID=gene-C9F07_05330;Name=C9F07_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05330;partial=true;start_range=.,1 PYKI01000621.1 Protein Homology CDS 1 344 . + 2 ID=cds-TGE13782.1;Parent=gene-C9F07_05330;Dbxref=NCBI_GP:TGE13782.1;Name=TGE13782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457579.1;locus_tag=C9F07_05330;partial=true;product=hypothetical protein;protein_id=TGE13782.1;start_range=.,1;transl_table=11 PYKI01000621.1 Genbank gene 350 981 . + . ID=gene-C9F07_05335;Name=C9F07_05335;end_range=981,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05335;partial=true PYKI01000621.1 Protein Homology CDS 350 981 . + 0 ID=cds-TGE13783.1;Parent=gene-C9F07_05335;Dbxref=NCBI_GP:TGE13783.1;Name=TGE13783.1;end_range=981,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123077.1;locus_tag=C9F07_05335;partial=true;product=hypothetical protein;protein_id=TGE13783.1;transl_table=11 ##sequence-region PYKI01000549.1 1 980 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000549.1 Genbank region 1 980 . + . ID=PYKI01000549.1:1..980;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000549.1 Genbank pseudogene 1 911 . + . ID=gene-C9F07_04580;Name=narZ;gbkey=Gene;gene=narZ;gene_biotype=pseudogene;locus_tag=C9F07_04580;pseudo=true PYKI01000549.1 Protein Homology CDS 1 911 . + 2 ID=cds-C9F07_04580;Parent=gene-C9F07_04580;Note=with NarYV catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli%3B expression of nitrate reductase Z is not dependent on nitrate levels%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=narZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=C9F07_04580;product=nitrate reductase subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKI01001268.1 1 979 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001268.1 Genbank region 1 979 . + . ID=PYKI01001268.1:1..979;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001268.1 Genbank gene 1 686 . + . ID=gene-C9F07_11865;Name=C9F07_11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11865;partial=true;start_range=.,1 PYKI01001268.1 Protein Homology CDS 1 686 . + 2 ID=cds-TGD88768.1;Parent=gene-C9F07_11865;Dbxref=NCBI_GP:TGD88768.1;Name=TGD88768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=C9F07_11865;partial=true;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=TGD88768.1;start_range=.,1;transl_table=11 PYKI01001268.1 Genbank pseudogene 705 899 . + . ID=gene-C9F07_11870;Name=C9F07_11870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11870;pseudo=true PYKI01001268.1 Protein Homology CDS 705 899 . + 0 ID=cds-C9F07_11870;Parent=gene-C9F07_11870;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457493.1;locus_tag=C9F07_11870;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000139.1 1 979 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000139.1 Genbank region 1 979 . + . ID=PYKI01000139.1:1..979;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000139.1 Genbank gene 1 178 . - . ID=gene-C9F07_00945;Name=C9F07_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00945;partial=true;start_range=.,1 PYKI01000139.1 Protein Homology CDS 1 178 . - 0 ID=cds-TGE30083.1;Parent=gene-C9F07_00945;Dbxref=NCBI_GP:TGE30083.1;Name=TGE30083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456222.1;locus_tag=C9F07_00945;partial=true;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=TGE30083.1;start_range=.,1;transl_table=11 PYKI01000139.1 Genbank gene 490 933 . + . ID=gene-C9F07_00950;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=C9F07_00950 PYKI01000139.1 Protein Homology CDS 490 933 . + 0 ID=cds-TGE30084.1;Parent=gene-C9F07_00950;Dbxref=NCBI_GP:TGE30084.1;Name=TGE30084.1;gbkey=CDS;gene=msrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456221.1;locus_tag=C9F07_00950;product=peptide-methionine (R)-S-oxide reductase;protein_id=TGE30084.1;transl_table=11 ##sequence-region PYKI01002214.1 1 3730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002214.1 Genbank region 1 3730 . + . ID=PYKI01002214.1:1..3730;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002214.1 Genbank pseudogene 1 295 . - . ID=gene-C9F07_21570;Name=C9F07_21570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21570;pseudo=true PYKI01002214.1 Protein Homology CDS 1 295 . - 0 ID=cds-C9F07_21570;Parent=gene-C9F07_21570;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458097.1;locus_tag=C9F07_21570;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002214.1 Genbank gene 453 1412 . - . ID=gene-C9F07_21575;Name=C9F07_21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21575 PYKI01002214.1 Protein Homology CDS 453 1412 . - 0 ID=cds-TGD56484.1;Parent=gene-C9F07_21575;Dbxref=NCBI_GP:TGD56484.1;Name=TGD56484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=C9F07_21575;product=transcriptional regulator;protein_id=TGD56484.1;transl_table=11 PYKI01002214.1 Genbank gene 1381 2568 . - . ID=gene-C9F07_21580;Name=C9F07_21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21580 PYKI01002214.1 Protein Homology CDS 1381 2568 . - 0 ID=cds-TGD56485.1;Parent=gene-C9F07_21580;Dbxref=NCBI_GP:TGD56485.1;Name=TGD56485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458099.1;locus_tag=C9F07_21580;product=multidrug transporter MdtL;protein_id=TGD56485.1;transl_table=11 PYKI01002214.1 Genbank gene 2751 3730 . - . ID=gene-C9F07_21585;Name=C9F07_21585;end_range=3730,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21585;partial=true PYKI01002214.1 Protein Homology CDS 2751 3730 . - 2 ID=cds-TGD56486.1;Parent=gene-C9F07_21585;Dbxref=NCBI_GP:TGD56486.1;Name=TGD56486.1;end_range=3730,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=C9F07_21585;partial=true;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=TGD56486.1;transl_table=11 ##sequence-region PYKI01000851.1 1 7705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000851.1 Genbank region 1 7705 . + . ID=PYKI01000851.1:1..7705;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000851.1 Genbank gene 1 809 . - . ID=gene-C9F07_07745;Name=C9F07_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07745;partial=true;start_range=.,1 PYKI01000851.1 Protein Homology CDS 1 809 . - 0 ID=cds-TGE05973.1;Parent=gene-C9F07_07745;Dbxref=NCBI_GP:TGE05973.1;Name=TGE05973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456654.1;locus_tag=C9F07_07745;partial=true;product=colanic acid biosynthesis glycosyltransferase WcaI;protein_id=TGE05973.1;start_range=.,1;transl_table=11 PYKI01000851.1 Genbank gene 806 1279 . - . ID=gene-C9F07_07750;Name=C9F07_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07750 PYKI01000851.1 Protein Homology CDS 806 1279 . - 0 ID=cds-TGE05974.1;Parent=gene-C9F07_07750;Dbxref=NCBI_GP:TGE05974.1;Name=TGE05974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461052.3;locus_tag=C9F07_07750;product=GDP-mannose mannosyl hydrolase;protein_id=TGE05974.1;transl_table=11 PYKI01000851.1 Genbank gene 1282 2247 . - . ID=gene-C9F07_07755;Name=C9F07_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07755 PYKI01000851.1 Protein Homology CDS 1282 2247 . - 0 ID=cds-TGE05979.1;Parent=gene-C9F07_07755;Dbxref=NCBI_GP:TGE05979.1;Name=TGE05979.1;Note=bifunctional GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase%3Bcatalyzes the formation of GDP-fucose from GDP-4-dehydro-6-deoxy-D-mannose;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456656.1;locus_tag=C9F07_07755;product=GDP-L-fucose synthase;protein_id=TGE05979.1;transl_table=11 PYKI01000851.1 Genbank gene 2250 3368 . - . ID=gene-C9F07_07760;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=C9F07_07760 PYKI01000851.1 Protein Homology CDS 2250 3368 . - 0 ID=cds-TGE05975.1;Parent=gene-C9F07_07760;Dbxref=NCBI_GP:TGE05975.1;Name=TGE05975.1;gbkey=CDS;gene=gmd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=C9F07_07760;product=GDP-mannose 4%2C6-dehydratase;protein_id=TGE05975.1;transl_table=11 PYKI01000851.1 Genbank gene 3389 4405 . - . ID=gene-C9F07_07765;Name=C9F07_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07765 PYKI01000851.1 Protein Homology CDS 3389 4405 . - 0 ID=cds-TGE05976.1;Parent=gene-C9F07_07765;Dbxref=NCBI_GP:TGE05976.1;Name=TGE05976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455062.1;locus_tag=C9F07_07765;product=glycosyl transferase;protein_id=TGE05976.1;transl_table=11 PYKI01000851.1 Genbank gene 4427 5440 . - . ID=gene-C9F07_07770;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=C9F07_07770 PYKI01000851.1 Protein Homology CDS 4427 5440 . - 0 ID=cds-TGE05977.1;Parent=gene-C9F07_07770;Dbxref=NCBI_GP:TGE05977.1;Name=TGE05977.1;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000960658.1;locus_tag=C9F07_07770;product=UDP-glucose 4-epimerase GalE;protein_id=TGE05977.1;transl_table=11 PYKI01000851.1 Genbank gene 5779 6672 . - . ID=gene-C9F07_07775;Name=C9F07_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07775 PYKI01000851.1 Protein Homology CDS 5779 6672 . - 0 ID=cds-TGE05978.1;Parent=gene-C9F07_07775;Dbxref=NCBI_GP:TGE05978.1;Name=TGE05978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456647.1;locus_tag=C9F07_07775;product=GalU regulator GalF;protein_id=TGE05978.1;transl_table=11 PYKI01000851.1 Genbank gene 6899 7705 . - . ID=gene-C9F07_07780;Name=C9F07_07780;end_range=7705,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07780;partial=true PYKI01000851.1 Protein Homology CDS 6899 7705 . - 0 ID=cds-TGE05980.1;Parent=gene-C9F07_07780;Dbxref=NCBI_GP:TGE05980.1;Name=TGE05980.1;end_range=7705,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310874.1;locus_tag=C9F07_07780;partial=true;product=UDP-N-acetylglucosamine 4-epimerase;protein_id=TGE05980.1;transl_table=11 ##sequence-region PYKI01000777.1 1 978 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000777.1 Genbank region 1 978 . + . ID=PYKI01000777.1:1..978;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000777.1 Genbank pseudogene 50 628 . + . ID=gene-C9F07_06990;Name=C9F07_06990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06990;pseudo=true PYKI01000777.1 Protein Homology CDS 50 628 . + 0 ID=cds-C9F07_06990;Parent=gene-C9F07_06990;Note=catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455332.1;locus_tag=C9F07_06990;product=urocanate hydratase;pseudo=true;transl_table=11 PYKI01000777.1 Genbank gene 630 978 . + . ID=gene-C9F07_06995;Name=C9F07_06995;end_range=978,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06995;partial=true PYKI01000777.1 Protein Homology CDS 630 978 . + 0 ID=cds-TGE09179.1;Parent=gene-C9F07_06995;Dbxref=NCBI_GP:TGE09179.1;Name=TGE09179.1;Note=catalyzes the degradation of histidine to urocanate and ammmonia;end_range=978,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455333.1;locus_tag=C9F07_06995;partial=true;product=histidine ammonia-lyase;protein_id=TGE09179.1;transl_table=11 ##sequence-region PYKI01001886.1 1 978 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001886.1 Genbank region 1 978 . + . ID=PYKI01001886.1:1..978;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001886.1 Genbank gene 130 978 . - . ID=gene-C9F07_18210;Name=C9F07_18210;end_range=978,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18210;partial=true PYKI01001886.1 Protein Homology CDS 130 978 . - 0 ID=cds-TGD62004.1;Parent=gene-C9F07_18210;Dbxref=NCBI_GP:TGD62004.1;Name=TGD62004.1;end_range=978,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457786.1;locus_tag=C9F07_18210;partial=true;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=TGD62004.1;transl_table=11 ##sequence-region PYKI01002178.1 1 977 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002178.1 Genbank region 1 977 . + . ID=PYKI01002178.1:1..977;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002178.1 Genbank gene 1 187 . + . ID=gene-C9F07_21160;Name=C9F07_21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21160;partial=true;start_range=.,1 PYKI01002178.1 Protein Homology CDS 1 187 . + 1 ID=cds-TGD56828.1;Parent=gene-C9F07_21160;Dbxref=NCBI_GP:TGD56828.1;Name=TGD56828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=C9F07_21160;partial=true;product=hypothetical protein;protein_id=TGD56828.1;start_range=.,1;transl_table=11 PYKI01002178.1 Genbank gene 206 721 . + . ID=gene-C9F07_21165;Name=C9F07_21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21165 PYKI01002178.1 Protein Homology CDS 206 721 . + 0 ID=cds-TGD56829.1;Parent=gene-C9F07_21165;Dbxref=NCBI_GP:TGD56829.1;Name=TGD56829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=C9F07_21165;product=TRAP transporter small permease;protein_id=TGD56829.1;transl_table=11 PYKI01002178.1 Genbank gene 714 977 . + . ID=gene-C9F07_21170;Name=C9F07_21170;end_range=977,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21170;partial=true PYKI01002178.1 Protein Homology CDS 714 977 . + 0 ID=cds-TGD56830.1;Parent=gene-C9F07_21170;Dbxref=NCBI_GP:TGD56830.1;Name=TGD56830.1;end_range=977,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457998.1;locus_tag=C9F07_21170;partial=true;product=hypothetical protein;protein_id=TGD56830.1;transl_table=11 ##sequence-region PYKI01003031.1 1 977 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003031.1 Genbank region 1 977 . + . ID=PYKI01003031.1:1..977;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003031.1 Genbank gene 225 977 . + . ID=gene-C9F07_30430;Name=C9F07_30430;end_range=977,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30430;partial=true PYKI01003031.1 Protein Homology CDS 225 977 . + 0 ID=cds-TGD41080.1;Parent=gene-C9F07_30430;Dbxref=NCBI_GP:TGD41080.1;Name=TGD41080.1;end_range=977,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456607.1;locus_tag=C9F07_30430;partial=true;product=L-threonine kinase;protein_id=TGD41080.1;transl_table=11 ##sequence-region PYKI01000989.1 1 977 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000989.1 Genbank region 1 977 . + . ID=PYKI01000989.1:1..977;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000989.1 Genbank gene 1 648 . - . ID=gene-C9F07_09035;Name=C9F07_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09035;partial=true;start_range=.,1 PYKI01000989.1 Protein Homology CDS 1 648 . - 0 ID=cds-TGD99171.1;Parent=gene-C9F07_09035;Dbxref=NCBI_GP:TGD99171.1;Name=TGD99171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=C9F07_09035;partial=true;product=SLC13 family permease;protein_id=TGD99171.1;start_range=.,1;transl_table=11 PYKI01000989.1 Genbank gene 725 977 . - . ID=gene-C9F07_09040;Name=C9F07_09040;end_range=977,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09040;partial=true PYKI01000989.1 Protein Homology CDS 725 977 . - 1 ID=cds-TGD99172.1;Parent=gene-C9F07_09040;Dbxref=NCBI_GP:TGD99172.1;Name=TGD99172.1;end_range=977,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456876.3;locus_tag=C9F07_09040;partial=true;product=phosphatase;protein_id=TGD99172.1;transl_table=11 ##sequence-region PYKI01001323.1 1 974 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001323.1 Genbank region 1 974 . + . ID=PYKI01001323.1:1..974;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001323.1 Genbank pseudogene 32 974 . - . ID=gene-C9F07_12390;Name=C9F07_12390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12390;pseudo=true PYKI01001323.1 Protein Homology CDS 32 974 . - 1 ID=cds-C9F07_12390;Parent=gene-C9F07_12390;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000763887.1;locus_tag=C9F07_12390;product=helicase;pseudo=true;transl_table=11 ##sequence-region PYKI01001099.1 1 973 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001099.1 Genbank region 1 973 . + . ID=PYKI01001099.1:1..973;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001099.1 Genbank gene 1 361 . - . ID=gene-C9F07_10265;Name=C9F07_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10265;partial=true;start_range=.,1 PYKI01001099.1 Protein Homology CDS 1 361 . - 0 ID=cds-TGD95303.1;Parent=gene-C9F07_10265;Dbxref=NCBI_GP:TGD95303.1;Name=TGD95303.1;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456099.1;locus_tag=C9F07_10265;partial=true;product=superoxide dismutase [Fe];protein_id=TGD95303.1;start_range=.,1;transl_table=11 PYKI01001099.1 Genbank gene 488 973 . - . ID=gene-C9F07_10270;Name=C9F07_10270;end_range=973,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10270;partial=true PYKI01001099.1 Protein Homology CDS 488 973 . - 0 ID=cds-TGD95304.1;Parent=gene-C9F07_10270;Dbxref=NCBI_GP:TGD95304.1;Name=TGD95304.1;end_range=973,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456098.1;locus_tag=C9F07_10270;partial=true;product=hypothetical protein;protein_id=TGD95304.1;transl_table=11 ##sequence-region PYKI01001896.1 1 973 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001896.1 Genbank region 1 973 . + . ID=PYKI01001896.1:1..973;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001896.1 Genbank gene 1 146 . + . ID=gene-C9F07_18280;Name=C9F07_18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18280;partial=true;start_range=.,1 PYKI01001896.1 Protein Homology CDS 1 146 . + 2 ID=cds-TGD61659.1;Parent=gene-C9F07_18280;Dbxref=NCBI_GP:TGD61659.1;Name=TGD61659.1;Note=response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=C9F07_18280;partial=true;product=transcriptional regulator UhpA;protein_id=TGD61659.1;start_range=.,1;transl_table=11 PYKI01001896.1 Genbank gene 146 973 . + . ID=gene-C9F07_18285;Name=C9F07_18285;end_range=973,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18285;partial=true PYKI01001896.1 Protein Homology CDS 146 973 . + 0 ID=cds-TGD61660.1;Parent=gene-C9F07_18285;Dbxref=NCBI_GP:TGD61660.1;Name=TGD61660.1;end_range=973,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458148.1;locus_tag=C9F07_18285;partial=true;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=TGD61660.1;transl_table=11 ##sequence-region PYKI01000533.1 1 971 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000533.1 Genbank region 1 971 . + . ID=PYKI01000533.1:1..971;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000533.1 Genbank pseudogene 88 609 . - . ID=gene-C9F07_04425;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=pseudogene;locus_tag=C9F07_04425;pseudo=true PYKI01000533.1 Protein Homology CDS 88 609 . - 0 ID=cds-C9F07_04425;Parent=gene-C9F07_04425;Note=with PduCE catalyzes the formation of propionaldehyde from 1%2C2-propanediol%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=C9F07_04425;product=propanediol dehydratase;pseudo=true;transl_table=11 PYKI01000533.1 Genbank pseudogene 620 901 . - . ID=gene-C9F07_04430;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=pseudogene;locus_tag=C9F07_04430;pseudo=true PYKI01000533.1 Protein Homology CDS 620 901 . - 0 ID=cds-C9F07_04430;Parent=gene-C9F07_04430;Note=with pduED catalyzes the formation of propionaldehyde from 1%2C2-propanediol%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456590.1;locus_tag=C9F07_04430;product=propanediol dehydratase;pseudo=true;transl_table=11 ##sequence-region PYKI01002579.1 1 970 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002579.1 Genbank region 1 970 . + . ID=PYKI01002579.1:1..970;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002579.1 Genbank pseudogene 1 892 . - . ID=gene-C9F07_25610;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=pseudogene;locus_tag=C9F07_25610;pseudo=true PYKI01002579.1 Protein Homology CDS 1 892 . - 0 ID=cds-C9F07_25610;Parent=gene-C9F07_25610;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=chiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455248.1;locus_tag=C9F07_25610;product=chitoporin;pseudo=true;transl_table=11 ##sequence-region PYKI01000796.1 1 3726 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000796.1 Genbank region 1 3726 . + . ID=PYKI01000796.1:1..3726;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000796.1 Genbank gene 1 441 . - . ID=gene-C9F07_07150;Name=C9F07_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07150;partial=true;start_range=.,1 PYKI01000796.1 Protein Homology CDS 1 441 . - 0 ID=cds-TGE09150.1;Parent=gene-C9F07_07150;Dbxref=NCBI_GP:TGE09150.1;Name=TGE09150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457999.1;locus_tag=C9F07_07150;partial=true;product=hypothetical protein;protein_id=TGE09150.1;start_range=.,1;transl_table=11 PYKI01000796.1 Genbank gene 1061 2095 . + . ID=gene-C9F07_07155;Name=C9F07_07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07155 PYKI01000796.1 Protein Homology CDS 1061 2095 . + 0 ID=cds-TGE09146.1;Parent=gene-C9F07_07155;Dbxref=NCBI_GP:TGE09146.1;Name=TGE09146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=C9F07_07155;product=L-rhamnose/proton symporter RhaT;protein_id=TGE09146.1;transl_table=11 PYKI01000796.1 Genbank gene 2092 2940 . - . ID=gene-C9F07_07160;Name=C9F07_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07160 PYKI01000796.1 Protein Homology CDS 2092 2940 . - 0 ID=cds-TGE09147.1;Parent=gene-C9F07_07160;Dbxref=NCBI_GP:TGE09147.1;Name=TGE09147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=C9F07_07160;product=HTH-type transcriptional activator RhaR;protein_id=TGE09147.1;transl_table=11 PYKI01000796.1 Genbank gene 2963 3145 . + . ID=gene-C9F07_07165;Name=C9F07_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07165 PYKI01000796.1 Protein Homology CDS 2963 3145 . + 0 ID=cds-TGE09148.1;Parent=gene-C9F07_07165;Dbxref=NCBI_GP:TGE09148.1;Name=TGE09148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133896.1;locus_tag=C9F07_07165;product=hypothetical protein;protein_id=TGE09148.1;transl_table=11 PYKI01000796.1 Genbank gene 3093 3726 . - . ID=gene-C9F07_07170;Name=C9F07_07170;end_range=3726,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07170;partial=true PYKI01000796.1 Protein Homology CDS 3093 3726 . - 1 ID=cds-TGE09149.1;Parent=gene-C9F07_07170;Dbxref=NCBI_GP:TGE09149.1;Name=TGE09149.1;end_range=3726,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458002.1;locus_tag=C9F07_07170;partial=true;product=HTH-type transcriptional activator RhaS;protein_id=TGE09149.1;transl_table=11 ##sequence-region PYKI01000344.1 1 969 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000344.1 Genbank region 1 969 . + . ID=PYKI01000344.1:1..969;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000344.1 Genbank gene 1 826 . + . ID=gene-C9F07_02545;Name=C9F07_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02545;partial=true;start_range=.,1 PYKI01000344.1 Protein Homology CDS 1 826 . + 1 ID=cds-TGE26830.1;Parent=gene-C9F07_02545;Dbxref=NCBI_GP:TGE26830.1;Name=TGE26830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457353.1;locus_tag=C9F07_02545;partial=true;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=TGE26830.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001351.1 1 969 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001351.1 Genbank region 1 969 . + . ID=PYKI01001351.1:1..969;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001351.1 Genbank gene 77 232 . - . ID=gene-C9F07_12675;Name=C9F07_12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12675 PYKI01001351.1 Protein Homology CDS 77 232 . - 0 ID=cds-TGD85231.1;Parent=gene-C9F07_12675;Dbxref=NCBI_GP:TGD85231.1;Name=TGD85231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000415762.1;locus_tag=C9F07_12675;product=hypothetical protein;protein_id=TGD85231.1;transl_table=11 PYKI01001351.1 Genbank gene 644 969 . + . ID=gene-C9F07_12680;Name=C9F07_12680;end_range=969,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12680;partial=true PYKI01001351.1 Protein Homology CDS 644 969 . + 0 ID=cds-TGD85232.1;Parent=gene-C9F07_12680;Dbxref=NCBI_GP:TGD85232.1;Name=TGD85232.1;end_range=969,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176636.1;locus_tag=C9F07_12680;partial=true;product=LysR family transcriptional regulator;protein_id=TGD85232.1;transl_table=11 ##sequence-region PYKI01002878.1 1 969 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002878.1 Genbank region 1 969 . + . ID=PYKI01002878.1:1..969;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002878.1 Genbank pseudogene 18 341 . - . ID=gene-C9F07_28830;Name=C9F07_28830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28830;pseudo=true PYKI01002878.1 Protein Homology CDS 18 341 . - 0 ID=cds-C9F07_28830;Parent=gene-C9F07_28830;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454739.1;locus_tag=C9F07_28830;product=cell division protein FtsW;pseudo=true;transl_table=11 PYKI01002878.1 Genbank gene 341 969 . - . ID=gene-C9F07_28835;Name=murD;end_range=969,.;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=C9F07_28835;partial=true PYKI01002878.1 Protein Homology CDS 341 969 . - 2 ID=cds-TGD44478.1;Parent=gene-C9F07_28835;Dbxref=NCBI_GP:TGD44478.1;Name=TGD44478.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;end_range=969,.;gbkey=CDS;gene=murD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=C9F07_28835;partial=true;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=TGD44478.1;transl_table=11 ##sequence-region PYKI01001489.1 1 969 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001489.1 Genbank region 1 969 . + . ID=PYKI01001489.1:1..969;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001489.1 Genbank gene 1 93 . - . ID=gene-C9F07_14180;Name=C9F07_14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14180;partial=true;start_range=.,1 PYKI01001489.1 Protein Homology CDS 1 93 . - 0 ID=cds-TGD79207.1;Parent=gene-C9F07_14180;Dbxref=NCBI_GP:TGD79207.1;Name=TGD79207.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455649.1;locus_tag=C9F07_14180;partial=true;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=TGD79207.1;start_range=.,1;transl_table=11 PYKI01001489.1 Genbank gene 313 969 . + . ID=gene-C9F07_14185;Name=C9F07_14185;end_range=969,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14185;partial=true PYKI01001489.1 Protein Homology CDS 313 969 . + 0 ID=cds-TGD79208.1;Parent=gene-C9F07_14185;Dbxref=NCBI_GP:TGD79208.1;Name=TGD79208.1;end_range=969,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=C9F07_14185;partial=true;product=hypothetical protein;protein_id=TGD79208.1;transl_table=11 ##sequence-region PYKI01001398.1 1 968 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001398.1 Genbank region 1 968 . + . ID=PYKI01001398.1:1..968;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001398.1 Genbank gene 1 354 . + . ID=gene-C9F07_13225;Name=C9F07_13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13225;partial=true;start_range=.,1 PYKI01001398.1 Protein Homology CDS 1 354 . + 0 ID=cds-TGD84043.1;Parent=gene-C9F07_13225;Dbxref=NCBI_GP:TGD84043.1;Name=TGD84043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=C9F07_13225;partial=true;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=TGD84043.1;start_range=.,1;transl_table=11 PYKI01001398.1 Genbank gene 480 968 . + . ID=gene-C9F07_13230;Name=panC;end_range=968,.;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=C9F07_13230;partial=true PYKI01001398.1 Protein Homology CDS 480 968 . + 0 ID=cds-TGD84044.1;Parent=gene-C9F07_13230;Dbxref=NCBI_GP:TGD84044.1;Name=TGD84044.1;end_range=968,.;gbkey=CDS;gene=panC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454790.1;locus_tag=C9F07_13230;partial=true;product=pantoate--beta-alanine ligase;protein_id=TGD84044.1;transl_table=11 ##sequence-region PYKI01003589.1 1 967 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003589.1 Genbank region 1 967 . + . ID=PYKI01003589.1:1..967;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003589.1 Genbank gene 1 967 . - . ID=gene-C9F07_36205;Name=C9F07_36205;end_range=967,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36205;partial=true;start_range=.,1 PYKI01003589.1 Protein Homology CDS 1 967 . - 1 ID=cds-TGD29831.1;Parent=gene-C9F07_36205;Dbxref=NCBI_GP:TGD29831.1;Name=TGD29831.1;end_range=967,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=C9F07_36205;partial=true;product=glutamine-hydrolyzing GMP synthase;protein_id=TGD29831.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001334.1 1 967 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001334.1 Genbank region 1 967 . + . ID=PYKI01001334.1:1..967;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001334.1 Genbank gene 96 967 . + . ID=gene-C9F07_12460;Name=C9F07_12460;end_range=967,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12460;partial=true PYKI01001334.1 Protein Homology CDS 96 967 . + 0 ID=cds-TGD85774.1;Parent=gene-C9F07_12460;Dbxref=NCBI_GP:TGD85774.1;Name=TGD85774.1;end_range=967,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=C9F07_12460;partial=true;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=TGD85774.1;transl_table=11 ##sequence-region PYKI01003001.1 1 966 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003001.1 Genbank region 1 966 . + . ID=PYKI01003001.1:1..966;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003001.1 Genbank pseudogene 89 966 . + . ID=gene-C9F07_30095;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=pseudogene;locus_tag=C9F07_30095;pseudo=true PYKI01003001.1 Protein Homology CDS 89 966 . + 0 ID=cds-C9F07_30095;Parent=gene-C9F07_30095;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459719.1;locus_tag=C9F07_30095;product=succinate dehydrogenase flavoprotein subunit;pseudo=true;transl_table=11 ##sequence-region PYKI01002644.1 1 966 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002644.1 Genbank region 1 966 . + . ID=PYKI01002644.1:1..966;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002644.1 Genbank gene 1 966 . - . ID=gene-C9F07_26345;Name=C9F07_26345;end_range=966,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26345;partial=true;start_range=.,1 PYKI01002644.1 Protein Homology CDS 1 966 . - 1 ID=cds-TGD49388.1;Parent=gene-C9F07_26345;Dbxref=NCBI_GP:TGD49388.1;Name=TGD49388.1;end_range=966,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455413.1;locus_tag=C9F07_26345;partial=true;product=sulfatase;protein_id=TGD49388.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001155.1 1 3708 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001155.1 Genbank region 1 3708 . + . ID=PYKI01001155.1:1..3708;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001155.1 Genbank gene 187 624 . + . ID=gene-C9F07_10785;Name=C9F07_10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10785 PYKI01001155.1 Protein Homology CDS 187 624 . + 0 ID=cds-TGD93577.1;Parent=gene-C9F07_10785;Dbxref=NCBI_GP:TGD93577.1;Name=TGD93577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454758.1;locus_tag=C9F07_10785;product=prepilin peptidase-dependent pilin;protein_id=TGD93577.1;transl_table=11 PYKI01001155.1 Genbank gene 634 2019 . + . ID=gene-C9F07_10790;Name=C9F07_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10790 PYKI01001155.1 Protein Homology CDS 634 2019 . + 0 ID=cds-TGD93578.1;Parent=gene-C9F07_10790;Dbxref=NCBI_GP:TGD93578.1;Name=TGD93578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=C9F07_10790;product=type II secretion system protein GspE;protein_id=TGD93578.1;transl_table=11 PYKI01001155.1 Genbank gene 2009 3211 . + . ID=gene-C9F07_10795;Name=C9F07_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10795 PYKI01001155.1 Protein Homology CDS 2009 3211 . + 0 ID=cds-TGD93579.1;Parent=gene-C9F07_10795;Dbxref=NCBI_GP:TGD93579.1;Name=TGD93579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=C9F07_10795;product=type IV pilin biogenesis protein;protein_id=TGD93579.1;transl_table=11 PYKI01001155.1 Genbank pseudogene 3242 3634 . - . ID=gene-C9F07_10800;Name=C9F07_10800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10800;pseudo=true PYKI01001155.1 Protein Homology CDS 3242 3634 . - 0 ID=cds-C9F07_10800;Parent=gene-C9F07_10800;Note=catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454755.1;locus_tag=C9F07_10800;product=GMP reductase;pseudo=true;transl_table=11 ##sequence-region PYKI01000869.1 1 966 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000869.1 Genbank region 1 966 . + . ID=PYKI01000869.1:1..966;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000869.1 Genbank gene 1 142 . + . ID=gene-C9F07_07985;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=C9F07_07985;partial=true;start_range=.,1 PYKI01000869.1 Protein Homology CDS 1 142 . + 1 ID=cds-TGE05071.1;Parent=gene-C9F07_07985;Dbxref=NCBI_GP:TGE05071.1;Name=TGE05071.1;Note=similar to release factor 1 and 2;gbkey=CDS;gene=prfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454927.1;locus_tag=C9F07_07985;partial=true;product=peptide chain release factor H;protein_id=TGE05071.1;start_range=.,1;transl_table=11 PYKI01000869.1 Genbank gene 297 966 . - . ID=gene-C9F07_07990;Name=C9F07_07990;end_range=966,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07990;partial=true PYKI01000869.1 Protein Homology CDS 297 966 . - 1 ID=cds-TGE05072.1;Parent=gene-C9F07_07990;Dbxref=NCBI_GP:TGE05072.1;Name=TGE05072.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;end_range=966,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=C9F07_07990;partial=true;product=cytosol nonspecific dipeptidase;protein_id=TGE05072.1;transl_table=11 ##sequence-region PYKI01000629.1 1 966 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000629.1 Genbank region 1 966 . + . ID=PYKI01000629.1:1..966;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000629.1 Genbank gene 1 966 . - . ID=gene-C9F07_05425;Name=C9F07_05425;end_range=966,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05425;partial=true;start_range=.,1 PYKI01000629.1 Protein Homology CDS 1 966 . - 2 ID=cds-TGE13415.1;Parent=gene-C9F07_05425;Dbxref=NCBI_GP:TGE13415.1;Name=TGE13415.1;Note=sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA;end_range=966,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457707.1;locus_tag=C9F07_05425;partial=true;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=TGE13415.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001298.1 1 966 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001298.1 Genbank region 1 966 . + . ID=PYKI01001298.1:1..966;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001298.1 Genbank gene 1 864 . - . ID=gene-C9F07_12155;Name=C9F07_12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12155;partial=true;start_range=.,1 PYKI01001298.1 Protein Homology CDS 1 864 . - 0 ID=cds-TGD87196.1;Parent=gene-C9F07_12155;Dbxref=NCBI_GP:TGD87196.1;Name=TGD87196.1;Note=involved in the transport or adenine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=C9F07_12155;partial=true;product=adenine permease PurP;protein_id=TGD87196.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002202.1 1 964 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002202.1 Genbank region 1 964 . + . ID=PYKI01002202.1:1..964;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002202.1 Genbank gene 160 964 . - . ID=gene-C9F07_21425;Name=C9F07_21425;end_range=964,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21425;partial=true PYKI01002202.1 Protein Homology CDS 160 964 . - 1 ID=cds-TGD56527.1;Parent=gene-C9F07_21425;Dbxref=NCBI_GP:TGD56527.1;Name=TGD56527.1;end_range=964,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=C9F07_21425;partial=true;product=mechanosensitive channel protein;protein_id=TGD56527.1;transl_table=11 ##sequence-region PYKI01001655.1 1 963 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001655.1 Genbank region 1 963 . + . ID=PYKI01001655.1:1..963;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001655.1 Genbank gene 1 335 . + . ID=gene-C9F07_15800;Name=C9F07_15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15800;partial=true;start_range=.,1 PYKI01001655.1 Protein Homology CDS 1 335 . + 2 ID=cds-TGD70218.1;Parent=gene-C9F07_15800;Dbxref=NCBI_GP:TGD70218.1;Name=TGD70218.1;Note=catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate%3B also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=C9F07_15800;partial=true;product=2-methylcitrate synthase;protein_id=TGD70218.1;start_range=.,1;transl_table=11 PYKI01001655.1 Genbank gene 375 963 . + . ID=gene-C9F07_15805;Name=C9F07_15805;end_range=963,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15805;partial=true PYKI01001655.1 Protein Homology CDS 375 963 . + 0 ID=cds-TGD70219.1;Parent=gene-C9F07_15805;Dbxref=NCBI_GP:TGD70219.1;Name=TGD70219.1;end_range=963,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=C9F07_15805;partial=true;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=TGD70219.1;transl_table=11 ##sequence-region PYKI01001157.1 1 963 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001157.1 Genbank region 1 963 . + . ID=PYKI01001157.1:1..963;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001157.1 Genbank gene 1 478 . + . ID=gene-C9F07_10810;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=C9F07_10810;partial=true;start_range=.,1 PYKI01001157.1 Protein Homology CDS 1 478 . + 1 ID=cds-TGD93575.1;Parent=gene-C9F07_10810;Dbxref=NCBI_GP:TGD93575.1;Name=TGD93575.1;gbkey=CDS;gene=caiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454681.1;locus_tag=C9F07_10810;partial=true;product=crotonobetaine/carnitine-CoA ligase;protein_id=TGD93575.1;start_range=.,1;transl_table=11 PYKI01001157.1 Genbank gene 532 963 . + . ID=gene-C9F07_10815;Name=C9F07_10815;end_range=963,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10815;partial=true PYKI01001157.1 Protein Homology CDS 532 963 . + 0 ID=cds-TGD93576.1;Parent=gene-C9F07_10815;Dbxref=NCBI_GP:TGD93576.1;Name=TGD93576.1;Note=catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA;end_range=963,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454680.1;locus_tag=C9F07_10815;partial=true;product=carnitinyl-CoA dehydratase;protein_id=TGD93576.1;transl_table=11 ##sequence-region PYKI01003486.1 1 962 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003486.1 Genbank region 1 962 . + . ID=PYKI01003486.1:1..962;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003486.1 Genbank gene 149 962 . - . ID=gene-C9F07_35085;Name=C9F07_35085;end_range=962,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35085;partial=true PYKI01003486.1 Protein Homology CDS 149 962 . - 1 ID=cds-TGD32482.1;Parent=gene-C9F07_35085;Dbxref=NCBI_GP:TGD32482.1;Name=TGD32482.1;end_range=962,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456989.1;locus_tag=C9F07_35085;partial=true;product=HTH-type transcriptional regulator EutR;protein_id=TGD32482.1;transl_table=11 ##sequence-region PYKI01002889.1 1 962 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002889.1 Genbank region 1 962 . + . ID=PYKI01002889.1:1..962;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002889.1 Genbank gene 1 284 . + . ID=gene-C9F07_28930;Name=C9F07_28930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28930;partial=true;start_range=.,1 PYKI01002889.1 Protein Homology CDS 1 284 . + 2 ID=cds-TGD44033.1;Parent=gene-C9F07_28930;Dbxref=NCBI_GP:TGD44033.1;Name=TGD44033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455088.1;locus_tag=C9F07_28930;partial=true;product=hypothetical protein;protein_id=TGD44033.1;start_range=.,1;transl_table=11 PYKI01002889.1 Genbank gene 333 962 . - . ID=gene-C9F07_28935;Name=C9F07_28935;end_range=962,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28935;partial=true PYKI01002889.1 Protein Homology CDS 333 962 . - 0 ID=cds-TGD44034.1;Parent=gene-C9F07_28935;Dbxref=NCBI_GP:TGD44034.1;Name=TGD44034.1;Note=catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP;end_range=962,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455087.1;locus_tag=C9F07_28935;partial=true;product=inosine/guanosine kinase;protein_id=TGD44034.1;transl_table=11 ##sequence-region PYKI01002897.1 1 962 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002897.1 Genbank region 1 962 . + . ID=PYKI01002897.1:1..962;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002897.1 Genbank gene 117 962 . + . ID=gene-C9F07_29015;Name=C9F07_29015;end_range=962,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29015;partial=true PYKI01002897.1 Protein Homology CDS 117 962 . + 0 ID=cds-TGD44005.1;Parent=gene-C9F07_29015;Dbxref=NCBI_GP:TGD44005.1;Name=TGD44005.1;end_range=962,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455609.1;locus_tag=C9F07_29015;partial=true;product=protein-disulfide reductase;protein_id=TGD44005.1;transl_table=11 ##sequence-region PYKI01001147.1 1 3677 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001147.1 Genbank region 1 3677 . + . ID=PYKI01001147.1:1..3677;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001147.1 Genbank gene 93 644 . - . ID=gene-C9F07_10690;Name=C9F07_10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10690 PYKI01001147.1 Protein Homology CDS 93 644 . - 0 ID=cds-TGD93895.1;Parent=gene-C9F07_10690;Dbxref=NCBI_GP:TGD93895.1;Name=TGD93895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=C9F07_10690;product=fimbrial protein StiA;protein_id=TGD93895.1;transl_table=11 PYKI01001147.1 Genbank gene 1010 1450 . + . ID=gene-C9F07_10695;Name=C9F07_10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10695 PYKI01001147.1 Protein Homology CDS 1010 1450 . + 0 ID=cds-TGD93896.1;Parent=gene-C9F07_10695;Dbxref=NCBI_GP:TGD93896.1;Name=TGD93896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454787.1;locus_tag=C9F07_10695;product=PTS sugar transporter subunit IIA;protein_id=TGD93896.1;transl_table=11 PYKI01001147.1 Genbank gene 1512 2741 . + . ID=gene-C9F07_10700;Name=C9F07_10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10700 PYKI01001147.1 Protein Homology CDS 1512 2741 . + 0 ID=cds-TGD93897.1;Parent=gene-C9F07_10700;Dbxref=NCBI_GP:TGD93897.1;Name=TGD93897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=C9F07_10700;product=polysaccharide deacetylase family protein;protein_id=TGD93897.1;transl_table=11 PYKI01001147.1 Genbank gene 2748 3128 . - . ID=gene-C9F07_10705;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=C9F07_10705 PYKI01001147.1 Protein Homology CDS 2748 3128 . - 0 ID=cds-TGD93898.1;Parent=gene-C9F07_10705;Dbxref=NCBI_GP:TGD93898.1;Name=TGD93898.1;gbkey=CDS;gene=panD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=C9F07_10705;product=aspartate 1-decarboxylase;protein_id=TGD93898.1;transl_table=11 PYKI01001147.1 Genbank gene 3223 3677 . - . ID=gene-C9F07_10710;Name=panC;end_range=3677,.;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=C9F07_10710;partial=true PYKI01001147.1 Protein Homology CDS 3223 3677 . - 2 ID=cds-TGD93899.1;Parent=gene-C9F07_10710;Dbxref=NCBI_GP:TGD93899.1;Name=TGD93899.1;Note=catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine;end_range=3677,.;gbkey=CDS;gene=panC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=C9F07_10710;partial=true;product=pantoate--beta-alanine ligase;protein_id=TGD93899.1;transl_table=11 ##sequence-region PYKI01003127.1 1 962 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003127.1 Genbank region 1 962 . + . ID=PYKI01003127.1:1..962;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003127.1 Genbank gene 1 180 . + . ID=gene-C9F07_31310;Name=C9F07_31310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31310;partial=true;start_range=.,1 PYKI01003127.1 Protein Homology CDS 1 180 . + 0 ID=cds-TGD39144.1;Parent=gene-C9F07_31310;Dbxref=NCBI_GP:TGD39144.1;Name=TGD39144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454767.1;locus_tag=C9F07_31310;partial=true;product=hypothetical protein;protein_id=TGD39144.1;start_range=.,1;transl_table=11 PYKI01003127.1 Genbank gene 381 962 . + . ID=gene-C9F07_31315;Name=C9F07_31315;end_range=962,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31315;partial=true PYKI01003127.1 Protein Homology CDS 381 962 . + 0 ID=cds-TGD39145.1;Parent=gene-C9F07_31315;Dbxref=NCBI_GP:TGD39145.1;Name=TGD39145.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;end_range=962,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=C9F07_31315;partial=true;product=dihydrolipoyl dehydrogenase;protein_id=TGD39145.1;transl_table=11 ##sequence-region PYKI01001063.1 1 959 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001063.1 Genbank region 1 959 . + . ID=PYKI01001063.1:1..959;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001063.1 Genbank gene 1 156 . + . ID=gene-C9F07_09795;Name=C9F07_09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09795;partial=true;start_range=.,1 PYKI01001063.1 Protein Homology CDS 1 156 . + 0 ID=cds-TGD96120.1;Parent=gene-C9F07_09795;Dbxref=NCBI_GP:TGD96120.1;Name=TGD96120.1;Note=activates the transcription of the lysA gene encoding diaminopimelate decarboxylase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457409.1;locus_tag=C9F07_09795;partial=true;product=LysR family transcriptional regulator;protein_id=TGD96120.1;start_range=.,1;transl_table=11 PYKI01001063.1 Genbank gene 128 835 . - . ID=gene-C9F07_09800;Name=C9F07_09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09800 PYKI01001063.1 Protein Homology CDS 128 835 . - 0 ID=cds-TGD96121.1;Parent=gene-C9F07_09800;Dbxref=NCBI_GP:TGD96121.1;Name=TGD96121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457410.1;locus_tag=C9F07_09800;product=aspartate/glutamate racemase;protein_id=TGD96121.1;transl_table=11 ##sequence-region PYKI01001236.1 1 958 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001236.1 Genbank region 1 958 . + . ID=PYKI01001236.1:1..958;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001236.1 Genbank pseudogene 1 704 . - . ID=gene-C9F07_11540;Name=C9F07_11540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11540;pseudo=true PYKI01001236.1 Protein Homology CDS 1 704 . - 0 ID=cds-C9F07_11540;Parent=gene-C9F07_11540;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457182.1;locus_tag=C9F07_11540;product=histidine kinase;pseudo=true;transl_table=11 PYKI01001236.1 Genbank gene 691 958 . - . ID=gene-C9F07_11545;Name=C9F07_11545;end_range=958,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11545;partial=true PYKI01001236.1 Protein Homology CDS 691 958 . - 1 ID=cds-TGD90934.1;Parent=gene-C9F07_11545;Dbxref=NCBI_GP:TGD90934.1;Name=TGD90934.1;Note=transcriptional activator of tricarboxylate transport system genes;end_range=958,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457183.1;locus_tag=C9F07_11545;partial=true;product=DNA-binding response regulator;protein_id=TGD90934.1;transl_table=11 ##sequence-region PYKI01002421.1 1 957 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002421.1 Genbank region 1 957 . + . ID=PYKI01002421.1:1..957;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002421.1 Genbank gene 1 690 . + . ID=gene-C9F07_23930;Name=C9F07_23930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23930;partial=true;start_range=.,1 PYKI01002421.1 Protein Homology CDS 1 690 . + 0 ID=cds-TGD51489.1;Parent=gene-C9F07_23930;Dbxref=NCBI_GP:TGD51489.1;Name=TGD51489.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=C9F07_23930;partial=true;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=TGD51489.1;start_range=.,1;transl_table=11 PYKI01002421.1 Genbank pseudogene 653 882 . - . ID=gene-C9F07_23935;Name=C9F07_23935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23935;pseudo=true PYKI01002421.1 Protein Homology CDS 653 882 . - 0 ID=cds-C9F07_23935;Parent=gene-C9F07_23935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001597211.1;locus_tag=C9F07_23935;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002421.1 Genbank gene 845 957 . + . ID=gene-C9F07_23940;Name=C9F07_23940;end_range=957,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23940;partial=true PYKI01002421.1 Protein Homology CDS 845 957 . + 0 ID=cds-TGD51490.1;Parent=gene-C9F07_23940;Dbxref=NCBI_GP:TGD51490.1;Name=TGD51490.1;end_range=957,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455648.1;locus_tag=C9F07_23940;partial=true;product=MFS transporter;protein_id=TGD51490.1;transl_table=11 ##sequence-region PYKI01000315.1 1 956 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000315.1 Genbank region 1 956 . + . ID=PYKI01000315.1:1..956;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000315.1 Genbank pseudogene 1 762 . + . ID=gene-C9F07_02155;Name=murF;gbkey=Gene;gene=murF;gene_biotype=pseudogene;locus_tag=C9F07_02155;pseudo=true PYKI01000315.1 Protein Homology CDS 1 762 . + 0 ID=cds-C9F07_02155;Parent=gene-C9F07_02155;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=murF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454736.1;locus_tag=C9F07_02155;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;pseudo=true;transl_table=11 PYKI01000315.1 Genbank gene 756 956 . + . ID=gene-C9F07_02160;Name=C9F07_02160;end_range=956,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02160;partial=true PYKI01000315.1 Protein Homology CDS 756 956 . + 0 ID=cds-TGE27768.1;Parent=gene-C9F07_02160;Dbxref=NCBI_GP:TGE27768.1;Name=TGE27768.1;end_range=956,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=C9F07_02160;partial=true;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=TGE27768.1;transl_table=11 ##sequence-region PYKI01001975.1 1 956 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001975.1 Genbank region 1 956 . + . ID=PYKI01001975.1:1..956;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001975.1 Genbank pseudogene 1 880 . - . ID=gene-C9F07_19045;Name=C9F07_19045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19045;pseudo=true PYKI01001975.1 Protein Homology CDS 1 880 . - 0 ID=cds-C9F07_19045;Parent=gene-C9F07_19045;Note=Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=C9F07_19045;product=transcriptional regulator MalT;pseudo=true;transl_table=11 ##sequence-region PYKI01002584.1 1 956 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002584.1 Genbank region 1 956 . + . ID=PYKI01002584.1:1..956;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002584.1 Genbank gene 163 956 . - . ID=gene-C9F07_25650;Name=C9F07_25650;end_range=956,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25650;partial=true PYKI01002584.1 Protein Homology CDS 163 956 . - 2 ID=cds-TGD49717.1;Parent=gene-C9F07_25650;Dbxref=NCBI_GP:TGD49717.1;Name=TGD49717.1;end_range=956,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458585.1;locus_tag=C9F07_25650;partial=true;product=lipid A hydroxylase LpxO;protein_id=TGD49717.1;transl_table=11 ##sequence-region PYKI01003130.1 1 954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003130.1 Genbank region 1 954 . + . ID=PYKI01003130.1:1..954;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003130.1 Genbank gene 1 555 . - . ID=gene-C9F07_31335;Name=C9F07_31335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31335;partial=true;start_range=.,1 PYKI01003130.1 Protein Homology CDS 1 555 . - 0 ID=cds-TGD38955.1;Parent=gene-C9F07_31335;Dbxref=NCBI_GP:TGD38955.1;Name=TGD38955.1;Note=is involved in outer membrane permeability;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454705.1;locus_tag=C9F07_31335;partial=true;product=LPS-assembly protein LptD;protein_id=TGD38955.1;start_range=.,1;transl_table=11 PYKI01003130.1 Genbank gene 809 954 . + . ID=gene-C9F07_31340;Name=djlA;end_range=954,.;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=C9F07_31340;partial=true PYKI01003130.1 Protein Homology CDS 809 954 . + 0 ID=cds-TGD38956.1;Parent=gene-C9F07_31340;Dbxref=NCBI_GP:TGD38956.1;Name=TGD38956.1;Note=functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system;end_range=954,.;gbkey=CDS;gene=djlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454706.1;locus_tag=C9F07_31340;partial=true;product=molecular chaperone DjlA;protein_id=TGD38956.1;transl_table=11 ##sequence-region PYKI01001842.1 1 954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001842.1 Genbank region 1 954 . + . ID=PYKI01001842.1:1..954;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001842.1 Genbank gene 1 412 . - . ID=gene-C9F07_17705;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=C9F07_17705;partial=true;start_range=.,1 PYKI01001842.1 Protein Homology CDS 1 412 . - 0 ID=cds-TGD63783.1;Parent=gene-C9F07_17705;Dbxref=NCBI_GP:TGD63783.1;Name=TGD63783.1;Note=involved in type III protein export during flagellum assembly;gbkey=CDS;gene=fliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456533.1;locus_tag=C9F07_17705;partial=true;product=flagellum-specific ATP synthase FliI;protein_id=TGD63783.1;start_range=.,1;transl_table=11 PYKI01001842.1 Genbank pseudogene 412 870 . - . ID=gene-C9F07_17710;Name=C9F07_17710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17710;pseudo=true PYKI01001842.1 Protein Homology CDS 412 870 . - 0 ID=cds-C9F07_17710;Parent=gene-C9F07_17710;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456532.1;locus_tag=C9F07_17710;product=flagellar assembly protein FliH;pseudo=true;transl_table=11 ##sequence-region PYKI01000369.1 1 953 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000369.1 Genbank region 1 953 . + . ID=PYKI01000369.1:1..953;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000369.1 Genbank gene 1 107 . - . ID=gene-C9F07_02790;Name=C9F07_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02790;partial=true;start_range=.,1 PYKI01000369.1 Protein Homology CDS 1 107 . - 0 ID=cds-TGE23185.1;Parent=gene-C9F07_02790;Dbxref=NCBI_GP:TGE23185.1;Name=TGE23185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457292.1;locus_tag=C9F07_02790;partial=true;product=virulence-associated secretory protein;protein_id=TGE23185.1;start_range=.,1;transl_table=11 PYKI01000369.1 Genbank gene 104 754 . - . ID=gene-C9F07_02795;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=C9F07_02795 PYKI01000369.1 Protein Homology CDS 104 754 . - 0 ID=cds-TGE23186.1;Parent=gene-C9F07_02795;Dbxref=NCBI_GP:TGE23186.1;Name=TGE23186.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457293.1;locus_tag=C9F07_02795;product=AraC family transcriptional regulator InvF;protein_id=TGE23186.1;transl_table=11 ##sequence-region PYKI01002485.1 1 3663 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002485.1 Genbank region 1 3663 . + . ID=PYKI01002485.1:1..3663;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002485.1 Genbank gene 237 995 . - . ID=gene-C9F07_24555;Name=C9F07_24555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24555 PYKI01002485.1 Protein Homology CDS 237 995 . - 0 ID=cds-TGD50430.1;Parent=gene-C9F07_24555;Dbxref=NCBI_GP:TGD50430.1;Name=TGD50430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457419.1;locus_tag=C9F07_24555;product=transcriptional regulator;protein_id=TGD50430.1;transl_table=11 PYKI01002485.1 Genbank gene 982 1488 . - . ID=gene-C9F07_24560;Name=C9F07_24560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24560 PYKI01002485.1 Protein Homology CDS 982 1488 . - 0 ID=cds-TGD50431.1;Parent=gene-C9F07_24560;Dbxref=NCBI_GP:TGD50431.1;Name=TGD50431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006777639.1;locus_tag=C9F07_24560;product=CaiF/GrlA family transcriptional regulator;protein_id=TGD50431.1;transl_table=11 PYKI01002485.1 Genbank gene 1597 2679 . - . ID=gene-C9F07_24565;Name=C9F07_24565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24565 PYKI01002485.1 Protein Homology CDS 1597 2679 . - 0 ID=cds-TGD50432.1;Parent=gene-C9F07_24565;Dbxref=NCBI_GP:TGD50432.1;Name=TGD50432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147761.1;locus_tag=C9F07_24565;product=adhesion protein;protein_id=TGD50432.1;transl_table=11 PYKI01002485.1 Genbank gene 2676 3419 . - . ID=gene-C9F07_24570;Name=C9F07_24570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24570 PYKI01002485.1 Protein Homology CDS 2676 3419 . - 0 ID=cds-TGD50433.1;Parent=gene-C9F07_24570;Dbxref=NCBI_GP:TGD50433.1;Name=TGD50433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=C9F07_24570;product=fimbrial chaperone protein StdC;protein_id=TGD50433.1;transl_table=11 PYKI01002485.1 Genbank pseudogene 3460 3663 . - . ID=gene-C9F07_24575;Name=C9F07_24575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24575;pseudo=true PYKI01002485.1 Protein Homology CDS 3460 3663 . - 0 ID=cds-C9F07_24575;Parent=gene-C9F07_24575;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=C9F07_24575;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002407.1 1 953 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002407.1 Genbank region 1 953 . + . ID=PYKI01002407.1:1..953;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002407.1 Genbank gene 1 319 . + . ID=gene-C9F07_23780;Name=C9F07_23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23780;partial=true;start_range=.,1 PYKI01002407.1 Protein Homology CDS 1 319 . + 1 ID=cds-TGD51792.1;Parent=gene-C9F07_23780;Dbxref=NCBI_GP:TGD51792.1;Name=TGD51792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457029.1;locus_tag=C9F07_23780;partial=true;product=hypothetical protein;protein_id=TGD51792.1;start_range=.,1;transl_table=11 PYKI01002407.1 Genbank gene 359 718 . + . ID=gene-C9F07_23785;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=C9F07_23785 PYKI01002407.1 Protein Homology CDS 359 718 . + 0 ID=cds-TGD51793.1;Parent=gene-C9F07_23785;Dbxref=NCBI_GP:TGD51793.1;Name=TGD51793.1;gbkey=CDS;gene=arsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311384.1;locus_tag=C9F07_23785;product=arsenate reductase (glutaredoxin);protein_id=TGD51793.1;transl_table=11 PYKI01002407.1 Genbank gene 745 953 . - . ID=gene-C9F07_23790;Name=C9F07_23790;end_range=953,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23790;partial=true PYKI01002407.1 Protein Homology CDS 745 953 . - 2 ID=cds-TGD51794.1;Parent=gene-C9F07_23790;Dbxref=NCBI_GP:TGD51794.1;Name=TGD51794.1;Note=controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP;end_range=953,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457031.1;locus_tag=C9F07_23790;partial=true;product=DnaA regulatory inactivator Hda;protein_id=TGD51794.1;transl_table=11 ##sequence-region PYKI01002382.1 1 951 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002382.1 Genbank region 1 951 . + . ID=PYKI01002382.1:1..951;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002382.1 Genbank gene 1 430 . - . ID=gene-C9F07_23430;Name=C9F07_23430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23430;partial=true;start_range=.,1 PYKI01002382.1 Protein Homology CDS 1 430 . - 0 ID=cds-TGD52409.1;Parent=gene-C9F07_23430;Dbxref=NCBI_GP:TGD52409.1;Name=TGD52409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458526.1;locus_tag=C9F07_23430;partial=true;product=maltose ABC transporter permease MalF;protein_id=TGD52409.1;start_range=.,1;transl_table=11 PYKI01002382.1 Genbank pseudogene 562 939 . - . ID=gene-C9F07_23435;Name=C9F07_23435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23435;pseudo=true PYKI01002382.1 Protein Homology CDS 562 939 . - 0 ID=cds-C9F07_23435;Parent=gene-C9F07_23435;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020806223.1;locus_tag=C9F07_23435;product=maltose-binding periplasmic domain protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001520.1 1 951 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001520.1 Genbank region 1 951 . + . ID=PYKI01001520.1:1..951;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001520.1 Genbank gene 1 951 . - . ID=gene-C9F07_14475;Name=pepT;end_range=951,.;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=C9F07_14475;partial=true;start_range=.,1 PYKI01001520.1 Protein Homology CDS 1 951 . - 1 ID=cds-TGD76599.1;Parent=gene-C9F07_14475;Dbxref=NCBI_GP:TGD76599.1;Name=TGD76599.1;end_range=951,.;gbkey=CDS;gene=pepT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=C9F07_14475;partial=true;product=peptidase T;protein_id=TGD76599.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003064.1 1 948 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003064.1 Genbank region 1 948 . + . ID=PYKI01003064.1:1..948;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003064.1 Genbank gene 1 207 . + . ID=gene-C9F07_30720;Name=C9F07_30720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30720;partial=true;start_range=.,1 PYKI01003064.1 Protein Homology CDS 1 207 . + 0 ID=cds-TGD40953.1;Parent=gene-C9F07_30720;Dbxref=NCBI_GP:TGD40953.1;Name=TGD40953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457812.1;locus_tag=C9F07_30720;partial=true;product=hypothetical protein;protein_id=TGD40953.1;start_range=.,1;transl_table=11 PYKI01003064.1 Genbank gene 285 605 . - . ID=gene-C9F07_30725;Name=C9F07_30725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30725 PYKI01003064.1 Protein Homology CDS 285 605 . - 0 ID=cds-TGD40954.1;Parent=gene-C9F07_30725;Dbxref=NCBI_GP:TGD40954.1;Name=TGD40954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=C9F07_30725;product=iron donor protein CyaY;protein_id=TGD40954.1;transl_table=11 PYKI01003064.1 Genbank pseudogene 675 948 . - . ID=gene-C9F07_30730;Name=C9F07_30730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30730;pseudo=true PYKI01003064.1 Protein Homology CDS 675 948 . - 1 ID=cds-C9F07_30730;Parent=gene-C9F07_30730;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457807.1;locus_tag=C9F07_30730;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001573.1 1 947 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001573.1 Genbank region 1 947 . + . ID=PYKI01001573.1:1..947;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001573.1 Genbank gene 1 947 . - . ID=gene-C9F07_15065;Name=C9F07_15065;end_range=947,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15065;partial=true;start_range=.,1 PYKI01001573.1 Protein Homology CDS 1 947 . - 0 ID=cds-TGD73230.1;Parent=gene-C9F07_15065;Dbxref=NCBI_GP:TGD73230.1;Name=TGD73230.1;end_range=947,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456333.1;locus_tag=C9F07_15065;partial=true;product=L-serine ammonia-lyase;protein_id=TGD73230.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001955.1 1 947 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001955.1 Genbank region 1 947 . + . ID=PYKI01001955.1:1..947;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001955.1 Genbank pseudogene 23 274 . - . ID=gene-C9F07_18875;Name=C9F07_18875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18875;pseudo=true PYKI01001955.1 Protein Homology CDS 23 274 . - 0 ID=cds-C9F07_18875;Parent=gene-C9F07_18875;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=C9F07_18875;product=endopeptidase;pseudo=true;transl_table=11 PYKI01001955.1 Genbank gene 351 947 . - . ID=gene-C9F07_18880;Name=C9F07_18880;end_range=947,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18880;partial=true PYKI01001955.1 Protein Homology CDS 351 947 . - 0 ID=cds-TGD60454.1;Parent=gene-C9F07_18880;Dbxref=NCBI_GP:TGD60454.1;Name=TGD60454.1;end_range=947,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456169.1;locus_tag=C9F07_18880;partial=true;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=TGD60454.1;transl_table=11 ##sequence-region PYKI01003253.1 1 947 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003253.1 Genbank region 1 947 . + . ID=PYKI01003253.1:1..947;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003253.1 Genbank gene 1 588 . + . ID=gene-C9F07_32730;Name=C9F07_32730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32730;partial=true;start_range=.,1 PYKI01003253.1 Protein Homology CDS 1 588 . + 0 ID=cds-TGD36319.1;Parent=gene-C9F07_32730;Dbxref=NCBI_GP:TGD36319.1;Name=TGD36319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455464.1;locus_tag=C9F07_32730;partial=true;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=TGD36319.1;start_range=.,1;transl_table=11 PYKI01003253.1 Genbank gene 659 947 . + . ID=gene-C9F07_32735;Name=C9F07_32735;end_range=947,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32735;partial=true PYKI01003253.1 Protein Homology CDS 659 947 . + 0 ID=cds-TGD36320.1;Parent=gene-C9F07_32735;Dbxref=NCBI_GP:TGD36320.1;Name=TGD36320.1;end_range=947,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=C9F07_32735;partial=true;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=TGD36320.1;transl_table=11 ##sequence-region PYKI01003249.1 1 947 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003249.1 Genbank region 1 947 . + . ID=PYKI01003249.1:1..947;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003249.1 Genbank pseudogene 1 947 . + . ID=gene-C9F07_32700;Name=C9F07_32700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32700;pseudo=true PYKI01003249.1 Protein Homology CDS 1 947 . + 2 ID=cds-C9F07_32700;Parent=gene-C9F07_32700;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456166.1;locus_tag=C9F07_32700;product=YdiU family protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001531.1 1 946 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001531.1 Genbank region 1 946 . + . ID=PYKI01001531.1:1..946;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001531.1 Genbank gene 1 209 . + . ID=gene-C9F07_14610;Name=C9F07_14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14610;partial=true;start_range=.,1 PYKI01001531.1 Protein Homology CDS 1 209 . + 2 ID=cds-TGD76353.1;Parent=gene-C9F07_14610;Dbxref=NCBI_GP:TGD76353.1;Name=TGD76353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441950.1;locus_tag=C9F07_14610;partial=true;product=Holliday junction branch migration DNA helicase RuvB;protein_id=TGD76353.1;start_range=.,1;transl_table=11 PYKI01001531.1 Genbank gene 288 946 . - . ID=gene-C9F07_14615;Name=C9F07_14615;end_range=946,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14615;partial=true PYKI01001531.1 Protein Homology CDS 288 946 . - 2 ID=cds-TGD76354.1;Parent=gene-C9F07_14615;Dbxref=NCBI_GP:TGD76354.1;Name=TGD76354.1;end_range=946,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=C9F07_14615;partial=true;product=zinc ABC transporter permease;protein_id=TGD76354.1;transl_table=11 ##sequence-region PYKI01001635.1 1 945 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001635.1 Genbank region 1 945 . + . ID=PYKI01001635.1:1..945;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001635.1 Genbank gene 1 489 . + . ID=gene-C9F07_15620;Name=C9F07_15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15620;partial=true;start_range=.,1 PYKI01001635.1 Protein Homology CDS 1 489 . + 0 ID=cds-TGD70444.1;Parent=gene-C9F07_15620;Dbxref=NCBI_GP:TGD70444.1;Name=TGD70444.1;Note=catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455266.1;locus_tag=C9F07_15620;partial=true;product=potassium-transporting ATPase subunit KdpA;protein_id=TGD70444.1;start_range=.,1;transl_table=11 PYKI01001635.1 Genbank gene 510 945 . + . ID=gene-C9F07_15625;Name=C9F07_15625;end_range=945,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15625;partial=true PYKI01001635.1 Protein Homology CDS 510 945 . + 0 ID=cds-TGD70445.1;Parent=gene-C9F07_15625;Dbxref=NCBI_GP:TGD70445.1;Name=TGD70445.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;end_range=945,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455265.1;locus_tag=C9F07_15625;partial=true;product=potassium-transporting ATPase subunit B;protein_id=TGD70445.1;transl_table=11 ##sequence-region PYKI01000894.1 1 3660 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000894.1 Genbank region 1 3660 . + . ID=PYKI01000894.1:1..3660;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000894.1 Genbank gene 1 643 . - . ID=gene-C9F07_08175;Name=C9F07_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08175;partial=true;start_range=.,1 PYKI01000894.1 Protein Homology CDS 1 643 . - 0 ID=cds-TGE03454.1;Parent=gene-C9F07_08175;Dbxref=NCBI_GP:TGE03454.1;Name=TGE03454.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456880.1;locus_tag=C9F07_08175;partial=true;product=phosphate acetyltransferase;protein_id=TGE03454.1;start_range=.,1;transl_table=11 PYKI01000894.1 Genbank gene 720 1922 . - . ID=gene-C9F07_08180;Name=C9F07_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08180 PYKI01000894.1 Protein Homology CDS 720 1922 . - 0 ID=cds-TGE03455.1;Parent=gene-C9F07_08180;Dbxref=NCBI_GP:TGE03455.1;Name=TGE03455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=C9F07_08180;product=acetate kinase;protein_id=TGE03455.1;transl_table=11 PYKI01000894.1 Genbank gene 2262 2717 . + . ID=gene-C9F07_08185;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=C9F07_08185 PYKI01000894.1 Protein Homology CDS 2262 2717 . + 0 ID=cds-TGE03456.1;Parent=gene-C9F07_08185;Dbxref=NCBI_GP:TGE03456.1;Name=TGE03456.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=C9F07_08185;product=DUF412 domain-containing protein;protein_id=TGE03456.1;transl_table=11 PYKI01000894.1 Genbank gene 2800 3294 . + . ID=gene-C9F07_08190;Name=C9F07_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08190 PYKI01000894.1 Protein Homology CDS 2800 3294 . + 0 ID=cds-TGE03457.1;Parent=gene-C9F07_08190;Dbxref=NCBI_GP:TGE03457.1;Name=TGE03457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456877.1;locus_tag=C9F07_08190;product=YfbU family protein;protein_id=TGE03457.1;transl_table=11 PYKI01000894.1 Genbank gene 3287 3660 . + . ID=gene-C9F07_08195;Name=C9F07_08195;end_range=3660,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08195;partial=true PYKI01000894.1 Protein Homology CDS 3287 3660 . + 0 ID=cds-TGE03458.1;Parent=gene-C9F07_08195;Dbxref=NCBI_GP:TGE03458.1;Name=TGE03458.1;end_range=3660,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456876.3;locus_tag=C9F07_08195;partial=true;product=phosphatase;protein_id=TGE03458.1;transl_table=11 ##sequence-region PYKI01000086.1 1 944 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000086.1 Genbank region 1 944 . + . ID=PYKI01000086.1:1..944;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000086.1 Genbank gene 1 363 . + . ID=gene-C9F07_00540;Name=C9F07_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00540;partial=true;start_range=.,1 PYKI01000086.1 Protein Homology CDS 1 363 . + 0 ID=cds-TGE30150.1;Parent=gene-C9F07_00540;Dbxref=NCBI_GP:TGE30150.1;Name=TGE30150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=C9F07_00540;partial=true;product=ATP-independent periplasmic protein-refolding chaperone;protein_id=TGE30150.1;start_range=.,1;transl_table=11 PYKI01000086.1 Genbank gene 438 944 . - . ID=gene-C9F07_00545;Name=C9F07_00545;end_range=944,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00545;partial=true PYKI01000086.1 Protein Homology CDS 438 944 . - 0 ID=cds-TGE30151.1;Parent=gene-C9F07_00545;Dbxref=NCBI_GP:TGE30151.1;Name=TGE30151.1;Note=3' incision activity%3B acts with UvrC;end_range=944,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456203.1;locus_tag=C9F07_00545;partial=true;product=endonuclease;protein_id=TGE30151.1;transl_table=11 ##sequence-region PYKI01003485.1 1 943 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003485.1 Genbank region 1 943 . + . ID=PYKI01003485.1:1..943;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003485.1 Genbank gene 1 353 . - . ID=gene-C9F07_35075;Name=C9F07_35075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35075;partial=true;start_range=.,1 PYKI01003485.1 Protein Homology CDS 1 353 . - 0 ID=cds-TGD32485.1;Parent=gene-C9F07_35075;Dbxref=NCBI_GP:TGD32485.1;Name=TGD32485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=C9F07_35075;partial=true;product=ASCH domain-containing protein;protein_id=TGD32485.1;start_range=.,1;transl_table=11 PYKI01003485.1 Genbank gene 364 943 . - . ID=gene-C9F07_35080;Name=C9F07_35080;end_range=943,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35080;partial=true PYKI01003485.1 Protein Homology CDS 364 943 . - 1 ID=cds-TGD32484.1;Parent=gene-C9F07_35080;Dbxref=NCBI_GP:TGD32484.1;Name=TGD32484.1;end_range=943,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458506.1;locus_tag=C9F07_35080;partial=true;product=acetate operon transcriptional repressor IclR;protein_id=TGD32484.1;transl_table=11 ##sequence-region PYKI01000795.1 1 943 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000795.1 Genbank region 1 943 . + . ID=PYKI01000795.1:1..943;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000795.1 Genbank pseudogene 31 111 . - . ID=gene-C9F07_07140;Name=C9F07_07140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07140;pseudo=true PYKI01000795.1 Protein Homology CDS 31 111 . - 0 ID=cds-C9F07_07140;Parent=gene-C9F07_07140;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310467.1;locus_tag=C9F07_07140;product=6-phospho-beta-glucosidase;pseudo=true;transl_table=11 PYKI01000795.1 Genbank gene 236 943 . - . ID=gene-C9F07_07145;Name=C9F07_07145;end_range=943,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07145;partial=true PYKI01000795.1 Protein Homology CDS 236 943 . - 0 ID=cds-TGE09151.1;Parent=gene-C9F07_07145;Dbxref=NCBI_GP:TGE09151.1;Name=TGE09151.1;end_range=943,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456197.1;locus_tag=C9F07_07145;partial=true;product=transcriptional regulator ChbR;protein_id=TGE09151.1;transl_table=11 ##sequence-region PYKI01002478.1 1 943 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002478.1 Genbank region 1 943 . + . ID=PYKI01002478.1:1..943;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002478.1 Genbank gene 1 834 . - . ID=gene-C9F07_24470;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=C9F07_24470;partial=true;start_range=.,1 PYKI01002478.1 Protein Homology CDS 1 834 . - 0 ID=cds-TGD50529.1;Parent=gene-C9F07_24470;Dbxref=NCBI_GP:TGD50529.1;Name=TGD50529.1;gbkey=CDS;gene=ftsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457959.1;locus_tag=C9F07_24470;partial=true;product=cell division protein FtsN;protein_id=TGD50529.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001638.1 1 942 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001638.1 Genbank region 1 942 . + . ID=PYKI01001638.1:1..942;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001638.1 Genbank gene 1 562 . - . ID=gene-C9F07_15650;Name=C9F07_15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15650;partial=true;start_range=.,1 PYKI01001638.1 Protein Homology CDS 1 562 . - 0 ID=cds-TGD70404.1;Parent=gene-C9F07_15650;Dbxref=NCBI_GP:TGD70404.1;Name=TGD70404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=C9F07_15650;partial=true;product=methyl-accepting chemotaxis protein;protein_id=TGD70404.1;start_range=.,1;transl_table=11 PYKI01001638.1 Genbank gene 561 776 . + . ID=gene-C9F07_15655;Name=C9F07_15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15655 PYKI01001638.1 Protein Homology CDS 561 776 . + 0 ID=cds-TGD70405.1;Parent=gene-C9F07_15655;Dbxref=NCBI_GP:TGD70405.1;Name=TGD70405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012513013.1;locus_tag=C9F07_15655;product=hypothetical protein;protein_id=TGD70405.1;transl_table=11 PYKI01001638.1 Genbank gene 731 942 . - . ID=gene-C9F07_15660;Name=C9F07_15660;end_range=942,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15660;partial=true PYKI01001638.1 Protein Homology CDS 731 942 . - 2 ID=cds-TGD70406.1;Parent=gene-C9F07_15660;Dbxref=NCBI_GP:TGD70406.1;Name=TGD70406.1;end_range=942,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=C9F07_15660;partial=true;product=alcohol dehydrogenase;protein_id=TGD70406.1;transl_table=11 ##sequence-region PYKI01002366.1 1 942 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002366.1 Genbank region 1 942 . + . ID=PYKI01002366.1:1..942;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002366.1 Genbank pseudogene 84 299 . - . ID=gene-C9F07_23270;Name=C9F07_23270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23270;pseudo=true PYKI01002366.1 Protein Homology CDS 84 299 . - 0 ID=cds-C9F07_23270;Parent=gene-C9F07_23270;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=C9F07_23270;product=YgdI/YgdR family lipoprotein;pseudo=true;transl_table=11 PYKI01002366.1 Genbank gene 469 942 . - . ID=gene-C9F07_23275;Name=C9F07_23275;end_range=942,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23275;partial=true PYKI01002366.1 Protein Homology CDS 469 942 . - 0 ID=cds-TGD52839.1;Parent=gene-C9F07_23275;Dbxref=NCBI_GP:TGD52839.1;Name=TGD52839.1;end_range=942,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457400.1;locus_tag=C9F07_23275;partial=true;product=hypothetical protein;protein_id=TGD52839.1;transl_table=11 ##sequence-region PYKI01003326.1 1 942 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003326.1 Genbank region 1 942 . + . ID=PYKI01003326.1:1..942;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003326.1 Genbank gene 1 333 . - . ID=gene-C9F07_33460;Name=C9F07_33460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33460;partial=true;start_range=.,1 PYKI01003326.1 Protein Homology CDS 1 333 . - 0 ID=cds-TGD35923.1;Parent=gene-C9F07_33460;Dbxref=NCBI_GP:TGD35923.1;Name=TGD35923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001522746.1;locus_tag=C9F07_33460;partial=true;product=NADH oxidoreductase;protein_id=TGD35923.1;start_range=.,1;transl_table=11 PYKI01003326.1 Genbank gene 345 942 . - . ID=gene-C9F07_33465;Name=C9F07_33465;end_range=942,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33465;partial=true PYKI01003326.1 Protein Homology CDS 345 942 . - 1 ID=cds-TGD35924.1;Parent=gene-C9F07_33465;Dbxref=NCBI_GP:TGD35924.1;Name=TGD35924.1;end_range=942,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=C9F07_33465;partial=true;product=hydroxylamine reductase;protein_id=TGD35924.1;transl_table=11 ##sequence-region PYKI01000520.1 1 938 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000520.1 Genbank region 1 938 . + . ID=PYKI01000520.1:1..938;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000520.1 Genbank gene 1 888 . + . ID=gene-C9F07_04315;Name=C9F07_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04315;partial=true;start_range=.,1 PYKI01000520.1 Protein Homology CDS 1 888 . + 0 ID=cds-TGE16372.1;Parent=gene-C9F07_04315;Dbxref=NCBI_GP:TGE16372.1;Name=TGE16372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528005.1;locus_tag=C9F07_04315;partial=true;product=DUF4459 domain-containing protein;protein_id=TGE16372.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000299.1 1 938 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000299.1 Genbank region 1 938 . + . ID=PYKI01000299.1:1..938;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000299.1 Genbank gene 1 907 . - . ID=gene-C9F07_01975;Name=C9F07_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01975;partial=true;start_range=.,1 PYKI01000299.1 Protein Homology CDS 1 907 . - 0 ID=cds-TGE27802.1;Parent=gene-C9F07_01975;Dbxref=NCBI_GP:TGE27802.1;Name=TGE27802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664702.1;locus_tag=C9F07_01975;partial=true;product=hypothetical protein;protein_id=TGE27802.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003581.1 1 938 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003581.1 Genbank region 1 938 . + . ID=PYKI01003581.1:1..938;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003581.1 Genbank pseudogene 1 799 . + . ID=gene-C9F07_36135;Name=C9F07_36135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_36135;pseudo=true PYKI01003581.1 Protein Homology CDS 1 799 . + 0 ID=cds-C9F07_36135;Parent=gene-C9F07_36135;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006550168.1;locus_tag=C9F07_36135;product=dimethyl sulfoxide reductase subunit A;pseudo=true;transl_table=11 PYKI01003581.1 Genbank gene 780 938 . + . ID=gene-C9F07_36140;Name=C9F07_36140;end_range=938,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36140;partial=true PYKI01003581.1 Protein Homology CDS 780 938 . + 0 ID=cds-TGD30071.1;Parent=gene-C9F07_36140;Dbxref=NCBI_GP:TGD30071.1;Name=TGD30071.1;end_range=938,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455981.1;locus_tag=C9F07_36140;partial=true;product=dimethyl sulfoxide reductase chain ynfE domain protein;protein_id=TGD30071.1;transl_table=11 ##sequence-region PYKI01001782.1 1 3660 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001782.1 Genbank region 1 3660 . + . ID=PYKI01001782.1:1..3660;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001782.1 Genbank gene 1 158 . - . ID=gene-C9F07_17110;Name=C9F07_17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17110;partial=true;start_range=.,1 PYKI01001782.1 Protein Homology CDS 1 158 . - 0 ID=cds-TGD66821.1;Parent=gene-C9F07_17110;Dbxref=NCBI_GP:TGD66821.1;Name=TGD66821.1;Note=catalyzes the formation of putrescine from agmatine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499737.1;locus_tag=C9F07_17110;partial=true;product=agmatinase;protein_id=TGD66821.1;start_range=.,1;transl_table=11 PYKI01001782.1 Genbank gene 386 2362 . - . ID=gene-C9F07_17115;Name=C9F07_17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17115 PYKI01001782.1 Protein Homology CDS 386 2362 . - 0 ID=cds-TGD66822.1;Parent=gene-C9F07_17115;Dbxref=NCBI_GP:TGD66822.1;Name=TGD66822.1;Note=catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457479.1;locus_tag=C9F07_17115;product=arginine decarboxylase;protein_id=TGD66822.1;transl_table=11 PYKI01001782.1 Genbank gene 2371 2502 . - . ID=gene-C9F07_17120;Name=C9F07_17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17120 PYKI01001782.1 Protein Homology CDS 2371 2502 . - 0 ID=cds-TGD66823.1;Parent=gene-C9F07_17120;Dbxref=NCBI_GP:TGD66823.1;Name=TGD66823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457480.1;locus_tag=C9F07_17120;product=virulence promoting factor;protein_id=TGD66823.1;transl_table=11 PYKI01001782.1 Genbank pseudogene 2636 2841 . + . ID=gene-C9F07_17125;Name=C9F07_17125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17125;pseudo=true PYKI01001782.1 Protein Homology CDS 2636 2841 . + 0 ID=cds-C9F07_17125;Parent=gene-C9F07_17125;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311843.1;locus_tag=C9F07_17125;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001782.1 Genbank gene 2797 3096 . - . ID=gene-C9F07_17130;Name=C9F07_17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17130 PYKI01001782.1 Protein Homology CDS 2797 3096 . - 0 ID=cds-TGD66825.1;Parent=gene-C9F07_17130;Dbxref=NCBI_GP:TGD66825.1;Name=TGD66825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462005.1;locus_tag=C9F07_17130;product=DUF2684 domain-containing protein;protein_id=TGD66825.1;transl_table=11 PYKI01001782.1 Genbank gene 3152 3660 . + . ID=gene-C9F07_17135;Name=C9F07_17135;end_range=3660,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17135;partial=true PYKI01001782.1 Protein Homology CDS 3152 3660 . + 0 ID=cds-TGD66824.1;Parent=gene-C9F07_17135;Dbxref=NCBI_GP:TGD66824.1;Name=TGD66824.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;end_range=3660,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=C9F07_17135;partial=true;product=methionine adenosyltransferase;protein_id=TGD66824.1;transl_table=11 ##sequence-region PYKI01003115.1 1 937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003115.1 Genbank region 1 937 . + . ID=PYKI01003115.1:1..937;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003115.1 Genbank gene 45 937 . - . ID=gene-C9F07_31155;Name=C9F07_31155;end_range=937,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31155;partial=true PYKI01003115.1 Protein Homology CDS 45 937 . - 2 ID=cds-TGD39559.1;Parent=gene-C9F07_31155;Dbxref=NCBI_GP:TGD39559.1;Name=TGD39559.1;end_range=937,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454975.1;locus_tag=C9F07_31155;partial=true;product=D-alanine--D-alanine ligase;protein_id=TGD39559.1;transl_table=11 ##sequence-region PYKI01001561.1 1 937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001561.1 Genbank region 1 937 . + . ID=PYKI01001561.1:1..937;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001561.1 Genbank gene 1 937 . - . ID=gene-C9F07_14955;Name=C9F07_14955;end_range=937,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14955;partial=true;start_range=.,1 PYKI01001561.1 Protein Homology CDS 1 937 . - 0 ID=cds-TGD73816.1;Parent=gene-C9F07_14955;Dbxref=NCBI_GP:TGD73816.1;Name=TGD73816.1;end_range=937,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457768.1;locus_tag=C9F07_14955;partial=true;product=Xaa-Pro dipeptidase;protein_id=TGD73816.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002534.1 1 937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002534.1 Genbank region 1 937 . + . ID=PYKI01002534.1:1..937;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002534.1 Genbank gene 67 468 . + . ID=gene-C9F07_25135;Name=C9F07_25135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25135 PYKI01002534.1 Protein Homology CDS 67 468 . + 0 ID=cds-TGD50023.1;Parent=gene-C9F07_25135;Dbxref=NCBI_GP:TGD50023.1;Name=TGD50023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458407.1;locus_tag=C9F07_25135;product=ribosome-associated heat shock protein Hsp15;protein_id=TGD50023.1;transl_table=11 PYKI01002534.1 Genbank gene 493 937 . + . ID=gene-C9F07_25140;Name=C9F07_25140;end_range=937,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25140;partial=true PYKI01002534.1 Protein Homology CDS 493 937 . + 0 ID=cds-TGD50024.1;Parent=gene-C9F07_25140;Dbxref=NCBI_GP:TGD50024.1;Name=TGD50024.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;end_range=937,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458406.1;locus_tag=C9F07_25140;partial=true;product=redox-regulated molecular chaperone Hsp33;protein_id=TGD50024.1;transl_table=11 ##sequence-region PYKI01003523.1 1 937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003523.1 Genbank region 1 937 . + . ID=PYKI01003523.1:1..937;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003523.1 Genbank gene 252 458 . - . ID=gene-C9F07_35545;Name=C9F07_35545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35545 PYKI01003523.1 Protein Homology CDS 252 458 . - 0 ID=cds-TGD31527.1;Parent=gene-C9F07_35545;Dbxref=NCBI_GP:TGD31527.1;Name=TGD31527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458842.2;locus_tag=C9F07_35545;product=DUF1107 domain-containing protein;protein_id=TGD31527.1;transl_table=11 PYKI01003523.1 Genbank gene 592 771 . + . ID=gene-C9F07_35550;Name=C9F07_35550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35550 PYKI01003523.1 Protein Homology CDS 592 771 . + 0 ID=cds-TGD31528.1;Parent=gene-C9F07_35550;Dbxref=NCBI_GP:TGD31528.1;Name=TGD31528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219547.1;locus_tag=C9F07_35550;product=hypothetical protein;protein_id=TGD31528.1;transl_table=11 ##sequence-region PYKI01001331.1 1 937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001331.1 Genbank region 1 937 . + . ID=PYKI01001331.1:1..937;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001331.1 Genbank pseudogene 1 937 . - . ID=gene-C9F07_12445;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=pseudogene;gene_synonym=trmC,yfcK;locus_tag=C9F07_12445;pseudo=true PYKI01001331.1 Protein Homology CDS 1 937 . - 0 ID=cds-C9F07_12445;Parent=gene-C9F07_12445;Note=5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;gene=mnmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461321.3;locus_tag=C9F07_12445;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;pseudo=true;transl_table=11 ##sequence-region PYKI01000582.1 1 936 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000582.1 Genbank region 1 936 . + . ID=PYKI01000582.1:1..936;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000582.1 Genbank pseudogene 23 286 . + . ID=gene-C9F07_04925;Name=C9F07_04925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04925;pseudo=true PYKI01000582.1 Protein Homology CDS 23 286 . + 0 ID=cds-C9F07_04925;Parent=gene-C9F07_04925;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457032.1;locus_tag=C9F07_04925;product=uracil permease;pseudo=true;transl_table=11 PYKI01000582.1 Genbank gene 357 936 . + . ID=gene-C9F07_04930;Name=C9F07_04930;end_range=936,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04930;partial=true PYKI01000582.1 Protein Homology CDS 357 936 . + 0 ID=cds-TGE14370.1;Parent=gene-C9F07_04930;Dbxref=NCBI_GP:TGE14370.1;Name=TGE14370.1;end_range=936,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457031.1;locus_tag=C9F07_04930;partial=true;product=DnaA inactivator Hda;protein_id=TGE14370.1;transl_table=11 ##sequence-region PYKI01000538.1 1 936 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000538.1 Genbank region 1 936 . + . ID=PYKI01000538.1:1..936;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000538.1 Genbank pseudogene 1 880 . - . ID=gene-C9F07_04470;Name=C9F07_04470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04470;pseudo=true PYKI01000538.1 Protein Homology CDS 1 880 . - 0 ID=cds-C9F07_04470;Parent=gene-C9F07_04470;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=C9F07_04470;product=SLC13 family permease;pseudo=true;transl_table=11 ##sequence-region PYKI01002379.1 1 936 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002379.1 Genbank region 1 936 . + . ID=PYKI01002379.1:1..936;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002379.1 Genbank gene 1 354 . + . ID=gene-C9F07_23400;Name=C9F07_23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23400;partial=true;start_range=.,1 PYKI01002379.1 Protein Homology CDS 1 354 . + 0 ID=cds-TGD52496.1;Parent=gene-C9F07_23400;Dbxref=NCBI_GP:TGD52496.1;Name=TGD52496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=C9F07_23400;partial=true;product=spermidine/putrescine ABC transporter permease;protein_id=TGD52496.1;start_range=.,1;transl_table=11 PYKI01002379.1 Genbank gene 351 936 . + . ID=gene-C9F07_23405;Name=C9F07_23405;end_range=936,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23405;partial=true PYKI01002379.1 Protein Homology CDS 351 936 . + 0 ID=cds-TGD52497.1;Parent=gene-C9F07_23405;Dbxref=NCBI_GP:TGD52497.1;Name=TGD52497.1;end_range=936,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=C9F07_23405;partial=true;product=putrescine ABC transporter permease PotI;protein_id=TGD52497.1;transl_table=11 ##sequence-region PYKI01001010.1 1 935 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001010.1 Genbank region 1 935 . + . ID=PYKI01001010.1:1..935;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001010.1 Genbank gene 1 935 . - . ID=gene-C9F07_09270;Name=C9F07_09270;end_range=935,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09270;partial=true;start_range=.,1 PYKI01001010.1 Protein Homology CDS 1 935 . - 0 ID=cds-TGD97878.1;Parent=gene-C9F07_09270;Dbxref=NCBI_GP:TGD97878.1;Name=TGD97878.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;end_range=935,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=C9F07_09270;partial=true;product=periplasmic nitrate reductase subunit alpha;protein_id=TGD97878.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000625.1 1 935 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000625.1 Genbank region 1 935 . + . ID=PYKI01000625.1:1..935;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000625.1 Genbank pseudogene 287 935 . - . ID=gene-C9F07_05400;Name=C9F07_05400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05400;pseudo=true PYKI01000625.1 Protein Homology CDS 287 935 . - 1 ID=cds-C9F07_05400;Parent=gene-C9F07_05400;Note=penicillin-insensitive transglycosylase/transpeptidase%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457062.1;locus_tag=C9F07_05400;product=penicillin-binding protein 1C;pseudo=true;transl_table=11 ##sequence-region PYKI01000655.1 1 3658 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000655.1 Genbank region 1 3658 . + . ID=PYKI01000655.1:1..3658;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000655.1 Genbank gene 1 1027 . - . ID=gene-C9F07_05695;Name=C9F07_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05695;partial=true;start_range=.,1 PYKI01000655.1 Protein Homology CDS 1 1027 . - 0 ID=cds-TGE12232.1;Parent=gene-C9F07_05695;Dbxref=NCBI_GP:TGE12232.1;Name=TGE12232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456745.1;locus_tag=C9F07_05695;partial=true;product=dihydropyrimidine dehydrogenase;protein_id=TGE12232.1;start_range=.,1;transl_table=11 PYKI01000655.1 Genbank gene 1232 1477 . - . ID=gene-C9F07_05700;Name=C9F07_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05700 PYKI01000655.1 Protein Homology CDS 1232 1477 . - 0 ID=cds-TGE12233.1;Parent=gene-C9F07_05700;Dbxref=NCBI_GP:TGE12233.1;Name=TGE12233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456744.1;locus_tag=C9F07_05700;product=DUF2542 domain-containing protein;protein_id=TGE12233.1;transl_table=11 PYKI01000655.1 Genbank gene 1474 2193 . - . ID=gene-C9F07_05705;Name=C9F07_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05705 PYKI01000655.1 Protein Homology CDS 1474 2193 . - 0 ID=cds-TGE12234.1;Parent=gene-C9F07_05705;Dbxref=NCBI_GP:TGE12234.1;Name=TGE12234.1;Note=involved in vancomycin sensitivity and other barrier functions of the cell envelope;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=C9F07_05705;product=outer membrane permeability protein SanA;protein_id=TGE12234.1;transl_table=11 PYKI01000655.1 Genbank gene 2370 3254 . - . ID=gene-C9F07_05710;Name=C9F07_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05710 PYKI01000655.1 Protein Homology CDS 2370 3254 . - 0 ID=cds-TGE12235.1;Parent=gene-C9F07_05710;Dbxref=NCBI_GP:TGE12235.1;Name=TGE12235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=C9F07_05710;product=cytidine deaminase;protein_id=TGE12235.1;transl_table=11 PYKI01000655.1 Genbank pseudogene 3408 3575 . - . ID=gene-C9F07_05715;Name=C9F07_05715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05715;pseudo=true PYKI01000655.1 Protein Homology CDS 3408 3575 . - 0 ID=cds-C9F07_05715;Parent=gene-C9F07_05715;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456741.1;locus_tag=C9F07_05715;product=CidB/LrgB family autolysis modulator;pseudo=true;transl_table=11 ##sequence-region PYKI01001839.1 1 934 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001839.1 Genbank region 1 934 . + . ID=PYKI01001839.1:1..934;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001839.1 Genbank gene 16 934 . + . ID=gene-C9F07_17685;Name=C9F07_17685;end_range=934,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17685;partial=true PYKI01001839.1 Protein Homology CDS 16 934 . + 0 ID=cds-TGD63871.1;Parent=gene-C9F07_17685;Dbxref=NCBI_GP:TGD63871.1;Name=TGD63871.1;Note=necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space;end_range=934,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460122.1;locus_tag=C9F07_17685;partial=true;product=glucan biosynthesis glucosyltransferase H;protein_id=TGD63871.1;transl_table=11 ##sequence-region PYKI01000407.1 1 934 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000407.1 Genbank region 1 934 . + . ID=PYKI01000407.1:1..934;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000407.1 Genbank gene 1 934 . + . ID=gene-C9F07_03110;Name=pheT;end_range=934,.;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=C9F07_03110;partial=true;start_range=.,1 PYKI01000407.1 Protein Homology CDS 1 934 . + 0 ID=cds-TGE21036.1;Parent=gene-C9F07_03110;Dbxref=NCBI_GP:TGE21036.1;Name=TGE21036.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;end_range=934,.;gbkey=CDS;gene=pheT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=C9F07_03110;partial=true;product=phenylalanine--tRNA ligase subunit beta;protein_id=TGE21036.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000119.1 1 933 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000119.1 Genbank region 1 933 . + . ID=PYKI01000119.1:1..933;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000119.1 Genbank gene 1 381 . + . ID=gene-C9F07_00805;Name=sseC;gbkey=Gene;gene=sseC;gene_biotype=protein_coding;locus_tag=C9F07_00805;partial=true;start_range=.,1 PYKI01000119.1 Protein Homology CDS 1 381 . + 0 ID=cds-TGE30105.1;Parent=gene-C9F07_00805;Dbxref=NCBI_GP:TGE30105.1;Name=TGE30105.1;gbkey=CDS;gene=sseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=C9F07_00805;partial=true;product=SPI-2 type III secretion system translocon protein SseC;protein_id=TGE30105.1;start_range=.,1;transl_table=11 PYKI01000119.1 Genbank gene 397 933 . + . ID=gene-C9F07_00810;Name=sseD;end_range=933,.;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=C9F07_00810;partial=true PYKI01000119.1 Protein Homology CDS 397 933 . + 0 ID=cds-TGE30106.1;Parent=gene-C9F07_00810;Dbxref=NCBI_GP:TGE30106.1;Name=TGE30106.1;end_range=933,.;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=C9F07_00810;partial=true;product=SPI-2 type III secretion system translocon protein SseD;protein_id=TGE30106.1;transl_table=11 ##sequence-region PYKI01003140.1 1 933 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003140.1 Genbank region 1 933 . + . ID=PYKI01003140.1:1..933;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003140.1 Genbank gene 81 764 . - . ID=gene-C9F07_31430;Name=C9F07_31430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31430 PYKI01003140.1 Protein Homology CDS 81 764 . - 0 ID=cds-TGD38730.1;Parent=gene-C9F07_31430;Dbxref=NCBI_GP:TGD38730.1;Name=TGD38730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=C9F07_31430;product=DUF2491 domain-containing protein;protein_id=TGD38730.1;transl_table=11 ##sequence-region PYKI01001752.1 1 933 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001752.1 Genbank region 1 933 . + . ID=PYKI01001752.1:1..933;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001752.1 Genbank gene 1 933 . + . ID=gene-C9F07_16825;Name=bcsA;end_range=933,.;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=C9F07_16825;partial=true;start_range=.,1 PYKI01001752.1 Protein Homology CDS 1 933 . + 0 ID=cds-TGD68151.1;Parent=gene-C9F07_16825;Dbxref=NCBI_GP:TGD68151.1;Name=TGD68151.1;Note=polymerizes uridine 5'-diphosphate glucose to cellulose%3B acts with BcsB%2C BcsZ and BcsC in cellulose biosynthesis;end_range=933,.;gbkey=CDS;gene=bcsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=C9F07_16825;partial=true;product=UDP-forming cellulose synthase catalytic subunit;protein_id=TGD68151.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000957.1 1 932 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000957.1 Genbank region 1 932 . + . ID=PYKI01000957.1:1..932;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000957.1 Genbank pseudogene 9 563 . + . ID=gene-C9F07_08735;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=pseudogene;gene_synonym=aarF,yigQ,yigR;locus_tag=C9F07_08735;pseudo=true PYKI01000957.1 Protein Homology CDS 9 563 . + 0 ID=cds-C9F07_08735;Parent=gene-C9F07_08735;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=ubiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457779.1;locus_tag=C9F07_08735;product=ubiquinone biosynthesis regulatory protein kinase UbiB;pseudo=true;transl_table=11 PYKI01000957.1 Genbank gene 770 932 . + . ID=gene-C9F07_08740;Name=C9F07_08740;end_range=932,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08740;partial=true PYKI01000957.1 Protein Homology CDS 770 932 . + 0 ID=cds-TGE00989.1;Parent=gene-C9F07_08740;Dbxref=NCBI_GP:TGE00989.1;Name=TGE00989.1;end_range=932,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457778.1;locus_tag=C9F07_08740;partial=true;product=twin-arginine translocase subunit TatA;protein_id=TGE00989.1;transl_table=11 ##sequence-region PYKI01002745.1 1 932 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002745.1 Genbank region 1 932 . + . ID=PYKI01002745.1:1..932;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002745.1 Genbank pseudogene 10 450 . - . ID=gene-C9F07_27415;Name=C9F07_27415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27415;pseudo=true PYKI01002745.1 Protein Homology CDS 10 450 . - 0 ID=cds-C9F07_27415;Parent=gene-C9F07_27415;Note=UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455268.1;locus_tag=C9F07_27415;product=deoxyribodipyrimidine photo-lyase;pseudo=true;transl_table=11 PYKI01002745.1 Genbank gene 561 767 . - . ID=gene-C9F07_27420;Name=C9F07_27420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27420 PYKI01002745.1 Protein Homology CDS 561 767 . - 0 ID=cds-TGD46995.1;Parent=gene-C9F07_27420;Dbxref=NCBI_GP:TGD46995.1;Name=TGD46995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455267.1;locus_tag=C9F07_27420;product=DUF2517 domain-containing protein;protein_id=TGD46995.1;transl_table=11 ##sequence-region PYKI01001698.1 1 932 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001698.1 Genbank region 1 932 . + . ID=PYKI01001698.1:1..932;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001698.1 Genbank gene 1 719 . + . ID=gene-C9F07_16190;Name=C9F07_16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16190;partial=true;start_range=.,1 PYKI01001698.1 Protein Homology CDS 1 719 . + 2 ID=cds-TGD69401.1;Parent=gene-C9F07_16190;Dbxref=NCBI_GP:TGD69401.1;Name=TGD69401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310509.1;locus_tag=C9F07_16190;partial=true;product=ketose-bisphosphate aldolase;protein_id=TGD69401.1;start_range=.,1;transl_table=11 PYKI01001698.1 Genbank gene 724 932 . + . ID=gene-C9F07_16195;Name=C9F07_16195;end_range=932,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16195;partial=true PYKI01001698.1 Protein Homology CDS 724 932 . + 0 ID=cds-TGD69402.1;Parent=gene-C9F07_16195;Dbxref=NCBI_GP:TGD69402.1;Name=TGD69402.1;end_range=932,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002412789.1;locus_tag=C9F07_16195;partial=true;product=sugar kinase;protein_id=TGD69402.1;transl_table=11 ##sequence-region PYKI01003153.1 1 932 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003153.1 Genbank region 1 932 . + . ID=PYKI01003153.1:1..932;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003153.1 Genbank pseudogene 106 633 . - . ID=gene-C9F07_31620;Name=C9F07_31620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31620;pseudo=true PYKI01003153.1 Protein Homology CDS 106 633 . - 0 ID=cds-C9F07_31620;Parent=gene-C9F07_31620;Note=with FepBCG is involved in the transport of ferric enterobactin%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455168.1;locus_tag=C9F07_31620;product=iron-enterobactin transporter;pseudo=true;transl_table=11 PYKI01003153.1 Genbank pseudogene 743 916 . + . ID=gene-C9F07_31625;Name=C9F07_31625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31625;pseudo=true PYKI01003153.1 Protein Homology CDS 743 916 . + 0 ID=cds-C9F07_31625;Parent=gene-C9F07_31625;Note=protein p43%3B inner membrane protein that exports enterobactin to the periplasmic space%3B member of the major facilitator superfamily (MFS) of transporters%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455169.1;locus_tag=C9F07_31625;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01000466.1 1 931 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000466.1 Genbank region 1 931 . + . ID=PYKI01000466.1:1..931;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000466.1 Genbank gene 1 931 . + . ID=gene-C9F07_03670;Name=secA;end_range=931,.;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=C9F07_03670;partial=true;start_range=.,1 PYKI01000466.1 Protein Homology CDS 1 931 . + 1 ID=cds-TGE19762.1;Parent=gene-C9F07_03670;Dbxref=NCBI_GP:TGE19762.1;Name=TGE19762.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;end_range=931,.;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=C9F07_03670;partial=true;product=preprotein translocase subunit SecA;protein_id=TGE19762.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002390.1 1 3654 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002390.1 Genbank region 1 3654 . + . ID=PYKI01002390.1:1..3654;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002390.1 Genbank pseudogene 44 268 . - . ID=gene-C9F07_23520;Name=C9F07_23520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23520;pseudo=true PYKI01002390.1 Protein Homology CDS 44 268 . - 0 ID=cds-C9F07_23520;Parent=gene-C9F07_23520;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=C9F07_23520;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;transl_table=11 PYKI01002390.1 Genbank gene 681 1343 . + . ID=gene-C9F07_23525;Name=C9F07_23525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23525 PYKI01002390.1 Protein Homology CDS 681 1343 . + 0 ID=cds-TGD52157.1;Parent=gene-C9F07_23525;Dbxref=NCBI_GP:TGD52157.1;Name=TGD52157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=C9F07_23525;product=acrEF/envCD operon transcriptional regulator;protein_id=TGD52157.1;transl_table=11 PYKI01002390.1 Genbank gene 1346 3445 . - . ID=gene-C9F07_23530;Name=C9F07_23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23530 PYKI01002390.1 Protein Homology CDS 1346 3445 . - 0 ID=cds-TGD52158.1;Parent=gene-C9F07_23530;Dbxref=NCBI_GP:TGD52158.1;Name=TGD52158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=C9F07_23530;product=histidine kinase;protein_id=TGD52158.1;transl_table=11 ##sequence-region PYKI01000353.1 1 931 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000353.1 Genbank region 1 931 . + . ID=PYKI01000353.1:1..931;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000353.1 Genbank gene 1 403 . - . ID=gene-C9F07_02640;Name=C9F07_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02640;partial=true;start_range=.,1 PYKI01000353.1 Protein Homology CDS 1 403 . - 0 ID=cds-TGE26813.1;Parent=gene-C9F07_02640;Dbxref=NCBI_GP:TGE26813.1;Name=TGE26813.1;Note=activates sgrS under glucose-phosphate stress conditions;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454721.1;locus_tag=C9F07_02640;partial=true;product=transcriptional regulator SgrR;protein_id=TGE26813.1;start_range=.,1;transl_table=11 PYKI01000353.1 Genbank gene 496 618 . + . ID=gene-C9F07_02645;Name=C9F07_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02645 PYKI01000353.1 Protein Homology CDS 496 618 . + 0 ID=cds-TGE26814.1;Parent=gene-C9F07_02645;Dbxref=NCBI_GP:TGE26814.1;Name=TGE26814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=C9F07_02645;product=glucose uptake inhibitor SgrT;protein_id=TGE26814.1;transl_table=11 ##sequence-region PYKI01001380.1 1 930 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001380.1 Genbank region 1 930 . + . ID=PYKI01001380.1:1..930;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001380.1 Genbank gene 1 919 . + . ID=gene-C9F07_12975;Name=C9F07_12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12975;partial=true;start_range=.,1 PYKI01001380.1 Protein Homology CDS 1 919 . + 1 ID=cds-TGD84472.1;Parent=gene-C9F07_12975;Dbxref=NCBI_GP:TGD84472.1;Name=TGD84472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457112.1;locus_tag=C9F07_12975;partial=true;product=elongation factor 4;protein_id=TGD84472.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000885.1 1 930 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000885.1 Genbank region 1 930 . + . ID=PYKI01000885.1:1..930;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000885.1 Genbank gene 1 475 . - . ID=gene-C9F07_08110;Name=C9F07_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08110;partial=true;start_range=.,1 PYKI01000885.1 Protein Homology CDS 1 475 . - 0 ID=cds-TGE03990.1;Parent=gene-C9F07_08110;Dbxref=NCBI_GP:TGE03990.1;Name=TGE03990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456982.1;locus_tag=C9F07_08110;partial=true;product=DUF1131 domain-containing protein;protein_id=TGE03990.1;start_range=.,1;transl_table=11 PYKI01000885.1 Genbank gene 537 930 . - . ID=gene-C9F07_08115;Name=C9F07_08115;end_range=930,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08115;partial=true PYKI01000885.1 Protein Homology CDS 537 930 . - 1 ID=cds-TGE03991.1;Parent=gene-C9F07_08115;Dbxref=NCBI_GP:TGE03991.1;Name=TGE03991.1;end_range=930,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456983.1;locus_tag=C9F07_08115;partial=true;product=hypothetical protein;protein_id=TGE03991.1;transl_table=11 ##sequence-region PYKI01002643.1 1 929 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002643.1 Genbank region 1 929 . + . ID=PYKI01002643.1:1..929;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002643.1 Genbank gene 1 490 . - . ID=gene-C9F07_26335;Name=C9F07_26335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26335;partial=true;start_range=.,1 PYKI01002643.1 Protein Homology CDS 1 490 . - 0 ID=cds-TGD49390.1;Parent=gene-C9F07_26335;Dbxref=NCBI_GP:TGD49390.1;Name=TGD49390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=C9F07_26335;partial=true;product=transcriptional regulator;protein_id=TGD49390.1;start_range=.,1;transl_table=11 PYKI01002643.1 Genbank gene 652 929 . + . ID=gene-C9F07_26340;Name=C9F07_26340;end_range=929,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26340;partial=true PYKI01002643.1 Protein Homology CDS 652 929 . + 0 ID=cds-TGD49391.1;Parent=gene-C9F07_26340;Dbxref=NCBI_GP:TGD49391.1;Name=TGD49391.1;end_range=929,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456823.1;locus_tag=C9F07_26340;partial=true;product=MFS transporter;protein_id=TGD49391.1;transl_table=11 ##sequence-region PYKI01002225.1 1 929 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002225.1 Genbank region 1 929 . + . ID=PYKI01002225.1:1..929;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002225.1 Genbank pseudogene 86 511 . + . ID=gene-C9F07_21695;Name=C9F07_21695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21695;pseudo=true PYKI01002225.1 Protein Homology CDS 86 511 . + 0 ID=cds-C9F07_21695;Parent=gene-C9F07_21695;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=C9F07_21695;product=fimbrial protein StiH;pseudo=true;transl_table=11 PYKI01002225.1 Genbank gene 629 929 . - . ID=gene-C9F07_21700;Name=C9F07_21700;end_range=929,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21700;partial=true PYKI01002225.1 Protein Homology CDS 629 929 . - 1 ID=cds-TGD56208.1;Parent=gene-C9F07_21700;Dbxref=NCBI_GP:TGD56208.1;Name=TGD56208.1;end_range=929,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=C9F07_21700;partial=true;product=ABC transporter permease;protein_id=TGD56208.1;transl_table=11 ##sequence-region PYKI01003103.1 1 929 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003103.1 Genbank region 1 929 . + . ID=PYKI01003103.1:1..929;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003103.1 Genbank pseudogene 1 813 . - . ID=gene-C9F07_31065;Name=C9F07_31065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31065;pseudo=true PYKI01003103.1 Protein Homology CDS 1 813 . - 0 ID=cds-C9F07_31065;Parent=gene-C9F07_31065;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=C9F07_31065;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01000166.1 1 929 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000166.1 Genbank region 1 929 . + . ID=PYKI01000166.1:1..929;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000166.1 Genbank gene 1 291 . - . ID=gene-C9F07_01125;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=C9F07_01125;partial=true;start_range=.,1 PYKI01000166.1 Protein Homology CDS 1 291 . - 0 ID=cds-TGE30061.1;Parent=gene-C9F07_01125;Dbxref=NCBI_GP:TGE30061.1;Name=TGE30061.1;gbkey=CDS;gene=atpH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=C9F07_01125;partial=true;product=ATP synthase F1 subunit delta;protein_id=TGE30061.1;start_range=.,1;transl_table=11 PYKI01000166.1 Genbank gene 306 776 . - . ID=gene-C9F07_01130;Name=C9F07_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01130 PYKI01000166.1 Protein Homology CDS 306 776 . - 0 ID=cds-TGE30062.1;Parent=gene-C9F07_01130;Dbxref=NCBI_GP:TGE30062.1;Name=TGE30062.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=C9F07_01130;product=ATP synthase subunit B;protein_id=TGE30062.1;transl_table=11 PYKI01000166.1 Genbank gene 833 929 . - . ID=gene-C9F07_01135;Name=C9F07_01135;end_range=929,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01135;partial=true PYKI01000166.1 Protein Homology CDS 833 929 . - 1 ID=cds-TGE30063.1;Parent=gene-C9F07_01135;Dbxref=NCBI_GP:TGE30063.1;Name=TGE30063.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0;end_range=929,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708948.1;locus_tag=C9F07_01135;partial=true;product=ATP F0F1 synthase subunit C;protein_id=TGE30063.1;transl_table=11 ##sequence-region PYKI01002900.1 1 928 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002900.1 Genbank region 1 928 . + . ID=PYKI01002900.1:1..928;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002900.1 Genbank pseudogene 1 306 . - . ID=gene-C9F07_29050;Name=C9F07_29050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29050;pseudo=true PYKI01002900.1 Protein Homology CDS 1 306 . - 0 ID=cds-C9F07_29050;Parent=gene-C9F07_29050;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458436.1;locus_tag=C9F07_29050;product=OsmC family protein;pseudo=true;transl_table=11 PYKI01002900.1 Genbank gene 614 928 . + . ID=gene-C9F07_29055;Name=C9F07_29055;end_range=928,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29055;partial=true PYKI01002900.1 Protein Homology CDS 614 928 . + 0 ID=cds-TGD43714.1;Parent=gene-C9F07_29055;Dbxref=NCBI_GP:TGD43714.1;Name=TGD43714.1;Note=cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons;end_range=928,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312235.1;locus_tag=C9F07_29055;partial=true;product=cAMP-activated global transcriptional regulator CRP;protein_id=TGD43714.1;transl_table=11 ##sequence-region PYKI01003368.1 1 927 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003368.1 Genbank region 1 927 . + . ID=PYKI01003368.1:1..927;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003368.1 Genbank gene 1 561 . - . ID=gene-C9F07_33935;Name=C9F07_33935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33935;partial=true;start_range=.,1 PYKI01003368.1 Protein Homology CDS 1 561 . - 0 ID=cds-TGD34701.1;Parent=gene-C9F07_33935;Dbxref=NCBI_GP:TGD34701.1;Name=TGD34701.1;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=C9F07_33935;partial=true;product=glycogen debranching enzyme;protein_id=TGD34701.1;start_range=.,1;transl_table=11 PYKI01003368.1 Genbank gene 558 927 . - . ID=gene-C9F07_33940;Name=C9F07_33940;end_range=927,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33940;partial=true PYKI01003368.1 Protein Homology CDS 558 927 . - 1 ID=cds-TGD34702.1;Parent=gene-C9F07_33940;Dbxref=NCBI_GP:TGD34702.1;Name=TGD34702.1;end_range=927,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458380.1;locus_tag=C9F07_33940;partial=true;product=1%2C4-alpha-glucan branching enzyme;protein_id=TGD34702.1;transl_table=11 ##sequence-region PYKI01001990.1 1 3652 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001990.1 Genbank region 1 3652 . + . ID=PYKI01001990.1:1..3652;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001990.1 Genbank gene 1 663 . + . ID=gene-C9F07_19190;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=C9F07_19190;partial=true;start_range=.,1 PYKI01001990.1 Protein Homology CDS 1 663 . + 0 ID=cds-TGD60204.1;Parent=gene-C9F07_19190;Dbxref=NCBI_GP:TGD60204.1;Name=TGD60204.1;gbkey=CDS;gene=dapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=C9F07_19190;partial=true;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=TGD60204.1;start_range=.,1;transl_table=11 PYKI01001990.1 Genbank pseudogene 700 2001 . - . ID=gene-C9F07_19195;Name=C9F07_19195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19195;pseudo=true PYKI01001990.1 Protein Homology CDS 700 2001 . - 0 ID=cds-C9F07_19195;Parent=gene-C9F07_19195;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=C9F07_19195;product=MFS transporter;pseudo=true;transl_table=11 PYKI01001990.1 Genbank gene 2248 2634 . + . ID=gene-C9F07_19200;Name=C9F07_19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19200 PYKI01001990.1 Protein Homology CDS 2248 2634 . + 0 ID=cds-TGD60205.1;Parent=gene-C9F07_19200;Dbxref=NCBI_GP:TGD60205.1;Name=TGD60205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454819.1;locus_tag=C9F07_19200;product=hypothetical protein;protein_id=TGD60205.1;transl_table=11 PYKI01001990.1 Genbank pseudogene 2820 3652 . + . ID=gene-C9F07_19205;Name=C9F07_19205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19205;pseudo=true PYKI01001990.1 Protein Homology CDS 2820 3652 . + 0 ID=cds-C9F07_19205;Parent=gene-C9F07_19205;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000191143.1;locus_tag=C9F07_19205;product=viral enhancin protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001652.1 1 927 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001652.1 Genbank region 1 927 . + . ID=PYKI01001652.1:1..927;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001652.1 Genbank gene 1 807 . + . ID=gene-C9F07_15770;Name=C9F07_15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15770;partial=true;start_range=.,1 PYKI01001652.1 Protein Homology CDS 1 807 . + 0 ID=cds-TGD70244.1;Parent=gene-C9F07_15770;Dbxref=NCBI_GP:TGD70244.1;Name=TGD70244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=C9F07_15770;partial=true;product=aminoacetone oxidase family FAD-binding enzyme;protein_id=TGD70244.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002141.1 1 927 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002141.1 Genbank region 1 927 . + . ID=PYKI01002141.1:1..927;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002141.1 Genbank pseudogene 1 600 . + . ID=gene-C9F07_20760;Name=tus;gbkey=Gene;gene=tus;gene_biotype=pseudogene;locus_tag=C9F07_20760;pseudo=true PYKI01002141.1 Protein Homology CDS 1 600 . + 0 ID=cds-C9F07_20760;Parent=gene-C9F07_20760;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=tus;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=C9F07_20760;product=DNA replication terminus site-binding protein;pseudo=true;transl_table=11 PYKI01002141.1 Genbank gene 597 927 . - . ID=gene-C9F07_20765;Name=C9F07_20765;end_range=927,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20765;partial=true PYKI01002141.1 Protein Homology CDS 597 927 . - 1 ID=cds-TGD57814.1;Parent=gene-C9F07_20765;Dbxref=NCBI_GP:TGD57814.1;Name=TGD57814.1;end_range=927,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456063.1;locus_tag=C9F07_20765;partial=true;product=fumarate hydratase;protein_id=TGD57814.1;transl_table=11 ##sequence-region PYKI01002676.1 1 926 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002676.1 Genbank region 1 926 . + . ID=PYKI01002676.1:1..926;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002676.1 Genbank gene 1 361 . - . ID=gene-C9F07_26665;Name=C9F07_26665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26665;partial=true;start_range=.,1 PYKI01002676.1 Protein Homology CDS 1 361 . - 0 ID=cds-TGD48792.1;Parent=gene-C9F07_26665;Dbxref=NCBI_GP:TGD48792.1;Name=TGD48792.1;Note=required for anaerobic carnitine reduction%2C may act to transfer electrons to crotonobetaine reductase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454685.1;locus_tag=C9F07_26665;partial=true;product=electron transfer flavoprotein;protein_id=TGD48792.1;start_range=.,1;transl_table=11 PYKI01002676.1 Genbank gene 429 614 . - . ID=gene-C9F07_26670;Name=C9F07_26670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26670 PYKI01002676.1 Protein Homology CDS 429 614 . - 0 ID=cds-TGD48793.1;Parent=gene-C9F07_26670;Dbxref=NCBI_GP:TGD48793.1;Name=TGD48793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001671721.1;locus_tag=C9F07_26670;product=hypothetical protein;protein_id=TGD48793.1;transl_table=11 PYKI01002676.1 Genbank gene 842 926 . + . ID=gene-C9F07_26675;Name=C9F07_26675;end_range=926,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26675;partial=true PYKI01002676.1 Protein Homology CDS 842 926 . + 0 ID=cds-TGD48794.1;Parent=gene-C9F07_26675;Dbxref=NCBI_GP:TGD48794.1;Name=TGD48794.1;end_range=926,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=C9F07_26675;partial=true;product=antiporter;protein_id=TGD48794.1;transl_table=11 ##sequence-region PYKI01001055.1 1 926 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001055.1 Genbank region 1 926 . + . ID=PYKI01001055.1:1..926;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001055.1 Genbank pseudogene 1 926 . + . ID=gene-C9F07_09745;Name=C9F07_09745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09745;pseudo=true PYKI01001055.1 Protein Homology CDS 1 926 . + 1 ID=cds-C9F07_09745;Parent=gene-C9F07_09745;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457063.1;locus_tag=C9F07_09745;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003293.1 1 926 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003293.1 Genbank region 1 926 . + . ID=PYKI01003293.1:1..926;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003293.1 Genbank gene 1 698 . + . ID=gene-C9F07_33115;Name=C9F07_33115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33115;partial=true;start_range=.,1 PYKI01003293.1 Protein Homology CDS 1 698 . + 2 ID=cds-TGD36081.1;Parent=gene-C9F07_33115;Dbxref=NCBI_GP:TGD36081.1;Name=TGD36081.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463213.3;locus_tag=C9F07_33115;partial=true;product=ribosome biogenesis GTPase RsgA;protein_id=TGD36081.1;start_range=.,1;transl_table=11 PYKI01003293.1 Genbank gene 790 926 . + . ID=gene-C9F07_33120;Name=psd;end_range=926,.;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=C9F07_33120;partial=true PYKI01003293.1 Protein Homology CDS 790 926 . + 0 ID=cds-TGD36082.1;Parent=gene-C9F07_33120;Dbxref=NCBI_GP:TGD36082.1;Name=TGD36082.1;Note=catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine;end_range=926,.;gbkey=CDS;gene=psd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313166.1;locus_tag=C9F07_33120;partial=true;product=phosphatidylserine decarboxylase;protein_id=TGD36082.1;transl_table=11 ##sequence-region PYKI01002620.1 1 926 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002620.1 Genbank region 1 926 . + . ID=PYKI01002620.1:1..926;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002620.1 Genbank gene 1 601 . - . ID=gene-C9F07_26050;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=C9F07_26050;partial=true;start_range=.,1 PYKI01002620.1 Protein Homology CDS 1 601 . - 0 ID=cds-TGD49513.1;Parent=gene-C9F07_26050;Dbxref=NCBI_GP:TGD49513.1;Name=TGD49513.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=C9F07_26050;partial=true;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=TGD49513.1;start_range=.,1;transl_table=11 PYKI01002620.1 Genbank pseudogene 638 826 . - . ID=gene-C9F07_26055;Name=C9F07_26055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26055;pseudo=true PYKI01002620.1 Protein Homology CDS 638 826 . - 0 ID=cds-C9F07_26055;Parent=gene-C9F07_26055;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455105.1;locus_tag=C9F07_26055;product=metal ABC transporter substrate-binding protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002634.1 1 925 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002634.1 Genbank region 1 925 . + . ID=PYKI01002634.1:1..925;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002634.1 Genbank gene 304 925 . - . ID=gene-C9F07_26215;Name=C9F07_26215;end_range=925,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26215;partial=true PYKI01002634.1 Protein Homology CDS 304 925 . - 1 ID=cds-TGD49435.1;Parent=gene-C9F07_26215;Dbxref=NCBI_GP:TGD49435.1;Name=TGD49435.1;Note=with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;end_range=925,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=C9F07_26215;partial=true;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=TGD49435.1;transl_table=11 ##sequence-region PYKI01003482.1 1 925 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003482.1 Genbank region 1 925 . + . ID=PYKI01003482.1:1..925;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003482.1 Genbank gene 1 112 . + . ID=gene-C9F07_35035;Name=C9F07_35035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35035;partial=true;start_range=.,1 PYKI01003482.1 Protein Homology CDS 1 112 . + 1 ID=cds-TGD32496.1;Parent=gene-C9F07_35035;Dbxref=NCBI_GP:TGD32496.1;Name=TGD32496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457955.1;locus_tag=C9F07_35035;partial=true;product=TIGR02117 family protein;protein_id=TGD32496.1;start_range=.,1;transl_table=11 PYKI01003482.1 Genbank gene 157 369 . - . ID=gene-C9F07_35040;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=C9F07_35040 PYKI01003482.1 Protein Homology CDS 157 369 . - 0 ID=cds-TGD32497.1;Parent=gene-C9F07_35040;Dbxref=NCBI_GP:TGD32497.1;Name=TGD32497.1;gbkey=CDS;gene=rpmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457956.1;locus_tag=C9F07_35040;product=50S ribosomal protein L31;protein_id=TGD32497.1;transl_table=11 PYKI01003482.1 Genbank gene 573 925 . + . ID=gene-C9F07_35045;Name=C9F07_35045;end_range=925,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35045;partial=true PYKI01003482.1 Protein Homology CDS 573 925 . + 0 ID=cds-TGD32498.1;Parent=gene-C9F07_35045;Dbxref=NCBI_GP:TGD32498.1;Name=TGD32498.1;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity;end_range=925,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457957.1;locus_tag=C9F07_35045;partial=true;product=primosomal protein N';protein_id=TGD32498.1;transl_table=11 ##sequence-region PYKI01001756.1 1 925 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001756.1 Genbank region 1 925 . + . ID=PYKI01001756.1:1..925;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001756.1 Genbank gene 1 346 . + . ID=gene-C9F07_16865;Name=C9F07_16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16865;partial=true;start_range=.,1 PYKI01001756.1 Protein Homology CDS 1 346 . + 1 ID=cds-TGD68140.1;Parent=gene-C9F07_16865;Dbxref=NCBI_GP:TGD68140.1;Name=TGD68140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=C9F07_16865;partial=true;product=propanediol utilization protein;protein_id=TGD68140.1;start_range=.,1;transl_table=11 PYKI01001756.1 Genbank gene 346 696 . + . ID=gene-C9F07_16870;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=C9F07_16870 PYKI01001756.1 Protein Homology CDS 346 696 . + 0 ID=cds-TGD68141.1;Parent=gene-C9F07_16870;Dbxref=NCBI_GP:TGD68141.1;Name=TGD68141.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456604.1;locus_tag=C9F07_16870;product=propanediol utilization microcompartment protein PduU;protein_id=TGD68141.1;transl_table=11 PYKI01001756.1 Genbank gene 701 925 . + . ID=gene-C9F07_16875;Name=pduV;end_range=925,.;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=C9F07_16875;partial=true PYKI01001756.1 Protein Homology CDS 701 925 . + 0 ID=cds-TGD68142.1;Parent=gene-C9F07_16875;Dbxref=NCBI_GP:TGD68142.1;Name=TGD68142.1;end_range=925,.;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456605.1;locus_tag=C9F07_16875;partial=true;product=propanediol utilization protein PduV;protein_id=TGD68142.1;transl_table=11 ##sequence-region PYKI01000786.1 1 924 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000786.1 Genbank region 1 924 . + . ID=PYKI01000786.1:1..924;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000786.1 Genbank gene 186 924 . - . ID=gene-C9F07_07090;Name=gudD;end_range=924,.;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=C9F07_07090;partial=true PYKI01000786.1 Protein Homology CDS 186 924 . - 1 ID=cds-TGE09161.1;Parent=gene-C9F07_07090;Dbxref=NCBI_GP:TGE09161.1;Name=TGE09161.1;Note=catalyzes the formation of 5-keto-4-deoxy-D-glucarate from glucarate;end_range=924,.;gbkey=CDS;gene=gudD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457356.1;locus_tag=C9F07_07090;partial=true;product=glucarate dehydratase;protein_id=TGE09161.1;transl_table=11 ##sequence-region PYKI01001745.1 1 7194 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001745.1 Genbank region 1 7194 . + . ID=PYKI01001745.1:1..7194;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001745.1 Genbank gene 1 304 . + . ID=gene-C9F07_16705;Name=C9F07_16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16705;partial=true;start_range=.,1 PYKI01001745.1 Protein Homology CDS 1 304 . + 1 ID=cds-TGD68318.1;Parent=gene-C9F07_16705;Dbxref=NCBI_GP:TGD68318.1;Name=TGD68318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456113.1;locus_tag=C9F07_16705;partial=true;product=EscN/YscN/HrcN family type III secretion system ATPase;protein_id=TGD68318.1;start_range=.,1;transl_table=11 PYKI01001745.1 Genbank gene 307 684 . + . ID=gene-C9F07_16710;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=C9F07_16710 PYKI01001745.1 Protein Homology CDS 307 684 . + 0 ID=cds-TGD68319.1;Parent=gene-C9F07_16710;Dbxref=NCBI_GP:TGD68319.1;Name=TGD68319.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=C9F07_16710;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=TGD68319.1;transl_table=11 PYKI01001745.1 Genbank gene 665 1039 . + . ID=gene-C9F07_16715;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=C9F07_16715 PYKI01001745.1 Protein Homology CDS 665 1039 . + 0 ID=cds-TGD68320.1;Parent=gene-C9F07_16715;Dbxref=NCBI_GP:TGD68320.1;Name=TGD68320.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456111.1;locus_tag=C9F07_16715;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=TGD68320.1;transl_table=11 PYKI01001745.1 Genbank gene 1020 1988 . + . ID=gene-C9F07_16720;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=C9F07_16720 PYKI01001745.1 Protein Homology CDS 1020 1988 . + 0 ID=cds-TGD68321.1;Parent=gene-C9F07_16720;Dbxref=NCBI_GP:TGD68321.1;Name=TGD68321.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456110.1;locus_tag=C9F07_16720;product=SPI-2 type III secretion system apparatus protein SsaQ;protein_id=TGD68321.1;transl_table=11 PYKI01001745.1 Genbank gene 2056 2703 . + . ID=gene-C9F07_16725;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=C9F07_16725 PYKI01001745.1 Protein Homology CDS 2056 2703 . + 0 ID=cds-TGD68322.1;Parent=gene-C9F07_16725;Dbxref=NCBI_GP:TGD68322.1;Name=TGD68322.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=C9F07_16725;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=TGD68322.1;transl_table=11 PYKI01001745.1 Genbank gene 2700 2966 . + . ID=gene-C9F07_16730;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=C9F07_16730 PYKI01001745.1 Protein Homology CDS 2700 2966 . + 0 ID=cds-TGD68323.1;Parent=gene-C9F07_16730;Dbxref=NCBI_GP:TGD68323.1;Name=TGD68323.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=C9F07_16730;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=TGD68323.1;transl_table=11 PYKI01001745.1 Genbank gene 2967 3746 . + . ID=gene-C9F07_16735;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=C9F07_16735 PYKI01001745.1 Protein Homology CDS 2967 3746 . + 0 ID=cds-TGD68324.1;Parent=gene-C9F07_16735;Dbxref=NCBI_GP:TGD68324.1;Name=TGD68324.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456107.1;locus_tag=C9F07_16735;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=TGD68324.1;transl_table=11 PYKI01001745.1 Genbank gene 3743 4801 . + . ID=gene-C9F07_16740;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=C9F07_16740 PYKI01001745.1 Protein Homology CDS 3743 4801 . + 0 ID=cds-TGD68325.1;Parent=gene-C9F07_16740;Dbxref=NCBI_GP:TGD68325.1;Name=TGD68325.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456106.1;locus_tag=C9F07_16740;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=TGD68325.1;transl_table=11 PYKI01001745.1 Genbank gene 4969 5045 . - . ID=gene-C9F07_16745;Name=C9F07_16745;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_16745 PYKI01001745.1 tRNAscan-SE tRNA 4969 5045 . - . ID=rna-C9F07_16745;Parent=gene-C9F07_16745;anticodon=(pos:complement(5009..5011));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_16745;product=tRNA-Val PYKI01001745.1 tRNAscan-SE exon 4969 5045 . - . ID=exon-C9F07_16745-1;Parent=rna-C9F07_16745;anticodon=(pos:complement(5009..5011));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_16745;product=tRNA-Val PYKI01001745.1 Genbank gene 5056 5132 . - . ID=gene-C9F07_16750;Name=C9F07_16750;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_16750 PYKI01001745.1 tRNAscan-SE tRNA 5056 5132 . - . ID=rna-C9F07_16750;Parent=gene-C9F07_16750;anticodon=(pos:complement(5096..5098));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_16750;product=tRNA-Val PYKI01001745.1 tRNAscan-SE exon 5056 5132 . - . ID=exon-C9F07_16750-1;Parent=rna-C9F07_16750;anticodon=(pos:complement(5096..5098));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_16750;product=tRNA-Val PYKI01001745.1 Genbank gene 5284 6657 . - . ID=gene-C9F07_16755;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=C9F07_16755 PYKI01001745.1 Protein Homology CDS 5284 6657 . - 0 ID=cds-TGD68326.1;Parent=gene-C9F07_16755;Dbxref=NCBI_GP:TGD68326.1;Name=TGD68326.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456105.1;locus_tag=C9F07_16755;product=multidrug transporter MdtK;protein_id=TGD68326.1;transl_table=11 PYKI01001745.1 Genbank gene 6874 7194 . + . ID=gene-C9F07_16760;Name=C9F07_16760;end_range=7194,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16760;partial=true PYKI01001745.1 Protein Homology CDS 6874 7194 . + 0 ID=cds-TGD68327.1;Parent=gene-C9F07_16760;Dbxref=NCBI_GP:TGD68327.1;Name=TGD68327.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;end_range=7194,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456104.1;locus_tag=C9F07_16760;partial=true;product=riboflavin synthase;protein_id=TGD68327.1;transl_table=11 ##sequence-region PYKI01002979.1 1 923 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002979.1 Genbank region 1 923 . + . ID=PYKI01002979.1:1..923;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002979.1 Genbank gene 1 268 . - . ID=gene-C9F07_29860;Name=C9F07_29860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29860;partial=true;start_range=.,1 PYKI01002979.1 Protein Homology CDS 1 268 . - 0 ID=cds-TGD41497.1;Parent=gene-C9F07_29860;Dbxref=NCBI_GP:TGD41497.1;Name=TGD41497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457968.1;locus_tag=C9F07_29860;partial=true;product=ferredoxin--NADP(+) reductase;protein_id=TGD41497.1;start_range=.,1;transl_table=11 PYKI01002979.1 Genbank gene 365 923 . - . ID=gene-C9F07_29865;Name=glpX;end_range=923,.;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=C9F07_29865;partial=true PYKI01002979.1 Protein Homology CDS 365 923 . - 1 ID=cds-TGD41498.1;Parent=gene-C9F07_29865;Dbxref=NCBI_GP:TGD41498.1;Name=TGD41498.1;end_range=923,.;gbkey=CDS;gene=glpX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457967.3;locus_tag=C9F07_29865;partial=true;product=fructose-bisphosphatase class II;protein_id=TGD41498.1;transl_table=11 ##sequence-region PYKI01000245.1 1 922 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000245.1 Genbank region 1 922 . + . ID=PYKI01000245.1:1..922;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000245.1 Genbank gene 1 922 . - . ID=gene-C9F07_01605;Name=C9F07_01605;end_range=922,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01605;partial=true;start_range=.,1 PYKI01000245.1 Protein Homology CDS 1 922 . - 2 ID=cds-TGE27863.1;Parent=gene-C9F07_01605;Dbxref=NCBI_GP:TGE27863.1;Name=TGE27863.1;Note=structural flagella protein%3B individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella%2C termed phase 1 and phase 2%2C each specified by separate structural genes;end_range=922,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461698.1;locus_tag=C9F07_01605;partial=true;product=flagellin FliC;protein_id=TGE27863.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002902.1 1 922 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002902.1 Genbank region 1 922 . + . ID=PYKI01002902.1:1..922;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002902.1 Genbank pseudogene 1 669 . - . ID=gene-C9F07_29065;Name=C9F07_29065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29065;pseudo=true PYKI01002902.1 Protein Homology CDS 1 669 . - 0 ID=cds-C9F07_29065;Parent=gene-C9F07_29065;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310863.1;locus_tag=C9F07_29065;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;pseudo=true;transl_table=11 PYKI01002902.1 Genbank gene 662 922 . - . ID=gene-C9F07_29070;Name=C9F07_29070;end_range=922,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29070;partial=true PYKI01002902.1 Protein Homology CDS 662 922 . - 0 ID=cds-TGD43711.1;Parent=gene-C9F07_29070;Dbxref=NCBI_GP:TGD43711.1;Name=TGD43711.1;Note=catalyzes the formation of GDP and D-mannose from GDP-D-mannose%3B also hydrolyzes GDP-glucose;end_range=922,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000971378.1;locus_tag=C9F07_29070;partial=true;product=GDP-mannose mannosyl hydrolase;protein_id=TGD43711.1;transl_table=11 ##sequence-region PYKI01001927.1 1 922 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001927.1 Genbank region 1 922 . + . ID=PYKI01001927.1:1..922;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001927.1 Genbank pseudogene 1 602 . + . ID=gene-C9F07_18590;Name=C9F07_18590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18590;pseudo=true PYKI01001927.1 Protein Homology CDS 1 602 . + 2 ID=cds-C9F07_18590;Parent=gene-C9F07_18590;Note=with GltJLPS and GadC for glutamate and GltJLP%2C DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272794.1;locus_tag=C9F07_18590;product=amino acid ABC transporter permease;pseudo=true;transl_table=11 PYKI01001927.1 Genbank gene 602 922 . + . ID=gene-C9F07_18595;Name=C9F07_18595;end_range=922,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18595;partial=true PYKI01001927.1 Protein Homology CDS 602 922 . + 0 ID=cds-TGD60898.1;Parent=gene-C9F07_18595;Dbxref=NCBI_GP:TGD60898.1;Name=TGD60898.1;end_range=922,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=C9F07_18595;partial=true;product=hypothetical protein;protein_id=TGD60898.1;transl_table=11 ##sequence-region PYKI01001604.1 1 922 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001604.1 Genbank region 1 922 . + . ID=PYKI01001604.1:1..922;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001604.1 Genbank gene 1 688 . - . ID=gene-C9F07_15310;Name=C9F07_15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15310;partial=true;start_range=.,1 PYKI01001604.1 Protein Homology CDS 1 688 . - 0 ID=cds-TGD71226.1;Parent=gene-C9F07_15310;Dbxref=NCBI_GP:TGD71226.1;Name=TGD71226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=C9F07_15310;partial=true;product=putrescine ABC transporter permease PotH;protein_id=TGD71226.1;start_range=.,1;transl_table=11 PYKI01001604.1 Genbank gene 698 922 . - . ID=gene-C9F07_15315;Name=C9F07_15315;end_range=922,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15315;partial=true PYKI01001604.1 Protein Homology CDS 698 922 . - 0 ID=cds-TGD71227.1;Parent=gene-C9F07_15315;Dbxref=NCBI_GP:TGD71227.1;Name=TGD71227.1;end_range=922,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455405.1;locus_tag=C9F07_15315;partial=true;product=spermidine/putrescine ABC transporter ATP-binding protein;protein_id=TGD71227.1;transl_table=11 ##sequence-region PYKI01000871.1 1 922 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000871.1 Genbank region 1 922 . + . ID=PYKI01000871.1:1..922;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000871.1 Genbank pseudogene 1 922 . - . ID=gene-C9F07_08005;Name=C9F07_08005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08005;pseudo=true PYKI01000871.1 Protein Homology CDS 1 922 . - 1 ID=cds-C9F07_08005;Parent=gene-C9F07_08005;Note=decatenates replicating daughter chromosomes%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456214.1;locus_tag=C9F07_08005;product=DNA topoisomerase III;pseudo=true;transl_table=11 ##sequence-region PYKI01001078.1 1 922 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001078.1 Genbank region 1 922 . + . ID=PYKI01001078.1:1..922;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001078.1 Genbank gene 1 693 . - . ID=gene-C9F07_09995;Name=C9F07_09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09995;partial=true;start_range=.,1 PYKI01001078.1 Protein Homology CDS 1 693 . - 0 ID=cds-TGD95743.1;Parent=gene-C9F07_09995;Dbxref=NCBI_GP:TGD95743.1;Name=TGD95743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=C9F07_09995;partial=true;product=fimbrial assembly protein;protein_id=TGD95743.1;start_range=.,1;transl_table=11 PYKI01001078.1 Genbank gene 739 922 . - . ID=gene-C9F07_10000;Name=C9F07_10000;end_range=922,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10000;partial=true PYKI01001078.1 Protein Homology CDS 739 922 . - 1 ID=cds-TGD95744.1;Parent=gene-C9F07_10000;Dbxref=NCBI_GP:TGD95744.1;Name=TGD95744.1;end_range=922,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458999.1;locus_tag=C9F07_10000;partial=true;product=fimbrial assembly protein;protein_id=TGD95744.1;transl_table=11 ##sequence-region PYKI01001763.1 1 919 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001763.1 Genbank region 1 919 . + . ID=PYKI01001763.1:1..919;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001763.1 Genbank gene 1 113 . - . ID=gene-C9F07_16920;Name=C9F07_16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16920;partial=true;start_range=.,1 PYKI01001763.1 Protein Homology CDS 1 113 . - 0 ID=cds-TGD67994.1;Parent=gene-C9F07_16920;Dbxref=NCBI_GP:TGD67994.1;Name=TGD67994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=C9F07_16920;partial=true;product=isochorismate synthase;protein_id=TGD67994.1;start_range=.,1;transl_table=11 PYKI01001763.1 Genbank gene 422 919 . + . ID=gene-C9F07_16925;Name=C9F07_16925;end_range=919,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16925;partial=true PYKI01001763.1 Protein Homology CDS 422 919 . + 0 ID=cds-TGD67993.1;Parent=gene-C9F07_16925;Dbxref=NCBI_GP:TGD67993.1;Name=TGD67993.1;end_range=919,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455170.1;locus_tag=C9F07_16925;partial=true;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=TGD67993.1;transl_table=11 ##sequence-region PYKI01002818.1 1 919 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002818.1 Genbank region 1 919 . + . ID=PYKI01002818.1:1..919;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002818.1 Genbank gene 41 919 . - . ID=gene-C9F07_28205;Name=C9F07_28205;end_range=919,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28205;partial=true PYKI01002818.1 Protein Homology CDS 41 919 . - 0 ID=cds-TGD45680.1;Parent=gene-C9F07_28205;Dbxref=NCBI_GP:TGD45680.1;Name=TGD45680.1;end_range=919,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=C9F07_28205;partial=true;product=MFS transporter;protein_id=TGD45680.1;transl_table=11 ##sequence-region PYKI01001142.1 1 918 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001142.1 Genbank region 1 918 . + . ID=PYKI01001142.1:1..918;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001142.1 Genbank gene 1 319 . - . ID=gene-C9F07_10655;Name=C9F07_10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10655;partial=true;start_range=.,1 PYKI01001142.1 Protein Homology CDS 1 319 . - 0 ID=cds-TGD94260.1;Parent=gene-C9F07_10655;Dbxref=NCBI_GP:TGD94260.1;Name=TGD94260.1;Note=catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454613.1;locus_tag=C9F07_10655;partial=true;product=homoserine kinase;protein_id=TGD94260.1;start_range=.,1;transl_table=11 PYKI01001142.1 Genbank gene 321 918 . - . ID=gene-C9F07_10660;Name=C9F07_10660;end_range=918,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10660;partial=true PYKI01001142.1 Protein Homology CDS 321 918 . - 1 ID=cds-TGD94261.1;Parent=gene-C9F07_10660;Dbxref=NCBI_GP:TGD94261.1;Name=TGD94261.1;end_range=918,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=C9F07_10660;partial=true;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=TGD94261.1;transl_table=11 ##sequence-region PYKI01002357.1 1 3649 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002357.1 Genbank region 1 3649 . + . ID=PYKI01002357.1:1..3649;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002357.1 Genbank gene 1 379 . - . ID=gene-C9F07_23160;Name=C9F07_23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23160;partial=true;start_range=.,1 PYKI01002357.1 Protein Homology CDS 1 379 . - 0 ID=cds-TGD53058.1;Parent=gene-C9F07_23160;Dbxref=NCBI_GP:TGD53058.1;Name=TGD53058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458145.1;locus_tag=C9F07_23160;partial=true;product=L-fucose:H+ symporter permease;protein_id=TGD53058.1;start_range=.,1;transl_table=11 PYKI01002357.1 Genbank gene 410 1330 . - . ID=gene-C9F07_23165;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=C9F07_23165 PYKI01002357.1 Protein Homology CDS 410 1330 . - 0 ID=cds-TGD53059.1;Parent=gene-C9F07_23165;Dbxref=NCBI_GP:TGD53059.1;Name=TGD53059.1;gbkey=CDS;gene=rbsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458144.1;locus_tag=C9F07_23165;product=ribokinase;protein_id=TGD53059.1;transl_table=11 PYKI01002357.1 Genbank gene 1654 2439 . + . ID=gene-C9F07_23170;Name=C9F07_23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23170 PYKI01002357.1 Protein Homology CDS 1654 2439 . + 0 ID=cds-TGD53060.1;Parent=gene-C9F07_23170;Dbxref=NCBI_GP:TGD53060.1;Name=TGD53060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458143.1;locus_tag=C9F07_23170;product=DeoR family transcriptional regulator;protein_id=TGD53060.1;transl_table=11 PYKI01002357.1 Genbank gene 2441 2731 . - . ID=gene-C9F07_23175;Name=C9F07_23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23175 PYKI01002357.1 Protein Homology CDS 2441 2731 . - 0 ID=cds-TGD53061.1;Parent=gene-C9F07_23175;Dbxref=NCBI_GP:TGD53061.1;Name=TGD53061.1;Note=with IlvB catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase small subunit;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458142.1;locus_tag=C9F07_23175;product=acetolactate synthase isozyme 1 small subunit;protein_id=TGD53061.1;transl_table=11 PYKI01002357.1 Genbank gene 2735 3649 . - . ID=gene-C9F07_23180;Name=C9F07_23180;end_range=3649,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23180;partial=true PYKI01002357.1 Protein Homology CDS 2735 3649 . - 0 ID=cds-TGD53062.1;Parent=gene-C9F07_23180;Dbxref=NCBI_GP:TGD53062.1;Name=TGD53062.1;end_range=3649,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=C9F07_23180;partial=true;product=acetolactate synthase catalytic subunit;protein_id=TGD53062.1;transl_table=11 ##sequence-region PYKI01000839.1 1 918 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000839.1 Genbank region 1 918 . + . ID=PYKI01000839.1:1..918;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000839.1 Genbank gene 406 588 . + . ID=gene-C9F07_07655;Name=C9F07_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07655 PYKI01000839.1 Protein Homology CDS 406 588 . + 0 ID=cds-TGE07101.1;Parent=gene-C9F07_07655;Dbxref=NCBI_GP:TGE07101.1;Name=TGE07101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530982.1;locus_tag=C9F07_07655;product=hypothetical protein;protein_id=TGE07101.1;transl_table=11 PYKI01000839.1 Genbank gene 693 918 . + . ID=gene-C9F07_07660;Name=C9F07_07660;end_range=918,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07660;partial=true PYKI01000839.1 Protein Homology CDS 693 918 . + 0 ID=cds-TGE07102.1;Parent=gene-C9F07_07660;Dbxref=NCBI_GP:TGE07102.1;Name=TGE07102.1;end_range=918,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457173.1;locus_tag=C9F07_07660;partial=true;product=glycosyl transferase;protein_id=TGE07102.1;transl_table=11 ##sequence-region PYKI01000838.1 1 918 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000838.1 Genbank region 1 918 . + . ID=PYKI01000838.1:1..918;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000838.1 Genbank gene 1 483 . + . ID=gene-C9F07_07645;Name=C9F07_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07645;partial=true;start_range=.,1 PYKI01000838.1 Protein Homology CDS 1 483 . + 0 ID=cds-TGE07103.1;Parent=gene-C9F07_07645;Dbxref=NCBI_GP:TGE07103.1;Name=TGE07103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406292.1;locus_tag=C9F07_07645;partial=true;product=nucleoside/nucleotide kinase family protein;protein_id=TGE07103.1;start_range=.,1;transl_table=11 PYKI01000838.1 Genbank gene 499 918 . - . ID=gene-C9F07_07650;Name=C9F07_07650;end_range=918,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07650;partial=true PYKI01000838.1 Protein Homology CDS 499 918 . - 0 ID=cds-TGE07104.1;Parent=gene-C9F07_07650;Dbxref=NCBI_GP:TGE07104.1;Name=TGE07104.1;end_range=918,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=C9F07_07650;partial=true;product=cobalt ABC transporter ATP-binding protein;protein_id=TGE07104.1;transl_table=11 ##sequence-region PYKI01001622.1 1 918 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001622.1 Genbank region 1 918 . + . ID=PYKI01001622.1:1..918;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001622.1 Genbank gene 1 735 . - . ID=gene-C9F07_15470;Name=C9F07_15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15470;partial=true;start_range=.,1 PYKI01001622.1 Protein Homology CDS 1 735 . - 0 ID=cds-TGD70643.1;Parent=gene-C9F07_15470;Dbxref=NCBI_GP:TGD70643.1;Name=TGD70643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894960.1;locus_tag=C9F07_15470;partial=true;product=multifunctional CCA addition/repair protein;protein_id=TGD70643.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002182.1 1 915 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002182.1 Genbank region 1 915 . + . ID=PYKI01002182.1:1..915;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002182.1 Genbank pseudogene 51 915 . - . ID=gene-C9F07_21210;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=pseudogene;locus_tag=C9F07_21210;pseudo=true PYKI01002182.1 Protein Homology CDS 51 915 . - 1 ID=cds-C9F07_21210;Parent=gene-C9F07_21210;Note=with pduED catalyzes the formation of propionaldehyde from 1%2C2-propanediol%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=C9F07_21210;product=propanediol dehydratase;pseudo=true;transl_table=11 ##sequence-region PYKI01002307.1 1 914 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002307.1 Genbank region 1 914 . + . ID=PYKI01002307.1:1..914;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002307.1 Genbank gene 1 857 . - . ID=gene-C9F07_22620;Name=C9F07_22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22620;partial=true;start_range=.,1 PYKI01002307.1 Protein Homology CDS 1 857 . - 0 ID=cds-TGD54377.1;Parent=gene-C9F07_22620;Dbxref=NCBI_GP:TGD54377.1;Name=TGD54377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001640595.1;locus_tag=C9F07_22620;partial=true;product=dimethyl sulfoxide reductase subunit A;protein_id=TGD54377.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002054.1 1 912 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002054.1 Genbank region 1 912 . + . ID=PYKI01002054.1:1..912;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002054.1 Genbank gene 125 286 . + . ID=gene-C9F07_19880;Name=C9F07_19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19880 PYKI01002054.1 Protein Homology CDS 125 286 . + 0 ID=cds-TGD59949.1;Parent=gene-C9F07_19880;Dbxref=NCBI_GP:TGD59949.1;Name=TGD59949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308615.1;locus_tag=C9F07_19880;product=YmiA family putative membrane protein;protein_id=TGD59949.1;transl_table=11 PYKI01002054.1 Genbank gene 287 457 . + . ID=gene-C9F07_19885;Name=C9F07_19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19885 PYKI01002054.1 Protein Homology CDS 287 457 . + 0 ID=cds-TGD59948.1;Parent=gene-C9F07_19885;Dbxref=NCBI_GP:TGD59948.1;Name=TGD59948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991982.1;locus_tag=C9F07_19885;product=hypothetical protein;protein_id=TGD59948.1;transl_table=11 PYKI01002054.1 Genbank pseudogene 685 870 . + . ID=gene-C9F07_19890;Name=C9F07_19890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19890;pseudo=true PYKI01002054.1 Protein Homology CDS 685 870 . + 0 ID=cds-C9F07_19890;Parent=gene-C9F07_19890;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322671.1;locus_tag=C9F07_19890;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002054.1 Genbank gene 842 912 . + . ID=gene-C9F07_19895;Name=C9F07_19895;end_range=912,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19895;partial=true PYKI01002054.1 Protein Homology CDS 842 912 . + 0 ID=cds-TGD59950.1;Parent=gene-C9F07_19895;Dbxref=NCBI_GP:TGD59950.1;Name=TGD59950.1;end_range=912,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715563.1;locus_tag=C9F07_19895;partial=true;product=aconitate hydratase;protein_id=TGD59950.1;transl_table=11 ##sequence-region PYKI01003539.1 1 912 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003539.1 Genbank region 1 912 . + . ID=PYKI01003539.1:1..912;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003539.1 Genbank gene 1 106 . + . ID=gene-C9F07_35725;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=C9F07_35725;partial=true;start_range=.,1 PYKI01003539.1 Protein Homology CDS 1 106 . + 1 ID=cds-TGD31066.1;Parent=gene-C9F07_35725;Dbxref=NCBI_GP:TGD31066.1;Name=TGD31066.1;Note=transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455812.1;locus_tag=C9F07_35725;partial=true;product=phage shock protein operon transcriptional activator;protein_id=TGD31066.1;start_range=.,1;transl_table=11 PYKI01003539.1 Genbank gene 218 912 . + . ID=gene-C9F07_35730;Name=sapA;end_range=912,.;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=C9F07_35730;partial=true PYKI01003539.1 Protein Homology CDS 218 912 . + 0 ID=cds-TGD31067.1;Parent=gene-C9F07_35730;Dbxref=NCBI_GP:TGD31067.1;Name=TGD31067.1;end_range=912,.;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=C9F07_35730;partial=true;product=peptide ABC transporter substrate-binding protein SapA;protein_id=TGD31067.1;transl_table=11 ##sequence-region PYKI01003075.1 1 911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003075.1 Genbank region 1 911 . + . ID=PYKI01003075.1:1..911;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003075.1 Genbank pseudogene 65 911 . - . ID=gene-C9F07_30825;Name=C9F07_30825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30825;pseudo=true PYKI01003075.1 Protein Homology CDS 65 911 . - 1 ID=cds-C9F07_30825;Parent=gene-C9F07_30825;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456781.1;locus_tag=C9F07_30825;product=ATP-dependent helicase;pseudo=true;transl_table=11 ##sequence-region PYKI01000722.1 1 3648 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000722.1 Genbank region 1 3648 . + . ID=PYKI01000722.1:1..3648;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000722.1 Genbank gene 14 232 . + . ID=gene-C9F07_06330;Name=C9F07_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06330 PYKI01000722.1 Protein Homology CDS 14 232 . + 0 ID=cds-TGE11113.1;Parent=gene-C9F07_06330;Dbxref=NCBI_GP:TGE11113.1;Name=TGE11113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001423646.1;locus_tag=C9F07_06330;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=TGE11113.1;transl_table=11 PYKI01000722.1 Genbank gene 433 1635 . + . ID=gene-C9F07_06335;Name=C9F07_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06335 PYKI01000722.1 Protein Homology CDS 433 1635 . + 0 ID=cds-TGE11109.1;Parent=gene-C9F07_06335;Dbxref=NCBI_GP:TGE11109.1;Name=TGE11109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454661.1;locus_tag=C9F07_06335;product=nitrite reductase;protein_id=TGE11109.1;transl_table=11 PYKI01000722.1 Genbank gene 1651 2571 . + . ID=gene-C9F07_06340;Name=C9F07_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06340 PYKI01000722.1 Protein Homology CDS 1651 2571 . + 0 ID=cds-TGE11110.1;Parent=gene-C9F07_06340;Dbxref=NCBI_GP:TGE11110.1;Name=TGE11110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=C9F07_06340;product=ribonucleoside hydrolase RihC;protein_id=TGE11110.1;transl_table=11 PYKI01000722.1 Genbank gene 2593 3279 . - . ID=gene-C9F07_06345;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=C9F07_06345 PYKI01000722.1 Protein Homology CDS 2593 3279 . - 0 ID=cds-TGE11111.1;Parent=gene-C9F07_06345;Dbxref=NCBI_GP:TGE11111.1;Name=TGE11111.1;Note=regulates the expression of citrate fermentation genes;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454663.1;locus_tag=C9F07_06345;product=response regulator;protein_id=TGE11111.1;transl_table=11 PYKI01000722.1 Genbank gene 3281 3648 . - . ID=gene-C9F07_06350;Name=C9F07_06350;end_range=3648,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06350;partial=true PYKI01000722.1 Protein Homology CDS 3281 3648 . - 2 ID=cds-TGE11112.1;Parent=gene-C9F07_06350;Dbxref=NCBI_GP:TGE11112.1;Name=TGE11112.1;end_range=3648,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=C9F07_06350;partial=true;product=sensor histidine kinase;protein_id=TGE11112.1;transl_table=11 ##sequence-region PYKI01002475.1 1 911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002475.1 Genbank region 1 911 . + . ID=PYKI01002475.1:1..911;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002475.1 Genbank gene 1 360 . - . ID=gene-C9F07_24440;Name=C9F07_24440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24440;partial=true;start_range=.,1 PYKI01002475.1 Protein Homology CDS 1 360 . - 0 ID=cds-TGD50555.1;Parent=gene-C9F07_24440;Dbxref=NCBI_GP:TGD50555.1;Name=TGD50555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455902.1;locus_tag=C9F07_24440;partial=true;product=hypothetical protein;protein_id=TGD50555.1;start_range=.,1;transl_table=11 PYKI01002475.1 Genbank gene 365 911 . - . ID=gene-C9F07_24445;Name=C9F07_24445;end_range=911,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24445;partial=true PYKI01002475.1 Protein Homology CDS 365 911 . - 1 ID=cds-TGD50556.1;Parent=gene-C9F07_24445;Dbxref=NCBI_GP:TGD50556.1;Name=TGD50556.1;end_range=911,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=C9F07_24445;partial=true;product=ssrAB-activated protein;protein_id=TGD50556.1;transl_table=11 ##sequence-region PYKI01000611.1 1 911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000611.1 Genbank region 1 911 . + . ID=PYKI01000611.1:1..911;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000611.1 Genbank pseudogene 13 165 . + . ID=gene-C9F07_05245;Name=C9F07_05245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05245;pseudo=true PYKI01000611.1 Protein Homology CDS 13 165 . + 0 ID=cds-C9F07_05245;Parent=gene-C9F07_05245;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458369.1;locus_tag=C9F07_05245;product=phosphotriesterase-related protein;pseudo=true;transl_table=11 PYKI01000611.1 Genbank pseudogene 210 911 . - . ID=gene-C9F07_05250;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=pseudogene;locus_tag=C9F07_05250;pseudo=true PYKI01000611.1 Protein Homology CDS 210 911 . - 0 ID=cds-C9F07_05250;Parent=gene-C9F07_05250;Note=periplasmic enzyme%3B post-translationally processed into two subunits which are required for wild-type enzyme activity%3B cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptides%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=ggt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=C9F07_05250;product=gamma-glutamyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01002198.1 1 911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002198.1 Genbank region 1 911 . + . ID=PYKI01002198.1:1..911;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002198.1 Genbank gene 1 157 . + . ID=gene-C9F07_21380;Name=C9F07_21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21380;partial=true;start_range=.,1 PYKI01002198.1 Protein Homology CDS 1 157 . + 1 ID=cds-TGD56550.1;Parent=gene-C9F07_21380;Dbxref=NCBI_GP:TGD56550.1;Name=TGD56550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458376.1;locus_tag=C9F07_21380;partial=true;product=transcriptional regulator;protein_id=TGD56550.1;start_range=.,1;transl_table=11 PYKI01002198.1 Genbank gene 296 829 . + . ID=gene-C9F07_21385;Name=C9F07_21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21385 PYKI01002198.1 Protein Homology CDS 296 829 . + 0 ID=cds-TGD56551.1;Parent=gene-C9F07_21385;Dbxref=NCBI_GP:TGD56551.1;Name=TGD56551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458377.1;locus_tag=C9F07_21385;product=gluconokinase;protein_id=TGD56551.1;transl_table=11 PYKI01002198.1 Genbank gene 826 911 . + . ID=gene-C9F07_21390;Name=C9F07_21390;end_range=911,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21390;partial=true PYKI01002198.1 Protein Homology CDS 826 911 . + 0 ID=cds-TGD56552.1;Parent=gene-C9F07_21390;Dbxref=NCBI_GP:TGD56552.1;Name=TGD56552.1;end_range=911,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458378.1;locus_tag=C9F07_21390;partial=true;product=gluconate transporter;protein_id=TGD56552.1;transl_table=11 ##sequence-region PYKI01001475.1 1 910 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001475.1 Genbank region 1 910 . + . ID=PYKI01001475.1:1..910;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001475.1 Genbank gene 1 910 . - . ID=gene-C9F07_14000;Name=C9F07_14000;end_range=910,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14000;partial=true;start_range=.,1 PYKI01001475.1 Protein Homology CDS 1 910 . - 2 ID=cds-TGD80083.1;Parent=gene-C9F07_14000;Dbxref=NCBI_GP:TGD80083.1;Name=TGD80083.1;end_range=910,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455204.1;locus_tag=C9F07_14000;partial=true;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=TGD80083.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000936.1 1 909 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000936.1 Genbank region 1 909 . + . ID=PYKI01000936.1:1..909;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000936.1 Genbank gene 1 124 . - . ID=gene-C9F07_08535;Name=C9F07_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08535;partial=true;start_range=.,1 PYKI01000936.1 Protein Homology CDS 1 124 . - 0 ID=cds-TGE02118.1;Parent=gene-C9F07_08535;Dbxref=NCBI_GP:TGE02118.1;Name=TGE02118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454619.1;locus_tag=C9F07_08535;partial=true;product=hypothetical protein;protein_id=TGE02118.1;start_range=.,1;transl_table=11 PYKI01000936.1 Genbank gene 274 909 . - . ID=gene-C9F07_08540;Name=C9F07_08540;end_range=909,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08540;partial=true PYKI01000936.1 Protein Homology CDS 274 909 . - 0 ID=cds-TGE02119.1;Parent=gene-C9F07_08540;Dbxref=NCBI_GP:TGE02119.1;Name=TGE02119.1;end_range=909,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454620.1;locus_tag=C9F07_08540;partial=true;product=hypothetical protein;protein_id=TGE02119.1;transl_table=11 ##sequence-region PYKI01002113.1 1 907 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002113.1 Genbank region 1 907 . + . ID=PYKI01002113.1:1..907;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002113.1 Genbank gene 1 907 . + . ID=gene-C9F07_20485;Name=C9F07_20485;end_range=907,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20485;partial=true;start_range=.,1 PYKI01002113.1 Protein Homology CDS 1 907 . + 2 ID=cds-TGD58336.1;Parent=gene-C9F07_20485;Dbxref=NCBI_GP:TGD58336.1;Name=TGD58336.1;end_range=907,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=C9F07_20485;partial=true;product=hypothetical protein;protein_id=TGD58336.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003030.1 1 907 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003030.1 Genbank region 1 907 . + . ID=PYKI01003030.1:1..907;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003030.1 Genbank gene 1 312 . - . ID=gene-C9F07_30415;Name=C9F07_30415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30415;partial=true;start_range=.,1 PYKI01003030.1 Protein Homology CDS 1 312 . - 0 ID=cds-TGD41083.1;Parent=gene-C9F07_30415;Dbxref=NCBI_GP:TGD41083.1;Name=TGD41083.1;Note=catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455300.1;locus_tag=C9F07_30415;partial=true;product=acyl-CoA thioesterase;protein_id=TGD41083.1;start_range=.,1;transl_table=11 PYKI01003030.1 Genbank gene 541 834 . - . ID=gene-C9F07_30420;Name=C9F07_30420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30420 PYKI01003030.1 Protein Homology CDS 541 834 . - 0 ID=cds-TGD41084.1;Parent=gene-C9F07_30420;Dbxref=NCBI_GP:TGD41084.1;Name=TGD41084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=C9F07_30420;product=cyd operon protein YbgE;protein_id=TGD41084.1;transl_table=11 PYKI01003030.1 Genbank gene 834 907 . - . ID=gene-C9F07_30425;Name=C9F07_30425;end_range=907,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30425;partial=true PYKI01003030.1 Protein Homology CDS 834 907 . - 2 ID=cds-TGD41085.1;Parent=gene-C9F07_30425;Dbxref=NCBI_GP:TGD41085.1;Name=TGD41085.1;end_range=907,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455298.1;locus_tag=C9F07_30425;partial=true;product=cytochrome bd-I oxidase subunit CydX;protein_id=TGD41085.1;transl_table=11 ##sequence-region PYKI01001868.1 1 906 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001868.1 Genbank region 1 906 . + . ID=PYKI01001868.1:1..906;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001868.1 Genbank gene 94 657 . - . ID=gene-C9F07_17980;Name=C9F07_17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17980 PYKI01001868.1 Protein Homology CDS 94 657 . - 0 ID=cds-TGD62782.1;Parent=gene-C9F07_17980;Dbxref=NCBI_GP:TGD62782.1;Name=TGD62782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458433.1;locus_tag=C9F07_17980;product=aminodeoxychorismate synthase component 2;protein_id=TGD62782.1;transl_table=11 PYKI01001868.1 Genbank gene 689 906 . - . ID=gene-C9F07_17985;Name=C9F07_17985;end_range=906,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17985;partial=true PYKI01001868.1 Protein Homology CDS 689 906 . - 2 ID=cds-TGD62783.1;Parent=gene-C9F07_17985;Dbxref=NCBI_GP:TGD62783.1;Name=TGD62783.1;end_range=906,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458432.1;locus_tag=C9F07_17985;partial=true;product=cell filamentation protein Fic;protein_id=TGD62783.1;transl_table=11 ##sequence-region PYKI01001090.1 1 906 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001090.1 Genbank region 1 906 . + . ID=PYKI01001090.1:1..906;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001090.1 Genbank gene 1 312 . - . ID=gene-C9F07_10155;Name=C9F07_10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10155;partial=true;start_range=.,1 PYKI01001090.1 Protein Homology CDS 1 312 . - 0 ID=cds-TGD95482.1;Parent=gene-C9F07_10155;Dbxref=NCBI_GP:TGD95482.1;Name=TGD95482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455755.1;locus_tag=C9F07_10155;partial=true;product=peptide ABC transporter ATP-binding protein;protein_id=TGD95482.1;start_range=.,1;transl_table=11 PYKI01001090.1 Genbank gene 324 906 . - . ID=gene-C9F07_10160;Name=C9F07_10160;end_range=906,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10160;partial=true PYKI01001090.1 Protein Homology CDS 324 906 . - 1 ID=cds-TGD95483.1;Parent=gene-C9F07_10160;Dbxref=NCBI_GP:TGD95483.1;Name=TGD95483.1;Note=with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell;end_range=906,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=C9F07_10160;partial=true;product=peptide ABC transporter permease;protein_id=TGD95483.1;transl_table=11 ##sequence-region PYKI01002888.1 1 906 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002888.1 Genbank region 1 906 . + . ID=PYKI01002888.1:1..906;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002888.1 Genbank gene 1 286 . - . ID=gene-C9F07_28920;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=C9F07_28920;partial=true;start_range=.,1 PYKI01002888.1 Protein Homology CDS 1 286 . - 0 ID=cds-TGD44036.1;Parent=gene-C9F07_28920;Dbxref=NCBI_GP:TGD44036.1;Name=TGD44036.1;gbkey=CDS;gene=tmk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455693.1;locus_tag=C9F07_28920;partial=true;product=dTMP kinase;protein_id=TGD44036.1;start_range=.,1;transl_table=11 PYKI01002888.1 Genbank pseudogene 276 836 . - . ID=gene-C9F07_28925;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=pseudogene;locus_tag=C9F07_28925;pseudo=true PYKI01002888.1 Protein Homology CDS 276 836 . - 0 ID=cds-C9F07_28925;Parent=gene-C9F07_28925;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=mltG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=C9F07_28925;product=endolytic transglycosylase MltG;pseudo=true;transl_table=11 ##sequence-region PYKI01002606.1 1 906 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002606.1 Genbank region 1 906 . + . ID=PYKI01002606.1:1..906;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002606.1 Genbank gene 1 513 . - . ID=gene-C9F07_25870;Name=C9F07_25870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25870;partial=true;start_range=.,1 PYKI01002606.1 Protein Homology CDS 1 513 . - 0 ID=cds-TGD49588.1;Parent=gene-C9F07_25870;Dbxref=NCBI_GP:TGD49588.1;Name=TGD49588.1;Note=catalyzes the formation of acetate from pyruvate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455425.1;locus_tag=C9F07_25870;partial=true;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=TGD49588.1;start_range=.,1;transl_table=11 PYKI01002606.1 Genbank pseudogene 671 906 . - . ID=gene-C9F07_25875;Name=C9F07_25875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25875;pseudo=true PYKI01002606.1 Protein Homology CDS 671 906 . - 2 ID=cds-C9F07_25875;Parent=gene-C9F07_25875;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455426.1;locus_tag=C9F07_25875;product=NADH oxidoreductase;pseudo=true;transl_table=11 ##sequence-region PYKI01002334.1 1 906 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002334.1 Genbank region 1 906 . + . ID=PYKI01002334.1:1..906;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002334.1 Genbank pseudogene 1 826 . + . ID=gene-C9F07_22890;Name=C9F07_22890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22890;pseudo=true PYKI01002334.1 Protein Homology CDS 1 826 . + 1 ID=cds-C9F07_22890;Parent=gene-C9F07_22890;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457158.1;locus_tag=C9F07_22890;product=large repetitive protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001442.1 1 902 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001442.1 Genbank region 1 902 . + . ID=PYKI01001442.1:1..902;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001442.1 Genbank gene 1 902 . - . ID=gene-C9F07_13650;Name=tppB;end_range=902,.;gbkey=Gene;gene=tppB;gene_biotype=protein_coding;gene_synonym=ydgR;locus_tag=C9F07_13650;partial=true;start_range=.,1 PYKI01001442.1 Protein Homology CDS 1 902 . - 1 ID=cds-TGD83688.1;Parent=gene-C9F07_13650;Dbxref=NCBI_GP:TGD83688.1;Name=TGD83688.1;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation;end_range=902,.;gbkey=CDS;gene=tppB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458325.1;locus_tag=C9F07_13650;partial=true;product=dipeptide/tripeptide permease;protein_id=TGD83688.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001706.1 1 901 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001706.1 Genbank region 1 901 . + . ID=PYKI01001706.1:1..901;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001706.1 Genbank gene 1 486 . + . ID=gene-C9F07_16270;Name=C9F07_16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16270;partial=true;start_range=.,1 PYKI01001706.1 Protein Homology CDS 1 486 . + 0 ID=cds-TGD69380.1;Parent=gene-C9F07_16270;Dbxref=NCBI_GP:TGD69380.1;Name=TGD69380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456770.1;locus_tag=C9F07_16270;partial=true;product=hypothetical protein;protein_id=TGD69380.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000921.1 1 901 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000921.1 Genbank region 1 901 . + . ID=PYKI01000921.1:1..901;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000921.1 Genbank pseudogene 23 811 . - . ID=gene-C9F07_08395;Name=C9F07_08395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08395;pseudo=true PYKI01000921.1 Protein Homology CDS 23 811 . - 0 ID=cds-C9F07_08395;Parent=gene-C9F07_08395;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=C9F07_08395;product=type IV pili twitching motility protein PilT;pseudo=true;transl_table=11 ##sequence-region PYKI01002531.1 1 900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002531.1 Genbank region 1 900 . + . ID=PYKI01002531.1:1..900;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002531.1 Genbank gene 1 531 . - . ID=gene-C9F07_25115;Name=opgC;gbkey=Gene;gene=opgC;gene_biotype=protein_coding;gene_synonym=mdoC;locus_tag=C9F07_25115;partial=true;start_range=.,1 PYKI01002531.1 Protein Homology CDS 1 531 . - 0 ID=cds-TGD50036.1;Parent=gene-C9F07_25115;Dbxref=NCBI_GP:TGD50036.1;Name=TGD50036.1;Note=required for the transfer of succinyl residues to osmoregulated periplasmic glucans;gbkey=CDS;gene=opgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455643.1;locus_tag=C9F07_25115;partial=true;product=glucan biosynthesis protein C;protein_id=TGD50036.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000414.1 1 900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000414.1 Genbank region 1 900 . + . ID=PYKI01000414.1:1..900;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000414.1 Genbank pseudogene 48 359 . - . ID=gene-C9F07_03180;Name=C9F07_03180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03180;pseudo=true PYKI01000414.1 Protein Homology CDS 48 359 . - 0 ID=cds-C9F07_03180;Parent=gene-C9F07_03180;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458290.1;locus_tag=C9F07_03180;product=dipeptide ABC transporter permease DppB;pseudo=true;transl_table=11 PYKI01000414.1 Genbank gene 516 900 . - . ID=gene-C9F07_03185;Name=C9F07_03185;end_range=900,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03185;partial=true PYKI01000414.1 Protein Homology CDS 516 900 . - 1 ID=cds-TGE20939.1;Parent=gene-C9F07_03185;Dbxref=NCBI_GP:TGE20939.1;Name=TGE20939.1;Note=DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides;end_range=900,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458289.1;locus_tag=C9F07_03185;partial=true;product=ABC transporter substrate-binding protein;protein_id=TGE20939.1;transl_table=11 ##sequence-region PYKI01001969.1 1 3645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001969.1 Genbank region 1 3645 . + . ID=PYKI01001969.1:1..3645;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001969.1 Genbank gene 1 526 . - . ID=gene-C9F07_18980;Name=C9F07_18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18980;partial=true;start_range=.,1 PYKI01001969.1 Protein Homology CDS 1 526 . - 0 ID=cds-TGD60319.1;Parent=gene-C9F07_18980;Dbxref=NCBI_GP:TGD60319.1;Name=TGD60319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462999.1;locus_tag=C9F07_18980;partial=true;product=phosphoenolpyruvate carboxylase;protein_id=TGD60319.1;start_range=.,1;transl_table=11 PYKI01001969.1 Genbank pseudogene 734 859 . - . ID=gene-C9F07_18985;Name=C9F07_18985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18985;pseudo=true PYKI01001969.1 Protein Homology CDS 734 859 . - 0 ID=cds-C9F07_18985;Parent=gene-C9F07_18985;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800205.1;locus_tag=C9F07_18985;product=acetylornithine deacetylase;pseudo=true;transl_table=11 PYKI01001969.1 Genbank pseudogene 918 2069 . - . ID=gene-C9F07_18990;Name=C9F07_18990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18990;pseudo=true PYKI01001969.1 Protein Homology CDS 918 2069 . - 0 ID=cds-C9F07_18990;Parent=gene-C9F07_18990;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122768.1;locus_tag=C9F07_18990;product=acetylornithine deacetylase;pseudo=true;transl_table=11 PYKI01001969.1 Genbank gene 2158 3162 . + . ID=gene-C9F07_18995;Name=C9F07_18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18995 PYKI01001969.1 Protein Homology CDS 2158 3162 . + 0 ID=cds-TGD60318.1;Parent=gene-C9F07_18995;Dbxref=NCBI_GP:TGD60318.1;Name=TGD60318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=C9F07_18995;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=TGD60318.1;transl_table=11 PYKI01001969.1 Genbank gene 3170 3645 . + . ID=gene-C9F07_19000;Name=C9F07_19000;end_range=3645,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19000;partial=true PYKI01001969.1 Protein Homology CDS 3170 3645 . + 0 ID=cds-TGD60320.1;Parent=gene-C9F07_19000;Dbxref=NCBI_GP:TGD60320.1;Name=TGD60320.1;end_range=3645,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=C9F07_19000;partial=true;product=acetylglutamate kinase;protein_id=TGD60320.1;transl_table=11 ##sequence-region PYKI01001606.1 1 900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001606.1 Genbank region 1 900 . + . ID=PYKI01001606.1:1..900;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001606.1 Genbank pseudogene 39 900 . - . ID=gene-C9F07_15325;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=pseudogene;locus_tag=C9F07_15325;pseudo=true PYKI01001606.1 Protein Homology CDS 39 900 . - 1 ID=cds-C9F07_15325;Parent=gene-C9F07_15325;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=glpK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457966.1;locus_tag=C9F07_15325;product=glycerol kinase GlpK;pseudo=true;transl_table=11 ##sequence-region PYKI01002474.1 1 900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002474.1 Genbank region 1 900 . + . ID=PYKI01002474.1:1..900;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002474.1 Genbank gene 49 900 . - . ID=gene-C9F07_24435;Name=phnT;end_range=900,.;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=C9F07_24435;partial=true PYKI01002474.1 Protein Homology CDS 49 900 . - 0 ID=cds-TGD50565.1;Parent=gene-C9F07_24435;Dbxref=NCBI_GP:TGD50565.1;Name=TGD50565.1;end_range=900,.;gbkey=CDS;gene=phnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=C9F07_24435;partial=true;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=TGD50565.1;transl_table=11 ##sequence-region PYKI01001838.1 1 900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001838.1 Genbank region 1 900 . + . ID=PYKI01001838.1:1..900;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001838.1 Genbank gene 1 260 . + . ID=gene-C9F07_17675;Name=C9F07_17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17675;partial=true;start_range=.,1 PYKI01001838.1 Protein Homology CDS 1 260 . + 2 ID=cds-TGD63872.1;Parent=gene-C9F07_17675;Dbxref=NCBI_GP:TGD63872.1;Name=TGD63872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001327986.1;locus_tag=C9F07_17675;partial=true;product=hypothetical protein;protein_id=TGD63872.1;start_range=.,1;transl_table=11 PYKI01001838.1 Genbank gene 328 900 . + . ID=gene-C9F07_17680;Name=C9F07_17680;end_range=900,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17680;partial=true PYKI01001838.1 Protein Homology CDS 328 900 . + 0 ID=cds-TGD63873.1;Parent=gene-C9F07_17680;Dbxref=NCBI_GP:TGD63873.1;Name=TGD63873.1;Note=with LivFGHM is involved in the high affinity leucine transport;end_range=900,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458356.1;locus_tag=C9F07_17680;partial=true;product=leucine ABC transporter subunit substrate-binding protein LivK;protein_id=TGD63873.1;transl_table=11 ##sequence-region PYKI01001083.1 1 900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001083.1 Genbank region 1 900 . + . ID=PYKI01001083.1:1..900;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001083.1 Genbank gene 1 322 . + . ID=gene-C9F07_10090;Name=C9F07_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10090;partial=true;start_range=.,1 PYKI01001083.1 Protein Homology CDS 1 322 . + 1 ID=cds-TGD95658.1;Parent=gene-C9F07_10090;Dbxref=NCBI_GP:TGD95658.1;Name=TGD95658.1;Note=HMP-PP phosphatase%3B catalyzes the hydrolysis of 4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5-hydroxymethylpyrimidine phosphate (HMP-P);gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455054.1;locus_tag=C9F07_10090;partial=true;product=HMP-PP phosphatase;protein_id=TGD95658.1;start_range=.,1;transl_table=11 PYKI01001083.1 Genbank gene 372 900 . - . ID=gene-C9F07_10095;Name=C9F07_10095;end_range=900,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10095;partial=true PYKI01001083.1 Protein Homology CDS 372 900 . - 1 ID=cds-TGD95659.1;Parent=gene-C9F07_10095;Dbxref=NCBI_GP:TGD95659.1;Name=TGD95659.1;end_range=900,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455056.1;locus_tag=C9F07_10095;partial=true;product=cysteine synthase;protein_id=TGD95659.1;transl_table=11 ##sequence-region PYKI01002118.1 1 899 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002118.1 Genbank region 1 899 . + . ID=PYKI01002118.1:1..899;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002118.1 Genbank gene 1 245 . + . ID=gene-C9F07_20510;Name=C9F07_20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20510;partial=true;start_range=.,1 PYKI01002118.1 Protein Homology CDS 1 245 . + 2 ID=cds-TGD58326.1;Parent=gene-C9F07_20510;Dbxref=NCBI_GP:TGD58326.1;Name=TGD58326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312470.1;locus_tag=C9F07_20510;partial=true;product=glycine--tRNA ligase subunit alpha;protein_id=TGD58326.1;start_range=.,1;transl_table=11 PYKI01002118.1 Genbank gene 255 899 . + . ID=gene-C9F07_20515;Name=glyS;end_range=899,.;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=C9F07_20515;partial=true PYKI01002118.1 Protein Homology CDS 255 899 . + 0 ID=cds-TGD58327.1;Parent=gene-C9F07_20515;Dbxref=NCBI_GP:TGD58327.1;Name=TGD58327.1;Note=glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;end_range=899,.;gbkey=CDS;gene=glyS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=C9F07_20515;partial=true;product=glycine--tRNA ligase subunit beta;protein_id=TGD58327.1;transl_table=11 ##sequence-region PYKI01002038.1 1 899 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002038.1 Genbank region 1 899 . + . ID=PYKI01002038.1:1..899;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002038.1 Genbank gene 1 754 . - . ID=gene-C9F07_19710;Name=C9F07_19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19710;partial=true;start_range=.,1 PYKI01002038.1 Protein Homology CDS 1 754 . - 0 ID=cds-TGD60001.1;Parent=gene-C9F07_19710;Dbxref=NCBI_GP:TGD60001.1;Name=TGD60001.1;Note=catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine%2C ammonia and carbon dioxide in arginine degradation;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456206.1;locus_tag=C9F07_19710;partial=true;product=succinylarginine dihydrolase;protein_id=TGD60001.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000302.1 1 899 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000302.1 Genbank region 1 899 . + . ID=PYKI01000302.1:1..899;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000302.1 Genbank gene 94 899 . - . ID=gene-C9F07_02005;Name=C9F07_02005;end_range=899,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02005;partial=true PYKI01000302.1 Protein Homology CDS 94 899 . - 2 ID=cds-TGE27796.1;Parent=gene-C9F07_02005;Dbxref=NCBI_GP:TGE27796.1;Name=TGE27796.1;end_range=899,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=C9F07_02005;partial=true;product=motility protein MotB;protein_id=TGE27796.1;transl_table=11 ##sequence-region PYKI01002965.1 1 898 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002965.1 Genbank region 1 898 . + . ID=PYKI01002965.1:1..898;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002965.1 Genbank gene 1 443 . - . ID=gene-C9F07_29720;Name=C9F07_29720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29720;partial=true;start_range=.,1 PYKI01002965.1 Protein Homology CDS 1 443 . - 0 ID=cds-TGD41792.1;Parent=gene-C9F07_29720;Dbxref=NCBI_GP:TGD41792.1;Name=TGD41792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458512.1;locus_tag=C9F07_29720;partial=true;product=23S rRNA pseudouridine synthase F;protein_id=TGD41792.1;start_range=.,1;transl_table=11 PYKI01002965.1 Genbank gene 490 898 . - . ID=gene-C9F07_29725;Name=C9F07_29725;end_range=898,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29725;partial=true PYKI01002965.1 Protein Homology CDS 490 898 . - 1 ID=cds-TGD41793.1;Parent=gene-C9F07_29725;Dbxref=NCBI_GP:TGD41793.1;Name=TGD41793.1;end_range=898,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458511.1;locus_tag=C9F07_29725;partial=true;product=DUF2058 domain-containing protein;protein_id=TGD41793.1;transl_table=11 ##sequence-region PYKI01003377.1 1 898 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003377.1 Genbank region 1 898 . + . ID=PYKI01003377.1:1..898;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003377.1 Genbank gene 1 602 . + . ID=gene-C9F07_34010;Name=C9F07_34010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34010;partial=true;start_range=.,1 PYKI01003377.1 Protein Homology CDS 1 602 . + 2 ID=cds-TGD34430.1;Parent=gene-C9F07_34010;Dbxref=NCBI_GP:TGD34430.1;Name=TGD34430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457056.1;locus_tag=C9F07_34010;partial=true;product=cytoskeleton protein RodZ;protein_id=TGD34430.1;start_range=.,1;transl_table=11 PYKI01003377.1 Genbank gene 629 898 . + . ID=gene-C9F07_34015;Name=C9F07_34015;end_range=898,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34015;partial=true PYKI01003377.1 Protein Homology CDS 629 898 . + 0 ID=cds-TGD34431.1;Parent=gene-C9F07_34015;Dbxref=NCBI_GP:TGD34431.1;Name=TGD34431.1;end_range=898,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311404.1;locus_tag=C9F07_34015;partial=true;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=TGD34431.1;transl_table=11 ##sequence-region PYKI01003124.1 1 3645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003124.1 Genbank region 1 3645 . + . ID=PYKI01003124.1:1..3645;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003124.1 Genbank gene 1 687 . - . ID=gene-C9F07_31250;Name=qseF;gbkey=Gene;gene=qseF;gene_biotype=protein_coding;locus_tag=C9F07_31250;partial=true;start_range=.,1 PYKI01003124.1 Protein Homology CDS 1 687 . - 0 ID=cds-TGD39159.1;Parent=gene-C9F07_31250;Dbxref=NCBI_GP:TGD39159.1;Name=TGD39159.1;gbkey=CDS;gene=qseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457092.1;locus_tag=C9F07_31250;partial=true;product=two-component system response regulator QseF/GlrR;protein_id=TGD39159.1;start_range=.,1;transl_table=11 PYKI01003124.1 Genbank gene 684 1448 . - . ID=gene-C9F07_31255;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=C9F07_31255 PYKI01003124.1 Protein Homology CDS 684 1448 . - 0 ID=cds-TGD39160.1;Parent=gene-C9F07_31255;Dbxref=NCBI_GP:TGD39160.1;Name=TGD39160.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457093.1;locus_tag=C9F07_31255;product=two-component system QseEF-associated lipoprotein QseG;protein_id=TGD39160.1;transl_table=11 PYKI01003124.1 Genbank gene 1450 2835 . - . ID=gene-C9F07_31260;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=C9F07_31260 PYKI01003124.1 Protein Homology CDS 1450 2835 . - 0 ID=cds-TGD39161.1;Parent=gene-C9F07_31260;Dbxref=NCBI_GP:TGD39161.1;Name=TGD39161.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457094.1;locus_tag=C9F07_31260;product=two component system sensor histidine kinase QseE/GlrK;protein_id=TGD39161.1;transl_table=11 PYKI01003124.1 Genbank gene 3529 3645 . - . ID=gene-C9F07_31265;Name=C9F07_31265;end_range=3645,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31265;partial=true PYKI01003124.1 Protein Homology CDS 3529 3645 . - 0 ID=cds-TGD39162.1;Parent=gene-C9F07_31265;Dbxref=NCBI_GP:TGD39162.1;Name=TGD39162.1;end_range=3645,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13507.4;locus_tag=C9F07_31265;partial=true;product=hypothetical protein;protein_id=TGD39162.1;transl_table=11 ##sequence-region PYKI01001423.1 1 897 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001423.1 Genbank region 1 897 . + . ID=PYKI01001423.1:1..897;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001423.1 Genbank gene 1 454 . + . ID=gene-C9F07_13485;Name=C9F07_13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13485;partial=true;start_range=.,1 PYKI01001423.1 Protein Homology CDS 1 454 . + 1 ID=cds-TGD83731.1;Parent=gene-C9F07_13485;Dbxref=NCBI_GP:TGD83731.1;Name=TGD83731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=C9F07_13485;partial=true;product=chitooligosaccharide deacetylase;protein_id=TGD83731.1;start_range=.,1;transl_table=11 PYKI01001423.1 Genbank gene 498 897 . - . ID=gene-C9F07_13490;Name=katE;end_range=897,.;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=C9F07_13490;partial=true PYKI01001423.1 Protein Homology CDS 498 897 . - 1 ID=cds-TGD83732.1;Parent=gene-C9F07_13490;Dbxref=NCBI_GP:TGD83732.1;Name=TGD83732.1;Note=Catalase HPII%3B monofunctional catalase that decomposes hydrogen peroxide into water and oxygen%3B serves to protect cells from the toxic effects of hydrogen peroxide;end_range=897,.;gbkey=CDS;gene=katE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=C9F07_13490;partial=true;product=catalase HPII;protein_id=TGD83732.1;transl_table=11 ##sequence-region PYKI01002739.1 1 897 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002739.1 Genbank region 1 897 . + . ID=PYKI01002739.1:1..897;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002739.1 Genbank gene 181 801 . + . ID=gene-C9F07_27350;Name=C9F07_27350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27350 PYKI01002739.1 Protein Homology CDS 181 801 . + 0 ID=cds-TGD47183.1;Parent=gene-C9F07_27350;Dbxref=NCBI_GP:TGD47183.1;Name=TGD47183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=C9F07_27350;product=superoxide dismutase [Mn];protein_id=TGD47183.1;transl_table=11 ##sequence-region PYKI01003509.1 1 896 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003509.1 Genbank region 1 896 . + . ID=PYKI01003509.1:1..896;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003509.1 Genbank gene 48 896 . + . ID=gene-C9F07_35390;Name=C9F07_35390;end_range=896,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35390;partial=true PYKI01003509.1 Protein Homology CDS 48 896 . + 0 ID=cds-TGD31877.1;Parent=gene-C9F07_35390;Dbxref=NCBI_GP:TGD31877.1;Name=TGD31877.1;end_range=896,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457409.1;locus_tag=C9F07_35390;partial=true;product=LysR family transcriptional regulator;protein_id=TGD31877.1;transl_table=11 ##sequence-region PYKI01001613.1 1 894 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001613.1 Genbank region 1 894 . + . ID=PYKI01001613.1:1..894;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001613.1 Genbank pseudogene 66 894 . + . ID=gene-C9F07_15370;Name=C9F07_15370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15370;pseudo=true PYKI01001613.1 Protein Homology CDS 66 894 . + 0 ID=cds-C9F07_15370;Parent=gene-C9F07_15370;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457451.1;locus_tag=C9F07_15370;product=glycine dehydrogenase (aminomethyl-transferring);pseudo=true;transl_table=11 ##sequence-region PYKI01002753.1 1 893 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002753.1 Genbank region 1 893 . + . ID=PYKI01002753.1:1..893;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002753.1 Genbank gene 1 279 . - . ID=gene-C9F07_27480;Name=C9F07_27480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27480;partial=true;start_range=.,1 PYKI01002753.1 Protein Homology CDS 1 279 . - 0 ID=cds-TGD46846.1;Parent=gene-C9F07_27480;Dbxref=NCBI_GP:TGD46846.1;Name=TGD46846.1;Note=biodegradative%3B catalyzes the formation of agmatine from arginine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418541.2;locus_tag=C9F07_27480;partial=true;product=arginine decarboxylase;protein_id=TGD46846.1;start_range=.,1;transl_table=11 PYKI01002753.1 Genbank pseudogene 512 856 . - . ID=gene-C9F07_27485;Name=C9F07_27485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27485;pseudo=true PYKI01002753.1 Protein Homology CDS 512 856 . - 0 ID=cds-C9F07_27485;Parent=gene-C9F07_27485;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458596.1;locus_tag=C9F07_27485;product=transcriptional regulator MelR;pseudo=true;transl_table=11 ##sequence-region PYKI01002381.1 1 892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002381.1 Genbank region 1 892 . + . ID=PYKI01002381.1:1..892;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002381.1 Genbank pseudogene 33 680 . + . ID=gene-C9F07_23420;Name=C9F07_23420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23420;pseudo=true PYKI01002381.1 Protein Homology CDS 33 680 . + 0 ID=cds-C9F07_23420;Parent=gene-C9F07_23420;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457148.1;locus_tag=C9F07_23420;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002381.1 Genbank gene 745 892 . + . ID=gene-C9F07_23425;Name=C9F07_23425;end_range=892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23425;partial=true PYKI01002381.1 Protein Homology CDS 745 892 . + 0 ID=cds-TGD52414.1;Parent=gene-C9F07_23425;Dbxref=NCBI_GP:TGD52414.1;Name=TGD52414.1;end_range=892,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457149.3;locus_tag=C9F07_23425;partial=true;product=hypothetical protein;protein_id=TGD52414.1;transl_table=11 ##sequence-region PYKI01001132.1 1 892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001132.1 Genbank region 1 892 . + . ID=PYKI01001132.1:1..892;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001132.1 Genbank gene 1 892 . + . ID=gene-C9F07_10555;Name=C9F07_10555;end_range=892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10555;partial=true;start_range=.,1 PYKI01001132.1 Protein Homology CDS 1 892 . + 2 ID=cds-TGD94689.1;Parent=gene-C9F07_10555;Dbxref=NCBI_GP:TGD94689.1;Name=TGD94689.1;end_range=892,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=C9F07_10555;partial=true;product=acyl-CoA thioesterase;protein_id=TGD94689.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002289.1 1 892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002289.1 Genbank region 1 892 . + . ID=PYKI01002289.1:1..892;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002289.1 Genbank gene 303 467 . + . ID=gene-C9F07_22475;Name=C9F07_22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22475 PYKI01002289.1 Protein Homology CDS 303 467 . + 0 ID=cds-TGD54674.1;Parent=gene-C9F07_22475;Dbxref=NCBI_GP:TGD54674.1;Name=TGD54674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=C9F07_22475;product=hypothetical protein;protein_id=TGD54674.1;transl_table=11 PYKI01002289.1 Genbank gene 692 892 . + . ID=gene-C9F07_22480;Name=C9F07_22480;end_range=892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22480;partial=true PYKI01002289.1 Protein Homology CDS 692 892 . + 0 ID=cds-TGD54675.1;Parent=gene-C9F07_22480;Dbxref=NCBI_GP:TGD54675.1;Name=TGD54675.1;end_range=892,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=C9F07_22480;partial=true;product=serine/threonine-protein phosphatase;protein_id=TGD54675.1;transl_table=11 ##sequence-region PYKI01001813.1 1 892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001813.1 Genbank region 1 892 . + . ID=PYKI01001813.1:1..892;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001813.1 Genbank gene 1 892 . + . ID=gene-C9F07_17435;Name=C9F07_17435;end_range=892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17435;partial=true;start_range=.,1 PYKI01001813.1 Protein Homology CDS 1 892 . + 1 ID=cds-TGD65295.1;Parent=gene-C9F07_17435;Dbxref=NCBI_GP:TGD65295.1;Name=TGD65295.1;end_range=892,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=C9F07_17435;partial=true;product=type VI secretion system baseplate subunit TssK;protein_id=TGD65295.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001742.1 1 891 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001742.1 Genbank region 1 891 . + . ID=PYKI01001742.1:1..891;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001742.1 Genbank gene 1 547 . - . ID=gene-C9F07_16660;Name=C9F07_16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16660;partial=true;start_range=.,1 PYKI01001742.1 Protein Homology CDS 1 547 . - 0 ID=cds-TGD68476.1;Parent=gene-C9F07_16660;Dbxref=NCBI_GP:TGD68476.1;Name=TGD68476.1;Note=FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456920.1;locus_tag=C9F07_16660;partial=true;product=beta-ketoacyl-[acyl-carrier-protein] synthase I;protein_id=TGD68476.1;start_range=.,1;transl_table=11 PYKI01001742.1 Genbank gene 647 891 . + . ID=gene-C9F07_16665;Name=mnmC;end_range=891,.;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;gene_synonym=trmC,yfcK;locus_tag=C9F07_16665;partial=true PYKI01001742.1 Protein Homology CDS 647 891 . + 0 ID=cds-TGD68477.1;Parent=gene-C9F07_16665;Dbxref=NCBI_GP:TGD68477.1;Name=TGD68477.1;Note=5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme;end_range=891,.;gbkey=CDS;gene=mnmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456921.3;locus_tag=C9F07_16665;partial=true;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=TGD68477.1;transl_table=11 ##sequence-region PYKI01001445.1 1 3637 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001445.1 Genbank region 1 3637 . + . ID=PYKI01001445.1:1..3637;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001445.1 Genbank pseudogene 4 1143 . - . ID=gene-C9F07_13680;Name=C9F07_13680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13680;pseudo=true PYKI01001445.1 Protein Homology CDS 4 1143 . - 0 ID=cds-C9F07_13680;Parent=gene-C9F07_13680;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456669.1;locus_tag=C9F07_13680;product=diguanylate cyclase;pseudo=true;transl_table=11 PYKI01001445.1 Genbank gene 1474 2115 . + . ID=gene-C9F07_13685;Name=C9F07_13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13685 PYKI01001445.1 Protein Homology CDS 1474 2115 . + 0 ID=cds-TGD83680.1;Parent=gene-C9F07_13685;Dbxref=NCBI_GP:TGD83680.1;Name=TGD83680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456668.1;locus_tag=C9F07_13685;product=uridine kinase;protein_id=TGD83680.1;transl_table=11 PYKI01001445.1 Genbank gene 2206 2787 . + . ID=gene-C9F07_13690;Name=C9F07_13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13690 PYKI01001445.1 Protein Homology CDS 2206 2787 . + 0 ID=cds-TGD83681.1;Parent=gene-C9F07_13690;Dbxref=NCBI_GP:TGD83681.1;Name=TGD83681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456667.1;locus_tag=C9F07_13690;product=dCTP deaminase;protein_id=TGD83681.1;transl_table=11 PYKI01001445.1 Genbank gene 2826 3637 . + . ID=gene-C9F07_13695;Name=C9F07_13695;end_range=3637,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13695;partial=true PYKI01001445.1 Protein Homology CDS 2826 3637 . + 0 ID=cds-TGD83682.1;Parent=gene-C9F07_13695;Dbxref=NCBI_GP:TGD83682.1;Name=TGD83682.1;end_range=3637,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=C9F07_13695;partial=true;product=outer membrane assembly protein AsmA;protein_id=TGD83682.1;transl_table=11 ##sequence-region PYKI01001435.1 1 891 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001435.1 Genbank region 1 891 . + . ID=PYKI01001435.1:1..891;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001435.1 Genbank gene 1 330 . - . ID=gene-C9F07_13585;Name=C9F07_13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13585;partial=true;start_range=.,1 PYKI01001435.1 Protein Homology CDS 1 330 . - 0 ID=cds-TGD83701.1;Parent=gene-C9F07_13585;Dbxref=NCBI_GP:TGD83701.1;Name=TGD83701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=C9F07_13585;partial=true;product=molybdenum cofactor biosynthesis protein;protein_id=TGD83701.1;start_range=.,1;transl_table=11 PYKI01001435.1 Genbank gene 394 891 . - . ID=gene-C9F07_13590;Name=C9F07_13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13590 PYKI01001435.1 Protein Homology CDS 394 891 . - 0 ID=cds-TGD83702.1;Parent=gene-C9F07_13590;Dbxref=NCBI_GP:TGD83702.1;Name=TGD83702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001652129.1;locus_tag=C9F07_13590;product=molybdenum cofactor biosynthesis protein A;protein_id=TGD83702.1;transl_table=11 ##sequence-region PYKI01002667.1 1 890 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002667.1 Genbank region 1 890 . + . ID=PYKI01002667.1:1..890;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002667.1 Genbank gene 1 526 . - . ID=gene-C9F07_26555;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=C9F07_26555;partial=true;start_range=.,1 PYKI01002667.1 Protein Homology CDS 1 526 . - 0 ID=cds-TGD48988.1;Parent=gene-C9F07_26555;Dbxref=NCBI_GP:TGD48988.1;Name=TGD48988.1;Note=regulates the expression of citrate fermentation genes;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455203.1;locus_tag=C9F07_26555;partial=true;product=response regulator;protein_id=TGD48988.1;start_range=.,1;transl_table=11 PYKI01002667.1 Genbank gene 495 890 . - . ID=gene-C9F07_26560;Name=dpiB;end_range=890,.;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;gene_synonym=citA;locus_tag=C9F07_26560;partial=true PYKI01002667.1 Protein Homology CDS 495 890 . - 0 ID=cds-TGD48987.1;Parent=gene-C9F07_26560;Dbxref=NCBI_GP:TGD48987.1;Name=TGD48987.1;Note=regulates the expression of citrate fermentation genes;end_range=890,.;gbkey=CDS;gene=dpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455202.1;locus_tag=C9F07_26560;partial=true;product=histidine kinase;protein_id=TGD48987.1;transl_table=11 ##sequence-region PYKI01002356.1 1 890 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002356.1 Genbank region 1 890 . + . ID=PYKI01002356.1:1..890;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002356.1 Genbank gene 1 634 . - . ID=gene-C9F07_23150;Name=C9F07_23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23150;partial=true;start_range=.,1 PYKI01002356.1 Protein Homology CDS 1 634 . - 0 ID=cds-TGD53175.1;Parent=gene-C9F07_23150;Dbxref=NCBI_GP:TGD53175.1;Name=TGD53175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=C9F07_23150;partial=true;product=isocitrate dehydrogenase;protein_id=TGD53175.1;start_range=.,1;transl_table=11 PYKI01002356.1 Genbank gene 806 890 . + . ID=gene-C9F07_23155;Name=C9F07_23155;end_range=890,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23155;partial=true PYKI01002356.1 Protein Homology CDS 806 890 . + 0 ID=cds-TGD53176.1;Parent=gene-C9F07_23155;Dbxref=NCBI_GP:TGD53176.1;Name=TGD53176.1;end_range=890,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455729.1;locus_tag=C9F07_23155;partial=true;product=23S rRNA pseudouridine synthase E;protein_id=TGD53176.1;transl_table=11 ##sequence-region PYKI01003198.1 1 890 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003198.1 Genbank region 1 890 . + . ID=PYKI01003198.1:1..890;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003198.1 Genbank gene 1 258 . - . ID=gene-C9F07_32140;Name=C9F07_32140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32140;partial=true;start_range=.,1 PYKI01003198.1 Protein Homology CDS 1 258 . - 0 ID=cds-TGD37303.1;Parent=gene-C9F07_32140;Dbxref=NCBI_GP:TGD37303.1;Name=TGD37303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457501.1;locus_tag=C9F07_32140;partial=true;product=hypothetical protein;protein_id=TGD37303.1;start_range=.,1;transl_table=11 PYKI01003198.1 Genbank pseudogene 258 803 . - . ID=gene-C9F07_32145;Name=C9F07_32145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32145;pseudo=true PYKI01003198.1 Protein Homology CDS 258 803 . - 0 ID=cds-C9F07_32145;Parent=gene-C9F07_32145;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457502.1;locus_tag=C9F07_32145;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;pseudo=true;transl_table=11 ##sequence-region PYKI01001265.1 1 889 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001265.1 Genbank region 1 889 . + . ID=PYKI01001265.1:1..889;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001265.1 Genbank gene 1 889 . + . ID=gene-C9F07_11840;Name=C9F07_11840;end_range=889,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11840;partial=true;start_range=.,1 PYKI01001265.1 Protein Homology CDS 1 889 . + 2 ID=cds-TGD88809.1;Parent=gene-C9F07_11840;Dbxref=NCBI_GP:TGD88809.1;Name=TGD88809.1;end_range=889,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=C9F07_11840;partial=true;product=multidrug efflux RND transporter permease subunit;protein_id=TGD88809.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000514.1 1 888 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000514.1 Genbank region 1 888 . + . ID=PYKI01000514.1:1..888;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000514.1 Genbank pseudogene 1 309 . + . ID=gene-C9F07_04260;Name=C9F07_04260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04260;pseudo=true PYKI01000514.1 Protein Homology CDS 1 309 . + 0 ID=cds-C9F07_04260;Parent=gene-C9F07_04260;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=C9F07_04260;product=fimbrial protein SthA;pseudo=true;transl_table=11 PYKI01000514.1 Genbank gene 380 888 . + . ID=gene-C9F07_04265;Name=C9F07_04265;end_range=888,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04265;partial=true PYKI01000514.1 Protein Homology CDS 380 888 . + 0 ID=cds-TGE16532.1;Parent=gene-C9F07_04265;Dbxref=NCBI_GP:TGE16532.1;Name=TGE16532.1;end_range=888,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458999.1;locus_tag=C9F07_04265;partial=true;product=fimbrial assembly protein;protein_id=TGE16532.1;transl_table=11 ##sequence-region PYKI01001724.1 1 886 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001724.1 Genbank region 1 886 . + . ID=PYKI01001724.1:1..886;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001724.1 Genbank pseudogene 21 869 . - . ID=gene-C9F07_16480;Name=C9F07_16480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16480;pseudo=true PYKI01001724.1 Protein Homology CDS 21 869 . - 0 ID=cds-C9F07_16480;Parent=gene-C9F07_16480;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253684.1;locus_tag=C9F07_16480;product=gluconate:proton symporter;pseudo=true;transl_table=11 ##sequence-region PYKI01003422.1 1 886 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003422.1 Genbank region 1 886 . + . ID=PYKI01003422.1:1..886;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003422.1 Genbank gene 1 886 . - . ID=gene-C9F07_34410;Name=C9F07_34410;end_range=886,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34410;partial=true;start_range=.,1 PYKI01003422.1 Protein Homology CDS 1 886 . - 1 ID=cds-TGD33614.1;Parent=gene-C9F07_34410;Dbxref=NCBI_GP:TGD33614.1;Name=TGD33614.1;Note=DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides;end_range=886,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=C9F07_34410;partial=true;product=ABC transporter substrate-binding protein;protein_id=TGD33614.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001416.1 1 885 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001416.1 Genbank region 1 885 . + . ID=PYKI01001416.1:1..885;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001416.1 Genbank gene 1 433 . - . ID=gene-C9F07_13425;Name=C9F07_13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13425;partial=true;start_range=.,1 PYKI01001416.1 Protein Homology CDS 1 433 . - 0 ID=cds-TGD83774.1;Parent=gene-C9F07_13425;Dbxref=NCBI_GP:TGD83774.1;Name=TGD83774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=C9F07_13425;partial=true;product=AraC family transcriptional regulator;protein_id=TGD83774.1;start_range=.,1;transl_table=11 PYKI01001416.1 Genbank gene 459 885 . - . ID=gene-C9F07_13430;Name=C9F07_13430;end_range=885,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13430;partial=true PYKI01001416.1 Protein Homology CDS 459 885 . - 1 ID=cds-TGD83775.1;Parent=gene-C9F07_13430;Dbxref=NCBI_GP:TGD83775.1;Name=TGD83775.1;end_range=885,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=C9F07_13430;partial=true;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=TGD83775.1;transl_table=11 ##sequence-region PYKI01000319.1 1 884 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000319.1 Genbank region 1 884 . + . ID=PYKI01000319.1:1..884;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000319.1 Genbank gene 1 884 . - . ID=gene-C9F07_02205;Name=C9F07_02205;end_range=884,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02205;partial=true;start_range=.,1 PYKI01000319.1 Protein Homology CDS 1 884 . - 1 ID=cds-TGE26884.1;Parent=gene-C9F07_02205;Dbxref=NCBI_GP:TGE26884.1;Name=TGE26884.1;Note=PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues;end_range=884,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456447.1;locus_tag=C9F07_02205;partial=true;product=oligopeptidase B;protein_id=TGE26884.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001484.1 1 3629 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001484.1 Genbank region 1 3629 . + . ID=PYKI01001484.1:1..3629;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001484.1 Genbank pseudogene 49 204 . - . ID=gene-C9F07_14110;Name=C9F07_14110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14110;pseudo=true PYKI01001484.1 Protein Homology CDS 49 204 . - 0 ID=cds-C9F07_14110;Parent=gene-C9F07_14110;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454818.1;locus_tag=C9F07_14110;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001484.1 Genbank gene 357 1784 . - . ID=gene-C9F07_14115;Name=C9F07_14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14115 PYKI01001484.1 Protein Homology CDS 357 1784 . - 0 ID=cds-TGD79298.1;Parent=gene-C9F07_14115;Dbxref=NCBI_GP:TGD79298.1;Name=TGD79298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=C9F07_14115;product=serine endoprotease DegP;protein_id=TGD79298.1;transl_table=11 PYKI01001484.1 Genbank gene 1914 3431 . - . ID=gene-C9F07_14120;Name=C9F07_14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14120 PYKI01001484.1 Protein Homology CDS 1914 3431 . - 0 ID=cds-TGD79299.1;Parent=gene-C9F07_14120;Dbxref=NCBI_GP:TGD79299.1;Name=TGD79299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454816.1;locus_tag=C9F07_14120;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=TGD79299.1;transl_table=11 PYKI01001484.1 Genbank gene 3516 3629 . + . ID=gene-C9F07_14125;Name=C9F07_14125;end_range=3629,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14125;partial=true PYKI01001484.1 Protein Homology CDS 3516 3629 . + 0 ID=cds-TGD79300.1;Parent=gene-C9F07_14125;Dbxref=NCBI_GP:TGD79300.1;Name=TGD79300.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;end_range=3629,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454815.1;locus_tag=C9F07_14125;partial=true;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=TGD79300.1;transl_table=11 ##sequence-region PYKI01002685.1 1 884 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002685.1 Genbank region 1 884 . + . ID=PYKI01002685.1:1..884;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002685.1 Genbank gene 501 884 . - . ID=gene-C9F07_26740;Name=C9F07_26740;end_range=884,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26740;partial=true PYKI01002685.1 Protein Homology CDS 501 884 . - 0 ID=cds-TGD48434.1;Parent=gene-C9F07_26740;Dbxref=NCBI_GP:TGD48434.1;Name=TGD48434.1;end_range=884,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=C9F07_26740;partial=true;product=transporter;protein_id=TGD48434.1;transl_table=11 ##sequence-region PYKI01001884.1 1 883 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001884.1 Genbank region 1 883 . + . ID=PYKI01001884.1:1..883;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001884.1 Genbank pseudogene 74 625 . + . ID=gene-C9F07_18195;Name=folP;gbkey=Gene;gene=folP;gene_biotype=pseudogene;locus_tag=C9F07_18195;pseudo=true PYKI01001884.1 Protein Homology CDS 74 625 . + 0 ID=cds-C9F07_18195;Parent=gene-C9F07_18195;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457674.1;locus_tag=C9F07_18195;product=dihydropteroate synthase;pseudo=true;transl_table=11 PYKI01001884.1 Genbank gene 618 883 . + . ID=gene-C9F07_18200;Name=glmM;end_range=883,.;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=C9F07_18200;partial=true PYKI01001884.1 Protein Homology CDS 618 883 . + 0 ID=cds-TGD62035.1;Parent=gene-C9F07_18200;Dbxref=NCBI_GP:TGD62035.1;Name=TGD62035.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;end_range=883,.;gbkey=CDS;gene=glmM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457673.1;locus_tag=C9F07_18200;partial=true;product=phosphoglucosamine mutase;protein_id=TGD62035.1;transl_table=11 ##sequence-region PYKI01000601.1 1 883 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000601.1 Genbank region 1 883 . + . ID=PYKI01000601.1:1..883;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000601.1 Genbank gene 1 228 . - . ID=gene-C9F07_05135;Name=C9F07_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05135;partial=true;start_range=.,1 PYKI01000601.1 Protein Homology CDS 1 228 . - 0 ID=cds-TGE14058.1;Parent=gene-C9F07_05135;Dbxref=NCBI_GP:TGE14058.1;Name=TGE14058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456942.1;locus_tag=C9F07_05135;partial=true;product=DUF2545 domain-containing protein;protein_id=TGE14058.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002940.1 1 883 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002940.1 Genbank region 1 883 . + . ID=PYKI01002940.1:1..883;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002940.1 Genbank gene 126 883 . + . ID=gene-C9F07_29465;Name=C9F07_29465;end_range=883,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29465;partial=true PYKI01002940.1 Protein Homology CDS 126 883 . + 0 ID=cds-TGD42540.1;Parent=gene-C9F07_29465;Dbxref=NCBI_GP:TGD42540.1;Name=TGD42540.1;end_range=883,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=C9F07_29465;partial=true;product=C4-dicarboxylate ABC transporter;protein_id=TGD42540.1;transl_table=11 ##sequence-region PYKI01001151.1 1 882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001151.1 Genbank region 1 882 . + . ID=PYKI01001151.1:1..882;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001151.1 Genbank gene 1 212 . + . ID=gene-C9F07_10755;Name=C9F07_10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10755;partial=true;start_range=.,1 PYKI01001151.1 Protein Homology CDS 1 212 . + 2 ID=cds-TGD93584.1;Parent=gene-C9F07_10755;Dbxref=NCBI_GP:TGD93584.1;Name=TGD93584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458584.1;locus_tag=C9F07_10755;partial=true;product=formate dehydrogenase;protein_id=TGD93584.1;start_range=.,1;transl_table=11 PYKI01001151.1 Genbank gene 389 882 . + . ID=gene-C9F07_10760;Name=C9F07_10760;end_range=882,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10760;partial=true PYKI01001151.1 Protein Homology CDS 389 882 . + 0 ID=cds-TGD93585.1;Parent=gene-C9F07_10760;Dbxref=NCBI_GP:TGD93585.1;Name=TGD93585.1;end_range=882,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=C9F07_10760;partial=true;product=hypothetical protein;protein_id=TGD93585.1;transl_table=11 ##sequence-region PYKI01001837.1 1 882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001837.1 Genbank region 1 882 . + . ID=PYKI01001837.1:1..882;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001837.1 Genbank gene 1 882 . + . ID=gene-C9F07_17670;Name=C9F07_17670;end_range=882,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17670;partial=true;start_range=.,1 PYKI01001837.1 Protein Homology CDS 1 882 . + 0 ID=cds-TGD63874.1;Parent=gene-C9F07_17670;Dbxref=NCBI_GP:TGD63874.1;Name=TGD63874.1;end_range=882,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457745.1;locus_tag=C9F07_17670;partial=true;product=hypothetical protein;protein_id=TGD63874.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002338.1 1 882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002338.1 Genbank region 1 882 . + . ID=PYKI01002338.1:1..882;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002338.1 Genbank gene 1 410 . + . ID=gene-C9F07_22935;Name=C9F07_22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22935;partial=true;start_range=.,1 PYKI01002338.1 Protein Homology CDS 1 410 . + 2 ID=cds-TGD53621.1;Parent=gene-C9F07_22935;Dbxref=NCBI_GP:TGD53621.1;Name=TGD53621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463399.3;locus_tag=C9F07_22935;partial=true;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=TGD53621.1;start_range=.,1;transl_table=11 PYKI01002338.1 Genbank gene 544 882 . - . ID=gene-C9F07_22940;Name=C9F07_22940;end_range=882,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22940;partial=true PYKI01002338.1 Protein Homology CDS 544 882 . - 0 ID=cds-TGD53622.1;Parent=gene-C9F07_22940;Dbxref=NCBI_GP:TGD53622.1;Name=TGD53622.1;end_range=882,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748831.1;locus_tag=C9F07_22940;partial=true;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=TGD53622.1;transl_table=11 ##sequence-region PYKI01001431.1 1 882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001431.1 Genbank region 1 882 . + . ID=PYKI01001431.1:1..882;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001431.1 Genbank gene 1 168 . + . ID=gene-C9F07_13555;Name=C9F07_13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13555;partial=true;start_range=.,1 PYKI01001431.1 Protein Homology CDS 1 168 . + 0 ID=cds-TGD83708.1;Parent=gene-C9F07_13555;Dbxref=NCBI_GP:TGD83708.1;Name=TGD83708.1;Note=with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456894.1;locus_tag=C9F07_13555;partial=true;product=amino acid ABC transporter permease;protein_id=TGD83708.1;start_range=.,1;transl_table=11 PYKI01001431.1 Genbank gene 182 882 . + . ID=gene-C9F07_13560;Name=C9F07_13560;end_range=882,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13560;partial=true PYKI01001431.1 Protein Homology CDS 182 882 . + 0 ID=cds-TGD83709.1;Parent=gene-C9F07_13560;Dbxref=NCBI_GP:TGD83709.1;Name=TGD83709.1;end_range=882,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=C9F07_13560;partial=true;product=histidine ABC transporter ATP-binding protein HisP;protein_id=TGD83709.1;transl_table=11 ##sequence-region PYKI01003095.1 1 882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003095.1 Genbank region 1 882 . + . ID=PYKI01003095.1:1..882;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003095.1 Genbank gene 1 882 . - . ID=gene-C9F07_30960;Name=C9F07_30960;end_range=882,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30960;partial=true;start_range=.,1 PYKI01003095.1 Protein Homology CDS 1 882 . - 0 ID=cds-TGD40060.1;Parent=gene-C9F07_30960;Dbxref=NCBI_GP:TGD40060.1;Name=TGD40060.1;end_range=882,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=C9F07_30960;partial=true;product=ethanolamine utilization protein EutH;protein_id=TGD40060.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000100.1 1 882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000100.1 Genbank region 1 882 . + . ID=PYKI01000100.1:1..882;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000100.1 Genbank pseudogene 1 775 . - . ID=gene-C9F07_00640;Name=C9F07_00640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00640;pseudo=true PYKI01000100.1 Protein Homology CDS 1 775 . - 0 ID=cds-C9F07_00640;Parent=gene-C9F07_00640;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008783921.1;locus_tag=C9F07_00640;product=two-component system sensor histidine kinase PhoR;pseudo=true;transl_table=11 ##sequence-region PYKI01000917.1 1 3615 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000917.1 Genbank region 1 3615 . + . ID=PYKI01000917.1:1..3615;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000917.1 Genbank gene 1 329 . - . ID=gene-C9F07_08350;Name=C9F07_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08350;partial=true;start_range=.,1 PYKI01000917.1 Protein Homology CDS 1 329 . - 0 ID=cds-TGE03006.1;Parent=gene-C9F07_08350;Dbxref=NCBI_GP:TGE03006.1;Name=TGE03006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455618.1;locus_tag=C9F07_08350;partial=true;product=hypothetical protein;protein_id=TGE03006.1;start_range=.,1;transl_table=11 PYKI01000917.1 Genbank gene 456 704 . - . ID=gene-C9F07_08355;Name=C9F07_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08355 PYKI01000917.1 Protein Homology CDS 456 704 . - 0 ID=cds-TGE03003.1;Parent=gene-C9F07_08355;Dbxref=NCBI_GP:TGE03003.1;Name=TGE03003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344014.1;locus_tag=C9F07_08355;product=hypothetical protein;protein_id=TGE03003.1;transl_table=11 PYKI01000917.1 Genbank gene 751 2259 . + . ID=gene-C9F07_08360;Name=C9F07_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08360 PYKI01000917.1 Protein Homology CDS 751 2259 . + 0 ID=cds-TGE03004.1;Parent=gene-C9F07_08360;Dbxref=NCBI_GP:TGE03004.1;Name=TGE03004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455619.1;locus_tag=C9F07_08360;product=sodium/proline symporter PutP;protein_id=TGE03004.1;transl_table=11 PYKI01000917.1 Genbank gene 2877 3173 . + . ID=gene-C9F07_08365;Name=C9F07_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08365 PYKI01000917.1 Protein Homology CDS 2877 3173 . + 0 ID=cds-TGE03005.1;Parent=gene-C9F07_08365;Dbxref=NCBI_GP:TGE03005.1;Name=TGE03005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000245336.1;locus_tag=C9F07_08365;product=phosphate starvation-inducible protein PhoH;protein_id=TGE03005.1;transl_table=11 PYKI01000917.1 Genbank gene 3086 3615 . + . ID=gene-C9F07_08370;Name=C9F07_08370;end_range=3615,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08370;partial=true PYKI01000917.1 Protein Homology CDS 3086 3615 . + 0 ID=cds-TGE03007.1;Parent=gene-C9F07_08370;Dbxref=NCBI_GP:TGE03007.1;Name=TGE03007.1;end_range=3615,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455620.1;locus_tag=C9F07_08370;partial=true;product=phosphate starvation-inducible protein PhoH;protein_id=TGE03007.1;transl_table=11 ##sequence-region PYKI01001384.1 1 881 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001384.1 Genbank region 1 881 . + . ID=PYKI01001384.1:1..881;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001384.1 Genbank pseudogene 112 564 . + . ID=gene-C9F07_13025;Name=C9F07_13025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13025;pseudo=true PYKI01001384.1 Protein Homology CDS 112 564 . + 0 ID=cds-C9F07_13025;Parent=gene-C9F07_13025;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461862.1;locus_tag=C9F07_13025;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;pseudo=true;transl_table=11 PYKI01001384.1 Genbank gene 575 881 . + . ID=gene-C9F07_13030;Name=cas5e;end_range=881,.;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=C9F07_13030;partial=true PYKI01001384.1 Protein Homology CDS 575 881 . + 0 ID=cds-TGD84368.1;Parent=gene-C9F07_13030;Dbxref=NCBI_GP:TGD84368.1;Name=TGD84368.1;end_range=881,.;gbkey=CDS;gene=cas5e;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461861.1;locus_tag=C9F07_13030;partial=true;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=TGD84368.1;transl_table=11 ##sequence-region PYKI01002978.1 1 880 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002978.1 Genbank region 1 880 . + . ID=PYKI01002978.1:1..880;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002978.1 Genbank gene 1 370 . + . ID=gene-C9F07_29850;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=C9F07_29850;partial=true;start_range=.,1 PYKI01002978.1 Protein Homology CDS 1 370 . + 1 ID=cds-TGD41534.1;Parent=gene-C9F07_29850;Dbxref=NCBI_GP:TGD41534.1;Name=TGD41534.1;gbkey=CDS;gene=pdxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456082.1;locus_tag=C9F07_29850;partial=true;product=pyridoxamine 5'-phosphate oxidase;protein_id=TGD41534.1;start_range=.,1;transl_table=11 PYKI01002978.1 Genbank gene 497 880 . + . ID=gene-C9F07_29855;Name=tyrS;end_range=880,.;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=C9F07_29855;partial=true PYKI01002978.1 Protein Homology CDS 497 880 . + 0 ID=cds-TGD41533.1;Parent=gene-C9F07_29855;Dbxref=NCBI_GP:TGD41533.1;Name=TGD41533.1;end_range=880,.;gbkey=CDS;gene=tyrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456081.1;locus_tag=C9F07_29855;partial=true;product=tyrosine--tRNA ligase;protein_id=TGD41533.1;transl_table=11 ##sequence-region PYKI01002973.1 1 879 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002973.1 Genbank region 1 879 . + . ID=PYKI01002973.1:1..879;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002973.1 Genbank gene 81 482 . - . ID=gene-C9F07_29805;Name=C9F07_29805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29805 PYKI01002973.1 Protein Homology CDS 81 482 . - 0 ID=cds-TGD41600.1;Parent=gene-C9F07_29805;Dbxref=NCBI_GP:TGD41600.1;Name=TGD41600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458337.1;locus_tag=C9F07_29805;product=nickel-responsive transcriptional regulator NikR;protein_id=TGD41600.1;transl_table=11 PYKI01002973.1 Genbank gene 574 879 . - . ID=gene-C9F07_29810;Name=acpT;end_range=879,.;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=C9F07_29810;partial=true PYKI01002973.1 Protein Homology CDS 574 879 . - 0 ID=cds-TGD41601.1;Parent=gene-C9F07_29810;Dbxref=NCBI_GP:TGD41601.1;Name=TGD41601.1;end_range=879,.;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458338.1;locus_tag=C9F07_29810;partial=true;product=4'-phosphopantetheinyl transferase AcpT;protein_id=TGD41601.1;transl_table=11 ##sequence-region PYKI01000531.1 1 877 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000531.1 Genbank region 1 877 . + . ID=PYKI01000531.1:1..877;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000531.1 Genbank gene 1 184 . + . ID=gene-C9F07_04405;Name=C9F07_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04405;partial=true;start_range=.,1 PYKI01000531.1 Protein Homology CDS 1 184 . + 1 ID=cds-TGE15913.1;Parent=gene-C9F07_04405;Dbxref=NCBI_GP:TGE15913.1;Name=TGE15913.1;Note=catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454613.1;locus_tag=C9F07_04405;partial=true;product=homoserine kinase;protein_id=TGE15913.1;start_range=.,1;transl_table=11 PYKI01000531.1 Genbank gene 188 877 . + . ID=gene-C9F07_04410;Name=thrC;end_range=877,.;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=C9F07_04410;partial=true PYKI01000531.1 Protein Homology CDS 188 877 . + 0 ID=cds-TGE15914.1;Parent=gene-C9F07_04410;Dbxref=NCBI_GP:TGE15914.1;Name=TGE15914.1;end_range=877,.;gbkey=CDS;gene=thrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454614.1;locus_tag=C9F07_04410;partial=true;product=threonine synthase;protein_id=TGE15914.1;transl_table=11 ##sequence-region PYKI01001611.1 1 876 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001611.1 Genbank region 1 876 . + . ID=PYKI01001611.1:1..876;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001611.1 Genbank gene 39 876 . + . ID=gene-C9F07_15360;Name=C9F07_15360;end_range=876,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15360;partial=true PYKI01001611.1 Protein Homology CDS 39 876 . + 0 ID=cds-TGD71009.1;Parent=gene-C9F07_15360;Dbxref=NCBI_GP:TGD71009.1;Name=TGD71009.1;Note=thiamindiphosphate-dependent%3B catalyzes the formation of indoleacetaldehyde from indolepyruvate;end_range=876,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751818.1;locus_tag=C9F07_15360;partial=true;product=indolepyruvate decarboxylase;protein_id=TGD71009.1;transl_table=11 ##sequence-region PYKI01001293.1 1 875 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001293.1 Genbank region 1 875 . + . ID=PYKI01001293.1:1..875;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001293.1 Genbank gene 1 748 . - . ID=gene-C9F07_12090;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=C9F07_12090;partial=true;start_range=.,1 PYKI01001293.1 Protein Homology CDS 1 748 . - 0 ID=cds-TGD87618.1;Parent=gene-C9F07_12090;Dbxref=NCBI_GP:TGD87618.1;Name=TGD87618.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=C9F07_12090;partial=true;product=porin OmpD;protein_id=TGD87618.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001123.1 1 875 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001123.1 Genbank region 1 875 . + . ID=PYKI01001123.1:1..875;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001123.1 Genbank gene 43 875 . - . ID=gene-C9F07_10460;Name=C9F07_10460;end_range=875,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10460;partial=true PYKI01001123.1 Protein Homology CDS 43 875 . - 2 ID=cds-TGD94822.1;Parent=gene-C9F07_10460;Dbxref=NCBI_GP:TGD94822.1;Name=TGD94822.1;end_range=875,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001767459.1;locus_tag=C9F07_10460;partial=true;product=sugar ABC transporter ATP-binding protein;protein_id=TGD94822.1;transl_table=11 ##sequence-region PYKI01000616.1 1 873 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000616.1 Genbank region 1 873 . + . ID=PYKI01000616.1:1..873;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000616.1 Genbank gene 1 873 . + . ID=gene-C9F07_05305;Name=metH;end_range=873,.;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=C9F07_05305;partial=true;start_range=.,1 PYKI01000616.1 Protein Homology CDS 1 873 . + 0 ID=cds-TGE13850.1;Parent=gene-C9F07_05305;Dbxref=NCBI_GP:TGE13850.1;Name=TGE13850.1;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;end_range=873,.;gbkey=CDS;gene=metH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463053.3;locus_tag=C9F07_05305;partial=true;product=methionine synthase;protein_id=TGE13850.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003018.1 1 873 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003018.1 Genbank region 1 873 . + . ID=PYKI01003018.1:1..873;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003018.1 Genbank pseudogene 73 873 . - . ID=gene-C9F07_30265;Name=C9F07_30265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30265;pseudo=true PYKI01003018.1 Protein Homology CDS 73 873 . - 0 ID=cds-C9F07_30265;Parent=gene-C9F07_30265;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=C9F07_30265;product=EscD/YscD/HrpQ family type III secretion system inner membrane ring protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001890.1 1 872 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001890.1 Genbank region 1 872 . + . ID=PYKI01001890.1:1..872;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001890.1 Genbank gene 26 872 . + . ID=gene-C9F07_18250;Name=C9F07_18250;end_range=872,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18250;partial=true PYKI01001890.1 Protein Homology CDS 26 872 . + 0 ID=cds-TGD61839.1;Parent=gene-C9F07_18250;Dbxref=NCBI_GP:TGD61839.1;Name=TGD61839.1;Note=may be involved in the translocation of effector proteins into the host cell;end_range=872,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531562.1;locus_tag=C9F07_18250;partial=true;product=pathogenicity island 2 effector protein SseC;protein_id=TGD61839.1;transl_table=11 ##sequence-region PYKI01001341.1 1 3601 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001341.1 Genbank region 1 3601 . + . ID=PYKI01001341.1:1..3601;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001341.1 Genbank pseudogene 35 571 . - . ID=gene-C9F07_12505;Name=C9F07_12505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12505;pseudo=true PYKI01001341.1 Protein Homology CDS 35 571 . - 0 ID=cds-C9F07_12505;Parent=gene-C9F07_12505;Note=catalyzes the formation of malate from fumerate%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458599.1;locus_tag=C9F07_12505;product=fumarate hydratase;pseudo=true;transl_table=11 PYKI01001341.1 Genbank gene 667 2007 . - . ID=gene-C9F07_12510;Name=C9F07_12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12510 PYKI01001341.1 Protein Homology CDS 667 2007 . - 0 ID=cds-TGD85315.1;Parent=gene-C9F07_12510;Dbxref=NCBI_GP:TGD85315.1;Name=TGD85315.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate%2C malate%2C fumarate and succinate) transporters;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=C9F07_12510;product=anaerobic C4-dicarboxylate transporter;protein_id=TGD85315.1;transl_table=11 PYKI01001341.1 Genbank gene 2154 2420 . - . ID=gene-C9F07_12515;Name=C9F07_12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12515 PYKI01001341.1 Protein Homology CDS 2154 2420 . - 0 ID=cds-TGD85316.1;Parent=gene-C9F07_12515;Dbxref=NCBI_GP:TGD85316.1;Name=TGD85316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=C9F07_12515;product=hypothetical protein;protein_id=TGD85316.1;transl_table=11 PYKI01001341.1 Genbank gene 2737 3456 . - . ID=gene-C9F07_12520;Name=C9F07_12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12520 PYKI01001341.1 Protein Homology CDS 2737 3456 . - 0 ID=cds-TGD85317.1;Parent=gene-C9F07_12520;Dbxref=NCBI_GP:TGD85317.1;Name=TGD85317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=C9F07_12520;product=two-component system response regulator DcuR;protein_id=TGD85317.1;transl_table=11 ##sequence-region PYKI01003292.1 1 869 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003292.1 Genbank region 1 869 . + . ID=PYKI01003292.1:1..869;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003292.1 Genbank gene 1 800 . - . ID=gene-C9F07_33110;Name=C9F07_33110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33110;partial=true;start_range=.,1 PYKI01003292.1 Protein Homology CDS 1 800 . - 0 ID=cds-TGD36087.1;Parent=gene-C9F07_33110;Dbxref=NCBI_GP:TGD36087.1;Name=TGD36087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457527.1;locus_tag=C9F07_33110;partial=true;product=xylanase deacetylase;protein_id=TGD36087.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000553.1 1 869 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000553.1 Genbank region 1 869 . + . ID=PYKI01000553.1:1..869;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000553.1 Genbank gene 1 650 . - . ID=gene-C9F07_04630;Name=C9F07_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04630;partial=true;start_range=.,1 PYKI01000553.1 Protein Homology CDS 1 650 . - 0 ID=cds-TGE15097.1;Parent=gene-C9F07_04630;Dbxref=NCBI_GP:TGE15097.1;Name=TGE15097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=C9F07_04630;partial=true;product=shikimate 5-dehydrogenase;protein_id=TGE15097.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003185.1 1 867 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003185.1 Genbank region 1 867 . + . ID=PYKI01003185.1:1..867;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003185.1 Genbank gene 1 76 . + . ID=gene-C9F07_31960;Name=C9F07_31960;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_31960 PYKI01003185.1 tRNAscan-SE tRNA 1 76 . + . ID=rna-C9F07_31960;Parent=gene-C9F07_31960;anticodon=(pos:34..36);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_31960;product=tRNA-Val PYKI01003185.1 tRNAscan-SE exon 1 76 . + . ID=exon-C9F07_31960-1;Parent=rna-C9F07_31960;anticodon=(pos:34..36);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_31960;product=tRNA-Val PYKI01003185.1 Genbank gene 81 156 . + . ID=gene-C9F07_31965;Name=C9F07_31965;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_31965 PYKI01003185.1 tRNAscan-SE tRNA 81 156 . + . ID=rna-C9F07_31965;Parent=gene-C9F07_31965;anticodon=(pos:114..116);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_31965;product=tRNA-Lys PYKI01003185.1 tRNAscan-SE exon 81 156 . + . ID=exon-C9F07_31965-1;Parent=rna-C9F07_31965;anticodon=(pos:114..116);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_31965;product=tRNA-Lys PYKI01003185.1 Genbank gene 320 867 . - . ID=gene-C9F07_31970;Name=C9F07_31970;end_range=867,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31970;partial=true PYKI01003185.1 Protein Homology CDS 320 867 . - 2 ID=cds-TGD37543.1;Parent=gene-C9F07_31970;Dbxref=NCBI_GP:TGD37543.1;Name=TGD37543.1;end_range=867,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=C9F07_31970;partial=true;product=LysR family transcriptional regulator;protein_id=TGD37543.1;transl_table=11 ##sequence-region PYKI01001128.1 1 867 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001128.1 Genbank region 1 867 . + . ID=PYKI01001128.1:1..867;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001128.1 Genbank gene 1 280 . + . ID=gene-C9F07_10515;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=C9F07_10515;partial=true;start_range=.,1 PYKI01001128.1 Protein Homology CDS 1 280 . + 1 ID=cds-TGD94755.1;Parent=gene-C9F07_10515;Dbxref=NCBI_GP:TGD94755.1;Name=TGD94755.1;Note=in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121856.1;locus_tag=C9F07_10515;partial=true;product=molybdenum cofactor guanylyltransferase MobA;protein_id=TGD94755.1;start_range=.,1;transl_table=11 PYKI01001128.1 Genbank gene 277 801 . + . ID=gene-C9F07_10520;Name=C9F07_10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10520 PYKI01001128.1 Protein Homology CDS 277 801 . + 0 ID=cds-TGD94756.1;Parent=gene-C9F07_10520;Dbxref=NCBI_GP:TGD94756.1;Name=TGD94756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406202.1;locus_tag=C9F07_10520;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=TGD94756.1;transl_table=11 ##sequence-region PYKI01001889.1 1 867 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001889.1 Genbank region 1 867 . + . ID=PYKI01001889.1:1..867;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001889.1 Genbank pseudogene 26 142 . - . ID=gene-C9F07_18235;Name=C9F07_18235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18235;pseudo=true PYKI01001889.1 Protein Homology CDS 26 142 . - 0 ID=cds-C9F07_18235;Parent=gene-C9F07_18235;Note=represses the celABCDF-ydjC operon involved in carbon uptake%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456197.1;locus_tag=C9F07_18235;product=transcriptional regulator ChbR;pseudo=true;transl_table=11 PYKI01001889.1 Genbank gene 153 500 . - . ID=gene-C9F07_18240;Name=C9F07_18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18240 PYKI01001889.1 Protein Homology CDS 153 500 . - 0 ID=cds-TGD61890.1;Parent=gene-C9F07_18240;Dbxref=NCBI_GP:TGD61890.1;Name=TGD61890.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=C9F07_18240;product=PTS N N'-diacetylchitobiose transporter subunit IIA;protein_id=TGD61890.1;transl_table=11 PYKI01001889.1 Genbank gene 551 867 . - . ID=gene-C9F07_18245;Name=C9F07_18245;end_range=867,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18245;partial=true PYKI01001889.1 Protein Homology CDS 551 867 . - 2 ID=cds-TGD61891.1;Parent=gene-C9F07_18245;Dbxref=NCBI_GP:TGD61891.1;Name=TGD61891.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;end_range=867,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456199.1;locus_tag=C9F07_18245;partial=true;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=TGD61891.1;transl_table=11 ##sequence-region PYKI01000494.1 1 867 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000494.1 Genbank region 1 867 . + . ID=PYKI01000494.1:1..867;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000494.1 Genbank gene 1 867 . - . ID=gene-C9F07_04005;Name=C9F07_04005;end_range=867,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04005;partial=true;start_range=.,1 PYKI01000494.1 Protein Homology CDS 1 867 . - 0 ID=cds-TGE17619.1;Parent=gene-C9F07_04005;Dbxref=NCBI_GP:TGE17619.1;Name=TGE17619.1;end_range=867,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9F07_04005;partial=true;product=hypothetical protein;protein_id=TGE17619.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003288.1 1 867 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003288.1 Genbank region 1 867 . + . ID=PYKI01003288.1:1..867;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003288.1 Genbank gene 1 122 . + . ID=gene-C9F07_33080;Name=C9F07_33080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33080;partial=true;start_range=.,1 PYKI01003288.1 Protein Homology CDS 1 122 . + 2 ID=cds-TGD36106.1;Parent=gene-C9F07_33080;Dbxref=NCBI_GP:TGD36106.1;Name=TGD36106.1;Note=involved in methylation of ribosomal protein L3;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456926.1;locus_tag=C9F07_33080;partial=true;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=TGD36106.1;start_range=.,1;transl_table=11 PYKI01003288.1 Genbank gene 158 867 . + . ID=gene-C9F07_33085;Name=C9F07_33085;end_range=867,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33085;partial=true PYKI01003288.1 Protein Homology CDS 158 867 . + 0 ID=cds-TGD36107.1;Parent=gene-C9F07_33085;Dbxref=NCBI_GP:TGD36107.1;Name=TGD36107.1;end_range=867,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=C9F07_33085;partial=true;product=chorismate synthase;protein_id=TGD36107.1;transl_table=11 ##sequence-region PYKI01002126.1 1 3597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002126.1 Genbank region 1 3597 . + . ID=PYKI01002126.1:1..3597;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002126.1 Genbank gene 1 556 . - . ID=gene-C9F07_20570;Name=C9F07_20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20570;partial=true;start_range=.,1 PYKI01002126.1 Protein Homology CDS 1 556 . - 0 ID=cds-TGD58309.1;Parent=gene-C9F07_20570;Dbxref=NCBI_GP:TGD58309.1;Name=TGD58309.1;Note=unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ (but not ArcA)%2C induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic);gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=C9F07_20570;partial=true;product=oxidoreductase FeS-binding subunit;protein_id=TGD58309.1;start_range=.,1;transl_table=11 PYKI01002126.1 Genbank gene 742 2442 . + . ID=gene-C9F07_20575;Name=C9F07_20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20575 PYKI01002126.1 Protein Homology CDS 742 2442 . + 0 ID=cds-TGD58310.1;Parent=gene-C9F07_20575;Dbxref=NCBI_GP:TGD58310.1;Name=TGD58310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=C9F07_20575;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=TGD58310.1;transl_table=11 PYKI01002126.1 Genbank pseudogene 2627 3589 . + . ID=gene-C9F07_20580;Name=C9F07_20580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20580;pseudo=true PYKI01002126.1 Protein Homology CDS 2627 3589 . + 0 ID=cds-C9F07_20580;Parent=gene-C9F07_20580;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457015.1;locus_tag=C9F07_20580;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000111.1 1 6930 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000111.1 Genbank region 1 6930 . + . ID=PYKI01000111.1:1..6930;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000111.1 Genbank gene 1 92 . + . ID=gene-C9F07_00705;Name=C9F07_00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00705;partial=true;start_range=.,1 PYKI01000111.1 Protein Homology CDS 1 92 . + 2 ID=cds-TGE30115.1;Parent=gene-C9F07_00705;Dbxref=NCBI_GP:TGE30115.1;Name=TGE30115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102529.1;locus_tag=C9F07_00705;partial=true;product=Rha family transcriptional regulator;protein_id=TGE30115.1;start_range=.,1;transl_table=11 PYKI01000111.1 Genbank gene 125 634 . + . ID=gene-C9F07_00710;Name=C9F07_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00710 PYKI01000111.1 Protein Homology CDS 125 634 . + 0 ID=cds-TGE30116.1;Parent=gene-C9F07_00710;Dbxref=NCBI_GP:TGE30116.1;Name=TGE30116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461663.1;locus_tag=C9F07_00710;product=hypothetical protein;protein_id=TGE30116.1;transl_table=11 PYKI01000111.1 Genbank gene 642 875 . + . ID=gene-C9F07_00715;Name=C9F07_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00715 PYKI01000111.1 Protein Homology CDS 642 875 . + 0 ID=cds-TGE30117.1;Parent=gene-C9F07_00715;Dbxref=NCBI_GP:TGE30117.1;Name=TGE30117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461662.1;locus_tag=C9F07_00715;product=DUF2724 domain-containing protein;protein_id=TGE30117.1;transl_table=11 PYKI01000111.1 Genbank gene 823 1281 . - . ID=gene-C9F07_00720;Name=C9F07_00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00720 PYKI01000111.1 Protein Homology CDS 823 1281 . - 0 ID=cds-TGE30118.1;Parent=gene-C9F07_00720;Dbxref=NCBI_GP:TGE30118.1;Name=TGE30118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461661.1;locus_tag=C9F07_00720;product=hypothetical protein;protein_id=TGE30118.1;transl_table=11 PYKI01000111.1 Genbank gene 1501 1842 . + . ID=gene-C9F07_00725;Name=C9F07_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00725 PYKI01000111.1 Protein Homology CDS 1501 1842 . + 0 ID=cds-TGE30119.1;Parent=gene-C9F07_00725;Dbxref=NCBI_GP:TGE30119.1;Name=TGE30119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461660.1;locus_tag=C9F07_00725;product=hypothetical protein;protein_id=TGE30119.1;transl_table=11 PYKI01000111.1 Genbank gene 1910 2143 . + . ID=gene-C9F07_00730;Name=C9F07_00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00730 PYKI01000111.1 Protein Homology CDS 1910 2143 . + 0 ID=cds-TGE30120.1;Parent=gene-C9F07_00730;Dbxref=NCBI_GP:TGE30120.1;Name=TGE30120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461659.1;locus_tag=C9F07_00730;product=hypothetical protein;protein_id=TGE30120.1;transl_table=11 PYKI01000111.1 Genbank gene 2143 2370 . + . ID=gene-C9F07_00735;Name=C9F07_00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00735 PYKI01000111.1 Protein Homology CDS 2143 2370 . + 0 ID=cds-TGE30121.1;Parent=gene-C9F07_00735;Dbxref=NCBI_GP:TGE30121.1;Name=TGE30121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461658.1;locus_tag=C9F07_00735;product=hypothetical protein;protein_id=TGE30121.1;transl_table=11 PYKI01000111.1 Genbank gene 2367 3224 . + . ID=gene-C9F07_00740;Name=C9F07_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00740 PYKI01000111.1 Protein Homology CDS 2367 3224 . + 0 ID=cds-TGE30122.1;Parent=gene-C9F07_00740;Dbxref=NCBI_GP:TGE30122.1;Name=TGE30122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461657.1;locus_tag=C9F07_00740;product=DNA adenine methylase;protein_id=TGE30122.1;transl_table=11 PYKI01000111.1 Genbank gene 3215 5623 . + . ID=gene-C9F07_00745;Name=C9F07_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00745 PYKI01000111.1 Protein Homology CDS 3215 5623 . + 0 ID=cds-TGE30123.1;Parent=gene-C9F07_00745;Dbxref=NCBI_GP:TGE30123.1;Name=TGE30123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461656.1;locus_tag=C9F07_00745;product=replication endonuclease;protein_id=TGE30123.1;transl_table=11 PYKI01000111.1 Genbank gene 5777 5965 . + . ID=gene-C9F07_00750;Name=C9F07_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00750 PYKI01000111.1 Protein Homology CDS 5777 5965 . + 0 ID=cds-TGE30124.1;Parent=gene-C9F07_00750;Dbxref=NCBI_GP:TGE30124.1;Name=TGE30124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457860.1;locus_tag=C9F07_00750;product=hypothetical protein;protein_id=TGE30124.1;transl_table=11 PYKI01000111.1 Genbank gene 5904 6209 . + . ID=gene-C9F07_00755;Name=C9F07_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00755 PYKI01000111.1 Protein Homology CDS 5904 6209 . + 0 ID=cds-TGE30125.1;Parent=gene-C9F07_00755;Dbxref=NCBI_GP:TGE30125.1;Name=TGE30125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461654.1;locus_tag=C9F07_00755;product=DinI family protein;protein_id=TGE30125.1;transl_table=11 PYKI01000111.1 Genbank gene 6269 6930 . + . ID=gene-C9F07_00760;Name=C9F07_00760;end_range=6930,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00760;partial=true PYKI01000111.1 Protein Homology CDS 6269 6930 . + 0 ID=cds-TGE30126.1;Parent=gene-C9F07_00760;Dbxref=NCBI_GP:TGE30126.1;Name=TGE30126.1;end_range=6930,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461653.1;locus_tag=C9F07_00760;partial=true;product=hypothetical protein;protein_id=TGE30126.1;transl_table=11 ##sequence-region PYKI01001391.1 1 12527 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001391.1 Genbank region 1 12527 . + . ID=PYKI01001391.1:1..12527;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001391.1 Genbank gene 276 401 . - . ID=gene-C9F07_13105;Name=C9F07_13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13105 PYKI01001391.1 Protein Homology CDS 276 401 . - 0 ID=cds-TGD84216.1;Parent=gene-C9F07_13105;Dbxref=NCBI_GP:TGD84216.1;Name=TGD84216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456262.1;locus_tag=C9F07_13105;product=hypothetical protein;protein_id=TGD84216.1;transl_table=11 PYKI01001391.1 Genbank gene 779 1123 . + . ID=gene-C9F07_13110;Name=C9F07_13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13110 PYKI01001391.1 Protein Homology CDS 779 1123 . + 0 ID=cds-TGD84217.1;Parent=gene-C9F07_13110;Dbxref=NCBI_GP:TGD84217.1;Name=TGD84217.1;Note=PliC%3B periplasmic lysozyme inhibitor of c-type lysozyme;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=C9F07_13110;product=lysozyme inhibitor;protein_id=TGD84217.1;transl_table=11 PYKI01001391.1 Genbank gene 1878 1954 . - . ID=gene-C9F07_13115;Name=C9F07_13115;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_13115 PYKI01001391.1 tRNAscan-SE tRNA 1878 1954 . - . ID=rna-C9F07_13115;Parent=gene-C9F07_13115;anticodon=(pos:complement(1918..1920));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_13115;product=tRNA-Arg PYKI01001391.1 tRNAscan-SE exon 1878 1954 . - . ID=exon-C9F07_13115-1;Parent=rna-C9F07_13115;anticodon=(pos:complement(1918..1920));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_13115;product=tRNA-Arg PYKI01001391.1 Genbank gene 2360 2917 . - . ID=gene-C9F07_13120;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=C9F07_13120 PYKI01001391.1 Protein Homology CDS 2360 2917 . - 0 ID=cds-TGD84218.1;Parent=gene-C9F07_13120;Dbxref=NCBI_GP:TGD84218.1;Name=TGD84218.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=C9F07_13120;product=virulence membrane protein PagC;protein_id=TGD84218.1;transl_table=11 PYKI01001391.1 Genbank gene 2951 3148 . + . ID=gene-C9F07_13125;Name=C9F07_13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13125 PYKI01001391.1 Protein Homology CDS 2951 3148 . + 0 ID=cds-TGD84219.1;Parent=gene-C9F07_13125;Dbxref=NCBI_GP:TGD84219.1;Name=TGD84219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218891.1;locus_tag=C9F07_13125;product=hypothetical protein;protein_id=TGD84219.1;transl_table=11 PYKI01001391.1 Genbank gene 3484 3675 . - . ID=gene-C9F07_13130;Name=C9F07_13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13130 PYKI01001391.1 Protein Homology CDS 3484 3675 . - 0 ID=cds-TGD84220.1;Parent=gene-C9F07_13130;Dbxref=NCBI_GP:TGD84220.1;Name=TGD84220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529092.1;locus_tag=C9F07_13130;product=hypothetical protein;protein_id=TGD84220.1;transl_table=11 PYKI01001391.1 Genbank gene 3724 3987 . + . ID=gene-C9F07_13135;Name=C9F07_13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13135 PYKI01001391.1 Protein Homology CDS 3724 3987 . + 0 ID=cds-TGD84221.1;Parent=gene-C9F07_13135;Dbxref=NCBI_GP:TGD84221.1;Name=TGD84221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456271.1;locus_tag=C9F07_13135;product=virulence factor;protein_id=TGD84221.1;transl_table=11 PYKI01001391.1 Genbank gene 4119 4331 . + . ID=gene-C9F07_13140;Name=C9F07_13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13140 PYKI01001391.1 Protein Homology CDS 4119 4331 . + 0 ID=cds-TGD84222.1;Parent=gene-C9F07_13140;Dbxref=NCBI_GP:TGD84222.1;Name=TGD84222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456272.1;locus_tag=C9F07_13140;product=cold-shock protein;protein_id=TGD84222.1;transl_table=11 PYKI01001391.1 Genbank gene 4748 5269 . + . ID=gene-C9F07_13145;Name=C9F07_13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13145 PYKI01001391.1 Protein Homology CDS 4748 5269 . + 0 ID=cds-TGD84223.1;Parent=gene-C9F07_13145;Dbxref=NCBI_GP:TGD84223.1;Name=TGD84223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456273.1;locus_tag=C9F07_13145;product=lipoprotein EnvE;protein_id=TGD84223.1;transl_table=11 PYKI01001391.1 Genbank gene 5460 5699 . + . ID=gene-C9F07_13150;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=C9F07_13150 PYKI01001391.1 Protein Homology CDS 5460 5699 . + 0 ID=cds-TGD84224.1;Parent=gene-C9F07_13150;Dbxref=NCBI_GP:TGD84224.1;Name=TGD84224.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456274.1;locus_tag=C9F07_13150;product=virulence protein MsgA;protein_id=TGD84224.1;transl_table=11 PYKI01001391.1 Genbank gene 6579 7388 . + . ID=gene-C9F07_13155;Name=C9F07_13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13155 PYKI01001391.1 Protein Homology CDS 6579 7388 . + 0 ID=cds-TGD84230.1;Parent=gene-C9F07_13155;Dbxref=NCBI_GP:TGD84230.1;Name=TGD84230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456275.1;locus_tag=C9F07_13155;product=cytolethal distending toxin subunit B family protein;protein_id=TGD84230.1;transl_table=11 PYKI01001391.1 Genbank gene 7461 7838 . + . ID=gene-C9F07_13160;Name=C9F07_13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13160 PYKI01001391.1 Protein Homology CDS 7461 7838 . + 0 ID=cds-TGD84225.1;Parent=gene-C9F07_13160;Dbxref=NCBI_GP:TGD84225.1;Name=TGD84225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277616.1;locus_tag=C9F07_13160;product=DUF1353 domain-containing protein;protein_id=TGD84225.1;transl_table=11 PYKI01001391.1 Genbank gene 7986 8528 . - . ID=gene-C9F07_13165;Name=C9F07_13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13165 PYKI01001391.1 Protein Homology CDS 7986 8528 . - 0 ID=cds-TGD84226.1;Parent=gene-C9F07_13165;Dbxref=NCBI_GP:TGD84226.1;Name=TGD84226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456277.1;locus_tag=C9F07_13165;product=hypothetical protein;protein_id=TGD84226.1;transl_table=11 PYKI01001391.1 Genbank gene 8712 9440 . - . ID=gene-C9F07_13170;Name=C9F07_13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13170 PYKI01001391.1 Protein Homology CDS 8712 9440 . - 0 ID=cds-TGD84227.1;Parent=gene-C9F07_13170;Dbxref=NCBI_GP:TGD84227.1;Name=TGD84227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233073.1;locus_tag=C9F07_13170;product=pertussis toxin-like subunit ArtA;protein_id=TGD84227.1;transl_table=11 PYKI01001391.1 Genbank gene 9457 9870 . - . ID=gene-C9F07_13175;Name=C9F07_13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13175 PYKI01001391.1 Protein Homology CDS 9457 9870 . - 0 ID=cds-TGD84228.1;Parent=gene-C9F07_13175;Dbxref=NCBI_GP:TGD84228.1;Name=TGD84228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456279.1;locus_tag=C9F07_13175;product=subtilase cytotoxin subunit B;protein_id=TGD84228.1;transl_table=11 PYKI01001391.1 Genbank gene 10913 12037 . - . ID=gene-C9F07_13180;Name=C9F07_13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13180 PYKI01001391.1 Protein Homology CDS 10913 12037 . - 0 ID=cds-TGD84229.1;Parent=gene-C9F07_13180;Dbxref=NCBI_GP:TGD84229.1;Name=TGD84229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=C9F07_13180;product=DUF3626 domain-containing protein;protein_id=TGD84229.1;transl_table=11 ##sequence-region PYKI01000521.1 1 865 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000521.1 Genbank region 1 865 . + . ID=PYKI01000521.1:1..865;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000521.1 Genbank pseudogene 1 865 . - . ID=gene-C9F07_04320;Name=C9F07_04320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04320;pseudo=true PYKI01000521.1 Protein Homology CDS 1 865 . - 1 ID=cds-C9F07_04320;Parent=gene-C9F07_04320;Note=frameshifted%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457158.1;locus_tag=C9F07_04320;product=large repetitive protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002181.1 1 865 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002181.1 Genbank region 1 865 . + . ID=PYKI01002181.1:1..865;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002181.1 Genbank pseudogene 1 428 . - . ID=gene-C9F07_21195;Name=C9F07_21195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21195;pseudo=true PYKI01002181.1 Protein Homology CDS 1 428 . - 0 ID=cds-C9F07_21195;Parent=gene-C9F07_21195;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457152.1;locus_tag=C9F07_21195;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002181.1 Genbank gene 360 554 . + . ID=gene-C9F07_21200;Name=C9F07_21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21200 PYKI01002181.1 Protein Homology CDS 360 554 . + 0 ID=cds-TGD56822.1;Parent=gene-C9F07_21200;Dbxref=NCBI_GP:TGD56822.1;Name=TGD56822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449071.1;locus_tag=C9F07_21200;product=molecular chaperone GrpE;protein_id=TGD56822.1;transl_table=11 PYKI01002181.1 Genbank gene 551 865 . + . ID=gene-C9F07_21205;Name=grpE;end_range=865,.;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=C9F07_21205;partial=true PYKI01002181.1 Protein Homology CDS 551 865 . + 0 ID=cds-TGD56823.1;Parent=gene-C9F07_21205;Dbxref=NCBI_GP:TGD56823.1;Name=TGD56823.1;end_range=865,.;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457151.1;locus_tag=C9F07_21205;partial=true;product=nucleotide exchange factor GrpE;protein_id=TGD56823.1;transl_table=11 ##sequence-region PYKI01002809.1 1 865 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002809.1 Genbank region 1 865 . + . ID=PYKI01002809.1:1..865;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002809.1 Genbank pseudogene 61 865 . + . ID=gene-C9F07_28150;Name=C9F07_28150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28150;pseudo=true PYKI01002809.1 Protein Homology CDS 61 865 . + 0 ID=cds-C9F07_28150;Parent=gene-C9F07_28150;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455362.1;locus_tag=C9F07_28150;product=mechanosensitive channel protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002966.1 1 864 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002966.1 Genbank region 1 864 . + . ID=PYKI01002966.1:1..864;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002966.1 Genbank gene 1 601 . - . ID=gene-C9F07_29730;Name=C9F07_29730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29730;partial=true;start_range=.,1 PYKI01002966.1 Protein Homology CDS 1 601 . - 0 ID=cds-TGD41786.1;Parent=gene-C9F07_29730;Dbxref=NCBI_GP:TGD41786.1;Name=TGD41786.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455709.1;locus_tag=C9F07_29730;partial=true;product=lipoprotein-releasing system transmembrane subunit LolC;protein_id=TGD41786.1;start_range=.,1;transl_table=11 PYKI01002966.1 Genbank gene 664 864 . - . ID=gene-C9F07_29735;Name=C9F07_29735;end_range=864,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29735;partial=true PYKI01002966.1 Protein Homology CDS 664 864 . - 0 ID=cds-TGD41785.1;Parent=gene-C9F07_29735;Dbxref=NCBI_GP:TGD41785.1;Name=TGD41785.1;end_range=864,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534798.1;locus_tag=C9F07_29735;partial=true;product=hypothetical protein;protein_id=TGD41785.1;transl_table=11 ##sequence-region PYKI01003369.1 1 864 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003369.1 Genbank region 1 864 . + . ID=PYKI01003369.1:1..864;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003369.1 Genbank gene 1 263 . + . ID=gene-C9F07_33945;Name=C9F07_33945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33945;partial=true;start_range=.,1 PYKI01003369.1 Protein Homology CDS 1 263 . + 2 ID=cds-TGD34699.1;Parent=gene-C9F07_33945;Dbxref=NCBI_GP:TGD34699.1;Name=TGD34699.1;Note=TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs%3B forms 2-thiocytidine (s(2)C);gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=C9F07_33945;partial=true;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=TGD34699.1;start_range=.,1;transl_table=11 PYKI01003369.1 Genbank pseudogene 307 819 . - . ID=gene-C9F07_33950;Name=C9F07_33950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33950;pseudo=true PYKI01003369.1 Protein Homology CDS 307 819 . - 0 ID=cds-C9F07_33950;Parent=gene-C9F07_33950;Note=exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=C9F07_33950;product=ATP-dependent RNA helicase DbpA;pseudo=true;transl_table=11 ##sequence-region PYKI01003319.1 1 863 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003319.1 Genbank region 1 863 . + . ID=PYKI01003319.1:1..863;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003319.1 Genbank gene 1 386 . - . ID=gene-C9F07_33385;Name=C9F07_33385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33385;partial=true;start_range=.,1 PYKI01003319.1 Protein Homology CDS 1 386 . - 0 ID=cds-TGD35953.1;Parent=gene-C9F07_33385;Dbxref=NCBI_GP:TGD35953.1;Name=TGD35953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457376.1;locus_tag=C9F07_33385;partial=true;product=hypothetical protein;protein_id=TGD35953.1;start_range=.,1;transl_table=11 PYKI01003319.1 Genbank gene 405 863 . - . ID=gene-C9F07_33390;Name=C9F07_33390;end_range=863,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33390;partial=true PYKI01003319.1 Protein Homology CDS 405 863 . - 0 ID=cds-TGD35954.1;Parent=gene-C9F07_33390;Dbxref=NCBI_GP:TGD35954.1;Name=TGD35954.1;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;end_range=863,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=C9F07_33390;partial=true;product=transcriptional regulator;protein_id=TGD35954.1;transl_table=11 ##sequence-region PYKI01002991.1 1 863 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002991.1 Genbank region 1 863 . + . ID=PYKI01002991.1:1..863;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002991.1 Genbank gene 1 237 . - . ID=gene-C9F07_30015;Name=C9F07_30015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30015;partial=true;start_range=.,1 PYKI01002991.1 Protein Homology CDS 1 237 . - 0 ID=cds-TGD41342.1;Parent=gene-C9F07_30015;Dbxref=NCBI_GP:TGD41342.1;Name=TGD41342.1;Note=represses the modABCD operon and activates the moaABCD and napFDAGHBC operons;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455321.1;locus_tag=C9F07_30015;partial=true;product=molybdenum-dependent transcriptional regulator;protein_id=TGD41342.1;start_range=.,1;transl_table=11 PYKI01002991.1 Genbank pseudogene 366 509 . + . ID=gene-C9F07_30020;Name=C9F07_30020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30020;pseudo=true PYKI01002991.1 Protein Homology CDS 366 509 . + 0 ID=cds-C9F07_30020;Parent=gene-C9F07_30020;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308817.1;locus_tag=C9F07_30020;product=multidrug efflux pump-associated protein%2C AcrZ family;pseudo=true;transl_table=11 PYKI01002991.1 Genbank gene 682 863 . + . ID=gene-C9F07_30025;Name=modA;end_range=863,.;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=C9F07_30025;partial=true PYKI01002991.1 Protein Homology CDS 682 863 . + 0 ID=cds-TGD41343.1;Parent=gene-C9F07_30025;Dbxref=NCBI_GP:TGD41343.1;Name=TGD41343.1;Note=with ModCB is involved in the high-affinity transport of molybdate;end_range=863,.;gbkey=CDS;gene=modA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455323.1;locus_tag=C9F07_30025;partial=true;product=molybdate ABC transporter substrate-binding protein;protein_id=TGD41343.1;transl_table=11 ##sequence-region PYKI01001860.1 1 862 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001860.1 Genbank region 1 862 . + . ID=PYKI01001860.1:1..862;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001860.1 Genbank gene 1 728 . - . ID=gene-C9F07_17890;Name=C9F07_17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17890;partial=true;start_range=.,1 PYKI01001860.1 Protein Homology CDS 1 728 . - 0 ID=cds-TGD63022.1;Parent=gene-C9F07_17890;Dbxref=NCBI_GP:TGD63022.1;Name=TGD63022.1;Note=required for the translocation of capsular polysaccharide through the outer membrane;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=C9F07_17890;partial=true;product=polysaccharide export protein Wza;protein_id=TGD63022.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000868.1 1 861 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000868.1 Genbank region 1 861 . + . ID=PYKI01000868.1:1..861;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000868.1 Genbank gene 1 363 . + . ID=gene-C9F07_07975;Name=C9F07_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07975;partial=true;start_range=.,1 PYKI01000868.1 Protein Homology CDS 1 363 . + 0 ID=cds-TGE05178.1;Parent=gene-C9F07_07975;Dbxref=NCBI_GP:TGE05178.1;Name=TGE05178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455347.1;locus_tag=C9F07_07975;partial=true;product=molybdopterin synthase catalytic subunit MoaE;protein_id=TGE05178.1;start_range=.,1;transl_table=11 PYKI01000868.1 Genbank gene 411 861 . + . ID=gene-C9F07_07980;Name=C9F07_07980;end_range=861,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07980;partial=true PYKI01000868.1 Protein Homology CDS 411 861 . + 0 ID=cds-TGE05179.1;Parent=gene-C9F07_07980;Dbxref=NCBI_GP:TGE05179.1;Name=TGE05179.1;end_range=861,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000373608.1;locus_tag=C9F07_07980;partial=true;product=hypothetical protein;protein_id=TGE05179.1;transl_table=11 ##sequence-region PYKI01002570.1 1 3586 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002570.1 Genbank region 1 3586 . + . ID=PYKI01002570.1:1..3586;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002570.1 Genbank gene 1 191 . + . ID=gene-C9F07_25500;Name=C9F07_25500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25500;partial=true;start_range=.,1 PYKI01002570.1 Protein Homology CDS 1 191 . + 2 ID=cds-TGD49796.1;Parent=gene-C9F07_25500;Dbxref=NCBI_GP:TGD49796.1;Name=TGD49796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457539.1;locus_tag=C9F07_25500;partial=true;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=TGD49796.1;start_range=.,1;transl_table=11 PYKI01002570.1 Genbank gene 219 467 . + . ID=gene-C9F07_25505;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=C9F07_25505 PYKI01002570.1 Protein Homology CDS 219 467 . + 0 ID=cds-TGD49797.1;Parent=gene-C9F07_25505;Dbxref=NCBI_GP:TGD49797.1;Name=TGD49797.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457538.1;locus_tag=C9F07_25505;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=TGD49797.1;transl_table=11 PYKI01002570.1 Genbank gene 543 1595 . + . ID=gene-C9F07_25510;Name=C9F07_25510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25510 PYKI01002570.1 Protein Homology CDS 543 1595 . + 0 ID=cds-TGD49798.1;Parent=gene-C9F07_25510;Dbxref=NCBI_GP:TGD49798.1;Name=TGD49798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=C9F07_25510;product=hypothetical protein;protein_id=TGD49798.1;transl_table=11 PYKI01002570.1 Genbank gene 1595 2305 . + . ID=gene-C9F07_25515;Name=C9F07_25515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25515 PYKI01002570.1 Protein Homology CDS 1595 2305 . + 0 ID=cds-TGD49799.1;Parent=gene-C9F07_25515;Dbxref=NCBI_GP:TGD49799.1;Name=TGD49799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=C9F07_25515;product=molybdenum ABC transporter substrate-binding protein;protein_id=TGD49799.1;transl_table=11 PYKI01002570.1 Genbank gene 2373 3239 . - . ID=gene-C9F07_25520;Name=C9F07_25520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25520 PYKI01002570.1 Protein Homology CDS 2373 3239 . - 0 ID=cds-TGD49800.1;Parent=gene-C9F07_25520;Dbxref=NCBI_GP:TGD49800.1;Name=TGD49800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=C9F07_25520;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=TGD49800.1;transl_table=11 PYKI01002570.1 Genbank pseudogene 3466 3552 . + . ID=gene-C9F07_25525;Name=C9F07_25525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25525;pseudo=true PYKI01002570.1 Protein Homology CDS 3466 3552 . + 0 ID=cds-C9F07_25525;Parent=gene-C9F07_25525;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311900.1;locus_tag=C9F07_25525;product=CHAP domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000501.1 1 861 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000501.1 Genbank region 1 861 . + . ID=PYKI01000501.1:1..861;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000501.1 Genbank gene 1 312 . + . ID=gene-C9F07_04070;Name=C9F07_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04070;partial=true;start_range=.,1 PYKI01000501.1 Protein Homology CDS 1 312 . + 0 ID=cds-TGE17323.1;Parent=gene-C9F07_04070;Dbxref=NCBI_GP:TGE17323.1;Name=TGE17323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457311.1;locus_tag=C9F07_04070;partial=true;product=hypothetical protein;protein_id=TGE17323.1;start_range=.,1;transl_table=11 PYKI01000501.1 Genbank gene 323 559 . + . ID=gene-C9F07_04075;Name=C9F07_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04075 PYKI01000501.1 Protein Homology CDS 323 559 . + 0 ID=cds-TGE17324.1;Parent=gene-C9F07_04075;Dbxref=NCBI_GP:TGE17324.1;Name=TGE17324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457312.1;locus_tag=C9F07_04075;product=hypothetical protein;protein_id=TGE17324.1;transl_table=11 PYKI01000501.1 Genbank gene 604 861 . - . ID=gene-C9F07_04080;Name=C9F07_04080;end_range=861,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04080;partial=true PYKI01000501.1 Protein Homology CDS 604 861 . - 0 ID=cds-TGE17325.1;Parent=gene-C9F07_04080;Dbxref=NCBI_GP:TGE17325.1;Name=TGE17325.1;end_range=861,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=C9F07_04080;partial=true;product=hypothetical protein;protein_id=TGE17325.1;transl_table=11 ##sequence-region PYKI01001312.1 1 861 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001312.1 Genbank region 1 861 . + . ID=PYKI01001312.1:1..861;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001312.1 Genbank gene 105 861 . + . ID=gene-C9F07_12275;Name=C9F07_12275;end_range=861,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12275;partial=true PYKI01001312.1 Protein Homology CDS 105 861 . + 0 ID=cds-TGD86624.1;Parent=gene-C9F07_12275;Dbxref=NCBI_GP:TGD86624.1;Name=TGD86624.1;end_range=861,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457749.1;locus_tag=C9F07_12275;partial=true;product=rod shape-determining protein MreC;protein_id=TGD86624.1;transl_table=11 ##sequence-region PYKI01000478.1 1 860 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000478.1 Genbank region 1 860 . + . ID=PYKI01000478.1:1..860;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000478.1 Genbank gene 1 860 . + . ID=gene-C9F07_03830;Name=C9F07_03830;end_range=860,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03830;partial=true;start_range=.,1 PYKI01000478.1 Protein Homology CDS 1 860 . + 0 ID=cds-TGE19009.1;Parent=gene-C9F07_03830;Dbxref=NCBI_GP:TGE19009.1;Name=TGE19009.1;end_range=860,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=C9F07_03830;partial=true;product=alpha-2-macroglobulin;protein_id=TGE19009.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003453.1 1 859 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003453.1 Genbank region 1 859 . + . ID=PYKI01003453.1:1..859;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003453.1 Genbank gene 1 859 . - . ID=gene-C9F07_34730;Name=C9F07_34730;end_range=859,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34730;partial=true;start_range=.,1 PYKI01003453.1 Protein Homology CDS 1 859 . - 2 ID=cds-TGD33383.1;Parent=gene-C9F07_34730;Dbxref=NCBI_GP:TGD33383.1;Name=TGD33383.1;end_range=859,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455030.1;locus_tag=C9F07_34730;partial=true;product=MFS transporter;protein_id=TGD33383.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000717.1 1 859 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000717.1 Genbank region 1 859 . + . ID=PYKI01000717.1:1..859;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000717.1 Genbank gene 1 859 . + . ID=gene-C9F07_06285;Name=C9F07_06285;end_range=859,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06285;partial=true;start_range=.,1 PYKI01000717.1 Protein Homology CDS 1 859 . + 2 ID=cds-TGE11285.1;Parent=gene-C9F07_06285;Dbxref=NCBI_GP:TGE11285.1;Name=TGE11285.1;end_range=859,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457806.1;locus_tag=C9F07_06285;partial=true;product=hypothetical protein;protein_id=TGE11285.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002510.1 1 858 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002510.1 Genbank region 1 858 . + . ID=PYKI01002510.1:1..858;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002510.1 Genbank gene 1 858 . + . ID=gene-C9F07_24880;Name=C9F07_24880;end_range=858,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24880;partial=true;start_range=.,1 PYKI01002510.1 Protein Homology CDS 1 858 . + 1 ID=cds-TGD50189.1;Parent=gene-C9F07_24880;Dbxref=NCBI_GP:TGD50189.1;Name=TGD50189.1;end_range=858,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000763887.1;locus_tag=C9F07_24880;partial=true;product=helicase;protein_id=TGD50189.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003360.1 1 858 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003360.1 Genbank region 1 858 . + . ID=PYKI01003360.1:1..858;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003360.1 Genbank gene 4 564 . + . ID=gene-C9F07_33840;Name=C9F07_33840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33840 PYKI01003360.1 Protein Homology CDS 4 564 . + 0 ID=cds-TGD34732.1;Parent=gene-C9F07_33840;Dbxref=NCBI_GP:TGD34732.1;Name=TGD34732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308515.2;locus_tag=C9F07_33840;product=hypothetical protein;protein_id=TGD34732.1;transl_table=11 PYKI01003360.1 Genbank pseudogene 608 835 . + . ID=gene-C9F07_33845;Name=C9F07_33845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33845;pseudo=true PYKI01003360.1 Protein Homology CDS 608 835 . + 0 ID=cds-C9F07_33845;Parent=gene-C9F07_33845;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308514.1;locus_tag=C9F07_33845;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002562.1 1 857 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002562.1 Genbank region 1 857 . + . ID=PYKI01002562.1:1..857;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002562.1 Genbank pseudogene 1 836 . + . ID=gene-C9F07_25440;Name=C9F07_25440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25440;pseudo=true PYKI01002562.1 Protein Homology CDS 1 836 . + 2 ID=cds-C9F07_25440;Parent=gene-C9F07_25440;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457592.1;locus_tag=C9F07_25440;product=bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01002821.1 1 856 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002821.1 Genbank region 1 856 . + . ID=PYKI01002821.1:1..856;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002821.1 Genbank gene 395 856 . + . ID=gene-C9F07_28225;Name=C9F07_28225;end_range=856,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28225;partial=true PYKI01002821.1 Protein Homology CDS 395 856 . + 0 ID=cds-TGD45655.1;Parent=gene-C9F07_28225;Dbxref=NCBI_GP:TGD45655.1;Name=TGD45655.1;end_range=856,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=C9F07_28225;partial=true;product=DNA polymerase I;protein_id=TGD45655.1;transl_table=11 ##sequence-region PYKI01000290.1 1 856 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000290.1 Genbank region 1 856 . + . ID=PYKI01000290.1:1..856;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000290.1 Genbank gene 1 856 . - . ID=gene-C9F07_01890;Name=C9F07_01890;end_range=856,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01890;partial=true;start_range=.,1 PYKI01000290.1 Protein Homology CDS 1 856 . - 0 ID=cds-TGE27817.1;Parent=gene-C9F07_01890;Dbxref=NCBI_GP:TGE27817.1;Name=TGE27817.1;end_range=856,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=C9F07_01890;partial=true;product=hypothetical protein;protein_id=TGE27817.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001730.1 1 3576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001730.1 Genbank region 1 3576 . + . ID=PYKI01001730.1:1..3576;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001730.1 Genbank gene 1 303 . - . ID=gene-C9F07_16520;Name=C9F07_16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16520;partial=true;start_range=.,1 PYKI01001730.1 Protein Homology CDS 1 303 . - 0 ID=cds-TGD68689.1;Parent=gene-C9F07_16520;Dbxref=NCBI_GP:TGD68689.1;Name=TGD68689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=C9F07_16520;partial=true;product=cupin domain-containing protein;protein_id=TGD68689.1;start_range=.,1;transl_table=11 PYKI01001730.1 Genbank gene 317 1909 . - . ID=gene-C9F07_16525;Name=C9F07_16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16525 PYKI01001730.1 Protein Homology CDS 317 1909 . - 0 ID=cds-TGD68690.1;Parent=gene-C9F07_16525;Dbxref=NCBI_GP:TGD68690.1;Name=TGD68690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=C9F07_16525;product=autoinducer-2 kinase;protein_id=TGD68690.1;transl_table=11 PYKI01001730.1 Genbank gene 1996 2955 . - . ID=gene-C9F07_16530;Name=C9F07_16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16530 PYKI01001730.1 Protein Homology CDS 1996 2955 . - 0 ID=cds-TGD68691.1;Parent=gene-C9F07_16530;Dbxref=NCBI_GP:TGD68691.1;Name=TGD68691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457979.1;locus_tag=C9F07_16530;product=transcriptional regulator LsrR;protein_id=TGD68691.1;transl_table=11 PYKI01001730.1 Genbank gene 3211 3576 . + . ID=gene-C9F07_16535;Name=C9F07_16535;end_range=3576,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16535;partial=true PYKI01001730.1 Protein Homology CDS 3211 3576 . + 0 ID=cds-TGD68692.1;Parent=gene-C9F07_16535;Dbxref=NCBI_GP:TGD68692.1;Name=TGD68692.1;end_range=3576,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457978.1;locus_tag=C9F07_16535;partial=true;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=TGD68692.1;transl_table=11 ##sequence-region PYKI01000902.1 1 856 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000902.1 Genbank region 1 856 . + . ID=PYKI01000902.1:1..856;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000902.1 Genbank gene 1 856 . + . ID=gene-C9F07_08245;Name=citN;end_range=856,.;gbkey=Gene;gene=citN;gene_biotype=protein_coding;locus_tag=C9F07_08245;partial=true;start_range=.,1 PYKI01000902.1 Protein Homology CDS 1 856 . + 1 ID=cds-TGE03206.1;Parent=gene-C9F07_08245;Dbxref=NCBI_GP:TGE03206.1;Name=TGE03206.1;end_range=856,.;gbkey=CDS;gene=citN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454668.1;locus_tag=C9F07_08245;partial=true;product=citrate/sodium symporter CitN;protein_id=TGE03206.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000497.1 1 855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000497.1 Genbank region 1 855 . + . ID=PYKI01000497.1:1..855;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000497.1 Genbank gene 1 403 . - . ID=gene-C9F07_04025;Name=C9F07_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04025;partial=true;start_range=.,1 PYKI01000497.1 Protein Homology CDS 1 403 . - 0 ID=cds-TGE17518.1;Parent=gene-C9F07_04025;Dbxref=NCBI_GP:TGE17518.1;Name=TGE17518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455100.1;locus_tag=C9F07_04025;partial=true;product=short-chain dehydrogenase;protein_id=TGE17518.1;start_range=.,1;transl_table=11 PYKI01000497.1 Genbank pseudogene 558 824 . - . ID=gene-C9F07_04030;Name=C9F07_04030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04030;pseudo=true PYKI01000497.1 Protein Homology CDS 558 824 . - 0 ID=cds-C9F07_04030;Parent=gene-C9F07_04030;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001331375.1;locus_tag=C9F07_04030;product=arylesterase;pseudo=true;transl_table=11 ##sequence-region PYKI01002250.1 1 855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002250.1 Genbank region 1 855 . + . ID=PYKI01002250.1:1..855;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002250.1 Genbank pseudogene 1 817 . - . ID=gene-C9F07_21995;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=pseudogene;locus_tag=C9F07_21995;pseudo=true PYKI01002250.1 Protein Homology CDS 1 817 . - 0 ID=cds-C9F07_21995;Parent=gene-C9F07_21995;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=prfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463416.1;locus_tag=C9F07_21995;product=peptide chain release factor 3;pseudo=true;transl_table=11 ##sequence-region PYKI01001935.1 1 855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001935.1 Genbank region 1 855 . + . ID=PYKI01001935.1:1..855;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001935.1 Genbank gene 1 855 . + . ID=gene-C9F07_18670;Name=C9F07_18670;end_range=855,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18670;partial=true;start_range=.,1 PYKI01001935.1 Protein Homology CDS 1 855 . + 1 ID=cds-TGD60748.1;Parent=gene-C9F07_18670;Dbxref=NCBI_GP:TGD60748.1;Name=TGD60748.1;end_range=855,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458441.1;locus_tag=C9F07_18670;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGD60748.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002571.1 1 855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002571.1 Genbank region 1 855 . + . ID=PYKI01002571.1:1..855;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002571.1 Genbank gene 1 168 . - . ID=gene-C9F07_25530;Name=C9F07_25530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25530;partial=true;start_range=.,1 PYKI01002571.1 Protein Homology CDS 1 168 . - 0 ID=cds-TGD49790.1;Parent=gene-C9F07_25530;Dbxref=NCBI_GP:TGD49790.1;Name=TGD49790.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=C9F07_25530;partial=true;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=TGD49790.1;start_range=.,1;transl_table=11 PYKI01002571.1 Genbank gene 233 855 . - . ID=gene-C9F07_25535;Name=C9F07_25535;end_range=855,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25535;partial=true PYKI01002571.1 Protein Homology CDS 233 855 . - 2 ID=cds-TGD49791.1;Parent=gene-C9F07_25535;Dbxref=NCBI_GP:TGD49791.1;Name=TGD49791.1;end_range=855,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=C9F07_25535;partial=true;product=L-lactate dehydrogenase;protein_id=TGD49791.1;transl_table=11 ##sequence-region PYKI01000600.1 1 854 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000600.1 Genbank region 1 854 . + . ID=PYKI01000600.1:1..854;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000600.1 Genbank gene 199 854 . - . ID=gene-C9F07_05130;Name=C9F07_05130;end_range=854,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05130;partial=true PYKI01000600.1 Protein Homology CDS 199 854 . - 2 ID=cds-TGE14059.1;Parent=gene-C9F07_05130;Dbxref=NCBI_GP:TGE14059.1;Name=TGE14059.1;end_range=854,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132042.1;locus_tag=C9F07_05130;partial=true;product=DNA-binding transcriptional regulator KdgR;protein_id=TGE14059.1;transl_table=11 ##sequence-region PYKI01001892.1 1 853 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001892.1 Genbank region 1 853 . + . ID=PYKI01001892.1:1..853;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001892.1 Genbank gene 1 853 . + . ID=gene-C9F07_18260;Name=C9F07_18260;end_range=853,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18260;partial=true;start_range=.,1 PYKI01001892.1 Protein Homology CDS 1 853 . + 1 ID=cds-TGD61775.1;Parent=gene-C9F07_18260;Dbxref=NCBI_GP:TGD61775.1;Name=TGD61775.1;Note=DNA-binding membrane protein required for chromosome resolution and partitioning;end_range=853,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455448.1;locus_tag=C9F07_18260;partial=true;product=DNA translocase FtsK;protein_id=TGD61775.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003179.1 1 853 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003179.1 Genbank region 1 853 . + . ID=PYKI01003179.1:1..853;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003179.1 Genbank gene 1 565 . + . ID=gene-C9F07_31895;Name=C9F07_31895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31895;partial=true;start_range=.,1 PYKI01003179.1 Protein Homology CDS 1 565 . + 1 ID=cds-TGD37673.1;Parent=gene-C9F07_31895;Dbxref=NCBI_GP:TGD37673.1;Name=TGD37673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=C9F07_31895;partial=true;product=aromatic amino acid transaminase;protein_id=TGD37673.1;start_range=.,1;transl_table=11 PYKI01003179.1 Genbank gene 475 705 . - . ID=gene-C9F07_31900;Name=C9F07_31900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31900 PYKI01003179.1 Protein Homology CDS 475 705 . - 0 ID=cds-TGD37674.1;Parent=gene-C9F07_31900;Dbxref=NCBI_GP:TGD37674.1;Name=TGD37674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001414450.1;locus_tag=C9F07_31900;product=hypothetical protein;protein_id=TGD37674.1;transl_table=11 PYKI01003179.1 Genbank gene 752 853 . + . ID=gene-C9F07_31905;Name=aphA;end_range=853,.;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=C9F07_31905;partial=true PYKI01003179.1 Protein Homology CDS 752 853 . + 0 ID=cds-TGD37675.1;Parent=gene-C9F07_31905;Dbxref=NCBI_GP:TGD37675.1;Name=TGD37675.1;Note=Class B%3B non-specific%3B catalyzes the dephosphorylation of organic phosphomonoesters%3B also has phosphotransferase activity;end_range=853,.;gbkey=CDS;gene=aphA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458547.1;locus_tag=C9F07_31905;partial=true;product=acid phosphatase AphA;protein_id=TGD37675.1;transl_table=11 ##sequence-region PYKI01002776.1 1 852 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002776.1 Genbank region 1 852 . + . ID=PYKI01002776.1:1..852;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002776.1 Genbank gene 1 191 . + . ID=gene-C9F07_27735;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=C9F07_27735;partial=true;start_range=.,1 PYKI01002776.1 Protein Homology CDS 1 191 . + 2 ID=cds-TGD46331.1;Parent=gene-C9F07_27735;Dbxref=NCBI_GP:TGD46331.1;Name=TGD46331.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;gene=lamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458529.1;locus_tag=C9F07_27735;partial=true;product=maltoporin;protein_id=TGD46331.1;start_range=.,1;transl_table=11 PYKI01002776.1 Genbank pseudogene 355 780 . + . ID=gene-C9F07_27740;Name=C9F07_27740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27740;pseudo=true PYKI01002776.1 Protein Homology CDS 355 780 . + 0 ID=cds-C9F07_27740;Parent=gene-C9F07_27740;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458530.1;locus_tag=C9F07_27740;product=maltose operon protein MalM;pseudo=true;transl_table=11 ##sequence-region PYKI01001916.1 1 3560 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001916.1 Genbank region 1 3560 . + . ID=PYKI01001916.1:1..3560;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001916.1 Genbank pseudogene 55 834 . - . ID=gene-C9F07_18440;Name=C9F07_18440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18440;pseudo=true PYKI01001916.1 Protein Homology CDS 55 834 . - 0 ID=cds-C9F07_18440;Parent=gene-C9F07_18440;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=C9F07_18440;product=formate dehydrogenase accessory protein FdhE;pseudo=true;transl_table=11 PYKI01001916.1 Genbank gene 831 1466 . - . ID=gene-C9F07_18445;Name=C9F07_18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18445 PYKI01001916.1 Protein Homology CDS 831 1466 . - 0 ID=cds-TGD61137.1;Parent=gene-C9F07_18445;Dbxref=NCBI_GP:TGD61137.1;Name=TGD61137.1;Note=cytochrome b556(FDO) component%3B heme containing;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458015.1;locus_tag=C9F07_18445;product=formate dehydrogenase cytochrome b556 subunit;protein_id=TGD61137.1;transl_table=11 PYKI01001916.1 Genbank gene 1463 2365 . - . ID=gene-C9F07_18450;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=C9F07_18450 PYKI01001916.1 Protein Homology CDS 1463 2365 . - 0 ID=cds-TGD61138.1;Parent=gene-C9F07_18450;Dbxref=NCBI_GP:TGD61138.1;Name=TGD61138.1;gbkey=CDS;gene=fdxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=C9F07_18450;product=formate dehydrogenase subunit beta;protein_id=TGD61138.1;transl_table=11 PYKI01001916.1 Genbank gene 2378 3560 . - . ID=gene-C9F07_18455;Name=C9F07_18455;end_range=3560,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18455;partial=true PYKI01001916.1 Protein Homology CDS 2378 3560 . - 1 ID=cds-TGD61139.1;Parent=gene-C9F07_18455;Dbxref=NCBI_GP:TGD61139.1;Name=TGD61139.1;end_range=3560,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458013.1;locus_tag=C9F07_18455;partial=true;product=formate dehydrogenase;protein_id=TGD61139.1;transl_table=11 ##sequence-region PYKI01000174.1 1 851 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000174.1 Genbank region 1 851 . + . ID=PYKI01000174.1:1..851;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000174.1 Genbank gene 1 613 . + . ID=gene-C9F07_01185;Name=C9F07_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01185;partial=true;start_range=.,1 PYKI01000174.1 Protein Homology CDS 1 613 . + 1 ID=cds-TGE30052.1;Parent=gene-C9F07_01185;Dbxref=NCBI_GP:TGE30052.1;Name=TGE30052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455074.1;locus_tag=C9F07_01185;partial=true;product=DNA-binding transcriptional repressor AcrR;protein_id=TGE30052.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001891.1 1 850 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001891.1 Genbank region 1 850 . + . ID=PYKI01001891.1:1..850;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001891.1 Genbank gene 1 850 . + . ID=gene-C9F07_18255;Name=invG;end_range=850,.;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=C9F07_18255;partial=true;start_range=.,1 PYKI01001891.1 Protein Homology CDS 1 850 . + 1 ID=cds-TGD61804.1;Parent=gene-C9F07_18255;Dbxref=NCBI_GP:TGD61804.1;Name=TGD61804.1;end_range=850,.;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=C9F07_18255;partial=true;product=type III secretion system outer membrane ring protein InvG;protein_id=TGD61804.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000274.1 1 850 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000274.1 Genbank region 1 850 . + . ID=PYKI01000274.1:1..850;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000274.1 Genbank gene 1 850 . + . ID=gene-C9F07_01770;Name=C9F07_01770;end_range=850,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01770;partial=true;start_range=.,1 PYKI01000274.1 Protein Homology CDS 1 850 . + 0 ID=cds-TGE27837.1;Parent=gene-C9F07_01770;Dbxref=NCBI_GP:TGE27837.1;Name=TGE27837.1;end_range=850,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=C9F07_01770;partial=true;product=ATP-dependent protease;protein_id=TGE27837.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002528.1 1 849 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002528.1 Genbank region 1 849 . + . ID=PYKI01002528.1:1..849;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002528.1 Genbank gene 1 179 . + . ID=gene-C9F07_25090;Name=C9F07_25090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25090;partial=true;start_range=.,1 PYKI01002528.1 Protein Homology CDS 1 179 . + 2 ID=cds-TGD50053.1;Parent=gene-C9F07_25090;Dbxref=NCBI_GP:TGD50053.1;Name=TGD50053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=C9F07_25090;partial=true;product=threonylcarbamoyl-AMP synthase;protein_id=TGD50053.1;start_range=.,1;transl_table=11 PYKI01002528.1 Genbank gene 280 849 . + . ID=gene-C9F07_25095;Name=C9F07_25095;end_range=849,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25095;partial=true PYKI01002528.1 Protein Homology CDS 280 849 . + 0 ID=cds-TGD50054.1;Parent=gene-C9F07_25095;Dbxref=NCBI_GP:TGD50054.1;Name=TGD50054.1;end_range=849,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455778.1;locus_tag=C9F07_25095;partial=true;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=TGD50054.1;transl_table=11 ##sequence-region PYKI01000914.1 1 848 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000914.1 Genbank region 1 848 . + . ID=PYKI01000914.1:1..848;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000914.1 Genbank gene 1 346 . + . ID=gene-C9F07_08325;Name=C9F07_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08325;partial=true;start_range=.,1 PYKI01000914.1 Protein Homology CDS 1 346 . + 1 ID=cds-TGE03011.1;Parent=gene-C9F07_08325;Dbxref=NCBI_GP:TGE03011.1;Name=TGE03011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455237.1;locus_tag=C9F07_08325;partial=true;product=rRNA maturation RNase YbeY;protein_id=TGE03011.1;start_range=.,1;transl_table=11 PYKI01000914.1 Genbank gene 504 848 . + . ID=gene-C9F07_08330;Name=C9F07_08330;end_range=848,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08330;partial=true PYKI01000914.1 Protein Homology CDS 504 848 . + 0 ID=cds-TGE03012.1;Parent=gene-C9F07_08330;Dbxref=NCBI_GP:TGE03012.1;Name=TGE03012.1;Note=involved in the transport of magnesium and cobalt ions;end_range=848,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004859572.1;locus_tag=C9F07_08330;partial=true;product=magnesium/cobalt efflux protein;protein_id=TGE03012.1;transl_table=11 ##sequence-region PYKI01002340.1 1 848 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002340.1 Genbank region 1 848 . + . ID=PYKI01002340.1:1..848;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002340.1 Genbank gene 1 504 . + . ID=gene-C9F07_22970;Name=C9F07_22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22970;partial=true;start_range=.,1 PYKI01002340.1 Protein Homology CDS 1 504 . + 0 ID=cds-TGD53522.1;Parent=gene-C9F07_22970;Dbxref=NCBI_GP:TGD53522.1;Name=TGD53522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458690.1;locus_tag=C9F07_22970;partial=true;product=phage tail protein;protein_id=TGD53522.1;start_range=.,1;transl_table=11 PYKI01002340.1 Genbank gene 514 848 . + . ID=gene-C9F07_22975;Name=C9F07_22975;end_range=848,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22975;partial=true PYKI01002340.1 Protein Homology CDS 514 848 . + 0 ID=cds-TGD53523.1;Parent=gene-C9F07_22975;Dbxref=NCBI_GP:TGD53523.1;Name=TGD53523.1;end_range=848,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458689.1;locus_tag=C9F07_22975;partial=true;product=phage tail protein;protein_id=TGD53523.1;transl_table=11 ##sequence-region PYKI01001619.1 1 847 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001619.1 Genbank region 1 847 . + . ID=PYKI01001619.1:1..847;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001619.1 Genbank pseudogene 129 847 . - . ID=gene-C9F07_15445;Name=C9F07_15445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15445;pseudo=true PYKI01001619.1 Protein Homology CDS 129 847 . - 2 ID=cds-C9F07_15445;Parent=gene-C9F07_15445;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455781.1;locus_tag=C9F07_15445;product=protease SohB;pseudo=true;transl_table=11 ##sequence-region PYKI01002426.1 1 847 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002426.1 Genbank region 1 847 . + . ID=PYKI01002426.1:1..847;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002426.1 Genbank gene 35 847 . - . ID=gene-C9F07_23985;Name=C9F07_23985;end_range=847,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23985;partial=true PYKI01002426.1 Protein Homology CDS 35 847 . - 0 ID=cds-TGD51370.1;Parent=gene-C9F07_23985;Dbxref=NCBI_GP:TGD51370.1;Name=TGD51370.1;Note=catalyzes the oxidative deamination of D-amino acids;end_range=847,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456310.1;locus_tag=C9F07_23985;partial=true;product=D-amino acid dehydrogenase small subunit;protein_id=TGD51370.1;transl_table=11 ##sequence-region PYKI01000626.1 1 847 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000626.1 Genbank region 1 847 . + . ID=PYKI01000626.1:1..847;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000626.1 Genbank gene 1 619 . + . ID=gene-C9F07_05405;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=C9F07_05405;partial=true;start_range=.,1 PYKI01000626.1 Protein Homology CDS 1 619 . + 1 ID=cds-TGE13435.1;Parent=gene-C9F07_05405;Dbxref=NCBI_GP:TGE13435.1;Name=TGE13435.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459719.1;locus_tag=C9F07_05405;partial=true;product=succinate dehydrogenase flavoprotein subunit;protein_id=TGE13435.1;start_range=.,1;transl_table=11 PYKI01000626.1 Genbank gene 636 847 . + . ID=gene-C9F07_05410;Name=sdhB;end_range=847,.;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=C9F07_05410;partial=true PYKI01000626.1 Protein Homology CDS 636 847 . + 0 ID=cds-TGE13436.1;Parent=gene-C9F07_05410;Dbxref=NCBI_GP:TGE13436.1;Name=TGE13436.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;end_range=847,.;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=C9F07_05410;partial=true;product=succinate dehydrogenase iron-sulfur subunit;protein_id=TGE13436.1;transl_table=11 ##sequence-region PYKI01003380.1 1 846 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003380.1 Genbank region 1 846 . + . ID=PYKI01003380.1:1..846;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003380.1 Genbank gene 64 336 . + . ID=gene-C9F07_34035;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=C9F07_34035 PYKI01003380.1 Protein Homology CDS 64 336 . + 0 ID=cds-TGD34424.1;Parent=gene-C9F07_34035;Dbxref=NCBI_GP:TGD34424.1;Name=TGD34424.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457250.1;locus_tag=C9F07_34035;product=hydrogenase assembly protein HypC;protein_id=TGD34424.1;transl_table=11 PYKI01003380.1 Genbank gene 336 846 . + . ID=gene-C9F07_34040;Name=hypD;end_range=846,.;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=C9F07_34040;partial=true PYKI01003380.1 Protein Homology CDS 336 846 . + 0 ID=cds-TGD34423.1;Parent=gene-C9F07_34040;Dbxref=NCBI_GP:TGD34423.1;Name=TGD34423.1;end_range=846,.;gbkey=CDS;gene=hypD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457251.1;locus_tag=C9F07_34040;partial=true;product=hydrogenase formation protein HypD;protein_id=TGD34423.1;transl_table=11 ##sequence-region PYKI01001366.1 1 3542 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001366.1 Genbank region 1 3542 . + . ID=PYKI01001366.1:1..3542;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001366.1 Genbank pseudogene 1 286 . - . ID=gene-C9F07_12835;Name=C9F07_12835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12835;pseudo=true PYKI01001366.1 Protein Homology CDS 1 286 . - 0 ID=cds-C9F07_12835;Parent=gene-C9F07_12835;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457439.1;locus_tag=C9F07_12835;product=peptide chain release factor 2;pseudo=true;transl_table=11 PYKI01001366.1 Genbank gene 391 2124 . - . ID=gene-C9F07_12840;Name=C9F07_12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12840 PYKI01001366.1 Protein Homology CDS 391 2124 . - 0 ID=cds-TGD84783.1;Parent=gene-C9F07_12840;Dbxref=NCBI_GP:TGD84783.1;Name=TGD84783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=C9F07_12840;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=TGD84783.1;transl_table=11 PYKI01001366.1 Genbank gene 2130 2843 . - . ID=gene-C9F07_12845;Name=C9F07_12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12845 PYKI01001366.1 Protein Homology CDS 2130 2843 . - 0 ID=cds-TGD84784.1;Parent=gene-C9F07_12845;Dbxref=NCBI_GP:TGD84784.1;Name=TGD84784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457441.1;locus_tag=C9F07_12845;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=TGD84784.1;transl_table=11 PYKI01001366.1 Genbank gene 2867 3542 . - . ID=gene-C9F07_12850;Name=xerD;end_range=3542,.;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=C9F07_12850;partial=true PYKI01001366.1 Protein Homology CDS 2867 3542 . - 1 ID=cds-TGD84785.1;Parent=gene-C9F07_12850;Dbxref=NCBI_GP:TGD84785.1;Name=TGD84785.1;end_range=3542,.;gbkey=CDS;gene=xerD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457442.1;locus_tag=C9F07_12850;partial=true;product=site-specific tyrosine recombinase XerD;protein_id=TGD84785.1;transl_table=11 ##sequence-region PYKI01002142.1 1 845 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002142.1 Genbank region 1 845 . + . ID=PYKI01002142.1:1..845;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002142.1 Genbank gene 1 845 . + . ID=gene-C9F07_20770;Name=C9F07_20770;end_range=845,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20770;partial=true;start_range=.,1 PYKI01002142.1 Protein Homology CDS 1 845 . + 0 ID=cds-TGD57812.1;Parent=gene-C9F07_20770;Dbxref=NCBI_GP:TGD57812.1;Name=TGD57812.1;end_range=845,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456614.1;locus_tag=C9F07_20770;partial=true;product=exodeoxyribonuclease I;protein_id=TGD57812.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000969.1 1 844 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000969.1 Genbank region 1 844 . + . ID=PYKI01000969.1:1..844;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000969.1 Genbank gene 1 844 . + . ID=gene-C9F07_08850;Name=metH;end_range=844,.;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=C9F07_08850;partial=true;start_range=.,1 PYKI01000969.1 Protein Homology CDS 1 844 . + 0 ID=cds-TGE00401.1;Parent=gene-C9F07_08850;Dbxref=NCBI_GP:TGE00401.1;Name=TGE00401.1;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;end_range=844,.;gbkey=CDS;gene=metH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000096005.1;locus_tag=C9F07_08850;partial=true;product=methionine synthase;protein_id=TGE00401.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001036.1 1 843 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001036.1 Genbank region 1 843 . + . ID=PYKI01001036.1:1..843;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001036.1 Genbank gene 1 843 . + . ID=gene-C9F07_09545;Name=C9F07_09545;end_range=843,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09545;partial=true;start_range=.,1 PYKI01001036.1 Protein Homology CDS 1 843 . + 0 ID=cds-TGD96873.1;Parent=gene-C9F07_09545;Dbxref=NCBI_GP:TGD96873.1;Name=TGD96873.1;end_range=843,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455377.1;locus_tag=C9F07_09545;partial=true;product=formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme;protein_id=TGD96873.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001004.1 1 842 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001004.1 Genbank region 1 842 . + . ID=PYKI01001004.1:1..842;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001004.1 Genbank gene 1 109 . - . ID=gene-C9F07_09210;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=C9F07_09210;partial=true;start_range=.,1 PYKI01001004.1 Protein Homology CDS 1 109 . - 0 ID=cds-TGD98477.1;Parent=gene-C9F07_09210;Dbxref=NCBI_GP:TGD98477.1;Name=TGD98477.1;Note=long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors;gbkey=CDS;gene=hisG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=C9F07_09210;partial=true;product=ATP phosphoribosyltransferase;protein_id=TGD98477.1;start_range=.,1;transl_table=11 PYKI01001004.1 Genbank gene 255 305 . - . ID=gene-C9F07_09215;Name=C9F07_09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09215 PYKI01001004.1 Protein Homology CDS 255 305 . - 0 ID=cds-TGD98479.1;Parent=gene-C9F07_09215;Dbxref=NCBI_GP:TGD98479.1;Name=TGD98479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=C9F07_09215;product=his operon leader peptide;protein_id=TGD98479.1;transl_table=11 PYKI01001004.1 Genbank gene 468 842 . + . ID=gene-C9F07_09220;Name=C9F07_09220;end_range=842,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09220;partial=true PYKI01001004.1 Protein Homology CDS 468 842 . + 0 ID=cds-TGD98478.1;Parent=gene-C9F07_09220;Dbxref=NCBI_GP:TGD98478.1;Name=TGD98478.1;end_range=842,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456617.1;locus_tag=C9F07_09220;partial=true;product=NAD(P)-dependent oxidoreductase;protein_id=TGD98478.1;transl_table=11 ##sequence-region PYKI01002295.1 1 841 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002295.1 Genbank region 1 841 . + . ID=PYKI01002295.1:1..841;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002295.1 Genbank gene 1 155 . + . ID=gene-C9F07_22525;Name=C9F07_22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22525;partial=true;start_range=.,1 PYKI01002295.1 Protein Homology CDS 1 155 . + 2 ID=cds-TGD54539.1;Parent=gene-C9F07_22525;Dbxref=NCBI_GP:TGD54539.1;Name=TGD54539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458816.1;locus_tag=C9F07_22525;partial=true;product=ascorbate 6-phosphate lactonase;protein_id=TGD54539.1;start_range=.,1;transl_table=11 PYKI01002295.1 Genbank gene 260 841 . + . ID=gene-C9F07_22530;Name=C9F07_22530;end_range=841,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22530;partial=true PYKI01002295.1 Protein Homology CDS 260 841 . + 0 ID=cds-TGD54540.1;Parent=gene-C9F07_22530;Dbxref=NCBI_GP:TGD54540.1;Name=TGD54540.1;end_range=841,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458815.1;locus_tag=C9F07_22530;partial=true;product=HTH-type transcriptional regulator UlaR;protein_id=TGD54540.1;transl_table=11 ##sequence-region PYKI01001770.1 1 841 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001770.1 Genbank region 1 841 . + . ID=PYKI01001770.1:1..841;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001770.1 Genbank gene 1 104 . - . ID=gene-C9F07_17005;Name=C9F07_17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17005;partial=true;start_range=.,1 PYKI01001770.1 Protein Homology CDS 1 104 . - 0 ID=cds-TGD66968.1;Parent=gene-C9F07_17005;Dbxref=NCBI_GP:TGD66968.1;Name=TGD66968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016149774.1;locus_tag=C9F07_17005;partial=true;product=2-(5'-triphosphoribosyl)-3'-dephospho CoA synthase;protein_id=TGD66968.1;start_range=.,1;transl_table=11 PYKI01001770.1 Genbank gene 108 841 . - . ID=gene-C9F07_17010;Name=C9F07_17010;end_range=841,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17010;partial=true PYKI01001770.1 Protein Homology CDS 108 841 . - 2 ID=cds-TGD66969.1;Parent=gene-C9F07_17010;Dbxref=NCBI_GP:TGD66969.1;Name=TGD66969.1;Note=citrate-ACP transferase%2C the alpha subunit catalyzes the formation of (3S)-citryl-CoA from acetyl-CoA and citrate;end_range=841,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=C9F07_17010;partial=true;product=citrate lyase subunit alpha;protein_id=TGD66969.1;transl_table=11 ##sequence-region PYKI01003294.1 1 841 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003294.1 Genbank region 1 841 . + . ID=PYKI01003294.1:1..841;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003294.1 Genbank gene 75 841 . - . ID=gene-C9F07_33125;Name=C9F07_33125;end_range=841,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33125;partial=true PYKI01003294.1 Protein Homology CDS 75 841 . - 2 ID=cds-TGD36076.1;Parent=gene-C9F07_33125;Dbxref=NCBI_GP:TGD36076.1;Name=TGD36076.1;Note=NAD-binding;end_range=841,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=C9F07_33125;partial=true;product=L-idonate 5-dehydrogenase;protein_id=TGD36076.1;transl_table=11 ##sequence-region PYKI01003392.1 1 840 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003392.1 Genbank region 1 840 . + . ID=PYKI01003392.1:1..840;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003392.1 Genbank gene 505 840 . + . ID=gene-C9F07_34125;Name=C9F07_34125;end_range=840,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34125;partial=true PYKI01003392.1 Protein Homology CDS 505 840 . + 0 ID=cds-TGD34145.1;Parent=gene-C9F07_34125;Dbxref=NCBI_GP:TGD34145.1;Name=TGD34145.1;end_range=840,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456665.1;locus_tag=C9F07_34125;partial=true;product=hypothetical protein;protein_id=TGD34145.1;transl_table=11 ##sequence-region PYKI01002852.1 1 840 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002852.1 Genbank region 1 840 . + . ID=PYKI01002852.1:1..840;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002852.1 Genbank pseudogene 97 237 . - . ID=gene-C9F07_28500;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=pseudogene;locus_tag=C9F07_28500;pseudo=true PYKI01002852.1 Protein Homology CDS 97 237 . - 0 ID=cds-C9F07_28500;Parent=gene-C9F07_28500;Note=formate hydrogenlyase subunit 4%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=hycD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457244.1;locus_tag=C9F07_28500;product=hydrogenase 3 membrane subunit;pseudo=true;transl_table=11 PYKI01002852.1 Genbank gene 240 840 . - . ID=gene-C9F07_28505;Name=C9F07_28505;end_range=840,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28505;partial=true PYKI01002852.1 Protein Homology CDS 240 840 . - 1 ID=cds-TGD45533.1;Parent=gene-C9F07_28505;Dbxref=NCBI_GP:TGD45533.1;Name=TGD45533.1;Note=catalyzes the oxidation of formate to carbon dioxide and molecular hydrogen%3B formate hydrogenlyase comprises of a formate dehydrogenase%2C unidentified electron carriers and a hydrogenase (subunit 3);end_range=840,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=C9F07_28505;partial=true;product=formate hydrogenlyase subunit 3;protein_id=TGD45533.1;transl_table=11 ##sequence-region PYKI01002446.1 1 838 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002446.1 Genbank region 1 838 . + . ID=PYKI01002446.1:1..838;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002446.1 Genbank gene 3 509 . + . ID=gene-C9F07_24185;Name=C9F07_24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24185 PYKI01002446.1 Protein Homology CDS 3 509 . + 0 ID=cds-TGD50964.1;Parent=gene-C9F07_24185;Dbxref=NCBI_GP:TGD50964.1;Name=TGD50964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862350.1;locus_tag=C9F07_24185;product=peptide ABC transporter permease;protein_id=TGD50964.1;transl_table=11 PYKI01002446.1 Genbank pseudogene 519 764 . + . ID=gene-C9F07_24190;Name=C9F07_24190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24190;pseudo=true PYKI01002446.1 Protein Homology CDS 519 764 . + 0 ID=cds-C9F07_24190;Parent=gene-C9F07_24190;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=C9F07_24190;product=dipeptide ABC transporter permease DppC;pseudo=true;transl_table=11 ##sequence-region PYKI01001299.1 1 3529 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001299.1 Genbank region 1 3529 . + . ID=PYKI01001299.1:1..3529;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001299.1 Genbank gene 1 636 . - . ID=gene-C9F07_12160;Name=C9F07_12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12160;partial=true;start_range=.,1 PYKI01001299.1 Protein Homology CDS 1 636 . - 0 ID=cds-TGD87195.1;Parent=gene-C9F07_12160;Dbxref=NCBI_GP:TGD87195.1;Name=TGD87195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455867.1;locus_tag=C9F07_12160;partial=true;product=hypothetical protein;protein_id=TGD87195.1;start_range=.,1;transl_table=11 PYKI01001299.1 Genbank gene 773 1453 . - . ID=gene-C9F07_12165;Name=C9F07_12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12165 PYKI01001299.1 Protein Homology CDS 773 1453 . - 0 ID=cds-TGD87191.1;Parent=gene-C9F07_12165;Dbxref=NCBI_GP:TGD87191.1;Name=TGD87191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455868.1;locus_tag=C9F07_12165;product=amino acid ABC transporter permease;protein_id=TGD87191.1;transl_table=11 PYKI01001299.1 Genbank gene 1450 2181 . - . ID=gene-C9F07_12170;Name=C9F07_12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12170 PYKI01001299.1 Protein Homology CDS 1450 2181 . - 0 ID=cds-TGD87192.1;Parent=gene-C9F07_12170;Dbxref=NCBI_GP:TGD87192.1;Name=TGD87192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455869.1;locus_tag=C9F07_12170;product=amino acid ABC transporter ATP-binding protein;protein_id=TGD87192.1;transl_table=11 PYKI01001299.1 Genbank gene 2206 2853 . - . ID=gene-C9F07_12175;Name=C9F07_12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12175 PYKI01001299.1 Protein Homology CDS 2206 2853 . - 0 ID=cds-TGD87193.1;Parent=gene-C9F07_12175;Dbxref=NCBI_GP:TGD87193.1;Name=TGD87193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=C9F07_12175;product=amino acid ABC transporter permease;protein_id=TGD87193.1;transl_table=11 PYKI01001299.1 Genbank gene 2860 3498 . - . ID=gene-C9F07_12180;Name=C9F07_12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12180 PYKI01001299.1 Protein Homology CDS 2860 3498 . - 0 ID=cds-TGD87194.1;Parent=gene-C9F07_12180;Dbxref=NCBI_GP:TGD87194.1;Name=TGD87194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764193.1;locus_tag=C9F07_12180;product=amino acid-binding protein;protein_id=TGD87194.1;transl_table=11 ##sequence-region PYKI01002163.1 1 836 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002163.1 Genbank region 1 836 . + . ID=PYKI01002163.1:1..836;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002163.1 Genbank gene 1 279 . - . ID=gene-C9F07_21005;Name=C9F07_21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21005;partial=true;start_range=.,1 PYKI01002163.1 Protein Homology CDS 1 279 . - 0 ID=cds-TGD57223.1;Parent=gene-C9F07_21005;Dbxref=NCBI_GP:TGD57223.1;Name=TGD57223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460785.1;locus_tag=C9F07_21005;partial=true;product=hypothetical protein;protein_id=TGD57223.1;start_range=.,1;transl_table=11 PYKI01002163.1 Genbank gene 429 836 . + . ID=gene-C9F07_21010;Name=C9F07_21010;end_range=836,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21010;partial=true PYKI01002163.1 Protein Homology CDS 429 836 . + 0 ID=cds-TGD57222.1;Parent=gene-C9F07_21010;Dbxref=NCBI_GP:TGD57222.1;Name=TGD57222.1;end_range=836,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456336.1;locus_tag=C9F07_21010;partial=true;product=PTS mannose transporter subunit IID;protein_id=TGD57222.1;transl_table=11 ##sequence-region PYKI01000380.1 1 835 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000380.1 Genbank region 1 835 . + . ID=PYKI01000380.1:1..835;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000380.1 Genbank gene 626 820 . - . ID=gene-C9F07_02875;Name=C9F07_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02875 PYKI01000380.1 Protein Homology CDS 626 820 . - 0 ID=cds-TGE23176.1;Parent=gene-C9F07_02875;Dbxref=NCBI_GP:TGE23176.1;Name=TGE23176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240211.1;locus_tag=C9F07_02875;product=hypothetical protein;protein_id=TGE23176.1;transl_table=11 ##sequence-region PYKI01000464.1 1 834 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000464.1 Genbank region 1 834 . + . ID=PYKI01000464.1:1..834;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000464.1 Genbank gene 1 156 . - . ID=gene-C9F07_03645;Name=C9F07_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03645;partial=true;start_range=.,1 PYKI01000464.1 Protein Homology CDS 1 156 . - 0 ID=cds-TGE19766.1;Parent=gene-C9F07_03645;Dbxref=NCBI_GP:TGE19766.1;Name=TGE19766.1;Note=response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312633.1;locus_tag=C9F07_03645;partial=true;product=transcriptional regulator UhpA;protein_id=TGE19766.1;start_range=.,1;transl_table=11 PYKI01000464.1 Genbank pseudogene 231 794 . - . ID=gene-C9F07_03650;Name=C9F07_03650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03650;pseudo=true PYKI01000464.1 Protein Homology CDS 231 794 . - 0 ID=cds-C9F07_03650;Parent=gene-C9F07_03650;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458146.1;locus_tag=C9F07_03650;product=DUF4432 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002976.1 1 833 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002976.1 Genbank region 1 833 . + . ID=PYKI01002976.1:1..833;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002976.1 Genbank pseudogene 62 833 . - . ID=gene-C9F07_29840;Name=C9F07_29840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29840;pseudo=true PYKI01002976.1 Protein Homology CDS 62 833 . - 1 ID=cds-C9F07_29840;Parent=gene-C9F07_29840;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=C9F07_29840;product=glycogen debranching enzyme;pseudo=true;transl_table=11 ##sequence-region PYKI01002179.1 1 833 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002179.1 Genbank region 1 833 . + . ID=PYKI01002179.1:1..833;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002179.1 Genbank gene 1 476 . + . ID=gene-C9F07_21175;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=C9F07_21175;partial=true;start_range=.,1 PYKI01002179.1 Protein Homology CDS 1 476 . + 2 ID=cds-TGD56826.1;Parent=gene-C9F07_21175;Dbxref=NCBI_GP:TGD56826.1;Name=TGD56826.1;Note=catalyzes the reduction of tartronate semialdehyde to glycerate;gbkey=CDS;gene=garR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=C9F07_21175;partial=true;product=2-hydroxy-3-oxopropionate reductase;protein_id=TGD56826.1;start_range=.,1;transl_table=11 PYKI01002179.1 Genbank gene 574 833 . + . ID=gene-C9F07_21180;Name=C9F07_21180;end_range=833,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21180;partial=true PYKI01002179.1 Protein Homology CDS 574 833 . + 0 ID=cds-TGD56827.1;Parent=gene-C9F07_21180;Dbxref=NCBI_GP:TGD56827.1;Name=TGD56827.1;end_range=833,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457633.1;locus_tag=C9F07_21180;partial=true;product=glycerate 2-kinase;protein_id=TGD56827.1;transl_table=11 ##sequence-region PYKI01002581.1 1 833 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002581.1 Genbank region 1 833 . + . ID=PYKI01002581.1:1..833;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002581.1 Genbank gene 1 833 . - . ID=gene-C9F07_25625;Name=C9F07_25625;end_range=833,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25625;partial=true;start_range=.,1 PYKI01002581.1 Protein Homology CDS 1 833 . - 1 ID=cds-TGD49734.1;Parent=gene-C9F07_25625;Dbxref=NCBI_GP:TGD49734.1;Name=TGD49734.1;end_range=833,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=C9F07_25625;partial=true;product=cardiolipin synthase ClsB;protein_id=TGD49734.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003483.1 1 832 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003483.1 Genbank region 1 832 . + . ID=PYKI01003483.1:1..832;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003483.1 Genbank gene 136 390 . + . ID=gene-C9F07_35050;Name=C9F07_35050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35050 PYKI01003483.1 Protein Homology CDS 136 390 . + 0 ID=cds-TGD32492.1;Parent=gene-C9F07_35050;Dbxref=NCBI_GP:TGD32492.1;Name=TGD32492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456304.1;locus_tag=C9F07_35050;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=TGD32492.1;transl_table=11 PYKI01003483.1 Genbank gene 453 832 . - . ID=gene-C9F07_35055;Name=treA;end_range=832,.;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=C9F07_35055;partial=true PYKI01003483.1 Protein Homology CDS 453 832 . - 2 ID=cds-TGD32493.1;Parent=gene-C9F07_35055;Dbxref=NCBI_GP:TGD32493.1;Name=TGD32493.1;Note=periplasmic%3B catalyzes the hydrolysis of trehalose to glucose which can then be imported into the cell;end_range=832,.;gbkey=CDS;gene=treA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=C9F07_35055;partial=true;product=alpha%2Calpha-trehalase;protein_id=TGD32493.1;transl_table=11 ##sequence-region PYKI01000398.1 1 831 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000398.1 Genbank region 1 831 . + . ID=PYKI01000398.1:1..831;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000398.1 Genbank pseudogene 1 392 . + . ID=gene-C9F07_03020;Name=C9F07_03020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03020;pseudo=true PYKI01000398.1 Protein Homology CDS 1 392 . + 2 ID=cds-C9F07_03020;Parent=gene-C9F07_03020;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=C9F07_03020;product=penicillin-binding protein activator;pseudo=true;transl_table=11 PYKI01000398.1 Genbank pseudogene 395 831 . - . ID=gene-C9F07_03025;Name=C9F07_03025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03025;pseudo=true PYKI01000398.1 Protein Homology CDS 395 831 . - 2 ID=cds-C9F07_03025;Parent=gene-C9F07_03025;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=C9F07_03025;product=penicillin-binding protein activator;pseudo=true;transl_table=11 ##sequence-region PYKI01002523.1 1 3528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002523.1 Genbank region 1 3528 . + . ID=PYKI01002523.1:1..3528;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002523.1 Genbank pseudogene 8 727 . - . ID=gene-C9F07_25030;Name=C9F07_25030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25030;pseudo=true PYKI01002523.1 Protein Homology CDS 8 727 . - 0 ID=cds-C9F07_25030;Parent=gene-C9F07_25030;Note=Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=C9F07_25030;product=GMP synthase;pseudo=true;transl_table=11 PYKI01002523.1 Genbank gene 742 2034 . - . ID=gene-C9F07_25035;Name=C9F07_25035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25035 PYKI01002523.1 Protein Homology CDS 742 2034 . - 0 ID=cds-TGD50086.1;Parent=gene-C9F07_25035;Dbxref=NCBI_GP:TGD50086.1;Name=TGD50086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456972.1;locus_tag=C9F07_25035;product=transcriptional regulator PtsJ;protein_id=TGD50086.1;transl_table=11 PYKI01002523.1 Genbank gene 2117 2983 . + . ID=gene-C9F07_25040;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;locus_tag=C9F07_25040 PYKI01002523.1 Protein Homology CDS 2117 2983 . + 0 ID=cds-TGD50087.1;Parent=gene-C9F07_25040;Dbxref=NCBI_GP:TGD50087.1;Name=TGD50087.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;gene=pdxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=C9F07_25040;product=bifunctional pyridoxal kinase/hydroxymethylpyrimidine kinase;protein_id=TGD50087.1;transl_table=11 PYKI01002523.1 Genbank gene 2980 3219 . + . ID=gene-C9F07_25045;Name=C9F07_25045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25045 PYKI01002523.1 Protein Homology CDS 2980 3219 . + 0 ID=cds-TGD50088.1;Parent=gene-C9F07_25045;Dbxref=NCBI_GP:TGD50088.1;Name=TGD50088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=C9F07_25045;product=cytoplasmic protein;protein_id=TGD50088.1;transl_table=11 ##sequence-region PYKI01003152.1 1 830 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003152.1 Genbank region 1 830 . + . ID=PYKI01003152.1:1..830;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003152.1 Genbank gene 1 425 . + . ID=gene-C9F07_31610;Name=C9F07_31610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31610;partial=true;start_range=.,1 PYKI01003152.1 Protein Homology CDS 1 425 . + 2 ID=cds-TGD38351.1;Parent=gene-C9F07_31610;Dbxref=NCBI_GP:TGD38351.1;Name=TGD38351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456061.1;locus_tag=C9F07_31610;partial=true;product=two-component sensor histidine kinase;protein_id=TGD38351.1;start_range=.,1;transl_table=11 PYKI01003152.1 Genbank gene 501 830 . + . ID=gene-C9F07_31615;Name=C9F07_31615;end_range=830,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31615;partial=true PYKI01003152.1 Protein Homology CDS 501 830 . + 0 ID=cds-TGD38352.1;Parent=gene-C9F07_31615;Dbxref=NCBI_GP:TGD38352.1;Name=TGD38352.1;end_range=830,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=C9F07_31615;partial=true;product=DNA replication terminus site-binding protein;protein_id=TGD38352.1;transl_table=11 ##sequence-region PYKI01002432.1 1 829 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002432.1 Genbank region 1 829 . + . ID=PYKI01002432.1:1..829;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002432.1 Genbank gene 1 712 . - . ID=gene-C9F07_24035;Name=C9F07_24035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24035;partial=true;start_range=.,1 PYKI01002432.1 Protein Homology CDS 1 712 . - 0 ID=cds-TGD51251.1;Parent=gene-C9F07_24035;Dbxref=NCBI_GP:TGD51251.1;Name=TGD51251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=C9F07_24035;partial=true;product=hydrogenase 2 large subunit;protein_id=TGD51251.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000937.1 1 829 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000937.1 Genbank region 1 829 . + . ID=PYKI01000937.1:1..829;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000937.1 Genbank pseudogene 1 768 . - . ID=gene-C9F07_08545;Name=C9F07_08545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08545;pseudo=true PYKI01000937.1 Protein Homology CDS 1 768 . - 0 ID=cds-C9F07_08545;Parent=gene-C9F07_08545;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462999.1;locus_tag=C9F07_08545;product=phosphoenolpyruvate carboxylase;pseudo=true;transl_table=11 ##sequence-region PYKI01002735.1 1 829 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002735.1 Genbank region 1 829 . + . ID=PYKI01002735.1:1..829;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002735.1 Genbank gene 1 398 . - . ID=gene-C9F07_27285;Name=C9F07_27285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27285;partial=true;start_range=.,1 PYKI01002735.1 Protein Homology CDS 1 398 . - 0 ID=cds-TGD47259.1;Parent=gene-C9F07_27285;Dbxref=NCBI_GP:TGD47259.1;Name=TGD47259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080411.1;locus_tag=C9F07_27285;partial=true;product=hypothetical protein;protein_id=TGD47259.1;start_range=.,1;transl_table=11 PYKI01002735.1 Genbank gene 456 827 . - . ID=gene-C9F07_27290;Name=C9F07_27290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27290 PYKI01002735.1 Protein Homology CDS 456 827 . - 0 ID=cds-TGD47260.1;Parent=gene-C9F07_27290;Dbxref=NCBI_GP:TGD47260.1;Name=TGD47260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668372.1;locus_tag=C9F07_27290;product=hypothetical protein;protein_id=TGD47260.1;transl_table=11 ##sequence-region PYKI01002625.1 1 829 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002625.1 Genbank region 1 829 . + . ID=PYKI01002625.1:1..829;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002625.1 Genbank gene 441 829 . + . ID=gene-C9F07_26130;Name=C9F07_26130;end_range=829,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26130;partial=true PYKI01002625.1 Protein Homology CDS 441 829 . + 0 ID=cds-TGD49481.1;Parent=gene-C9F07_26130;Dbxref=NCBI_GP:TGD49481.1;Name=TGD49481.1;end_range=829,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458973.1;locus_tag=C9F07_26130;partial=true;product=molecular chaperone OsmY;protein_id=TGD49481.1;transl_table=11 ##sequence-region PYKI01000673.1 1 828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000673.1 Genbank region 1 828 . + . ID=PYKI01000673.1:1..828;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000673.1 Genbank gene 1 828 . + . ID=gene-C9F07_05860;Name=dagR;end_range=828,.;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=C9F07_05860;partial=true;start_range=.,1 PYKI01000673.1 Protein Homology CDS 1 828 . + 1 ID=cds-TGE11682.1;Parent=gene-C9F07_05860;Dbxref=NCBI_GP:TGE11682.1;Name=TGE11682.1;end_range=828,.;gbkey=CDS;gene=dagR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=C9F07_05860;partial=true;product=transcriptional regulator DagR;protein_id=TGE11682.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002461.1 1 828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002461.1 Genbank region 1 828 . + . ID=PYKI01002461.1:1..828;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002461.1 Genbank gene 55 522 . - . ID=gene-C9F07_24300;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=C9F07_24300 PYKI01002461.1 Protein Homology CDS 55 522 . - 0 ID=cds-TGD50760.1;Parent=gene-C9F07_24300;Dbxref=NCBI_GP:TGD50760.1;Name=TGD50760.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=C9F07_24300;product=prepilin peptidase;protein_id=TGD50760.1;transl_table=11 PYKI01002461.1 Genbank gene 545 724 . + . ID=gene-C9F07_24305;Name=C9F07_24305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24305 PYKI01002461.1 Protein Homology CDS 545 724 . + 0 ID=cds-TGD50761.1;Parent=gene-C9F07_24305;Dbxref=NCBI_GP:TGD50761.1;Name=TGD50761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664645.1;locus_tag=C9F07_24305;product=hypothetical protein;protein_id=TGD50761.1;transl_table=11 ##sequence-region PYKI01001209.1 1 827 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001209.1 Genbank region 1 827 . + . ID=PYKI01001209.1:1..827;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001209.1 Genbank gene 1 429 . - . ID=gene-C9F07_11320;Name=C9F07_11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11320;partial=true;start_range=.,1 PYKI01001209.1 Protein Homology CDS 1 429 . - 0 ID=cds-TGD91405.1;Parent=gene-C9F07_11320;Dbxref=NCBI_GP:TGD91405.1;Name=TGD91405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456513.1;locus_tag=C9F07_11320;partial=true;product=transcriptional regulator SdiA;protein_id=TGD91405.1;start_range=.,1;transl_table=11 PYKI01001209.1 Genbank gene 661 827 . - . ID=gene-C9F07_11325;Name=C9F07_11325;end_range=827,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11325;partial=true PYKI01001209.1 Protein Homology CDS 661 827 . - 2 ID=cds-TGD91404.1;Parent=gene-C9F07_11325;Dbxref=NCBI_GP:TGD91404.1;Name=TGD91404.1;end_range=827,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176121.1;locus_tag=C9F07_11325;partial=true;product=L-cystine ABC transporter ATP-binding protein YecC;protein_id=TGD91404.1;transl_table=11 ##sequence-region PYKI01002147.1 1 827 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002147.1 Genbank region 1 827 . + . ID=PYKI01002147.1:1..827;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002147.1 Genbank gene 1 216 . + . ID=gene-C9F07_20855;Name=C9F07_20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20855;partial=true;start_range=.,1 PYKI01002147.1 Protein Homology CDS 1 216 . + 0 ID=cds-TGD57470.1;Parent=gene-C9F07_20855;Dbxref=NCBI_GP:TGD57470.1;Name=TGD57470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455908.1;locus_tag=C9F07_20855;partial=true;product=colanic acid/biofilm transcriptional regulator;protein_id=TGD57470.1;start_range=.,1;transl_table=11 PYKI01002147.1 Genbank gene 272 827 . - . ID=gene-C9F07_20860;Name=C9F07_20860;end_range=827,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20860;partial=true PYKI01002147.1 Protein Homology CDS 272 827 . - 1 ID=cds-TGD57471.1;Parent=gene-C9F07_20860;Dbxref=NCBI_GP:TGD57471.1;Name=TGD57471.1;end_range=827,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=C9F07_20860;partial=true;product=hypothetical protein;protein_id=TGD57471.1;transl_table=11 ##sequence-region PYKI01001350.1 1 827 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001350.1 Genbank region 1 827 . + . ID=PYKI01001350.1:1..827;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001350.1 Genbank gene 1 693 . + . ID=gene-C9F07_12665;Name=C9F07_12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12665;partial=true;start_range=.,1 PYKI01001350.1 Protein Homology CDS 1 693 . + 0 ID=cds-TGD85239.1;Parent=gene-C9F07_12665;Dbxref=NCBI_GP:TGD85239.1;Name=TGD85239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458872.1;locus_tag=C9F07_12665;partial=true;product=PTS trehalose transporter subunit IIBC;protein_id=TGD85239.1;start_range=.,1;transl_table=11 PYKI01001350.1 Genbank gene 743 827 . + . ID=gene-C9F07_12670;Name=C9F07_12670;end_range=827,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12670;partial=true PYKI01001350.1 Protein Homology CDS 743 827 . + 0 ID=cds-TGD85240.1;Parent=gene-C9F07_12670;Dbxref=NCBI_GP:TGD85240.1;Name=TGD85240.1;end_range=827,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458871.1;locus_tag=C9F07_12670;partial=true;product=alpha%2Calpha-phosphotrehalase;protein_id=TGD85240.1;transl_table=11 ##sequence-region PYKI01001857.1 1 827 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001857.1 Genbank region 1 827 . + . ID=PYKI01001857.1:1..827;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001857.1 Genbank pseudogene 11 739 . + . ID=gene-C9F07_17860;Name=C9F07_17860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17860;pseudo=true PYKI01001857.1 Protein Homology CDS 11 739 . + 0 ID=cds-C9F07_17860;Parent=gene-C9F07_17860;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751819.1;locus_tag=C9F07_17860;product=ion channel protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003587.1 1 827 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003587.1 Genbank region 1 827 . + . ID=PYKI01003587.1:1..827;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003587.1 Genbank gene 1 827 . - . ID=gene-C9F07_36195;Name=C9F07_36195;end_range=827,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36195;partial=true;start_range=.,1 PYKI01003587.1 Protein Homology CDS 1 827 . - 0 ID=cds-TGD29911.1;Parent=gene-C9F07_36195;Dbxref=NCBI_GP:TGD29911.1;Name=TGD29911.1;end_range=827,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454767.1;locus_tag=C9F07_36195;partial=true;product=hypothetical protein;protein_id=TGD29911.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001523.1 1 826 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001523.1 Genbank region 1 826 . + . ID=PYKI01001523.1:1..826;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001523.1 Genbank gene 1 361 . - . ID=gene-C9F07_14500;Name=C9F07_14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14500;partial=true;start_range=.,1 PYKI01001523.1 Protein Homology CDS 1 361 . - 0 ID=cds-TGD76509.1;Parent=gene-C9F07_14500;Dbxref=NCBI_GP:TGD76509.1;Name=TGD76509.1;Note=catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458052.1;locus_tag=C9F07_14500;partial=true;product=stress response kinase A;protein_id=TGD76509.1;start_range=.,1;transl_table=11 PYKI01001523.1 Genbank gene 438 707 . - . ID=gene-C9F07_14505;Name=C9F07_14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14505 PYKI01001523.1 Protein Homology CDS 438 707 . - 0 ID=cds-TGD76510.1;Parent=gene-C9F07_14505;Dbxref=NCBI_GP:TGD76510.1;Name=TGD76510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=C9F07_14505;product=hypothetical protein;protein_id=TGD76510.1;transl_table=11 ##sequence-region PYKI01002119.1 1 825 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002119.1 Genbank region 1 825 . + . ID=PYKI01002119.1:1..825;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002119.1 Genbank gene 1 825 . + . ID=gene-C9F07_20520;Name=C9F07_20520;end_range=825,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20520;partial=true;start_range=.,1 PYKI01002119.1 Protein Homology CDS 1 825 . + 1 ID=cds-TGD58324.1;Parent=gene-C9F07_20520;Dbxref=NCBI_GP:TGD58324.1;Name=TGD58324.1;end_range=825,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457766.1;locus_tag=C9F07_20520;partial=true;product=potassium transporter;protein_id=TGD58324.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000990.1 1 825 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000990.1 Genbank region 1 825 . + . ID=PYKI01000990.1:1..825;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000990.1 Genbank pseudogene 26 298 . - . ID=gene-C9F07_09045;Name=C9F07_09045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09045;pseudo=true PYKI01000990.1 Protein Homology CDS 26 298 . - 0 ID=cds-C9F07_09045;Parent=gene-C9F07_09045;Note=oxygen regulated%3B required for internalization into the host cell%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457263.1;locus_tag=C9F07_09045;product=oxygen-regulated invasion protein OrgB;pseudo=true;transl_table=11 PYKI01000990.1 Genbank gene 255 797 . - . ID=gene-C9F07_09050;Name=C9F07_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09050 PYKI01000990.1 Protein Homology CDS 255 797 . - 0 ID=cds-TGD99170.1;Parent=gene-C9F07_09050;Dbxref=NCBI_GP:TGD99170.1;Name=TGD99170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457264.1;locus_tag=C9F07_09050;product=invasion protein OrgA;protein_id=TGD99170.1;transl_table=11 ##sequence-region PYKI01003061.1 1 824 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003061.1 Genbank region 1 824 . + . ID=PYKI01003061.1:1..824;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003061.1 Genbank gene 1 584 . - . ID=gene-C9F07_30700;Name=C9F07_30700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30700;partial=true;start_range=.,1 PYKI01003061.1 Protein Homology CDS 1 584 . - 0 ID=cds-TGD40964.1;Parent=gene-C9F07_30700;Dbxref=NCBI_GP:TGD40964.1;Name=TGD40964.1;Note=with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=C9F07_30700;partial=true;product=heme ABC transporter permease;protein_id=TGD40964.1;start_range=.,1;transl_table=11 PYKI01003061.1 Genbank gene 636 824 . - . ID=gene-C9F07_30705;Name=C9F07_30705;end_range=824,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30705;partial=true PYKI01003061.1 Protein Homology CDS 636 824 . - 0 ID=cds-TGD40965.1;Parent=gene-C9F07_30705;Dbxref=NCBI_GP:TGD40965.1;Name=TGD40965.1;Note=with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC;end_range=824,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456798.1;locus_tag=C9F07_30705;partial=true;product=heme exporter protein CcmB;protein_id=TGD40965.1;transl_table=11 ##sequence-region PYKI01003175.1 1 824 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003175.1 Genbank region 1 824 . + . ID=PYKI01003175.1:1..824;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003175.1 Genbank pseudogene 102 824 . - . ID=gene-C9F07_31855;Name=C9F07_31855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31855;pseudo=true PYKI01003175.1 Protein Homology CDS 102 824 . - 0 ID=cds-C9F07_31855;Parent=gene-C9F07_31855;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455269.1;locus_tag=C9F07_31855;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01002917.1 1 823 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002917.1 Genbank region 1 823 . + . ID=PYKI01002917.1:1..823;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002917.1 Genbank gene 1 265 . - . ID=gene-C9F07_29240;Name=C9F07_29240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29240;partial=true;start_range=.,1 PYKI01002917.1 Protein Homology CDS 1 265 . - 0 ID=cds-TGD43394.1;Parent=gene-C9F07_29240;Dbxref=NCBI_GP:TGD43394.1;Name=TGD43394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458859.1;locus_tag=C9F07_29240;partial=true;product=cytoplasmic protein;protein_id=TGD43394.1;start_range=.,1;transl_table=11 PYKI01002917.1 Genbank gene 265 627 . - . ID=gene-C9F07_29245;Name=C9F07_29245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29245 PYKI01002917.1 Protein Homology CDS 265 627 . - 0 ID=cds-TGD43395.1;Parent=gene-C9F07_29245;Dbxref=NCBI_GP:TGD43395.1;Name=TGD43395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458858.1;locus_tag=C9F07_29245;product=hypothetical protein;protein_id=TGD43395.1;transl_table=11 PYKI01002917.1 Genbank gene 638 823 . - . ID=gene-C9F07_29250;Name=C9F07_29250;end_range=823,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29250;partial=true PYKI01002917.1 Protein Homology CDS 638 823 . - 0 ID=cds-TGD43396.1;Parent=gene-C9F07_29250;Dbxref=NCBI_GP:TGD43396.1;Name=TGD43396.1;end_range=823,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458857.1;locus_tag=C9F07_29250;partial=true;product=glycine dehydrogenase;protein_id=TGD43396.1;transl_table=11 ##sequence-region PYKI01001382.1 1 822 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001382.1 Genbank region 1 822 . + . ID=PYKI01001382.1:1..822;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001382.1 Genbank gene 1 76 . - . ID=gene-C9F07_12985;Name=C9F07_12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12985;partial=true;start_range=.,1 PYKI01001382.1 Protein Homology CDS 1 76 . - 0 ID=cds-TGD84467.1;Parent=gene-C9F07_12985;Dbxref=NCBI_GP:TGD84467.1;Name=TGD84467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455911.1;locus_tag=C9F07_12985;partial=true;product=YgdI/YgdR family lipoprotein;protein_id=TGD84467.1;start_range=.,1;transl_table=11 PYKI01001382.1 Genbank gene 221 822 . - . ID=gene-C9F07_12990;Name=C9F07_12990;end_range=822,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12990;partial=true PYKI01001382.1 Protein Homology CDS 221 822 . - 2 ID=cds-TGD84466.1;Parent=gene-C9F07_12990;Dbxref=NCBI_GP:TGD84466.1;Name=TGD84466.1;end_range=822,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=C9F07_12990;partial=true;product=hypothetical protein;protein_id=TGD84466.1;transl_table=11 ##sequence-region PYKI01003436.1 1 822 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003436.1 Genbank region 1 822 . + . ID=PYKI01003436.1:1..822;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003436.1 Genbank gene 1 331 . + . ID=gene-C9F07_34545;Name=C9F07_34545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34545;partial=true;start_range=.,1 PYKI01003436.1 Protein Homology CDS 1 331 . + 1 ID=cds-TGD33485.1;Parent=gene-C9F07_34545;Dbxref=NCBI_GP:TGD33485.1;Name=TGD33485.1;Note=with UgpEC is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=C9F07_34545;partial=true;product=glycerol-3-phosphate transporter permease;protein_id=TGD33485.1;start_range=.,1;transl_table=11 PYKI01003436.1 Genbank gene 328 822 . + . ID=gene-C9F07_34550;Name=C9F07_34550;end_range=822,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34550;partial=true PYKI01003436.1 Protein Homology CDS 328 822 . + 0 ID=cds-TGD33486.1;Parent=gene-C9F07_34550;Dbxref=NCBI_GP:TGD33486.1;Name=TGD33486.1;end_range=822,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=C9F07_34550;partial=true;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=TGD33486.1;transl_table=11 ##sequence-region PYKI01001295.1 1 3514 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001295.1 Genbank region 1 3514 . + . ID=PYKI01001295.1:1..3514;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001295.1 Genbank pseudogene 1 663 . - . ID=gene-C9F07_12120;Name=C9F07_12120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12120;pseudo=true PYKI01001295.1 Protein Homology CDS 1 663 . - 0 ID=cds-C9F07_12120;Parent=gene-C9F07_12120;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=C9F07_12120;product=L-methionine/branched-chain amino acid transporter;pseudo=true;transl_table=11 PYKI01001295.1 Genbank gene 939 1232 . + . ID=gene-C9F07_12125;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=C9F07_12125 PYKI01001295.1 Protein Homology CDS 939 1232 . + 0 ID=cds-TGD87249.1;Parent=gene-C9F07_12125;Dbxref=NCBI_GP:TGD87249.1;Name=TGD87249.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=C9F07_12125;product=co-chaperone GroES;protein_id=TGD87249.1;transl_table=11 PYKI01001295.1 Genbank pseudogene 1276 2922 . + . ID=gene-C9F07_12130;Name=groL;gbkey=Gene;gene=groL;gene_biotype=pseudogene;locus_tag=C9F07_12130;pseudo=true PYKI01001295.1 Protein Homology CDS 1276 2922 . + 0 ID=cds-C9F07_12130;Parent=gene-C9F07_12130;Note=internal stop;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=C9F07_12130;product=chaperonin GroEL;pseudo=true;transl_table=11 PYKI01001295.1 Genbank gene 3166 3514 . + . ID=gene-C9F07_12135;Name=C9F07_12135;end_range=3514,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12135;partial=true PYKI01001295.1 Protein Homology CDS 3166 3514 . + 0 ID=cds-TGD87250.1;Parent=gene-C9F07_12135;Dbxref=NCBI_GP:TGD87250.1;Name=TGD87250.1;end_range=3514,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463195.2;locus_tag=C9F07_12135;partial=true;product=DUF4156 domain-containing protein;protein_id=TGD87250.1;transl_table=11 ##sequence-region PYKI01002577.1 1 821 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002577.1 Genbank region 1 821 . + . ID=PYKI01002577.1:1..821;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002577.1 Genbank gene 1 510 . + . ID=gene-C9F07_25595;Name=C9F07_25595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25595;partial=true;start_range=.,1 PYKI01002577.1 Protein Homology CDS 1 510 . + 0 ID=cds-TGD49752.1;Parent=gene-C9F07_25595;Dbxref=NCBI_GP:TGD49752.1;Name=TGD49752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462899.1;locus_tag=C9F07_25595;partial=true;product=alpha-glucosidase;protein_id=TGD49752.1;start_range=.,1;transl_table=11 PYKI01002577.1 Genbank gene 556 821 . + . ID=gene-C9F07_25600;Name=C9F07_25600;end_range=821,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25600;partial=true PYKI01002577.1 Protein Homology CDS 556 821 . + 0 ID=cds-TGD49753.1;Parent=gene-C9F07_25600;Dbxref=NCBI_GP:TGD49753.1;Name=TGD49753.1;end_range=821,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462898.1;locus_tag=C9F07_25600;partial=true;product=permease;protein_id=TGD49753.1;transl_table=11 ##sequence-region PYKI01003086.1 1 820 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003086.1 Genbank region 1 820 . + . ID=PYKI01003086.1:1..820;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003086.1 Genbank gene 1 321 . + . ID=gene-C9F07_30895;Name=C9F07_30895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30895;partial=true;start_range=.,1 PYKI01003086.1 Protein Homology CDS 1 321 . + 0 ID=cds-TGD40088.1;Parent=gene-C9F07_30895;Dbxref=NCBI_GP:TGD40088.1;Name=TGD40088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458611.1;locus_tag=C9F07_30895;partial=true;product=AraC family transcriptional regulator;protein_id=TGD40088.1;start_range=.,1;transl_table=11 PYKI01003086.1 Genbank gene 318 605 . + . ID=gene-C9F07_30900;Name=C9F07_30900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30900 PYKI01003086.1 Protein Homology CDS 318 605 . + 0 ID=cds-TGD40089.1;Parent=gene-C9F07_30900;Dbxref=NCBI_GP:TGD40089.1;Name=TGD40089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458610.1;locus_tag=C9F07_30900;product=spore gernimation protein GerE;protein_id=TGD40089.1;transl_table=11 PYKI01003086.1 Genbank gene 598 780 . - . ID=gene-C9F07_30905;Name=C9F07_30905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30905 PYKI01003086.1 Protein Homology CDS 598 780 . - 0 ID=cds-TGD40090.1;Parent=gene-C9F07_30905;Dbxref=NCBI_GP:TGD40090.1;Name=TGD40090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750926.1;locus_tag=C9F07_30905;product=GTPase;protein_id=TGD40090.1;transl_table=11 ##sequence-region PYKI01002718.1 1 820 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002718.1 Genbank region 1 820 . + . ID=PYKI01002718.1:1..820;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002718.1 Genbank gene 202 765 . + . ID=gene-C9F07_27100;Name=C9F07_27100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27100 PYKI01002718.1 Protein Homology CDS 202 765 . + 0 ID=cds-TGD47793.1;Parent=gene-C9F07_27100;Dbxref=NCBI_GP:TGD47793.1;Name=TGD47793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455396.1;locus_tag=C9F07_27100;product=DNA-binding transcriptional regulator;protein_id=TGD47793.1;transl_table=11 ##sequence-region PYKI01002750.1 1 820 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002750.1 Genbank region 1 820 . + . ID=PYKI01002750.1:1..820;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002750.1 Genbank gene 5 262 . + . ID=gene-C9F07_27460;Name=C9F07_27460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27460 PYKI01002750.1 Protein Homology CDS 5 262 . + 0 ID=cds-TGD46918.1;Parent=gene-C9F07_27460;Dbxref=NCBI_GP:TGD46918.1;Name=TGD46918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396855.1;locus_tag=C9F07_27460;product=DNA-binding protein;protein_id=TGD46918.1;transl_table=11 PYKI01002750.1 Genbank gene 252 734 . + . ID=gene-C9F07_27465;Name=C9F07_27465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27465 PYKI01002750.1 Protein Homology CDS 252 734 . + 0 ID=cds-TGD46917.1;Parent=gene-C9F07_27465;Dbxref=NCBI_GP:TGD46917.1;Name=TGD46917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000834215.1;locus_tag=C9F07_27465;product=hypothetical protein;protein_id=TGD46917.1;transl_table=11 ##sequence-region PYKI01000979.1 1 818 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000979.1 Genbank region 1 818 . + . ID=PYKI01000979.1:1..818;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000979.1 Genbank gene 34 818 . - . ID=gene-C9F07_08925;Name=C9F07_08925;end_range=818,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08925;partial=true PYKI01000979.1 Protein Homology CDS 34 818 . - 2 ID=cds-TGD99628.1;Parent=gene-C9F07_08925;Dbxref=NCBI_GP:TGD99628.1;Name=TGD99628.1;end_range=818,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457958.1;locus_tag=C9F07_08925;partial=true;product=DNA-binding transcriptional regulator CytR;protein_id=TGD99628.1;transl_table=11 ##sequence-region PYKI01001393.1 1 818 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001393.1 Genbank region 1 818 . + . ID=PYKI01001393.1:1..818;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001393.1 Genbank gene 155 670 . - . ID=gene-C9F07_13190;Name=C9F07_13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13190 PYKI01001393.1 Protein Homology CDS 155 670 . - 0 ID=cds-TGD84141.1;Parent=gene-C9F07_13190;Dbxref=NCBI_GP:TGD84141.1;Name=TGD84141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458539.1;locus_tag=C9F07_13190;product=transcriptional regulator Zur;protein_id=TGD84141.1;transl_table=11 ##sequence-region PYKI01000912.1 1 817 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000912.1 Genbank region 1 817 . + . ID=PYKI01000912.1:1..817;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000912.1 Genbank gene 1 210 . + . ID=gene-C9F07_08310;Name=C9F07_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08310;partial=true;start_range=.,1 PYKI01000912.1 Protein Homology CDS 1 210 . + 0 ID=cds-TGE03014.1;Parent=gene-C9F07_08310;Dbxref=NCBI_GP:TGE03014.1;Name=TGE03014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455050.1;locus_tag=C9F07_08310;partial=true;product=hypothetical protein;protein_id=TGE03014.1;start_range=.,1;transl_table=11 PYKI01000912.1 Genbank gene 314 712 . + . ID=gene-C9F07_08315;Name=C9F07_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08315 PYKI01000912.1 Protein Homology CDS 314 712 . + 0 ID=cds-TGE03015.1;Parent=gene-C9F07_08315;Dbxref=NCBI_GP:TGE03015.1;Name=TGE03015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455051.1;locus_tag=C9F07_08315;product=thioesterase;protein_id=TGE03015.1;transl_table=11 ##sequence-region PYKI01002635.1 1 817 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002635.1 Genbank region 1 817 . + . ID=PYKI01002635.1:1..817;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002635.1 Genbank gene 1 583 . - . ID=gene-C9F07_26220;Name=C9F07_26220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26220;partial=true;start_range=.,1 PYKI01002635.1 Protein Homology CDS 1 583 . - 0 ID=cds-TGD49427.1;Parent=gene-C9F07_26220;Dbxref=NCBI_GP:TGD49427.1;Name=TGD49427.1;Note=with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456894.1;locus_tag=C9F07_26220;partial=true;product=amino acid ABC transporter permease;protein_id=TGD49427.1;start_range=.,1;transl_table=11 PYKI01002635.1 Genbank gene 580 817 . - . ID=gene-C9F07_26225;Name=C9F07_26225;end_range=817,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26225;partial=true PYKI01002635.1 Protein Homology CDS 580 817 . - 1 ID=cds-TGD49428.1;Parent=gene-C9F07_26225;Dbxref=NCBI_GP:TGD49428.1;Name=TGD49428.1;Note=with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine;end_range=817,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=C9F07_26225;partial=true;product=amino acid ABC transporter permease;protein_id=TGD49428.1;transl_table=11 ##sequence-region PYKI01001437.1 1 817 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001437.1 Genbank region 1 817 . + . ID=PYKI01001437.1:1..817;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001437.1 Genbank gene 1 266 . - . ID=gene-C9F07_13600;Name=C9F07_13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13600;partial=true;start_range=.,1 PYKI01001437.1 Protein Homology CDS 1 266 . - 0 ID=cds-TGD83697.1;Parent=gene-C9F07_13600;Dbxref=NCBI_GP:TGD83697.1;Name=TGD83697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463348.1;locus_tag=C9F07_13600;partial=true;product=helicase;protein_id=TGD83697.1;start_range=.,1;transl_table=11 PYKI01001437.1 Genbank gene 432 782 . - . ID=gene-C9F07_13605;Name=C9F07_13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13605 PYKI01001437.1 Protein Homology CDS 432 782 . - 0 ID=cds-TGD83698.1;Parent=gene-C9F07_13605;Dbxref=NCBI_GP:TGD83698.1;Name=TGD83698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219563.1;locus_tag=C9F07_13605;product=integrase;protein_id=TGD83698.1;transl_table=11 ##sequence-region PYKI01001701.1 1 816 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001701.1 Genbank region 1 816 . + . ID=PYKI01001701.1:1..816;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001701.1 Genbank pseudogene 96 596 . + . ID=gene-C9F07_16225;Name=C9F07_16225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16225;pseudo=true PYKI01001701.1 Protein Homology CDS 96 596 . + 0 ID=cds-C9F07_16225;Parent=gene-C9F07_16225;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=C9F07_16225;product=multidrug ABC transporter permease/ATP-binding protein;pseudo=true;transl_table=11 PYKI01001701.1 Genbank gene 589 816 . + . ID=gene-C9F07_16230;Name=C9F07_16230;end_range=816,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16230;partial=true PYKI01001701.1 Protein Homology CDS 589 816 . + 0 ID=cds-TGD69392.1;Parent=gene-C9F07_16230;Dbxref=NCBI_GP:TGD69392.1;Name=TGD69392.1;end_range=816,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=C9F07_16230;partial=true;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=TGD69392.1;transl_table=11 ##sequence-region PYKI01000138.1 1 816 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000138.1 Genbank region 1 816 . + . ID=PYKI01000138.1:1..816;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000138.1 Genbank gene 1 107 . + . ID=gene-C9F07_00935;Name=C9F07_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00935;partial=true;start_range=.,1 PYKI01000138.1 Protein Homology CDS 1 107 . + 2 ID=cds-TGE30085.1;Parent=gene-C9F07_00935;Dbxref=NCBI_GP:TGE30085.1;Name=TGE30085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001677061.1;locus_tag=C9F07_00935;partial=true;product=acyl dehydratase;protein_id=TGE30085.1;start_range=.,1;transl_table=11 PYKI01000138.1 Genbank gene 104 816 . + . ID=gene-C9F07_00940;Name=C9F07_00940;end_range=816,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00940;partial=true PYKI01000138.1 Protein Homology CDS 104 816 . + 0 ID=cds-TGE30086.1;Parent=gene-C9F07_00940;Dbxref=NCBI_GP:TGE30086.1;Name=TGE30086.1;end_range=816,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459834.1;locus_tag=C9F07_00940;partial=true;product=acyl-CoA dehydrogenase;protein_id=TGE30086.1;transl_table=11 ##sequence-region PYKI01002134.1 1 816 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002134.1 Genbank region 1 816 . + . ID=PYKI01002134.1:1..816;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002134.1 Genbank pseudogene 79 816 . + . ID=gene-C9F07_20660;Name=C9F07_20660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20660;pseudo=true PYKI01002134.1 Protein Homology CDS 79 816 . + 0 ID=cds-C9F07_20660;Parent=gene-C9F07_20660;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456673.1;locus_tag=C9F07_20660;product=multidrug transporter subunit MdtB;pseudo=true;transl_table=11 ##sequence-region PYKI01002493.1 1 815 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002493.1 Genbank region 1 815 . + . ID=PYKI01002493.1:1..815;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002493.1 Genbank gene 1 121 . - . ID=gene-C9F07_24665;Name=C9F07_24665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24665;partial=true;start_range=.,1 PYKI01002493.1 Protein Homology CDS 1 121 . - 0 ID=cds-TGD50349.1;Parent=gene-C9F07_24665;Dbxref=NCBI_GP:TGD50349.1;Name=TGD50349.1;Note=catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457715.1;locus_tag=C9F07_24665;partial=true;product=N-acetylmannosamine kinase;protein_id=TGD50349.1;start_range=.,1;transl_table=11 PYKI01002493.1 Genbank gene 118 807 . - . ID=gene-C9F07_24670;Name=C9F07_24670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24670 PYKI01002493.1 Protein Homology CDS 118 807 . - 0 ID=cds-TGD50350.1;Parent=gene-C9F07_24670;Dbxref=NCBI_GP:TGD50350.1;Name=TGD50350.1;Note=Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=C9F07_24670;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=TGD50350.1;transl_table=11 ##sequence-region PYKI01002439.1 1 815 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002439.1 Genbank region 1 815 . + . ID=PYKI01002439.1:1..815;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002439.1 Genbank gene 1 811 . + . ID=gene-C9F07_24115;Name=C9F07_24115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24115;partial=true;start_range=.,1 PYKI01002439.1 Protein Homology CDS 1 811 . + 1 ID=cds-TGD51101.1;Parent=gene-C9F07_24115;Dbxref=NCBI_GP:TGD51101.1;Name=TGD51101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=C9F07_24115;partial=true;product=hypothetical protein;protein_id=TGD51101.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002115.1 1 814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002115.1 Genbank region 1 814 . + . ID=PYKI01002115.1:1..814;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002115.1 Genbank gene 1 814 . - . ID=gene-C9F07_20495;Name=C9F07_20495;end_range=814,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20495;partial=true;start_range=.,1 PYKI01002115.1 Protein Homology CDS 1 814 . - 0 ID=cds-TGD58332.1;Parent=gene-C9F07_20495;Dbxref=NCBI_GP:TGD58332.1;Name=TGD58332.1;end_range=814,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=C9F07_20495;partial=true;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=TGD58332.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002959.1 1 814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002959.1 Genbank region 1 814 . + . ID=PYKI01002959.1:1..814;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002959.1 Genbank gene 1 210 . + . ID=gene-C9F07_29645;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=C9F07_29645;partial=true;start_range=.,1 PYKI01002959.1 Protein Homology CDS 1 210 . + 0 ID=cds-TGD41979.1;Parent=gene-C9F07_29645;Dbxref=NCBI_GP:TGD41979.1;Name=TGD41979.1;gbkey=CDS;gene=cas2e;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461858.1;locus_tag=C9F07_29645;partial=true;product=type I-E CRISPR-associated endoribonuclease Cas2;protein_id=TGD41979.1;start_range=.,1;transl_table=11 PYKI01002959.1 Genbank direct_repeat 307 762 . + . ID=id-PYKI01002959.1:307..762;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=307..335;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg ##sequence-region PYKI01001669.1 1 814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001669.1 Genbank region 1 814 . + . ID=PYKI01001669.1:1..814;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001669.1 Genbank pseudogene 111 797 . - . ID=gene-C9F07_15930;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=pseudogene;locus_tag=C9F07_15930;pseudo=true PYKI01001669.1 Protein Homology CDS 111 797 . - 0 ID=cds-C9F07_15930;Parent=gene-C9F07_15930;Note=catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=tyrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457139.1;locus_tag=C9F07_15930;product=bifunctional chorismate mutase/prephenate dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01001387.1 1 814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001387.1 Genbank region 1 814 . + . ID=PYKI01001387.1:1..814;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001387.1 Genbank gene 1 188 . - . ID=gene-C9F07_13045;Name=C9F07_13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13045;partial=true;start_range=.,1 PYKI01001387.1 Protein Homology CDS 1 188 . - 0 ID=cds-TGD84361.1;Parent=gene-C9F07_13045;Dbxref=NCBI_GP:TGD84361.1;Name=TGD84361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455453.1;locus_tag=C9F07_13045;partial=true;product=dimethyl sulfoxide reductase subunit B;protein_id=TGD84361.1;start_range=.,1;transl_table=11 PYKI01001387.1 Genbank gene 199 814 . - . ID=gene-C9F07_13050;Name=C9F07_13050;end_range=814,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13050;partial=true PYKI01001387.1 Protein Homology CDS 199 814 . - 1 ID=cds-TGD84360.1;Parent=gene-C9F07_13050;Dbxref=NCBI_GP:TGD84360.1;Name=TGD84360.1;end_range=814,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455981.1;locus_tag=C9F07_13050;partial=true;product=dimethyl sulfoxide reductase subunit A;protein_id=TGD84360.1;transl_table=11 ##sequence-region PYKI01002358.1 1 814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002358.1 Genbank region 1 814 . + . ID=PYKI01002358.1:1..814;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002358.1 Genbank gene 1 446 . + . ID=gene-C9F07_23185;Name=C9F07_23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23185;partial=true;start_range=.,1 PYKI01002358.1 Protein Homology CDS 1 446 . + 2 ID=cds-TGD53056.1;Parent=gene-C9F07_23185;Dbxref=NCBI_GP:TGD53056.1;Name=TGD53056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=C9F07_23185;partial=true;product=elongation factor P hydroxylase;protein_id=TGD53056.1;start_range=.,1;transl_table=11 PYKI01002358.1 Genbank gene 479 754 . + . ID=gene-C9F07_23190;Name=C9F07_23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23190 PYKI01002358.1 Protein Homology CDS 479 754 . + 0 ID=cds-TGD53057.1;Parent=gene-C9F07_23190;Dbxref=NCBI_GP:TGD53057.1;Name=TGD53057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456922.1;locus_tag=C9F07_23190;product=YfcL family protein;protein_id=TGD53057.1;transl_table=11 ##sequence-region PYKI01000503.1 1 3508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000503.1 Genbank region 1 3508 . + . ID=PYKI01000503.1:1..3508;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000503.1 Genbank pseudogene 62 1429 . + . ID=gene-C9F07_04095;Name=C9F07_04095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04095;pseudo=true PYKI01000503.1 Protein Homology CDS 62 1429 . + 0 ID=cds-C9F07_04095;Parent=gene-C9F07_04095;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454896.1;locus_tag=C9F07_04095;product=type VI secretion system tip protein VgrG;pseudo=true;transl_table=11 PYKI01000503.1 Genbank gene 1453 1899 . + . ID=gene-C9F07_04100;Name=C9F07_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04100 PYKI01000503.1 Protein Homology CDS 1453 1899 . + 0 ID=cds-TGE17235.1;Parent=gene-C9F07_04100;Dbxref=NCBI_GP:TGE17235.1;Name=TGE17235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454897.1;locus_tag=C9F07_04100;product=hypothetical protein;protein_id=TGE17235.1;transl_table=11 PYKI01000503.1 Genbank pseudogene 1918 3411 . + . ID=gene-C9F07_04105;Name=C9F07_04105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04105;pseudo=true PYKI01000503.1 Protein Homology CDS 1918 3411 . + 0 ID=cds-C9F07_04105;Parent=gene-C9F07_04105;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=C9F07_04105;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 ##sequence-region PYKI01001166.1 1 813 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001166.1 Genbank region 1 813 . + . ID=PYKI01001166.1:1..813;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001166.1 Genbank gene 1 813 . - . ID=gene-C9F07_10900;Name=sipA;end_range=813,.;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=C9F07_10900;partial=true;start_range=.,1 PYKI01001166.1 Protein Homology CDS 1 813 . - 0 ID=cds-TGD93180.1;Parent=gene-C9F07_10900;Dbxref=NCBI_GP:TGD93180.1;Name=TGD93180.1;end_range=813,.;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457276.1;locus_tag=C9F07_10900;partial=true;product=SPI-1 type III secretion system effector SipA;protein_id=TGD93180.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002008.1 1 813 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002008.1 Genbank region 1 813 . + . ID=PYKI01002008.1:1..813;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002008.1 Genbank pseudogene 1 704 . + . ID=gene-C9F07_19370;Name=C9F07_19370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19370;pseudo=true PYKI01002008.1 Protein Homology CDS 1 704 . + 2 ID=cds-C9F07_19370;Parent=gene-C9F07_19370;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310726.1;locus_tag=C9F07_19370;product=DNA (cytosine-5-)-methyltransferase;pseudo=true;transl_table=11 PYKI01002008.1 Genbank pseudogene 723 813 . - . ID=gene-C9F07_19375;Name=C9F07_19375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19375;pseudo=true PYKI01002008.1 Protein Homology CDS 723 813 . - 1 ID=cds-C9F07_19375;Parent=gene-C9F07_19375;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456551.1;locus_tag=C9F07_19375;product=DNA-cytosine methyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01000453.1 1 813 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000453.1 Genbank region 1 813 . + . ID=PYKI01000453.1:1..813;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000453.1 Genbank gene 1 300 . + . ID=gene-C9F07_03515;Name=C9F07_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03515;partial=true;start_range=.,1 PYKI01000453.1 Protein Homology CDS 1 300 . + 0 ID=cds-TGE19974.1;Parent=gene-C9F07_03515;Dbxref=NCBI_GP:TGE19974.1;Name=TGE19974.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457596.1;locus_tag=C9F07_03515;partial=true;product=undecaprenyl-diphosphatase;protein_id=TGE19974.1;start_range=.,1;transl_table=11 PYKI01000453.1 Genbank gene 404 813 . - . ID=gene-C9F07_03520;Name=C9F07_03520;end_range=813,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03520;partial=true PYKI01000453.1 Protein Homology CDS 404 813 . - 2 ID=cds-TGE19973.1;Parent=gene-C9F07_03520;Dbxref=NCBI_GP:TGE19973.1;Name=TGE19973.1;end_range=813,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=C9F07_03520;partial=true;product=multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase;protein_id=TGE19973.1;transl_table=11 ##sequence-region PYKI01002413.1 1 813 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002413.1 Genbank region 1 813 . + . ID=PYKI01002413.1:1..813;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002413.1 Genbank gene 1 528 . + . ID=gene-C9F07_23855;Name=C9F07_23855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23855;partial=true;start_range=.,1 PYKI01002413.1 Protein Homology CDS 1 528 . + 0 ID=cds-TGD51644.1;Parent=gene-C9F07_23855;Dbxref=NCBI_GP:TGD51644.1;Name=TGD51644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456965.1;locus_tag=C9F07_23855;partial=true;product=cell division protein ZipA;protein_id=TGD51644.1;start_range=.,1;transl_table=11 PYKI01002413.1 Genbank gene 600 813 . + . ID=gene-C9F07_23860;Name=ligA;end_range=813,.;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=C9F07_23860;partial=true PYKI01002413.1 Protein Homology CDS 600 813 . + 0 ID=cds-TGD51645.1;Parent=gene-C9F07_23860;Dbxref=NCBI_GP:TGD51645.1;Name=TGD51645.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;end_range=813,.;gbkey=CDS;gene=ligA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=C9F07_23860;partial=true;product=DNA ligase;protein_id=TGD51645.1;transl_table=11 ##sequence-region PYKI01002031.1 1 812 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002031.1 Genbank region 1 812 . + . ID=PYKI01002031.1:1..812;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002031.1 Genbank gene 11 700 . - . ID=gene-C9F07_19625;Name=C9F07_19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19625 PYKI01002031.1 Protein Homology CDS 11 700 . - 0 ID=cds-TGD60027.1;Parent=gene-C9F07_19625;Dbxref=NCBI_GP:TGD60027.1;Name=TGD60027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=C9F07_19625;product=ethanolamine utilization acetate kinase EutQ;protein_id=TGD60027.1;transl_table=11 ##sequence-region PYKI01001302.1 1 811 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001302.1 Genbank region 1 811 . + . ID=PYKI01001302.1:1..811;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001302.1 Genbank pseudogene 43 243 . - . ID=gene-C9F07_12200;Name=C9F07_12200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12200;pseudo=true PYKI01001302.1 Protein Homology CDS 43 243 . - 0 ID=cds-C9F07_12200;Parent=gene-C9F07_12200;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456887.1;locus_tag=C9F07_12200;product=LacI family transcriptional regulator;pseudo=true;transl_table=11 PYKI01001302.1 Genbank gene 324 497 . - . ID=gene-C9F07_12205;Name=C9F07_12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12205 PYKI01001302.1 Protein Homology CDS 324 497 . - 0 ID=cds-TGD87093.1;Parent=gene-C9F07_12205;Dbxref=NCBI_GP:TGD87093.1;Name=TGD87093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991991.1;locus_tag=C9F07_12205;product=hypothetical protein;protein_id=TGD87093.1;transl_table=11 PYKI01001302.1 Genbank gene 496 811 . + . ID=gene-C9F07_12210;Name=C9F07_12210;end_range=811,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12210;partial=true PYKI01001302.1 Protein Homology CDS 496 811 . + 0 ID=cds-TGD87094.1;Parent=gene-C9F07_12210;Dbxref=NCBI_GP:TGD87094.1;Name=TGD87094.1;end_range=811,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456886.1;locus_tag=C9F07_12210;partial=true;product=PTS ascorbate transporter subunit IIA;protein_id=TGD87094.1;transl_table=11 ##sequence-region PYKI01001977.1 1 811 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001977.1 Genbank region 1 811 . + . ID=PYKI01001977.1:1..811;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001977.1 Genbank gene 1 208 . - . ID=gene-C9F07_19060;Name=C9F07_19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19060;partial=true;start_range=.,1 PYKI01001977.1 Protein Homology CDS 1 208 . - 0 ID=cds-TGD60265.1;Parent=gene-C9F07_19060;Dbxref=NCBI_GP:TGD60265.1;Name=TGD60265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=C9F07_19060;partial=true;product=LysR family transcriptional regulator;protein_id=TGD60265.1;start_range=.,1;transl_table=11 PYKI01001977.1 Genbank gene 224 811 . - . ID=gene-C9F07_19065;Name=C9F07_19065;end_range=811,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19065;partial=true PYKI01001977.1 Protein Homology CDS 224 811 . - 0 ID=cds-TGD60266.1;Parent=gene-C9F07_19065;Dbxref=NCBI_GP:TGD60266.1;Name=TGD60266.1;end_range=811,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458441.1;locus_tag=C9F07_19065;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGD60266.1;transl_table=11 ##sequence-region PYKI01001817.1 1 810 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001817.1 Genbank region 1 810 . + . ID=PYKI01001817.1:1..810;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001817.1 Genbank gene 1 247 . + . ID=gene-C9F07_17465;Name=C9F07_17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17465;partial=true;start_range=.,1 PYKI01001817.1 Protein Homology CDS 1 247 . + 1 ID=cds-TGD64883.1;Parent=gene-C9F07_17465;Dbxref=NCBI_GP:TGD64883.1;Name=TGD64883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456696.1;locus_tag=C9F07_17465;partial=true;product=U32 family peptidase;protein_id=TGD64883.1;start_range=.,1;transl_table=11 PYKI01001817.1 Genbank gene 698 810 . + . ID=gene-C9F07_17470;Name=C9F07_17470;end_range=810,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17470;partial=true PYKI01001817.1 Protein Homology CDS 698 810 . + 0 ID=cds-TGD64884.1;Parent=gene-C9F07_17470;Dbxref=NCBI_GP:TGD64884.1;Name=TGD64884.1;end_range=810,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=C9F07_17470;partial=true;product=non-LEE encoded effector protein NleB;protein_id=TGD64884.1;transl_table=11 ##sequence-region PYKI01001252.1 1 3498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001252.1 Genbank region 1 3498 . + . ID=PYKI01001252.1:1..3498;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001252.1 Genbank gene 1 2434 . - . ID=gene-C9F07_11685;Name=C9F07_11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11685;partial=true;start_range=.,1 PYKI01001252.1 Protein Homology CDS 1 2434 . - 0 ID=cds-TGD89598.1;Parent=gene-C9F07_11685;Dbxref=NCBI_GP:TGD89598.1;Name=TGD89598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=C9F07_11685;partial=true;product=fimbrial assembly protein;protein_id=TGD89598.1;start_range=.,1;transl_table=11 PYKI01001252.1 Genbank gene 2418 3179 . - . ID=gene-C9F07_11690;Name=C9F07_11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11690 PYKI01001252.1 Protein Homology CDS 2418 3179 . - 0 ID=cds-TGD89599.1;Parent=gene-C9F07_11690;Dbxref=NCBI_GP:TGD89599.1;Name=TGD89599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454939.1;locus_tag=C9F07_11690;product=fimbrial chaperone protein StbB;protein_id=TGD89599.1;transl_table=11 PYKI01001252.1 Genbank gene 3247 3498 . - . ID=gene-C9F07_11695;Name=C9F07_11695;end_range=3498,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11695;partial=true PYKI01001252.1 Protein Homology CDS 3247 3498 . - 0 ID=cds-TGD89600.1;Parent=gene-C9F07_11695;Dbxref=NCBI_GP:TGD89600.1;Name=TGD89600.1;end_range=3498,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454940.1;locus_tag=C9F07_11695;partial=true;product=type 1 fimbrial protein;protein_id=TGD89600.1;transl_table=11 ##sequence-region PYKI01003013.1 1 809 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003013.1 Genbank region 1 809 . + . ID=PYKI01003013.1:1..809;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003013.1 Genbank gene 1 213 . - . ID=gene-C9F07_30205;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=C9F07_30205;partial=true;start_range=.,1 PYKI01003013.1 Protein Homology CDS 1 213 . - 0 ID=cds-TGD41177.1;Parent=gene-C9F07_30205;Dbxref=NCBI_GP:TGD41177.1;Name=TGD41177.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455082.1;locus_tag=C9F07_30205;partial=true;product=recombination protein RecR;protein_id=TGD41177.1;start_range=.,1;transl_table=11 PYKI01003013.1 Genbank gene 213 542 . - . ID=gene-C9F07_30210;Name=C9F07_30210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30210 PYKI01003013.1 Protein Homology CDS 213 542 . - 0 ID=cds-TGD41178.1;Parent=gene-C9F07_30210;Dbxref=NCBI_GP:TGD41178.1;Name=TGD41178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=C9F07_30210;product=YbaB/EbfC family nucleoid-associated protein;protein_id=TGD41178.1;transl_table=11 PYKI01003013.1 Genbank gene 588 809 . - . ID=gene-C9F07_30215;Name=C9F07_30215;end_range=809,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30215;partial=true PYKI01003013.1 Protein Homology CDS 588 809 . - 0 ID=cds-TGD41179.1;Parent=gene-C9F07_30215;Dbxref=NCBI_GP:TGD41179.1;Name=TGD41179.1;end_range=809,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415003.1;locus_tag=C9F07_30215;partial=true;product=hypothetical protein;protein_id=TGD41179.1;transl_table=11 ##sequence-region PYKI01003466.1 1 807 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003466.1 Genbank region 1 807 . + . ID=PYKI01003466.1:1..807;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003466.1 Genbank gene 1 732 . - . ID=gene-C9F07_34850;Name=C9F07_34850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34850;partial=true;start_range=.,1 PYKI01003466.1 Protein Homology CDS 1 732 . - 0 ID=cds-TGD32913.1;Parent=gene-C9F07_34850;Dbxref=NCBI_GP:TGD32913.1;Name=TGD32913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457210.1;locus_tag=C9F07_34850;partial=true;product=MFS transporter;protein_id=TGD32913.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001712.1 1 806 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001712.1 Genbank region 1 806 . + . ID=PYKI01001712.1:1..806;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001712.1 Genbank gene 1 806 . - . ID=gene-C9F07_16350;Name=C9F07_16350;end_range=806,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16350;partial=true;start_range=.,1 PYKI01001712.1 Protein Homology CDS 1 806 . - 1 ID=cds-TGD69109.1;Parent=gene-C9F07_16350;Dbxref=NCBI_GP:TGD69109.1;Name=TGD69109.1;Note=activates sgrS under glucose-phosphate stress conditions;end_range=806,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454721.1;locus_tag=C9F07_16350;partial=true;product=transcriptional regulator SgrR;protein_id=TGD69109.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002219.1 1 806 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002219.1 Genbank region 1 806 . + . ID=PYKI01002219.1:1..806;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002219.1 Genbank gene 1 708 . - . ID=gene-C9F07_21640;Name=C9F07_21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21640;partial=true;start_range=.,1 PYKI01002219.1 Protein Homology CDS 1 708 . - 0 ID=cds-TGD56468.1;Parent=gene-C9F07_21640;Dbxref=NCBI_GP:TGD56468.1;Name=TGD56468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455979.1;locus_tag=C9F07_21640;partial=true;product=YnfC family lipoprotein;protein_id=TGD56468.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003055.1 1 806 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003055.1 Genbank region 1 806 . + . ID=PYKI01003055.1:1..806;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003055.1 Genbank gene 1 482 . + . ID=gene-C9F07_30635;Name=C9F07_30635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30635;partial=true;start_range=.,1 PYKI01003055.1 Protein Homology CDS 1 482 . + 2 ID=cds-TGD40986.1;Parent=gene-C9F07_30635;Dbxref=NCBI_GP:TGD40986.1;Name=TGD40986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=C9F07_30635;partial=true;product=hypothetical protein;protein_id=TGD40986.1;start_range=.,1;transl_table=11 PYKI01003055.1 Genbank pseudogene 522 806 . + . ID=gene-C9F07_30640;Name=C9F07_30640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30640;pseudo=true PYKI01003055.1 Protein Homology CDS 522 806 . + 0 ID=cds-C9F07_30640;Parent=gene-C9F07_30640;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457305.1;locus_tag=C9F07_30640;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003097.1 1 805 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003097.1 Genbank region 1 805 . + . ID=PYKI01003097.1:1..805;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003097.1 Genbank gene 55 805 . - . ID=gene-C9F07_30990;Name=C9F07_30990;end_range=805,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30990;partial=true PYKI01003097.1 Protein Homology CDS 55 805 . - 1 ID=cds-TGD39806.1;Parent=gene-C9F07_30990;Dbxref=NCBI_GP:TGD39806.1;Name=TGD39806.1;end_range=805,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456910.1;locus_tag=C9F07_30990;partial=true;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=TGD39806.1;transl_table=11 ##sequence-region PYKI01002191.1 1 805 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002191.1 Genbank region 1 805 . + . ID=PYKI01002191.1:1..805;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002191.1 Genbank pseudogene 1 774 . + . ID=gene-C9F07_21310;Name=C9F07_21310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21310;pseudo=true PYKI01002191.1 Protein Homology CDS 1 774 . + 0 ID=cds-C9F07_21310;Parent=gene-C9F07_21310;Note=Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457404.1;locus_tag=C9F07_21310;product=bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-ACP synthetase;pseudo=true;transl_table=11 ##sequence-region PYKI01003426.1 1 805 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003426.1 Genbank region 1 805 . + . ID=PYKI01003426.1:1..805;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003426.1 Genbank pseudogene 1 734 . - . ID=gene-C9F07_34440;Name=C9F07_34440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34440;pseudo=true PYKI01003426.1 Protein Homology CDS 1 734 . - 0 ID=cds-C9F07_34440;Parent=gene-C9F07_34440;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462495.1;locus_tag=C9F07_34440;product=oligopeptidase A;pseudo=true;transl_table=11 ##sequence-region PYKI01000790.1 1 805 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000790.1 Genbank region 1 805 . + . ID=PYKI01000790.1:1..805;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000790.1 Genbank pseudogene 1 491 . + . ID=gene-C9F07_07110;Name=C9F07_07110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07110;pseudo=true PYKI01000790.1 Protein Homology CDS 1 491 . + 2 ID=cds-C9F07_07110;Parent=gene-C9F07_07110;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458530.1;locus_tag=C9F07_07110;product=maltose operon protein MalM;pseudo=true;transl_table=11 ##sequence-region PYKI01003441.1 1 3496 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003441.1 Genbank region 1 3496 . + . ID=PYKI01003441.1:1..3496;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003441.1 Genbank pseudogene 21 218 . - . ID=gene-C9F07_34595;Name=C9F07_34595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34595;pseudo=true PYKI01003441.1 Protein Homology CDS 21 218 . - 0 ID=cds-C9F07_34595;Parent=gene-C9F07_34595;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000902362.1;locus_tag=C9F07_34595;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01003441.1 Genbank gene 274 693 . + . ID=gene-C9F07_34600;Name=C9F07_34600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34600 PYKI01003441.1 Protein Homology CDS 274 693 . + 0 ID=cds-TGD33430.1;Parent=gene-C9F07_34600;Dbxref=NCBI_GP:TGD33430.1;Name=TGD33430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=C9F07_34600;product=thioredoxin TrxC;protein_id=TGD33430.1;transl_table=11 PYKI01003441.1 Genbank gene 766 1446 . + . ID=gene-C9F07_34605;Name=C9F07_34605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34605 PYKI01003441.1 Protein Homology CDS 766 1446 . + 0 ID=cds-TGD33431.1;Parent=gene-C9F07_34605;Dbxref=NCBI_GP:TGD33431.1;Name=TGD33431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=C9F07_34605;product=DTW domain-containing protein;protein_id=TGD33431.1;transl_table=11 PYKI01003441.1 Genbank gene 1500 3496 . + . ID=gene-C9F07_34610;Name=pat;end_range=3496,.;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=C9F07_34610;partial=true PYKI01003441.1 Protein Homology CDS 1500 3496 . + 0 ID=cds-TGD33432.1;Parent=gene-C9F07_34610;Dbxref=NCBI_GP:TGD33432.1;Name=TGD33432.1;end_range=3496,.;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=C9F07_34610;partial=true;product=protein lysine acetyltransferase;protein_id=TGD33432.1;transl_table=11 ##sequence-region PYKI01001589.1 1 805 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001589.1 Genbank region 1 805 . + . ID=PYKI01001589.1:1..805;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001589.1 Genbank gene 1 550 . - . ID=gene-C9F07_15185;Name=C9F07_15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15185;partial=true;start_range=.,1 PYKI01001589.1 Protein Homology CDS 1 550 . - 0 ID=cds-TGD72277.1;Parent=gene-C9F07_15185;Dbxref=NCBI_GP:TGD72277.1;Name=TGD72277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455429.1;locus_tag=C9F07_15185;partial=true;product=ATP-dependent endonuclease;protein_id=TGD72277.1;start_range=.,1;transl_table=11 PYKI01001589.1 Genbank pseudogene 586 773 . - . ID=gene-C9F07_15190;Name=C9F07_15190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15190;pseudo=true PYKI01001589.1 Protein Homology CDS 586 773 . - 0 ID=cds-C9F07_15190;Parent=gene-C9F07_15190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218990.1;locus_tag=C9F07_15190;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001623.1 1 804 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001623.1 Genbank region 1 804 . + . ID=PYKI01001623.1:1..804;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001623.1 Genbank gene 1 647 . - . ID=gene-C9F07_15475;Name=C9F07_15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15475;partial=true;start_range=.,1 PYKI01001623.1 Protein Homology CDS 1 647 . - 0 ID=cds-TGD70635.1;Parent=gene-C9F07_15475;Dbxref=NCBI_GP:TGD70635.1;Name=TGD70635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455839.1;locus_tag=C9F07_15475;partial=true;product=hypothetical protein;protein_id=TGD70635.1;start_range=.,1;transl_table=11 PYKI01001623.1 Genbank gene 691 804 . + . ID=gene-C9F07_15480;Name=C9F07_15480;end_range=804,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15480;partial=true PYKI01001623.1 Protein Homology CDS 691 804 . + 0 ID=cds-TGD70636.1;Parent=gene-C9F07_15480;Dbxref=NCBI_GP:TGD70636.1;Name=TGD70636.1;end_range=804,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455840.1;locus_tag=C9F07_15480;partial=true;product=XRE family transcriptional regulator;protein_id=TGD70636.1;transl_table=11 ##sequence-region PYKI01000395.1 1 804 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000395.1 Genbank region 1 804 . + . ID=PYKI01000395.1:1..804;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000395.1 Genbank pseudogene 1 741 . - . ID=gene-C9F07_03000;Name=C9F07_03000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03000;pseudo=true PYKI01000395.1 Protein Homology CDS 1 741 . - 0 ID=cds-C9F07_03000;Parent=gene-C9F07_03000;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=C9F07_03000;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;pseudo=true;transl_table=11 ##sequence-region PYKI01002923.1 1 804 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002923.1 Genbank region 1 804 . + . ID=PYKI01002923.1:1..804;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002923.1 Genbank gene 1 417 . + . ID=gene-C9F07_29305;Name=C9F07_29305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29305;partial=true;start_range=.,1 PYKI01002923.1 Protein Homology CDS 1 417 . + 0 ID=cds-TGD43107.1;Parent=gene-C9F07_29305;Dbxref=NCBI_GP:TGD43107.1;Name=TGD43107.1;Note=Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=C9F07_29305;partial=true;product=phosphoheptose isomerase;protein_id=TGD43107.1;start_range=.,1;transl_table=11 PYKI01002923.1 Genbank pseudogene 427 747 . + . ID=gene-C9F07_29310;Name=C9F07_29310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29310;pseudo=true PYKI01002923.1 Protein Homology CDS 427 747 . + 0 ID=cds-C9F07_29310;Parent=gene-C9F07_29310;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457651.1;locus_tag=C9F07_29310;product=osmotically-inducible protein OsmY;pseudo=true;transl_table=11 ##sequence-region PYKI01001600.1 1 803 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001600.1 Genbank region 1 803 . + . ID=PYKI01001600.1:1..803;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001600.1 Genbank gene 1 139 . + . ID=gene-C9F07_15275;Name=C9F07_15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15275;partial=true;start_range=.,1 PYKI01001600.1 Protein Homology CDS 1 139 . + 1 ID=cds-TGD71460.1;Parent=gene-C9F07_15275;Dbxref=NCBI_GP:TGD71460.1;Name=TGD71460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=C9F07_15275;partial=true;product=hypothetical protein;protein_id=TGD71460.1;start_range=.,1;transl_table=11 PYKI01001600.1 Genbank pseudogene 90 794 . + . ID=gene-C9F07_15280;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=pseudogene;locus_tag=C9F07_15280;pseudo=true PYKI01001600.1 Protein Homology CDS 90 794 . + 0 ID=cds-C9F07_15280;Parent=gene-C9F07_15280;Note=internal stop;gbkey=CDS;gene=cybH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=C9F07_15280;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;pseudo=true;transl_table=11 ##sequence-region PYKI01001563.1 1 803 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001563.1 Genbank region 1 803 . + . ID=PYKI01001563.1:1..803;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001563.1 Genbank pseudogene 93 803 . - . ID=gene-C9F07_14965;Name=C9F07_14965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14965;pseudo=true PYKI01001563.1 Protein Homology CDS 93 803 . - 0 ID=cds-C9F07_14965;Parent=gene-C9F07_14965;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457095.1;locus_tag=C9F07_14965;product=phosphoribosylformylglycinamidine synthase;pseudo=true;transl_table=11 ##sequence-region PYKI01001400.1 1 803 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001400.1 Genbank region 1 803 . + . ID=PYKI01001400.1:1..803;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001400.1 Genbank gene 74 478 . - . ID=gene-C9F07_13260;Name=C9F07_13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13260 PYKI01001400.1 Protein Homology CDS 74 478 . - 0 ID=cds-TGD83971.1;Parent=gene-C9F07_13260;Dbxref=NCBI_GP:TGD83971.1;Name=TGD83971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454853.1;locus_tag=C9F07_13260;product=Rcs stress response system protein RcsF;protein_id=TGD83971.1;transl_table=11 PYKI01001400.1 Genbank gene 597 803 . - . ID=gene-C9F07_13265;Name=metQ;end_range=803,.;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=C9F07_13265;partial=true PYKI01001400.1 Protein Homology CDS 597 803 . - 0 ID=cds-TGD83972.1;Parent=gene-C9F07_13265;Dbxref=NCBI_GP:TGD83972.1;Name=TGD83972.1;end_range=803,.;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454854.1;locus_tag=C9F07_13265;partial=true;product=methionine ABC transporter substrate-binding protein MetQ;protein_id=TGD83972.1;transl_table=11 ##sequence-region PYKI01003463.1 1 802 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003463.1 Genbank region 1 802 . + . ID=PYKI01003463.1:1..802;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003463.1 Genbank gene 1 484 . + . ID=gene-C9F07_34815;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=C9F07_34815;partial=true;start_range=.,1 PYKI01003463.1 Protein Homology CDS 1 484 . + 1 ID=cds-TGD32924.1;Parent=gene-C9F07_34815;Dbxref=NCBI_GP:TGD32924.1;Name=TGD32924.1;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;gbkey=CDS;gene=glgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=C9F07_34815;partial=true;product=starch synthase;protein_id=TGD32924.1;start_range=.,1;transl_table=11 PYKI01003463.1 Genbank pseudogene 504 782 . + . ID=gene-C9F07_34820;Name=C9F07_34820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34820;pseudo=true PYKI01003463.1 Protein Homology CDS 504 782 . + 0 ID=cds-C9F07_34820;Parent=gene-C9F07_34820;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=C9F07_34820;product=glycogen phosphorylase;pseudo=true;transl_table=11 ##sequence-region PYKI01003126.1 1 801 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003126.1 Genbank region 1 801 . + . ID=PYKI01003126.1:1..801;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003126.1 Genbank gene 1 801 . - . ID=gene-C9F07_31305;Name=C9F07_31305;end_range=801,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31305;partial=true;start_range=.,1 PYKI01003126.1 Protein Homology CDS 1 801 . - 2 ID=cds-TGD39147.1;Parent=gene-C9F07_31305;Dbxref=NCBI_GP:TGD39147.1;Name=TGD39147.1;Note=constitutive%3B catalyzes the formation of cadaverine from lysine;end_range=801,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295383.1;locus_tag=C9F07_31305;partial=true;product=lysine decarboxylase LdcC;protein_id=TGD39147.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003394.1 1 801 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003394.1 Genbank region 1 801 . + . ID=PYKI01003394.1:1..801;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003394.1 Genbank gene 1 801 . + . ID=gene-C9F07_34135;Name=C9F07_34135;end_range=801,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34135;partial=true;start_range=.,1 PYKI01003394.1 Protein Homology CDS 1 801 . + 2 ID=cds-TGD34021.1;Parent=gene-C9F07_34135;Dbxref=NCBI_GP:TGD34021.1;Name=TGD34021.1;end_range=801,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=C9F07_34135;partial=true;product=type VI secretion system protein TssL;protein_id=TGD34021.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000764.1 1 3486 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000764.1 Genbank region 1 3486 . + . ID=PYKI01000764.1:1..3486;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000764.1 Genbank gene 1 745 . - . ID=gene-C9F07_06740;Name=C9F07_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06740;partial=true;start_range=.,1 PYKI01000764.1 Protein Homology CDS 1 745 . - 0 ID=cds-TGE09238.1;Parent=gene-C9F07_06740;Dbxref=NCBI_GP:TGE09238.1;Name=TGE09238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455293.1;locus_tag=C9F07_06740;partial=true;product=hypothetical protein;protein_id=TGE09238.1;start_range=.,1;transl_table=11 PYKI01000764.1 Genbank pseudogene 760 3462 . - . ID=gene-C9F07_06745;Name=C9F07_06745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06745;pseudo=true PYKI01000764.1 Protein Homology CDS 760 3462 . - 0 ID=cds-C9F07_06745;Parent=gene-C9F07_06745;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455292.1;locus_tag=C9F07_06745;product=2-oxoglutarate dehydrogenase E1 component;pseudo=true;transl_table=11 ##sequence-region PYKI01003332.1 1 801 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003332.1 Genbank region 1 801 . + . ID=PYKI01003332.1:1..801;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003332.1 Genbank gene 1 391 . + . ID=gene-C9F07_33520;Name=C9F07_33520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33520;partial=true;start_range=.,1 PYKI01003332.1 Protein Homology CDS 1 391 . + 1 ID=cds-TGD35103.1;Parent=gene-C9F07_33520;Dbxref=NCBI_GP:TGD35103.1;Name=TGD35103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457369.1;locus_tag=C9F07_33520;partial=true;product=fuculose phosphate aldolase;protein_id=TGD35103.1;start_range=.,1;transl_table=11 PYKI01003332.1 Genbank gene 408 801 . + . ID=gene-C9F07_33525;Name=C9F07_33525;end_range=801,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33525;partial=true PYKI01003332.1 Protein Homology CDS 408 801 . + 0 ID=cds-TGD35104.1;Parent=gene-C9F07_33525;Dbxref=NCBI_GP:TGD35104.1;Name=TGD35104.1;end_range=801,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=C9F07_33525;partial=true;product=hypothetical protein;protein_id=TGD35104.1;transl_table=11 ##sequence-region PYKI01000388.1 1 801 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000388.1 Genbank region 1 801 . + . ID=PYKI01000388.1:1..801;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000388.1 Genbank gene 1 204 . + . ID=gene-C9F07_02935;Name=C9F07_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02935;partial=true;start_range=.,1 PYKI01000388.1 Protein Homology CDS 1 204 . + 0 ID=cds-TGE22783.1;Parent=gene-C9F07_02935;Dbxref=NCBI_GP:TGE22783.1;Name=TGE22783.1;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=C9F07_02935;partial=true;product=galactokinase;protein_id=TGE22783.1;start_range=.,1;transl_table=11 PYKI01000388.1 Genbank gene 198 801 . + . ID=gene-C9F07_02940;Name=galM;end_range=801,.;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=C9F07_02940;partial=true PYKI01000388.1 Protein Homology CDS 198 801 . + 0 ID=cds-TGE22784.1;Parent=gene-C9F07_02940;Dbxref=NCBI_GP:TGE22784.1;Name=TGE22784.1;Note=mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose;end_range=801,.;gbkey=CDS;gene=galM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455315.1;locus_tag=C9F07_02940;partial=true;product=galactose-1-epimerase;protein_id=TGE22784.1;transl_table=11 ##sequence-region PYKI01001161.1 1 801 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001161.1 Genbank region 1 801 . + . ID=PYKI01001161.1:1..801;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001161.1 Genbank gene 1 747 . + . ID=gene-C9F07_10860;Name=C9F07_10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10860;partial=true;start_range=.,1 PYKI01001161.1 Protein Homology CDS 1 747 . + 0 ID=cds-TGD93289.1;Parent=gene-C9F07_10860;Dbxref=NCBI_GP:TGD93289.1;Name=TGD93289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459657.1;locus_tag=C9F07_10860;partial=true;product=glutamate/aspartate ABC transporter substrate-binding protein;protein_id=TGD93289.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001261.1 1 800 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001261.1 Genbank region 1 800 . + . ID=PYKI01001261.1:1..800;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001261.1 Genbank gene 1 561 . + . ID=gene-C9F07_11775;Name=C9F07_11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11775;partial=true;start_range=.,1 PYKI01001261.1 Protein Homology CDS 1 561 . + 0 ID=cds-TGD89438.1;Parent=gene-C9F07_11775;Dbxref=NCBI_GP:TGD89438.1;Name=TGD89438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456066.1;locus_tag=C9F07_11775;partial=true;product=hypothetical protein;protein_id=TGD89438.1;start_range=.,1;transl_table=11 PYKI01001261.1 Genbank gene 619 800 . - . ID=gene-C9F07_11780;Name=C9F07_11780;end_range=800,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11780;partial=true PYKI01001261.1 Protein Homology CDS 619 800 . - 2 ID=cds-TGD89439.1;Parent=gene-C9F07_11780;Dbxref=NCBI_GP:TGD89439.1;Name=TGD89439.1;Note=regulates malXY which are involved in maltose-glucose transport;end_range=800,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132499.1;locus_tag=C9F07_11780;partial=true;product=Mal regulon transcriptional regulator MalI;protein_id=TGD89439.1;transl_table=11 ##sequence-region PYKI01001395.1 1 781 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001395.1 Genbank region 1 781 . + . ID=PYKI01001395.1:1..781;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001395.1 Genbank gene 1 781 . - . ID=gene-C9F07_13200;Name=C9F07_13200;end_range=781,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13200;partial=true;start_range=.,1 PYKI01001395.1 Protein Homology CDS 1 781 . - 1 ID=cds-TGD84137.1;Parent=gene-C9F07_13200;Dbxref=NCBI_GP:TGD84137.1;Name=TGD84137.1;end_range=781,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=C9F07_13200;partial=true;product=flotillin;protein_id=TGD84137.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001394.1 1 799 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001394.1 Genbank region 1 799 . + . ID=PYKI01001394.1:1..799;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001394.1 Genbank gene 211 799 . + . ID=gene-C9F07_13195;Name=C9F07_13195;end_range=799,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13195;partial=true PYKI01001394.1 Protein Homology CDS 211 799 . + 0 ID=cds-TGD84139.1;Parent=gene-C9F07_13195;Dbxref=NCBI_GP:TGD84139.1;Name=TGD84139.1;end_range=799,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456210.1;locus_tag=C9F07_13195;partial=true;product=exodeoxyribonuclease III;protein_id=TGD84139.1;transl_table=11 ##sequence-region PYKI01003351.1 1 798 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003351.1 Genbank region 1 798 . + . ID=PYKI01003351.1:1..798;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003351.1 Genbank gene 1 798 . - . ID=gene-C9F07_33755;Name=lamB;end_range=798,.;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=C9F07_33755;partial=true;start_range=.,1 PYKI01003351.1 Protein Homology CDS 1 798 . - 0 ID=cds-TGD35023.1;Parent=gene-C9F07_33755;Dbxref=NCBI_GP:TGD35023.1;Name=TGD35023.1;Note=porin involved in the transport of maltose and maltodextrins;end_range=798,.;gbkey=CDS;gene=lamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458529.1;locus_tag=C9F07_33755;partial=true;product=maltoporin;protein_id=TGD35023.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001661.1 1 798 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001661.1 Genbank region 1 798 . + . ID=PYKI01001661.1:1..798;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001661.1 Genbank gene 83 493 . - . ID=gene-C9F07_15865;Name=C9F07_15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15865 PYKI01001661.1 Protein Homology CDS 83 493 . - 0 ID=cds-TGD70169.1;Parent=gene-C9F07_15865;Dbxref=NCBI_GP:TGD70169.1;Name=TGD70169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455861.1;locus_tag=C9F07_15865;product=aldehyde-activating protein;protein_id=TGD70169.1;transl_table=11 PYKI01001661.1 Genbank pseudogene 637 729 . - . ID=gene-C9F07_15870;Name=C9F07_15870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15870;pseudo=true PYKI01001661.1 Protein Homology CDS 637 729 . - 0 ID=cds-C9F07_15870;Parent=gene-C9F07_15870;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455860.1;locus_tag=C9F07_15870;product=DUF1318 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000807.1 1 797 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000807.1 Genbank region 1 797 . + . ID=PYKI01000807.1:1..797;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000807.1 Genbank gene 194 797 . + . ID=gene-C9F07_07270;Name=manA;end_range=797,.;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=C9F07_07270;partial=true PYKI01000807.1 Protein Homology CDS 194 797 . + 0 ID=cds-TGE09128.1;Parent=gene-C9F07_07270;Dbxref=NCBI_GP:TGE09128.1;Name=TGE09128.1;end_range=797,.;gbkey=CDS;gene=manA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456065.1;locus_tag=C9F07_07270;partial=true;product=mannose-6-phosphate isomerase%2C class I;protein_id=TGE09128.1;transl_table=11 ##sequence-region PYKI01002648.1 1 797 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002648.1 Genbank region 1 797 . + . ID=PYKI01002648.1:1..797;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002648.1 Genbank gene 85 276 . + . ID=gene-C9F07_26365;Name=C9F07_26365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26365 PYKI01002648.1 Protein Homology CDS 85 276 . + 0 ID=cds-TGD49378.1;Parent=gene-C9F07_26365;Dbxref=NCBI_GP:TGD49378.1;Name=TGD49378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131224.1;locus_tag=C9F07_26365;product=hypothetical protein;protein_id=TGD49378.1;transl_table=11 PYKI01002648.1 Genbank gene 277 797 . + . ID=gene-C9F07_26370;Name=C9F07_26370;end_range=797,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26370;partial=true PYKI01002648.1 Protein Homology CDS 277 797 . + 0 ID=cds-TGD49377.1;Parent=gene-C9F07_26370;Dbxref=NCBI_GP:TGD49377.1;Name=TGD49377.1;end_range=797,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=C9F07_26370;partial=true;product=lytic transglycosylase F;protein_id=TGD49377.1;transl_table=11 ##sequence-region PYKI01002543.1 1 3482 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002543.1 Genbank region 1 3482 . + . ID=PYKI01002543.1:1..3482;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002543.1 Genbank gene 1 1034 . + . ID=gene-C9F07_25230;Name=C9F07_25230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25230;partial=true;start_range=.,1 PYKI01002543.1 Protein Homology CDS 1 1034 . + 2 ID=cds-TGD49968.1;Parent=gene-C9F07_25230;Dbxref=NCBI_GP:TGD49968.1;Name=TGD49968.1;Note=TRAP family transporter%3B with YiaMO is involved in the uptake of L-dehydroascorbate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=C9F07_25230;partial=true;product=L-dehydroascorbate transporter large permease subunit;protein_id=TGD49968.1;start_range=.,1;transl_table=11 PYKI01002543.1 Genbank gene 1045 2031 . + . ID=gene-C9F07_25235;Name=C9F07_25235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25235 PYKI01002543.1 Protein Homology CDS 1045 2031 . + 0 ID=cds-TGD49969.1;Parent=gene-C9F07_25235;Dbxref=NCBI_GP:TGD49969.1;Name=TGD49969.1;Note=involved in the transport of 2%2C3-diketo-L-gulonate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=C9F07_25235;product=TRAP transporter substrate-binding protein;protein_id=TGD49969.1;transl_table=11 PYKI01002543.1 Genbank gene 2035 3482 . + . ID=gene-C9F07_25240;Name=C9F07_25240;end_range=3482,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25240;partial=true PYKI01002543.1 Protein Homology CDS 2035 3482 . + 0 ID=cds-TGD49970.1;Parent=gene-C9F07_25240;Dbxref=NCBI_GP:TGD49970.1;Name=TGD49970.1;Note=catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate%2C respectively;end_range=3482,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=C9F07_25240;partial=true;product=carbohydrate kinase;protein_id=TGD49970.1;transl_table=11 ##sequence-region PYKI01000396.1 1 797 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000396.1 Genbank region 1 797 . + . ID=PYKI01000396.1:1..797;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000396.1 Genbank gene 1 537 . + . ID=gene-C9F07_03005;Name=C9F07_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03005;partial=true;start_range=.,1 PYKI01000396.1 Protein Homology CDS 1 537 . + 0 ID=cds-TGE22772.1;Parent=gene-C9F07_03005;Dbxref=NCBI_GP:TGE22772.1;Name=TGE22772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131802.1;locus_tag=C9F07_03005;partial=true;product=LLM class flavin-dependent oxidoreductase;protein_id=TGE22772.1;start_range=.,1;transl_table=11 PYKI01000396.1 Genbank gene 628 797 . - . ID=gene-C9F07_03010;Name=C9F07_03010;end_range=797,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03010;partial=true PYKI01000396.1 Protein Homology CDS 628 797 . - 2 ID=cds-TGE22773.1;Parent=gene-C9F07_03010;Dbxref=NCBI_GP:TGE22773.1;Name=TGE22773.1;Note=tryptophan transporter of high affinity;end_range=797,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457661.1;locus_tag=C9F07_03010;partial=true;product=tryptophan permease;protein_id=TGE22773.1;transl_table=11 ##sequence-region PYKI01000646.1 1 796 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000646.1 Genbank region 1 796 . + . ID=PYKI01000646.1:1..796;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000646.1 Genbank gene 84 521 . + . ID=gene-C9F07_05590;Name=C9F07_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05590 PYKI01000646.1 Protein Homology CDS 84 521 . + 0 ID=cds-TGE12593.1;Parent=gene-C9F07_05590;Dbxref=NCBI_GP:TGE12593.1;Name=TGE12593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=C9F07_05590;product=acetyltransferase;protein_id=TGE12593.1;transl_table=11 ##sequence-region PYKI01003234.1 1 795 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003234.1 Genbank region 1 795 . + . ID=PYKI01003234.1:1..795;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003234.1 Genbank gene 1 502 . - . ID=gene-C9F07_32575;Name=C9F07_32575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32575;partial=true;start_range=.,1 PYKI01003234.1 Protein Homology CDS 1 502 . - 0 ID=cds-TGD36520.1;Parent=gene-C9F07_32575;Dbxref=NCBI_GP:TGD36520.1;Name=TGD36520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459836.1;locus_tag=C9F07_32575;partial=true;product=LysR family transcriptional regulator;protein_id=TGD36520.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002270.1 1 794 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002270.1 Genbank region 1 794 . + . ID=PYKI01002270.1:1..794;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002270.1 Genbank gene 55 794 . + . ID=gene-C9F07_22220;Name=C9F07_22220;end_range=794,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22220;partial=true PYKI01002270.1 Protein Homology CDS 55 794 . + 0 ID=cds-TGD55199.1;Parent=gene-C9F07_22220;Dbxref=NCBI_GP:TGD55199.1;Name=TGD55199.1;end_range=794,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=C9F07_22220;partial=true;product=DNA-binding transcriptional regulator;protein_id=TGD55199.1;transl_table=11 ##sequence-region PYKI01002615.1 1 794 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002615.1 Genbank region 1 794 . + . ID=PYKI01002615.1:1..794;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002615.1 Genbank gene 1 167 . - . ID=gene-C9F07_26005;Name=C9F07_26005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26005;partial=true;start_range=.,1 PYKI01002615.1 Protein Homology CDS 1 167 . - 0 ID=cds-TGD49541.1;Parent=gene-C9F07_26005;Dbxref=NCBI_GP:TGD49541.1;Name=TGD49541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=C9F07_26005;partial=true;product=Na+/H+ antiporter;protein_id=TGD49541.1;start_range=.,1;transl_table=11 PYKI01002615.1 Genbank gene 166 324 . + . ID=gene-C9F07_26010;Name=C9F07_26010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26010 PYKI01002615.1 Protein Homology CDS 166 324 . + 0 ID=cds-TGD49542.1;Parent=gene-C9F07_26010;Dbxref=NCBI_GP:TGD49542.1;Name=TGD49542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008992001.1;locus_tag=C9F07_26010;product=hypothetical protein;protein_id=TGD49542.1;transl_table=11 PYKI01002615.1 Genbank pseudogene 317 730 . - . ID=gene-C9F07_26015;Name=C9F07_26015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26015;pseudo=true PYKI01002615.1 Protein Homology CDS 317 730 . - 0 ID=cds-C9F07_26015;Parent=gene-C9F07_26015;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=C9F07_26015;product=permease;pseudo=true;transl_table=11 ##sequence-region PYKI01000874.1 1 793 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000874.1 Genbank region 1 793 . + . ID=PYKI01000874.1:1..793;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000874.1 Genbank pseudogene 82 588 . - . ID=gene-C9F07_08030;Name=purE;gbkey=Gene;gene=purE;gene_biotype=pseudogene;locus_tag=C9F07_08030;pseudo=true PYKI01000874.1 Protein Homology CDS 82 588 . - 0 ID=cds-C9F07_08030;Parent=gene-C9F07_08030;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=purE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=C9F07_08030;product=5-(carboxyamino)imidazole ribonucleotide mutase;pseudo=true;transl_table=11 PYKI01000874.1 Genbank pseudogene 521 675 . + . ID=gene-C9F07_08035;Name=C9F07_08035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08035;pseudo=true PYKI01000874.1 Protein Homology CDS 521 675 . + 0 ID=cds-C9F07_08035;Parent=gene-C9F07_08035;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004143004.1;locus_tag=C9F07_08035;product=MarR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01003242.1 1 793 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003242.1 Genbank region 1 793 . + . ID=PYKI01003242.1:1..793;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003242.1 Genbank gene 1 793 . - . ID=gene-C9F07_32655;Name=C9F07_32655;end_range=793,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32655;partial=true;start_range=.,1 PYKI01003242.1 Protein Homology CDS 1 793 . - 2 ID=cds-TGD36412.1;Parent=gene-C9F07_32655;Dbxref=NCBI_GP:TGD36412.1;Name=TGD36412.1;end_range=793,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=C9F07_32655;partial=true;product=phosphoethanolamine transferase;protein_id=TGD36412.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000457.1 1 793 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000457.1 Genbank region 1 793 . + . ID=PYKI01000457.1:1..793;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000457.1 Genbank pseudogene 74 367 . - . ID=gene-C9F07_03580;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=pseudogene;locus_tag=C9F07_03580;pseudo=true PYKI01000457.1 Protein Homology CDS 74 367 . - 0 ID=cds-C9F07_03580;Parent=gene-C9F07_03580;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=nagB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=C9F07_03580;product=glucosamine-6-phosphate deaminase;pseudo=true;transl_table=11 ##sequence-region PYKI01001476.1 1 792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001476.1 Genbank region 1 792 . + . ID=PYKI01001476.1:1..792;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001476.1 Genbank gene 1 792 . + . ID=gene-C9F07_14005;Name=C9F07_14005;end_range=792,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14005;partial=true;start_range=.,1 PYKI01001476.1 Protein Homology CDS 1 792 . + 0 ID=cds-TGD80082.1;Parent=gene-C9F07_14005;Dbxref=NCBI_GP:TGD80082.1;Name=TGD80082.1;end_range=792,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=C9F07_14005;partial=true;product=amino acid transporter;protein_id=TGD80082.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002651.1 1 792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002651.1 Genbank region 1 792 . + . ID=PYKI01002651.1:1..792;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002651.1 Genbank gene 196 792 . + . ID=gene-C9F07_26400;Name=C9F07_26400;end_range=792,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26400;partial=true PYKI01002651.1 Protein Homology CDS 196 792 . + 0 ID=cds-TGD49367.1;Parent=gene-C9F07_26400;Dbxref=NCBI_GP:TGD49367.1;Name=TGD49367.1;end_range=792,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527995.1;locus_tag=C9F07_26400;partial=true;product=NADP(H)-dependent aldo-keto reductase;protein_id=TGD49367.1;transl_table=11 ##sequence-region PYKI01000460.1 1 3419 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000460.1 Genbank region 1 3419 . + . ID=PYKI01000460.1:1..3419;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000460.1 Genbank gene 1 818 . + . ID=gene-C9F07_03595;Name=C9F07_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03595;partial=true;start_range=.,1 PYKI01000460.1 Protein Homology CDS 1 818 . + 2 ID=cds-TGE19770.1;Parent=gene-C9F07_03595;Dbxref=NCBI_GP:TGE19770.1;Name=TGE19770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=C9F07_03595;partial=true;product=phosphoglycerate dehydrogenase;protein_id=TGE19770.1;start_range=.,1;transl_table=11 PYKI01000460.1 Genbank gene 1199 1795 . - . ID=gene-C9F07_03600;Name=C9F07_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03600 PYKI01000460.1 Protein Homology CDS 1199 1795 . - 0 ID=cds-TGE19771.1;Parent=gene-C9F07_03600;Dbxref=NCBI_GP:TGE19771.1;Name=TGE19771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003825482.1;locus_tag=C9F07_03600;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=TGE19771.1;transl_table=11 PYKI01000460.1 Genbank gene 1816 1999 . - . ID=gene-C9F07_03605;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=C9F07_03605 PYKI01000460.1 cmsearch ncRNA 1816 1999 . - . ID=rna-C9F07_03605;Parent=gene-C9F07_03605;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00013,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_03605;product=6S RNA PYKI01000460.1 cmsearch exon 1816 1999 . - . ID=exon-C9F07_03605-1;Parent=rna-C9F07_03605;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00013,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_03605;product=6S RNA PYKI01000460.1 Genbank gene 2041 2370 . - . ID=gene-C9F07_03610;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=C9F07_03610 PYKI01000460.1 Protein Homology CDS 2041 2370 . - 0 ID=cds-TGE19772.1;Parent=gene-C9F07_03610;Dbxref=NCBI_GP:TGE19772.1;Name=TGE19772.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457458.1;locus_tag=C9F07_03610;product=cell division protein ZapA;protein_id=TGE19772.1;transl_table=11 PYKI01000460.1 Genbank pseudogene 2319 2507 . - . ID=gene-C9F07_03615;Name=C9F07_03615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03615;pseudo=true PYKI01000460.1 Protein Homology CDS 2319 2507 . - 0 ID=cds-C9F07_03615;Parent=gene-C9F07_03615;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001307994.1;locus_tag=C9F07_03615;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000460.1 Genbank gene 2531 3115 . + . ID=gene-C9F07_03620;Name=C9F07_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03620 PYKI01000460.1 Protein Homology CDS 2531 3115 . + 0 ID=cds-TGE19773.1;Parent=gene-C9F07_03620;Dbxref=NCBI_GP:TGE19773.1;Name=TGE19773.1;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461975.3;locus_tag=C9F07_03620;product=YecA family protein;protein_id=TGE19773.1;transl_table=11 PYKI01000460.1 Genbank gene 3141 3419 . + . ID=gene-C9F07_03625;Name=C9F07_03625;end_range=3419,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03625;partial=true PYKI01000460.1 Protein Homology CDS 3141 3419 . + 0 ID=cds-TGE19774.1;Parent=gene-C9F07_03625;Dbxref=NCBI_GP:TGE19774.1;Name=TGE19774.1;Note=exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide;end_range=3419,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457456.1;locus_tag=C9F07_03625;partial=true;product=Xaa-Pro aminopeptidase;protein_id=TGE19774.1;transl_table=11 ##sequence-region PYKI01000943.1 1 792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000943.1 Genbank region 1 792 . + . ID=PYKI01000943.1:1..792;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000943.1 Genbank gene 3 197 . + . ID=gene-C9F07_08595;Name=C9F07_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08595 PYKI01000943.1 Protein Homology CDS 3 197 . + 0 ID=cds-TGE02058.1;Parent=gene-C9F07_08595;Dbxref=NCBI_GP:TGE02058.1;Name=TGE02058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001313904.1;locus_tag=C9F07_08595;product=hypothetical protein;protein_id=TGE02058.1;transl_table=11 PYKI01000943.1 Genbank gene 315 792 . + . ID=gene-C9F07_08600;Name=C9F07_08600;end_range=792,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08600;partial=true PYKI01000943.1 Protein Homology CDS 315 792 . + 0 ID=cds-TGE02059.1;Parent=gene-C9F07_08600;Dbxref=NCBI_GP:TGE02059.1;Name=TGE02059.1;end_range=792,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=C9F07_08600;partial=true;product=selenide%2C water dikinase SelD;protein_id=TGE02059.1;transl_table=11 ##sequence-region PYKI01001049.1 1 792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001049.1 Genbank region 1 792 . + . ID=PYKI01001049.1:1..792;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001049.1 Genbank gene 7 336 . + . ID=gene-C9F07_09690;Name=C9F07_09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09690 PYKI01001049.1 Protein Homology CDS 7 336 . + 0 ID=cds-TGD96520.1;Parent=gene-C9F07_09690;Dbxref=NCBI_GP:TGD96520.1;Name=TGD96520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001558499.1;locus_tag=C9F07_09690;product=fumarylacetoacetate (FAA) hydrolase;protein_id=TGD96520.1;transl_table=11 PYKI01001049.1 Genbank gene 414 792 . + . ID=gene-C9F07_09695;Name=C9F07_09695;end_range=792,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09695;partial=true PYKI01001049.1 Protein Homology CDS 414 792 . + 0 ID=cds-TGD96521.1;Parent=gene-C9F07_09695;Dbxref=NCBI_GP:TGD96521.1;Name=TGD96521.1;end_range=792,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460767.3;locus_tag=C9F07_09695;partial=true;product=YcgN family cysteine cluster protein;protein_id=TGD96521.1;transl_table=11 ##sequence-region PYKI01000355.1 1 791 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000355.1 Genbank region 1 791 . + . ID=PYKI01000355.1:1..791;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000355.1 Genbank gene 1 317 . + . ID=gene-C9F07_02675;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=C9F07_02675;partial=true;start_range=.,1 PYKI01000355.1 Protein Homology CDS 1 317 . + 2 ID=cds-TGE26806.1;Parent=gene-C9F07_02675;Dbxref=NCBI_GP:TGE26806.1;Name=TGE26806.1;Note=response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54;gbkey=CDS;gene=glnG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=C9F07_02675;partial=true;product=nitrogen regulation protein NR(I);protein_id=TGE26806.1;start_range=.,1;transl_table=11 PYKI01000355.1 Genbank gene 430 540 . + . ID=gene-C9F07_02680;Name=C9F07_02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02680 PYKI01000355.1 Protein Homology CDS 430 540 . + 0 ID=cds-TGE26807.1;Parent=gene-C9F07_02680;Dbxref=NCBI_GP:TGE26807.1;Name=TGE26807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=C9F07_02680;product=hypothetical protein;protein_id=TGE26807.1;transl_table=11 PYKI01000355.1 Genbank pseudogene 630 785 . - . ID=gene-C9F07_02685;Name=C9F07_02685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02685;pseudo=true PYKI01000355.1 Protein Homology CDS 630 785 . - 0 ID=cds-C9F07_02685;Parent=gene-C9F07_02685;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458045.1;locus_tag=C9F07_02685;product=oxygen-independent coproporphyrinogen III oxidase;pseudo=true;transl_table=11 ##sequence-region PYKI01002904.1 1 791 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002904.1 Genbank region 1 791 . + . ID=PYKI01002904.1:1..791;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002904.1 Genbank pseudogene 62 679 . + . ID=gene-C9F07_29095;Name=C9F07_29095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29095;pseudo=true PYKI01002904.1 Protein Homology CDS 62 679 . + 0 ID=cds-C9F07_29095;Parent=gene-C9F07_29095;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458905.1;locus_tag=C9F07_29095;product=capsid protein;pseudo=true;transl_table=11 PYKI01002904.1 Genbank gene 683 791 . + . ID=gene-C9F07_29100;Name=C9F07_29100;end_range=791,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29100;partial=true PYKI01002904.1 Protein Homology CDS 683 791 . + 0 ID=cds-TGD43706.1;Parent=gene-C9F07_29100;Dbxref=NCBI_GP:TGD43706.1;Name=TGD43706.1;end_range=791,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458904.1;locus_tag=C9F07_29100;partial=true;product=hypothetical protein;protein_id=TGD43706.1;transl_table=11 ##sequence-region PYKI01003184.1 1 790 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003184.1 Genbank region 1 790 . + . ID=PYKI01003184.1:1..790;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003184.1 Genbank pseudogene 1 758 . + . ID=gene-C9F07_31955;Name=C9F07_31955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31955;pseudo=true PYKI01003184.1 Protein Homology CDS 1 758 . + 2 ID=cds-C9F07_31955;Parent=gene-C9F07_31955;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001107324.1;locus_tag=C9F07_31955;product=phage portal protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001378.1 1 790 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001378.1 Genbank region 1 790 . + . ID=PYKI01001378.1:1..790;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001378.1 Genbank gene 60 790 . + . ID=gene-C9F07_12965;Name=lpxH;end_range=790,.;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=C9F07_12965;partial=true PYKI01001378.1 Protein Homology CDS 60 790 . + 0 ID=cds-TGD84476.1;Parent=gene-C9F07_12965;Dbxref=NCBI_GP:TGD84476.1;Name=TGD84476.1;end_range=790,.;gbkey=CDS;gene=lpxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=C9F07_12965;partial=true;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=TGD84476.1;transl_table=11 ##sequence-region PYKI01002486.1 1 790 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002486.1 Genbank region 1 790 . + . ID=PYKI01002486.1:1..790;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002486.1 Genbank gene 1 554 . + . ID=gene-C9F07_24580;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=C9F07_24580;partial=true;start_range=.,1 PYKI01002486.1 Protein Homology CDS 1 554 . + 2 ID=cds-TGD50424.1;Parent=gene-C9F07_24580;Dbxref=NCBI_GP:TGD50424.1;Name=TGD50424.1;Note=complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH;gbkey=CDS;gene=tas;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527995.1;locus_tag=C9F07_24580;partial=true;product=NADP(H)-dependent aldo-keto reductase;protein_id=TGD50424.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002427.1 1 790 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002427.1 Genbank region 1 790 . + . ID=PYKI01002427.1:1..790;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002427.1 Genbank gene 1 742 . + . ID=gene-C9F07_23990;Name=C9F07_23990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23990;partial=true;start_range=.,1 PYKI01002427.1 Protein Homology CDS 1 742 . + 1 ID=cds-TGD51335.1;Parent=gene-C9F07_23990;Dbxref=NCBI_GP:TGD51335.1;Name=TGD51335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455709.1;locus_tag=C9F07_23990;partial=true;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=TGD51335.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000043.1 1 789 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000043.1 Genbank region 1 789 . + . ID=PYKI01000043.1:1..789;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000043.1 Genbank gene 108 789 . - . ID=gene-C9F07_00240;Name=C9F07_00240;end_range=789,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00240;partial=true PYKI01000043.1 Protein Homology CDS 108 789 . - 1 ID=cds-TGE30195.1;Parent=gene-C9F07_00240;Dbxref=NCBI_GP:TGE30195.1;Name=TGE30195.1;end_range=789,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457903.1;locus_tag=C9F07_00240;partial=true;product=DUF1481 domain-containing protein;protein_id=TGE30195.1;transl_table=11 ##sequence-region PYKI01001735.1 1 788 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001735.1 Genbank region 1 788 . + . ID=PYKI01001735.1:1..788;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001735.1 Genbank gene 52 687 . - . ID=gene-C9F07_16590;Name=C9F07_16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16590 PYKI01001735.1 Protein Homology CDS 52 687 . - 0 ID=cds-TGD68673.1;Parent=gene-C9F07_16590;Dbxref=NCBI_GP:TGD68673.1;Name=TGD68673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461425.3;locus_tag=C9F07_16590;product=glycine cleavage system transcriptional repressor;protein_id=TGD68673.1;transl_table=11 ##sequence-region PYKI01000555.1 1 3472 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000555.1 Genbank region 1 3472 . + . ID=PYKI01000555.1:1..3472;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000555.1 Genbank pseudogene 100 546 . + . ID=gene-C9F07_04640;Name=malF;gbkey=Gene;gene=malF;gene_biotype=pseudogene;locus_tag=C9F07_04640;pseudo=true PYKI01000555.1 Protein Homology CDS 100 546 . + 0 ID=cds-C9F07_04640;Parent=gene-C9F07_04640;Note=with MalKGE is involved in maltose transport into the cell%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=malF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004591880.1;locus_tag=C9F07_04640;product=maltose ABC transporter permease MalF;pseudo=true;transl_table=11 PYKI01000555.1 Genbank gene 561 1451 . + . ID=gene-C9F07_04645;Name=C9F07_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04645 PYKI01000555.1 Protein Homology CDS 561 1451 . + 0 ID=cds-TGE15023.1;Parent=gene-C9F07_04645;Dbxref=NCBI_GP:TGE15023.1;Name=TGE15023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458525.1;locus_tag=C9F07_04645;product=maltose ABC transporter permease MalG;protein_id=TGE15023.1;transl_table=11 PYKI01000555.1 Genbank gene 1771 3246 . + . ID=gene-C9F07_04650;Name=C9F07_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04650 PYKI01000555.1 Protein Homology CDS 1771 3246 . + 0 ID=cds-TGE15024.1;Parent=gene-C9F07_04650;Dbxref=NCBI_GP:TGE15024.1;Name=TGE15024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031675.1;locus_tag=C9F07_04650;product=D-xylose transporter XylE;protein_id=TGE15024.1;transl_table=11 PYKI01000555.1 Genbank gene 3292 3472 . - . ID=gene-C9F07_04655;Name=C9F07_04655;end_range=3472,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04655;partial=true PYKI01000555.1 Protein Homology CDS 3292 3472 . - 1 ID=cds-TGE15025.1;Parent=gene-C9F07_04655;Dbxref=NCBI_GP:TGE15025.1;Name=TGE15025.1;end_range=3472,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458524.1;locus_tag=C9F07_04655;partial=true;product=hypothetical protein;protein_id=TGE15025.1;transl_table=11 ##sequence-region PYKI01000897.1 1 788 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000897.1 Genbank region 1 788 . + . ID=PYKI01000897.1:1..788;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000897.1 Genbank gene 1 788 . - . ID=gene-C9F07_08210;Name=C9F07_08210;end_range=788,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08210;partial=true;start_range=.,1 PYKI01000897.1 Protein Homology CDS 1 788 . - 0 ID=cds-TGE03452.1;Parent=gene-C9F07_08210;Dbxref=NCBI_GP:TGE03452.1;Name=TGE03452.1;Note=involved in the transporte of L-asparagine;end_range=788,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455912.1;locus_tag=C9F07_08210;partial=true;product=amino acid permease;protein_id=TGE03452.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001995.1 1 788 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001995.1 Genbank region 1 788 . + . ID=PYKI01001995.1:1..788;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001995.1 Genbank gene 1 788 . + . ID=gene-C9F07_19250;Name=C9F07_19250;end_range=788,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19250;partial=true;start_range=.,1 PYKI01001995.1 Protein Homology CDS 1 788 . + 1 ID=cds-TGD60176.1;Parent=gene-C9F07_19250;Dbxref=NCBI_GP:TGD60176.1;Name=TGD60176.1;end_range=788,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=C9F07_19250;partial=true;product=hydrogenase 2 large subunit;protein_id=TGD60176.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003504.1 1 788 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003504.1 Genbank region 1 788 . + . ID=PYKI01003504.1:1..788;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003504.1 Genbank gene 27 788 . - . ID=gene-C9F07_35305;Name=C9F07_35305;end_range=788,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35305;partial=true PYKI01003504.1 Protein Homology CDS 27 788 . - 0 ID=cds-TGD31909.1;Parent=gene-C9F07_35305;Dbxref=NCBI_GP:TGD31909.1;Name=TGD31909.1;end_range=788,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=C9F07_35305;partial=true;product=N-acetylmannosamine kinase;protein_id=TGD31909.1;transl_table=11 ##sequence-region PYKI01002830.1 1 786 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002830.1 Genbank region 1 786 . + . ID=PYKI01002830.1:1..786;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002830.1 Genbank gene 1 244 . - . ID=gene-C9F07_28310;Name=C9F07_28310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28310;partial=true;start_range=.,1 PYKI01002830.1 Protein Homology CDS 1 244 . - 0 ID=cds-TGD45600.1;Parent=gene-C9F07_28310;Dbxref=NCBI_GP:TGD45600.1;Name=TGD45600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454884.1;locus_tag=C9F07_28310;partial=true;product=type VI secretion system baseplate subunit TssK;protein_id=TGD45600.1;start_range=.,1;transl_table=11 PYKI01002830.1 Genbank gene 248 739 . - . ID=gene-C9F07_28315;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=C9F07_28315 PYKI01002830.1 Protein Homology CDS 248 739 . - 0 ID=cds-TGD45601.1;Parent=gene-C9F07_28315;Dbxref=NCBI_GP:TGD45601.1;Name=TGD45601.1;gbkey=CDS;gene=tssJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011488491.1;locus_tag=C9F07_28315;product=type VI secretion system lipoprotein TssJ;protein_id=TGD45601.1;transl_table=11 ##sequence-region PYKI01000849.1 1 786 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000849.1 Genbank region 1 786 . + . ID=PYKI01000849.1:1..786;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000849.1 Genbank pseudogene 63 536 . + . ID=gene-C9F07_07730;Name=C9F07_07730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07730;pseudo=true PYKI01000849.1 Protein Homology CDS 63 536 . + 0 ID=cds-C9F07_07730;Parent=gene-C9F07_07730;Note=catalyzes the interconversion of D-xylose to D-xylulose%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=C9F07_07730;product=xylose isomerase;pseudo=true;transl_table=11 PYKI01000849.1 Genbank gene 636 786 . + . ID=gene-C9F07_07735;Name=C9F07_07735;end_range=786,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07735;partial=true PYKI01000849.1 Protein Homology CDS 636 786 . + 0 ID=cds-TGE06859.1;Parent=gene-C9F07_07735;Dbxref=NCBI_GP:TGE06859.1;Name=TGE06859.1;Note=catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose;end_range=786,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=C9F07_07735;partial=true;product=xylulokinase;protein_id=TGE06859.1;transl_table=11 ##sequence-region PYKI01000137.1 1 785 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000137.1 Genbank region 1 785 . + . ID=PYKI01000137.1:1..785;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000137.1 Genbank gene 1 212 . - . ID=gene-C9F07_00920;Name=C9F07_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00920;partial=true;start_range=.,1 PYKI01000137.1 Protein Homology CDS 1 212 . - 0 ID=cds-TGE30087.1;Parent=gene-C9F07_00920;Dbxref=NCBI_GP:TGE30087.1;Name=TGE30087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455614.1;locus_tag=C9F07_00920;partial=true;product=NAD(P)H:quinone oxidoreductase;protein_id=TGE30087.1;start_range=.,1;transl_table=11 PYKI01000137.1 Genbank gene 346 570 . + . ID=gene-C9F07_00925;Name=C9F07_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00925 PYKI01000137.1 Protein Homology CDS 346 570 . + 0 ID=cds-TGE30088.1;Parent=gene-C9F07_00925;Dbxref=NCBI_GP:TGE30088.1;Name=TGE30088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218964.1;locus_tag=C9F07_00925;product=hypothetical protein;protein_id=TGE30088.1;transl_table=11 PYKI01000137.1 Genbank gene 597 764 . + . ID=gene-C9F07_00930;Name=C9F07_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00930 PYKI01000137.1 Protein Homology CDS 597 764 . + 0 ID=cds-TGE30089.1;Parent=gene-C9F07_00930;Dbxref=NCBI_GP:TGE30089.1;Name=TGE30089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=C9F07_00930;product=stress-induced protein;protein_id=TGE30089.1;transl_table=11 ##sequence-region PYKI01000855.1 1 785 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000855.1 Genbank region 1 785 . + . ID=PYKI01000855.1:1..785;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000855.1 Genbank pseudogene 37 291 . + . ID=gene-C9F07_07830;Name=C9F07_07830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07830;pseudo=true PYKI01000855.1 Protein Homology CDS 37 291 . + 0 ID=cds-C9F07_07830;Parent=gene-C9F07_07830;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456676.1;locus_tag=C9F07_07830;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000855.1 Genbank gene 288 785 . + . ID=gene-C9F07_07835;Name=C9F07_07835;end_range=785,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07835;partial=true PYKI01000855.1 Protein Homology CDS 288 785 . + 0 ID=cds-TGE05966.1;Parent=gene-C9F07_07835;Dbxref=NCBI_GP:TGE05966.1;Name=TGE05966.1;Note=response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport;end_range=785,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=C9F07_07835;partial=true;product=two-component system response regulator BaeR;protein_id=TGE05966.1;transl_table=11 ##sequence-region PYKI01003357.1 1 785 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003357.1 Genbank region 1 785 . + . ID=PYKI01003357.1:1..785;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003357.1 Genbank gene 1 325 . - . ID=gene-C9F07_33815;Name=C9F07_33815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33815;partial=true;start_range=.,1 PYKI01003357.1 Protein Homology CDS 1 325 . - 0 ID=cds-TGD35000.1;Parent=gene-C9F07_33815;Dbxref=NCBI_GP:TGD35000.1;Name=TGD35000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457652.1;locus_tag=C9F07_33815;partial=true;product=hypothetical protein;protein_id=TGD35000.1;start_range=.,1;transl_table=11 PYKI01003357.1 Genbank pseudogene 456 710 . + . ID=gene-C9F07_33820;Name=C9F07_33820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33820;pseudo=true PYKI01003357.1 Protein Homology CDS 456 710 . + 0 ID=cds-C9F07_33820;Parent=gene-C9F07_33820;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457653.1;locus_tag=C9F07_33820;product=protease;pseudo=true;transl_table=11 ##sequence-region PYKI01002949.1 1 785 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002949.1 Genbank region 1 785 . + . ID=PYKI01002949.1:1..785;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002949.1 Genbank pseudogene 126 785 . + . ID=gene-C9F07_29560;Name=C9F07_29560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29560;pseudo=true PYKI01002949.1 Protein Homology CDS 126 785 . + 0 ID=cds-C9F07_29560;Parent=gene-C9F07_29560;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=C9F07_29560;product=acetolactate synthase catalytic subunit;pseudo=true;transl_table=11 ##sequence-region PYKI01002433.1 1 3462 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002433.1 Genbank region 1 3462 . + . ID=PYKI01002433.1:1..3462;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002433.1 Genbank gene 257 802 . - . ID=gene-C9F07_24040;Name=C9F07_24040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24040 PYKI01002433.1 Protein Homology CDS 257 802 . - 0 ID=cds-TGD51223.1;Parent=gene-C9F07_24040;Dbxref=NCBI_GP:TGD51223.1;Name=TGD51223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456242.1;locus_tag=C9F07_24040;product=chorismate mutase;protein_id=TGD51223.1;transl_table=11 PYKI01002433.1 Genbank gene 1118 1366 . + . ID=gene-C9F07_24045;Name=C9F07_24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24045 PYKI01002433.1 Protein Homology CDS 1118 1366 . + 0 ID=cds-TGD51224.1;Parent=gene-C9F07_24045;Dbxref=NCBI_GP:TGD51224.1;Name=TGD51224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=C9F07_24045;product=histidine kinase;protein_id=TGD51224.1;transl_table=11 PYKI01002433.1 Genbank pseudogene 1328 1518 . - . ID=gene-C9F07_24050;Name=C9F07_24050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24050;pseudo=true PYKI01002433.1 Protein Homology CDS 1328 1518 . - 0 ID=cds-C9F07_24050;Parent=gene-C9F07_24050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001908484.1;locus_tag=C9F07_24050;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002433.1 Genbank gene 1621 2469 . - . ID=gene-C9F07_24055;Name=C9F07_24055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24055 PYKI01002433.1 Protein Homology CDS 1621 2469 . - 0 ID=cds-TGD51225.1;Parent=gene-C9F07_24055;Dbxref=NCBI_GP:TGD51225.1;Name=TGD51225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=C9F07_24055;product=MerR family DNA-binding transcriptional regulator;protein_id=TGD51225.1;transl_table=11 PYKI01002433.1 Genbank gene 2538 3131 . - . ID=gene-C9F07_24060;Name=C9F07_24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24060 PYKI01002433.1 Protein Homology CDS 2538 3131 . - 0 ID=cds-TGD51227.1;Parent=gene-C9F07_24060;Dbxref=NCBI_GP:TGD51227.1;Name=TGD51227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=C9F07_24060;product=LuxR family transcriptional regulator;protein_id=TGD51227.1;transl_table=11 PYKI01002433.1 Genbank gene 3276 3462 . - . ID=gene-C9F07_24065;Name=C9F07_24065;end_range=3462,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24065;partial=true PYKI01002433.1 Protein Homology CDS 3276 3462 . - 1 ID=cds-TGD51226.1;Parent=gene-C9F07_24065;Dbxref=NCBI_GP:TGD51226.1;Name=TGD51226.1;Note=streptomycin 3'-adenyltransferase;end_range=3462,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=C9F07_24065;partial=true;product=aminoglycoside resistance protein;protein_id=TGD51226.1;transl_table=11 ##sequence-region PYKI01003029.1 1 784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003029.1 Genbank region 1 784 . + . ID=PYKI01003029.1:1..784;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003029.1 Genbank gene 1 684 . + . ID=gene-C9F07_30410;Name=C9F07_30410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30410;partial=true;start_range=.,1 PYKI01003029.1 Protein Homology CDS 1 684 . + 0 ID=cds-TGD41088.1;Parent=gene-C9F07_30410;Dbxref=NCBI_GP:TGD41088.1;Name=TGD41088.1;Note=involved in the export and assembly of fimbriae subunit PetA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000016434.1;locus_tag=C9F07_30410;partial=true;product=outer membrane usher protein PefC;protein_id=TGD41088.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003192.1 1 784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003192.1 Genbank region 1 784 . + . ID=PYKI01003192.1:1..784;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003192.1 Genbank pseudogene 39 488 . - . ID=gene-C9F07_32040;Name=C9F07_32040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32040;pseudo=true PYKI01003192.1 Protein Homology CDS 39 488 . - 0 ID=cds-C9F07_32040;Parent=gene-C9F07_32040;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=C9F07_32040;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01003192.1 Genbank gene 703 784 . + . ID=gene-C9F07_32045;Name=C9F07_32045;end_range=784,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32045;partial=true PYKI01003192.1 Protein Homology CDS 703 784 . + 0 ID=cds-TGD37412.1;Parent=gene-C9F07_32045;Dbxref=NCBI_GP:TGD37412.1;Name=TGD37412.1;Note=DLP12 prophage%3B similar to PEBP/RK1P protein family in eukaryotes that inhibits MEK phosphorylation by Raf-1%3B crystal structure suggests similar properties but exact function is unknown;end_range=784,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=C9F07_32045;partial=true;product=kinase inhibitor;protein_id=TGD37412.1;transl_table=11 ##sequence-region PYKI01001051.1 1 784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001051.1 Genbank region 1 784 . + . ID=PYKI01001051.1:1..784;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001051.1 Genbank pseudogene 72 401 . + . ID=gene-C9F07_09720;Name=C9F07_09720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09720;pseudo=true PYKI01001051.1 Protein Homology CDS 72 401 . + 0 ID=cds-C9F07_09720;Parent=gene-C9F07_09720;Note=ethanolamine utilization protein%3B catalyzes the formation of acetyl-CoA from acetaldehyde%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=C9F07_09720;product=aldehyde dehydrogenase EutE;pseudo=true;transl_table=11 PYKI01001051.1 Genbank gene 412 784 . + . ID=gene-C9F07_09725;Name=C9F07_09725;end_range=784,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09725;partial=true PYKI01001051.1 Protein Homology CDS 412 784 . + 0 ID=cds-TGD96372.1;Parent=gene-C9F07_09725;Dbxref=NCBI_GP:TGD96372.1;Name=TGD96372.1;end_range=784,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456997.1;locus_tag=C9F07_09725;partial=true;product=hypothetical protein;protein_id=TGD96372.1;transl_table=11 ##sequence-region PYKI01003549.1 1 783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003549.1 Genbank region 1 783 . + . ID=PYKI01003549.1:1..783;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003549.1 Genbank gene 97 306 . + . ID=gene-C9F07_35835;Name=C9F07_35835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35835 PYKI01003549.1 Protein Homology CDS 97 306 . + 0 ID=cds-TGD30819.1;Parent=gene-C9F07_35835;Dbxref=NCBI_GP:TGD30819.1;Name=TGD30819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006547578.1;locus_tag=C9F07_35835;product=hypothetical protein;protein_id=TGD30819.1;transl_table=11 PYKI01003549.1 Genbank gene 303 783 . + . ID=gene-C9F07_35840;Name=C9F07_35840;end_range=783,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35840;partial=true PYKI01003549.1 Protein Homology CDS 303 783 . + 0 ID=cds-TGD30818.1;Parent=gene-C9F07_35840;Dbxref=NCBI_GP:TGD30818.1;Name=TGD30818.1;end_range=783,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456794.1;locus_tag=C9F07_35840;partial=true;product=hypothetical protein;protein_id=TGD30818.1;transl_table=11 ##sequence-region PYKI01002734.1 1 783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002734.1 Genbank region 1 783 . + . ID=PYKI01002734.1:1..783;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002734.1 Genbank gene 1 526 . + . ID=gene-C9F07_27275;Name=C9F07_27275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27275;partial=true;start_range=.,1 PYKI01002734.1 Protein Homology CDS 1 526 . + 1 ID=cds-TGD47263.1;Parent=gene-C9F07_27275;Dbxref=NCBI_GP:TGD47263.1;Name=TGD47263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455393.1;locus_tag=C9F07_27275;partial=true;product=multidrug transporter MdfA;protein_id=TGD47263.1;start_range=.,1;transl_table=11 PYKI01002734.1 Genbank gene 580 783 . - . ID=gene-C9F07_27280;Name=C9F07_27280;end_range=783,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27280;partial=true PYKI01002734.1 Protein Homology CDS 580 783 . - 0 ID=cds-TGD47264.1;Parent=gene-C9F07_27280;Dbxref=NCBI_GP:TGD47264.1;Name=TGD47264.1;end_range=783,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455394.1;locus_tag=C9F07_27280;partial=true;product=HAD family hydrolase;protein_id=TGD47264.1;transl_table=11 ##sequence-region PYKI01002373.1 1 783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002373.1 Genbank region 1 783 . + . ID=PYKI01002373.1:1..783;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002373.1 Genbank gene 1 431 . - . ID=gene-C9F07_23320;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=C9F07_23320;partial=true;start_range=.,1 PYKI01002373.1 Protein Homology CDS 1 431 . - 0 ID=cds-TGD52660.1;Parent=gene-C9F07_23320;Dbxref=NCBI_GP:TGD52660.1;Name=TGD52660.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=C9F07_23320;partial=true;product=stringent starvation protein A;protein_id=TGD52660.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002909.1 1 783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002909.1 Genbank region 1 783 . + . ID=PYKI01002909.1:1..783;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002909.1 Genbank pseudogene 1 221 . + . ID=gene-C9F07_29130;Name=C9F07_29130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29130;pseudo=true PYKI01002909.1 Protein Homology CDS 1 221 . + 2 ID=cds-C9F07_29130;Parent=gene-C9F07_29130;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000225632.1;locus_tag=C9F07_29130;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002909.1 Genbank gene 193 723 . + . ID=gene-C9F07_29135;Name=C9F07_29135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29135 PYKI01002909.1 Protein Homology CDS 193 723 . + 0 ID=cds-TGD43425.1;Parent=gene-C9F07_29135;Dbxref=NCBI_GP:TGD43425.1;Name=TGD43425.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457544.1;locus_tag=C9F07_29135;product=HslU--HslV peptidase proteolytic subunit;protein_id=TGD43425.1;transl_table=11 ##sequence-region PYKI01000284.1 1 783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000284.1 Genbank region 1 783 . + . ID=PYKI01000284.1:1..783;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000284.1 Genbank gene 1 783 . - . ID=gene-C9F07_01840;Name=hscA;end_range=783,.;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=C9F07_01840;partial=true;start_range=.,1 PYKI01000284.1 Protein Homology CDS 1 783 . - 0 ID=cds-TGE27825.1;Parent=gene-C9F07_01840;Dbxref=NCBI_GP:TGE27825.1;Name=TGE27825.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;end_range=783,.;gbkey=CDS;gene=hscA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=C9F07_01840;partial=true;product=Fe-S protein assembly chaperone HscA;protein_id=TGE27825.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003181.1 1 782 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003181.1 Genbank region 1 782 . + . ID=PYKI01003181.1:1..782;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003181.1 Genbank gene 1 782 . + . ID=gene-C9F07_31920;Name=C9F07_31920;end_range=782,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31920;partial=true;start_range=.,1 PYKI01003181.1 Protein Homology CDS 1 782 . + 1 ID=cds-TGD37661.1;Parent=gene-C9F07_31920;Dbxref=NCBI_GP:TGD37661.1;Name=TGD37661.1;end_range=782,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=C9F07_31920;partial=true;product=LacI family transcriptional regulator;protein_id=TGD37661.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000615.1 1 782 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000615.1 Genbank region 1 782 . + . ID=PYKI01000615.1:1..782;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000615.1 Genbank pseudogene 1 713 . - . ID=gene-C9F07_05300;Name=C9F07_05300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05300;pseudo=true PYKI01000615.1 Protein Homology CDS 1 713 . - 0 ID=cds-C9F07_05300;Parent=gene-C9F07_05300;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=C9F07_05300;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001441.1 1 3457 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001441.1 Genbank region 1 3457 . + . ID=PYKI01001441.1:1..3457;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001441.1 Genbank gene 1 575 . + . ID=gene-C9F07_13625;Name=C9F07_13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13625;partial=true;start_range=.,1 PYKI01001441.1 Protein Homology CDS 1 575 . + 2 ID=cds-TGD83689.1;Parent=gene-C9F07_13625;Dbxref=NCBI_GP:TGD83689.1;Name=TGD83689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455681.1;locus_tag=C9F07_13625;partial=true;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=TGD83689.1;start_range=.,1;transl_table=11 PYKI01001441.1 Genbank gene 670 1254 . - . ID=gene-C9F07_13630;Name=C9F07_13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13630 PYKI01001441.1 Protein Homology CDS 670 1254 . - 0 ID=cds-TGD83690.1;Parent=gene-C9F07_13630;Dbxref=NCBI_GP:TGD83690.1;Name=TGD83690.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455682.1;locus_tag=C9F07_13630;product=septum formation inhibitor Maf;protein_id=TGD83690.1;transl_table=11 PYKI01001441.1 Genbank gene 1452 1973 . + . ID=gene-C9F07_13635;Name=C9F07_13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13635 PYKI01001441.1 Protein Homology CDS 1452 1973 . + 0 ID=cds-TGD83691.1;Parent=gene-C9F07_13635;Dbxref=NCBI_GP:TGD83691.1;Name=TGD83691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=C9F07_13635;product=23S rRNA accumulation protein YceD;protein_id=TGD83691.1;transl_table=11 PYKI01001441.1 Genbank gene 2025 2198 . + . ID=gene-C9F07_13640;Name=C9F07_13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13640 PYKI01001441.1 Protein Homology CDS 2025 2198 . + 0 ID=cds-TGD83692.1;Parent=gene-C9F07_13640;Dbxref=NCBI_GP:TGD83692.1;Name=TGD83692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=C9F07_13640;product=50S ribosomal protein L32;protein_id=TGD83692.1;transl_table=11 PYKI01001441.1 Genbank gene 2332 3411 . + . ID=gene-C9F07_13645;Name=C9F07_13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13645 PYKI01001441.1 Protein Homology CDS 2332 3411 . + 0 ID=cds-TGD83693.1;Parent=gene-C9F07_13645;Dbxref=NCBI_GP:TGD83693.1;Name=TGD83693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455685.1;locus_tag=C9F07_13645;product=phosphate acyltransferase PlsX;protein_id=TGD83693.1;transl_table=11 ##sequence-region PYKI01000842.1 1 782 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000842.1 Genbank region 1 782 . + . ID=PYKI01000842.1:1..782;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000842.1 Genbank pseudogene 80 265 . - . ID=gene-C9F07_07675;Name=napH;gbkey=Gene;gene=napH;gene_biotype=pseudogene;locus_tag=C9F07_07675;pseudo=true PYKI01000842.1 Protein Homology CDS 80 265 . - 0 ID=cds-C9F07_07675;Parent=gene-C9F07_07675;Note=part of NapHG quinol dehydrogenase%3B couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456802.1;locus_tag=C9F07_07675;product=quinol dehydrogenase ferredoxin subunit NapH;pseudo=true;transl_table=11 PYKI01000842.1 Genbank gene 252 782 . - . ID=gene-C9F07_07680;Name=C9F07_07680;end_range=782,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07680;partial=true PYKI01000842.1 Protein Homology CDS 252 782 . - 0 ID=cds-TGE06981.1;Parent=gene-C9F07_07680;Dbxref=NCBI_GP:TGE06981.1;Name=TGE06981.1;end_range=782,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456803.1;locus_tag=C9F07_07680;partial=true;product=ferredoxin-type protein NapG;protein_id=TGE06981.1;transl_table=11 ##sequence-region PYKI01001840.1 1 781 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001840.1 Genbank region 1 781 . + . ID=PYKI01001840.1:1..781;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001840.1 Genbank pseudogene 32 352 . - . ID=gene-C9F07_17690;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=pseudogene;locus_tag=C9F07_17690;pseudo=true PYKI01001840.1 Protein Homology CDS 32 352 . - 0 ID=cds-C9F07_17690;Parent=gene-C9F07_17690;Note=catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=ubiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458532.1;locus_tag=C9F07_17690;product=4-hydroxybenzoate octaprenyltransferase;pseudo=true;transl_table=11 PYKI01001840.1 Genbank gene 366 781 . - . ID=gene-C9F07_17695;Name=C9F07_17695;end_range=781,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17695;partial=true PYKI01001840.1 Protein Homology CDS 366 781 . - 2 ID=cds-TGD63870.1;Parent=gene-C9F07_17695;Dbxref=NCBI_GP:TGD63870.1;Name=TGD63870.1;end_range=781,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458531.1;locus_tag=C9F07_17695;partial=true;product=chorismate lyase;protein_id=TGD63870.1;transl_table=11 ##sequence-region PYKI01001181.1 1 781 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001181.1 Genbank region 1 781 . + . ID=PYKI01001181.1:1..781;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001181.1 Genbank gene 1 781 . + . ID=gene-C9F07_11045;Name=pntA;end_range=781,.;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=C9F07_11045;partial=true;start_range=.,1 PYKI01001181.1 Protein Homology CDS 1 781 . + 0 ID=cds-TGD92363.1;Parent=gene-C9F07_11045;Dbxref=NCBI_GP:TGD92363.1;Name=TGD92363.1;end_range=781,.;gbkey=CDS;gene=pntA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456001.1;locus_tag=C9F07_11045;partial=true;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha;protein_id=TGD92363.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001856.1 1 781 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001856.1 Genbank region 1 781 . + . ID=PYKI01001856.1:1..781;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001856.1 Genbank gene 1 732 . - . ID=gene-C9F07_17855;Name=C9F07_17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17855;partial=true;start_range=.,1 PYKI01001856.1 Protein Homology CDS 1 732 . - 0 ID=cds-TGD63195.1;Parent=gene-C9F07_17855;Dbxref=NCBI_GP:TGD63195.1;Name=TGD63195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=C9F07_17855;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGD63195.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001413.1 1 780 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001413.1 Genbank region 1 780 . + . ID=PYKI01001413.1:1..780;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001413.1 Genbank gene 1 211 . + . ID=gene-C9F07_13405;Name=C9F07_13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13405;partial=true;start_range=.,1 PYKI01001413.1 Protein Homology CDS 1 211 . + 1 ID=cds-TGD83809.1;Parent=gene-C9F07_13405;Dbxref=NCBI_GP:TGD83809.1;Name=TGD83809.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456867.1;locus_tag=C9F07_13405;partial=true;product=NADH-quinone oxidoreductase subunit E;protein_id=TGD83809.1;start_range=.,1;transl_table=11 PYKI01001413.1 Genbank pseudogene 208 693 . + . ID=gene-C9F07_13410;Name=C9F07_13410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13410;pseudo=true PYKI01001413.1 Protein Homology CDS 208 693 . + 0 ID=cds-C9F07_13410;Parent=gene-C9F07_13410;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456866.1;locus_tag=C9F07_13410;product=NADH-quinone oxidoreductase subunit F;pseudo=true;transl_table=11 ##sequence-region PYKI01003279.1 1 780 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003279.1 Genbank region 1 780 . + . ID=PYKI01003279.1:1..780;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003279.1 Genbank gene 1 146 . - . ID=gene-C9F07_32980;Name=C9F07_32980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32980;partial=true;start_range=.,1 PYKI01003279.1 Protein Homology CDS 1 146 . - 0 ID=cds-TGD36154.1;Parent=gene-C9F07_32980;Dbxref=NCBI_GP:TGD36154.1;Name=TGD36154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457555.1;locus_tag=C9F07_32980;partial=true;product=DedA family protein;protein_id=TGD36154.1;start_range=.,1;transl_table=11 PYKI01003279.1 Genbank gene 286 780 . - . ID=gene-C9F07_32985;Name=C9F07_32985;end_range=780,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32985;partial=true PYKI01003279.1 Protein Homology CDS 286 780 . - 0 ID=cds-TGD36155.1;Parent=gene-C9F07_32985;Dbxref=NCBI_GP:TGD36155.1;Name=TGD36155.1;Note=catalyzes the formation of L-homocysteine from cystathionine;end_range=780,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=C9F07_32985;partial=true;product=cystathionine beta-lyase;protein_id=TGD36155.1;transl_table=11 ##sequence-region PYKI01001993.1 1 779 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001993.1 Genbank region 1 779 . + . ID=PYKI01001993.1:1..779;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001993.1 Genbank pseudogene 77 526 . - . ID=gene-C9F07_19235;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=pseudogene;locus_tag=C9F07_19235;pseudo=true PYKI01001993.1 Protein Homology CDS 77 526 . - 0 ID=cds-C9F07_19235;Parent=gene-C9F07_19235;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=lolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415411.2;locus_tag=C9F07_19235;product=outer membrane lipoprotein chaperone LolA;pseudo=true;transl_table=11 PYKI01001993.1 Genbank gene 669 779 . - . ID=gene-C9F07_19240;Name=C9F07_19240;end_range=779,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19240;partial=true PYKI01001993.1 Protein Homology CDS 669 779 . - 0 ID=cds-TGD60188.1;Parent=gene-C9F07_19240;Dbxref=NCBI_GP:TGD60188.1;Name=TGD60188.1;end_range=779,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716009.1;locus_tag=C9F07_19240;partial=true;product=cell division protein FtsK;protein_id=TGD60188.1;transl_table=11 ##sequence-region PYKI01000768.1 1 779 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000768.1 Genbank region 1 779 . + . ID=PYKI01000768.1:1..779;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000768.1 Genbank pseudogene 1 779 . - . ID=gene-C9F07_06790;Name=C9F07_06790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06790;pseudo=true PYKI01000768.1 Protein Homology CDS 1 779 . - 1 ID=cds-C9F07_06790;Parent=gene-C9F07_06790;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=C9F07_06790;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003260.1 1 778 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003260.1 Genbank region 1 778 . + . ID=PYKI01003260.1:1..778;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003260.1 Genbank gene 1 778 . + . ID=gene-C9F07_32780;Name=cysJ;end_range=778,.;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=C9F07_32780;partial=true;start_range=.,1 PYKI01003260.1 Protein Homology CDS 1 778 . + 0 ID=cds-TGD36261.1;Parent=gene-C9F07_32780;Dbxref=NCBI_GP:TGD36261.1;Name=TGD36261.1;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;end_range=778,.;gbkey=CDS;gene=cysJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457337.1;locus_tag=C9F07_32780;partial=true;product=sulfite reductase subunit alpha;protein_id=TGD36261.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000852.1 1 777 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000852.1 Genbank region 1 777 . + . ID=PYKI01000852.1:1..777;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000852.1 Genbank pseudogene 76 738 . - . ID=gene-C9F07_07785;Name=C9F07_07785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07785;pseudo=true PYKI01000852.1 Protein Homology CDS 76 738 . - 0 ID=cds-C9F07_07785;Parent=gene-C9F07_07785;Note=YieH%3B catalyzes the dephosphorylation of phosphoenolpyruvate%2C AMP and p-nitrophenyl phosphate%3B purine and pyrimidine nucleotides are secondary substrates%3B member of the haloacid dehalogenase-like hydrolases superfamily%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=C9F07_07785;product=6-phosphogluconate phosphatase;pseudo=true;transl_table=11 ##sequence-region PYKI01000712.1 1 3455 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000712.1 Genbank region 1 3455 . + . ID=PYKI01000712.1:1..3455;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000712.1 Genbank gene 24 740 . - . ID=gene-C9F07_06240;Name=C9F07_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06240 PYKI01000712.1 Protein Homology CDS 24 740 . - 0 ID=cds-TGE11297.1;Parent=gene-C9F07_06240;Dbxref=NCBI_GP:TGE11297.1;Name=TGE11297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=C9F07_06240;product=SDR family oxidoreductase;protein_id=TGE11297.1;transl_table=11 PYKI01000712.1 Genbank gene 806 2242 . - . ID=gene-C9F07_06245;Name=C9F07_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06245 PYKI01000712.1 Protein Homology CDS 806 2242 . - 0 ID=cds-TGE11298.1;Parent=gene-C9F07_06245;Dbxref=NCBI_GP:TGE11298.1;Name=TGE11298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456731.1;locus_tag=C9F07_06245;product=multidrug resistance outer membrane protein MdtQ;protein_id=TGE11298.1;transl_table=11 PYKI01000712.1 Genbank gene 2560 2643 . + . ID=gene-C9F07_06250;Name=C9F07_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06250 PYKI01000712.1 Protein Homology CDS 2560 2643 . + 0 ID=cds-TGE11299.1;Parent=gene-C9F07_06250;Dbxref=NCBI_GP:TGE11299.1;Name=TGE11299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233574.1;locus_tag=C9F07_06250;product=hypothetical protein;protein_id=TGE11299.1;transl_table=11 PYKI01000712.1 Genbank gene 2701 3447 . - . ID=gene-C9F07_06255;Name=C9F07_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06255 PYKI01000712.1 Protein Homology CDS 2701 3447 . - 0 ID=cds-TGE11300.1;Parent=gene-C9F07_06255;Dbxref=NCBI_GP:TGE11300.1;Name=TGE11300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751902.1;locus_tag=C9F07_06255;product=tRNA dihydrouridine(16) synthase DusC;protein_id=TGE11300.1;transl_table=11 ##sequence-region PYKI01001721.1 1 776 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001721.1 Genbank region 1 776 . + . ID=PYKI01001721.1:1..776;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001721.1 Genbank pseudogene 64 555 . + . ID=gene-C9F07_16465;Name=C9F07_16465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16465;pseudo=true PYKI01001721.1 Protein Homology CDS 64 555 . + 0 ID=cds-C9F07_16465;Parent=gene-C9F07_16465;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454652.1;locus_tag=C9F07_16465;product=family 31 glucosidase;pseudo=true;transl_table=11 ##sequence-region PYKI01003418.1 1 776 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003418.1 Genbank region 1 776 . + . ID=PYKI01003418.1:1..776;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003418.1 Genbank gene 246 602 . + . ID=gene-C9F07_34380;Name=C9F07_34380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34380 PYKI01003418.1 Protein Homology CDS 246 602 . + 0 ID=cds-TGD33677.1;Parent=gene-C9F07_34380;Dbxref=NCBI_GP:TGD33677.1;Name=TGD33677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458314.1;locus_tag=C9F07_34380;product=endolysin;protein_id=TGD33677.1;transl_table=11 PYKI01003418.1 Genbank pseudogene 608 694 . - . ID=gene-C9F07_34385;Name=C9F07_34385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34385;pseudo=true PYKI01003418.1 Protein Homology CDS 608 694 . - 0 ID=cds-C9F07_34385;Parent=gene-C9F07_34385;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458313.1;locus_tag=C9F07_34385;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01002703.1 1 776 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002703.1 Genbank region 1 776 . + . ID=PYKI01002703.1:1..776;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002703.1 Genbank pseudogene 1 651 . + . ID=gene-C9F07_26965;Name=C9F07_26965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26965;pseudo=true PYKI01002703.1 Protein Homology CDS 1 651 . + 0 ID=cds-C9F07_26965;Parent=gene-C9F07_26965;Note=Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458573.1;locus_tag=C9F07_26965;product=acetyl-coenzyme A synthetase;pseudo=true;transl_table=11 ##sequence-region PYKI01002568.1 1 774 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002568.1 Genbank region 1 774 . + . ID=PYKI01002568.1:1..774;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002568.1 Genbank gene 1 774 . - . ID=gene-C9F07_25490;Name=C9F07_25490;end_range=774,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25490;partial=true;start_range=.,1 PYKI01002568.1 Protein Homology CDS 1 774 . - 0 ID=cds-TGD49818.1;Parent=gene-C9F07_25490;Dbxref=NCBI_GP:TGD49818.1;Name=TGD49818.1;end_range=774,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455751.1;locus_tag=C9F07_25490;partial=true;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=TGD49818.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002741.1 1 773 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002741.1 Genbank region 1 773 . + . ID=PYKI01002741.1:1..773;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002741.1 Genbank gene 1 70 . - . ID=gene-C9F07_27360;Name=C9F07_27360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27360;partial=true;start_range=.,1 PYKI01002741.1 Protein Homology CDS 1 70 . - 0 ID=cds-TGD47133.1;Parent=gene-C9F07_27360;Dbxref=NCBI_GP:TGD47133.1;Name=TGD47133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008787043.1;locus_tag=C9F07_27360;partial=true;product=met regulon transcriptional regulator MetJ;protein_id=TGD47133.1;start_range=.,1;transl_table=11 PYKI01002741.1 Genbank gene 239 773 . + . ID=gene-C9F07_27365;Name=C9F07_27365;end_range=773,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27365;partial=true PYKI01002741.1 Protein Homology CDS 239 773 . + 0 ID=cds-TGD47132.1;Parent=gene-C9F07_27365;Dbxref=NCBI_GP:TGD47132.1;Name=TGD47132.1;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;end_range=773,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457953.1;locus_tag=C9F07_27365;partial=true;product=cystathionine gamma-synthase;protein_id=TGD47132.1;transl_table=11 ##sequence-region PYKI01003107.1 1 773 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003107.1 Genbank region 1 773 . + . ID=PYKI01003107.1:1..773;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003107.1 Genbank gene 1 498 . - . ID=gene-C9F07_31110;Name=C9F07_31110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31110;partial=true;start_range=.,1 PYKI01003107.1 Protein Homology CDS 1 498 . - 0 ID=cds-TGD39579.1;Parent=gene-C9F07_31110;Dbxref=NCBI_GP:TGD39579.1;Name=TGD39579.1;Note=with HisPMQ is involved in the transport of histidine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=C9F07_31110;partial=true;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=TGD39579.1;start_range=.,1;transl_table=11 PYKI01003107.1 Genbank pseudogene 661 773 . - . ID=gene-C9F07_31115;Name=C9F07_31115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31115;pseudo=true PYKI01003107.1 Protein Homology CDS 661 773 . - 2 ID=cds-C9F07_31115;Parent=gene-C9F07_31115;Note=with HisPMQ is involved in the transport of histidine%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506186.1;locus_tag=C9F07_31115;product=histidine ABC transporter substrate-binding protein HisJ;pseudo=true;transl_table=11 ##sequence-region PYKI01001918.1 1 771 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001918.1 Genbank region 1 771 . + . ID=PYKI01001918.1:1..771;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001918.1 Genbank gene 244 771 . - . ID=gene-C9F07_18465;Name=C9F07_18465;end_range=771,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18465;partial=true PYKI01001918.1 Protein Homology CDS 244 771 . - 0 ID=cds-TGD61092.1;Parent=gene-C9F07_18465;Dbxref=NCBI_GP:TGD61092.1;Name=TGD61092.1;Note=with malEFG is involved in import of maltose/maltodextrin;end_range=771,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=C9F07_18465;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGD61092.1;transl_table=11 ##sequence-region PYKI01000426.1 1 770 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000426.1 Genbank region 1 770 . + . ID=PYKI01000426.1:1..770;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000426.1 Genbank gene 3 242 . + . ID=gene-C9F07_03290;Name=C9F07_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03290 PYKI01000426.1 Protein Homology CDS 3 242 . + 0 ID=cds-TGE20837.1;Parent=gene-C9F07_03290;Dbxref=NCBI_GP:TGE20837.1;Name=TGE20837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005948763.1;locus_tag=C9F07_03290;product=D-galactarate dehydratase;protein_id=TGE20837.1;transl_table=11 PYKI01000426.1 Genbank gene 259 770 . + . ID=gene-C9F07_03295;Name=C9F07_03295;end_range=770,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03295;partial=true PYKI01000426.1 Protein Homology CDS 259 770 . + 0 ID=cds-TGE20838.1;Parent=gene-C9F07_03295;Dbxref=NCBI_GP:TGE20838.1;Name=TGE20838.1;end_range=770,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=C9F07_03295;partial=true;product=galactonate dehydratase;protein_id=TGE20838.1;transl_table=11 ##sequence-region PYKI01000455.1 1 770 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000455.1 Genbank region 1 770 . + . ID=PYKI01000455.1:1..770;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000455.1 Genbank gene 1 770 . + . ID=gene-C9F07_03540;Name=C9F07_03540;end_range=770,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03540;partial=true;start_range=.,1 PYKI01000455.1 Protein Homology CDS 1 770 . + 0 ID=cds-TGE19970.1;Parent=gene-C9F07_03540;Dbxref=NCBI_GP:TGE19970.1;Name=TGE19970.1;end_range=770,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458871.1;locus_tag=C9F07_03540;partial=true;product=alpha%2Calpha-phosphotrehalase;protein_id=TGE19970.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002533.1 1 769 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002533.1 Genbank region 1 769 . + . ID=PYKI01002533.1:1..769;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002533.1 Genbank gene 1 269 . + . ID=gene-C9F07_25130;Name=C9F07_25130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25130;partial=true;start_range=.,1 PYKI01002533.1 Protein Homology CDS 1 269 . + 2 ID=cds-TGD50029.1;Parent=gene-C9F07_25130;Dbxref=NCBI_GP:TGD50029.1;Name=TGD50029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456220.1;locus_tag=C9F07_25130;partial=true;product=DUF1315 domain-containing protein;protein_id=TGD50029.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001345.1 1 6502 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001345.1 Genbank region 1 6502 . + . ID=PYKI01001345.1:1..6502;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001345.1 Genbank gene 33 899 . + . ID=gene-C9F07_12580;Name=C9F07_12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12580 PYKI01001345.1 Protein Homology CDS 33 899 . + 0 ID=cds-TGD85274.1;Parent=gene-C9F07_12580;Dbxref=NCBI_GP:TGD85274.1;Name=TGD85274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574653.1;locus_tag=C9F07_12580;product=ADP-ribosylglycohydrolase family protein;protein_id=TGD85274.1;transl_table=11 PYKI01001345.1 Genbank gene 896 1861 . + . ID=gene-C9F07_12585;Name=C9F07_12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12585 PYKI01001345.1 Protein Homology CDS 896 1861 . + 0 ID=cds-TGD85275.1;Parent=gene-C9F07_12585;Dbxref=NCBI_GP:TGD85275.1;Name=TGD85275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456703.1;locus_tag=C9F07_12585;product=sugar kinase;protein_id=TGD85275.1;transl_table=11 PYKI01001345.1 Genbank gene 1835 2581 . - . ID=gene-C9F07_12590;Name=C9F07_12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12590 PYKI01001345.1 Protein Homology CDS 1835 2581 . - 0 ID=cds-TGD85276.1;Parent=gene-C9F07_12590;Dbxref=NCBI_GP:TGD85276.1;Name=TGD85276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456704.1;locus_tag=C9F07_12590;product=GntR family transcriptional regulator;protein_id=TGD85276.1;transl_table=11 PYKI01001345.1 Genbank gene 2618 3418 . - . ID=gene-C9F07_12595;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=C9F07_12595 PYKI01001345.1 Protein Homology CDS 2618 3418 . - 0 ID=cds-TGD85277.1;Parent=gene-C9F07_12595;Dbxref=NCBI_GP:TGD85277.1;Name=TGD85277.1;gbkey=CDS;gene=thiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=C9F07_12595;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=TGD85277.1;transl_table=11 PYKI01001345.1 Genbank gene 3405 4202 . - . ID=gene-C9F07_12600;Name=C9F07_12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12600 PYKI01001345.1 Protein Homology CDS 3405 4202 . - 0 ID=cds-TGD85278.1;Parent=gene-C9F07_12600;Dbxref=NCBI_GP:TGD85278.1;Name=TGD85278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=C9F07_12600;product=hydroxyethylthiazole kinase;protein_id=TGD85278.1;transl_table=11 PYKI01001345.1 cmsearch riboswitch 4234 4330 . - . ID=id-PYKI01001345.1:4234..4330;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00059,COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PYKI01001345.1 Genbank gene 4612 4926 . + . ID=gene-C9F07_12605;Name=C9F07_12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12605 PYKI01001345.1 Protein Homology CDS 4612 4926 . + 0 ID=cds-TGD85279.1;Parent=gene-C9F07_12605;Dbxref=NCBI_GP:TGD85279.1;Name=TGD85279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456707.1;locus_tag=C9F07_12605;product=heavy metal resistance protein;protein_id=TGD85279.1;transl_table=11 PYKI01001345.1 Genbank gene 4968 5975 . - . ID=gene-C9F07_12610;Name=C9F07_12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12610 PYKI01001345.1 Protein Homology CDS 4968 5975 . - 0 ID=cds-TGD85280.1;Parent=gene-C9F07_12610;Dbxref=NCBI_GP:TGD85280.1;Name=TGD85280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269814.1;locus_tag=C9F07_12610;product=hypothetical protein;protein_id=TGD85280.1;transl_table=11 PYKI01001345.1 Genbank pseudogene 5984 6502 . - . ID=gene-C9F07_12615;Name=C9F07_12615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12615;pseudo=true PYKI01001345.1 Protein Homology CDS 5984 6502 . - 0 ID=cds-C9F07_12615;Parent=gene-C9F07_12615;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310942.1;locus_tag=C9F07_12615;product=fimbrial assembly protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002823.1 1 768 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002823.1 Genbank region 1 768 . + . ID=PYKI01002823.1:1..768;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002823.1 Genbank gene 1 768 . - . ID=gene-C9F07_28240;Name=C9F07_28240;end_range=768,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28240;partial=true;start_range=.,1 PYKI01002823.1 Protein Homology CDS 1 768 . - 1 ID=cds-TGD45640.1;Parent=gene-C9F07_28240;Dbxref=NCBI_GP:TGD45640.1;Name=TGD45640.1;end_range=768,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455072.1;locus_tag=C9F07_28240;partial=true;product=hydrophobe/amphiphile efflux-1 family RND transporter;protein_id=TGD45640.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002652.1 1 768 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002652.1 Genbank region 1 768 . + . ID=PYKI01002652.1:1..768;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002652.1 Genbank gene 1 768 . - . ID=gene-C9F07_26405;Name=katE;end_range=768,.;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=C9F07_26405;partial=true;start_range=.,1 PYKI01002652.1 Protein Homology CDS 1 768 . - 2 ID=cds-TGD49364.1;Parent=gene-C9F07_26405;Dbxref=NCBI_GP:TGD49364.1;Name=TGD49364.1;Note=Catalase HPII%3B monofunctional catalase that decomposes hydrogen peroxide into water and oxygen%3B serves to protect cells from the toxic effects of hydrogen peroxide;end_range=768,.;gbkey=CDS;gene=katE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=C9F07_26405;partial=true;product=catalase HPII;protein_id=TGD49364.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002638.1 1 767 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002638.1 Genbank region 1 767 . + . ID=PYKI01002638.1:1..767;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002638.1 Genbank gene 1 379 . - . ID=gene-C9F07_26270;Name=C9F07_26270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26270;partial=true;start_range=.,1 PYKI01002638.1 Protein Homology CDS 1 379 . - 0 ID=cds-TGD49411.1;Parent=gene-C9F07_26270;Dbxref=NCBI_GP:TGD49411.1;Name=TGD49411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=C9F07_26270;partial=true;product=DUF2593 domain-containing protein;protein_id=TGD49411.1;start_range=.,1;transl_table=11 PYKI01002638.1 Genbank pseudogene 453 704 . - . ID=gene-C9F07_26275;Name=C9F07_26275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26275;pseudo=true PYKI01002638.1 Protein Homology CDS 453 704 . - 0 ID=cds-C9F07_26275;Parent=gene-C9F07_26275;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=C9F07_26275;product=putrescine ABC transporter permease PotI;pseudo=true;transl_table=11 ##sequence-region PYKI01002296.1 1 716 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002296.1 Genbank region 1 716 . + . ID=PYKI01002296.1:1..716;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002296.1 Genbank pseudogene 66 491 . - . ID=gene-C9F07_22535;Name=araD;gbkey=Gene;gene=araD;gene_biotype=pseudogene;locus_tag=C9F07_22535;pseudo=true PYKI01002296.1 Protein Homology CDS 66 491 . - 0 ID=cds-C9F07_22535;Parent=gene-C9F07_22535;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=araD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=C9F07_22535;product=L-ribulose-5-phosphate 4-epimerase;pseudo=true;transl_table=11 PYKI01002296.1 Genbank gene 485 716 . - . ID=gene-C9F07_22540;Name=C9F07_22540;end_range=716,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22540;partial=true PYKI01002296.1 Protein Homology CDS 485 716 . - 1 ID=cds-TGD54537.1;Parent=gene-C9F07_22540;Dbxref=NCBI_GP:TGD54537.1;Name=TGD54537.1;Note=L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate;end_range=716,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=C9F07_22540;partial=true;product=xylulose 5-phosphate 3-epimerase;protein_id=TGD54537.1;transl_table=11 ##sequence-region PYKI01000928.1 1 764 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000928.1 Genbank region 1 764 . + . ID=PYKI01000928.1:1..764;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000928.1 Genbank gene 1 764 . - . ID=gene-C9F07_08470;Name=C9F07_08470;end_range=764,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08470;partial=true;start_range=.,1 PYKI01000928.1 Protein Homology CDS 1 764 . - 2 ID=cds-TGE02818.1;Parent=gene-C9F07_08470;Dbxref=NCBI_GP:TGE02818.1;Name=TGE02818.1;end_range=764,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=C9F07_08470;partial=true;product=tetrathionate reductase subunit TtrA;protein_id=TGE02818.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001766.1 1 3439 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001766.1 Genbank region 1 3439 . + . ID=PYKI01001766.1:1..3439;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001766.1 Genbank gene 55 303 . + . ID=gene-C9F07_16950;Name=C9F07_16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16950 PYKI01001766.1 Protein Homology CDS 55 303 . + 0 ID=cds-TGD67984.1;Parent=gene-C9F07_16950;Dbxref=NCBI_GP:TGD67984.1;Name=TGD67984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460511.1;locus_tag=C9F07_16950;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=TGD67984.1;transl_table=11 PYKI01001766.1 Genbank gene 293 577 . + . ID=gene-C9F07_16955;Name=C9F07_16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16955 PYKI01001766.1 Protein Homology CDS 293 577 . + 0 ID=cds-TGD67985.1;Parent=gene-C9F07_16955;Dbxref=NCBI_GP:TGD67985.1;Name=TGD67985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=C9F07_16955;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=TGD67985.1;transl_table=11 PYKI01001766.1 Genbank gene 749 1138 . + . ID=gene-C9F07_16960;Name=C9F07_16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16960 PYKI01001766.1 Protein Homology CDS 749 1138 . + 0 ID=cds-TGD67989.1;Parent=gene-C9F07_16960;Dbxref=NCBI_GP:TGD67989.1;Name=TGD67989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460509.1;locus_tag=C9F07_16960;product=hypothetical protein;protein_id=TGD67989.1;transl_table=11 PYKI01001766.1 Genbank gene 1196 2269 . - . ID=gene-C9F07_16965;Name=C9F07_16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16965 PYKI01001766.1 Protein Homology CDS 1196 2269 . - 0 ID=cds-TGD67986.1;Parent=gene-C9F07_16965;Dbxref=NCBI_GP:TGD67986.1;Name=TGD67986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455938.1;locus_tag=C9F07_16965;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=TGD67986.1;transl_table=11 PYKI01001766.1 Genbank gene 2462 2950 . - . ID=gene-C9F07_16970;Name=C9F07_16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16970 PYKI01001766.1 Protein Homology CDS 2462 2950 . - 0 ID=cds-TGD67987.1;Parent=gene-C9F07_16970;Dbxref=NCBI_GP:TGD67987.1;Name=TGD67987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460507.1;locus_tag=C9F07_16970;product=MarR family transcriptional regulator;protein_id=TGD67987.1;transl_table=11 PYKI01001766.1 Genbank gene 2995 3439 . + . ID=gene-C9F07_16975;Name=C9F07_16975;end_range=3439,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16975;partial=true PYKI01001766.1 Protein Homology CDS 2995 3439 . + 0 ID=cds-TGD67988.1;Parent=gene-C9F07_16975;Dbxref=NCBI_GP:TGD67988.1;Name=TGD67988.1;end_range=3439,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=C9F07_16975;partial=true;product=hypothetical protein;protein_id=TGD67988.1;transl_table=11 ##sequence-region PYKI01001542.1 1 764 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001542.1 Genbank region 1 764 . + . ID=PYKI01001542.1:1..764;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001542.1 Genbank pseudogene 1 678 . - . ID=gene-C9F07_14745;Name=C9F07_14745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14745;pseudo=true PYKI01001542.1 Protein Homology CDS 1 678 . - 0 ID=cds-C9F07_14745;Parent=gene-C9F07_14745;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455093.1;locus_tag=C9F07_14745;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002476.1 1 764 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002476.1 Genbank region 1 764 . + . ID=PYKI01002476.1:1..764;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002476.1 Genbank pseudogene 1 158 . + . ID=gene-C9F07_24450;Name=C9F07_24450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24450;pseudo=true PYKI01002476.1 Protein Homology CDS 1 158 . + 2 ID=cds-C9F07_24450;Parent=gene-C9F07_24450;Note=converts 1%2C4-alpha-D-glucans to maltodextrin%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456524.1;locus_tag=C9F07_24450;product=alpha-amylase;pseudo=true;transl_table=11 PYKI01002476.1 Genbank gene 198 611 . - . ID=gene-C9F07_24455;Name=C9F07_24455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24455 PYKI01002476.1 Protein Homology CDS 198 611 . - 0 ID=cds-TGD50543.1;Parent=gene-C9F07_24455;Dbxref=NCBI_GP:TGD50543.1;Name=TGD50543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456525.1;locus_tag=C9F07_24455;product=lipoprotein;protein_id=TGD50543.1;transl_table=11 ##sequence-region PYKI01002928.1 1 763 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002928.1 Genbank region 1 763 . + . ID=PYKI01002928.1:1..763;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002928.1 Genbank gene 36 683 . + . ID=gene-C9F07_29340;Name=C9F07_29340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29340 PYKI01002928.1 Protein Homology CDS 36 683 . + 0 ID=cds-TGD42836.1;Parent=gene-C9F07_29340;Dbxref=NCBI_GP:TGD42836.1;Name=TGD42836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456096.1;locus_tag=C9F07_29340;product=ribonuclease T;protein_id=TGD42836.1;transl_table=11 ##sequence-region PYKI01002392.1 1 763 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002392.1 Genbank region 1 763 . + . ID=PYKI01002392.1:1..763;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002392.1 Genbank pseudogene 127 326 . + . ID=gene-C9F07_23550;Name=C9F07_23550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23550;pseudo=true PYKI01002392.1 Protein Homology CDS 127 326 . + 0 ID=cds-C9F07_23550;Parent=gene-C9F07_23550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000206206.1;locus_tag=C9F07_23550;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002392.1 Genbank gene 316 648 . + . ID=gene-C9F07_23555;Name=C9F07_23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23555 PYKI01002392.1 Protein Homology CDS 316 648 . + 0 ID=cds-TGD52147.1;Parent=gene-C9F07_23555;Dbxref=NCBI_GP:TGD52147.1;Name=TGD52147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=C9F07_23555;product=DUF1493 domain-containing protein;protein_id=TGD52147.1;transl_table=11 ##sequence-region PYKI01000861.1 1 763 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000861.1 Genbank region 1 763 . + . ID=PYKI01000861.1:1..763;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000861.1 Genbank gene 1 250 . + . ID=gene-C9F07_07885;Name=C9F07_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07885;partial=true;start_range=.,1 PYKI01000861.1 Protein Homology CDS 1 250 . + 1 ID=cds-TGE05779.1;Parent=gene-C9F07_07885;Dbxref=NCBI_GP:TGE05779.1;Name=TGE05779.1;Note=catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=C9F07_07885;partial=true;product=succinylglutamate desuccinylase;protein_id=TGE05779.1;start_range=.,1;transl_table=11 PYKI01000861.1 Genbank gene 287 502 . + . ID=gene-C9F07_07890;Name=C9F07_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07890 PYKI01000861.1 Protein Homology CDS 287 502 . + 0 ID=cds-TGE05780.1;Parent=gene-C9F07_07890;Dbxref=NCBI_GP:TGE05780.1;Name=TGE05780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518805.1;locus_tag=C9F07_07890;product=hypothetical protein;protein_id=TGE05780.1;transl_table=11 PYKI01000861.1 Genbank gene 586 763 . + . ID=gene-C9F07_07895;Name=C9F07_07895;end_range=763,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07895;partial=true PYKI01000861.1 Protein Homology CDS 586 763 . + 0 ID=cds-TGE05781.1;Parent=gene-C9F07_07895;Dbxref=NCBI_GP:TGE05781.1;Name=TGE05781.1;Note=periplasmic protein induced by stress response via Cpx and BaeSR system%3B similar to CpxP;end_range=763,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456204.1;locus_tag=C9F07_07895;partial=true;product=ATP-independent periplasmic protein-refolding chaperone;protein_id=TGE05781.1;transl_table=11 ##sequence-region PYKI01001862.1 1 763 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001862.1 Genbank region 1 763 . + . ID=PYKI01001862.1:1..763;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001862.1 Genbank gene 1 763 . - . ID=gene-C9F07_17900;Name=C9F07_17900;end_range=763,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17900;partial=true;start_range=.,1 PYKI01001862.1 Protein Homology CDS 1 763 . - 2 ID=cds-TGD62971.1;Parent=gene-C9F07_17900;Dbxref=NCBI_GP:TGD62971.1;Name=TGD62971.1;end_range=763,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456911.1;locus_tag=C9F07_17900;partial=true;product=aspartate-semialdehyde dehydrogenase;protein_id=TGD62971.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002491.1 1 762 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002491.1 Genbank region 1 762 . + . ID=PYKI01002491.1:1..762;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002491.1 Genbank gene 1 213 . + . ID=gene-C9F07_24645;Name=C9F07_24645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24645;partial=true;start_range=.,1 PYKI01002491.1 Protein Homology CDS 1 213 . + 0 ID=cds-TGD50368.1;Parent=gene-C9F07_24645;Dbxref=NCBI_GP:TGD50368.1;Name=TGD50368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457507.1;locus_tag=C9F07_24645;partial=true;product=hypothetical protein;protein_id=TGD50368.1;start_range=.,1;transl_table=11 PYKI01002491.1 Genbank gene 319 394 . + . ID=gene-C9F07_24650;Name=C9F07_24650;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_24650 PYKI01002491.1 tRNAscan-SE tRNA 319 394 . + . ID=rna-C9F07_24650;Parent=gene-C9F07_24650;anticodon=(pos:352..354);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_24650;product=tRNA-Phe PYKI01002491.1 tRNAscan-SE exon 319 394 . + . ID=exon-C9F07_24650-1;Parent=rna-C9F07_24650;anticodon=(pos:352..354);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_24650;product=tRNA-Phe PYKI01002491.1 Genbank gene 553 762 . - . ID=gene-C9F07_24655;Name=C9F07_24655;end_range=762,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24655;partial=true PYKI01002491.1 Protein Homology CDS 553 762 . - 0 ID=cds-TGD50369.1;Parent=gene-C9F07_24655;Dbxref=NCBI_GP:TGD50369.1;Name=TGD50369.1;end_range=762,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462032.1;locus_tag=C9F07_24655;partial=true;product=hypothetical protein;protein_id=TGD50369.1;transl_table=11 ##sequence-region PYKI01000386.1 1 762 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000386.1 Genbank region 1 762 . + . ID=PYKI01000386.1:1..762;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000386.1 Genbank pseudogene 38 637 . - . ID=gene-C9F07_02920;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=pseudogene;locus_tag=C9F07_02920;pseudo=true PYKI01000386.1 Protein Homology CDS 38 637 . - 0 ID=cds-C9F07_02920;Parent=gene-C9F07_02920;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=pgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=C9F07_02920;product=two-component system response regulator PgtA;pseudo=true;transl_table=11 PYKI01000386.1 Genbank pseudogene 627 762 . - . ID=gene-C9F07_02925;Name=C9F07_02925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02925;pseudo=true PYKI01000386.1 Protein Homology CDS 627 762 . - 1 ID=cds-C9F07_02925;Parent=gene-C9F07_02925;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456939.1;locus_tag=C9F07_02925;product=histidine kinase;pseudo=true;transl_table=11 ##sequence-region PYKI01000960.1 1 762 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000960.1 Genbank region 1 762 . + . ID=PYKI01000960.1:1..762;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000960.1 Genbank pseudogene 58 696 . + . ID=gene-C9F07_08765;Name=C9F07_08765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08765;pseudo=true PYKI01000960.1 Protein Homology CDS 58 696 . + 0 ID=cds-C9F07_08765;Parent=gene-C9F07_08765;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456810.1;locus_tag=C9F07_08765;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;pseudo=true;transl_table=11 ##sequence-region PYKI01002039.1 1 761 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002039.1 Genbank region 1 761 . + . ID=PYKI01002039.1:1..761;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002039.1 Genbank gene 60 761 . + . ID=gene-C9F07_19715;Name=C9F07_19715;end_range=761,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19715;partial=true PYKI01002039.1 Protein Homology CDS 60 761 . + 0 ID=cds-TGD59999.1;Parent=gene-C9F07_19715;Dbxref=NCBI_GP:TGD59999.1;Name=TGD59999.1;end_range=761,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458108.1;locus_tag=C9F07_19715;partial=true;product=LysR family transcriptional regulator;protein_id=TGD59999.1;transl_table=11 ##sequence-region PYKI01001499.1 1 760 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001499.1 Genbank region 1 760 . + . ID=PYKI01001499.1:1..760;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001499.1 Genbank gene 1 688 . - . ID=gene-C9F07_14270;Name=C9F07_14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14270;partial=true;start_range=.,1 PYKI01001499.1 Protein Homology CDS 1 688 . - 0 ID=cds-TGD78123.1;Parent=gene-C9F07_14270;Dbxref=NCBI_GP:TGD78123.1;Name=TGD78123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456300.1;locus_tag=C9F07_14270;partial=true;product=hydrogenase expression/formation protein;protein_id=TGD78123.1;start_range=.,1;transl_table=11 PYKI01001499.1 Genbank gene 685 760 . - . ID=gene-C9F07_14275;Name=C9F07_14275;end_range=760,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14275;partial=true PYKI01001499.1 Protein Homology CDS 685 760 . - 1 ID=cds-TGD78124.1;Parent=gene-C9F07_14275;Dbxref=NCBI_GP:TGD78124.1;Name=TGD78124.1;Note=involved in processing hydrogenase proteins HyaA and HyaB;end_range=760,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456299.1;locus_tag=C9F07_14275;partial=true;product=hydrogenase-1 operon protein HyaE;protein_id=TGD78124.1;transl_table=11 ##sequence-region PYKI01001789.1 1 760 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001789.1 Genbank region 1 760 . + . ID=PYKI01001789.1:1..760;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001789.1 Genbank pseudogene 339 698 . + . ID=gene-C9F07_17175;Name=C9F07_17175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17175;pseudo=true PYKI01001789.1 Protein Homology CDS 339 698 . + 0 ID=cds-C9F07_17175;Parent=gene-C9F07_17175;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456613.1;locus_tag=C9F07_17175;product=thiosulfate reductase;pseudo=true;transl_table=11 ##sequence-region PYKI01002820.1 1 760 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002820.1 Genbank region 1 760 . + . ID=PYKI01002820.1:1..760;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002820.1 Genbank gene 1 223 . - . ID=gene-C9F07_28215;Name=C9F07_28215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28215;partial=true;start_range=.,1 PYKI01002820.1 Protein Homology CDS 1 223 . - 0 ID=cds-TGD45656.1;Parent=gene-C9F07_28215;Dbxref=NCBI_GP:TGD45656.1;Name=TGD45656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=C9F07_28215;partial=true;product=cytoplasmic protein;protein_id=TGD45656.1;start_range=.,1;transl_table=11 PYKI01002820.1 Genbank gene 238 760 . - . ID=gene-C9F07_28220;Name=C9F07_28220;end_range=760,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28220;partial=true PYKI01002820.1 Protein Homology CDS 238 760 . - 1 ID=cds-TGD45657.1;Parent=gene-C9F07_28220;Dbxref=NCBI_GP:TGD45657.1;Name=TGD45657.1;end_range=760,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457524.1;locus_tag=C9F07_28220;partial=true;product=FAD-dependent oxidoreductase;protein_id=TGD45657.1;transl_table=11 ##sequence-region PYKI01001746.1 1 759 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001746.1 Genbank region 1 759 . + . ID=PYKI01001746.1:1..759;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001746.1 Genbank gene 51 293 . + . ID=gene-C9F07_16765;Name=C9F07_16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16765 PYKI01001746.1 Protein Homology CDS 51 293 . + 0 ID=cds-TGD68315.1;Parent=gene-C9F07_16765;Dbxref=NCBI_GP:TGD68315.1;Name=TGD68315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=C9F07_16765;product=EscE/YscE/SsaE family type III secretion system needle protein co-chaperone;protein_id=TGD68315.1;transl_table=11 PYKI01001746.1 Genbank gene 557 759 . + . ID=gene-C9F07_16770;Name=C9F07_16770;end_range=759,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16770;partial=true PYKI01001746.1 Protein Homology CDS 557 759 . + 0 ID=cds-TGD68316.1;Parent=gene-C9F07_16770;Dbxref=NCBI_GP:TGD68316.1;Name=TGD68316.1;Note=chaperone for SseB and SseD;end_range=759,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456131.1;locus_tag=C9F07_16770;partial=true;product=type III secretion system chaperone SseA;protein_id=TGD68316.1;transl_table=11 ##sequence-region PYKI01001716.1 1 759 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001716.1 Genbank region 1 759 . + . ID=PYKI01001716.1:1..759;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001716.1 Genbank gene 1 486 . - . ID=gene-C9F07_16385;Name=C9F07_16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16385;partial=true;start_range=.,1 PYKI01001716.1 Protein Homology CDS 1 486 . - 0 ID=cds-TGD69100.1;Parent=gene-C9F07_16385;Dbxref=NCBI_GP:TGD69100.1;Name=TGD69100.1;Note=involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=C9F07_16385;partial=true;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=TGD69100.1;start_range=.,1;transl_table=11 PYKI01001716.1 Genbank pseudogene 491 759 . - . ID=gene-C9F07_16390;Name=C9F07_16390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16390;pseudo=true PYKI01001716.1 Protein Homology CDS 491 759 . - 2 ID=cds-C9F07_16390;Parent=gene-C9F07_16390;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=C9F07_16390;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000534.1 1 758 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000534.1 Genbank region 1 758 . + . ID=PYKI01000534.1:1..758;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000534.1 Genbank gene 1 614 . + . ID=gene-C9F07_04435;Name=C9F07_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04435;partial=true;start_range=.,1 PYKI01000534.1 Protein Homology CDS 1 614 . + 2 ID=cds-TGE15773.1;Parent=gene-C9F07_04435;Dbxref=NCBI_GP:TGE15773.1;Name=TGE15773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460783.3;locus_tag=C9F07_04435;partial=true;product=cyclic diguanylate phosphodiesterase;protein_id=TGE15773.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001626.1 1 758 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001626.1 Genbank region 1 758 . + . ID=PYKI01001626.1:1..758;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001626.1 Genbank gene 80 758 . + . ID=gene-C9F07_15525;Name=C9F07_15525;end_range=758,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15525;partial=true PYKI01001626.1 Protein Homology CDS 80 758 . + 0 ID=cds-TGD70586.1;Parent=gene-C9F07_15525;Dbxref=NCBI_GP:TGD70586.1;Name=TGD70586.1;end_range=758,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457531.1;locus_tag=C9F07_15525;partial=true;product=fructuronate reductase;protein_id=TGD70586.1;transl_table=11 ##sequence-region PYKI01000338.1 1 756 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000338.1 Genbank region 1 756 . + . ID=PYKI01000338.1:1..756;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000338.1 Genbank gene 1 330 . - . ID=gene-C9F07_02450;Name=C9F07_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02450;partial=true;start_range=.,1 PYKI01000338.1 Protein Homology CDS 1 330 . - 0 ID=cds-TGE26844.1;Parent=gene-C9F07_02450;Dbxref=NCBI_GP:TGE26844.1;Name=TGE26844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457623.1;locus_tag=C9F07_02450;partial=true;product=DUF805 domain-containing protein;protein_id=TGE26844.1;start_range=.,1;transl_table=11 PYKI01000338.1 Genbank gene 454 753 . - . ID=gene-C9F07_02455;Name=C9F07_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02455 PYKI01000338.1 Protein Homology CDS 454 753 . - 0 ID=cds-TGE26845.1;Parent=gene-C9F07_02455;Dbxref=NCBI_GP:TGE26845.1;Name=TGE26845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000463098.1;locus_tag=C9F07_02455;product=glutathione S-transferase;protein_id=TGE26845.1;transl_table=11 ##sequence-region PYKI01003318.1 1 3423 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003318.1 Genbank region 1 3423 . + . ID=PYKI01003318.1:1..3423;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003318.1 Genbank gene 1 1693 . + . ID=gene-C9F07_33365;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=C9F07_33365;partial=true;start_range=.,1 PYKI01003318.1 Protein Homology CDS 1 1693 . + 1 ID=cds-TGD35962.1;Parent=gene-C9F07_33365;Dbxref=NCBI_GP:TGD35962.1;Name=TGD35962.1;gbkey=CDS;gene=bamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308206.1;locus_tag=C9F07_33365;partial=true;product=outer membrane protein assembly factor BamA;protein_id=TGD35962.1;start_range=.,1;transl_table=11 PYKI01003318.1 Genbank gene 1816 2301 . + . ID=gene-C9F07_33370;Name=C9F07_33370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33370 PYKI01003318.1 Protein Homology CDS 1816 2301 . + 0 ID=cds-TGD35963.1;Parent=gene-C9F07_33370;Dbxref=NCBI_GP:TGD35963.1;Name=TGD35963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454832.1;locus_tag=C9F07_33370;product=chaperone protein Skp;protein_id=TGD35963.1;transl_table=11 PYKI01003318.1 Genbank gene 2305 3330 . + . ID=gene-C9F07_33375;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=C9F07_33375 PYKI01003318.1 Protein Homology CDS 2305 3330 . + 0 ID=cds-TGD35964.1;Parent=gene-C9F07_33375;Dbxref=NCBI_GP:TGD35964.1;Name=TGD35964.1;gbkey=CDS;gene=lpxD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=C9F07_33375;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=TGD35964.1;transl_table=11 PYKI01003318.1 Genbank gene 3346 3423 . + . ID=gene-C9F07_33380;Name=C9F07_33380;end_range=3423,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33380;partial=true PYKI01003318.1 Protein Homology CDS 3346 3423 . + 0 ID=cds-TGD35965.1;Parent=gene-C9F07_33380;Dbxref=NCBI_GP:TGD35965.1;Name=TGD35965.1;end_range=3423,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539056.1;locus_tag=C9F07_33380;partial=true;product=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ;protein_id=TGD35965.1;transl_table=11 ##sequence-region PYKI01001944.1 1 755 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001944.1 Genbank region 1 755 . + . ID=PYKI01001944.1:1..755;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001944.1 Genbank pseudogene 1 675 . - . ID=gene-C9F07_18735;Name=C9F07_18735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18735;pseudo=true PYKI01001944.1 Protein Homology CDS 1 675 . - 0 ID=cds-C9F07_18735;Parent=gene-C9F07_18735;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458865.1;locus_tag=C9F07_18735;product=transcription antiterminator BglG;pseudo=true;transl_table=11 ##sequence-region PYKI01001866.1 1 755 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001866.1 Genbank region 1 755 . + . ID=PYKI01001866.1:1..755;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001866.1 Genbank gene 1 755 . - . ID=gene-C9F07_17970;Name=C9F07_17970;end_range=755,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17970;partial=true;start_range=.,1 PYKI01001866.1 Protein Homology CDS 1 755 . - 2 ID=cds-TGD62824.1;Parent=gene-C9F07_17970;Dbxref=NCBI_GP:TGD62824.1;Name=TGD62824.1;end_range=755,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=C9F07_17970;partial=true;product=formate dehydrogenase;protein_id=TGD62824.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000747.1 1 754 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000747.1 Genbank region 1 754 . + . ID=PYKI01000747.1:1..754;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000747.1 Genbank gene 1 401 . + . ID=gene-C9F07_06595;Name=C9F07_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06595;partial=true;start_range=.,1 PYKI01000747.1 Protein Homology CDS 1 401 . + 2 ID=cds-TGE10717.1;Parent=gene-C9F07_06595;Dbxref=NCBI_GP:TGE10717.1;Name=TGE10717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456869.1;locus_tag=C9F07_06595;partial=true;product=NADH-quinone oxidoreductase subunit B;protein_id=TGE10717.1;start_range=.,1;transl_table=11 PYKI01000747.1 Genbank gene 488 754 . + . ID=gene-C9F07_06600;Name=C9F07_06600;end_range=754,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06600;partial=true PYKI01000747.1 Protein Homology CDS 488 754 . + 0 ID=cds-TGE10718.1;Parent=gene-C9F07_06600;Dbxref=NCBI_GP:TGE10718.1;Name=TGE10718.1;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms;end_range=754,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456868.1;locus_tag=C9F07_06600;partial=true;product=NADH-quinone oxidoreductase subunit C/D;protein_id=TGE10718.1;transl_table=11 ##sequence-region PYKI01000854.1 1 754 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000854.1 Genbank region 1 754 . + . ID=PYKI01000854.1:1..754;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000854.1 Genbank gene 1 404 . + . ID=gene-C9F07_07820;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=C9F07_07820;partial=true;start_range=.,1 PYKI01000854.1 Protein Homology CDS 1 404 . + 2 ID=cds-TGE05967.1;Parent=gene-C9F07_07820;Dbxref=NCBI_GP:TGE05967.1;Name=TGE05967.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457287.1;locus_tag=C9F07_07820;partial=true;product=SPI-1 type III secretion system protein SpaM;protein_id=TGE05967.1;start_range=.,1;transl_table=11 PYKI01000854.1 Genbank gene 404 754 . + . ID=gene-C9F07_07825;Name=C9F07_07825;end_range=754,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07825;partial=true PYKI01000854.1 Protein Homology CDS 404 754 . + 0 ID=cds-TGE05968.1;Parent=gene-C9F07_07825;Dbxref=NCBI_GP:TGE05968.1;Name=TGE05968.1;end_range=754,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457286.1;locus_tag=C9F07_07825;partial=true;product=hypothetical protein;protein_id=TGE05968.1;transl_table=11 ##sequence-region PYKI01000488.1 1 754 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000488.1 Genbank region 1 754 . + . ID=PYKI01000488.1:1..754;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000488.1 Genbank gene 152 754 . + . ID=gene-C9F07_03930;Name=C9F07_03930;end_range=754,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03930;partial=true PYKI01000488.1 Protein Homology CDS 152 754 . + 0 ID=cds-TGE18114.1;Parent=gene-C9F07_03930;Dbxref=NCBI_GP:TGE18114.1;Name=TGE18114.1;end_range=754,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=C9F07_03930;partial=true;product=LPS O-antigen length regulator;protein_id=TGE18114.1;transl_table=11 ##sequence-region PYKI01002810.1 1 752 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002810.1 Genbank region 1 752 . + . ID=PYKI01002810.1:1..752;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002810.1 Genbank gene 1 752 . - . ID=gene-C9F07_28155;Name=dpiB;end_range=752,.;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;gene_synonym=citA;locus_tag=C9F07_28155;partial=true;start_range=.,1 PYKI01002810.1 Protein Homology CDS 1 752 . - 0 ID=cds-TGD45734.1;Parent=gene-C9F07_28155;Dbxref=NCBI_GP:TGD45734.1;Name=TGD45734.1;Note=regulates the expression of citrate fermentation genes;end_range=752,.;gbkey=CDS;gene=dpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455202.1;locus_tag=C9F07_28155;partial=true;product=histidine kinase;protein_id=TGD45734.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002541.1 1 752 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002541.1 Genbank region 1 752 . + . ID=PYKI01002541.1:1..752;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002541.1 Genbank gene 174 458 . - . ID=gene-C9F07_25205;Name=C9F07_25205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25205 PYKI01002541.1 Protein Homology CDS 174 458 . - 0 ID=cds-TGD49983.1;Parent=gene-C9F07_25205;Dbxref=NCBI_GP:TGD49983.1;Name=TGD49983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460445.3;locus_tag=C9F07_25205;product=acid shock protein;protein_id=TGD49983.1;transl_table=11 ##sequence-region PYKI01002053.1 1 752 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002053.1 Genbank region 1 752 . + . ID=PYKI01002053.1:1..752;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002053.1 Genbank gene 1 752 . - . ID=gene-C9F07_19875;Name=C9F07_19875;end_range=752,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19875;partial=true;start_range=.,1 PYKI01002053.1 Protein Homology CDS 1 752 . - 1 ID=cds-TGD59953.1;Parent=gene-C9F07_19875;Dbxref=NCBI_GP:TGD59953.1;Name=TGD59953.1;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;end_range=752,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=C9F07_19875;partial=true;product=ATP-dependent RNA helicase HrpA;protein_id=TGD59953.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002921.1 1 750 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002921.1 Genbank region 1 750 . + . ID=PYKI01002921.1:1..750;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002921.1 Genbank gene 1 308 . + . ID=gene-C9F07_29290;Name=C9F07_29290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29290;partial=true;start_range=.,1 PYKI01002921.1 Protein Homology CDS 1 308 . + 2 ID=cds-TGD43110.1;Parent=gene-C9F07_29290;Dbxref=NCBI_GP:TGD43110.1;Name=TGD43110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000756782.1;locus_tag=C9F07_29290;partial=true;product=fimbrial protein;protein_id=TGD43110.1;start_range=.,1;transl_table=11 PYKI01002921.1 Genbank gene 574 750 . + . ID=gene-C9F07_29295;Name=C9F07_29295;end_range=750,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29295;partial=true PYKI01002921.1 Protein Homology CDS 574 750 . + 0 ID=cds-TGD43111.1;Parent=gene-C9F07_29295;Dbxref=NCBI_GP:TGD43111.1;Name=TGD43111.1;end_range=750,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019793.1;locus_tag=C9F07_29295;partial=true;product=fimbrial chaperone;protein_id=TGD43111.1;transl_table=11 ##sequence-region PYKI01002857.1 1 3404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002857.1 Genbank region 1 3404 . + . ID=PYKI01002857.1:1..3404;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002857.1 Genbank gene 1 1302 . + . ID=gene-C9F07_28595;Name=C9F07_28595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28595;partial=true;start_range=.,1 PYKI01002857.1 Protein Homology CDS 1 1302 . + 0 ID=cds-TGD44990.1;Parent=gene-C9F07_28595;Dbxref=NCBI_GP:TGD44990.1;Name=TGD44990.1;Note=penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=C9F07_28595;partial=true;product=peptidoglycan glycosyltransferase FtsI;protein_id=TGD44990.1;start_range=.,1;transl_table=11 PYKI01002857.1 Genbank gene 1289 2776 . + . ID=gene-C9F07_28600;Name=C9F07_28600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28600 PYKI01002857.1 Protein Homology CDS 1289 2776 . + 0 ID=cds-TGD44991.1;Parent=gene-C9F07_28600;Dbxref=NCBI_GP:TGD44991.1;Name=TGD44991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=C9F07_28600;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=TGD44991.1;transl_table=11 PYKI01002857.1 Genbank gene 2773 3404 . + . ID=gene-C9F07_28605;Name=murF;end_range=3404,.;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=C9F07_28605;partial=true PYKI01002857.1 Protein Homology CDS 2773 3404 . + 0 ID=cds-TGD44992.1;Parent=gene-C9F07_28605;Dbxref=NCBI_GP:TGD44992.1;Name=TGD44992.1;end_range=3404,.;gbkey=CDS;gene=murF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=C9F07_28605;partial=true;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=TGD44992.1;transl_table=11 ##sequence-region PYKI01001812.1 1 750 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001812.1 Genbank region 1 750 . + . ID=PYKI01001812.1:1..750;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001812.1 Genbank pseudogene 67 750 . + . ID=gene-C9F07_17430;Name=C9F07_17430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17430;pseudo=true PYKI01001812.1 Protein Homology CDS 67 750 . + 0 ID=cds-C9F07_17430;Parent=gene-C9F07_17430;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458114.1;locus_tag=C9F07_17430;product=DUF4056 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001122.1 1 749 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001122.1 Genbank region 1 749 . + . ID=PYKI01001122.1:1..749;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001122.1 Genbank gene 12 749 . + . ID=gene-C9F07_10455;Name=C9F07_10455;end_range=749,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10455;partial=true PYKI01001122.1 Protein Homology CDS 12 749 . + 0 ID=cds-TGD94823.1;Parent=gene-C9F07_10455;Dbxref=NCBI_GP:TGD94823.1;Name=TGD94823.1;end_range=749,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129221.1;locus_tag=C9F07_10455;partial=true;product=MFS transporter;protein_id=TGD94823.1;transl_table=11 ##sequence-region PYKI01001016.1 1 748 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001016.1 Genbank region 1 748 . + . ID=PYKI01001016.1:1..748;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001016.1 Genbank gene 32 346 . - . ID=gene-C9F07_09335;Name=C9F07_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09335 PYKI01001016.1 Protein Homology CDS 32 346 . - 0 ID=cds-TGD97592.1;Parent=gene-C9F07_09335;Dbxref=NCBI_GP:TGD97592.1;Name=TGD97592.1;Note=catalyzes the oxidation of menadiol to menadione;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457572.1;locus_tag=C9F07_09335;product=antibiotic biosynthesis monooxygenase;protein_id=TGD97592.1;transl_table=11 PYKI01001016.1 Genbank pseudogene 378 683 . - . ID=gene-C9F07_09340;Name=C9F07_09340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09340;pseudo=true PYKI01001016.1 Protein Homology CDS 378 683 . - 0 ID=cds-C9F07_09340;Parent=gene-C9F07_09340;Note=involved in drug resistance%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=C9F07_09340;product=NADPH quinone reductase MdaB;pseudo=true;transl_table=11 ##sequence-region PYKI01003556.1 1 748 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003556.1 Genbank region 1 748 . + . ID=PYKI01003556.1:1..748;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003556.1 Genbank gene 1 657 . - . ID=gene-C9F07_35910;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=C9F07_35910;partial=true;start_range=.,1 PYKI01003556.1 Protein Homology CDS 1 657 . - 0 ID=cds-TGD30591.1;Parent=gene-C9F07_35910;Dbxref=NCBI_GP:TGD30591.1;Name=TGD30591.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743295.1;locus_tag=C9F07_35910;partial=true;product=DNA polymerase III subunit alpha;protein_id=TGD30591.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001426.1 1 748 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001426.1 Genbank region 1 748 . + . ID=PYKI01001426.1:1..748;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001426.1 Genbank gene 1 701 . - . ID=gene-C9F07_13520;Name=C9F07_13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13520;partial=true;start_range=.,1 PYKI01001426.1 Protein Homology CDS 1 701 . - 0 ID=cds-TGD83721.1;Parent=gene-C9F07_13520;Dbxref=NCBI_GP:TGD83721.1;Name=TGD83721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001413093.1;locus_tag=C9F07_13520;partial=true;product=transcriptional regulator;protein_id=TGD83721.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002108.1 1 746 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002108.1 Genbank region 1 746 . + . ID=PYKI01002108.1:1..746;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002108.1 Genbank pseudogene 35 746 . - . ID=gene-C9F07_20455;Name=C9F07_20455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20455;pseudo=true PYKI01002108.1 Protein Homology CDS 35 746 . - 1 ID=cds-C9F07_20455;Parent=gene-C9F07_20455;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819529.1;locus_tag=C9F07_20455;product=adenylosuccinate lyase;pseudo=true;transl_table=11 ##sequence-region PYKI01000972.1 1 746 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000972.1 Genbank region 1 746 . + . ID=PYKI01000972.1:1..746;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000972.1 Genbank gene 1 161 . - . ID=gene-C9F07_08865;Name=C9F07_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08865;partial=true;start_range=.,1 PYKI01000972.1 Protein Homology CDS 1 161 . - 0 ID=cds-TGD99986.1;Parent=gene-C9F07_08865;Dbxref=NCBI_GP:TGD99986.1;Name=TGD99986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001347307.1;locus_tag=C9F07_08865;partial=true;product=amino acid permease;protein_id=TGD99986.1;start_range=.,1;transl_table=11 PYKI01000972.1 Genbank gene 135 746 . + . ID=gene-C9F07_08870;Name=C9F07_08870;end_range=746,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08870;partial=true PYKI01000972.1 Protein Homology CDS 135 746 . + 0 ID=cds-TGD99985.1;Parent=gene-C9F07_08870;Dbxref=NCBI_GP:TGD99985.1;Name=TGD99985.1;end_range=746,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411622.1;locus_tag=C9F07_08870;partial=true;product=transcriptional regulator;protein_id=TGD99985.1;transl_table=11 ##sequence-region PYKI01002403.1 1 745 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002403.1 Genbank region 1 745 . + . ID=PYKI01002403.1:1..745;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002403.1 Genbank pseudogene 1 345 . - . ID=gene-C9F07_23695;Name=C9F07_23695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23695;pseudo=true PYKI01002403.1 Protein Homology CDS 1 345 . - 0 ID=cds-C9F07_23695;Parent=gene-C9F07_23695;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611140.1;locus_tag=C9F07_23695;product=IS3 family transposase;pseudo=true;transl_table=11 PYKI01002403.1 Genbank gene 469 745 . - . ID=gene-C9F07_23700;Name=C9F07_23700;end_range=745,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23700;partial=true PYKI01002403.1 Protein Homology CDS 469 745 . - 1 ID=cds-TGD51911.1;Parent=gene-C9F07_23700;Dbxref=NCBI_GP:TGD51911.1;Name=TGD51911.1;end_range=745,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008108317.1;locus_tag=C9F07_23700;partial=true;product=GMP synthase (glutamine-hydrolyzing);protein_id=TGD51911.1;transl_table=11 ##sequence-region PYKI01001788.1 1 744 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001788.1 Genbank region 1 744 . + . ID=PYKI01001788.1:1..744;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001788.1 Genbank gene 146 744 . + . ID=gene-C9F07_17170;Name=sgbH;end_range=744,.;gbkey=Gene;gene=sgbH;gene_biotype=protein_coding;locus_tag=C9F07_17170;partial=true PYKI01001788.1 Protein Homology CDS 146 744 . + 0 ID=cds-TGD66664.1;Parent=gene-C9F07_17170;Dbxref=NCBI_GP:TGD66664.1;Name=TGD66664.1;Note=catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate;end_range=744,.;gbkey=CDS;gene=sgbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=C9F07_17170;partial=true;product=3-keto-L-gulonate-6-phosphate decarboxylase;protein_id=TGD66664.1;transl_table=11 ##sequence-region PYKI01003067.1 1 744 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003067.1 Genbank region 1 744 . + . ID=PYKI01003067.1:1..744;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003067.1 Genbank gene 176 744 . + . ID=gene-C9F07_30745;Name=C9F07_30745;end_range=744,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30745;partial=true PYKI01003067.1 Protein Homology CDS 176 744 . + 0 ID=cds-TGD40463.1;Parent=gene-C9F07_30745;Dbxref=NCBI_GP:TGD40463.1;Name=TGD40463.1;end_range=744,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458522.1;locus_tag=C9F07_30745;partial=true;product=hypothetical protein;protein_id=TGD40463.1;transl_table=11 ##sequence-region PYKI01001264.1 1 3402 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001264.1 Genbank region 1 3402 . + . ID=PYKI01001264.1:1..3402;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001264.1 Genbank gene 1 419 . + . ID=gene-C9F07_11825;Name=C9F07_11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11825;partial=true;start_range=.,1 PYKI01001264.1 Protein Homology CDS 1 419 . + 2 ID=cds-TGD88833.1;Parent=gene-C9F07_11825;Dbxref=NCBI_GP:TGD88833.1;Name=TGD88833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454797.1;locus_tag=C9F07_11825;partial=true;product=fimbrial chaperone;protein_id=TGD88833.1;start_range=.,1;transl_table=11 PYKI01001264.1 Genbank gene 440 3085 . + . ID=gene-C9F07_11830;Name=C9F07_11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11830 PYKI01001264.1 Protein Homology CDS 440 3085 . + 0 ID=cds-TGD88834.1;Parent=gene-C9F07_11830;Dbxref=NCBI_GP:TGD88834.1;Name=TGD88834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001566102.1;locus_tag=C9F07_11830;product=outer membrane usher protein;protein_id=TGD88834.1;transl_table=11 PYKI01001264.1 Genbank pseudogene 3072 3266 . + . ID=gene-C9F07_11835;Name=C9F07_11835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11835;pseudo=true PYKI01001264.1 Protein Homology CDS 3072 3266 . + 0 ID=cds-C9F07_11835;Parent=gene-C9F07_11835;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454795.1;locus_tag=C9F07_11835;product=fimbrial protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001865.1 1 744 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001865.1 Genbank region 1 744 . + . ID=PYKI01001865.1:1..744;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001865.1 Genbank gene 1 744 . + . ID=gene-C9F07_17965;Name=C9F07_17965;end_range=744,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17965;partial=true;start_range=.,1 PYKI01001865.1 Protein Homology CDS 1 744 . + 0 ID=cds-TGD62921.1;Parent=gene-C9F07_17965;Dbxref=NCBI_GP:TGD62921.1;Name=TGD62921.1;Note=part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system;end_range=744,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=C9F07_17965;partial=true;product=two-component sensor histidine kinase BarA;protein_id=TGD62921.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001346.1 1 743 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001346.1 Genbank region 1 743 . + . ID=PYKI01001346.1:1..743;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001346.1 Genbank gene 1 525 . + . ID=gene-C9F07_12620;Name=C9F07_12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12620;partial=true;start_range=.,1 PYKI01001346.1 Protein Homology CDS 1 525 . + 0 ID=cds-TGD85273.1;Parent=gene-C9F07_12620;Dbxref=NCBI_GP:TGD85273.1;Name=TGD85273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455883.1;locus_tag=C9F07_12620;partial=true;product=hypothetical protein;protein_id=TGD85273.1;start_range=.,1;transl_table=11 PYKI01001346.1 Genbank pseudogene 539 706 . + . ID=gene-C9F07_12625;Name=C9F07_12625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12625;pseudo=true PYKI01001346.1 Protein Homology CDS 539 706 . + 0 ID=cds-C9F07_12625;Parent=gene-C9F07_12625;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918534.1;locus_tag=C9F07_12625;product=SgcQ protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001054.1 1 742 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001054.1 Genbank region 1 742 . + . ID=PYKI01001054.1:1..742;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001054.1 Genbank gene 1 742 . + . ID=gene-C9F07_09740;Name=C9F07_09740;end_range=742,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09740;partial=true;start_range=.,1 PYKI01001054.1 Protein Homology CDS 1 742 . + 1 ID=cds-TGD96360.1;Parent=gene-C9F07_09740;Dbxref=NCBI_GP:TGD96360.1;Name=TGD96360.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate;end_range=742,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020244583.1;locus_tag=C9F07_09740;partial=true;product=phosphogluconate dehydratase;protein_id=TGD96360.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003518.1 1 742 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003518.1 Genbank region 1 742 . + . ID=PYKI01003518.1:1..742;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003518.1 Genbank gene 1 691 . - . ID=gene-C9F07_35485;Name=C9F07_35485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35485;partial=true;start_range=.,1 PYKI01003518.1 Protein Homology CDS 1 691 . - 0 ID=cds-TGD31544.1;Parent=gene-C9F07_35485;Dbxref=NCBI_GP:TGD31544.1;Name=TGD31544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068855.1;locus_tag=C9F07_35485;partial=true;product=L-cystine transporter;protein_id=TGD31544.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002346.1 1 740 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002346.1 Genbank region 1 740 . + . ID=PYKI01002346.1:1..740;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002346.1 Genbank gene 231 740 . - . ID=gene-C9F07_23060;Name=C9F07_23060;end_range=740,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23060;partial=true PYKI01002346.1 Protein Homology CDS 231 740 . - 0 ID=cds-TGD53401.1;Parent=gene-C9F07_23060;Dbxref=NCBI_GP:TGD53401.1;Name=TGD53401.1;end_range=740,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=C9F07_23060;partial=true;product=hypothetical protein;protein_id=TGD53401.1;transl_table=11 ##sequence-region PYKI01003329.1 1 740 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003329.1 Genbank region 1 740 . + . ID=PYKI01003329.1:1..740;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003329.1 Genbank gene 52 363 . + . ID=gene-C9F07_33480;Name=C9F07_33480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33480 PYKI01003329.1 Protein Homology CDS 52 363 . + 0 ID=cds-TGD35120.1;Parent=gene-C9F07_33480;Dbxref=NCBI_GP:TGD35120.1;Name=TGD35120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257793.1;locus_tag=C9F07_33480;product=hypothetical protein;protein_id=TGD35120.1;transl_table=11 PYKI01003329.1 Genbank gene 414 740 . + . ID=gene-C9F07_33485;Name=C9F07_33485;end_range=740,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33485;partial=true PYKI01003329.1 Protein Homology CDS 414 740 . + 0 ID=cds-TGD35119.1;Parent=gene-C9F07_33485;Dbxref=NCBI_GP:TGD35119.1;Name=TGD35119.1;end_range=740,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455745.1;locus_tag=C9F07_33485;partial=true;product=formyltetrahydrofolate deformylase;protein_id=TGD35119.1;transl_table=11 ##sequence-region PYKI01002505.1 1 738 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002505.1 Genbank region 1 738 . + . ID=PYKI01002505.1:1..738;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002505.1 Genbank gene 1 738 . - . ID=gene-C9F07_24815;Name=C9F07_24815;end_range=738,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24815;partial=true;start_range=.,1 PYKI01002505.1 Protein Homology CDS 1 738 . - 0 ID=cds-TGD50233.1;Parent=gene-C9F07_24815;Dbxref=NCBI_GP:TGD50233.1;Name=TGD50233.1;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;end_range=738,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=C9F07_24815;partial=true;product=energy-dependent translational throttle protein EttA;protein_id=TGD50233.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001524.1 1 737 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001524.1 Genbank region 1 737 . + . ID=PYKI01001524.1:1..737;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001524.1 Genbank gene 144 737 . - . ID=gene-C9F07_14510;Name=C9F07_14510;end_range=737,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14510;partial=true PYKI01001524.1 Protein Homology CDS 144 737 . - 0 ID=cds-TGD76507.1;Parent=gene-C9F07_14510;Dbxref=NCBI_GP:TGD76507.1;Name=TGD76507.1;end_range=737,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455238.1;locus_tag=C9F07_14510;partial=true;product=hypothetical protein;protein_id=TGD76507.1;transl_table=11 ##sequence-region PYKI01000922.1 1 737 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000922.1 Genbank region 1 737 . + . ID=PYKI01000922.1:1..737;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000922.1 Genbank gene 1 405 . - . ID=gene-C9F07_08400;Name=C9F07_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08400;partial=true;start_range=.,1 PYKI01000922.1 Protein Homology CDS 1 405 . - 0 ID=cds-TGE02902.1;Parent=gene-C9F07_08400;Dbxref=NCBI_GP:TGE02902.1;Name=TGE02902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=C9F07_08400;partial=true;product=metalloprotein;protein_id=TGE02902.1;start_range=.,1;transl_table=11 PYKI01000922.1 Genbank gene 426 626 . + . ID=gene-C9F07_08405;Name=C9F07_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08405 PYKI01000922.1 Protein Homology CDS 426 626 . + 0 ID=cds-TGE02903.1;Parent=gene-C9F07_08405;Dbxref=NCBI_GP:TGE02903.1;Name=TGE02903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518962.1;locus_tag=C9F07_08405;product=hypothetical protein;protein_id=TGE02903.1;transl_table=11 PYKI01000922.1 Genbank pseudogene 642 707 . + . ID=gene-C9F07_08410;Name=C9F07_08410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08410;pseudo=true PYKI01000922.1 Protein Homology CDS 642 707 . + 0 ID=cds-C9F07_08410;Parent=gene-C9F07_08410;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001802165.1;locus_tag=C9F07_08410;product=arginyl-tRNA synthetase;pseudo=true;transl_table=11 ##sequence-region PYKI01002877.1 1 3396 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002877.1 Genbank region 1 3396 . + . ID=PYKI01002877.1:1..3396;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002877.1 Genbank gene 1 1667 . + . ID=gene-C9F07_28815;Name=C9F07_28815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28815;partial=true;start_range=.,1 PYKI01002877.1 Protein Homology CDS 1 1667 . + 2 ID=cds-TGD44480.1;Parent=gene-C9F07_28815;Dbxref=NCBI_GP:TGD44480.1;Name=TGD44480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456953.1;locus_tag=C9F07_28815;partial=true;product=hypothetical protein;protein_id=TGD44480.1;start_range=.,1;transl_table=11 PYKI01002877.1 Genbank gene 1720 2922 . - . ID=gene-C9F07_28820;Name=C9F07_28820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28820 PYKI01002877.1 Protein Homology CDS 1720 2922 . - 0 ID=cds-TGD44481.1;Parent=gene-C9F07_28820;Dbxref=NCBI_GP:TGD44481.1;Name=TGD44481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456952.1;locus_tag=C9F07_28820;product=NupC/NupG family nucleoside CNT transporter;protein_id=TGD44481.1;transl_table=11 PYKI01002877.1 Genbank gene 3265 3396 . + . ID=gene-C9F07_28825;Name=C9F07_28825;end_range=3396,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28825;partial=true PYKI01002877.1 Protein Homology CDS 3265 3396 . + 0 ID=cds-TGD44482.1;Parent=gene-C9F07_28825;Dbxref=NCBI_GP:TGD44482.1;Name=TGD44482.1;end_range=3396,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456951.1;locus_tag=C9F07_28825;partial=true;product=divalent metal cation transporter;protein_id=TGD44482.1;transl_table=11 ##sequence-region PYKI01000992.1 1 736 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000992.1 Genbank region 1 736 . + . ID=PYKI01000992.1:1..736;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000992.1 Genbank gene 1 736 . + . ID=gene-C9F07_09060;Name=C9F07_09060;end_range=736,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09060;partial=true;start_range=.,1 PYKI01000992.1 Protein Homology CDS 1 736 . + 0 ID=cds-TGD99134.1;Parent=gene-C9F07_09060;Dbxref=NCBI_GP:TGD99134.1;Name=TGD99134.1;end_range=736,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455422.1;locus_tag=C9F07_09060;partial=true;product=hypothetical protein;protein_id=TGD99134.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000660.1 1 735 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000660.1 Genbank region 1 735 . + . ID=PYKI01000660.1:1..735;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000660.1 Genbank gene 1 203 . - . ID=gene-C9F07_05740;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=C9F07_05740;partial=true;start_range=.,1 PYKI01000660.1 Protein Homology CDS 1 203 . - 0 ID=cds-TGE12079.1;Parent=gene-C9F07_05740;Dbxref=NCBI_GP:TGE12079.1;Name=TGE12079.1;gbkey=CDS;gene=atpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=C9F07_05740;partial=true;product=ATP synthase F1 subunit epsilon;protein_id=TGE12079.1;start_range=.,1;transl_table=11 PYKI01000660.1 Genbank gene 224 735 . - . ID=gene-C9F07_05745;Name=C9F07_05745;end_range=735,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05745;partial=true PYKI01000660.1 Protein Homology CDS 224 735 . - 2 ID=cds-TGE12080.1;Parent=gene-C9F07_05745;Dbxref=NCBI_GP:TGE12080.1;Name=TGE12080.1;end_range=735,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458078.1;locus_tag=C9F07_05745;partial=true;product=F0F1 ATP synthase subunit beta;protein_id=TGE12080.1;transl_table=11 ##sequence-region PYKI01000862.1 1 735 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000862.1 Genbank region 1 735 . + . ID=PYKI01000862.1:1..735;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000862.1 Genbank pseudogene 1 651 . - . ID=gene-C9F07_07900;Name=C9F07_07900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07900;pseudo=true PYKI01000862.1 Protein Homology CDS 1 651 . - 0 ID=cds-C9F07_07900;Parent=gene-C9F07_07900;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456442.1;locus_tag=C9F07_07900;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002901.1 1 734 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002901.1 Genbank region 1 734 . + . ID=PYKI01002901.1:1..734;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002901.1 Genbank pseudogene 532 729 . - . ID=gene-C9F07_29060;Name=C9F07_29060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29060;pseudo=true PYKI01002901.1 Protein Homology CDS 532 729 . - 0 ID=cds-C9F07_29060;Parent=gene-C9F07_29060;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989317.1;locus_tag=C9F07_29060;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001793.1 1 734 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001793.1 Genbank region 1 734 . + . ID=PYKI01001793.1:1..734;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001793.1 Genbank gene 11 529 . - . ID=gene-C9F07_17235;Name=C9F07_17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17235 PYKI01001793.1 Protein Homology CDS 11 529 . - 0 ID=cds-TGD66523.1;Parent=gene-C9F07_17235;Dbxref=NCBI_GP:TGD66523.1;Name=TGD66523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003922670.1;locus_tag=C9F07_17235;product=L-serine dehydratase;protein_id=TGD66523.1;transl_table=11 PYKI01001793.1 Genbank gene 599 734 . - . ID=gene-C9F07_17240;Name=C9F07_17240;end_range=734,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17240;partial=true PYKI01001793.1 Protein Homology CDS 599 734 . - 1 ID=cds-TGD66524.1;Parent=gene-C9F07_17240;Dbxref=NCBI_GP:TGD66524.1;Name=TGD66524.1;end_range=734,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457629.1;locus_tag=C9F07_17240;partial=true;product=keto-acid formate acetyltransferase;protein_id=TGD66524.1;transl_table=11 ##sequence-region PYKI01000278.1 1 715 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000278.1 Genbank region 1 715 . + . ID=PYKI01000278.1:1..715;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000278.1 Genbank gene 1 524 . - . ID=gene-C9F07_01810;Name=C9F07_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01810;partial=true;start_range=.,1 PYKI01000278.1 Protein Homology CDS 1 524 . - 0 ID=cds-TGE27829.1;Parent=gene-C9F07_01810;Dbxref=NCBI_GP:TGE27829.1;Name=TGE27829.1;Note=penicillin-insensitive transglycosylase/transpeptidase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=C9F07_01810;partial=true;product=penicillin-binding protein 1C;protein_id=TGE27829.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001375.1 1 733 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001375.1 Genbank region 1 733 . + . ID=PYKI01001375.1:1..733;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001375.1 Genbank pseudogene 70 360 . - . ID=gene-C9F07_12930;Name=C9F07_12930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12930;pseudo=true PYKI01001375.1 Protein Homology CDS 70 360 . - 0 ID=cds-C9F07_12930;Parent=gene-C9F07_12930;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000773469.1;locus_tag=C9F07_12930;product=transcriptional regulator;pseudo=true;transl_table=11 PYKI01001375.1 Genbank gene 550 733 . + . ID=gene-C9F07_12935;Name=C9F07_12935;end_range=733,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12935;partial=true PYKI01001375.1 Protein Homology CDS 550 733 . + 0 ID=cds-TGD84484.1;Parent=gene-C9F07_12935;Dbxref=NCBI_GP:TGD84484.1;Name=TGD84484.1;end_range=733,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519626.1;locus_tag=C9F07_12935;partial=true;product=hypothetical protein;protein_id=TGD84484.1;transl_table=11 ##sequence-region PYKI01000755.1 1 731 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000755.1 Genbank region 1 731 . + . ID=PYKI01000755.1:1..731;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000755.1 Genbank pseudogene 70 731 . + . ID=gene-C9F07_06670;Name=C9F07_06670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06670;pseudo=true PYKI01000755.1 Protein Homology CDS 70 731 . + 0 ID=cds-C9F07_06670;Parent=gene-C9F07_06670;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456143.1;locus_tag=C9F07_06670;product=tetrathionate reductase subunit TtrC;pseudo=true;transl_table=11 ##sequence-region PYKI01002484.1 1 730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002484.1 Genbank region 1 730 . + . ID=PYKI01002484.1:1..730;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002484.1 Genbank gene 1 443 . + . ID=gene-C9F07_24545;Name=C9F07_24545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24545;partial=true;start_range=.,1 PYKI01002484.1 Protein Homology CDS 1 443 . + 2 ID=cds-TGD50444.1;Parent=gene-C9F07_24545;Dbxref=NCBI_GP:TGD50444.1;Name=TGD50444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=C9F07_24545;partial=true;product=response regulator;protein_id=TGD50444.1;start_range=.,1;transl_table=11 PYKI01002484.1 Genbank gene 416 730 . + . ID=gene-C9F07_24550;Name=C9F07_24550;end_range=730,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24550;partial=true PYKI01002484.1 Protein Homology CDS 416 730 . + 0 ID=cds-TGD50445.1;Parent=gene-C9F07_24550;Dbxref=NCBI_GP:TGD50445.1;Name=TGD50445.1;end_range=730,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454945.1;locus_tag=C9F07_24550;partial=true;product=hypothetical protein;protein_id=TGD50445.1;transl_table=11 ##sequence-region PYKI01000541.1 1 730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000541.1 Genbank region 1 730 . + . ID=PYKI01000541.1:1..730;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000541.1 Genbank gene 1 277 . + . ID=gene-C9F07_04490;Name=C9F07_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04490;partial=true;start_range=.,1 PYKI01000541.1 Protein Homology CDS 1 277 . + 1 ID=cds-TGE15595.1;Parent=gene-C9F07_04490;Dbxref=NCBI_GP:TGE15595.1;Name=TGE15595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458579.1;locus_tag=C9F07_04490;partial=true;product=cytochrome C heme lyase;protein_id=TGE15595.1;start_range=.,1;transl_table=11 PYKI01000541.1 Genbank pseudogene 270 710 . + . ID=gene-C9F07_04495;Name=C9F07_04495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04495;pseudo=true PYKI01000541.1 Protein Homology CDS 270 710 . + 0 ID=cds-C9F07_04495;Parent=gene-C9F07_04495;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155376.1;locus_tag=C9F07_04495;product=heme lyase NrfEFG subunit NrfF;pseudo=true;transl_table=11 ##sequence-region PYKI01002263.1 1 730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002263.1 Genbank region 1 730 . + . ID=PYKI01002263.1:1..730;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002263.1 Genbank gene 1 321 . + . ID=gene-C9F07_22135;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=C9F07_22135;partial=true;start_range=.,1 PYKI01002263.1 Protein Homology CDS 1 321 . + 0 ID=cds-TGD55371.1;Parent=gene-C9F07_22135;Dbxref=NCBI_GP:TGD55371.1;Name=TGD55371.1;gbkey=CDS;gene=pcm;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=C9F07_22135;partial=true;product=protein-L-isoaspartate O-methyltransferase;protein_id=TGD55371.1;start_range=.,1;transl_table=11 PYKI01002263.1 Genbank gene 497 730 . + . ID=gene-C9F07_22140;Name=nlpD;end_range=730,.;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=C9F07_22140;partial=true PYKI01002263.1 Protein Homology CDS 497 730 . + 0 ID=cds-TGD55372.1;Parent=gene-C9F07_22140;Dbxref=NCBI_GP:TGD55372.1;Name=TGD55372.1;Note=outer membrane lipoprotein involved in stationary-phase cell survival%3B similar to LppB virulence determinant from Haemophilus somnus;end_range=730,.;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=C9F07_22140;partial=true;product=murein hydrolase activator NlpD;protein_id=TGD55372.1;transl_table=11 ##sequence-region PYKI01002451.1 1 730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002451.1 Genbank region 1 730 . + . ID=PYKI01002451.1:1..730;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002451.1 Genbank gene 1 730 . - . ID=gene-C9F07_24220;Name=argF;end_range=730,.;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=C9F07_24220;partial=true;start_range=.,1 PYKI01002451.1 Protein Homology CDS 1 730 . - 1 ID=cds-TGD50900.1;Parent=gene-C9F07_24220;Dbxref=NCBI_GP:TGD50900.1;Name=TGD50900.1;end_range=730,.;gbkey=CDS;gene=argF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=C9F07_24220;partial=true;product=ornithine carbamoyltransferase;protein_id=TGD50900.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001311.1 1 730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001311.1 Genbank region 1 730 . + . ID=PYKI01001311.1:1..730;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001311.1 Genbank gene 1 730 . - . ID=gene-C9F07_12270;Name=C9F07_12270;end_range=730,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12270;partial=true;start_range=.,1 PYKI01001311.1 Protein Homology CDS 1 730 . - 0 ID=cds-TGD86625.1;Parent=gene-C9F07_12270;Dbxref=NCBI_GP:TGD86625.1;Name=TGD86625.1;end_range=730,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=C9F07_12270;partial=true;product=lipid III flippase WzxE;protein_id=TGD86625.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001871.1 1 730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001871.1 Genbank region 1 730 . + . ID=PYKI01001871.1:1..730;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001871.1 Genbank gene 1 659 . + . ID=gene-C9F07_18005;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=C9F07_18005;partial=true;start_range=.,1 PYKI01001871.1 Protein Homology CDS 1 659 . + 2 ID=cds-TGD62606.1;Parent=gene-C9F07_18005;Dbxref=NCBI_GP:TGD62606.1;Name=TGD62606.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454748.1;locus_tag=C9F07_18005;partial=true;product=preprotein translocase subunit SecA;protein_id=TGD62606.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001215.1 1 728 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001215.1 Genbank region 1 728 . + . ID=PYKI01001215.1:1..728;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001215.1 Genbank gene 34 105 . - . ID=gene-C9F07_11375;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=C9F07_11375 PYKI01001215.1 Protein Homology CDS 34 105 . - 0 ID=cds-TGD91285.1;Parent=gene-C9F07_11375;Dbxref=NCBI_GP:TGD91285.1;Name=TGD91285.1;gbkey=CDS;gene=ypdK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=C9F07_11375;product=membrane protein YpdK;protein_id=TGD91285.1;transl_table=11 PYKI01001215.1 Genbank gene 508 728 . - . ID=gene-C9F07_11380;Name=C9F07_11380;end_range=728,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11380;partial=true PYKI01001215.1 Protein Homology CDS 508 728 . - 2 ID=cds-TGD91286.1;Parent=gene-C9F07_11380;Dbxref=NCBI_GP:TGD91286.1;Name=TGD91286.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock;end_range=728,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456943.1;locus_tag=C9F07_11380;partial=true;product=lipid A biosynthesis palmitoleoyl acyltransferase;protein_id=TGD91286.1;transl_table=11 ##sequence-region PYKI01002989.1 1 728 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002989.1 Genbank region 1 728 . + . ID=PYKI01002989.1:1..728;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002989.1 Genbank gene 52 728 . + . ID=gene-C9F07_30005;Name=C9F07_30005;end_range=728,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30005;partial=true PYKI01002989.1 Protein Homology CDS 52 728 . + 0 ID=cds-TGD41356.1;Parent=gene-C9F07_30005;Dbxref=NCBI_GP:TGD41356.1;Name=TGD41356.1;end_range=728,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=C9F07_30005;partial=true;product=MOSC domain-containing protein;protein_id=TGD41356.1;transl_table=11 ##sequence-region PYKI01001736.1 1 728 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001736.1 Genbank region 1 728 . + . ID=PYKI01001736.1:1..728;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001736.1 Genbank gene 1 728 . + . ID=gene-C9F07_16595;Name=hflB;end_range=728,.;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=C9F07_16595;partial=true;start_range=.,1 PYKI01001736.1 Protein Homology CDS 1 728 . + 0 ID=cds-TGD68672.1;Parent=gene-C9F07_16595;Dbxref=NCBI_GP:TGD68672.1;Name=TGD68672.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;end_range=728,.;gbkey=CDS;gene=hflB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=C9F07_16595;partial=true;product=ATP-dependent metalloprotease;protein_id=TGD68672.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002114.1 1 728 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002114.1 Genbank region 1 728 . + . ID=PYKI01002114.1:1..728;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002114.1 Genbank gene 1 515 . - . ID=gene-C9F07_20490;Name=C9F07_20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20490;partial=true;start_range=.,1 PYKI01002114.1 Protein Homology CDS 1 515 . - 0 ID=cds-TGD58333.1;Parent=gene-C9F07_20490;Dbxref=NCBI_GP:TGD58333.1;Name=TGD58333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=C9F07_20490;partial=true;product=alpha-2-macroglobulin;protein_id=TGD58333.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000177.1 1 728 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000177.1 Genbank region 1 728 . + . ID=PYKI01000177.1:1..728;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000177.1 Genbank gene 151 728 . + . ID=gene-C9F07_01210;Name=C9F07_01210;end_range=728,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01210;partial=true PYKI01000177.1 Protein Homology CDS 151 728 . + 0 ID=cds-TGE30049.1;Parent=gene-C9F07_01210;Dbxref=NCBI_GP:TGE30049.1;Name=TGE30049.1;Note=part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins;end_range=728,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454831.1;locus_tag=C9F07_01210;partial=true;product=outer membrane protein assembly factor BamA;protein_id=TGE30049.1;transl_table=11 ##sequence-region PYKI01001790.1 1 3388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001790.1 Genbank region 1 3388 . + . ID=PYKI01001790.1:1..3388;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001790.1 Genbank gene 1 266 . - . ID=gene-C9F07_17180;Name=C9F07_17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17180;partial=true;start_range=.,1 PYKI01001790.1 Protein Homology CDS 1 266 . - 0 ID=cds-TGD66659.1;Parent=gene-C9F07_17180;Dbxref=NCBI_GP:TGD66659.1;Name=TGD66659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312284.1;locus_tag=C9F07_17180;partial=true;product=hypothetical protein;protein_id=TGD66659.1;start_range=.,1;transl_table=11 PYKI01001790.1 Genbank gene 643 1218 . - . ID=gene-C9F07_17185;Name=C9F07_17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17185 PYKI01001790.1 Protein Homology CDS 643 1218 . - 0 ID=cds-TGD66660.1;Parent=gene-C9F07_17185;Dbxref=NCBI_GP:TGD66660.1;Name=TGD66660.1;Note=cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=C9F07_17185;product=Fe-S biogenesis protein NfuA;protein_id=TGD66660.1;transl_table=11 PYKI01001790.1 Genbank gene 1277 1960 . - . ID=gene-C9F07_17190;Name=C9F07_17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17190 PYKI01001790.1 Protein Homology CDS 1277 1960 . - 0 ID=cds-TGD66661.1;Parent=gene-C9F07_17190;Dbxref=NCBI_GP:TGD66661.1;Name=TGD66661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=C9F07_17190;product=DNA utilization protein GntX;protein_id=TGD66661.1;transl_table=11 PYKI01001790.1 Genbank gene 1998 2768 . + . ID=gene-C9F07_17195;Name=C9F07_17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17195 PYKI01001790.1 Protein Homology CDS 1998 2768 . + 0 ID=cds-TGD66662.1;Parent=gene-C9F07_17195;Dbxref=NCBI_GP:TGD66662.1;Name=TGD66662.1;Note=Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=C9F07_17195;product=pimeloyl-[acyl-carrier protein] methyl ester esterase;protein_id=TGD66662.1;transl_table=11 PYKI01001790.1 Genbank gene 2804 3388 . - . ID=gene-C9F07_17200;Name=C9F07_17200;end_range=3388,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17200;partial=true PYKI01001790.1 Protein Homology CDS 2804 3388 . - 0 ID=cds-TGD66663.1;Parent=gene-C9F07_17200;Dbxref=NCBI_GP:TGD66663.1;Name=TGD66663.1;end_range=3388,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458396.1;locus_tag=C9F07_17200;partial=true;product=ISNCY family transposase;protein_id=TGD66663.1;transl_table=11 ##sequence-region PYKI01000687.1 1 727 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000687.1 Genbank region 1 727 . + . ID=PYKI01000687.1:1..727;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000687.1 Genbank gene 1 727 . + . ID=gene-C9F07_06000;Name=ampG;end_range=727,.;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=C9F07_06000;partial=true;start_range=.,1 PYKI01000687.1 Protein Homology CDS 1 727 . + 0 ID=cds-TGE11417.1;Parent=gene-C9F07_06000;Dbxref=NCBI_GP:TGE11417.1;Name=TGE11417.1;Note=in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein;end_range=727,.;gbkey=CDS;gene=ampG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455041.1;locus_tag=C9F07_06000;partial=true;product=muropeptide transporter AmpG;protein_id=TGE11417.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003265.1 1 727 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003265.1 Genbank region 1 727 . + . ID=PYKI01003265.1:1..727;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003265.1 Genbank gene 1 727 . - . ID=gene-C9F07_32830;Name=C9F07_32830;end_range=727,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32830;partial=true;start_range=.,1 PYKI01003265.1 Protein Homology CDS 1 727 . - 0 ID=cds-TGD36223.1;Parent=gene-C9F07_32830;Dbxref=NCBI_GP:TGD36223.1;Name=TGD36223.1;end_range=727,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462997.1;locus_tag=C9F07_32830;partial=true;product=AraC family transcriptional regulator;protein_id=TGD36223.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000424.1 1 726 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000424.1 Genbank region 1 726 . + . ID=PYKI01000424.1:1..726;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000424.1 Genbank gene 137 421 . - . ID=gene-C9F07_03280;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=C9F07_03280 PYKI01000424.1 Protein Homology CDS 137 421 . - 0 ID=cds-TGE20841.1;Parent=gene-C9F07_03280;Dbxref=NCBI_GP:TGE20841.1;Name=TGE20841.1;gbkey=CDS;gene=ihfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455469.1;locus_tag=C9F07_03280;product=integration host factor subunit beta;protein_id=TGE20841.1;transl_table=11 ##sequence-region PYKI01003167.1 1 726 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003167.1 Genbank region 1 726 . + . ID=PYKI01003167.1:1..726;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003167.1 Genbank pseudogene 61 690 . - . ID=gene-C9F07_31790;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=pseudogene;locus_tag=C9F07_31790;pseudo=true PYKI01003167.1 Protein Homology CDS 61 690 . - 0 ID=cds-C9F07_31790;Parent=gene-C9F07_31790;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=pheT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=C9F07_31790;product=phenylalanine--tRNA ligase subunit beta;pseudo=true;transl_table=11 ##sequence-region PYKI01001062.1 1 725 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001062.1 Genbank region 1 725 . + . ID=PYKI01001062.1:1..725;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001062.1 Genbank gene 1 684 . + . ID=gene-C9F07_09790;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=C9F07_09790;partial=true;start_range=.,1 PYKI01001062.1 Protein Homology CDS 1 684 . + 0 ID=cds-TGD96222.1;Parent=gene-C9F07_09790;Dbxref=NCBI_GP:TGD96222.1;Name=TGD96222.1;gbkey=CDS;gene=cyoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455040.1;locus_tag=C9F07_09790;partial=true;product=ubiquinol oxidase subunit II;protein_id=TGD96222.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002711.1 1 725 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002711.1 Genbank region 1 725 . + . ID=PYKI01002711.1:1..725;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002711.1 Genbank gene 1 725 . + . ID=gene-C9F07_27035;Name=C9F07_27035;end_range=725,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27035;partial=true;start_range=.,1 PYKI01002711.1 Protein Homology CDS 1 725 . + 1 ID=cds-TGD47872.1;Parent=gene-C9F07_27035;Dbxref=NCBI_GP:TGD47872.1;Name=TGD47872.1;Note=catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein;end_range=725,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454821.1;locus_tag=C9F07_27035;partial=true;product=[protein-PII] uridylyltransferase;protein_id=TGD47872.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001753.1 1 725 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001753.1 Genbank region 1 725 . + . ID=PYKI01001753.1:1..725;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001753.1 Genbank gene 1 246 . - . ID=gene-C9F07_16830;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=C9F07_16830;partial=true;start_range=.,1 PYKI01001753.1 Protein Homology CDS 1 246 . - 0 ID=cds-TGD68148.1;Parent=gene-C9F07_16830;Dbxref=NCBI_GP:TGD68148.1;Name=TGD68148.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=C9F07_16830;partial=true;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=TGD68148.1;start_range=.,1;transl_table=11 PYKI01001753.1 Genbank gene 247 725 . - . ID=gene-C9F07_16835;Name=C9F07_16835;end_range=725,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16835;partial=true PYKI01001753.1 Protein Homology CDS 247 725 . - 2 ID=cds-TGD68149.1;Parent=gene-C9F07_16835;Dbxref=NCBI_GP:TGD68149.1;Name=TGD68149.1;end_range=725,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457753.1;locus_tag=C9F07_16835;partial=true;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=TGD68149.1;transl_table=11 ##sequence-region PYKI01000759.1 1 724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000759.1 Genbank region 1 724 . + . ID=PYKI01000759.1:1..724;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000759.1 Genbank gene 40 724 . + . ID=gene-C9F07_06695;Name=C9F07_06695;end_range=724,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06695;partial=true PYKI01000759.1 Protein Homology CDS 40 724 . + 0 ID=cds-TGE09255.1;Parent=gene-C9F07_06695;Dbxref=NCBI_GP:TGE09255.1;Name=TGE09255.1;end_range=724,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455353.1;locus_tag=C9F07_06695;partial=true;product=hypothetical protein;protein_id=TGE09255.1;transl_table=11 ##sequence-region PYKI01001461.1 1 724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001461.1 Genbank region 1 724 . + . ID=PYKI01001461.1:1..724;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001461.1 Genbank gene 1 724 . + . ID=gene-C9F07_13865;Name=C9F07_13865;end_range=724,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13865;partial=true;start_range=.,1 PYKI01001461.1 Protein Homology CDS 1 724 . + 0 ID=cds-TGD82068.1;Parent=gene-C9F07_13865;Dbxref=NCBI_GP:TGD82068.1;Name=TGD82068.1;end_range=724,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=C9F07_13865;partial=true;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=TGD82068.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000850.1 1 724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000850.1 Genbank region 1 724 . + . ID=PYKI01000850.1:1..724;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000850.1 Genbank gene 1 724 . - . ID=gene-C9F07_07740;Name=C9F07_07740;end_range=724,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07740;partial=true;start_range=.,1 PYKI01000850.1 Protein Homology CDS 1 724 . - 2 ID=cds-TGE05981.1;Parent=gene-C9F07_07740;Dbxref=NCBI_GP:TGE05981.1;Name=TGE05981.1;end_range=724,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456296.1;locus_tag=C9F07_07740;partial=true;product=hydrogenase 2 large subunit;protein_id=TGE05981.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003432.1 1 3378 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003432.1 Genbank region 1 3378 . + . ID=PYKI01003432.1:1..3378;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003432.1 Genbank gene 1 442 . - . ID=gene-C9F07_34475;Name=C9F07_34475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34475;partial=true;start_range=.,1 PYKI01003432.1 Protein Homology CDS 1 442 . - 0 ID=cds-TGD33523.1;Parent=gene-C9F07_34475;Dbxref=NCBI_GP:TGD33523.1;Name=TGD33523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=C9F07_34475;partial=true;product=hypothetical protein;protein_id=TGD33523.1;start_range=.,1;transl_table=11 PYKI01003432.1 Genbank gene 770 2143 . - . ID=gene-C9F07_34480;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=C9F07_34480 PYKI01003432.1 Protein Homology CDS 770 2143 . - 0 ID=cds-TGD33520.1;Parent=gene-C9F07_34480;Dbxref=NCBI_GP:TGD33520.1;Name=TGD33520.1;gbkey=CDS;gene=cobA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=C9F07_34480;product=uroporphyrinogen-III C-methyltransferase;protein_id=TGD33520.1;transl_table=11 PYKI01003432.1 Genbank gene 2155 2964 . - . ID=gene-C9F07_34485;Name=C9F07_34485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34485 PYKI01003432.1 Protein Homology CDS 2155 2964 . - 0 ID=cds-TGD33521.1;Parent=gene-C9F07_34485;Dbxref=NCBI_GP:TGD33521.1;Name=TGD33521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458426.1;locus_tag=C9F07_34485;product=nitrite transporter NirC;protein_id=TGD33521.1;transl_table=11 PYKI01003432.1 Genbank gene 3146 3378 . - . ID=gene-C9F07_34490;Name=nirD;end_range=3378,.;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=C9F07_34490;partial=true PYKI01003432.1 Protein Homology CDS 3146 3378 . - 2 ID=cds-TGD33522.1;Parent=gene-C9F07_34490;Dbxref=NCBI_GP:TGD33522.1;Name=TGD33522.1;Note=involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations;end_range=3378,.;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458427.1;locus_tag=C9F07_34490;partial=true;product=nitrite reductase small subunit;protein_id=TGD33522.1;transl_table=11 ##sequence-region PYKI01000451.1 1 723 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000451.1 Genbank region 1 723 . + . ID=PYKI01000451.1:1..723;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000451.1 Genbank gene 50 723 . + . ID=gene-C9F07_03495;Name=tolQ;end_range=723,.;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=C9F07_03495;partial=true PYKI01000451.1 Protein Homology CDS 50 723 . + 0 ID=cds-TGE19977.1;Parent=gene-C9F07_03495;Dbxref=NCBI_GP:TGE19977.1;Name=TGE19977.1;end_range=723,.;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455301.1;locus_tag=C9F07_03495;partial=true;product=protein TolQ;protein_id=TGE19977.1;transl_table=11 ##sequence-region PYKI01000504.1 1 723 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000504.1 Genbank region 1 723 . + . ID=PYKI01000504.1:1..723;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000504.1 Genbank gene 1 510 . + . ID=gene-C9F07_04110;Name=treF;gbkey=Gene;gene=treF;gene_biotype=protein_coding;locus_tag=C9F07_04110;partial=true;start_range=.,1 PYKI01000504.1 Protein Homology CDS 1 510 . + 0 ID=cds-TGE17234.1;Parent=gene-C9F07_04110;Dbxref=NCBI_GP:TGE17234.1;Name=TGE17234.1;Note=cytoplasmic%3B catalyzes the hydrolysis of trehalose to glucose;gbkey=CDS;gene=treF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458316.1;locus_tag=C9F07_04110;partial=true;product=alpha%2Calpha-trehalase;protein_id=TGE17234.1;start_range=.,1;transl_table=11 PYKI01000504.1 Genbank pseudogene 644 723 . + . ID=gene-C9F07_04115;Name=C9F07_04115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04115;pseudo=true PYKI01000504.1 Protein Homology CDS 644 723 . + 0 ID=cds-C9F07_04115;Parent=gene-C9F07_04115;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011421248.1;locus_tag=C9F07_04115;product=translation initiation factor 2;pseudo=true;transl_table=11 ##sequence-region PYKI01000370.1 1 723 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000370.1 Genbank region 1 723 . + . ID=PYKI01000370.1:1..723;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000370.1 Genbank pseudogene 1 123 . - . ID=gene-C9F07_02800;Name=C9F07_02800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02800;pseudo=true PYKI01000370.1 Protein Homology CDS 1 123 . - 0 ID=cds-C9F07_02800;Parent=gene-C9F07_02800;Note=frameshifted%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001116613.1;locus_tag=C9F07_02800;product=nitrogen fixation protein FixA;pseudo=true;transl_table=11 PYKI01000370.1 Genbank gene 237 723 . + . ID=gene-C9F07_02805;Name=C9F07_02805;end_range=723,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02805;partial=true PYKI01000370.1 Protein Homology CDS 237 723 . + 0 ID=cds-TGE23184.1;Parent=gene-C9F07_02805;Dbxref=NCBI_GP:TGE23184.1;Name=TGE23184.1;end_range=723,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457743.1;locus_tag=C9F07_02805;partial=true;product=HTH-type transcriptional activator AaeR;protein_id=TGE23184.1;transl_table=11 ##sequence-region PYKI01001601.1 1 722 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001601.1 Genbank region 1 722 . + . ID=PYKI01001601.1:1..722;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001601.1 Genbank gene 1 140 . - . ID=gene-C9F07_15285;Name=C9F07_15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15285;partial=true;start_range=.,1 PYKI01001601.1 Protein Homology CDS 1 140 . - 0 ID=cds-TGD71458.1;Parent=gene-C9F07_15285;Dbxref=NCBI_GP:TGD71458.1;Name=TGD71458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=C9F07_15285;partial=true;product=propanediol utilization protein;protein_id=TGD71458.1;start_range=.,1;transl_table=11 PYKI01001601.1 Genbank gene 347 722 . - . ID=gene-C9F07_15290;Name=pduE;end_range=722,.;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=C9F07_15290;partial=true PYKI01001601.1 Protein Homology CDS 347 722 . - 1 ID=cds-TGD71459.1;Parent=gene-C9F07_15290;Dbxref=NCBI_GP:TGD71459.1;Name=TGD71459.1;Note=with pduCD catalyzes the formation of propionaldehyde from 1%2C2-propanediol;end_range=722,.;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=C9F07_15290;partial=true;product=propanediol dehydratase small subunit PduE;protein_id=TGD71459.1;transl_table=11 ##sequence-region PYKI01001406.1 1 722 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001406.1 Genbank region 1 722 . + . ID=PYKI01001406.1:1..722;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001406.1 Genbank gene 1 524 . - . ID=gene-C9F07_13300;Name=C9F07_13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13300;partial=true;start_range=.,1 PYKI01001406.1 Protein Homology CDS 1 524 . - 0 ID=cds-TGD83926.1;Parent=gene-C9F07_13300;Dbxref=NCBI_GP:TGD83926.1;Name=TGD83926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=C9F07_13300;partial=true;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=TGD83926.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001620.1 1 721 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001620.1 Genbank region 1 721 . + . ID=PYKI01001620.1:1..721;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001620.1 Genbank gene 1 579 . + . ID=gene-C9F07_15450;Name=C9F07_15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15450;partial=true;start_range=.,1 PYKI01001620.1 Protein Homology CDS 1 579 . + 0 ID=cds-TGD70684.1;Parent=gene-C9F07_15450;Dbxref=NCBI_GP:TGD70684.1;Name=TGD70684.1;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=C9F07_15450;partial=true;product=primosomal protein N';protein_id=TGD70684.1;start_range=.,1;transl_table=11 PYKI01001620.1 Genbank gene 569 721 . + . ID=gene-C9F07_15455;Name=C9F07_15455;end_range=721,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15455;partial=true PYKI01001620.1 Protein Homology CDS 569 721 . + 0 ID=cds-TGD70685.1;Parent=gene-C9F07_15455;Dbxref=NCBI_GP:TGD70685.1;Name=TGD70685.1;end_range=721,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001594649.1;locus_tag=C9F07_15455;partial=true;product=DNA-binding transcriptional regulator CytR;protein_id=TGD70685.1;transl_table=11 ##sequence-region PYKI01001450.1 1 720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001450.1 Genbank region 1 720 . + . ID=PYKI01001450.1:1..720;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001450.1 Genbank pseudogene 63 257 . - . ID=gene-C9F07_13730;Name=C9F07_13730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13730;pseudo=true PYKI01001450.1 Protein Homology CDS 63 257 . - 0 ID=cds-C9F07_13730;Parent=gene-C9F07_13730;Note=CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456795.1;locus_tag=C9F07_13730;product=cytochrome c biogenesis protein CcmE;pseudo=true;transl_table=11 PYKI01001450.1 Genbank gene 254 466 . - . ID=gene-C9F07_13735;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=C9F07_13735 PYKI01001450.1 Protein Homology CDS 254 466 . - 0 ID=cds-TGD83673.1;Parent=gene-C9F07_13735;Dbxref=NCBI_GP:TGD83673.1;Name=TGD83673.1;gbkey=CDS;gene=ccmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456796.1;locus_tag=C9F07_13735;product=heme exporter protein CcmD;protein_id=TGD83673.1;transl_table=11 PYKI01001450.1 Genbank pseudogene 463 651 . - . ID=gene-C9F07_13740;Name=C9F07_13740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13740;pseudo=true PYKI01001450.1 Protein Homology CDS 463 651 . - 0 ID=cds-C9F07_13740;Parent=gene-C9F07_13740;Note=with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=C9F07_13740;product=heme ABC transporter permease;pseudo=true;transl_table=11 ##sequence-region PYKI01001500.1 1 720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001500.1 Genbank region 1 720 . + . ID=PYKI01001500.1:1..720;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001500.1 Genbank gene 1 156 . + . ID=gene-C9F07_14280;Name=C9F07_14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14280;partial=true;start_range=.,1 PYKI01001500.1 Protein Homology CDS 1 156 . + 0 ID=cds-TGD78121.1;Parent=gene-C9F07_14280;Dbxref=NCBI_GP:TGD78121.1;Name=TGD78121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457767.1;locus_tag=C9F07_14280;partial=true;product=YigZ family protein;protein_id=TGD78121.1;start_range=.,1;transl_table=11 PYKI01001500.1 Genbank gene 195 720 . + . ID=gene-C9F07_14285;Name=C9F07_14285;end_range=720,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14285;partial=true PYKI01001500.1 Protein Homology CDS 195 720 . + 0 ID=cds-TGD78122.1;Parent=gene-C9F07_14285;Dbxref=NCBI_GP:TGD78122.1;Name=TGD78122.1;end_range=720,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=C9F07_14285;partial=true;product=potassium transporter;protein_id=TGD78122.1;transl_table=11 ##sequence-region PYKI01001576.1 1 720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001576.1 Genbank region 1 720 . + . ID=PYKI01001576.1:1..720;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001576.1 Genbank pseudogene 1 254 . + . ID=gene-C9F07_15095;Name=C9F07_15095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15095;pseudo=true PYKI01001576.1 Protein Homology CDS 1 254 . + 2 ID=cds-C9F07_15095;Parent=gene-C9F07_15095;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=C9F07_15095;product=type VI secretion system-associated protein TagK;pseudo=true;transl_table=11 PYKI01001576.1 Genbank gene 241 720 . + . ID=gene-C9F07_15100;Name=C9F07_15100;end_range=720,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15100;partial=true PYKI01001576.1 Protein Homology CDS 241 720 . + 0 ID=cds-TGD72937.1;Parent=gene-C9F07_15100;Dbxref=NCBI_GP:TGD72937.1;Name=TGD72937.1;end_range=720,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=C9F07_15100;partial=true;product=impE family protein;protein_id=TGD72937.1;transl_table=11 ##sequence-region PYKI01001798.1 1 3377 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001798.1 Genbank region 1 3377 . + . ID=PYKI01001798.1:1..3377;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001798.1 Genbank gene 1 86 . - . ID=gene-C9F07_17305;Name=C9F07_17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17305;partial=true;start_range=.,1 PYKI01001798.1 Protein Homology CDS 1 86 . - 0 ID=cds-TGD65915.1;Parent=gene-C9F07_17305;Dbxref=NCBI_GP:TGD65915.1;Name=TGD65915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458169.1;locus_tag=C9F07_17305;partial=true;product=EamA family transporter;protein_id=TGD65915.1;start_range=.,1;transl_table=11 PYKI01001798.1 Genbank gene 593 1288 . + . ID=gene-C9F07_17310;Name=C9F07_17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17310 PYKI01001798.1 Protein Homology CDS 593 1288 . + 0 ID=cds-TGD65913.1;Parent=gene-C9F07_17310;Dbxref=NCBI_GP:TGD65913.1;Name=TGD65913.1;Note=may activate Na/K-ATPase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458170.1;locus_tag=C9F07_17310;product=protein MgtC;protein_id=TGD65913.1;transl_table=11 PYKI01001798.1 Genbank gene 1508 3377 . + . ID=gene-C9F07_17315;Name=mgtA;end_range=3377,.;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=C9F07_17315;partial=true PYKI01001798.1 Protein Homology CDS 1508 3377 . + 0 ID=cds-TGD65914.1;Parent=gene-C9F07_17315;Dbxref=NCBI_GP:TGD65914.1;Name=TGD65914.1;end_range=3377,.;gbkey=CDS;gene=mgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=C9F07_17315;partial=true;product=magnesium-translocating P-type ATPase;protein_id=TGD65914.1;transl_table=11 ##sequence-region PYKI01000339.1 1 6467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000339.1 Genbank region 1 6467 . + . ID=PYKI01000339.1:1..6467;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000339.1 Genbank gene 1 365 . - . ID=gene-C9F07_02460;Name=C9F07_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02460;partial=true;start_range=.,1 PYKI01000339.1 Protein Homology CDS 1 365 . - 0 ID=cds-TGE26837.1;Parent=gene-C9F07_02460;Dbxref=NCBI_GP:TGE26837.1;Name=TGE26837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=C9F07_02460;partial=true;product=ribosome recycling factor;protein_id=TGE26837.1;start_range=.,1;transl_table=11 PYKI01000339.1 Genbank gene 512 1237 . - . ID=gene-C9F07_02465;Name=C9F07_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02465 PYKI01000339.1 Protein Homology CDS 512 1237 . - 0 ID=cds-TGE26838.1;Parent=gene-C9F07_02465;Dbxref=NCBI_GP:TGE26838.1;Name=TGE26838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=C9F07_02465;product=UMP kinase;protein_id=TGE26838.1;transl_table=11 PYKI01000339.1 Genbank gene 1382 2233 . - . ID=gene-C9F07_02470;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=C9F07_02470 PYKI01000339.1 Protein Homology CDS 1382 2233 . - 0 ID=cds-TGE26839.1;Parent=gene-C9F07_02470;Dbxref=NCBI_GP:TGE26839.1;Name=TGE26839.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=C9F07_02470;product=elongation factor Ts;protein_id=TGE26839.1;transl_table=11 PYKI01000339.1 Genbank pseudogene 2253 2539 . + . ID=gene-C9F07_02475;Name=C9F07_02475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02475;pseudo=true PYKI01000339.1 Protein Homology CDS 2253 2539 . + 0 ID=cds-C9F07_02475;Parent=gene-C9F07_02475;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001408260.1;locus_tag=C9F07_02475;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000339.1 Genbank gene 2491 3216 . - . ID=gene-C9F07_02480;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=C9F07_02480 PYKI01000339.1 Protein Homology CDS 2491 3216 . - 0 ID=cds-TGE26840.1;Parent=gene-C9F07_02480;Dbxref=NCBI_GP:TGE26840.1;Name=TGE26840.1;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=C9F07_02480;product=30S ribosomal protein S2;protein_id=TGE26840.1;transl_table=11 PYKI01000339.1 Genbank gene 3667 4461 . + . ID=gene-C9F07_02485;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=C9F07_02485 PYKI01000339.1 Protein Homology CDS 3667 4461 . + 0 ID=cds-TGE26841.1;Parent=gene-C9F07_02485;Dbxref=NCBI_GP:TGE26841.1;Name=TGE26841.1;gbkey=CDS;gene=map;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454822.1;locus_tag=C9F07_02485;product=type I methionyl aminopeptidase;protein_id=TGE26841.1;transl_table=11 PYKI01000339.1 Genbank gene 4362 4610 . - . ID=gene-C9F07_02490;Name=C9F07_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02490 PYKI01000339.1 Protein Homology CDS 4362 4610 . - 0 ID=cds-TGE26842.1;Parent=gene-C9F07_02490;Dbxref=NCBI_GP:TGE26842.1;Name=TGE26842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478351.1;locus_tag=C9F07_02490;product=hypothetical protein;protein_id=TGE26842.1;transl_table=11 PYKI01000339.1 Genbank gene 4699 6467 . + . ID=gene-C9F07_02495;Name=glnD;end_range=6467,.;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=C9F07_02495;partial=true PYKI01000339.1 Protein Homology CDS 4699 6467 . + 0 ID=cds-TGE26843.1;Parent=gene-C9F07_02495;Dbxref=NCBI_GP:TGE26843.1;Name=TGE26843.1;end_range=6467,.;gbkey=CDS;gene=glnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=C9F07_02495;partial=true;product=[protein-PII] uridylyltransferase;protein_id=TGE26843.1;transl_table=11 ##sequence-region PYKI01001514.1 1 718 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001514.1 Genbank region 1 718 . + . ID=PYKI01001514.1:1..718;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001514.1 Genbank pseudogene 65 622 . - . ID=gene-C9F07_14440;Name=C9F07_14440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14440;pseudo=true PYKI01001514.1 Protein Homology CDS 65 622 . - 0 ID=cds-C9F07_14440;Parent=gene-C9F07_14440;Note=catalyzes the oxidation of formate to carbon dioxide and molecular hydrogen%3B formate hydrogenlyase comprises of a formate dehydrogenase%2C unidentified electron carriers and a hydrogenase (subunit 3)%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002413736.1;locus_tag=C9F07_14440;product=formate hydrogenlyase subunit 3;pseudo=true;transl_table=11 ##sequence-region PYKI01001064.1 1 717 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001064.1 Genbank region 1 717 . + . ID=PYKI01001064.1:1..717;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001064.1 Genbank gene 99 341 . + . ID=gene-C9F07_09805;Name=C9F07_09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09805 PYKI01001064.1 Protein Homology CDS 99 341 . + 0 ID=cds-TGD96116.1;Parent=gene-C9F07_09805;Dbxref=NCBI_GP:TGD96116.1;Name=TGD96116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456192.1;locus_tag=C9F07_09805;product=cell division activator CedA;protein_id=TGD96116.1;transl_table=11 PYKI01001064.1 Genbank gene 443 717 . - . ID=gene-C9F07_09810;Name=C9F07_09810;end_range=717,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09810;partial=true PYKI01001064.1 Protein Homology CDS 443 717 . - 2 ID=cds-TGD96117.1;Parent=gene-C9F07_09810;Dbxref=NCBI_GP:TGD96117.1;Name=TGD96117.1;end_range=717,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456191.1;locus_tag=C9F07_09810;partial=true;product=L-cystine transporter;protein_id=TGD96117.1;transl_table=11 ##sequence-region PYKI01002345.1 1 716 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002345.1 Genbank region 1 716 . + . ID=PYKI01002345.1:1..716;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002345.1 Genbank gene 68 716 . - . ID=gene-C9F07_23055;Name=citC;end_range=716,.;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=C9F07_23055;partial=true PYKI01002345.1 Protein Homology CDS 68 716 . - 1 ID=cds-TGD53404.1;Parent=gene-C9F07_23055;Dbxref=NCBI_GP:TGD53404.1;Name=TGD53404.1;end_range=716,.;gbkey=CDS;gene=citC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455201.1;locus_tag=C9F07_23055;partial=true;product=[citrate (pro-3S)-lyase] ligase;protein_id=TGD53404.1;transl_table=11 ##sequence-region PYKI01001831.1 1 715 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001831.1 Genbank region 1 715 . + . ID=PYKI01001831.1:1..715;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001831.1 Genbank gene 1 715 . + . ID=gene-C9F07_17605;Name=C9F07_17605;end_range=715,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17605;partial=true;start_range=.,1 PYKI01001831.1 Protein Homology CDS 1 715 . + 1 ID=cds-TGD64277.1;Parent=gene-C9F07_17605;Dbxref=NCBI_GP:TGD64277.1;Name=TGD64277.1;Note=catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan;end_range=715,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458990.3;locus_tag=C9F07_17605;partial=true;product=murein transglycosylase;protein_id=TGD64277.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002009.1 1 715 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002009.1 Genbank region 1 715 . + . ID=PYKI01002009.1:1..715;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002009.1 Genbank gene 1 715 . - . ID=gene-C9F07_19380;Name=C9F07_19380;end_range=715,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19380;partial=true;start_range=.,1 PYKI01002009.1 Protein Homology CDS 1 715 . - 2 ID=cds-TGD60118.1;Parent=gene-C9F07_19380;Dbxref=NCBI_GP:TGD60118.1;Name=TGD60118.1;end_range=715,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=C9F07_19380;partial=true;product=hypothetical protein;protein_id=TGD60118.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003033.1 1 715 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003033.1 Genbank region 1 715 . + . ID=PYKI01003033.1:1..715;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003033.1 Genbank pseudogene 85 585 . + . ID=gene-C9F07_30445;Name=C9F07_30445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30445;pseudo=true PYKI01003033.1 Protein Homology CDS 85 585 . + 0 ID=cds-C9F07_30445;Parent=gene-C9F07_30445;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455388.1;locus_tag=C9F07_30445;product=oxidoreductase;pseudo=true;transl_table=11 PYKI01003033.1 Genbank gene 582 715 . - . ID=gene-C9F07_30450;Name=C9F07_30450;end_range=715,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30450;partial=true PYKI01003033.1 Protein Homology CDS 582 715 . - 2 ID=cds-TGD41076.1;Parent=gene-C9F07_30450;Dbxref=NCBI_GP:TGD41076.1;Name=TGD41076.1;end_range=715,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=C9F07_30450;partial=true;product=glutathione S-transferase;protein_id=TGD41076.1;transl_table=11 ##sequence-region PYKI01000971.1 1 714 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000971.1 Genbank region 1 714 . + . ID=PYKI01000971.1:1..714;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000971.1 Genbank pseudogene 71 714 . + . ID=gene-C9F07_08860;Name=C9F07_08860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08860;pseudo=true PYKI01000971.1 Protein Homology CDS 71 714 . + 0 ID=cds-C9F07_08860;Parent=gene-C9F07_08860;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=C9F07_08860;product=fimbrial assembly protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000951.1 1 713 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000951.1 Genbank region 1 713 . + . ID=PYKI01000951.1:1..713;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000951.1 Genbank pseudogene 39 713 . - . ID=gene-C9F07_08695;Name=C9F07_08695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08695;pseudo=true PYKI01000951.1 Protein Homology CDS 39 713 . - 0 ID=cds-C9F07_08695;Parent=gene-C9F07_08695;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=C9F07_08695;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;pseudo=true;transl_table=11 ##sequence-region PYKI01001492.1 1 712 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001492.1 Genbank region 1 712 . + . ID=PYKI01001492.1:1..712;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001492.1 Genbank pseudogene 1 235 . + . ID=gene-C9F07_14200;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=pseudogene;locus_tag=C9F07_14200;pseudo=true PYKI01001492.1 Protein Homology CDS 1 235 . + 1 ID=cds-C9F07_14200;Parent=gene-C9F07_14200;Note=ABC transporter%2C membrane protein%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=ftsX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=C9F07_14200;product=cell division protein FtsX;pseudo=true;transl_table=11 PYKI01001492.1 Genbank gene 481 712 . + . ID=gene-C9F07_14205;Name=C9F07_14205;end_range=712,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14205;partial=true PYKI01001492.1 Protein Homology CDS 481 712 . + 0 ID=cds-TGD78717.1;Parent=gene-C9F07_14205;Dbxref=NCBI_GP:TGD78717.1;Name=TGD78717.1;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;end_range=712,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458573.1;locus_tag=C9F07_14205;partial=true;product=RNA polymerase sigma factor RpoH;protein_id=TGD78717.1;transl_table=11 ##sequence-region PYKI01001478.1 1 3372 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001478.1 Genbank region 1 3372 . + . ID=PYKI01001478.1:1..3372;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001478.1 Genbank gene 1 598 . + . ID=gene-C9F07_14035;Name=C9F07_14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14035;partial=true;start_range=.,1 PYKI01001478.1 Protein Homology CDS 1 598 . + 1 ID=cds-TGD80072.1;Parent=gene-C9F07_14035;Dbxref=NCBI_GP:TGD80072.1;Name=TGD80072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=C9F07_14035;partial=true;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=TGD80072.1;start_range=.,1;transl_table=11 PYKI01001478.1 Genbank gene 595 924 . + . ID=gene-C9F07_14040;Name=C9F07_14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14040 PYKI01001478.1 Protein Homology CDS 595 924 . + 0 ID=cds-TGD80073.1;Parent=gene-C9F07_14040;Dbxref=NCBI_GP:TGD80073.1;Name=TGD80073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455728.1;locus_tag=C9F07_14040;product=DUF1311 domain-containing protein;protein_id=TGD80073.1;transl_table=11 PYKI01001478.1 Genbank gene 936 1397 . + . ID=gene-C9F07_14045;Name=C9F07_14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14045 PYKI01001478.1 Protein Homology CDS 936 1397 . + 0 ID=cds-TGD80074.1;Parent=gene-C9F07_14045;Dbxref=NCBI_GP:TGD80074.1;Name=TGD80074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455727.1;locus_tag=C9F07_14045;product=NUDIX hydrolase;protein_id=TGD80074.1;transl_table=11 PYKI01001478.1 Genbank gene 1451 2557 . + . ID=gene-C9F07_14050;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=C9F07_14050 PYKI01001478.1 Protein Homology CDS 1451 2557 . + 0 ID=cds-TGD80075.1;Parent=gene-C9F07_14050;Dbxref=NCBI_GP:TGD80075.1;Name=TGD80075.1;gbkey=CDS;gene=mnmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455726.1;locus_tag=C9F07_14050;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=TGD80075.1;transl_table=11 PYKI01001478.1 Genbank gene 2644 3285 . + . ID=gene-C9F07_14055;Name=C9F07_14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14055 PYKI01001478.1 Protein Homology CDS 2644 3285 . + 0 ID=cds-TGD80076.1;Parent=gene-C9F07_14055;Dbxref=NCBI_GP:TGD80076.1;Name=TGD80076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120991.1;locus_tag=C9F07_14055;product=lysogenization protein HflD;protein_id=TGD80076.1;transl_table=11 ##sequence-region PYKI01002051.1 1 711 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002051.1 Genbank region 1 711 . + . ID=PYKI01002051.1:1..711;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002051.1 Genbank gene 1 576 . + . ID=gene-C9F07_19855;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=C9F07_19855;partial=true;start_range=.,1 PYKI01002051.1 Protein Homology CDS 1 576 . + 0 ID=cds-TGD59958.1;Parent=gene-C9F07_19855;Dbxref=NCBI_GP:TGD59958.1;Name=TGD59958.1;gbkey=CDS;gene=ribB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001077009.1;locus_tag=C9F07_19855;partial=true;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=TGD59958.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002253.1 1 711 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002253.1 Genbank region 1 711 . + . ID=PYKI01002253.1:1..711;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002253.1 Genbank gene 1 651 . - . ID=gene-C9F07_22025;Name=C9F07_22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22025;partial=true;start_range=.,1 PYKI01002253.1 Protein Homology CDS 1 651 . - 0 ID=cds-TGD55575.1;Parent=gene-C9F07_22025;Dbxref=NCBI_GP:TGD55575.1;Name=TGD55575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=C9F07_22025;partial=true;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=TGD55575.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000876.1 1 711 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000876.1 Genbank region 1 711 . + . ID=PYKI01000876.1:1..711;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000876.1 Genbank gene 1 218 . + . ID=gene-C9F07_08045;Name=C9F07_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08045;partial=true;start_range=.,1 PYKI01000876.1 Protein Homology CDS 1 218 . + 2 ID=cds-TGE04528.1;Parent=gene-C9F07_08045;Dbxref=NCBI_GP:TGE04528.1;Name=TGE04528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456067.1;locus_tag=C9F07_08045;partial=true;product=adenosine deaminase;protein_id=TGE04528.1;start_range=.,1;transl_table=11 PYKI01000876.1 Genbank gene 293 711 . - . ID=gene-C9F07_08050;Name=C9F07_08050;end_range=711,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08050;partial=true PYKI01000876.1 Protein Homology CDS 293 711 . - 2 ID=cds-TGE04529.1;Parent=gene-C9F07_08050;Dbxref=NCBI_GP:TGE04529.1;Name=TGE04529.1;end_range=711,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456068.3;locus_tag=C9F07_08050;partial=true;product=oxidoreductase;protein_id=TGE04529.1;transl_table=11 ##sequence-region PYKI01000281.1 1 709 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000281.1 Genbank region 1 709 . + . ID=PYKI01000281.1:1..709;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01001490.1 1 709 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001490.1 Genbank region 1 709 . + . ID=PYKI01001490.1:1..709;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001490.1 Genbank pseudogene 47 574 . - . ID=gene-C9F07_14190;Name=C9F07_14190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14190;pseudo=true PYKI01001490.1 Protein Homology CDS 47 574 . - 0 ID=cds-C9F07_14190;Parent=gene-C9F07_14190;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454703.1;locus_tag=C9F07_14190;product=4-hydroxythreonine-4-phosphate dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01000526.1 1 709 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000526.1 Genbank region 1 709 . + . ID=PYKI01000526.1:1..709;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01001903.1 1 708 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001903.1 Genbank region 1 708 . + . ID=PYKI01001903.1:1..708;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001903.1 Genbank gene 1 446 . - . ID=gene-C9F07_18330;Name=C9F07_18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18330;partial=true;start_range=.,1 PYKI01001903.1 Protein Homology CDS 1 446 . - 0 ID=cds-TGD61427.1;Parent=gene-C9F07_18330;Dbxref=NCBI_GP:TGD61427.1;Name=TGD61427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414600.1;locus_tag=C9F07_18330;partial=true;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=TGD61427.1;start_range=.,1;transl_table=11 PYKI01001903.1 Genbank gene 458 706 . - . ID=gene-C9F07_18335;Name=C9F07_18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18335 PYKI01001903.1 Protein Homology CDS 458 706 . - 0 ID=cds-TGD61426.1;Parent=gene-C9F07_18335;Dbxref=NCBI_GP:TGD61426.1;Name=TGD61426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001363191.1;locus_tag=C9F07_18335;product=RNA polymerase;protein_id=TGD61426.1;transl_table=11 ##sequence-region PYKI01000588.1 1 706 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000588.1 Genbank region 1 706 . + . ID=PYKI01000588.1:1..706;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000588.1 Genbank gene 1 706 . + . ID=gene-C9F07_04995;Name=C9F07_04995;end_range=706,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04995;partial=true;start_range=.,1 PYKI01000588.1 Protein Homology CDS 1 706 . + 1 ID=cds-TGE14247.1;Parent=gene-C9F07_04995;Dbxref=NCBI_GP:TGE14247.1;Name=TGE14247.1;end_range=706,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455827.1;locus_tag=C9F07_04995;partial=true;product=LysR family transcriptional regulator;protein_id=TGE14247.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001225.1 1 706 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001225.1 Genbank region 1 706 . + . ID=PYKI01001225.1:1..706;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001225.1 Genbank pseudogene 78 706 . - . ID=gene-C9F07_11465;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=pseudogene;locus_tag=C9F07_11465;pseudo=true PYKI01001225.1 Protein Homology CDS 78 706 . - 2 ID=cds-C9F07_11465;Parent=gene-C9F07_11465;Note=FadI%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadJ%3B similar to FadA2B2 complex%3B functions in beta-oxidation of fatty acids during anaerobic growth%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=fadI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456930.1;locus_tag=C9F07_11465;product=acetyl-CoA C-acyltransferase FadI;pseudo=true;transl_table=11 ##sequence-region PYKI01001222.1 1 706 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001222.1 Genbank region 1 706 . + . ID=PYKI01001222.1:1..706;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001222.1 Genbank pseudogene 66 629 . - . ID=gene-C9F07_11440;Name=C9F07_11440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11440;pseudo=true PYKI01001222.1 Protein Homology CDS 66 629 . - 0 ID=cds-C9F07_11440;Parent=gene-C9F07_11440;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455630.1;locus_tag=C9F07_11440;product=phosphatase;pseudo=true;transl_table=11 ##sequence-region PYKI01001193.1 1 3367 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001193.1 Genbank region 1 3367 . + . ID=PYKI01001193.1:1..3367;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001193.1 Genbank gene 1 850 . - . ID=gene-C9F07_11160;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=C9F07_11160;partial=true;start_range=.,1 PYKI01001193.1 Protein Homology CDS 1 850 . - 0 ID=cds-TGD91819.1;Parent=gene-C9F07_11160;Dbxref=NCBI_GP:TGD91819.1;Name=TGD91819.1;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;gbkey=CDS;gene=secD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=C9F07_11160;partial=true;product=protein translocase subunit SecD;protein_id=TGD91819.1;start_range=.,1;transl_table=11 PYKI01001193.1 Genbank gene 878 1210 . - . ID=gene-C9F07_11165;Name=C9F07_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11165 PYKI01001193.1 Protein Homology CDS 878 1210 . - 0 ID=cds-TGD91816.1;Parent=gene-C9F07_11165;Dbxref=NCBI_GP:TGD91816.1;Name=TGD91816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=C9F07_11165;product=preprotein translocase subunit YajC;protein_id=TGD91816.1;transl_table=11 PYKI01001193.1 Genbank gene 1233 2360 . - . ID=gene-C9F07_11170;Name=C9F07_11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11170 PYKI01001193.1 Protein Homology CDS 1233 2360 . - 0 ID=cds-TGD91817.1;Parent=gene-C9F07_11170;Dbxref=NCBI_GP:TGD91817.1;Name=TGD91817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=C9F07_11170;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=TGD91817.1;transl_table=11 PYKI01001193.1 Genbank gene 2424 2534 . - . ID=gene-C9F07_11175;Name=C9F07_11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11175 PYKI01001193.1 Protein Homology CDS 2424 2534 . - 0 ID=cds-TGD91820.1;Parent=gene-C9F07_11175;Dbxref=NCBI_GP:TGD91820.1;Name=TGD91820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219073.1;locus_tag=C9F07_11175;product=DNA metabolism protein;protein_id=TGD91820.1;transl_table=11 PYKI01001193.1 Genbank gene 2545 3367 . - . ID=gene-C9F07_11180;Name=queA;end_range=3367,.;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=C9F07_11180;partial=true PYKI01001193.1 Protein Homology CDS 2545 3367 . - 1 ID=cds-TGD91818.1;Parent=gene-C9F07_11180;Dbxref=NCBI_GP:TGD91818.1;Name=TGD91818.1;end_range=3367,.;gbkey=CDS;gene=queA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=C9F07_11180;partial=true;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=TGD91818.1;transl_table=11 ##sequence-region PYKI01002167.1 1 705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002167.1 Genbank region 1 705 . + . ID=PYKI01002167.1:1..705;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002167.1 Genbank gene 1 395 . + . ID=gene-C9F07_21070;Name=C9F07_21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21070;partial=true;start_range=.,1 PYKI01002167.1 Protein Homology CDS 1 395 . + 2 ID=cds-TGD56992.1;Parent=gene-C9F07_21070;Dbxref=NCBI_GP:TGD56992.1;Name=TGD56992.1;Note=binds with fimbrial subunit LpfA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=C9F07_21070;partial=true;product=long polar fimbrial chaperone LpfB;protein_id=TGD56992.1;start_range=.,1;transl_table=11 PYKI01002167.1 Genbank gene 422 705 . + . ID=gene-C9F07_21075;Name=C9F07_21075;end_range=705,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21075;partial=true PYKI01002167.1 Protein Homology CDS 422 705 . + 0 ID=cds-TGD56993.1;Parent=gene-C9F07_21075;Dbxref=NCBI_GP:TGD56993.1;Name=TGD56993.1;end_range=705,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=C9F07_21075;partial=true;product=fimbrial outer membrane usher protein StiC;protein_id=TGD56993.1;transl_table=11 ##sequence-region PYKI01002704.1 1 705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002704.1 Genbank region 1 705 . + . ID=PYKI01002704.1:1..705;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002704.1 Genbank gene 1 705 . + . ID=gene-C9F07_26970;Name=C9F07_26970;end_range=705,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26970;partial=true;start_range=.,1 PYKI01002704.1 Protein Homology CDS 1 705 . + 2 ID=cds-TGD48081.1;Parent=gene-C9F07_26970;Dbxref=NCBI_GP:TGD48081.1;Name=TGD48081.1;end_range=705,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458220.1;locus_tag=C9F07_26970;partial=true;product=glycosyltransferase;protein_id=TGD48081.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000468.1 1 705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000468.1 Genbank region 1 705 . + . ID=PYKI01000468.1:1..705;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000468.1 Genbank gene 1 373 . - . ID=gene-C9F07_03680;Name=C9F07_03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03680;partial=true;start_range=.,1 PYKI01000468.1 Protein Homology CDS 1 373 . - 0 ID=cds-TGE19761.1;Parent=gene-C9F07_03680;Dbxref=NCBI_GP:TGE19761.1;Name=TGE19761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446866.1;locus_tag=C9F07_03680;partial=true;product=hypothetical protein;protein_id=TGE19761.1;start_range=.,1;transl_table=11 PYKI01000468.1 Genbank gene 428 705 . - . ID=gene-C9F07_03685;Name=C9F07_03685;end_range=705,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03685;partial=true PYKI01000468.1 Protein Homology CDS 428 705 . - 2 ID=cds-TGE19760.1;Parent=gene-C9F07_03685;Dbxref=NCBI_GP:TGE19760.1;Name=TGE19760.1;end_range=705,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455008.1;locus_tag=C9F07_03685;partial=true;product=nucleoside-specific channel-forming protein Tsx;protein_id=TGE19760.1;transl_table=11 ##sequence-region PYKI01003442.1 1 705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003442.1 Genbank region 1 705 . + . ID=PYKI01003442.1:1..705;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003442.1 Genbank gene 1 705 . + . ID=gene-C9F07_34615;Name=C9F07_34615;end_range=705,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34615;partial=true;start_range=.,1 PYKI01003442.1 Protein Homology CDS 1 705 . + 1 ID=cds-TGD33426.1;Parent=gene-C9F07_34615;Dbxref=NCBI_GP:TGD33426.1;Name=TGD33426.1;end_range=705,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458109.1;locus_tag=C9F07_34615;partial=true;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=TGD33426.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000563.1 1 704 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000563.1 Genbank region 1 704 . + . ID=PYKI01000563.1:1..704;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000563.1 Genbank pseudogene 59 704 . - . ID=gene-C9F07_04755;Name=C9F07_04755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04755;pseudo=true PYKI01000563.1 Protein Homology CDS 59 704 . - 1 ID=cds-C9F07_04755;Parent=gene-C9F07_04755;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=C9F07_04755;product=glutamate synthase small subunit;pseudo=true;transl_table=11 ##sequence-region PYKI01002882.1 1 703 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002882.1 Genbank region 1 703 . + . ID=PYKI01002882.1:1..703;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002882.1 Genbank gene 1 129 . - . ID=gene-C9F07_28860;Name=C9F07_28860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28860;partial=true;start_range=.,1 PYKI01002882.1 Protein Homology CDS 1 129 . - 0 ID=cds-TGD44463.1;Parent=gene-C9F07_28860;Dbxref=NCBI_GP:TGD44463.1;Name=TGD44463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=C9F07_28860;partial=true;product=GFA family protein;protein_id=TGD44463.1;start_range=.,1;transl_table=11 PYKI01002882.1 Genbank gene 273 703 . - . ID=gene-C9F07_28865;Name=ompD;end_range=703,.;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=C9F07_28865;partial=true PYKI01002882.1 Protein Homology CDS 273 703 . - 2 ID=cds-TGD44462.1;Parent=gene-C9F07_28865;Dbxref=NCBI_GP:TGD44462.1;Name=TGD44462.1;end_range=703,.;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=C9F07_28865;partial=true;product=porin OmpD;protein_id=TGD44462.1;transl_table=11 ##sequence-region PYKI01002049.1 1 703 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002049.1 Genbank region 1 703 . + . ID=PYKI01002049.1:1..703;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002049.1 Genbank gene 121 564 . + . ID=gene-C9F07_19830;Name=C9F07_19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19830 PYKI01002049.1 Protein Homology CDS 121 564 . + 0 ID=cds-TGD59964.1;Parent=gene-C9F07_19830;Dbxref=NCBI_GP:TGD59964.1;Name=TGD59964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457654.1;locus_tag=C9F07_19830;product=hypothetical protein;protein_id=TGD59964.1;transl_table=11 PYKI01002049.1 Genbank gene 544 703 . - . ID=gene-C9F07_19835;Name=C9F07_19835;end_range=703,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19835;partial=true PYKI01002049.1 Protein Homology CDS 544 703 . - 1 ID=cds-TGD59965.1;Parent=gene-C9F07_19835;Dbxref=NCBI_GP:TGD59965.1;Name=TGD59965.1;end_range=703,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457653.1;locus_tag=C9F07_19835;partial=true;product=protease;protein_id=TGD59965.1;transl_table=11 ##sequence-region PYKI01001077.1 1 702 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001077.1 Genbank region 1 702 . + . ID=PYKI01001077.1:1..702;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001077.1 Genbank pseudogene 52 669 . - . ID=gene-C9F07_09990;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=pseudogene;gene_synonym=yicF;locus_tag=C9F07_09990;pseudo=true PYKI01001077.1 Protein Homology CDS 52 669 . - 0 ID=cds-C9F07_09990;Parent=gene-C9F07_09990;Note=this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=ligB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=C9F07_09990;product=ATP-dependent DNA ligase;pseudo=true;transl_table=11 ##sequence-region PYKI01002121.1 1 702 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002121.1 Genbank region 1 702 . + . ID=PYKI01002121.1:1..702;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002121.1 Genbank gene 1 702 . + . ID=gene-C9F07_20535;Name=C9F07_20535;end_range=702,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20535;partial=true;start_range=.,1 PYKI01002121.1 Protein Homology CDS 1 702 . + 0 ID=cds-TGD58320.1;Parent=gene-C9F07_20535;Dbxref=NCBI_GP:TGD58320.1;Name=TGD58320.1;end_range=702,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=C9F07_20535;partial=true;product=CTP synthase;protein_id=TGD58320.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003248.1 1 701 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003248.1 Genbank region 1 701 . + . ID=PYKI01003248.1:1..701;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003248.1 Genbank gene 49 701 . - . ID=gene-C9F07_32695;Name=C9F07_32695;end_range=701,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32695;partial=true PYKI01003248.1 Protein Homology CDS 49 701 . - 2 ID=cds-TGD36355.1;Parent=gene-C9F07_32695;Dbxref=NCBI_GP:TGD36355.1;Name=TGD36355.1;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;end_range=701,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=C9F07_32695;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGD36355.1;transl_table=11 ##sequence-region PYKI01000550.1 1 3365 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000550.1 Genbank region 1 3365 . + . ID=PYKI01000550.1:1..3365;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000550.1 Genbank gene 242 901 . - . ID=gene-C9F07_04585;Name=C9F07_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04585 PYKI01000550.1 Protein Homology CDS 242 901 . - 0 ID=cds-TGE15154.1;Parent=gene-C9F07_04585;Dbxref=NCBI_GP:TGE15154.1;Name=TGE15154.1;Note=catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457461.1;locus_tag=C9F07_04585;product=ribose-5-phosphate isomerase;protein_id=TGE15154.1;transl_table=11 PYKI01000550.1 Genbank gene 1055 1948 . + . ID=gene-C9F07_04590;Name=C9F07_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04590 PYKI01000550.1 Protein Homology CDS 1055 1948 . + 0 ID=cds-TGE15155.1;Parent=gene-C9F07_04590;Dbxref=NCBI_GP:TGE15155.1;Name=TGE15155.1;Note=specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=C9F07_04590;product=chromosome initiation inhibitor;protein_id=TGE15155.1;transl_table=11 PYKI01000550.1 Genbank gene 2116 2862 . - . ID=gene-C9F07_04595;Name=C9F07_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04595 PYKI01000550.1 Protein Homology CDS 2116 2862 . - 0 ID=cds-TGE15156.1;Parent=gene-C9F07_04595;Dbxref=NCBI_GP:TGE15156.1;Name=TGE15156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457463.1;locus_tag=C9F07_04595;product=oxidative stress defense protein;protein_id=TGE15156.1;transl_table=11 PYKI01000550.1 Genbank gene 2956 3365 . - . ID=gene-C9F07_04600;Name=C9F07_04600;end_range=3365,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04600;partial=true PYKI01000550.1 Protein Homology CDS 2956 3365 . - 2 ID=cds-TGE15157.1;Parent=gene-C9F07_04600;Dbxref=NCBI_GP:TGE15157.1;Name=TGE15157.1;Note=Involved in the export of arginine;end_range=3365,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457464.1;locus_tag=C9F07_04600;partial=true;product=arginine transporter;protein_id=TGE15157.1;transl_table=11 ##sequence-region PYKI01001059.1 1 700 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001059.1 Genbank region 1 700 . + . ID=PYKI01001059.1:1..700;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001059.1 Genbank gene 305 700 . - . ID=gene-C9F07_09775;Name=C9F07_09775;end_range=700,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09775;partial=true PYKI01001059.1 Protein Homology CDS 305 700 . - 0 ID=cds-TGD96231.1;Parent=gene-C9F07_09775;Dbxref=NCBI_GP:TGD96231.1;Name=TGD96231.1;end_range=700,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080411.1;locus_tag=C9F07_09775;partial=true;product=hypothetical protein;protein_id=TGD96231.1;transl_table=11 ##sequence-region PYKI01003186.1 1 700 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003186.1 Genbank region 1 700 . + . ID=PYKI01003186.1:1..700;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003186.1 Genbank gene 4 198 . + . ID=gene-C9F07_31975;Name=C9F07_31975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31975 PYKI01003186.1 Protein Homology CDS 4 198 . + 0 ID=cds-TGD37536.1;Parent=gene-C9F07_31975;Dbxref=NCBI_GP:TGD37536.1;Name=TGD37536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458456.1;locus_tag=C9F07_31975;product=bacterioferritin-associated ferredoxin;protein_id=TGD37536.1;transl_table=11 PYKI01003186.1 Genbank gene 271 700 . + . ID=gene-C9F07_31980;Name=C9F07_31980;end_range=700,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31980;partial=true PYKI01003186.1 Protein Homology CDS 271 700 . + 0 ID=cds-TGD37535.1;Parent=gene-C9F07_31980;Dbxref=NCBI_GP:TGD37535.1;Name=TGD37535.1;end_range=700,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=C9F07_31980;partial=true;product=bacterioferritin;protein_id=TGD37535.1;transl_table=11 ##sequence-region PYKI01002213.1 1 699 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002213.1 Genbank region 1 699 . + . ID=PYKI01002213.1:1..699;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002213.1 Genbank gene 1 699 . - . ID=gene-C9F07_21565;Name=fimH;end_range=699,.;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=C9F07_21565;partial=true;start_range=.,1 PYKI01002213.1 Protein Homology CDS 1 699 . - 1 ID=cds-TGD56488.1;Parent=gene-C9F07_21565;Dbxref=NCBI_GP:TGD56488.1;Name=TGD56488.1;Note=involved in the regulation of fimbriae length and mediates adhesion of type 1 fimbriae;end_range=699,.;gbkey=CDS;gene=fimH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455136.1;locus_tag=C9F07_21565;partial=true;product=adhesin;protein_id=TGD56488.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003100.1 1 699 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003100.1 Genbank region 1 699 . + . ID=PYKI01003100.1:1..699;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003100.1 Genbank gene 1 297 . + . ID=gene-C9F07_31030;Name=C9F07_31030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31030;partial=true;start_range=.,1 PYKI01003100.1 Protein Homology CDS 1 297 . + 0 ID=cds-TGD39792.1;Parent=gene-C9F07_31030;Dbxref=NCBI_GP:TGD39792.1;Name=TGD39792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458248.1;locus_tag=C9F07_31030;partial=true;product=AraC family transcriptional regulator;protein_id=TGD39792.1;start_range=.,1;transl_table=11 PYKI01003100.1 Genbank gene 446 699 . - . ID=gene-C9F07_31035;Name=araD;end_range=699,.;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=C9F07_31035;partial=true PYKI01003100.1 Protein Homology CDS 446 699 . - 2 ID=cds-TGD39793.1;Parent=gene-C9F07_31035;Dbxref=NCBI_GP:TGD39793.1;Name=TGD39793.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;end_range=699,.;gbkey=CDS;gene=araD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002414737.1;locus_tag=C9F07_31035;partial=true;product=L-ribulose-5-phosphate 4-epimerase;protein_id=TGD39793.1;transl_table=11 ##sequence-region PYKI01001909.1 1 698 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001909.1 Genbank region 1 698 . + . ID=PYKI01001909.1:1..698;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001909.1 Genbank pseudogene 79 698 . + . ID=gene-C9F07_18385;Name=C9F07_18385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18385;pseudo=true PYKI01001909.1 Protein Homology CDS 79 698 . + 0 ID=cds-C9F07_18385;Parent=gene-C9F07_18385;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001684113.1;locus_tag=C9F07_18385;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000286.1 1 698 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000286.1 Genbank region 1 698 . + . ID=PYKI01000286.1:1..698;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000286.1 Genbank gene 1 359 . + . ID=gene-C9F07_01860;Name=C9F07_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01860;partial=true;start_range=.,1 PYKI01000286.1 Protein Homology CDS 1 359 . + 2 ID=cds-TGE27820.1;Parent=gene-C9F07_01860;Dbxref=NCBI_GP:TGE27820.1;Name=TGE27820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458942.1;locus_tag=C9F07_01860;partial=true;product=DUF445 domain-containing protein;protein_id=TGE27820.1;start_range=.,1;transl_table=11 PYKI01000286.1 Genbank gene 568 698 . + . ID=gene-C9F07_01865;Name=C9F07_01865;end_range=698,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01865;partial=true PYKI01000286.1 Protein Homology CDS 568 698 . + 0 ID=cds-TGE27821.1;Parent=gene-C9F07_01865;Dbxref=NCBI_GP:TGE27821.1;Name=TGE27821.1;end_range=698,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458941.1;locus_tag=C9F07_01865;partial=true;product=MFS transporter;protein_id=TGE27821.1;transl_table=11 ##sequence-region PYKI01001195.1 1 697 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001195.1 Genbank region 1 697 . + . ID=PYKI01001195.1:1..697;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001195.1 Genbank pseudogene 18 656 . + . ID=gene-C9F07_11190;Name=C9F07_11190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11190;pseudo=true PYKI01001195.1 Protein Homology CDS 18 656 . + 0 ID=cds-C9F07_11190;Parent=gene-C9F07_11190;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=C9F07_11190;product=6-phospho-beta-glucosidase;pseudo=true;transl_table=11 ##sequence-region PYKI01001663.1 1 697 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001663.1 Genbank region 1 697 . + . ID=PYKI01001663.1:1..697;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001663.1 Genbank gene 1 697 . - . ID=gene-C9F07_15880;Name=C9F07_15880;end_range=697,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15880;partial=true;start_range=.,1 PYKI01001663.1 Protein Homology CDS 1 697 . - 0 ID=cds-TGD70150.1;Parent=gene-C9F07_15880;Dbxref=NCBI_GP:TGD70150.1;Name=TGD70150.1;end_range=697,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=C9F07_15880;partial=true;product=hypothetical protein;protein_id=TGD70150.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000899.1 1 697 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000899.1 Genbank region 1 697 . + . ID=PYKI01000899.1:1..697;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000899.1 Genbank gene 1 697 . - . ID=gene-C9F07_08220;Name=C9F07_08220;end_range=697,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08220;partial=true;start_range=.,1 PYKI01000899.1 Protein Homology CDS 1 697 . - 2 ID=cds-TGE03356.1;Parent=gene-C9F07_08220;Dbxref=NCBI_GP:TGE03356.1;Name=TGE03356.1;end_range=697,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455072.1;locus_tag=C9F07_08220;partial=true;product=hydrophobe/amphiphile efflux-1 family RND transporter;protein_id=TGE03356.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001207.1 1 696 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001207.1 Genbank region 1 696 . + . ID=PYKI01001207.1:1..696;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001207.1 Genbank pseudogene 57 696 . - . ID=gene-C9F07_11310;Name=C9F07_11310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11310;pseudo=true PYKI01001207.1 Protein Homology CDS 57 696 . - 1 ID=cds-C9F07_11310;Parent=gene-C9F07_11310;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=C9F07_11310;product=colanic acid biosynthesis glycosyltransferase WcaC;pseudo=true;transl_table=11 ##sequence-region PYKI01000813.1 1 3362 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000813.1 Genbank region 1 3362 . + . ID=PYKI01000813.1:1..3362;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000813.1 Genbank gene 1 1062 . - . ID=gene-C9F07_07345;Name=C9F07_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07345;partial=true;start_range=.,1 PYKI01000813.1 Protein Homology CDS 1 1062 . - 0 ID=cds-TGE07522.1;Parent=gene-C9F07_07345;Dbxref=NCBI_GP:TGE07522.1;Name=TGE07522.1;Note=catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458491.1;locus_tag=C9F07_07345;partial=true;product=16S rRNA (cytosine(967)-C(5))-methyltransferase;protein_id=TGE07522.1;start_range=.,1;transl_table=11 PYKI01000813.1 Genbank gene 1114 2061 . - . ID=gene-C9F07_07350;Name=C9F07_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07350 PYKI01000813.1 Protein Homology CDS 1114 2061 . - 0 ID=cds-TGE07519.1;Parent=gene-C9F07_07350;Dbxref=NCBI_GP:TGE07519.1;Name=TGE07519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=C9F07_07350;product=methionyl-tRNA formyltransferase;protein_id=TGE07519.1;transl_table=11 PYKI01000813.1 Genbank gene 2077 2586 . - . ID=gene-C9F07_07355;Name=C9F07_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07355 PYKI01000813.1 Protein Homology CDS 2077 2586 . - 0 ID=cds-TGE07520.1;Parent=gene-C9F07_07355;Dbxref=NCBI_GP:TGE07520.1;Name=TGE07520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=C9F07_07355;product=peptide deformylase;protein_id=TGE07520.1;transl_table=11 PYKI01000813.1 Genbank gene 2718 3362 . + . ID=gene-C9F07_07360;Name=C9F07_07360;end_range=3362,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07360;partial=true PYKI01000813.1 Protein Homology CDS 2718 3362 . + 0 ID=cds-TGE07521.1;Parent=gene-C9F07_07360;Dbxref=NCBI_GP:TGE07521.1;Name=TGE07521.1;end_range=3362,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=C9F07_07360;partial=true;product=DNA-protecting protein DprA;protein_id=TGE07521.1;transl_table=11 ##sequence-region PYKI01002629.1 1 695 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002629.1 Genbank region 1 695 . + . ID=PYKI01002629.1:1..695;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002629.1 Genbank gene 289 695 . + . ID=gene-C9F07_26165;Name=ydiV;end_range=695,.;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=C9F07_26165;partial=true PYKI01002629.1 Protein Homology CDS 289 695 . + 0 ID=cds-TGD49463.1;Parent=gene-C9F07_26165;Dbxref=NCBI_GP:TGD49463.1;Name=TGD49463.1;end_range=695,.;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=C9F07_26165;partial=true;product=anti-FlhDC factor YdiV;protein_id=TGD49463.1;transl_table=11 ##sequence-region PYKI01001485.1 1 695 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001485.1 Genbank region 1 695 . + . ID=PYKI01001485.1:1..695;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001485.1 Genbank gene 1 244 . + . ID=gene-C9F07_14130;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=C9F07_14130;partial=true;start_range=.,1 PYKI01001485.1 Protein Homology CDS 1 244 . + 1 ID=cds-TGD79214.1;Parent=gene-C9F07_14130;Dbxref=NCBI_GP:TGD79214.1;Name=TGD79214.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;gbkey=CDS;gene=frr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=C9F07_14130;partial=true;product=ribosome-recycling factor;protein_id=TGD79214.1;start_range=.,1;transl_table=11 PYKI01001485.1 Genbank gene 386 695 . + . ID=gene-C9F07_14135;Name=C9F07_14135;end_range=695,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14135;partial=true PYKI01001485.1 Protein Homology CDS 386 695 . + 0 ID=cds-TGD79215.1;Parent=gene-C9F07_14135;Dbxref=NCBI_GP:TGD79215.1;Name=TGD79215.1;end_range=695,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=C9F07_14135;partial=true;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=TGD79215.1;transl_table=11 ##sequence-region PYKI01002077.1 1 695 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002077.1 Genbank region 1 695 . + . ID=PYKI01002077.1:1..695;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002077.1 Genbank gene 1 378 . + . ID=gene-C9F07_20145;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=C9F07_20145;partial=true;start_range=.,1 PYKI01002077.1 Protein Homology CDS 1 378 . + 0 ID=cds-TGD59311.1;Parent=gene-C9F07_20145;Dbxref=NCBI_GP:TGD59311.1;Name=TGD59311.1;Note=With ArtMQJI transports arginine across the inner membrane;gbkey=CDS;gene=artP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455231.1;locus_tag=C9F07_20145;partial=true;product=arginine transporter ATP-binding subunit;protein_id=TGD59311.1;start_range=.,1;transl_table=11 PYKI01002077.1 Genbank gene 495 695 . + . ID=gene-C9F07_20150;Name=C9F07_20150;end_range=695,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20150;partial=true PYKI01002077.1 Protein Homology CDS 495 695 . + 0 ID=cds-TGD59312.1;Parent=gene-C9F07_20150;Dbxref=NCBI_GP:TGD59312.1;Name=TGD59312.1;end_range=695,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=C9F07_20150;partial=true;product=hypothetical protein;protein_id=TGD59312.1;transl_table=11 ##sequence-region PYKI01001921.1 1 694 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001921.1 Genbank region 1 694 . + . ID=PYKI01001921.1:1..694;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001921.1 Genbank gene 1 659 . - . ID=gene-C9F07_18510;Name=C9F07_18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18510;partial=true;start_range=.,1 PYKI01001921.1 Protein Homology CDS 1 659 . - 0 ID=cds-TGD61034.1;Parent=gene-C9F07_18510;Dbxref=NCBI_GP:TGD61034.1;Name=TGD61034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001726449.1;locus_tag=C9F07_18510;partial=true;product=sirohydrochlorin cobaltochelatase;protein_id=TGD61034.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002428.1 1 694 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002428.1 Genbank region 1 694 . + . ID=PYKI01002428.1:1..694;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002428.1 Genbank gene 1 694 . - . ID=gene-C9F07_23995;Name=C9F07_23995;end_range=694,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23995;partial=true;start_range=.,1 PYKI01002428.1 Protein Homology CDS 1 694 . - 0 ID=cds-TGD51333.1;Parent=gene-C9F07_23995;Dbxref=NCBI_GP:TGD51333.1;Name=TGD51333.1;Note=catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;end_range=694,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455266.1;locus_tag=C9F07_23995;partial=true;product=potassium-transporting ATPase subunit KdpA;protein_id=TGD51333.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003570.1 1 694 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003570.1 Genbank region 1 694 . + . ID=PYKI01003570.1:1..694;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003570.1 Genbank gene 1 694 . - . ID=gene-C9F07_36050;Name=C9F07_36050;end_range=694,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36050;partial=true;start_range=.,1 PYKI01003570.1 Protein Homology CDS 1 694 . - 0 ID=cds-TGD30314.1;Parent=gene-C9F07_36050;Dbxref=NCBI_GP:TGD30314.1;Name=TGD30314.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate;end_range=694,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456452.1;locus_tag=C9F07_36050;partial=true;product=phosphogluconate dehydratase;protein_id=TGD30314.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001214.1 1 693 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001214.1 Genbank region 1 693 . + . ID=PYKI01001214.1:1..693;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001214.1 Genbank pseudogene 44 310 . - . ID=gene-C9F07_11370;Name=C9F07_11370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11370;pseudo=true PYKI01001214.1 Protein Homology CDS 44 310 . - 0 ID=cds-C9F07_11370;Parent=gene-C9F07_11370;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454926.1;locus_tag=C9F07_11370;product=RNA ligase RtcB family protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000719.1 1 693 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000719.1 Genbank region 1 693 . + . ID=PYKI01000719.1:1..693;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000719.1 Genbank gene 49 264 . + . ID=gene-C9F07_06295;Name=C9F07_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06295 PYKI01000719.1 Protein Homology CDS 49 264 . + 0 ID=cds-TGE11208.1;Parent=gene-C9F07_06295;Dbxref=NCBI_GP:TGE11208.1;Name=TGE11208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123931.1;locus_tag=C9F07_06295;product=transposase;protein_id=TGE11208.1;transl_table=11 PYKI01000719.1 Genbank gene 349 693 . - . ID=gene-C9F07_06300;Name=C9F07_06300;end_range=693,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06300;partial=true PYKI01000719.1 Protein Homology CDS 349 693 . - 0 ID=cds-TGE11209.1;Parent=gene-C9F07_06300;Dbxref=NCBI_GP:TGE11209.1;Name=TGE11209.1;end_range=693,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458984.1;locus_tag=C9F07_06300;partial=true;product=hypothetical protein;protein_id=TGE11209.1;transl_table=11 ##sequence-region PYKI01003280.1 1 693 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003280.1 Genbank region 1 693 . + . ID=PYKI01003280.1:1..693;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003280.1 Genbank pseudogene 1 684 . - . ID=gene-C9F07_32990;Name=C9F07_32990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32990;pseudo=true PYKI01003280.1 Protein Homology CDS 1 684 . - 0 ID=cds-C9F07_32990;Parent=gene-C9F07_32990;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456611.1;locus_tag=C9F07_32990;product=thiosulfate reductase cytochrome B subunit;pseudo=true;transl_table=11 ##sequence-region PYKI01001058.1 1 692 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001058.1 Genbank region 1 692 . + . ID=PYKI01001058.1:1..692;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001058.1 Genbank gene 1 692 . - . ID=gene-C9F07_09770;Name=C9F07_09770;end_range=692,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09770;partial=true;start_range=.,1 PYKI01001058.1 Protein Homology CDS 1 692 . - 2 ID=cds-TGD96235.1;Parent=gene-C9F07_09770;Dbxref=NCBI_GP:TGD96235.1;Name=TGD96235.1;end_range=692,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=C9F07_09770;partial=true;product=methyl-accepting chemotaxis protein;protein_id=TGD96235.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002231.1 1 3348 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002231.1 Genbank region 1 3348 . + . ID=PYKI01002231.1:1..3348;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002231.1 Genbank gene 1 420 . + . ID=gene-C9F07_21760;Name=C9F07_21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21760;partial=true;start_range=.,1 PYKI01002231.1 Protein Homology CDS 1 420 . + 0 ID=cds-TGD56193.1;Parent=gene-C9F07_21760;Dbxref=NCBI_GP:TGD56193.1;Name=TGD56193.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455690.1;locus_tag=C9F07_21760;partial=true;product=beta-ketoacyl-ACP synthase II;protein_id=TGD56193.1;start_range=.,1;transl_table=11 PYKI01002231.1 Genbank gene 491 1015 . - . ID=gene-C9F07_21765;Name=C9F07_21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21765 PYKI01002231.1 Protein Homology CDS 491 1015 . - 0 ID=cds-TGD56194.1;Parent=gene-C9F07_21765;Dbxref=NCBI_GP:TGD56194.1;Name=TGD56194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068580.1;locus_tag=C9F07_21765;product=type 1 fimbrial protein;protein_id=TGD56194.1;transl_table=11 PYKI01002231.1 Genbank gene 1030 1524 . - . ID=gene-C9F07_21770;Name=C9F07_21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21770 PYKI01002231.1 Protein Homology CDS 1030 1524 . - 0 ID=cds-TGD56195.1;Parent=gene-C9F07_21770;Dbxref=NCBI_GP:TGD56195.1;Name=TGD56195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864087.1;locus_tag=C9F07_21770;product=adhesin;protein_id=TGD56195.1;transl_table=11 PYKI01002231.1 Genbank gene 1564 2562 . - . ID=gene-C9F07_21775;Name=C9F07_21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21775 PYKI01002231.1 Protein Homology CDS 1564 2562 . - 0 ID=cds-TGD56196.1;Parent=gene-C9F07_21775;Dbxref=NCBI_GP:TGD56196.1;Name=TGD56196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754357.1;locus_tag=C9F07_21775;product=fimbrial protein;protein_id=TGD56196.1;transl_table=11 PYKI01002231.1 Genbank gene 2600 3348 . - . ID=gene-C9F07_21780;Name=C9F07_21780;end_range=3348,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21780;partial=true PYKI01002231.1 Protein Homology CDS 2600 3348 . - 2 ID=cds-TGD56197.1;Parent=gene-C9F07_21780;Dbxref=NCBI_GP:TGD56197.1;Name=TGD56197.1;end_range=3348,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990584.1;locus_tag=C9F07_21780;partial=true;product=fimbrial assembly protein;protein_id=TGD56197.1;transl_table=11 ##sequence-region PYKI01000140.1 1 692 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000140.1 Genbank region 1 692 . + . ID=PYKI01000140.1:1..692;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000140.1 Genbank gene 1 605 . + . ID=gene-C9F07_00955;Name=C9F07_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00955;partial=true;start_range=.,1 PYKI01000140.1 Protein Homology CDS 1 605 . + 2 ID=cds-TGE30082.1;Parent=gene-C9F07_00955;Dbxref=NCBI_GP:TGE30082.1;Name=TGE30082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=C9F07_00955;partial=true;product=EamA family transporter;protein_id=TGE30082.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000877.1 1 691 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000877.1 Genbank region 1 691 . + . ID=PYKI01000877.1:1..691;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000877.1 Genbank gene 1 691 . + . ID=gene-C9F07_08055;Name=C9F07_08055;end_range=691,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08055;partial=true;start_range=.,1 PYKI01000877.1 Protein Homology CDS 1 691 . + 0 ID=cds-TGE04429.1;Parent=gene-C9F07_08055;Dbxref=NCBI_GP:TGE04429.1;Name=TGE04429.1;end_range=691,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455178.1;locus_tag=C9F07_08055;partial=true;product=oxidoreductase;protein_id=TGE04429.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002764.1 1 691 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002764.1 Genbank region 1 691 . + . ID=PYKI01002764.1:1..691;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002764.1 Genbank gene 132 635 . + . ID=gene-C9F07_27625;Name=C9F07_27625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27625 PYKI01002764.1 Protein Homology CDS 132 635 . + 0 ID=cds-TGD46645.1;Parent=gene-C9F07_27625;Dbxref=NCBI_GP:TGD46645.1;Name=TGD46645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=C9F07_27625;product=chemotaxis protein CheW;protein_id=TGD46645.1;transl_table=11 ##sequence-region PYKI01001250.1 1 691 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001250.1 Genbank region 1 691 . + . ID=PYKI01001250.1:1..691;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001250.1 Genbank pseudogene 11 190 . - . ID=gene-C9F07_11645;Name=C9F07_11645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11645;pseudo=true PYKI01001250.1 Protein Homology CDS 11 190 . - 0 ID=cds-C9F07_11645;Parent=gene-C9F07_11645;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456097.1;locus_tag=C9F07_11645;product=glutaredoxin;pseudo=true;transl_table=11 PYKI01001250.1 Genbank gene 493 691 . + . ID=gene-C9F07_11650;Name=C9F07_11650;end_range=691,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11650;partial=true PYKI01001250.1 Protein Homology CDS 493 691 . + 0 ID=cds-TGD90129.1;Parent=gene-C9F07_11650;Dbxref=NCBI_GP:TGD90129.1;Name=TGD90129.1;end_range=691,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456098.1;locus_tag=C9F07_11650;partial=true;product=endopeptidase;protein_id=TGD90129.1;transl_table=11 ##sequence-region PYKI01000554.1 1 691 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000554.1 Genbank region 1 691 . + . ID=PYKI01000554.1:1..691;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000554.1 Genbank gene 70 691 . + . ID=gene-C9F07_04635;Name=C9F07_04635;end_range=691,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04635;partial=true PYKI01000554.1 Protein Homology CDS 70 691 . + 0 ID=cds-TGE15045.1;Parent=gene-C9F07_04635;Dbxref=NCBI_GP:TGE15045.1;Name=TGE15045.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%3B catalyzes the phosphorylation of maltose and glucose concomitant with their translocation across the cell membrane%3B component IIB catalyzes the phosphorylation of the sugar molecule%3B IIC forms the translocation channel and contains the substrate specific binding site;end_range=691,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=C9F07_04635;partial=true;product=PTS sugar transporter subunit IIBC;protein_id=TGE15045.1;transl_table=11 ##sequence-region PYKI01002740.1 1 691 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002740.1 Genbank region 1 691 . + . ID=PYKI01002740.1:1..691;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002740.1 Genbank gene 1 691 . - . ID=gene-C9F07_27355;Name=C9F07_27355;end_range=691,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27355;partial=true;start_range=.,1 PYKI01002740.1 Protein Homology CDS 1 691 . - 2 ID=cds-TGD47137.1;Parent=gene-C9F07_27355;Dbxref=NCBI_GP:TGD47137.1;Name=TGD47137.1;Note=sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein;end_range=691,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455263.1;locus_tag=C9F07_27355;partial=true;product=two-component system sensor histidine kinase KdbD;protein_id=TGD47137.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000752.1 1 690 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000752.1 Genbank region 1 690 . + . ID=PYKI01000752.1:1..690;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000752.1 Genbank gene 1 178 . + . ID=gene-C9F07_06635;Name=C9F07_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06635;partial=true;start_range=.,1 PYKI01000752.1 Protein Homology CDS 1 178 . + 1 ID=cds-TGE10687.1;Parent=gene-C9F07_06635;Dbxref=NCBI_GP:TGE10687.1;Name=TGE10687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461630.1;locus_tag=C9F07_06635;partial=true;product=DNA-invertase;protein_id=TGE10687.1;start_range=.,1;transl_table=11 PYKI01000752.1 Genbank gene 281 690 . + . ID=gene-C9F07_06640;Name=C9F07_06640;end_range=690,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06640;partial=true PYKI01000752.1 Protein Homology CDS 281 690 . + 0 ID=cds-TGE10688.1;Parent=gene-C9F07_06640;Dbxref=NCBI_GP:TGE10688.1;Name=TGE10688.1;end_range=690,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461629.1;locus_tag=C9F07_06640;partial=true;product=phage tail protein;protein_id=TGE10688.1;transl_table=11 ##sequence-region PYKI01002865.1 1 689 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002865.1 Genbank region 1 689 . + . ID=PYKI01002865.1:1..689;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002865.1 Genbank gene 1 66 . - . ID=gene-C9F07_28705;Name=C9F07_28705;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_28705 PYKI01002865.1 tRNAscan-SE tRNA 1 66 . - . ID=rna-C9F07_28705;Parent=gene-C9F07_28705;anticodon=(pos:complement(34..36));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_28705;product=tRNA-Asn PYKI01002865.1 tRNAscan-SE exon 1 66 . - . ID=exon-C9F07_28705-1;Parent=rna-C9F07_28705;anticodon=(pos:complement(34..36));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_28705;product=tRNA-Asn PYKI01002865.1 Genbank pseudogene 229 609 . + . ID=gene-C9F07_28710;Name=C9F07_28710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28710;pseudo=true PYKI01002865.1 Protein Homology CDS 229 609 . + 0 ID=cds-C9F07_28710;Parent=gene-C9F07_28710;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456567.1;locus_tag=C9F07_28710;product=FMN/FAD transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01003226.1 1 689 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003226.1 Genbank region 1 689 . + . ID=PYKI01003226.1:1..689;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003226.1 Genbank gene 1 664 . - . ID=gene-C9F07_32495;Name=C9F07_32495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32495;partial=true;start_range=.,1 PYKI01003226.1 Protein Homology CDS 1 664 . - 0 ID=cds-TGD36636.1;Parent=gene-C9F07_32495;Dbxref=NCBI_GP:TGD36636.1;Name=TGD36636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=C9F07_32495;partial=true;product=hypothetical protein;protein_id=TGD36636.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003245.1 1 688 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003245.1 Genbank region 1 688 . + . ID=PYKI01003245.1:1..688;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003245.1 Genbank gene 1 688 . + . ID=gene-C9F07_32675;Name=narH;end_range=688,.;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=C9F07_32675;partial=true;start_range=.,1 PYKI01003245.1 Protein Homology CDS 1 688 . + 0 ID=cds-TGD36380.1;Parent=gene-C9F07_32675;Dbxref=NCBI_GP:TGD36380.1;Name=TGD36380.1;Note=with NarGJI catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high;end_range=688,.;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455740.1;locus_tag=C9F07_32675;partial=true;product=nitrate reductase subunit beta;protein_id=TGD36380.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001709.1 1 3347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001709.1 Genbank region 1 3347 . + . ID=PYKI01001709.1:1..3347;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001709.1 Genbank gene 1 715 . + . ID=gene-C9F07_16305;Name=C9F07_16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16305;partial=true;start_range=.,1 PYKI01001709.1 Protein Homology CDS 1 715 . + 1 ID=cds-TGD69118.1;Parent=gene-C9F07_16305;Dbxref=NCBI_GP:TGD69118.1;Name=TGD69118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457059.1;locus_tag=C9F07_16305;partial=true;product=ferredoxin;protein_id=TGD69118.1;start_range=.,1;transl_table=11 PYKI01001709.1 Genbank gene 836 1267 . + . ID=gene-C9F07_16310;Name=C9F07_16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16310 PYKI01001709.1 Protein Homology CDS 836 1267 . + 0 ID=cds-TGD69119.1;Parent=gene-C9F07_16310;Dbxref=NCBI_GP:TGD69119.1;Name=TGD69119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=C9F07_16310;product=nucleoside-diphosphate kinase;protein_id=TGD69119.1;transl_table=11 PYKI01001709.1 Genbank gene 1474 2640 . + . ID=gene-C9F07_16315;Name=C9F07_16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16315 PYKI01001709.1 Protein Homology CDS 1474 2640 . + 0 ID=cds-TGD69120.1;Parent=gene-C9F07_16315;Dbxref=NCBI_GP:TGD69120.1;Name=TGD69120.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457057.1;locus_tag=C9F07_16315;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=TGD69120.1;transl_table=11 PYKI01001709.1 Genbank gene 2673 2819 . + . ID=gene-C9F07_16320;Name=C9F07_16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16320 PYKI01001709.1 Protein Homology CDS 2673 2819 . + 0 ID=cds-TGD69122.1;Parent=gene-C9F07_16320;Dbxref=NCBI_GP:TGD69122.1;Name=TGD69122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533207.1;locus_tag=C9F07_16320;product=pilus assembly protein PilW;protein_id=TGD69122.1;transl_table=11 PYKI01001709.1 Genbank gene 2933 3347 . + . ID=gene-C9F07_16325;Name=C9F07_16325;end_range=3347,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16325;partial=true PYKI01001709.1 Protein Homology CDS 2933 3347 . + 0 ID=cds-TGD69121.1;Parent=gene-C9F07_16325;Dbxref=NCBI_GP:TGD69121.1;Name=TGD69121.1;end_range=3347,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457056.1;locus_tag=C9F07_16325;partial=true;product=cytoskeleton protein RodZ;protein_id=TGD69121.1;transl_table=11 ##sequence-region PYKI01001224.1 1 688 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001224.1 Genbank region 1 688 . + . ID=PYKI01001224.1:1..688;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001224.1 Genbank pseudogene 62 217 . - . ID=gene-C9F07_11455;Name=C9F07_11455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11455;pseudo=true PYKI01001224.1 Protein Homology CDS 62 217 . - 0 ID=cds-C9F07_11455;Parent=gene-C9F07_11455;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455638.1;locus_tag=C9F07_11455;product=major curlin subunit CsgA;pseudo=true;transl_table=11 PYKI01001224.1 Genbank gene 259 687 . - . ID=gene-C9F07_11460;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=C9F07_11460 PYKI01001224.1 Protein Homology CDS 259 687 . - 0 ID=cds-TGD91147.1;Parent=gene-C9F07_11460;Dbxref=NCBI_GP:TGD91147.1;Name=TGD91147.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784337.1;locus_tag=C9F07_11460;product=curlin minor subunit CsgB;protein_id=TGD91147.1;transl_table=11 ##sequence-region PYKI01000492.1 1 688 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000492.1 Genbank region 1 688 . + . ID=PYKI01000492.1:1..688;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000492.1 Genbank gene 8 589 . + . ID=gene-C9F07_03970;Name=C9F07_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03970 PYKI01000492.1 Protein Homology CDS 8 589 . + 0 ID=cds-TGE17767.1;Parent=gene-C9F07_03970;Dbxref=NCBI_GP:TGE17767.1;Name=TGE17767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458413.1;locus_tag=C9F07_03970;product=pilus assembly protein PilN;protein_id=TGE17767.1;transl_table=11 ##sequence-region PYKI01000802.1 1 687 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000802.1 Genbank region 1 687 . + . ID=PYKI01000802.1:1..687;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000802.1 Genbank gene 1 687 . + . ID=gene-C9F07_07230;Name=C9F07_07230;end_range=687,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07230;partial=true;start_range=.,1 PYKI01000802.1 Protein Homology CDS 1 687 . + 1 ID=cds-TGE09134.1;Parent=gene-C9F07_07230;Dbxref=NCBI_GP:TGE09134.1;Name=TGE09134.1;end_range=687,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457773.1;locus_tag=C9F07_07230;partial=true;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=TGE09134.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002164.1 1 687 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002164.1 Genbank region 1 687 . + . ID=PYKI01002164.1:1..687;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002164.1 Genbank pseudogene 58 654 . + . ID=gene-C9F07_21015;Name=C9F07_21015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21015;pseudo=true PYKI01002164.1 Protein Homology CDS 58 654 . + 0 ID=cds-C9F07_21015;Parent=gene-C9F07_21015;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=C9F07_21015;product=SgcQ protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001248.1 1 686 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001248.1 Genbank region 1 686 . + . ID=PYKI01001248.1:1..686;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001248.1 Genbank gene 6 686 . + . ID=gene-C9F07_11635;Name=C9F07_11635;end_range=686,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11635;partial=true PYKI01001248.1 Protein Homology CDS 6 686 . + 0 ID=cds-TGD90167.1;Parent=gene-C9F07_11635;Dbxref=NCBI_GP:TGD90167.1;Name=TGD90167.1;end_range=686,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541058.1;locus_tag=C9F07_11635;partial=true;product=hypothetical protein;protein_id=TGD90167.1;transl_table=11 ##sequence-region PYKI01002803.1 1 686 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002803.1 Genbank region 1 686 . + . ID=PYKI01002803.1:1..686;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002803.1 Genbank gene 1 144 . - . ID=gene-C9F07_28060;Name=C9F07_28060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28060;partial=true;start_range=.,1 PYKI01002803.1 Protein Homology CDS 1 144 . - 0 ID=cds-TGD45812.1;Parent=gene-C9F07_28060;Dbxref=NCBI_GP:TGD45812.1;Name=TGD45812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458309.1;locus_tag=C9F07_28060;partial=true;product=AsmA family protein;protein_id=TGD45812.1;start_range=.,1;transl_table=11 PYKI01002803.1 Genbank pseudogene 254 637 . - . ID=gene-C9F07_28065;Name=C9F07_28065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28065;pseudo=true PYKI01002803.1 Protein Homology CDS 254 637 . - 0 ID=cds-C9F07_28065;Parent=gene-C9F07_28065;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458308.1;locus_tag=C9F07_28065;product=cyclic-guanylate-specific phosphodiesterase;pseudo=true;transl_table=11 ##sequence-region PYKI01001801.1 1 686 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001801.1 Genbank region 1 686 . + . ID=PYKI01001801.1:1..686;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001801.1 Genbank gene 1 686 . + . ID=gene-C9F07_17355;Name=C9F07_17355;end_range=686,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17355;partial=true;start_range=.,1 PYKI01001801.1 Protein Homology CDS 1 686 . + 1 ID=cds-TGD65906.1;Parent=gene-C9F07_17355;Dbxref=NCBI_GP:TGD65906.1;Name=TGD65906.1;end_range=686,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458786.1;locus_tag=C9F07_17355;partial=true;product=miniconductance mechanosensitive channel MscM;protein_id=TGD65906.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002961.1 1 685 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002961.1 Genbank region 1 685 . + . ID=PYKI01002961.1:1..685;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002961.1 Genbank gene 1 576 . + . ID=gene-C9F07_29685;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=C9F07_29685;partial=true;start_range=.,1 PYKI01002961.1 Protein Homology CDS 1 576 . + 0 ID=cds-TGD41883.1;Parent=gene-C9F07_29685;Dbxref=NCBI_GP:TGD41883.1;Name=TGD41883.1;gbkey=CDS;gene=selD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=C9F07_29685;partial=true;product=selenide%2C water dikinase SelD;protein_id=TGD41883.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002681.1 1 685 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002681.1 Genbank region 1 685 . + . ID=PYKI01002681.1:1..685;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002681.1 Genbank gene 1 685 . + . ID=gene-C9F07_26715;Name=C9F07_26715;end_range=685,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26715;partial=true;start_range=.,1 PYKI01002681.1 Protein Homology CDS 1 685 . + 0 ID=cds-TGD48666.1;Parent=gene-C9F07_26715;Dbxref=NCBI_GP:TGD48666.1;Name=TGD48666.1;end_range=685,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456103.1;locus_tag=C9F07_26715;partial=true;product=cyclopropane-fatty-acyl-phospholipid synthase;protein_id=TGD48666.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000676.1 1 685 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000676.1 Genbank region 1 685 . + . ID=PYKI01000676.1:1..685;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000676.1 Genbank gene 1 348 . + . ID=gene-C9F07_05875;Name=C9F07_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05875;partial=true;start_range=.,1 PYKI01000676.1 Protein Homology CDS 1 348 . + 0 ID=cds-TGE11675.1;Parent=gene-C9F07_05875;Dbxref=NCBI_GP:TGE11675.1;Name=TGE11675.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456652.1;locus_tag=C9F07_05875;partial=true;product=phosphomannomutase CpsG;protein_id=TGE11675.1;start_range=.,1;transl_table=11 PYKI01000676.1 Genbank pseudogene 402 650 . + . ID=gene-C9F07_05880;Name=C9F07_05880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05880;pseudo=true PYKI01000676.1 Protein Homology CDS 402 650 . + 0 ID=cds-C9F07_05880;Parent=gene-C9F07_05880;Note=WcaJ%3B glucose-1-phosphate transferase responsible for the addition of the first glucose-1-phosphate from UDP-glucose to the lipid carrier undecaprenyl phosphate in the biosynthesis of colanic acid%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310879.1;locus_tag=C9F07_05880;product=undecaprenyl-phosphate glucose phosphotransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01003258.1 1 685 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003258.1 Genbank region 1 685 . + . ID=PYKI01003258.1:1..685;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003258.1 Genbank pseudogene 69 685 . + . ID=gene-C9F07_32760;Name=C9F07_32760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32760;pseudo=true PYKI01003258.1 Protein Homology CDS 69 685 . + 0 ID=cds-C9F07_32760;Parent=gene-C9F07_32760;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455015.1;locus_tag=C9F07_32760;product=aldo/keto reductase;pseudo=true;transl_table=11 ##sequence-region PYKI01000893.1 1 685 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000893.1 Genbank region 1 685 . + . ID=PYKI01000893.1:1..685;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000893.1 Genbank pseudogene 77 685 . + . ID=gene-C9F07_08170;Name=priA;gbkey=Gene;gene=priA;gene_biotype=pseudogene;locus_tag=C9F07_08170;pseudo=true PYKI01000893.1 Protein Homology CDS 77 685 . + 0 ID=cds-C9F07_08170;Parent=gene-C9F07_08170;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457957.1;locus_tag=C9F07_08170;product=primosomal protein N';pseudo=true;transl_table=11 ##sequence-region PYKI01002033.1 1 685 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002033.1 Genbank region 1 685 . + . ID=PYKI01002033.1:1..685;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002033.1 Genbank gene 1 685 . + . ID=gene-C9F07_19635;Name=C9F07_19635;end_range=685,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19635;partial=true;start_range=.,1 PYKI01002033.1 Protein Homology CDS 1 685 . + 0 ID=cds-TGD60022.1;Parent=gene-C9F07_19635;Dbxref=NCBI_GP:TGD60022.1;Name=TGD60022.1;end_range=685,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=C9F07_19635;partial=true;product=PTS galactitol transporter subunit IIC;protein_id=TGD60022.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001405.1 1 685 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001405.1 Genbank region 1 685 . + . ID=PYKI01001405.1:1..685;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001405.1 Genbank pseudogene 1 593 . - . ID=gene-C9F07_13295;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=pseudogene;locus_tag=C9F07_13295;pseudo=true PYKI01001405.1 Protein Homology CDS 1 593 . - 0 ID=cds-C9F07_13295;Parent=gene-C9F07_13295;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=phnU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459422.1;locus_tag=C9F07_13295;product=2-aminoethylphosphonate ABC transporter permease subunit;pseudo=true;transl_table=11 ##sequence-region PYKI01001700.1 1 684 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001700.1 Genbank region 1 684 . + . ID=PYKI01001700.1:1..684;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001700.1 Genbank gene 1 684 . - . ID=gene-C9F07_16220;Name=C9F07_16220;end_range=684,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16220;partial=true;start_range=.,1 PYKI01001700.1 Protein Homology CDS 1 684 . - 1 ID=cds-TGD69395.1;Parent=gene-C9F07_16220;Dbxref=NCBI_GP:TGD69395.1;Name=TGD69395.1;end_range=684,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=C9F07_16220;partial=true;product=aminopeptidase;protein_id=TGD69395.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000125.1 1 684 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000125.1 Genbank region 1 684 . + . ID=PYKI01000125.1:1..684;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000125.1 Genbank gene 1 684 . - . ID=gene-C9F07_00840;Name=C9F07_00840;end_range=684,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00840;partial=true;start_range=.,1 PYKI01000125.1 Protein Homology CDS 1 684 . - 0 ID=cds-TGE30102.1;Parent=gene-C9F07_00840;Dbxref=NCBI_GP:TGE30102.1;Name=TGE30102.1;end_range=684,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=C9F07_00840;partial=true;product=serine hydroxymethyltransferase;protein_id=TGE30102.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000923.1 1 684 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000923.1 Genbank region 1 684 . + . ID=PYKI01000923.1:1..684;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000923.1 Genbank gene 1 612 . - . ID=gene-C9F07_08415;Name=C9F07_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08415;partial=true;start_range=.,1 PYKI01000923.1 Protein Homology CDS 1 612 . - 0 ID=cds-TGE02901.1;Parent=gene-C9F07_08415;Dbxref=NCBI_GP:TGE02901.1;Name=TGE02901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000127371.1;locus_tag=C9F07_08415;partial=true;product=dimethyl sulfoxide reductase subunit A;protein_id=TGE02901.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000916.1 1 683 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000916.1 Genbank region 1 683 . + . ID=PYKI01000916.1:1..683;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000916.1 Genbank gene 1 444 . + . ID=gene-C9F07_08340;Name=C9F07_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08340;partial=true;start_range=.,1 PYKI01000916.1 Protein Homology CDS 1 444 . + 0 ID=cds-TGE03008.1;Parent=gene-C9F07_08340;Dbxref=NCBI_GP:TGE03008.1;Name=TGE03008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=C9F07_08340;partial=true;product=DNA exonuclease SbcCD subunit SbcD;protein_id=TGE03008.1;start_range=.,1;transl_table=11 PYKI01000916.1 Genbank gene 441 683 . + . ID=gene-C9F07_08345;Name=C9F07_08345;end_range=683,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08345;partial=true PYKI01000916.1 Protein Homology CDS 441 683 . + 0 ID=cds-TGE03009.1;Parent=gene-C9F07_08345;Dbxref=NCBI_GP:TGE03009.1;Name=TGE03009.1;end_range=683,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454989.1;locus_tag=C9F07_08345;partial=true;product=hypothetical protein;protein_id=TGE03009.1;transl_table=11 ##sequence-region PYKI01001390.1 1 683 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001390.1 Genbank region 1 683 . + . ID=PYKI01001390.1:1..683;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001390.1 Genbank gene 1 538 . + . ID=gene-C9F07_13095;Name=C9F07_13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13095;partial=true;start_range=.,1 PYKI01001390.1 Protein Homology CDS 1 538 . + 1 ID=cds-TGD84232.1;Parent=gene-C9F07_13095;Dbxref=NCBI_GP:TGD84232.1;Name=TGD84232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457026.1;locus_tag=C9F07_13095;partial=true;product=glycerate 2-kinase;protein_id=TGD84232.1;start_range=.,1;transl_table=11 PYKI01001390.1 Genbank gene 584 683 . - . ID=gene-C9F07_13100;Name=bcp;end_range=683,.;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=C9F07_13100;partial=true PYKI01001390.1 Protein Homology CDS 584 683 . - 1 ID=cds-TGD84233.1;Parent=gene-C9F07_13100;Dbxref=NCBI_GP:TGD84233.1;Name=TGD84233.1;Note=bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine;end_range=683,.;gbkey=CDS;gene=bcp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457025.1;locus_tag=C9F07_13100;partial=true;product=peroxiredoxin;protein_id=TGD84233.1;transl_table=11 ##sequence-region PYKI01003531.1 1 3330 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003531.1 Genbank region 1 3330 . + . ID=PYKI01003531.1:1..3330;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003531.1 Genbank gene 1 678 . - . ID=gene-C9F07_35655;Name=C9F07_35655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35655;partial=true;start_range=.,1 PYKI01003531.1 Protein Homology CDS 1 678 . - 0 ID=cds-TGD31215.1;Parent=gene-C9F07_35655;Dbxref=NCBI_GP:TGD31215.1;Name=TGD31215.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456774.1;locus_tag=C9F07_35655;partial=true;product=microcin ABC transporter permease;protein_id=TGD31215.1;start_range=.,1;transl_table=11 PYKI01003531.1 Genbank gene 688 2493 . - . ID=gene-C9F07_35660;Name=C9F07_35660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35660 PYKI01003531.1 Protein Homology CDS 688 2493 . - 0 ID=cds-TGD31216.1;Parent=gene-C9F07_35660;Dbxref=NCBI_GP:TGD31216.1;Name=TGD31216.1;Note=with YejBEF is involved in resistance to microcin C;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456773.1;locus_tag=C9F07_35660;product=ABC transporter substrate-binding protein;protein_id=TGD31216.1;transl_table=11 PYKI01003531.1 Genbank pseudogene 2600 3313 . - . ID=gene-C9F07_35665;Name=C9F07_35665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35665;pseudo=true PYKI01003531.1 Protein Homology CDS 2600 3313 . - 0 ID=cds-C9F07_35665;Parent=gene-C9F07_35665;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=C9F07_35665;product=cyclic di-GMP phosphodiesterase;pseudo=true;transl_table=11 ##sequence-region PYKI01003223.1 1 683 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003223.1 Genbank region 1 683 . + . ID=PYKI01003223.1:1..683;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003223.1 Genbank pseudogene 56 683 . + . ID=gene-C9F07_32445;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=pseudogene;locus_tag=C9F07_32445;pseudo=true PYKI01003223.1 Protein Homology CDS 56 683 . + 0 ID=cds-C9F07_32445;Parent=gene-C9F07_32445;Note=responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=tldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457744.1;locus_tag=C9F07_32445;product=metalloprotease TldD;pseudo=true;transl_table=11 ##sequence-region PYKI01001494.1 1 682 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001494.1 Genbank region 1 682 . + . ID=PYKI01001494.1:1..682;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001494.1 Genbank gene 1 413 . - . ID=gene-C9F07_14220;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;gene_synonym=metM;locus_tag=C9F07_14220;partial=true;start_range=.,1 PYKI01001494.1 Protein Homology CDS 1 413 . - 0 ID=cds-TGD78714.1;Parent=gene-C9F07_14220;Dbxref=NCBI_GP:TGD78714.1;Name=TGD78714.1;Note=multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=C9F07_14220;partial=true;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=TGD78714.1;start_range=.,1;transl_table=11 PYKI01001494.1 Genbank gene 416 682 . - . ID=gene-C9F07_14225;Name=C9F07_14225;end_range=682,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14225;partial=true PYKI01001494.1 Protein Homology CDS 416 682 . - 0 ID=cds-TGD78715.1;Parent=gene-C9F07_14225;Dbxref=NCBI_GP:TGD78715.1;Name=TGD78715.1;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;end_range=682,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457953.1;locus_tag=C9F07_14225;partial=true;product=cystathionine gamma-synthase;protein_id=TGD78715.1;transl_table=11 ##sequence-region PYKI01000634.1 1 682 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000634.1 Genbank region 1 682 . + . ID=PYKI01000634.1:1..682;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000634.1 Genbank gene 115 682 . + . ID=gene-C9F07_05470;Name=C9F07_05470;end_range=682,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05470;partial=true PYKI01000634.1 Protein Homology CDS 115 682 . + 0 ID=cds-TGE13079.1;Parent=gene-C9F07_05470;Dbxref=NCBI_GP:TGE13079.1;Name=TGE13079.1;end_range=682,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458540.1;locus_tag=C9F07_05470;partial=true;product=conjugal transfer protein;protein_id=TGE13079.1;transl_table=11 ##sequence-region PYKI01001472.1 1 681 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001472.1 Genbank region 1 681 . + . ID=PYKI01001472.1:1..681;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001472.1 Genbank gene 250 681 . + . ID=gene-C9F07_13960;Name=C9F07_13960;end_range=681,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13960;partial=true PYKI01001472.1 Protein Homology CDS 250 681 . + 0 ID=cds-TGD81028.1;Parent=gene-C9F07_13960;Dbxref=NCBI_GP:TGD81028.1;Name=TGD81028.1;end_range=681,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=C9F07_13960;partial=true;product=XRE family transcriptional regulator;protein_id=TGD81028.1;transl_table=11 ##sequence-region PYKI01003415.1 1 681 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003415.1 Genbank region 1 681 . + . ID=PYKI01003415.1:1..681;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003415.1 Genbank gene 150 362 . + . ID=gene-C9F07_34345;Name=C9F07_34345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34345 PYKI01003415.1 Protein Homology CDS 150 362 . + 0 ID=cds-TGD33741.1;Parent=gene-C9F07_34345;Dbxref=NCBI_GP:TGD33741.1;Name=TGD33741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311463.1;locus_tag=C9F07_34345;product=hypothetical protein;protein_id=TGD33741.1;transl_table=11 PYKI01003415.1 Genbank gene 316 681 . - . ID=gene-C9F07_34350;Name=phoR;end_range=681,.;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=C9F07_34350;partial=true PYKI01003415.1 Protein Homology CDS 316 681 . - 0 ID=cds-TGD33742.1;Parent=gene-C9F07_34350;Dbxref=NCBI_GP:TGD33742.1;Name=TGD33742.1;Note=membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB;end_range=681,.;gbkey=CDS;gene=phoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454992.1;locus_tag=C9F07_34350;partial=true;product=two-component system sensor histidine kinase PhoR;protein_id=TGD33742.1;transl_table=11 ##sequence-region PYKI01002743.1 1 681 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002743.1 Genbank region 1 681 . + . ID=PYKI01002743.1:1..681;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002743.1 Genbank gene 1 260 . - . ID=gene-C9F07_27385;Name=C9F07_27385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27385;partial=true;start_range=.,1 PYKI01002743.1 Protein Homology CDS 1 260 . - 0 ID=cds-TGD47069.1;Parent=gene-C9F07_27385;Dbxref=NCBI_GP:TGD47069.1;Name=TGD47069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=C9F07_27385;partial=true;product=hydrogenase 1 b-type cytochrome subunit;protein_id=TGD47069.1;start_range=.,1;transl_table=11 PYKI01002743.1 Genbank gene 279 681 . - . ID=gene-C9F07_27390;Name=C9F07_27390;end_range=681,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27390;partial=true PYKI01002743.1 Protein Homology CDS 279 681 . - 1 ID=cds-TGD47070.1;Parent=gene-C9F07_27390;Dbxref=NCBI_GP:TGD47070.1;Name=TGD47070.1;end_range=681,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456296.1;locus_tag=C9F07_27390;partial=true;product=hypothetical protein;protein_id=TGD47070.1;transl_table=11 ##sequence-region PYKI01000430.1 1 681 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000430.1 Genbank region 1 681 . + . ID=PYKI01000430.1:1..681;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000430.1 Genbank pseudogene 58 609 . + . ID=gene-C9F07_03320;Name=C9F07_03320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03320;pseudo=true PYKI01000430.1 Protein Homology CDS 58 609 . + 0 ID=cds-C9F07_03320;Parent=gene-C9F07_03320;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=C9F07_03320;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001172.1 1 681 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001172.1 Genbank region 1 681 . + . ID=PYKI01001172.1:1..681;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001172.1 Genbank pseudogene 1 600 . - . ID=gene-C9F07_10950;Name=panF;gbkey=Gene;gene=panF;gene_biotype=pseudogene;locus_tag=C9F07_10950;pseudo=true PYKI01001172.1 Protein Homology CDS 1 600 . - 0 ID=cds-C9F07_10950;Parent=gene-C9F07_10950;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=panF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457758.1;locus_tag=C9F07_10950;product=sodium/panthothenate symporter;pseudo=true;transl_table=11 ##sequence-region PYKI01000070.1 1 680 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000070.1 Genbank region 1 680 . + . ID=PYKI01000070.1:1..680;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000070.1 cmsearch riboswitch 268 466 . + . ID=id-PYKI01000070.1:268..466;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00050,COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PYKI01000070.1 Genbank gene 572 680 . + . ID=gene-C9F07_00430;Name=ribB;end_range=680,.;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=C9F07_00430;partial=true PYKI01000070.1 Protein Homology CDS 572 680 . + 0 ID=cds-TGE30169.1;Parent=gene-C9F07_00430;Dbxref=NCBI_GP:TGE30169.1;Name=TGE30169.1;Note=DHBP synthase%3B functions during riboflavin biosynthesis;end_range=680,.;gbkey=CDS;gene=ribB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457586.1;locus_tag=C9F07_00430;partial=true;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=TGE30169.1;transl_table=11 ##sequence-region PYKI01001146.1 1 680 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001146.1 Genbank region 1 680 . + . ID=PYKI01001146.1:1..680;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001146.1 Genbank gene 65 680 . - . ID=gene-C9F07_10685;Name=C9F07_10685;end_range=680,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10685;partial=true PYKI01001146.1 Protein Homology CDS 65 680 . - 1 ID=cds-TGD94047.1;Parent=gene-C9F07_10685;Dbxref=NCBI_GP:TGD94047.1;Name=TGD94047.1;end_range=680,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456153.1;locus_tag=C9F07_10685;partial=true;product=Fe-S cluster assembly ATPase SufC;protein_id=TGD94047.1;transl_table=11 ##sequence-region PYKI01002903.1 1 3329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002903.1 Genbank region 1 3329 . + . ID=PYKI01002903.1:1..3329;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002903.1 Genbank gene 1 309 . + . ID=gene-C9F07_29075;Name=C9F07_29075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29075;partial=true;start_range=.,1 PYKI01002903.1 Protein Homology CDS 1 309 . + 0 ID=cds-TGD43708.1;Parent=gene-C9F07_29075;Dbxref=NCBI_GP:TGD43708.1;Name=TGD43708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458959.1;locus_tag=C9F07_29075;partial=true;product=hypothetical protein;protein_id=TGD43708.1;start_range=.,1;transl_table=11 PYKI01002903.1 Genbank gene 312 1049 . + . ID=gene-C9F07_29080;Name=C9F07_29080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29080 PYKI01002903.1 Protein Homology CDS 312 1049 . + 0 ID=cds-TGD43709.1;Parent=gene-C9F07_29080;Dbxref=NCBI_GP:TGD43709.1;Name=TGD43709.1;Note=acts to load the DnaB helicase onto the initiation site during DNA replication;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001731874.1;locus_tag=C9F07_29080;product=DNA replication protein DnaC;protein_id=TGD43709.1;transl_table=11 PYKI01002903.1 Genbank gene 1107 1598 . + . ID=gene-C9F07_29085;Name=C9F07_29085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29085 PYKI01002903.1 Protein Homology CDS 1107 1598 . + 0 ID=cds-TGD43710.1;Parent=gene-C9F07_29085;Dbxref=NCBI_GP:TGD43710.1;Name=TGD43710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458957.1;locus_tag=C9F07_29085;product=DUF2501 domain-containing protein;protein_id=TGD43710.1;transl_table=11 PYKI01002903.1 Genbank pseudogene 1881 3329 . + . ID=gene-C9F07_29090;Name=C9F07_29090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29090;pseudo=true PYKI01002903.1 Protein Homology CDS 1881 3329 . + 0 ID=cds-C9F07_29090;Parent=gene-C9F07_29090;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458956.1;locus_tag=C9F07_29090;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01002755.1 1 679 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002755.1 Genbank region 1 679 . + . ID=PYKI01002755.1:1..679;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002755.1 Genbank gene 1 287 . + . ID=gene-C9F07_27495;Name=C9F07_27495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27495;partial=true;start_range=.,1 PYKI01002755.1 Protein Homology CDS 1 287 . + 2 ID=cds-TGD46843.1;Parent=gene-C9F07_27495;Dbxref=NCBI_GP:TGD46843.1;Name=TGD46843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456929.1;locus_tag=C9F07_27495;partial=true;product=multifunctional fatty acid oxidation complex subunit alpha;protein_id=TGD46843.1;start_range=.,1;transl_table=11 PYKI01002755.1 Genbank gene 496 679 . + . ID=gene-C9F07_27500;Name=sixA;end_range=679,.;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=C9F07_27500;partial=true PYKI01002755.1 Protein Homology CDS 496 679 . + 0 ID=cds-TGD46844.1;Parent=gene-C9F07_27500;Dbxref=NCBI_GP:TGD46844.1;Name=TGD46844.1;end_range=679,.;gbkey=CDS;gene=sixA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=C9F07_27500;partial=true;product=phosphohistidine phosphatase SixA;protein_id=TGD46844.1;transl_table=11 ##sequence-region PYKI01003154.1 1 678 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003154.1 Genbank region 1 678 . + . ID=PYKI01003154.1:1..678;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003154.1 Genbank gene 1 180 . - . ID=gene-C9F07_31630;Name=C9F07_31630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31630;partial=true;start_range=.,1 PYKI01003154.1 Protein Homology CDS 1 180 . - 0 ID=cds-TGD38345.1;Parent=gene-C9F07_31630;Dbxref=NCBI_GP:TGD38345.1;Name=TGD38345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458370.1;locus_tag=C9F07_31630;partial=true;product=hypothetical protein;protein_id=TGD38345.1;start_range=.,1;transl_table=11 PYKI01003154.1 Genbank gene 234 678 . - . ID=gene-C9F07_31635;Name=C9F07_31635;end_range=678,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31635;partial=true PYKI01003154.1 Protein Homology CDS 234 678 . - 1 ID=cds-TGD38346.1;Parent=gene-C9F07_31635;Dbxref=NCBI_GP:TGD38346.1;Name=TGD38346.1;end_range=678,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=C9F07_31635;partial=true;product=cytoplasmic protein;protein_id=TGD38346.1;transl_table=11 ##sequence-region PYKI01001967.1 1 678 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001967.1 Genbank region 1 678 . + . ID=PYKI01001967.1:1..678;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001967.1 Genbank gene 1 678 . - . ID=gene-C9F07_18970;Name=C9F07_18970;end_range=678,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18970;partial=true;start_range=.,1 PYKI01001967.1 Protein Homology CDS 1 678 . - 2 ID=cds-TGD60341.1;Parent=gene-C9F07_18970;Dbxref=NCBI_GP:TGD60341.1;Name=TGD60341.1;Note=cleaves DNA 25 basepairs downstream from the recognition site;end_range=678,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=C9F07_18970;partial=true;product=type III restriction endonuclease subunit R;protein_id=TGD60341.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002962.1 1 678 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002962.1 Genbank region 1 678 . + . ID=PYKI01002962.1:1..678;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002962.1 Genbank pseudogene 1 589 . - . ID=gene-C9F07_29690;Name=C9F07_29690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29690;pseudo=true PYKI01002962.1 Protein Homology CDS 1 589 . - 0 ID=cds-C9F07_29690;Parent=gene-C9F07_29690;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312698.1;locus_tag=C9F07_29690;product=glutamine--fructose-6-phosphate aminotransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01000825.1 1 678 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000825.1 Genbank region 1 678 . + . ID=PYKI01000825.1:1..678;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000825.1 Genbank gene 1 678 . - . ID=gene-C9F07_07520;Name=C9F07_07520;end_range=678,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07520;partial=true;start_range=.,1 PYKI01000825.1 Protein Homology CDS 1 678 . - 2 ID=cds-TGE07355.1;Parent=gene-C9F07_07520;Dbxref=NCBI_GP:TGE07355.1;Name=TGE07355.1;Note=catalyzes the production of hydrogen sulfide from thiosulfate;end_range=678,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=C9F07_07520;partial=true;product=thiosulfate reductase PhsA;protein_id=TGE07355.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002918.1 1 677 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002918.1 Genbank region 1 677 . + . ID=PYKI01002918.1:1..677;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002918.1 Genbank gene 1 404 . - . ID=gene-C9F07_29255;Name=C9F07_29255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29255;partial=true;start_range=.,1 PYKI01002918.1 Protein Homology CDS 1 404 . - 0 ID=cds-TGD43390.1;Parent=gene-C9F07_29255;Dbxref=NCBI_GP:TGD43390.1;Name=TGD43390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=C9F07_29255;partial=true;product=DNA oxidative demethylase AlkB;protein_id=TGD43390.1;start_range=.,1;transl_table=11 PYKI01002918.1 Genbank gene 407 677 . - . ID=gene-C9F07_29260;Name=C9F07_29260;end_range=677,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29260;partial=true PYKI01002918.1 Protein Homology CDS 407 677 . - 1 ID=cds-TGD43391.1;Parent=gene-C9F07_29260;Dbxref=NCBI_GP:TGD43391.1;Name=TGD43391.1;Note=regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine;end_range=677,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456810.1;locus_tag=C9F07_29260;partial=true;product=bifunctional transcriptional activator/DNA repair enzyme protein Ada;protein_id=TGD43391.1;transl_table=11 ##sequence-region PYKI01000743.1 1 676 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000743.1 Genbank region 1 676 . + . ID=PYKI01000743.1:1..676;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000743.1 Genbank gene 1 621 . + . ID=gene-C9F07_06540;Name=C9F07_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06540;partial=true;start_range=.,1 PYKI01000743.1 Protein Homology CDS 1 621 . + 0 ID=cds-TGE10770.1;Parent=gene-C9F07_06540;Dbxref=NCBI_GP:TGE10770.1;Name=TGE10770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=C9F07_06540;partial=true;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=TGE10770.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000760.1 1 675 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000760.1 Genbank region 1 675 . + . ID=PYKI01000760.1:1..675;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000760.1 Genbank gene 1 587 . - . ID=gene-C9F07_06700;Name=C9F07_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06700;partial=true;start_range=.,1 PYKI01000760.1 Protein Homology CDS 1 587 . - 0 ID=cds-TGE09250.1;Parent=gene-C9F07_06700;Dbxref=NCBI_GP:TGE09250.1;Name=TGE09250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457102.1;locus_tag=C9F07_06700;partial=true;product=oxidoreductase;protein_id=TGE09250.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001695.1 1 674 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001695.1 Genbank region 1 674 . + . ID=PYKI01001695.1:1..674;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001695.1 Genbank gene 493 674 . + . ID=gene-C9F07_16175;Name=C9F07_16175;end_range=674,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16175;partial=true PYKI01001695.1 Protein Homology CDS 493 674 . + 0 ID=cds-TGD69408.1;Parent=gene-C9F07_16175;Dbxref=NCBI_GP:TGD69408.1;Name=TGD69408.1;end_range=674,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458743.1;locus_tag=C9F07_16175;partial=true;product=hypothetical protein;protein_id=TGD69408.1;transl_table=11 ##sequence-region PYKI01000382.1 1 674 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000382.1 Genbank region 1 674 . + . ID=PYKI01000382.1:1..674;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000382.1 Genbank gene 1 674 . + . ID=gene-C9F07_02890;Name=C9F07_02890;end_range=674,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02890;partial=true;start_range=.,1 PYKI01000382.1 Protein Homology CDS 1 674 . + 0 ID=cds-TGE23174.1;Parent=gene-C9F07_02890;Dbxref=NCBI_GP:TGE23174.1;Name=TGE23174.1;end_range=674,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=C9F07_02890;partial=true;product=autotransporter domain-containing esterase;protein_id=TGE23174.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003010.1 1 3324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003010.1 Genbank region 1 3324 . + . ID=PYKI01003010.1:1..3324;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003010.1 Genbank gene 1 162 . - . ID=gene-C9F07_30165;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9F07_30165;partial=true;start_range=.,1 PYKI01003010.1 Protein Homology CDS 1 162 . - 0 ID=cds-TGD41194.1;Parent=gene-C9F07_30165;Dbxref=NCBI_GP:TGD41194.1;Name=TGD41194.1;Note=plays a role in hydrogenase nickel cofactor insertion;gbkey=CDS;gene=hypA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457539.1;locus_tag=C9F07_30165;partial=true;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=TGD41194.1;start_range=.,1;transl_table=11 PYKI01003010.1 Genbank gene 155 643 . - . ID=gene-C9F07_30170;Name=C9F07_30170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30170 PYKI01003010.1 Protein Homology CDS 155 643 . - 0 ID=cds-TGD41195.1;Parent=gene-C9F07_30170;Dbxref=NCBI_GP:TGD41195.1;Name=TGD41195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457540.1;locus_tag=C9F07_30170;product=hydrogenase 2-specific chaperone;protein_id=TGD41195.1;transl_table=11 PYKI01003010.1 Genbank gene 636 1130 . - . ID=gene-C9F07_30175;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=C9F07_30175 PYKI01003010.1 Protein Homology CDS 636 1130 . - 0 ID=cds-TGD41196.1;Parent=gene-C9F07_30175;Dbxref=NCBI_GP:TGD41196.1;Name=TGD41196.1;gbkey=CDS;gene=hybD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157468.1;locus_tag=C9F07_30175;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=TGD41196.1;transl_table=11 PYKI01003010.1 Genbank gene 1130 2833 . - . ID=gene-C9F07_30180;Name=C9F07_30180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30180 PYKI01003010.1 Protein Homology CDS 1130 2833 . - 0 ID=cds-TGD41197.1;Parent=gene-C9F07_30180;Dbxref=NCBI_GP:TGD41197.1;Name=TGD41197.1;Note=involved in hydrogen uptake;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457542.1;locus_tag=C9F07_30180;product=hydrogenase 2 large subunit;protein_id=TGD41197.1;transl_table=11 PYKI01003010.1 Genbank gene 2830 3324 . - . ID=gene-C9F07_30185;Name=C9F07_30185;end_range=3324,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30185;partial=true PYKI01003010.1 Protein Homology CDS 2830 3324 . - 0 ID=cds-TGD41198.1;Parent=gene-C9F07_30185;Dbxref=NCBI_GP:TGD41198.1;Name=TGD41198.1;Note=HybB%3B cytochrome b subunit of the hydrogenase 2 enzyme%2C composed of HybA%2C B%2C C%2C and O subunits;end_range=3324,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=C9F07_30185;partial=true;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=TGD41198.1;transl_table=11 ##sequence-region PYKI01000748.1 1 674 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000748.1 Genbank region 1 674 . + . ID=PYKI01000748.1:1..674;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000748.1 Genbank gene 1 280 . + . ID=gene-C9F07_06605;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=C9F07_06605;partial=true;start_range=.,1 PYKI01000748.1 Protein Homology CDS 1 280 . + 1 ID=cds-TGE10715.1;Parent=gene-C9F07_06605;Dbxref=NCBI_GP:TGE10715.1;Name=TGE10715.1;Note=catalyzes the formation of serine from O-phosphoserine;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458986.1;locus_tag=C9F07_06605;partial=true;product=phosphoserine phosphatase;protein_id=TGE10715.1;start_range=.,1;transl_table=11 PYKI01000748.1 Genbank gene 364 674 . + . ID=gene-C9F07_06610;Name=C9F07_06610;end_range=674,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06610;partial=true PYKI01000748.1 Protein Homology CDS 364 674 . + 0 ID=cds-TGE10716.1;Parent=gene-C9F07_06610;Dbxref=NCBI_GP:TGE10716.1;Name=TGE10716.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;end_range=674,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=C9F07_06610;partial=true;product=DNA repair protein RadA;protein_id=TGE10716.1;transl_table=11 ##sequence-region PYKI01001861.1 1 674 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001861.1 Genbank region 1 674 . + . ID=PYKI01001861.1:1..674;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001861.1 Genbank gene 1 674 . + . ID=gene-C9F07_17895;Name=rne;end_range=674,.;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=C9F07_17895;partial=true;start_range=.,1 PYKI01001861.1 Protein Homology CDS 1 674 . + 1 ID=cds-TGD62972.1;Parent=gene-C9F07_17895;Dbxref=NCBI_GP:TGD62972.1;Name=TGD62972.1;Note=bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein%3B forms part of the membrane-associated degradosome complex along with PNPase%2C RhlB%2C and enolase;end_range=674,.;gbkey=CDS;gene=rne;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455679.1;locus_tag=C9F07_17895;partial=true;product=ribonuclease E;protein_id=TGD62972.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002067.1 1 673 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002067.1 Genbank region 1 673 . + . ID=PYKI01002067.1:1..673;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002067.1 Genbank gene 1 334 . + . ID=gene-C9F07_20005;Name=C9F07_20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20005;partial=true;start_range=.,1 PYKI01002067.1 Protein Homology CDS 1 334 . + 1 ID=cds-TGD59348.1;Parent=gene-C9F07_20005;Dbxref=NCBI_GP:TGD59348.1;Name=TGD59348.1;Note=involved in invasion of epithelial cells;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=C9F07_20005;partial=true;product=intimin-like inverse autotransporter protein SinH;protein_id=TGD59348.1;start_range=.,1;transl_table=11 PYKI01002067.1 Genbank gene 392 673 . + . ID=gene-C9F07_20010;Name=C9F07_20010;end_range=673,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20010;partial=true PYKI01002067.1 Protein Homology CDS 392 673 . + 0 ID=cds-TGD59349.1;Parent=gene-C9F07_20010;Dbxref=NCBI_GP:TGD59349.1;Name=TGD59349.1;end_range=673,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457049.1;locus_tag=C9F07_20010;partial=true;product=hypothetical protein;protein_id=TGD59349.1;transl_table=11 ##sequence-region PYKI01000419.1 1 673 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000419.1 Genbank region 1 673 . + . ID=PYKI01000419.1:1..673;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000419.1 Genbank gene 1 420 . + . ID=gene-C9F07_03230;Name=C9F07_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03230;partial=true;start_range=.,1 PYKI01000419.1 Protein Homology CDS 1 420 . + 0 ID=cds-TGE20863.1;Parent=gene-C9F07_03230;Dbxref=NCBI_GP:TGE20863.1;Name=TGE20863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=C9F07_03230;partial=true;product=SAM-dependent methyltransferase;protein_id=TGE20863.1;start_range=.,1;transl_table=11 PYKI01000419.1 Genbank gene 417 673 . - . ID=gene-C9F07_03235;Name=C9F07_03235;end_range=673,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03235;partial=true PYKI01000419.1 Protein Homology CDS 417 673 . - 2 ID=cds-TGE20864.1;Parent=gene-C9F07_03235;Dbxref=NCBI_GP:TGE20864.1;Name=TGE20864.1;end_range=673,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454866.1;locus_tag=C9F07_03235;partial=true;product=ribonuclease HI;protein_id=TGE20864.1;transl_table=11 ##sequence-region PYKI01000788.1 1 671 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000788.1 Genbank region 1 671 . + . ID=PYKI01000788.1:1..671;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000788.1 Genbank gene 1 487 . + . ID=gene-C9F07_07100;Name=C9F07_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07100;partial=true;start_range=.,1 PYKI01000788.1 Protein Homology CDS 1 487 . + 1 ID=cds-TGE09158.1;Parent=gene-C9F07_07100;Dbxref=NCBI_GP:TGE09158.1;Name=TGE09158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455673.1;locus_tag=C9F07_07100;partial=true;product=flagellar basal body L-ring protein FlgH;protein_id=TGE09158.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000558.1 1 670 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000558.1 Genbank region 1 670 . + . ID=PYKI01000558.1:1..670;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000558.1 Genbank gene 66 139 . - . ID=gene-C9F07_04720;Name=C9F07_04720;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_04720 PYKI01000558.1 tRNAscan-SE tRNA 66 139 . - . ID=rna-C9F07_04720;Parent=gene-C9F07_04720;anticodon=(pos:complement(105..107));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_04720;product=tRNA-Gly PYKI01000558.1 tRNAscan-SE exon 66 139 . - . ID=exon-C9F07_04720-1;Parent=rna-C9F07_04720;anticodon=(pos:complement(105..107));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_04720;product=tRNA-Gly PYKI01000558.1 Genbank gene 219 670 . - . ID=gene-C9F07_04725;Name=C9F07_04725;end_range=670,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04725;partial=true PYKI01000558.1 Protein Homology CDS 219 670 . - 2 ID=cds-TGE14878.1;Parent=gene-C9F07_04725;Dbxref=NCBI_GP:TGE14878.1;Name=TGE14878.1;end_range=670,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457436.1;locus_tag=C9F07_04725;partial=true;product=endopeptidase;protein_id=TGE14878.1;transl_table=11 ##sequence-region PYKI01000845.1 1 639 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000845.1 Genbank region 1 639 . + . ID=PYKI01000845.1:1..639;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000845.1 Genbank gene 1 339 . - . ID=gene-C9F07_07700;Name=C9F07_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07700;partial=true;start_range=.,1 PYKI01000845.1 Protein Homology CDS 1 339 . - 0 ID=cds-TGE06978.1;Parent=gene-C9F07_07700;Dbxref=NCBI_GP:TGE06978.1;Name=TGE06978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460141.1;locus_tag=C9F07_07700;partial=true;product=hypothetical protein;protein_id=TGE06978.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002081.1 1 670 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002081.1 Genbank region 1 670 . + . ID=PYKI01002081.1:1..670;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002081.1 Genbank gene 1 670 . - . ID=gene-C9F07_20180;Name=secA;end_range=670,.;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=C9F07_20180;partial=true;start_range=.,1 PYKI01002081.1 Protein Homology CDS 1 670 . - 1 ID=cds-TGD59306.1;Parent=gene-C9F07_20180;Dbxref=NCBI_GP:TGD59306.1;Name=TGD59306.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;end_range=670,.;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454748.1;locus_tag=C9F07_20180;partial=true;product=preprotein translocase subunit SecA;protein_id=TGD59306.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001658.1 1 670 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001658.1 Genbank region 1 670 . + . ID=PYKI01001658.1:1..670;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001658.1 Genbank gene 1 182 . + . ID=gene-C9F07_15820;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=C9F07_15820;partial=true;start_range=.,1 PYKI01001658.1 Protein Homology CDS 1 182 . + 2 ID=cds-TGD70191.1;Parent=gene-C9F07_15820;Dbxref=NCBI_GP:TGD70191.1;Name=TGD70191.1;Note=part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors;gbkey=CDS;gene=cpxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457993.1;locus_tag=C9F07_15820;partial=true;product=two-component system sensor histidine kinase CpxA;protein_id=TGD70191.1;start_range=.,1;transl_table=11 PYKI01001658.1 Genbank gene 233 628 . - . ID=gene-C9F07_15825;Name=C9F07_15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15825 PYKI01001658.1 Protein Homology CDS 233 628 . - 0 ID=cds-TGD70192.1;Parent=gene-C9F07_15825;Dbxref=NCBI_GP:TGD70192.1;Name=TGD70192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457994.1;locus_tag=C9F07_15825;product=nuclear transport factor 2 family protein;protein_id=TGD70192.1;transl_table=11 ##sequence-region PYKI01000585.1 1 3323 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000585.1 Genbank region 1 3323 . + . ID=PYKI01000585.1:1..3323;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000585.1 Genbank gene 1 1155 . + . ID=gene-C9F07_04960;Name=C9F07_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04960;partial=true;start_range=.,1 PYKI01000585.1 Protein Homology CDS 1 1155 . + 0 ID=cds-TGE14305.1;Parent=gene-C9F07_04960;Dbxref=NCBI_GP:TGE14305.1;Name=TGE14305.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458241.1;locus_tag=C9F07_04960;partial=true;product=PTS mannitol transporter subunit IICBA;protein_id=TGE14305.1;start_range=.,1;transl_table=11 PYKI01000585.1 Genbank gene 1376 2524 . + . ID=gene-C9F07_04965;Name=C9F07_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04965 PYKI01000585.1 Protein Homology CDS 1376 2524 . + 0 ID=cds-TGE14306.1;Parent=gene-C9F07_04965;Dbxref=NCBI_GP:TGE14306.1;Name=TGE14306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=C9F07_04965;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=TGE14306.1;transl_table=11 PYKI01000585.1 Genbank gene 2521 3111 . + . ID=gene-C9F07_04970;Name=C9F07_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04970 PYKI01000585.1 Protein Homology CDS 2521 3111 . + 0 ID=cds-TGE14307.1;Parent=gene-C9F07_04970;Dbxref=NCBI_GP:TGE14307.1;Name=TGE14307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458239.1;locus_tag=C9F07_04970;product=MltR family transcriptional regulator;protein_id=TGE14307.1;transl_table=11 PYKI01000585.1 Genbank gene 3121 3323 . - . ID=gene-C9F07_04975;Name=C9F07_04975;end_range=3323,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04975;partial=true PYKI01000585.1 Protein Homology CDS 3121 3323 . - 2 ID=cds-TGE14308.1;Parent=gene-C9F07_04975;Dbxref=NCBI_GP:TGE14308.1;Name=TGE14308.1;end_range=3323,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=C9F07_04975;partial=true;product=hypothetical protein;protein_id=TGE14308.1;transl_table=11 ##sequence-region PYKI01003421.1 1 667 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003421.1 Genbank region 1 667 . + . ID=PYKI01003421.1:1..667;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003421.1 Genbank gene 1 171 . - . ID=gene-C9F07_34400;Name=C9F07_34400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34400;partial=true;start_range=.,1 PYKI01003421.1 Protein Homology CDS 1 171 . - 0 ID=cds-TGD33641.1;Parent=gene-C9F07_34400;Dbxref=NCBI_GP:TGD33641.1;Name=TGD33641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455907.1;locus_tag=C9F07_34400;partial=true;product=NADP-dependent oxidoreductase;protein_id=TGD33641.1;start_range=.,1;transl_table=11 PYKI01003421.1 Genbank gene 383 667 . + . ID=gene-C9F07_34405;Name=C9F07_34405;end_range=667,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34405;partial=true PYKI01003421.1 Protein Homology CDS 383 667 . + 0 ID=cds-TGD33642.1;Parent=gene-C9F07_34405;Dbxref=NCBI_GP:TGD33642.1;Name=TGD33642.1;end_range=667,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=C9F07_34405;partial=true;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=TGD33642.1;transl_table=11 ##sequence-region PYKI01002802.1 1 667 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002802.1 Genbank region 1 667 . + . ID=PYKI01002802.1:1..667;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002802.1 Genbank gene 1 667 . + . ID=gene-C9F07_28055;Name=C9F07_28055;end_range=667,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28055;partial=true;start_range=.,1 PYKI01002802.1 Protein Homology CDS 1 667 . + 1 ID=cds-TGD45842.1;Parent=gene-C9F07_28055;Dbxref=NCBI_GP:TGD45842.1;Name=TGD45842.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;end_range=667,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458869.1;locus_tag=C9F07_28055;partial=true;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=TGD45842.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001941.1 1 667 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001941.1 Genbank region 1 667 . + . ID=PYKI01001941.1:1..667;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001941.1 Genbank gene 1 667 . - . ID=gene-C9F07_18720;Name=C9F07_18720;end_range=667,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18720;partial=true;start_range=.,1 PYKI01001941.1 Protein Homology CDS 1 667 . - 2 ID=cds-TGD60661.1;Parent=gene-C9F07_18720;Dbxref=NCBI_GP:TGD60661.1;Name=TGD60661.1;end_range=667,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990584.1;locus_tag=C9F07_18720;partial=true;product=fimbrial assembly protein;protein_id=TGD60661.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003224.1 1 666 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003224.1 Genbank region 1 666 . + . ID=PYKI01003224.1:1..666;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003224.1 Genbank gene 1 185 . - . ID=gene-C9F07_32450;Name=C9F07_32450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32450;partial=true;start_range=.,1 PYKI01003224.1 Protein Homology CDS 1 185 . - 0 ID=cds-TGD36687.1;Parent=gene-C9F07_32450;Dbxref=NCBI_GP:TGD36687.1;Name=TGD36687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455249.1;locus_tag=C9F07_32450;partial=true;product=hypothetical protein;protein_id=TGD36687.1;start_range=.,1;transl_table=11 PYKI01003224.1 Genbank gene 235 666 . - . ID=gene-C9F07_32455;Name=C9F07_32455;end_range=666,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32455;partial=true PYKI01003224.1 Protein Homology CDS 235 666 . - 0 ID=cds-TGD36688.1;Parent=gene-C9F07_32455;Dbxref=NCBI_GP:TGD36688.1;Name=TGD36688.1;end_range=666,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455248.1;locus_tag=C9F07_32455;partial=true;product=hypothetical protein;protein_id=TGD36688.1;transl_table=11 ##sequence-region PYKI01000523.1 1 666 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000523.1 Genbank region 1 666 . + . ID=PYKI01000523.1:1..666;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000523.1 Genbank pseudogene 1 579 . + . ID=gene-C9F07_04335;Name=C9F07_04335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04335;pseudo=true PYKI01000523.1 Protein Homology CDS 1 579 . + 0 ID=cds-C9F07_04335;Parent=gene-C9F07_04335;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455823.1;locus_tag=C9F07_04335;product=L-Ala-D/L-Glu epimerase;pseudo=true;transl_table=11 PYKI01000523.1 Genbank pseudogene 554 664 . - . ID=gene-C9F07_04340;Name=C9F07_04340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04340;pseudo=true PYKI01000523.1 Protein Homology CDS 554 664 . - 0 ID=cds-C9F07_04340;Parent=gene-C9F07_04340;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005074683.1;locus_tag=C9F07_04340;product=murein peptide amidase;pseudo=true;transl_table=11 ##sequence-region PYKI01003560.1 1 665 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003560.1 Genbank region 1 665 . + . ID=PYKI01003560.1:1..665;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003560.1 Genbank pseudogene 41 499 . + . ID=gene-C9F07_35955;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=pseudogene;locus_tag=C9F07_35955;pseudo=true PYKI01003560.1 Protein Homology CDS 41 499 . + 0 ID=cds-C9F07_35955;Parent=gene-C9F07_35955;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=fliG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456531.1;locus_tag=C9F07_35955;product=flagellar motor switch protein FliG;pseudo=true;transl_table=11 PYKI01003560.1 Genbank gene 492 665 . + . ID=gene-C9F07_35960;Name=fliH;end_range=665,.;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=C9F07_35960;partial=true PYKI01003560.1 Protein Homology CDS 492 665 . + 0 ID=cds-TGD30574.1;Parent=gene-C9F07_35960;Dbxref=NCBI_GP:TGD30574.1;Name=TGD30574.1;Note=binds to and inhibits the function of flagella specific ATPase FliI;end_range=665,.;gbkey=CDS;gene=fliH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456532.1;locus_tag=C9F07_35960;partial=true;product=flagellar assembly protein FliH;protein_id=TGD30574.1;transl_table=11 ##sequence-region PYKI01000170.1 1 664 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000170.1 Genbank region 1 664 . + . ID=PYKI01000170.1:1..664;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000170.1 Genbank gene 1 656 . + . ID=gene-C9F07_01160;Name=C9F07_01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01160;partial=true;start_range=.,1 PYKI01000170.1 Protein Homology CDS 1 656 . + 2 ID=cds-TGE30057.1;Parent=gene-C9F07_01160;Dbxref=NCBI_GP:TGE30057.1;Name=TGE30057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=C9F07_01160;partial=true;product=NAD-dependent malic enzyme;protein_id=TGE30057.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001628.1 1 3319 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001628.1 Genbank region 1 3319 . + . ID=PYKI01001628.1:1..3319;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001628.1 Genbank pseudogene 1 937 . + . ID=gene-C9F07_15540;Name=modC;gbkey=Gene;gene=modC;gene_biotype=pseudogene;locus_tag=C9F07_15540;pseudo=true PYKI01001628.1 Protein Homology CDS 1 937 . + 1 ID=cds-C9F07_15540;Parent=gene-C9F07_15540;Note=Part of the ABC transporter complex modABC involved in molybdenum import%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=modC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=C9F07_15540;product=molybdenum ABC transporter ATP-binding protein;pseudo=true;transl_table=11 PYKI01001628.1 Genbank gene 938 1756 . - . ID=gene-C9F07_15545;Name=C9F07_15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15545 PYKI01001628.1 Protein Homology CDS 938 1756 . - 0 ID=cds-TGD70534.1;Parent=gene-C9F07_15545;Dbxref=NCBI_GP:TGD70534.1;Name=TGD70534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=C9F07_15545;product=Cof-type HAD-IIB family hydrolase;protein_id=TGD70534.1;transl_table=11 PYKI01001628.1 Genbank gene 1920 2915 . + . ID=gene-C9F07_15550;Name=C9F07_15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15550 PYKI01001628.1 Protein Homology CDS 1920 2915 . + 0 ID=cds-TGD70532.1;Parent=gene-C9F07_15550;Dbxref=NCBI_GP:TGD70532.1;Name=TGD70532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=C9F07_15550;product=6-phosphogluconolactonase;protein_id=TGD70532.1;transl_table=11 PYKI01001628.1 Genbank gene 3059 3319 . - . ID=gene-C9F07_15555;Name=C9F07_15555;end_range=3319,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15555;partial=true PYKI01001628.1 Protein Homology CDS 3059 3319 . - 0 ID=cds-TGD70533.1;Parent=gene-C9F07_15555;Dbxref=NCBI_GP:TGD70533.1;Name=TGD70533.1;end_range=3319,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455328.1;locus_tag=C9F07_15555;partial=true;product=acyl-CoA thioesterase;protein_id=TGD70533.1;transl_table=11 ##sequence-region PYKI01003398.1 1 664 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003398.1 Genbank region 1 664 . + . ID=PYKI01003398.1:1..664;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003398.1 Genbank gene 1 212 . + . ID=gene-C9F07_34165;Name=C9F07_34165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34165;partial=true;start_range=.,1 PYKI01003398.1 Protein Homology CDS 1 212 . + 2 ID=cds-TGD34008.1;Parent=gene-C9F07_34165;Dbxref=NCBI_GP:TGD34008.1;Name=TGD34008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457651.1;locus_tag=C9F07_34165;partial=true;product=osmotically-inducible protein OsmY;protein_id=TGD34008.1;start_range=.,1;transl_table=11 PYKI01003398.1 Genbank gene 279 664 . - . ID=gene-C9F07_34170;Name=C9F07_34170;end_range=664,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34170;partial=true PYKI01003398.1 Protein Homology CDS 279 664 . - 2 ID=cds-TGD34009.1;Parent=gene-C9F07_34170;Dbxref=NCBI_GP:TGD34009.1;Name=TGD34009.1;end_range=664,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462181.1;locus_tag=C9F07_34170;partial=true;product=hypothetical protein;protein_id=TGD34009.1;transl_table=11 ##sequence-region PYKI01002997.1 1 662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002997.1 Genbank region 1 662 . + . ID=PYKI01002997.1:1..662;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002997.1 Genbank gene 1 549 . - . ID=gene-C9F07_30070;Name=C9F07_30070;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F07_30070;partial=true;start_range=.,1 PYKI01002997.1 Genbank rRNA 1 549 . - . ID=rna-C9F07_30070;Parent=gene-C9F07_30070;gbkey=rRNA;locus_tag=C9F07_30070;partial=true;product=23S ribosomal RNA;start_range=.,1 PYKI01002997.1 Genbank exon 1 549 . - . ID=exon-C9F07_30070-1;Parent=rna-C9F07_30070;gbkey=rRNA;locus_tag=C9F07_30070;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region PYKI01000688.1 1 662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000688.1 Genbank region 1 662 . + . ID=PYKI01000688.1:1..662;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000688.1 Genbank gene 36 662 . + . ID=gene-C9F07_06005;Name=gcvT;end_range=662,.;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=C9F07_06005;partial=true PYKI01000688.1 Protein Homology CDS 36 662 . + 0 ID=cds-TGE11415.1;Parent=gene-C9F07_06005;Dbxref=NCBI_GP:TGE11415.1;Name=TGE11415.1;end_range=662,.;gbkey=CDS;gene=gcvT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457453.1;locus_tag=C9F07_06005;partial=true;product=glycine cleavage system protein T;protein_id=TGE11415.1;transl_table=11 ##sequence-region PYKI01002886.1 1 662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002886.1 Genbank region 1 662 . + . ID=PYKI01002886.1:1..662;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002886.1 Genbank gene 1 239 . - . ID=gene-C9F07_28890;Name=C9F07_28890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28890;partial=true;start_range=.,1 PYKI01002886.1 Protein Homology CDS 1 239 . - 0 ID=cds-TGD44044.1;Parent=gene-C9F07_28890;Dbxref=NCBI_GP:TGD44044.1;Name=TGD44044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=C9F07_28890;partial=true;product=DUF1198 domain-containing protein;protein_id=TGD44044.1;start_range=.,1;transl_table=11 PYKI01002886.1 Genbank pseudogene 432 602 . - . ID=gene-C9F07_28895;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=pseudogene;locus_tag=C9F07_28895;pseudo=true PYKI01002886.1 Protein Homology CDS 432 602 . - 0 ID=cds-C9F07_28895;Parent=gene-C9F07_28895;Note=cytoplasmic membrane protein that functions as a monomer%3B catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=uhpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458150.1;locus_tag=C9F07_28895;product=hexose phosphate transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01001844.1 1 661 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001844.1 Genbank region 1 661 . + . ID=PYKI01001844.1:1..661;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001844.1 Genbank gene 1 249 . + . ID=gene-C9F07_17725;Name=C9F07_17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17725;partial=true;start_range=.,1 PYKI01001844.1 Protein Homology CDS 1 249 . + 0 ID=cds-TGD63780.1;Parent=gene-C9F07_17725;Dbxref=NCBI_GP:TGD63780.1;Name=TGD63780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=C9F07_17725;partial=true;product=hypothetical protein;protein_id=TGD63780.1;start_range=.,1;transl_table=11 PYKI01001844.1 Genbank pseudogene 324 623 . - . ID=gene-C9F07_17730;Name=C9F07_17730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17730;pseudo=true PYKI01001844.1 Protein Homology CDS 324 623 . - 0 ID=cds-C9F07_17730;Parent=gene-C9F07_17730;Note=peptidase E%3B catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue%3B belongs to peptidase S51 family%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463055.1;locus_tag=C9F07_17730;product=dipeptidase PepE;pseudo=true;transl_table=11 ##sequence-region PYKI01003116.1 1 661 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003116.1 Genbank region 1 661 . + . ID=PYKI01003116.1:1..661;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003116.1 Genbank gene 1 561 . + . ID=gene-C9F07_31160;Name=C9F07_31160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31160;partial=true;start_range=.,1 PYKI01003116.1 Protein Homology CDS 1 561 . + 0 ID=cds-TGD39382.1;Parent=gene-C9F07_31160;Dbxref=NCBI_GP:TGD39382.1;Name=TGD39382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456206.1;locus_tag=C9F07_31160;partial=true;product=hypothetical protein;protein_id=TGD39382.1;start_range=.,1;transl_table=11 PYKI01003116.1 Genbank gene 554 661 . + . ID=gene-C9F07_31165;Name=C9F07_31165;end_range=661,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31165;partial=true PYKI01003116.1 Protein Homology CDS 554 661 . + 0 ID=cds-TGD39383.1;Parent=gene-C9F07_31165;Dbxref=NCBI_GP:TGD39383.1;Name=TGD39383.1;Note=catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism;end_range=661,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456205.1;locus_tag=C9F07_31165;partial=true;product=succinylglutamate desuccinylase;protein_id=TGD39383.1;transl_table=11 ##sequence-region PYKI01000509.1 1 660 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000509.1 Genbank region 1 660 . + . ID=PYKI01000509.1:1..660;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000509.1 Genbank gene 1 660 . - . ID=gene-C9F07_04205;Name=C9F07_04205;end_range=660,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04205;partial=true;start_range=.,1 PYKI01000509.1 Protein Homology CDS 1 660 . - 0 ID=cds-TGE16939.1;Parent=gene-C9F07_04205;Dbxref=NCBI_GP:TGE16939.1;Name=TGE16939.1;end_range=660,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000252893.1;locus_tag=C9F07_04205;partial=true;product=hypothetical protein;protein_id=TGE16939.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001826.1 1 660 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001826.1 Genbank region 1 660 . + . ID=PYKI01001826.1:1..660;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001826.1 Genbank gene 1 118 . + . ID=gene-C9F07_17565;Name=C9F07_17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17565;partial=true;start_range=.,1 PYKI01001826.1 Protein Homology CDS 1 118 . + 1 ID=cds-TGD64366.1;Parent=gene-C9F07_17565;Dbxref=NCBI_GP:TGD64366.1;Name=TGD64366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454961.1;locus_tag=C9F07_17565;partial=true;product=hypothetical protein;protein_id=TGD64366.1;start_range=.,1;transl_table=11 PYKI01001826.1 Genbank gene 254 660 . - . ID=gene-C9F07_17570;Name=C9F07_17570;end_range=660,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17570;partial=true PYKI01001826.1 Protein Homology CDS 254 660 . - 2 ID=cds-TGD64367.1;Parent=gene-C9F07_17570;Dbxref=NCBI_GP:TGD64367.1;Name=TGD64367.1;Note=sigma-54 dependent activator family protein%3B activates the prpBCDE operon;end_range=660,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454962.1;locus_tag=C9F07_17570;partial=true;product=propionate catabolism operon regulatory protein PrpR;protein_id=TGD64367.1;transl_table=11 ##sequence-region PYKI01001811.1 1 660 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001811.1 Genbank region 1 660 . + . ID=PYKI01001811.1:1..660;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001811.1 Genbank pseudogene 45 272 . + . ID=gene-C9F07_17425;Name=C9F07_17425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17425;pseudo=true PYKI01001811.1 Protein Homology CDS 45 272 . + 0 ID=cds-C9F07_17425;Parent=gene-C9F07_17425;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456289.1;locus_tag=C9F07_17425;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;pseudo=true;transl_table=11 ##sequence-region PYKI01001507.1 1 3319 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001507.1 Genbank region 1 3319 . + . ID=PYKI01001507.1:1..3319;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001507.1 Genbank gene 1 337 . + . ID=gene-C9F07_14355;Name=C9F07_14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14355;partial=true;start_range=.,1 PYKI01001507.1 Protein Homology CDS 1 337 . + 1 ID=cds-TGD77707.1;Parent=gene-C9F07_14355;Dbxref=NCBI_GP:TGD77707.1;Name=TGD77707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=C9F07_14355;partial=true;product=DNA-cytosine methyltransferase;protein_id=TGD77707.1;start_range=.,1;transl_table=11 PYKI01001507.1 Genbank pseudogene 318 746 . + . ID=gene-C9F07_14360;Name=C9F07_14360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14360;pseudo=true PYKI01001507.1 Protein Homology CDS 318 746 . + 0 ID=cds-C9F07_14360;Parent=gene-C9F07_14360;Note=DNA mismatch endonuclease%3B recognizes and repairs T:G mismatches%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=C9F07_14360;product=very short patch repair endonuclease;pseudo=true;transl_table=11 PYKI01001507.1 Genbank gene 777 1697 . - . ID=gene-C9F07_14365;Name=C9F07_14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14365 PYKI01001507.1 Protein Homology CDS 777 1697 . - 0 ID=cds-TGD77708.1;Parent=gene-C9F07_14365;Dbxref=NCBI_GP:TGD77708.1;Name=TGD77708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=C9F07_14365;product=drug/metabolite exporter YedA;protein_id=TGD77708.1;transl_table=11 PYKI01001507.1 Genbank gene 1867 2784 . + . ID=gene-C9F07_14370;Name=C9F07_14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14370 PYKI01001507.1 Protein Homology CDS 1867 2784 . + 0 ID=cds-TGD77709.1;Parent=gene-C9F07_14370;Dbxref=NCBI_GP:TGD77709.1;Name=TGD77709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=C9F07_14370;product=hypothetical protein;protein_id=TGD77709.1;transl_table=11 PYKI01001507.1 Genbank gene 2801 3046 . + . ID=gene-C9F07_14375;Name=C9F07_14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14375 PYKI01001507.1 Protein Homology CDS 2801 3046 . + 0 ID=cds-TGD77710.1;Parent=gene-C9F07_14375;Dbxref=NCBI_GP:TGD77710.1;Name=TGD77710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456548.1;locus_tag=C9F07_14375;product=DUF2158 domain-containing protein;protein_id=TGD77710.1;transl_table=11 ##sequence-region PYKI01001804.1 1 660 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001804.1 Genbank region 1 660 . + . ID=PYKI01001804.1:1..660;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001804.1 Genbank gene 1 618 . - . ID=gene-C9F07_17380;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=C9F07_17380;partial=true;start_range=.,1 PYKI01001804.1 Protein Homology CDS 1 618 . - 0 ID=cds-TGD65789.1;Parent=gene-C9F07_17380;Dbxref=NCBI_GP:TGD65789.1;Name=TGD65789.1;Note=part of the PotFGHI ATP-dependent putrescine transporter;gbkey=CDS;gene=potG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459855.1;locus_tag=C9F07_17380;partial=true;product=polyamine ABC transporter ATP-binding protein;protein_id=TGD65789.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000404.1 1 659 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000404.1 Genbank region 1 659 . + . ID=PYKI01000404.1:1..659;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000404.1 Genbank gene 1 90 . + . ID=gene-C9F07_03090;Name=C9F07_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03090;partial=true;start_range=.,1 PYKI01000404.1 Protein Homology CDS 1 90 . + 0 ID=cds-TGE21191.1;Parent=gene-C9F07_03090;Dbxref=NCBI_GP:TGE21191.1;Name=TGE21191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000620665.1;locus_tag=C9F07_03090;partial=true;product=Cro/Cl family transcriptional regulator;protein_id=TGE21191.1;start_range=.,1;transl_table=11 PYKI01000404.1 Genbank gene 199 477 . + . ID=gene-C9F07_03095;Name=C9F07_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03095 PYKI01000404.1 Protein Homology CDS 199 477 . + 0 ID=cds-TGE21192.1;Parent=gene-C9F07_03095;Dbxref=NCBI_GP:TGE21192.1;Name=TGE21192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001177654.1;locus_tag=C9F07_03095;product=hypothetical protein;protein_id=TGE21192.1;transl_table=11 ##sequence-region PYKI01000606.1 1 658 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000606.1 Genbank region 1 658 . + . ID=PYKI01000606.1:1..658;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000606.1 Genbank gene 1 247 . - . ID=gene-C9F07_05175;Name=C9F07_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05175;partial=true;start_range=.,1 PYKI01000606.1 Protein Homology CDS 1 247 . - 0 ID=cds-TGE13964.1;Parent=gene-C9F07_05175;Dbxref=NCBI_GP:TGE13964.1;Name=TGE13964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933952.1;locus_tag=C9F07_05175;partial=true;product=hypothetical protein;protein_id=TGE13964.1;start_range=.,1;transl_table=11 PYKI01000606.1 Genbank gene 241 658 . - . ID=gene-C9F07_05180;Name=C9F07_05180;end_range=658,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05180;partial=true PYKI01000606.1 Protein Homology CDS 241 658 . - 1 ID=cds-TGE13965.1;Parent=gene-C9F07_05180;Dbxref=NCBI_GP:TGE13965.1;Name=TGE13965.1;end_range=658,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000252893.1;locus_tag=C9F07_05180;partial=true;product=hypothetical protein;protein_id=TGE13965.1;transl_table=11 ##sequence-region PYKI01001939.1 1 657 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001939.1 Genbank region 1 657 . + . ID=PYKI01001939.1:1..657;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001939.1 Genbank gene 54 657 . + . ID=gene-C9F07_18700;Name=C9F07_18700;end_range=657,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18700;partial=true PYKI01001939.1 Protein Homology CDS 54 657 . + 0 ID=cds-TGD60687.1;Parent=gene-C9F07_18700;Dbxref=NCBI_GP:TGD60687.1;Name=TGD60687.1;end_range=657,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=C9F07_18700;partial=true;product=PTS sugar transporter subunit IIC;protein_id=TGD60687.1;transl_table=11 ##sequence-region PYKI01002537.1 1 657 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002537.1 Genbank region 1 657 . + . ID=PYKI01002537.1:1..657;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002537.1 Genbank gene 5 657 . + . ID=gene-C9F07_25175;Name=C9F07_25175;end_range=657,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25175;partial=true PYKI01002537.1 Protein Homology CDS 5 657 . + 0 ID=cds-TGD50001.1;Parent=gene-C9F07_25175;Dbxref=NCBI_GP:TGD50001.1;Name=TGD50001.1;Note=with EutC catalyzes the formation of acetaldehyde and ammonia from ethanolamine;end_range=657,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456993.1;locus_tag=C9F07_25175;partial=true;product=ethanolamine ammonia lyase large subunit;protein_id=TGD50001.1;transl_table=11 ##sequence-region PYKI01002223.1 1 657 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002223.1 Genbank region 1 657 . + . ID=PYKI01002223.1:1..657;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002223.1 Genbank pseudogene 1 188 . + . ID=gene-C9F07_21670;Name=C9F07_21670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21670;pseudo=true PYKI01002223.1 Protein Homology CDS 1 188 . + 2 ID=cds-C9F07_21670;Parent=gene-C9F07_21670;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455163.1;locus_tag=C9F07_21670;product=enterochelin esterase;pseudo=true;transl_table=11 PYKI01002223.1 Genbank gene 219 437 . + . ID=gene-C9F07_21675;Name=C9F07_21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21675 PYKI01002223.1 Protein Homology CDS 219 437 . + 0 ID=cds-TGD56460.1;Parent=gene-C9F07_21675;Dbxref=NCBI_GP:TGD56460.1;Name=TGD56460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=C9F07_21675;product=MbtH family protein;protein_id=TGD56460.1;transl_table=11 PYKI01002223.1 Genbank gene 434 657 . + . ID=gene-C9F07_21680;Name=C9F07_21680;end_range=657,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21680;partial=true PYKI01002223.1 GeneMarkS+ CDS 434 657 . + 0 ID=cds-TGD56461.1;Parent=gene-C9F07_21680;Dbxref=NCBI_GP:TGD56461.1;Name=TGD56461.1;end_range=657,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F07_21680;partial=true;product=hypothetical protein;protein_id=TGD56461.1;transl_table=11 ##sequence-region PYKI01000671.1 1 656 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000671.1 Genbank region 1 656 . + . ID=PYKI01000671.1:1..656;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000671.1 Genbank pseudogene 70 252 . + . ID=gene-C9F07_05845;Name=C9F07_05845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05845;pseudo=true PYKI01000671.1 Protein Homology CDS 70 252 . + 0 ID=cds-C9F07_05845;Parent=gene-C9F07_05845;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456809.1;locus_tag=C9F07_05845;product=DNA oxidative demethylase AlkB;pseudo=true;transl_table=11 PYKI01000671.1 Genbank pseudogene 328 591 . + . ID=gene-C9F07_05850;Name=C9F07_05850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05850;pseudo=true PYKI01000671.1 Protein Homology CDS 328 591 . + 0 ID=cds-C9F07_05850;Parent=gene-C9F07_05850;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=C9F07_05850;product=multidrug ABC transporter permease/ATP-binding protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000447.1 1 656 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000447.1 Genbank region 1 656 . + . ID=PYKI01000447.1:1..656;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000447.1 Genbank gene 1 656 . - . ID=gene-C9F07_03455;Name=C9F07_03455;end_range=656,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03455;partial=true;start_range=.,1 PYKI01000447.1 Protein Homology CDS 1 656 . - 0 ID=cds-TGE19985.1;Parent=gene-C9F07_03455;Dbxref=NCBI_GP:TGE19985.1;Name=TGE19985.1;Note=efflux pump for the antibacterial peptide microcin J25;end_range=656,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456808.1;locus_tag=C9F07_03455;partial=true;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=TGE19985.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000757.1 1 656 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000757.1 Genbank region 1 656 . + . ID=PYKI01000757.1:1..656;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000757.1 Genbank pseudogene 1 519 . + . ID=gene-C9F07_06680;Name=C9F07_06680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06680;pseudo=true PYKI01000757.1 Protein Homology CDS 1 519 . + 0 ID=cds-C9F07_06680;Parent=gene-C9F07_06680;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456073.1;locus_tag=C9F07_06680;product=electron transport complex subunit RsxC;pseudo=true;transl_table=11 PYKI01000757.1 Genbank pseudogene 510 656 . + . ID=gene-C9F07_06685;Name=C9F07_06685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06685;pseudo=true PYKI01000757.1 Protein Homology CDS 510 656 . + 0 ID=cds-C9F07_06685;Parent=gene-C9F07_06685;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455317.1;locus_tag=C9F07_06685;product=galactose-1-phosphate uridylyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01002444.1 1 3314 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002444.1 Genbank region 1 3314 . + . ID=PYKI01002444.1:1..3314;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002444.1 Genbank gene 83 511 . + . ID=gene-C9F07_24160;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=C9F07_24160 PYKI01002444.1 Protein Homology CDS 83 511 . + 0 ID=cds-TGD50991.1;Parent=gene-C9F07_24160;Dbxref=NCBI_GP:TGD50991.1;Name=TGD50991.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=C9F07_24160;product=protein TolR;protein_id=TGD50991.1;transl_table=11 PYKI01002444.1 Genbank gene 576 1439 . + . ID=gene-C9F07_24165;Name=C9F07_24165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24165 PYKI01002444.1 Protein Homology CDS 576 1439 . + 0 ID=cds-TGD50992.1;Parent=gene-C9F07_24165;Dbxref=NCBI_GP:TGD50992.1;Name=TGD50992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=C9F07_24165;product=cell envelope integrity protein TolA;protein_id=TGD50992.1;transl_table=11 PYKI01002444.1 Genbank gene 1563 2855 . + . ID=gene-C9F07_24170;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=C9F07_24170 PYKI01002444.1 Protein Homology CDS 1563 2855 . + 0 ID=cds-TGD50993.1;Parent=gene-C9F07_24170;Dbxref=NCBI_GP:TGD50993.1;Name=TGD50993.1;gbkey=CDS;gene=tolB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=C9F07_24170;product=protein TolB;protein_id=TGD50993.1;transl_table=11 PYKI01002444.1 Genbank gene 2920 3314 . + . ID=gene-C9F07_24175;Name=C9F07_24175;end_range=3314,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24175;partial=true PYKI01002444.1 Protein Homology CDS 2920 3314 . + 0 ID=cds-TGD50994.1;Parent=gene-C9F07_24175;Dbxref=NCBI_GP:TGD50994.1;Name=TGD50994.1;end_range=3314,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455305.1;locus_tag=C9F07_24175;partial=true;product=peptidoglycan-associated outer membrane lipoprotein;protein_id=TGD50994.1;transl_table=11 ##sequence-region PYKI01002789.1 1 655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002789.1 Genbank region 1 655 . + . ID=PYKI01002789.1:1..655;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002789.1 Genbank gene 1 273 . - . ID=gene-C9F07_27875;Name=C9F07_27875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27875;partial=true;start_range=.,1 PYKI01002789.1 Protein Homology CDS 1 273 . - 0 ID=cds-TGD46086.1;Parent=gene-C9F07_27875;Dbxref=NCBI_GP:TGD46086.1;Name=TGD46086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457926.1;locus_tag=C9F07_27875;partial=true;product=type I pantothenate kinase;protein_id=TGD46086.1;start_range=.,1;transl_table=11 PYKI01002789.1 Genbank pseudogene 256 462 . + . ID=gene-C9F07_27880;Name=C9F07_27880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27880;pseudo=true PYKI01002789.1 Protein Homology CDS 256 462 . + 0 ID=cds-C9F07_27880;Parent=gene-C9F07_27880;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001353728.1;locus_tag=C9F07_27880;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002789.1 Genbank gene 482 655 . - . ID=gene-C9F07_27885;Name=C9F07_27885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27885 PYKI01002789.1 Protein Homology CDS 482 655 . - 0 ID=cds-TGD46087.1;Parent=gene-C9F07_27885;Dbxref=NCBI_GP:TGD46087.1;Name=TGD46087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=C9F07_27885;product=hypothetical protein;protein_id=TGD46087.1;transl_table=11 ##sequence-region PYKI01003578.1 1 655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003578.1 Genbank region 1 655 . + . ID=PYKI01003578.1:1..655;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003578.1 Genbank gene 1 186 . - . ID=gene-C9F07_36115;Name=C9F07_36115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36115;partial=true;start_range=.,1 PYKI01003578.1 Protein Homology CDS 1 186 . - 0 ID=cds-TGD30141.1;Parent=gene-C9F07_36115;Dbxref=NCBI_GP:TGD30141.1;Name=TGD30141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456715.1;locus_tag=C9F07_36115;partial=true;product=hypothetical protein;protein_id=TGD30141.1;start_range=.,1;transl_table=11 PYKI01003578.1 Genbank gene 428 655 . - . ID=gene-C9F07_36120;Name=metG;end_range=655,.;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=C9F07_36120;partial=true PYKI01003578.1 Protein Homology CDS 428 655 . - 0 ID=cds-TGD30142.1;Parent=gene-C9F07_36120;Dbxref=NCBI_GP:TGD30142.1;Name=TGD30142.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;end_range=655,.;gbkey=CDS;gene=metG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456714.1;locus_tag=C9F07_36120;partial=true;product=methionine--tRNA ligase;protein_id=TGD30142.1;transl_table=11 ##sequence-region PYKI01000677.1 1 655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000677.1 Genbank region 1 655 . + . ID=PYKI01000677.1:1..655;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000677.1 Genbank gene 1 427 . + . ID=gene-C9F07_05885;Name=C9F07_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05885;partial=true;start_range=.,1 PYKI01000677.1 Protein Homology CDS 1 427 . + 1 ID=cds-TGE11597.1;Parent=gene-C9F07_05885;Dbxref=NCBI_GP:TGE11597.1;Name=TGE11597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=C9F07_05885;partial=true;product=esterase;protein_id=TGE11597.1;start_range=.,1;transl_table=11 PYKI01000677.1 Genbank gene 424 655 . - . ID=gene-C9F07_05890;Name=C9F07_05890;end_range=655,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05890;partial=true PYKI01000677.1 Protein Homology CDS 424 655 . - 1 ID=cds-TGE11598.1;Parent=gene-C9F07_05890;Dbxref=NCBI_GP:TGE11598.1;Name=TGE11598.1;Note=negative regulator of ulaG and ulaABCDEF;end_range=655,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458815.1;locus_tag=C9F07_05890;partial=true;product=HTH-type transcriptional regulator UlaR;protein_id=TGE11598.1;transl_table=11 ##sequence-region PYKI01001369.1 1 655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001369.1 Genbank region 1 655 . + . ID=PYKI01001369.1:1..655;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001369.1 Genbank gene 1 223 . - . ID=gene-C9F07_12870;Name=C9F07_12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12870;partial=true;start_range=.,1 PYKI01001369.1 Protein Homology CDS 1 223 . - 0 ID=cds-TGD84767.1;Parent=gene-C9F07_12870;Dbxref=NCBI_GP:TGD84767.1;Name=TGD84767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455273.1;locus_tag=C9F07_12870;partial=true;product=LamB/YcsF family protein;protein_id=TGD84767.1;start_range=.,1;transl_table=11 PYKI01001369.1 Genbank gene 213 655 . - . ID=gene-C9F07_12875;Name=C9F07_12875;end_range=655,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12875;partial=true PYKI01001369.1 Protein Homology CDS 213 655 . - 2 ID=cds-TGD84768.1;Parent=gene-C9F07_12875;Dbxref=NCBI_GP:TGD84768.1;Name=TGD84768.1;end_range=655,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=C9F07_12875;partial=true;product=hypothetical protein;protein_id=TGD84768.1;transl_table=11 ##sequence-region PYKI01002939.1 1 654 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002939.1 Genbank region 1 654 . + . ID=PYKI01002939.1:1..654;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002939.1 Genbank gene 16 654 . + . ID=gene-C9F07_29460;Name=cbiD;end_range=654,.;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=C9F07_29460;partial=true PYKI01002939.1 Protein Homology CDS 16 654 . + 0 ID=cds-TGD42547.1;Parent=gene-C9F07_29460;Dbxref=NCBI_GP:TGD42547.1;Name=TGD42547.1;Note=Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A;end_range=654,.;gbkey=CDS;gene=cbiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=C9F07_29460;partial=true;product=cobalt-precorrin-5B (C(1))-methyltransferase;protein_id=TGD42547.1;transl_table=11 ##sequence-region PYKI01002303.1 1 654 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002303.1 Genbank region 1 654 . + . ID=PYKI01002303.1:1..654;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002303.1 Genbank gene 1 173 . + . ID=gene-C9F07_22585;Name=C9F07_22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22585;partial=true;start_range=.,1 PYKI01002303.1 Protein Homology CDS 1 173 . + 2 ID=cds-TGD54387.1;Parent=gene-C9F07_22585;Dbxref=NCBI_GP:TGD54387.1;Name=TGD54387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457706.1;locus_tag=C9F07_22585;partial=true;product=isoprenoid biosynthesis protein ElbB;protein_id=TGD54387.1;start_range=.,1;transl_table=11 PYKI01002303.1 Genbank gene 170 654 . + . ID=gene-C9F07_22590;Name=mtgA;end_range=654,.;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=C9F07_22590;partial=true PYKI01002303.1 Protein Homology CDS 170 654 . + 0 ID=cds-TGD54388.1;Parent=gene-C9F07_22590;Dbxref=NCBI_GP:TGD54388.1;Name=TGD54388.1;Note=glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan;end_range=654,.;gbkey=CDS;gene=mtgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457705.1;locus_tag=C9F07_22590;partial=true;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=TGD54388.1;transl_table=11 ##sequence-region PYKI01002458.1 1 654 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002458.1 Genbank region 1 654 . + . ID=PYKI01002458.1:1..654;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002458.1 Genbank gene 1 654 . + . ID=gene-C9F07_24290;Name=asnA;end_range=654,.;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=C9F07_24290;partial=true;start_range=.,1 PYKI01002458.1 Protein Homology CDS 1 654 . + 1 ID=cds-TGD50793.1;Parent=gene-C9F07_24290;Dbxref=NCBI_GP:TGD50793.1;Name=TGD50793.1;end_range=654,.;gbkey=CDS;gene=asnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=C9F07_24290;partial=true;product=aspartate--ammonia ligase;protein_id=TGD50793.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003254.1 1 653 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003254.1 Genbank region 1 653 . + . ID=PYKI01003254.1:1..653;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003254.1 Genbank gene 1 653 . + . ID=gene-C9F07_32740;Name=C9F07_32740;end_range=653,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32740;partial=true;start_range=.,1 PYKI01003254.1 Protein Homology CDS 1 653 . + 2 ID=cds-TGD36310.1;Parent=gene-C9F07_32740;Dbxref=NCBI_GP:TGD36310.1;Name=TGD36310.1;end_range=653,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456665.1;locus_tag=C9F07_32740;partial=true;product=capsular polysaccharide biosynthesis protein;protein_id=TGD36310.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003399.1 1 652 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003399.1 Genbank region 1 652 . + . ID=PYKI01003399.1:1..652;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003399.1 Genbank gene 268 652 . + . ID=gene-C9F07_34175;Name=C9F07_34175;end_range=652,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34175;partial=true PYKI01003399.1 Protein Homology CDS 268 652 . + 0 ID=cds-TGD33928.1;Parent=gene-C9F07_34175;Dbxref=NCBI_GP:TGD33928.1;Name=TGD33928.1;Note=catalyzes the reduction of nitroaromatic compounds such as nitrofurazone%2C quinones and the anti-tumor agent CB1954%3B NAD(P)H-dependent%3B oxygen insensitive;end_range=652,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455155.1;locus_tag=C9F07_34175;partial=true;product=NAD(P)H nitroreductase;protein_id=TGD33928.1;transl_table=11 ##sequence-region PYKI01001249.1 1 652 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001249.1 Genbank region 1 652 . + . ID=PYKI01001249.1:1..652;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001249.1 Genbank gene 1 652 . + . ID=gene-C9F07_11640;Name=C9F07_11640;end_range=652,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11640;partial=true;start_range=.,1 PYKI01001249.1 Protein Homology CDS 1 652 . + 1 ID=cds-TGD90130.1;Parent=gene-C9F07_11640;Dbxref=NCBI_GP:TGD90130.1;Name=TGD90130.1;end_range=652,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456923.1;locus_tag=C9F07_11640;partial=true;product=hypothetical protein;protein_id=TGD90130.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002760.1 1 3313 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002760.1 Genbank region 1 3313 . + . ID=PYKI01002760.1:1..3313;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002760.1 Genbank gene 1 276 . + . ID=gene-C9F07_27540;Name=C9F07_27540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27540;partial=true;start_range=.,1 PYKI01002760.1 Protein Homology CDS 1 276 . + 0 ID=cds-TGD46661.1;Parent=gene-C9F07_27540;Dbxref=NCBI_GP:TGD46661.1;Name=TGD46661.1;Note=Required for efficient pilin antigenic variation;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459387.1;locus_tag=C9F07_27540;partial=true;product=recombination-associated protein RdgC;protein_id=TGD46661.1;start_range=.,1;transl_table=11 PYKI01002760.1 Genbank gene 314 598 . - . ID=gene-C9F07_27545;Name=C9F07_27545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27545 PYKI01002760.1 Protein Homology CDS 314 598 . - 0 ID=cds-TGD46662.1;Parent=gene-C9F07_27545;Dbxref=NCBI_GP:TGD46662.1;Name=TGD46662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454986.1;locus_tag=C9F07_27545;product=pyrimidine/purine nucleoside phosphorylase;protein_id=TGD46662.1;transl_table=11 PYKI01002760.1 Genbank gene 669 1346 . - . ID=gene-C9F07_27550;Name=C9F07_27550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27550 PYKI01002760.1 Protein Homology CDS 669 1346 . - 0 ID=cds-TGD46663.1;Parent=gene-C9F07_27550;Dbxref=NCBI_GP:TGD46663.1;Name=TGD46663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=C9F07_27550;product=AroM protein;protein_id=TGD46663.1;transl_table=11 PYKI01002760.1 Genbank gene 1597 1788 . - . ID=gene-C9F07_27555;Name=C9F07_27555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27555 PYKI01002760.1 Protein Homology CDS 1597 1788 . - 0 ID=cds-TGD46664.1;Parent=gene-C9F07_27555;Dbxref=NCBI_GP:TGD46664.1;Name=TGD46664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454984.1;locus_tag=C9F07_27555;product=hypothetical protein;protein_id=TGD46664.1;transl_table=11 PYKI01002760.1 Genbank gene 1815 2360 . - . ID=gene-C9F07_27560;Name=C9F07_27560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27560 PYKI01002760.1 Protein Homology CDS 1815 2360 . - 0 ID=cds-TGD46665.1;Parent=gene-C9F07_27560;Dbxref=NCBI_GP:TGD46665.1;Name=TGD46665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454983.1;locus_tag=C9F07_27560;product=shikimate kinase;protein_id=TGD46665.1;transl_table=11 PYKI01002760.1 Genbank gene 2545 3000 . - . ID=gene-C9F07_27565;Name=C9F07_27565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27565 PYKI01002760.1 Protein Homology CDS 2545 3000 . - 0 ID=cds-TGD46666.1;Parent=gene-C9F07_27565;Dbxref=NCBI_GP:TGD46666.1;Name=TGD46666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454982.1;locus_tag=C9F07_27565;product=YaiI/YqxD family protein;protein_id=TGD46666.1;transl_table=11 PYKI01002760.1 Genbank pseudogene 3140 3259 . + . ID=gene-C9F07_27570;Name=C9F07_27570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27570;pseudo=true PYKI01002760.1 Protein Homology CDS 3140 3259 . + 0 ID=cds-C9F07_27570;Parent=gene-C9F07_27570;Note=catalyzes the formation of L-proline from pyrroline-5-carboxylate%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308463.1;locus_tag=C9F07_27570;product=pyrroline-5-carboxylate reductase;pseudo=true;transl_table=11 ##sequence-region PYKI01002217.1 1 651 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002217.1 Genbank region 1 651 . + . ID=PYKI01002217.1:1..651;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002217.1 Genbank gene 1 176 . + . ID=gene-C9F07_21615;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=C9F07_21615;partial=true;start_range=.,1 PYKI01002217.1 Protein Homology CDS 1 176 . + 2 ID=cds-TGD56474.1;Parent=gene-C9F07_21615;Dbxref=NCBI_GP:TGD56474.1;Name=TGD56474.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457601.1;locus_tag=C9F07_21615;partial=true;product=DNA primase;protein_id=TGD56474.1;start_range=.,1;transl_table=11 PYKI01002217.1 Genbank gene 191 651 . + . ID=gene-C9F07_21620;Name=C9F07_21620;end_range=651,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21620;partial=true PYKI01002217.1 Protein Homology CDS 191 651 . + 0 ID=cds-TGD56475.1;Parent=gene-C9F07_21620;Dbxref=NCBI_GP:TGD56475.1;Name=TGD56475.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;end_range=651,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462126.3;locus_tag=C9F07_21620;partial=true;product=RNA polymerase sigma factor RpoD;protein_id=TGD56475.1;transl_table=11 ##sequence-region PYKI01002116.1 1 651 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002116.1 Genbank region 1 651 . + . ID=PYKI01002116.1:1..651;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002116.1 Genbank pseudogene 40 651 . - . ID=gene-C9F07_20500;Name=C9F07_20500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20500;pseudo=true PYKI01002116.1 Protein Homology CDS 40 651 . - 0 ID=cds-C9F07_20500;Parent=gene-C9F07_20500;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=C9F07_20500;product=NADPH-dependent assimilatory sulfite reductase hemoprotein subunit;pseudo=true;transl_table=11 ##sequence-region PYKI01003440.1 1 651 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003440.1 Genbank region 1 651 . + . ID=PYKI01003440.1:1..651;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003440.1 Genbank gene 1 369 . - . ID=gene-C9F07_34590;Name=C9F07_34590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34590;partial=true;start_range=.,1 PYKI01003440.1 Protein Homology CDS 1 369 . - 0 ID=cds-TGD33438.1;Parent=gene-C9F07_34590;Dbxref=NCBI_GP:TGD33438.1;Name=TGD33438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455368.1;locus_tag=C9F07_34590;partial=true;product=hypothetical protein;protein_id=TGD33438.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000552.1 1 651 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000552.1 Genbank region 1 651 . + . ID=PYKI01000552.1:1..651;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000552.1 Genbank gene 1 651 . + . ID=gene-C9F07_04625;Name=C9F07_04625;end_range=651,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04625;partial=true;start_range=.,1 PYKI01000552.1 Protein Homology CDS 1 651 . + 1 ID=cds-TGE15130.1;Parent=gene-C9F07_04625;Dbxref=NCBI_GP:TGE15130.1;Name=TGE15130.1;end_range=651,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456802.1;locus_tag=C9F07_04625;partial=true;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=TGE15130.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003054.1 1 650 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003054.1 Genbank region 1 650 . + . ID=PYKI01003054.1:1..650;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003054.1 Genbank gene 310 650 . - . ID=gene-C9F07_30630;Name=C9F07_30630;end_range=650,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30630;partial=true PYKI01003054.1 Protein Homology CDS 310 650 . - 2 ID=cds-TGD40989.1;Parent=gene-C9F07_30630;Dbxref=NCBI_GP:TGD40989.1;Name=TGD40989.1;Note=response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport;end_range=650,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456677.1;locus_tag=C9F07_30630;partial=true;product=two-component system response regulator BaeR;protein_id=TGD40989.1;transl_table=11 ##sequence-region PYKI01000929.1 1 650 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000929.1 Genbank region 1 650 . + . ID=PYKI01000929.1:1..650;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000929.1 Genbank gene 1 147 . + . ID=gene-C9F07_08475;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=C9F07_08475;partial=true;start_range=.,1 PYKI01000929.1 Protein Homology CDS 1 147 . + 0 ID=cds-TGE02815.1;Parent=gene-C9F07_08475;Dbxref=NCBI_GP:TGE02815.1;Name=TGE02815.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes;gbkey=CDS;gene=flgL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455677.1;locus_tag=C9F07_08475;partial=true;product=flagellar hook-filament junction protein FlgL;protein_id=TGE02815.1;start_range=.,1;transl_table=11 PYKI01000929.1 Genbank gene 167 385 . - . ID=gene-C9F07_08480;Name=C9F07_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08480 PYKI01000929.1 Protein Homology CDS 167 385 . - 0 ID=cds-TGE02816.1;Parent=gene-C9F07_08480;Dbxref=NCBI_GP:TGE02816.1;Name=TGE02816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001596369.1;locus_tag=C9F07_08480;product=hypothetical protein;protein_id=TGE02816.1;transl_table=11 PYKI01000929.1 Genbank gene 391 650 . - . ID=gene-C9F07_08485;Name=C9F07_08485;end_range=650,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08485;partial=true PYKI01000929.1 Protein Homology CDS 391 650 . - 2 ID=cds-TGE02817.1;Parent=gene-C9F07_08485;Dbxref=NCBI_GP:TGE02817.1;Name=TGE02817.1;end_range=650,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455679.1;locus_tag=C9F07_08485;partial=true;product=hypothetical protein;protein_id=TGE02817.1;transl_table=11 ##sequence-region PYKI01000444.1 1 649 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000444.1 Genbank region 1 649 . + . ID=PYKI01000444.1:1..649;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000444.1 Genbank gene 1 533 . - . ID=gene-C9F07_03430;Name=C9F07_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03430;partial=true;start_range=.,1 PYKI01000444.1 Protein Homology CDS 1 533 . - 0 ID=cds-TGE20251.1;Parent=gene-C9F07_03430;Dbxref=NCBI_GP:TGE20251.1;Name=TGE20251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=C9F07_03430;partial=true;product=hypothetical protein;protein_id=TGE20251.1;start_range=.,1;transl_table=11 PYKI01000444.1 Genbank gene 463 649 . + . ID=gene-C9F07_03435;Name=C9F07_03435;end_range=649,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03435;partial=true PYKI01000444.1 Protein Homology CDS 463 649 . + 0 ID=cds-TGE20252.1;Parent=gene-C9F07_03435;Dbxref=NCBI_GP:TGE20252.1;Name=TGE20252.1;end_range=649,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000242993.1;locus_tag=C9F07_03435;partial=true;product=hypothetical protein;protein_id=TGE20252.1;transl_table=11 ##sequence-region PYKI01001420.1 1 649 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001420.1 Genbank region 1 649 . + . ID=PYKI01001420.1:1..649;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001420.1 Genbank gene 1 649 . + . ID=gene-C9F07_13460;Name=metH;end_range=649,.;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=C9F07_13460;partial=true;start_range=.,1 PYKI01001420.1 Protein Homology CDS 1 649 . + 1 ID=cds-TGD83742.1;Parent=gene-C9F07_13460;Dbxref=NCBI_GP:TGD83742.1;Name=TGD83742.1;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;end_range=649,.;gbkey=CDS;gene=metH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458507.1;locus_tag=C9F07_13460;partial=true;product=methionine synthase;protein_id=TGD83742.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001815.1 1 649 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001815.1 Genbank region 1 649 . + . ID=PYKI01001815.1:1..649;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001815.1 Genbank gene 1 438 . - . ID=gene-C9F07_17445;Name=C9F07_17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17445;partial=true;start_range=.,1 PYKI01001815.1 Protein Homology CDS 1 438 . - 0 ID=cds-TGD64887.1;Parent=gene-C9F07_17445;Dbxref=NCBI_GP:TGD64887.1;Name=TGD64887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457026.1;locus_tag=C9F07_17445;partial=true;product=glycerate 2-kinase;protein_id=TGD64887.1;start_range=.,1;transl_table=11 PYKI01001815.1 Genbank gene 444 649 . - . ID=gene-C9F07_17450;Name=C9F07_17450;end_range=649,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17450;partial=true PYKI01001815.1 Protein Homology CDS 444 649 . - 2 ID=cds-TGD64888.1;Parent=gene-C9F07_17450;Dbxref=NCBI_GP:TGD64888.1;Name=TGD64888.1;end_range=649,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457027.1;locus_tag=C9F07_17450;partial=true;product=gluconate:proton symporter;protein_id=TGD64888.1;transl_table=11 ##sequence-region PYKI01001836.1 1 646 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001836.1 Genbank region 1 646 . + . ID=PYKI01001836.1:1..646;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001836.1 Genbank gene 1 308 . - . ID=gene-C9F07_17660;Name=C9F07_17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17660;partial=true;start_range=.,1 PYKI01001836.1 Protein Homology CDS 1 308 . - 0 ID=cds-TGD63876.1;Parent=gene-C9F07_17660;Dbxref=NCBI_GP:TGD63876.1;Name=TGD63876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456649.1;locus_tag=C9F07_17660;partial=true;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=TGD63876.1;start_range=.,1;transl_table=11 PYKI01001836.1 Genbank gene 305 646 . - . ID=gene-C9F07_17665;Name=C9F07_17665;end_range=646,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17665;partial=true PYKI01001836.1 Protein Homology CDS 305 646 . - 0 ID=cds-TGD63875.1;Parent=gene-C9F07_17665;Dbxref=NCBI_GP:TGD63875.1;Name=TGD63875.1;end_range=646,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=C9F07_17665;partial=true;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=TGD63875.1;transl_table=11 ##sequence-region PYKI01003048.1 1 645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003048.1 Genbank region 1 645 . + . ID=PYKI01003048.1:1..645;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003048.1 Genbank gene 1 645 . + . ID=gene-C9F07_30590;Name=metA;end_range=645,.;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=C9F07_30590;partial=true;start_range=.,1 PYKI01003048.1 Protein Homology CDS 1 645 . + 0 ID=cds-TGD41013.1;Parent=gene-C9F07_30590;Dbxref=NCBI_GP:TGD41013.1;Name=TGD41013.1;end_range=645,.;gbkey=CDS;gene=metA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=C9F07_30590;partial=true;product=homoserine O-succinyltransferase;protein_id=TGD41013.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000789.1 1 645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000789.1 Genbank region 1 645 . + . ID=PYKI01000789.1:1..645;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000789.1 Genbank pseudogene 37 633 . - . ID=gene-C9F07_07105;Name=C9F07_07105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07105;pseudo=true PYKI01000789.1 Protein Homology CDS 37 633 . - 0 ID=cds-C9F07_07105;Parent=gene-C9F07_07105;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455737.1;locus_tag=C9F07_07105;product=nitrate/nitrite two-component system sensor histidine kinase NarX;pseudo=true;transl_table=11 ##sequence-region PYKI01002603.1 1 645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002603.1 Genbank region 1 645 . + . ID=PYKI01002603.1:1..645;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002603.1 Genbank gene 1 521 . + . ID=gene-C9F07_25850;Name=C9F07_25850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25850;partial=true;start_range=.,1 PYKI01002603.1 Protein Homology CDS 1 521 . + 2 ID=cds-TGD49600.1;Parent=gene-C9F07_25850;Dbxref=NCBI_GP:TGD49600.1;Name=TGD49600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455783.1;locus_tag=C9F07_25850;partial=true;product=hypothetical protein;protein_id=TGD49600.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002601.1 1 645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002601.1 Genbank region 1 645 . + . ID=PYKI01002601.1:1..645;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002601.1 Genbank pseudogene 1 627 . - . ID=gene-C9F07_25825;Name=C9F07_25825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25825;pseudo=true PYKI01002601.1 Protein Homology CDS 1 627 . - 0 ID=cds-C9F07_25825;Parent=gene-C9F07_25825;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=C9F07_25825;product=cobyrinic acid a%2Cc-diamide synthase;pseudo=true;transl_table=11 ##sequence-region PYKI01003344.1 1 644 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003344.1 Genbank region 1 644 . + . ID=PYKI01003344.1:1..644;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003344.1 Genbank pseudogene 69 644 . - . ID=gene-C9F07_33655;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=pseudogene;locus_tag=C9F07_33655;pseudo=true PYKI01003344.1 Protein Homology CDS 69 644 . - 0 ID=cds-C9F07_33655;Parent=gene-C9F07_33655;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=foxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=C9F07_33655;product=ferrioxamine B receptor FoxA;pseudo=true;transl_table=11 ##sequence-region PYKI01002804.1 1 644 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002804.1 Genbank region 1 644 . + . ID=PYKI01002804.1:1..644;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002804.1 Genbank pseudogene 74 644 . - . ID=gene-C9F07_28070;Name=C9F07_28070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28070;pseudo=true PYKI01002804.1 Protein Homology CDS 74 644 . - 1 ID=cds-C9F07_28070;Parent=gene-C9F07_28070;Note=regulates genes involved in the biosynthesis and transport of aromatic amino acids%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455820.1;locus_tag=C9F07_28070;product=transcriptional regulator TyrR;pseudo=true;transl_table=11 ##sequence-region PYKI01002662.1 1 644 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002662.1 Genbank region 1 644 . + . ID=PYKI01002662.1:1..644;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002662.1 Genbank gene 1 201 . + . ID=gene-C9F07_26515;Name=C9F07_26515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26515;partial=true;start_range=.,1 PYKI01002662.1 Protein Homology CDS 1 201 . + 0 ID=cds-TGD49199.1;Parent=gene-C9F07_26515;Dbxref=NCBI_GP:TGD49199.1;Name=TGD49199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456517.1;locus_tag=C9F07_26515;partial=true;product=cystine ABC transporter substrate-binding protein;protein_id=TGD49199.1;start_range=.,1;transl_table=11 PYKI01002662.1 Genbank gene 355 644 . + . ID=gene-C9F07_26520;Name=C9F07_26520;end_range=644,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26520;partial=true PYKI01002662.1 Protein Homology CDS 355 644 . + 0 ID=cds-TGD49200.1;Parent=gene-C9F07_26520;Dbxref=NCBI_GP:TGD49200.1;Name=TGD49200.1;Note=catalyzes the formation of pyruvate from D-cysteine;end_range=644,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456516.1;locus_tag=C9F07_26520;partial=true;product=D-cysteine desulfhydrase;protein_id=TGD49200.1;transl_table=11 ##sequence-region PYKI01002398.1 1 643 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002398.1 Genbank region 1 643 . + . ID=PYKI01002398.1:1..643;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002398.1 Genbank gene 1 107 . - . ID=gene-C9F07_23605;Name=C9F07_23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23605;partial=true;start_range=.,1 PYKI01002398.1 Protein Homology CDS 1 107 . - 0 ID=cds-TGD51972.1;Parent=gene-C9F07_23605;Dbxref=NCBI_GP:TGD51972.1;Name=TGD51972.1;Note=streptomycin 3'-adenyltransferase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001083627.1;locus_tag=C9F07_23605;partial=true;product=aminoglycoside resistance protein;protein_id=TGD51972.1;start_range=.,1;transl_table=11 PYKI01002398.1 Genbank gene 135 643 . - . ID=gene-C9F07_23610;Name=C9F07_23610;end_range=643,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23610;partial=true PYKI01002398.1 Protein Homology CDS 135 643 . - 2 ID=cds-TGD51971.1;Parent=gene-C9F07_23610;Dbxref=NCBI_GP:TGD51971.1;Name=TGD51971.1;end_range=643,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456248.1;locus_tag=C9F07_23610;partial=true;product=metal-binding protein ZinT;protein_id=TGD51971.1;transl_table=11 ##sequence-region PYKI01003358.1 1 642 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003358.1 Genbank region 1 642 . + . ID=PYKI01003358.1:1..642;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003358.1 Genbank gene 1 541 . + . ID=gene-C9F07_33825;Name=C9F07_33825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33825;partial=true;start_range=.,1 PYKI01003358.1 Protein Homology CDS 1 541 . + 1 ID=cds-TGD34739.1;Parent=gene-C9F07_33825;Dbxref=NCBI_GP:TGD34739.1;Name=TGD34739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458287.1;locus_tag=C9F07_33825;partial=true;product=LacI family transcriptional regulator;protein_id=TGD34739.1;start_range=.,1;transl_table=11 PYKI01003358.1 Genbank gene 532 642 . - . ID=gene-C9F07_33830;Name=C9F07_33830;end_range=642,.;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F07_33830;partial=true PYKI01003358.1 cmsearch ncRNA 532 642 . - . ID=rna-C9F07_33830;Parent=gene-C9F07_33830;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;end_range=642,.;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_33830;partial=true;product=RtT sRNA PYKI01003358.1 cmsearch exon 532 642 . - . ID=exon-C9F07_33830-1;Parent=rna-C9F07_33830;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;end_range=642,.;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_33830;partial=true;product=RtT sRNA ##sequence-region PYKI01000831.1 1 641 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000831.1 Genbank region 1 641 . + . ID=PYKI01000831.1:1..641;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000831.1 Genbank pseudogene 1 641 . + . ID=gene-C9F07_07585;Name=C9F07_07585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07585;pseudo=true PYKI01000831.1 Protein Homology CDS 1 641 . + 2 ID=cds-C9F07_07585;Parent=gene-C9F07_07585;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461465.1;locus_tag=C9F07_07585;product=dimethyl sulfoxide reductase subunit A;pseudo=true;transl_table=11 ##sequence-region PYKI01000692.1 1 3304 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000692.1 Genbank region 1 3304 . + . ID=PYKI01000692.1:1..3304;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000692.1 Genbank gene 1 1041 . + . ID=gene-C9F07_06050;Name=C9F07_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06050;partial=true;start_range=.,1 PYKI01000692.1 Protein Homology CDS 1 1041 . + 0 ID=cds-TGE11327.1;Parent=gene-C9F07_06050;Dbxref=NCBI_GP:TGE11327.1;Name=TGE11327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=C9F07_06050;partial=true;product=MFS transporter;protein_id=TGE11327.1;start_range=.,1;transl_table=11 PYKI01000692.1 Genbank gene 1160 1507 . + . ID=gene-C9F07_06055;Name=C9F07_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06055 PYKI01000692.1 Protein Homology CDS 1160 1507 . + 0 ID=cds-TGE11328.1;Parent=gene-C9F07_06055;Dbxref=NCBI_GP:TGE11328.1;Name=TGE11328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=C9F07_06055;product=DUF488 domain-containing protein;protein_id=TGE11328.1;transl_table=11 PYKI01000692.1 Genbank gene 1493 1804 . - . ID=gene-C9F07_06060;Name=C9F07_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06060 PYKI01000692.1 Protein Homology CDS 1493 1804 . - 0 ID=cds-TGE11329.1;Parent=gene-C9F07_06060;Dbxref=NCBI_GP:TGE11329.1;Name=TGE11329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456233.1;locus_tag=C9F07_06060;product=hypothetical protein;protein_id=TGE11329.1;transl_table=11 PYKI01000692.1 Genbank gene 1873 2124 . - . ID=gene-C9F07_06065;Name=C9F07_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06065 PYKI01000692.1 Protein Homology CDS 1873 2124 . - 0 ID=cds-TGE11330.1;Parent=gene-C9F07_06065;Dbxref=NCBI_GP:TGE11330.1;Name=TGE11330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=C9F07_06065;product=DUF333 domain-containing protein;protein_id=TGE11330.1;transl_table=11 PYKI01000692.1 Genbank gene 2324 2422 . + . ID=gene-C9F07_06070;Name=C9F07_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06070 PYKI01000692.1 Protein Homology CDS 2324 2422 . + 0 ID=cds-TGE11331.1;Parent=gene-C9F07_06070;Dbxref=NCBI_GP:TGE11331.1;Name=TGE11331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=C9F07_06070;product=hypothetical protein;protein_id=TGE11331.1;transl_table=11 PYKI01000692.1 Genbank gene 2561 2809 . - . ID=gene-C9F07_06075;Name=C9F07_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06075 PYKI01000692.1 Protein Homology CDS 2561 2809 . - 0 ID=cds-TGE11332.1;Parent=gene-C9F07_06075;Dbxref=NCBI_GP:TGE11332.1;Name=TGE11332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456236.1;locus_tag=C9F07_06075;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=TGE11332.1;transl_table=11 PYKI01000692.1 Genbank gene 2817 3002 . - . ID=gene-C9F07_06080;Name=C9F07_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06080 PYKI01000692.1 Protein Homology CDS 2817 3002 . - 0 ID=cds-TGE11333.1;Parent=gene-C9F07_06080;Dbxref=NCBI_GP:TGE11333.1;Name=TGE11333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012512826.1;locus_tag=C9F07_06080;product=hypothetical protein;protein_id=TGE11333.1;transl_table=11 ##sequence-region PYKI01002332.1 1 641 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002332.1 Genbank region 1 641 . + . ID=PYKI01002332.1:1..641;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002332.1 Genbank gene 1 641 . - . ID=gene-C9F07_22870;Name=C9F07_22870;end_range=641,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22870;partial=true;start_range=.,1 PYKI01002332.1 Protein Homology CDS 1 641 . - 1 ID=cds-TGD53733.1;Parent=gene-C9F07_22870;Dbxref=NCBI_GP:TGD53733.1;Name=TGD53733.1;end_range=641,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458049.1;locus_tag=C9F07_22870;partial=true;product=DNA polymerase I;protein_id=TGD53733.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001362.1 1 641 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001362.1 Genbank region 1 641 . + . ID=PYKI01001362.1:1..641;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001362.1 Genbank gene 1 641 . + . ID=gene-C9F07_12800;Name=mdoD;end_range=641,.;gbkey=Gene;gene=mdoD;gene_biotype=protein_coding;gene_synonym=opgD;locus_tag=C9F07_12800;partial=true;start_range=.,1 PYKI01001362.1 Protein Homology CDS 1 641 . + 1 ID=cds-TGD84998.1;Parent=gene-C9F07_12800;Dbxref=NCBI_GP:TGD84998.1;Name=TGD84998.1;Note=involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans;end_range=641,.;gbkey=CDS;gene=mdoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455875.1;locus_tag=C9F07_12800;partial=true;product=glucan biosynthesis protein D;protein_id=TGD84998.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001160.1 1 640 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001160.1 Genbank region 1 640 . + . ID=PYKI01001160.1:1..640;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001160.1 Genbank gene 133 640 . + . ID=gene-C9F07_10855;Name=C9F07_10855;end_range=640,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10855;partial=true PYKI01001160.1 Protein Homology CDS 133 640 . + 0 ID=cds-TGD93412.1;Parent=gene-C9F07_10855;Dbxref=NCBI_GP:TGD93412.1;Name=TGD93412.1;end_range=640,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457970.1;locus_tag=C9F07_10855;partial=true;product=DUF1454 domain-containing protein;protein_id=TGD93412.1;transl_table=11 ##sequence-region PYKI01001320.1 1 640 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001320.1 Genbank region 1 640 . + . ID=PYKI01001320.1:1..640;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001320.1 Genbank pseudogene 1 558 . + . ID=gene-C9F07_12365;Name=C9F07_12365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12365;pseudo=true PYKI01001320.1 Protein Homology CDS 1 558 . + 0 ID=cds-C9F07_12365;Parent=gene-C9F07_12365;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=C9F07_12365;product=D-serine/D-alanine/glycine transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01000310.1 1 640 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000310.1 Genbank region 1 640 . + . ID=PYKI01000310.1:1..640;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000310.1 Genbank gene 1 640 . + . ID=gene-C9F07_02105;Name=rpsA;end_range=640,.;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=C9F07_02105;partial=true;start_range=.,1 PYKI01000310.1 Protein Homology CDS 1 640 . + 1 ID=cds-TGE27777.1;Parent=gene-C9F07_02105;Dbxref=NCBI_GP:TGE27777.1;Name=TGE27777.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;end_range=640,.;gbkey=CDS;gene=rpsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=C9F07_02105;partial=true;product=30S ribosomal protein S1;protein_id=TGE27777.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003150.1 1 639 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003150.1 Genbank region 1 639 . + . ID=PYKI01003150.1:1..639;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003150.1 Genbank gene 1 639 . + . ID=gene-C9F07_31600;Name=C9F07_31600;end_range=639,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31600;partial=true;start_range=.,1 PYKI01003150.1 Protein Homology CDS 1 639 . + 1 ID=cds-TGD38492.1;Parent=gene-C9F07_31600;Dbxref=NCBI_GP:TGD38492.1;Name=TGD38492.1;end_range=639,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750923.1;locus_tag=C9F07_31600;partial=true;product=hypothetical protein;protein_id=TGD38492.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001081.1 1 639 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001081.1 Genbank region 1 639 . + . ID=PYKI01001081.1:1..639;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001081.1 Genbank gene 1 295 . + . ID=gene-C9F07_10040;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=C9F07_10040;partial=true;start_range=.,1 PYKI01001081.1 Protein Homology CDS 1 295 . + 1 ID=cds-TGD95732.1;Parent=gene-C9F07_10040;Dbxref=NCBI_GP:TGD95732.1;Name=TGD95732.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457748.1;locus_tag=C9F07_10040;partial=true;product=rod shape-determining protein MreD;protein_id=TGD95732.1;start_range=.,1;transl_table=11 PYKI01001081.1 Genbank gene 304 639 . + . ID=gene-C9F07_10045;Name=maf;end_range=639,.;gbkey=Gene;gene=maf;gene_biotype=protein_coding;locus_tag=C9F07_10045;partial=true PYKI01001081.1 Protein Homology CDS 304 639 . + 0 ID=cds-TGD95733.1;Parent=gene-C9F07_10045;Dbxref=NCBI_GP:TGD95733.1;Name=TGD95733.1;end_range=639,.;gbkey=CDS;gene=maf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=C9F07_10045;partial=true;product=septum formation protein Maf;protein_id=TGD95733.1;transl_table=11 ##sequence-region PYKI01001256.1 1 639 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001256.1 Genbank region 1 639 . + . ID=PYKI01001256.1:1..639;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001256.1 Genbank gene 1 161 . + . ID=gene-C9F07_11725;Name=C9F07_11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11725;partial=true;start_range=.,1 PYKI01001256.1 Protein Homology CDS 1 161 . + 2 ID=cds-TGD89512.1;Parent=gene-C9F07_11725;Dbxref=NCBI_GP:TGD89512.1;Name=TGD89512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456838.1;locus_tag=C9F07_11725;partial=true;product=nucleoside triphosphatase NudI;protein_id=TGD89512.1;start_range=.,1;transl_table=11 PYKI01001256.1 Genbank gene 207 639 . - . ID=gene-C9F07_11730;Name=C9F07_11730;end_range=639,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11730;partial=true PYKI01001256.1 Protein Homology CDS 207 639 . - 1 ID=cds-TGD89513.1;Parent=gene-C9F07_11730;Dbxref=NCBI_GP:TGD89513.1;Name=TGD89513.1;Note=catalyzes the of heptose(II) of the outer membrane lipopolysaccharide core;end_range=639,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=C9F07_11730;partial=true;product=histidine phosphatase family protein;protein_id=TGD89513.1;transl_table=11 ##sequence-region PYKI01002310.1 1 3275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002310.1 Genbank region 1 3275 . + . ID=PYKI01002310.1:1..3275;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002310.1 Genbank gene 1 984 . + . ID=gene-C9F07_22645;Name=C9F07_22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22645;partial=true;start_range=.,1 PYKI01002310.1 Protein Homology CDS 1 984 . + 0 ID=cds-TGD54253.1;Parent=gene-C9F07_22645;Dbxref=NCBI_GP:TGD54253.1;Name=TGD54253.1;Note=regulates the expression of the operons for the enzymes involved in galactarate%2C glucarate and glycerate utilization;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454818.1;locus_tag=C9F07_22645;partial=true;product=carbohydrate diacid regulon transcriptional regulator CdaR;protein_id=TGD54253.1;start_range=.,1;transl_table=11 PYKI01002310.1 Genbank gene 1106 3275 . - . ID=gene-C9F07_22650;Name=C9F07_22650;end_range=3275,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22650;partial=true PYKI01002310.1 Protein Homology CDS 1106 3275 . - 1 ID=cds-TGD54254.1;Parent=gene-C9F07_22650;Dbxref=NCBI_GP:TGD54254.1;Name=TGD54254.1;end_range=3275,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527551.1;locus_tag=C9F07_22650;partial=true;product=viral enhancin protein;protein_id=TGD54254.1;transl_table=11 ##sequence-region PYKI01001582.1 1 639 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001582.1 Genbank region 1 639 . + . ID=PYKI01001582.1:1..639;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001582.1 Genbank gene 1 639 . + . ID=gene-C9F07_15135;Name=C9F07_15135;end_range=639,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15135;partial=true;start_range=.,1 PYKI01001582.1 Protein Homology CDS 1 639 . + 1 ID=cds-TGD72433.1;Parent=gene-C9F07_15135;Dbxref=NCBI_GP:TGD72433.1;Name=TGD72433.1;end_range=639,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455188.1;locus_tag=C9F07_15135;partial=true;product=DMSO reductase;protein_id=TGD72433.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002927.1 1 639 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002927.1 Genbank region 1 639 . + . ID=PYKI01002927.1:1..639;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002927.1 Genbank gene 187 639 . + . ID=gene-C9F07_29335;Name=C9F07_29335;end_range=639,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29335;partial=true PYKI01002927.1 Protein Homology CDS 187 639 . + 0 ID=cds-TGD43088.1;Parent=gene-C9F07_29335;Dbxref=NCBI_GP:TGD43088.1;Name=TGD43088.1;Note=laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification;end_range=639,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=C9F07_29335;partial=true;product=multicopper oxidase;protein_id=TGD43088.1;transl_table=11 ##sequence-region PYKI01003136.1 1 639 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003136.1 Genbank region 1 639 . + . ID=PYKI01003136.1:1..639;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003136.1 Genbank gene 1 470 . + . ID=gene-C9F07_31410;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=C9F07_31410;partial=true;start_range=.,1 PYKI01003136.1 Protein Homology CDS 1 470 . + 2 ID=cds-TGD38909.1;Parent=gene-C9F07_31410;Dbxref=NCBI_GP:TGD38909.1;Name=TGD38909.1;Note=similar to periplasmic-binding component of ABC transporters;gbkey=CDS;gene=glnH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=C9F07_31410;partial=true;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=TGD38909.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002228.1 1 638 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002228.1 Genbank region 1 638 . + . ID=PYKI01002228.1:1..638;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002228.1 Genbank gene 1 638 . - . ID=gene-C9F07_21740;Name=C9F07_21740;end_range=638,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21740;partial=true;start_range=.,1 PYKI01002228.1 Protein Homology CDS 1 638 . - 2 ID=cds-TGD56201.1;Parent=gene-C9F07_21740;Dbxref=NCBI_GP:TGD56201.1;Name=TGD56201.1;Note=This protein performs the mismatch recognition step during the DNA repair process;end_range=638,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457300.1;locus_tag=C9F07_21740;partial=true;product=DNA mismatch repair protein MutS;protein_id=TGD56201.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000393.1 1 638 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000393.1 Genbank region 1 638 . + . ID=PYKI01000393.1:1..638;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000393.1 Genbank gene 1 162 . - . ID=gene-C9F07_02970;Name=C9F07_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02970;partial=true;start_range=.,1 PYKI01000393.1 Protein Homology CDS 1 162 . - 0 ID=cds-TGE22778.1;Parent=gene-C9F07_02970;Dbxref=NCBI_GP:TGE22778.1;Name=TGE22778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=C9F07_02970;partial=true;product=glutamate-ammonia-ligase adenylyltransferase;protein_id=TGE22778.1;start_range=.,1;transl_table=11 PYKI01000393.1 Genbank gene 280 638 . - . ID=gene-C9F07_02975;Name=C9F07_02975;end_range=638,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02975;partial=true PYKI01000393.1 Protein Homology CDS 280 638 . - 2 ID=cds-TGE22777.1;Parent=gene-C9F07_02975;Dbxref=NCBI_GP:TGE22777.1;Name=TGE22777.1;end_range=638,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457593.1;locus_tag=C9F07_02975;partial=true;product=inorganic triphosphatase;protein_id=TGE22777.1;transl_table=11 ##sequence-region PYKI01000898.1 1 638 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000898.1 Genbank region 1 638 . + . ID=PYKI01000898.1:1..638;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000898.1 Genbank gene 1 448 . - . ID=gene-C9F07_08215;Name=C9F07_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08215;partial=true;start_range=.,1 PYKI01000898.1 Protein Homology CDS 1 448 . - 0 ID=cds-TGE03451.1;Parent=gene-C9F07_08215;Dbxref=NCBI_GP:TGE03451.1;Name=TGE03451.1;Note=catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=C9F07_08215;partial=true;product=23S rRNA pseudouridine(955/2504/2580) synthase;protein_id=TGE03451.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001867.1 1 638 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001867.1 Genbank region 1 638 . + . ID=PYKI01001867.1:1..638;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001867.1 Genbank gene 1 638 . + . ID=gene-C9F07_17975;Name=ompF;end_range=638,.;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=C9F07_17975;partial=true;start_range=.,1 PYKI01001867.1 Protein Homology CDS 1 638 . + 1 ID=cds-TGD62784.1;Parent=gene-C9F07_17975;Dbxref=NCBI_GP:TGD62784.1;Name=TGD62784.1;end_range=638,.;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455485.1;locus_tag=C9F07_17975;partial=true;product=porin OmpF;protein_id=TGD62784.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002394.1 1 636 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002394.1 Genbank region 1 636 . + . ID=PYKI01002394.1:1..636;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002394.1 Genbank gene 1 435 . - . ID=gene-C9F07_23565;Name=C9F07_23565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23565;partial=true;start_range=.,1 PYKI01002394.1 Protein Homology CDS 1 435 . - 0 ID=cds-TGD52089.1;Parent=gene-C9F07_23565;Dbxref=NCBI_GP:TGD52089.1;Name=TGD52089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455391.1;locus_tag=C9F07_23565;partial=true;product=DNA-binding transcriptional repressor DeoR;protein_id=TGD52089.1;start_range=.,1;transl_table=11 PYKI01002394.1 Genbank gene 507 636 . - . ID=gene-C9F07_23570;Name=C9F07_23570;end_range=636,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23570;partial=true PYKI01002394.1 Protein Homology CDS 507 636 . - 1 ID=cds-TGD52090.1;Parent=gene-C9F07_23570;Dbxref=NCBI_GP:TGD52090.1;Name=TGD52090.1;end_range=636,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455392.1;locus_tag=C9F07_23570;partial=true;product=undecaprenyl-diphosphate phosphatase;protein_id=TGD52090.1;transl_table=11 ##sequence-region PYKI01001061.1 1 636 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001061.1 Genbank region 1 636 . + . ID=PYKI01001061.1:1..636;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001061.1 Genbank gene 1 556 . - . ID=gene-C9F07_09785;Name=C9F07_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09785;partial=true;start_range=.,1 PYKI01001061.1 Protein Homology CDS 1 556 . - 0 ID=cds-TGD96224.1;Parent=gene-C9F07_09785;Dbxref=NCBI_GP:TGD96224.1;Name=TGD96224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459533.1;locus_tag=C9F07_09785;partial=true;product=DUF2145 domain-containing protein;protein_id=TGD96224.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003582.1 1 636 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003582.1 Genbank region 1 636 . + . ID=PYKI01003582.1:1..636;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003582.1 Genbank pseudogene 1 159 . + . ID=gene-C9F07_36145;Name=C9F07_36145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_36145;pseudo=true PYKI01003582.1 Protein Homology CDS 1 159 . + 0 ID=cds-C9F07_36145;Parent=gene-C9F07_36145;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455413.1;locus_tag=C9F07_36145;product=sulfatase;pseudo=true;transl_table=11 PYKI01003582.1 Genbank gene 156 356 . - . ID=gene-C9F07_36150;Name=C9F07_36150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36150 PYKI01003582.1 Protein Homology CDS 156 356 . - 0 ID=cds-TGD30003.1;Parent=gene-C9F07_36150;Dbxref=NCBI_GP:TGD30003.1;Name=TGD30003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533186.1;locus_tag=C9F07_36150;product=hypothetical protein;protein_id=TGD30003.1;transl_table=11 PYKI01003582.1 Genbank gene 378 636 . - . ID=gene-C9F07_36155;Name=C9F07_36155;end_range=636,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36155;partial=true PYKI01003582.1 Protein Homology CDS 378 636 . - 1 ID=cds-TGD30004.1;Parent=gene-C9F07_36155;Dbxref=NCBI_GP:TGD30004.1;Name=TGD30004.1;end_range=636,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455414.1;locus_tag=C9F07_36155;partial=true;product=arginine ABC transporter substrate-binding protein;protein_id=TGD30004.1;transl_table=11 ##sequence-region PYKI01000753.1 1 3271 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000753.1 Genbank region 1 3271 . + . ID=PYKI01000753.1:1..3271;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000753.1 Genbank gene 1 647 . - . ID=gene-C9F07_06645;Name=C9F07_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06645;partial=true;start_range=.,1 PYKI01000753.1 Protein Homology CDS 1 647 . - 0 ID=cds-TGE10682.1;Parent=gene-C9F07_06645;Dbxref=NCBI_GP:TGE10682.1;Name=TGE10682.1;Note=with GsiABD is involved in the transport of glutathione into the cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455384.1;locus_tag=C9F07_06645;partial=true;product=glutathione ABC transporter permease GsiC;protein_id=TGE10682.1;start_range=.,1;transl_table=11 PYKI01000753.1 Genbank gene 708 2246 . - . ID=gene-C9F07_06650;Name=C9F07_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06650 PYKI01000753.1 Protein Homology CDS 708 2246 . - 0 ID=cds-TGE10683.1;Parent=gene-C9F07_06650;Dbxref=NCBI_GP:TGE10683.1;Name=TGE10683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455383.1;locus_tag=C9F07_06650;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=TGE10683.1;transl_table=11 PYKI01000753.1 Genbank gene 2279 3271 . - . ID=gene-C9F07_06655;Name=C9F07_06655;end_range=3271,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06655;partial=true PYKI01000753.1 Protein Homology CDS 2279 3271 . - 0 ID=cds-TGE10684.1;Parent=gene-C9F07_06655;Dbxref=NCBI_GP:TGE10684.1;Name=TGE10684.1;Note=with GsiBCD is involved in glutathione import%3B GsiA contains 2 ATP-binding domains;end_range=3271,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455382.1;locus_tag=C9F07_06655;partial=true;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=TGE10684.1;transl_table=11 ##sequence-region PYKI01002326.1 1 636 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002326.1 Genbank region 1 636 . + . ID=PYKI01002326.1:1..636;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002326.1 Genbank gene 1 636 . - . ID=gene-C9F07_22805;Name=C9F07_22805;end_range=636,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22805;partial=true;start_range=.,1 PYKI01002326.1 Protein Homology CDS 1 636 . - 2 ID=cds-TGD53972.1;Parent=gene-C9F07_22805;Dbxref=NCBI_GP:TGD53972.1;Name=TGD53972.1;Note=this helicase is not essential cell growth;end_range=636,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455358.1;locus_tag=C9F07_22805;partial=true;product=ATP-dependent RNA helicase RhlE;protein_id=TGD53972.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002758.1 1 636 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002758.1 Genbank region 1 636 . + . ID=PYKI01002758.1:1..636;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002758.1 Genbank gene 1 636 . + . ID=gene-C9F07_27520;Name=coaBC;end_range=636,.;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=C9F07_27520;partial=true;start_range=.,1 PYKI01002758.1 Protein Homology CDS 1 636 . + 1 ID=cds-TGD46759.1;Parent=gene-C9F07_27520;Dbxref=NCBI_GP:TGD46759.1;Name=TGD46759.1;end_range=636,.;gbkey=CDS;gene=coaBC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462630.3;locus_tag=C9F07_27520;partial=true;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=TGD46759.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000193.1 1 636 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000193.1 Genbank region 1 636 . + . ID=PYKI01000193.1:1..636;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000193.1 Genbank pseudogene 96 599 . + . ID=gene-C9F07_01305;Name=potC;gbkey=Gene;gene=potC;gene_biotype=pseudogene;locus_tag=C9F07_01305;pseudo=true PYKI01000193.1 Protein Homology CDS 96 599 . + 0 ID=cds-C9F07_01305;Parent=gene-C9F07_01305;Note=can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotC is a membrane component%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=potC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455715.1;locus_tag=C9F07_01305;product=spermidine/putrescine ABC transporter permease PotC;pseudo=true;transl_table=11 ##sequence-region PYKI01000416.1 1 635 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000416.1 Genbank region 1 635 . + . ID=PYKI01000416.1:1..635;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000416.1 Genbank gene 1 431 . + . ID=gene-C9F07_03200;Name=C9F07_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03200;partial=true;start_range=.,1 PYKI01000416.1 Protein Homology CDS 1 431 . + 2 ID=cds-TGE20935.1;Parent=gene-C9F07_03200;Dbxref=NCBI_GP:TGE20935.1;Name=TGE20935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458939.1;locus_tag=C9F07_03200;partial=true;product=hypothetical protein;protein_id=TGE20935.1;start_range=.,1;transl_table=11 PYKI01000416.1 Genbank gene 428 635 . + . ID=gene-C9F07_03205;Name=C9F07_03205;end_range=635,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03205;partial=true PYKI01000416.1 Protein Homology CDS 428 635 . + 0 ID=cds-TGE20936.1;Parent=gene-C9F07_03205;Dbxref=NCBI_GP:TGE20936.1;Name=TGE20936.1;end_range=635,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458938.1;locus_tag=C9F07_03205;partial=true;product=hypothetical protein;protein_id=TGE20936.1;transl_table=11 ##sequence-region PYKI01000167.1 1 635 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000167.1 Genbank region 1 635 . + . ID=PYKI01000167.1:1..635;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000167.1 Genbank gene 1 270 . + . ID=gene-C9F07_01140;Name=C9F07_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01140;partial=true;start_range=.,1 PYKI01000167.1 Protein Homology CDS 1 270 . + 0 ID=cds-TGE30060.1;Parent=gene-C9F07_01140;Dbxref=NCBI_GP:TGE30060.1;Name=TGE30060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001350877.1;locus_tag=C9F07_01140;partial=true;product=thioesterase family protein;protein_id=TGE30060.1;start_range=.,1;transl_table=11 PYKI01000167.1 Genbank pseudogene 314 562 . + . ID=gene-C9F07_01145;Name=C9F07_01145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01145;pseudo=true PYKI01000167.1 Protein Homology CDS 314 562 . + 0 ID=cds-C9F07_01145;Parent=gene-C9F07_01145;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457796.1;locus_tag=C9F07_01145;product=EamA family transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01000996.1 1 635 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000996.1 Genbank region 1 635 . + . ID=PYKI01000996.1:1..635;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000996.1 Genbank pseudogene 24 302 . + . ID=gene-C9F07_09095;Name=C9F07_09095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09095;pseudo=true PYKI01000996.1 Protein Homology CDS 24 302 . + 0 ID=cds-C9F07_09095;Parent=gene-C9F07_09095;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001674212.1;locus_tag=C9F07_09095;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 PYKI01000996.1 Genbank gene 348 635 . - . ID=gene-C9F07_09100;Name=C9F07_09100;end_range=635,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09100;partial=true PYKI01000996.1 Protein Homology CDS 348 635 . - 0 ID=cds-TGD98846.1;Parent=gene-C9F07_09100;Dbxref=NCBI_GP:TGD98846.1;Name=TGD98846.1;end_range=635,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455137.1;locus_tag=C9F07_09100;partial=true;product=fimbriae assembly protein;protein_id=TGD98846.1;transl_table=11 ##sequence-region PYKI01001816.1 1 634 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001816.1 Genbank region 1 634 . + . ID=PYKI01001816.1:1..634;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001816.1 Genbank gene 1 326 . - . ID=gene-C9F07_17455;Name=C9F07_17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17455;partial=true;start_range=.,1 PYKI01001816.1 Protein Homology CDS 1 326 . - 0 ID=cds-TGD64885.1;Parent=gene-C9F07_17455;Dbxref=NCBI_GP:TGD64885.1;Name=TGD64885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455228.1;locus_tag=C9F07_17455;partial=true;product=hypothetical protein;protein_id=TGD64885.1;start_range=.,1;transl_table=11 PYKI01001816.1 Genbank gene 394 634 . - . ID=gene-C9F07_17460;Name=C9F07_17460;end_range=634,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17460;partial=true PYKI01001816.1 Protein Homology CDS 394 634 . - 1 ID=cds-TGD64886.1;Parent=gene-C9F07_17460;Dbxref=NCBI_GP:TGD64886.1;Name=TGD64886.1;end_range=634,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455227.1;locus_tag=C9F07_17460;partial=true;product=hypothetical protein;protein_id=TGD64886.1;transl_table=11 ##sequence-region PYKI01001030.1 1 634 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001030.1 Genbank region 1 634 . + . ID=PYKI01001030.1:1..634;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001030.1 Genbank gene 1 231 . + . ID=gene-C9F07_09500;Name=C9F07_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09500;partial=true;start_range=.,1 PYKI01001030.1 Protein Homology CDS 1 231 . + 0 ID=cds-TGD97063.1;Parent=gene-C9F07_09500;Dbxref=NCBI_GP:TGD97063.1;Name=TGD97063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455422.1;locus_tag=C9F07_09500;partial=true;product=hypothetical protein;protein_id=TGD97063.1;start_range=.,1;transl_table=11 PYKI01001030.1 Genbank gene 228 634 . - . ID=gene-C9F07_09505;Name=C9F07_09505;end_range=634,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09505;partial=true PYKI01001030.1 Protein Homology CDS 228 634 . - 2 ID=cds-TGD97064.1;Parent=gene-C9F07_09505;Dbxref=NCBI_GP:TGD97064.1;Name=TGD97064.1;Note=catalyzes the cleavage of the bond between muamic acid and l-alanine;end_range=634,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455421.1;locus_tag=C9F07_09505;partial=true;product=N-acetylmuramoyl-L-alanine amidase;protein_id=TGD97064.1;transl_table=11 ##sequence-region PYKI01001962.1 1 633 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001962.1 Genbank region 1 633 . + . ID=PYKI01001962.1:1..633;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001962.1 Genbank pseudogene 81 633 . + . ID=gene-C9F07_18935;Name=C9F07_18935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18935;pseudo=true PYKI01001962.1 Protein Homology CDS 81 633 . + 0 ID=cds-C9F07_18935;Parent=gene-C9F07_18935;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988789.1;locus_tag=C9F07_18935;product=Clp protease ClpE;pseudo=true;transl_table=11 ##sequence-region PYKI01000770.1 1 6379 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000770.1 Genbank region 1 6379 . + . ID=PYKI01000770.1:1..6379;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000770.1 Genbank gene 280 1116 . + . ID=gene-C9F07_06800;Name=C9F07_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06800 PYKI01000770.1 Protein Homology CDS 280 1116 . + 0 ID=cds-TGE09212.1;Parent=gene-C9F07_06800;Dbxref=NCBI_GP:TGE09212.1;Name=TGE09212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458420.1;locus_tag=C9F07_06800;product=adenine-specific DNA-methyltransferase;protein_id=TGE09212.1;transl_table=11 PYKI01000770.1 Genbank gene 1134 1811 . + . ID=gene-C9F07_06805;Name=C9F07_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06805 PYKI01000770.1 Protein Homology CDS 1134 1811 . + 0 ID=cds-TGE09213.1;Parent=gene-C9F07_06805;Dbxref=NCBI_GP:TGE09213.1;Name=TGE09213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000816289.1;locus_tag=C9F07_06805;product=ribulose-phosphate 3-epimerase;protein_id=TGE09213.1;transl_table=11 PYKI01000770.1 Genbank gene 1804 2562 . + . ID=gene-C9F07_06810;Name=C9F07_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06810 PYKI01000770.1 Protein Homology CDS 1804 2562 . + 0 ID=cds-TGE09214.1;Parent=gene-C9F07_06810;Dbxref=NCBI_GP:TGE09214.1;Name=TGE09214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=C9F07_06810;product=phosphoglycolate phosphatase;protein_id=TGE09214.1;transl_table=11 PYKI01000770.1 Genbank gene 2555 3559 . + . ID=gene-C9F07_06815;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=C9F07_06815 PYKI01000770.1 Protein Homology CDS 2555 3559 . + 0 ID=cds-TGE09215.1;Parent=gene-C9F07_06815;Dbxref=NCBI_GP:TGE09215.1;Name=TGE09215.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458423.1;locus_tag=C9F07_06815;product=tryptophan--tRNA ligase;protein_id=TGE09215.1;transl_table=11 PYKI01000770.1 Genbank gene 3704 3874 . - . ID=gene-C9F07_06820;Name=C9F07_06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06820 PYKI01000770.1 Protein Homology CDS 3704 3874 . - 0 ID=cds-TGE09216.1;Parent=gene-C9F07_06820;Dbxref=NCBI_GP:TGE09216.1;Name=TGE09216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458424.1;locus_tag=C9F07_06820;product=DUF4223 domain-containing protein;protein_id=TGE09216.1;transl_table=11 PYKI01000770.1 Genbank gene 4068 6379 . - . ID=gene-C9F07_06825;Name=C9F07_06825;end_range=6379,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06825;partial=true PYKI01000770.1 Protein Homology CDS 4068 6379 . - 2 ID=cds-TGE09217.1;Parent=gene-C9F07_06825;Dbxref=NCBI_GP:TGE09217.1;Name=TGE09217.1;end_range=6379,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001552215.1;locus_tag=C9F07_06825;partial=true;product=autotransporter adhesin BigA;protein_id=TGE09217.1;transl_table=11 ##sequence-region PYKI01002477.1 1 633 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002477.1 Genbank region 1 633 . + . ID=PYKI01002477.1:1..633;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002477.1 Genbank pseudogene 81 296 . - . ID=gene-C9F07_24460;Name=C9F07_24460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24460;pseudo=true PYKI01002477.1 Protein Homology CDS 81 296 . - 0 ID=cds-C9F07_24460;Parent=gene-C9F07_24460;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457302.1;locus_tag=C9F07_24460;product=MFS transporter;pseudo=true;transl_table=11 PYKI01002477.1 Genbank gene 384 633 . + . ID=gene-C9F07_24465;Name=C9F07_24465;end_range=633,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24465;partial=true PYKI01002477.1 Protein Homology CDS 384 633 . + 0 ID=cds-TGD50532.1;Parent=gene-C9F07_24465;Dbxref=NCBI_GP:TGD50532.1;Name=TGD50532.1;end_range=633,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461833.1;locus_tag=C9F07_24465;partial=true;product=LysR family transcriptional regulator;protein_id=TGD50532.1;transl_table=11 ##sequence-region PYKI01002728.1 1 633 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002728.1 Genbank region 1 633 . + . ID=PYKI01002728.1:1..633;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002728.1 Genbank pseudogene 76 633 . + . ID=gene-C9F07_27235;Name=C9F07_27235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27235;pseudo=true PYKI01002728.1 Protein Homology CDS 76 633 . + 0 ID=cds-C9F07_27235;Parent=gene-C9F07_27235;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=C9F07_27235;product=ubiquinol oxidase subunit II;pseudo=true;transl_table=11 ##sequence-region PYKI01000349.1 1 632 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000349.1 Genbank region 1 632 . + . ID=PYKI01000349.1:1..632;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000349.1 Genbank gene 75 632 . + . ID=gene-C9F07_02590;Name=C9F07_02590;end_range=632,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02590;partial=true PYKI01000349.1 Protein Homology CDS 75 632 . + 0 ID=cds-TGE26824.1;Parent=gene-C9F07_02590;Dbxref=NCBI_GP:TGE26824.1;Name=TGE26824.1;end_range=632,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001427920.1;locus_tag=C9F07_02590;partial=true;product=structural domain protein;protein_id=TGE26824.1;transl_table=11 ##sequence-region PYKI01002057.1 1 632 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002057.1 Genbank region 1 632 . + . ID=PYKI01002057.1:1..632;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002057.1 Genbank gene 1 632 . + . ID=gene-C9F07_19920;Name=hscA;end_range=632,.;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=C9F07_19920;partial=true;start_range=.,1 PYKI01002057.1 Protein Homology CDS 1 632 . + 1 ID=cds-TGD59943.1;Parent=gene-C9F07_19920;Dbxref=NCBI_GP:TGD59943.1;Name=TGD59943.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;end_range=632,.;gbkey=CDS;gene=hscA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=C9F07_19920;partial=true;product=Fe-S protein assembly chaperone HscA;protein_id=TGD59943.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001187.1 1 631 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001187.1 Genbank region 1 631 . + . ID=PYKI01001187.1:1..631;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001187.1 Genbank pseudogene 69 557 . + . ID=gene-C9F07_11110;Name=C9F07_11110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11110;pseudo=true PYKI01001187.1 Protein Homology CDS 69 557 . + 0 ID=cds-C9F07_11110;Parent=gene-C9F07_11110;Note=involved in the first step of glutathione biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457216.1;locus_tag=C9F07_11110;product=glutamate--cysteine ligase;pseudo=true;transl_table=11 ##sequence-region PYKI01003034.1 1 631 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003034.1 Genbank region 1 631 . + . ID=PYKI01003034.1:1..631;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003034.1 Genbank gene 261 631 . + . ID=gene-C9F07_30455;Name=C9F07_30455;end_range=631,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30455;partial=true PYKI01003034.1 Protein Homology CDS 261 631 . + 0 ID=cds-TGD41072.1;Parent=gene-C9F07_30455;Dbxref=NCBI_GP:TGD41072.1;Name=TGD41072.1;end_range=631,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456480.1;locus_tag=C9F07_30455;partial=true;product=flagellar biosynthetic protein FlhB;protein_id=TGD41072.1;transl_table=11 ##sequence-region PYKI01002078.1 1 631 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002078.1 Genbank region 1 631 . + . ID=PYKI01002078.1:1..631;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002078.1 Genbank pseudogene 1 561 . + . ID=gene-C9F07_20155;Name=C9F07_20155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20155;pseudo=true PYKI01002078.1 Protein Homology CDS 1 561 . + 0 ID=cds-C9F07_20155;Parent=gene-C9F07_20155;Note=penicillin-insensitive transglycosylase/transpeptidase%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=C9F07_20155;product=penicillin-binding protein 1C;pseudo=true;transl_table=11 ##sequence-region PYKI01003042.1 1 630 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003042.1 Genbank region 1 630 . + . ID=PYKI01003042.1:1..630;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003042.1 Genbank gene 1 426 . - . ID=gene-C9F07_30535;Name=C9F07_30535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30535;partial=true;start_range=.,1 PYKI01003042.1 Protein Homology CDS 1 426 . - 0 ID=cds-TGD41037.1;Parent=gene-C9F07_30535;Dbxref=NCBI_GP:TGD41037.1;Name=TGD41037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454885.1;locus_tag=C9F07_30535;partial=true;product=type VI secretion system protein TssL;protein_id=TGD41037.1;start_range=.,1;transl_table=11 PYKI01003042.1 Genbank pseudogene 423 587 . - . ID=gene-C9F07_30540;Name=C9F07_30540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30540;pseudo=true PYKI01003042.1 Protein Homology CDS 423 587 . - 0 ID=cds-C9F07_30540;Parent=gene-C9F07_30540;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454884.1;locus_tag=C9F07_30540;product=type VI secretion system baseplate subunit TssK;pseudo=true;transl_table=11 ##sequence-region PYKI01000858.1 1 630 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000858.1 Genbank region 1 630 . + . ID=PYKI01000858.1:1..630;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000858.1 Genbank gene 1 630 . - . ID=gene-C9F07_07850;Name=C9F07_07850;end_range=630,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07850;partial=true;start_range=.,1 PYKI01000858.1 Protein Homology CDS 1 630 . - 2 ID=cds-TGE05870.1;Parent=gene-C9F07_07850;Dbxref=NCBI_GP:TGE05870.1;Name=TGE05870.1;end_range=630,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=C9F07_07850;partial=true;product=thymidylate synthase;protein_id=TGE05870.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003508.1 1 3263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003508.1 Genbank region 1 3263 . + . ID=PYKI01003508.1:1..3263;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003508.1 Genbank pseudogene 1 339 . - . ID=gene-C9F07_35365;Name=C9F07_35365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35365;pseudo=true PYKI01003508.1 Protein Homology CDS 1 339 . - 0 ID=cds-C9F07_35365;Parent=gene-C9F07_35365;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458814.1;locus_tag=C9F07_35365;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01003508.1 Genbank gene 523 852 . + . ID=gene-C9F07_35370;Name=C9F07_35370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35370 PYKI01003508.1 Protein Homology CDS 523 852 . + 0 ID=cds-TGD31880.1;Parent=gene-C9F07_35370;Dbxref=NCBI_GP:TGD31880.1;Name=TGD31880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=C9F07_35370;product=biofilm peroxide resistance protein BsmA;protein_id=TGD31880.1;transl_table=11 PYKI01003508.1 Genbank gene 938 1258 . + . ID=gene-C9F07_35375;Name=C9F07_35375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35375 PYKI01003508.1 Protein Homology CDS 938 1258 . + 0 ID=cds-TGD31881.1;Parent=gene-C9F07_35375;Dbxref=NCBI_GP:TGD31881.1;Name=TGD31881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463239.1;locus_tag=C9F07_35375;product=DUF1471 domain-containing protein;protein_id=TGD31881.1;transl_table=11 PYKI01003508.1 Genbank gene 1303 2925 . - . ID=gene-C9F07_35380;Name=C9F07_35380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35380 PYKI01003508.1 Protein Homology CDS 1303 2925 . - 0 ID=cds-TGD31882.1;Parent=gene-C9F07_35380;Dbxref=NCBI_GP:TGD31882.1;Name=TGD31882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458811.3;locus_tag=C9F07_35380;product=isovaleryl-CoA dehydrogenase;protein_id=TGD31882.1;transl_table=11 PYKI01003508.1 Genbank gene 3010 3263 . - . ID=gene-C9F07_35385;Name=C9F07_35385;end_range=3263,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35385;partial=true PYKI01003508.1 Protein Homology CDS 3010 3263 . - 2 ID=cds-TGD31883.1;Parent=gene-C9F07_35385;Dbxref=NCBI_GP:TGD31883.1;Name=TGD31883.1;end_range=3263,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458810.1;locus_tag=C9F07_35385;partial=true;product=hypothetical protein;protein_id=TGD31883.1;transl_table=11 ##sequence-region PYKI01001521.1 1 630 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001521.1 Genbank region 1 630 . + . ID=PYKI01001521.1:1..630;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001521.1 Genbank gene 58 630 . + . ID=gene-C9F07_14480;Name=C9F07_14480;end_range=630,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14480;partial=true PYKI01001521.1 Protein Homology CDS 58 630 . + 0 ID=cds-TGD76598.1;Parent=gene-C9F07_14480;Dbxref=NCBI_GP:TGD76598.1;Name=TGD76598.1;end_range=630,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=C9F07_14480;partial=true;product=guanylate kinase;protein_id=TGD76598.1;transl_table=11 ##sequence-region PYKI01003290.1 1 630 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003290.1 Genbank region 1 630 . + . ID=PYKI01003290.1:1..630;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003290.1 Genbank pseudogene 23 630 . + . ID=gene-C9F07_33095;Name=C9F07_33095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33095;pseudo=true PYKI01003290.1 Protein Homology CDS 23 630 . + 0 ID=cds-C9F07_33095;Parent=gene-C9F07_33095;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458844.1;locus_tag=C9F07_33095;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001900.1 1 630 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001900.1 Genbank region 1 630 . + . ID=PYKI01001900.1:1..630;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001900.1 Genbank gene 1 630 . - . ID=gene-C9F07_18305;Name=C9F07_18305;end_range=630,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18305;partial=true;start_range=.,1 PYKI01001900.1 Protein Homology CDS 1 630 . - 1 ID=cds-TGD61552.1;Parent=gene-C9F07_18305;Dbxref=NCBI_GP:TGD61552.1;Name=TGD61552.1;end_range=630,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=C9F07_18305;partial=true;product=transporter;protein_id=TGD61552.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001283.1 1 630 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001283.1 Genbank region 1 630 . + . ID=PYKI01001283.1:1..630;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001283.1 Genbank gene 1 630 . - . ID=gene-C9F07_12030;Name=C9F07_12030;end_range=630,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12030;partial=true;start_range=.,1 PYKI01001283.1 Protein Homology CDS 1 630 . - 1 ID=cds-TGD87748.1;Parent=gene-C9F07_12030;Dbxref=NCBI_GP:TGD87748.1;Name=TGD87748.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;end_range=630,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=C9F07_12030;partial=true;product=transketolase;protein_id=TGD87748.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001057.1 1 629 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001057.1 Genbank region 1 629 . + . ID=PYKI01001057.1:1..629;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001057.1 Genbank pseudogene 18 629 . - . ID=gene-C9F07_09765;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=pseudogene;locus_tag=C9F07_09765;pseudo=true PYKI01001057.1 Protein Homology CDS 18 629 . - 0 ID=cds-C9F07_09765;Parent=gene-C9F07_09765;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458311.1;locus_tag=C9F07_09765;product=inner membrane protein YhjD;pseudo=true;transl_table=11 ##sequence-region PYKI01002791.1 1 629 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002791.1 Genbank region 1 629 . + . ID=PYKI01002791.1:1..629;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002791.1 Genbank gene 1 366 . - . ID=gene-C9F07_27905;Name=C9F07_27905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27905;partial=true;start_range=.,1 PYKI01002791.1 Protein Homology CDS 1 366 . - 0 ID=cds-TGD46068.1;Parent=gene-C9F07_27905;Dbxref=NCBI_GP:TGD46068.1;Name=TGD46068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455350.1;locus_tag=C9F07_27905;partial=true;product=cardiolipin synthase B;protein_id=TGD46068.1;start_range=.,1;transl_table=11 PYKI01002791.1 Genbank gene 363 629 . - . ID=gene-C9F07_27910;Name=C9F07_27910;end_range=629,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27910;partial=true PYKI01002791.1 Protein Homology CDS 363 629 . - 0 ID=cds-TGD46069.1;Parent=gene-C9F07_27910;Dbxref=NCBI_GP:TGD46069.1;Name=TGD46069.1;end_range=629,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=C9F07_27910;partial=true;product=hypothetical protein;protein_id=TGD46069.1;transl_table=11 ##sequence-region PYKI01001511.1 1 581 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001511.1 Genbank region 1 581 . + . ID=PYKI01001511.1:1..581;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001511.1 Genbank gene 113 581 . + . ID=gene-C9F07_14415;Name=C9F07_14415;end_range=581,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14415;partial=true PYKI01001511.1 Protein Homology CDS 113 581 . + 0 ID=cds-TGD77195.1;Parent=gene-C9F07_14415;Dbxref=NCBI_GP:TGD77195.1;Name=TGD77195.1;end_range=581,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456890.1;locus_tag=C9F07_14415;partial=true;product=glutathione transferase;protein_id=TGD77195.1;transl_table=11 ##sequence-region PYKI01003032.1 1 628 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003032.1 Genbank region 1 628 . + . ID=PYKI01003032.1:1..628;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003032.1 Genbank pseudogene 77 298 . + . ID=gene-C9F07_30435;Name=C9F07_30435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30435;pseudo=true PYKI01003032.1 Protein Homology CDS 77 298 . + 0 ID=cds-C9F07_30435;Parent=gene-C9F07_30435;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456254.1;locus_tag=C9F07_30435;product=ABC transporter permease;pseudo=true;transl_table=11 PYKI01003032.1 Genbank pseudogene 288 563 . + . ID=gene-C9F07_30440;Name=C9F07_30440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30440;pseudo=true PYKI01003032.1 Protein Homology CDS 288 563 . + 0 ID=cds-C9F07_30440;Parent=gene-C9F07_30440;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456253.1;locus_tag=C9F07_30440;product=peptide ABC transporter permease;pseudo=true;transl_table=11 ##sequence-region PYKI01000189.1 1 627 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000189.1 Genbank region 1 627 . + . ID=PYKI01000189.1:1..627;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000189.1 Genbank pseudogene 36 290 . - . ID=gene-C9F07_01275;Name=C9F07_01275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01275;pseudo=true PYKI01000189.1 Protein Homology CDS 36 290 . - 0 ID=cds-C9F07_01275;Parent=gene-C9F07_01275;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050820.1;locus_tag=C9F07_01275;product=lysis protein;pseudo=true;transl_table=11 PYKI01000189.1 Genbank gene 287 627 . - . ID=gene-C9F07_01280;Name=C9F07_01280;end_range=627,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01280;partial=true PYKI01000189.1 Protein Homology CDS 287 627 . - 2 ID=cds-TGE30036.1;Parent=gene-C9F07_01280;Dbxref=NCBI_GP:TGE30036.1;Name=TGE30036.1;end_range=627,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455520.1;locus_tag=C9F07_01280;partial=true;product=endolysin;protein_id=TGE30036.1;transl_table=11 ##sequence-region PYKI01002695.1 1 3263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002695.1 Genbank region 1 3263 . + . ID=PYKI01002695.1:1..3263;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002695.1 Genbank gene 1 704 . + . ID=gene-C9F07_26875;Name=C9F07_26875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26875;partial=true;start_range=.,1 PYKI01002695.1 Protein Homology CDS 1 704 . + 2 ID=cds-TGD48256.1;Parent=gene-C9F07_26875;Dbxref=NCBI_GP:TGD48256.1;Name=TGD48256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459427.1;locus_tag=C9F07_26875;partial=true;product=phosphonoacetaldehyde hydrolase;protein_id=TGD48256.1;start_range=.,1;transl_table=11 PYKI01002695.1 Genbank gene 801 1391 . - . ID=gene-C9F07_26880;Name=C9F07_26880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26880 PYKI01002695.1 Protein Homology CDS 801 1391 . - 0 ID=cds-TGD48257.1;Parent=gene-C9F07_26880;Dbxref=NCBI_GP:TGD48257.1;Name=TGD48257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455027.1;locus_tag=C9F07_26880;product=protein deglycase YajL;protein_id=TGD48257.1;transl_table=11 PYKI01002695.1 Genbank gene 1354 2265 . - . ID=gene-C9F07_26885;Name=C9F07_26885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26885 PYKI01002695.1 Protein Homology CDS 1354 2265 . - 0 ID=cds-TGD48258.1;Parent=gene-C9F07_26885;Dbxref=NCBI_GP:TGD48258.1;Name=TGD48258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=C9F07_26885;product=2-dehydropantoate 2-reductase;protein_id=TGD48258.1;transl_table=11 PYKI01002695.1 Genbank gene 2373 2882 . + . ID=gene-C9F07_26890;Name=C9F07_26890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26890 PYKI01002695.1 Protein Homology CDS 2373 2882 . + 0 ID=cds-TGD48259.1;Parent=gene-C9F07_26890;Dbxref=NCBI_GP:TGD48259.1;Name=TGD48259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459430.3;locus_tag=C9F07_26890;product=YajQ family cyclic di-GMP-binding protein;protein_id=TGD48259.1;transl_table=11 PYKI01002695.1 Genbank gene 2929 3263 . - . ID=gene-C9F07_26895;Name=C9F07_26895;end_range=3263,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26895;partial=true PYKI01002695.1 Protein Homology CDS 2929 3263 . - 2 ID=cds-TGD48260.1;Parent=gene-C9F07_26895;Dbxref=NCBI_GP:TGD48260.1;Name=TGD48260.1;end_range=3263,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455030.1;locus_tag=C9F07_26895;partial=true;product=MFS transporter;protein_id=TGD48260.1;transl_table=11 ##sequence-region PYKI01001780.1 1 626 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001780.1 Genbank region 1 626 . + . ID=PYKI01001780.1:1..626;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001780.1 Genbank gene 1 624 . - . ID=gene-C9F07_17085;Name=C9F07_17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17085;partial=true;start_range=.,1 PYKI01001780.1 Protein Homology CDS 1 624 . - 0 ID=cds-TGD66830.1;Parent=gene-C9F07_17085;Dbxref=NCBI_GP:TGD66830.1;Name=TGD66830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764807.1;locus_tag=C9F07_17085;partial=true;product=HAD family hydrolase;protein_id=TGD66830.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000881.1 1 626 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000881.1 Genbank region 1 626 . + . ID=PYKI01000881.1:1..626;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000881.1 Genbank gene 1 626 . - . ID=gene-C9F07_08075;Name=C9F07_08075;end_range=626,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08075;partial=true;start_range=.,1 PYKI01000881.1 Protein Homology CDS 1 626 . - 1 ID=cds-TGE04427.1;Parent=gene-C9F07_08075;Dbxref=NCBI_GP:TGE04427.1;Name=TGE04427.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;end_range=626,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=C9F07_08075;partial=true;product=multidrug transporter subunit MdtC;protein_id=TGE04427.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002174.1 1 626 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002174.1 Genbank region 1 626 . + . ID=PYKI01002174.1:1..626;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002174.1 Genbank gene 111 626 . + . ID=gene-C9F07_21115;Name=C9F07_21115;end_range=626,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21115;partial=true PYKI01002174.1 Protein Homology CDS 111 626 . + 0 ID=cds-TGD56986.1;Parent=gene-C9F07_21115;Dbxref=NCBI_GP:TGD56986.1;Name=TGD56986.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;end_range=626,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457596.1;locus_tag=C9F07_21115;partial=true;product=undecaprenyl-diphosphatase;protein_id=TGD56986.1;transl_table=11 ##sequence-region PYKI01001917.1 1 625 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001917.1 Genbank region 1 625 . + . ID=PYKI01001917.1:1..625;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001917.1 Genbank gene 1 625 . - . ID=gene-C9F07_18460;Name=C9F07_18460;end_range=625,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18460;partial=true;start_range=.,1 PYKI01001917.1 Protein Homology CDS 1 625 . - 1 ID=cds-TGD61111.1;Parent=gene-C9F07_18460;Dbxref=NCBI_GP:TGD61111.1;Name=TGD61111.1;Note=enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation;end_range=625,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457832.1;locus_tag=C9F07_18460;partial=true;product=ATP-dependent RNA helicase RhlB;protein_id=TGD61111.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000316.1 1 625 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000316.1 Genbank region 1 625 . + . ID=PYKI01000316.1:1..625;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000316.1 Genbank gene 1 527 . - . ID=gene-C9F07_02165;Name=C9F07_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02165;partial=true;start_range=.,1 PYKI01000316.1 Protein Homology CDS 1 527 . - 0 ID=cds-TGE26889.1;Parent=gene-C9F07_02165;Dbxref=NCBI_GP:TGE26889.1;Name=TGE26889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456289.1;locus_tag=C9F07_02165;partial=true;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=TGE26889.1;start_range=.,1;transl_table=11 PYKI01000316.1 Genbank gene 524 625 . - . ID=gene-C9F07_02170;Name=lolB;end_range=625,.;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=C9F07_02170;partial=true PYKI01000316.1 Protein Homology CDS 524 625 . - 0 ID=cds-TGE26890.1;Parent=gene-C9F07_02170;Dbxref=NCBI_GP:TGE26890.1;Name=TGE26890.1;Note=Incorporates lipoproteins in the outer membrane after they are released by the LolA protein;end_range=625,.;gbkey=CDS;gene=lolB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456288.1;locus_tag=C9F07_02170;partial=true;product=lipoprotein localization factor LolB;protein_id=TGE26890.1;transl_table=11 ##sequence-region PYKI01001284.1 1 624 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001284.1 Genbank region 1 624 . + . ID=PYKI01001284.1:1..624;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001284.1 Genbank gene 1 530 . - . ID=gene-C9F07_12035;Name=C9F07_12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12035;partial=true;start_range=.,1 PYKI01001284.1 Protein Homology CDS 1 530 . - 0 ID=cds-TGD87723.1;Parent=gene-C9F07_12035;Dbxref=NCBI_GP:TGD87723.1;Name=TGD87723.1;Note=Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=C9F07_12035;partial=true;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=TGD87723.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000814.1 1 624 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000814.1 Genbank region 1 624 . + . ID=PYKI01000814.1:1..624;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000814.1 Genbank gene 1 399 . - . ID=gene-C9F07_07365;Name=C9F07_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07365;partial=true;start_range=.,1 PYKI01000814.1 Protein Homology CDS 1 399 . - 0 ID=cds-TGE07517.1;Parent=gene-C9F07_07365;Dbxref=NCBI_GP:TGE07517.1;Name=TGE07517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=C9F07_07365;partial=true;product=D-threonate kinase;protein_id=TGE07517.1;start_range=.,1;transl_table=11 PYKI01000814.1 Genbank gene 396 624 . - . ID=gene-C9F07_07370;Name=C9F07_07370;end_range=624,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07370;partial=true PYKI01000814.1 Protein Homology CDS 396 624 . - 1 ID=cds-TGE07518.1;Parent=gene-C9F07_07370;Dbxref=NCBI_GP:TGE07518.1;Name=TGE07518.1;end_range=624,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454774.1;locus_tag=C9F07_07370;partial=true;product=2-keto-3-deoxygluconate permease;protein_id=TGE07518.1;transl_table=11 ##sequence-region PYKI01001192.1 1 623 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001192.1 Genbank region 1 623 . + . ID=PYKI01001192.1:1..623;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001192.1 Genbank pseudogene 52 276 . - . ID=gene-C9F07_11150;Name=C9F07_11150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11150;pseudo=true PYKI01001192.1 Protein Homology CDS 52 276 . - 0 ID=cds-C9F07_11150;Parent=gene-C9F07_11150;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=C9F07_11150;product=MFS transporter;pseudo=true;transl_table=11 PYKI01001192.1 Genbank gene 309 623 . - . ID=gene-C9F07_11155;Name=C9F07_11155;end_range=623,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11155;partial=true PYKI01001192.1 Protein Homology CDS 309 623 . - 0 ID=cds-TGD91907.1;Parent=gene-C9F07_11155;Dbxref=NCBI_GP:TGD91907.1;Name=TGD91907.1;end_range=623,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456756.1;locus_tag=C9F07_11155;partial=true;product=phosphoserine phosphatase SerB;protein_id=TGD91907.1;transl_table=11 ##sequence-region PYKI01002870.1 1 3261 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002870.1 Genbank region 1 3261 . + . ID=PYKI01002870.1:1..3261;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002870.1 Genbank gene 45 635 . - . ID=gene-C9F07_28745;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=C9F07_28745 PYKI01002870.1 Protein Homology CDS 45 635 . - 0 ID=cds-TGD44509.1;Parent=gene-C9F07_28745;Dbxref=NCBI_GP:TGD44509.1;Name=TGD44509.1;gbkey=CDS;gene=hisH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=C9F07_28745;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=TGD44509.1;transl_table=11 PYKI01002870.1 Genbank gene 635 1702 . - . ID=gene-C9F07_28750;Name=C9F07_28750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28750 PYKI01002870.1 Protein Homology CDS 635 1702 . - 0 ID=cds-TGD44510.1;Parent=gene-C9F07_28750;Dbxref=NCBI_GP:TGD44510.1;Name=TGD44510.1;Note=catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128082.1;locus_tag=C9F07_28750;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=TGD44510.1;transl_table=11 PYKI01002870.1 Genbank gene 1699 2778 . - . ID=gene-C9F07_28755;Name=C9F07_28755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28755 PYKI01002870.1 Protein Homology CDS 1699 2778 . - 0 ID=cds-TGD44511.1;Parent=gene-C9F07_28755;Dbxref=NCBI_GP:TGD44511.1;Name=TGD44511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=C9F07_28755;product=histidinol-phosphate transaminase;protein_id=TGD44511.1;transl_table=11 PYKI01002870.1 Genbank pseudogene 2775 3261 . - . ID=gene-C9F07_28760;Name=C9F07_28760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28760;pseudo=true PYKI01002870.1 Protein Homology CDS 2775 3261 . - 1 ID=cds-C9F07_28760;Parent=gene-C9F07_28760;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=C9F07_28760;product=histidinol dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01001226.1 1 623 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001226.1 Genbank region 1 623 . + . ID=PYKI01001226.1:1..623;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001226.1 Genbank gene 1 363 . + . ID=gene-C9F07_11470;Name=C9F07_11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11470;partial=true;start_range=.,1 PYKI01001226.1 Protein Homology CDS 1 363 . + 0 ID=cds-TGD91092.1;Parent=gene-C9F07_11470;Dbxref=NCBI_GP:TGD91092.1;Name=TGD91092.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=C9F07_11470;partial=true;product=F0F1 ATP synthase subunit A;protein_id=TGD91092.1;start_range=.,1;transl_table=11 PYKI01001226.1 Genbank gene 410 623 . + . ID=gene-C9F07_11475;Name=C9F07_11475;end_range=623,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11475;partial=true PYKI01001226.1 Protein Homology CDS 410 623 . + 0 ID=cds-TGD91093.1;Parent=gene-C9F07_11475;Dbxref=NCBI_GP:TGD91093.1;Name=TGD91093.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0;end_range=623,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312706.1;locus_tag=C9F07_11475;partial=true;product=ATP F0F1 synthase subunit C;protein_id=TGD91093.1;transl_table=11 ##sequence-region PYKI01000605.1 1 622 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000605.1 Genbank region 1 622 . + . ID=PYKI01000605.1:1..622;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000605.1 Genbank pseudogene 1 561 . - . ID=gene-C9F07_05170;Name=C9F07_05170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05170;pseudo=true PYKI01000605.1 Protein Homology CDS 1 561 . - 0 ID=cds-C9F07_05170;Parent=gene-C9F07_05170;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457725.1;locus_tag=C9F07_05170;product=serine endoprotease DegQ;pseudo=true;transl_table=11 ##sequence-region PYKI01000870.1 1 622 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000870.1 Genbank region 1 622 . + . ID=PYKI01000870.1:1..622;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000870.1 Genbank gene 1 503 . - . ID=gene-C9F07_07995;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=C9F07_07995;partial=true;start_range=.,1 PYKI01000870.1 Protein Homology CDS 1 503 . - 0 ID=cds-TGE05070.1;Parent=gene-C9F07_07995;Dbxref=NCBI_GP:TGE05070.1;Name=TGE05070.1;gbkey=CDS;gene=fliP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456540.1;locus_tag=C9F07_07995;partial=true;product=flagellar type III secretion system protein FliP;protein_id=TGE05070.1;start_range=.,1;transl_table=11 PYKI01000870.1 Genbank gene 503 622 . - . ID=gene-C9F07_08000;Name=C9F07_08000;end_range=622,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08000;partial=true PYKI01000870.1 Protein Homology CDS 503 622 . - 0 ID=cds-TGE05069.1;Parent=gene-C9F07_08000;Dbxref=NCBI_GP:TGE05069.1;Name=TGE05069.1;Note=with FlhA%2C FlhB%2C FliP%2C FliQ and FliR is one of the membrane components of the flagellar export apparatus;end_range=622,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456539.1;locus_tag=C9F07_08000;partial=true;product=flagellar biosynthesis protein FliO;protein_id=TGE05069.1;transl_table=11 ##sequence-region PYKI01003386.1 1 621 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003386.1 Genbank region 1 621 . + . ID=PYKI01003386.1:1..621;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003386.1 Genbank pseudogene 28 147 . - . ID=gene-C9F07_34075;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=pseudogene;locus_tag=C9F07_34075;pseudo=true PYKI01003386.1 Protein Homology CDS 28 147 . - 0 ID=cds-C9F07_34075;Parent=gene-C9F07_34075;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458293.1;locus_tag=C9F07_34075;product=dipeptide ABC transporter ATP-binding protein;pseudo=true;transl_table=11 PYKI01003386.1 Genbank gene 144 621 . - . ID=gene-C9F07_34080;Name=dppD;end_range=621,.;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=C9F07_34080;partial=true PYKI01003386.1 Protein Homology CDS 144 621 . - 1 ID=cds-TGD34277.1;Parent=gene-C9F07_34080;Dbxref=NCBI_GP:TGD34277.1;Name=TGD34277.1;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;end_range=621,.;gbkey=CDS;gene=dppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=C9F07_34080;partial=true;product=dipeptide ABC transporter ATP-binding protein DppD;protein_id=TGD34277.1;transl_table=11 ##sequence-region PYKI01003553.1 1 620 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003553.1 Genbank region 1 620 . + . ID=PYKI01003553.1:1..620;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003553.1 Genbank gene 62 620 . + . ID=gene-C9F07_35875;Name=C9F07_35875;end_range=620,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35875;partial=true PYKI01003553.1 Protein Homology CDS 62 620 . + 0 ID=cds-TGD30708.1;Parent=gene-C9F07_35875;Dbxref=NCBI_GP:TGD30708.1;Name=TGD30708.1;end_range=620,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=C9F07_35875;partial=true;product=hypothetical protein;protein_id=TGD30708.1;transl_table=11 ##sequence-region PYKI01002389.1 1 620 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002389.1 Genbank region 1 620 . + . ID=PYKI01002389.1:1..620;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002389.1 Genbank pseudogene 71 217 . - . ID=gene-C9F07_23510;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=pseudogene;locus_tag=C9F07_23510;pseudo=true PYKI01002389.1 Protein Homology CDS 71 217 . - 0 ID=cds-C9F07_23510;Parent=gene-C9F07_23510;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458338.1;locus_tag=C9F07_23510;product=4'-phosphopantetheinyl transferase AcpT;pseudo=true;transl_table=11 PYKI01002389.1 Genbank gene 269 620 . - . ID=gene-C9F07_23515;Name=C9F07_23515;end_range=620,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23515;partial=true PYKI01002389.1 Protein Homology CDS 269 620 . - 1 ID=cds-TGD52216.1;Parent=gene-C9F07_23515;Dbxref=NCBI_GP:TGD52216.1;Name=TGD52216.1;end_range=620,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458339.1;locus_tag=C9F07_23515;partial=true;product=permease;protein_id=TGD52216.1;transl_table=11 ##sequence-region PYKI01002986.1 1 620 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002986.1 Genbank region 1 620 . + . ID=PYKI01002986.1:1..620;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002986.1 Genbank gene 1 350 . - . ID=gene-C9F07_29985;Name=C9F07_29985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29985;partial=true;start_range=.,1 PYKI01002986.1 Protein Homology CDS 1 350 . - 0 ID=cds-TGD41395.1;Parent=gene-C9F07_29985;Dbxref=NCBI_GP:TGD41395.1;Name=TGD41395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417530.2;locus_tag=C9F07_29985;partial=true;product=hypothetical protein;protein_id=TGD41395.1;start_range=.,1;transl_table=11 PYKI01002986.1 Genbank gene 457 620 . + . ID=gene-C9F07_29990;Name=C9F07_29990;end_range=620,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29990;partial=true PYKI01002986.1 Protein Homology CDS 457 620 . + 0 ID=cds-TGD41396.1;Parent=gene-C9F07_29990;Dbxref=NCBI_GP:TGD41396.1;Name=TGD41396.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;end_range=620,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457598.1;locus_tag=C9F07_29990;partial=true;product=acyl-phosphate--glycerol-3-phosphate O-acyltransferase;protein_id=TGD41396.1;transl_table=11 ##sequence-region PYKI01002851.1 1 619 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002851.1 Genbank region 1 619 . + . ID=PYKI01002851.1:1..619;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002851.1 Genbank gene 1 619 . - . ID=gene-C9F07_28495;Name=mnmC;end_range=619,.;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;gene_synonym=trmC,yfcK;locus_tag=C9F07_28495;partial=true;start_range=.,1 PYKI01002851.1 Protein Homology CDS 1 619 . - 0 ID=cds-TGD45538.1;Parent=gene-C9F07_28495;Dbxref=NCBI_GP:TGD45538.1;Name=TGD45538.1;Note=5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme;end_range=619,.;gbkey=CDS;gene=mnmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461321.3;locus_tag=C9F07_28495;partial=true;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=TGD45538.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002073.1 1 3241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002073.1 Genbank region 1 3241 . + . ID=PYKI01002073.1:1..3241;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002073.1 Genbank gene 1 358 . - . ID=gene-C9F07_20100;Name=C9F07_20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20100;partial=true;start_range=.,1 PYKI01002073.1 Protein Homology CDS 1 358 . - 0 ID=cds-TGD59326.1;Parent=gene-C9F07_20100;Dbxref=NCBI_GP:TGD59326.1;Name=TGD59326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=C9F07_20100;partial=true;product=copper resistance protein;protein_id=TGD59326.1;start_range=.,1;transl_table=11 PYKI01002073.1 Genbank gene 279 473 . + . ID=gene-C9F07_20105;Name=C9F07_20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20105 PYKI01002073.1 Protein Homology CDS 279 473 . + 0 ID=cds-TGD59321.1;Parent=gene-C9F07_20105;Dbxref=NCBI_GP:TGD59321.1;Name=TGD59321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218966.1;locus_tag=C9F07_20105;product=hypothetical protein;protein_id=TGD59321.1;transl_table=11 PYKI01002073.1 Genbank gene 594 1514 . + . ID=gene-C9F07_20110;Name=C9F07_20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20110 PYKI01002073.1 Protein Homology CDS 594 1514 . + 0 ID=cds-TGD59322.1;Parent=gene-C9F07_20110;Dbxref=NCBI_GP:TGD59322.1;Name=TGD59322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455607.1;locus_tag=C9F07_20110;product=curved DNA-binding protein;protein_id=TGD59322.1;transl_table=11 PYKI01002073.1 Genbank gene 1514 1819 . + . ID=gene-C9F07_20115;Name=C9F07_20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20115 PYKI01002073.1 Protein Homology CDS 1514 1819 . + 0 ID=cds-TGD59323.1;Parent=gene-C9F07_20115;Dbxref=NCBI_GP:TGD59323.1;Name=TGD59323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455606.1;locus_tag=C9F07_20115;product=chaperone modulatory protein CbpM;protein_id=TGD59323.1;transl_table=11 PYKI01002073.1 Genbank gene 1885 2025 . - . ID=gene-C9F07_20120;Name=C9F07_20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20120 PYKI01002073.1 Protein Homology CDS 1885 2025 . - 0 ID=cds-TGD59324.1;Parent=gene-C9F07_20120;Dbxref=NCBI_GP:TGD59324.1;Name=TGD59324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991979.1;locus_tag=C9F07_20120;product=hypothetical protein;protein_id=TGD59324.1;transl_table=11 PYKI01002073.1 Genbank gene 2473 2835 . + . ID=gene-C9F07_20125;Name=C9F07_20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20125 PYKI01002073.1 Protein Homology CDS 2473 2835 . + 0 ID=cds-TGD59325.1;Parent=gene-C9F07_20125;Dbxref=NCBI_GP:TGD59325.1;Name=TGD59325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=C9F07_20125;product=anti-adapter protein IraM;protein_id=TGD59325.1;transl_table=11 ##sequence-region PYKI01000362.1 1 618 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000362.1 Genbank region 1 618 . + . ID=PYKI01000362.1:1..618;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000362.1 Genbank pseudogene 1 598 . - . ID=gene-C9F07_02730;Name=C9F07_02730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02730;pseudo=true PYKI01000362.1 Protein Homology CDS 1 598 . - 0 ID=cds-C9F07_02730;Parent=gene-C9F07_02730;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456738.1;locus_tag=C9F07_02730;product=aromatic acid/H+ symport family MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01003372.1 1 617 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003372.1 Genbank region 1 617 . + . ID=PYKI01003372.1:1..617;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003372.1 Genbank gene 258 617 . + . ID=gene-C9F07_33975;Name=C9F07_33975;end_range=617,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33975;partial=true PYKI01003372.1 Protein Homology CDS 258 617 . + 0 ID=cds-TGD34454.1;Parent=gene-C9F07_33975;Dbxref=NCBI_GP:TGD34454.1;Name=TGD34454.1;end_range=617,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456216.1;locus_tag=C9F07_33975;partial=true;product=NAD(P)H nitroreductase;protein_id=TGD34454.1;transl_table=11 ##sequence-region PYKI01003074.1 1 616 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003074.1 Genbank region 1 616 . + . ID=PYKI01003074.1:1..616;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003074.1 Genbank gene 1 616 . + . ID=gene-C9F07_30820;Name=C9F07_30820;end_range=616,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30820;partial=true;start_range=.,1 PYKI01003074.1 Protein Homology CDS 1 616 . + 1 ID=cds-TGD40439.1;Parent=gene-C9F07_30820;Dbxref=NCBI_GP:TGD40439.1;Name=TGD40439.1;end_range=616,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=C9F07_30820;partial=true;product=L-lactate permease;protein_id=TGD40439.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000612.1 1 616 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000612.1 Genbank region 1 616 . + . ID=PYKI01000612.1:1..616;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000612.1 Genbank pseudogene 61 261 . + . ID=gene-C9F07_05255;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=pseudogene;locus_tag=C9F07_05255;pseudo=true PYKI01000612.1 Protein Homology CDS 61 261 . + 0 ID=cds-C9F07_05255;Parent=gene-C9F07_05255;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=moaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=C9F07_05255;product=cyclic pyranopterin monophosphate synthase MoaC;pseudo=true;transl_table=11 PYKI01000612.1 Genbank gene 248 499 . + . ID=gene-C9F07_05260;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=C9F07_05260 PYKI01000612.1 Protein Homology CDS 248 499 . + 0 ID=cds-TGE13881.1;Parent=gene-C9F07_05260;Dbxref=NCBI_GP:TGE13881.1;Name=TGE13881.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459783.3;locus_tag=C9F07_05260;product=molybdopterin synthase sulfur carrier subunit;protein_id=TGE13881.1;transl_table=11 PYKI01000612.1 Genbank gene 501 616 . + . ID=gene-C9F07_05265;Name=moaE;end_range=616,.;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=C9F07_05265;partial=true PYKI01000612.1 Protein Homology CDS 501 616 . + 0 ID=cds-TGE13882.1;Parent=gene-C9F07_05265;Dbxref=NCBI_GP:TGE13882.1;Name=TGE13882.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;end_range=616,.;gbkey=CDS;gene=moaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455347.1;locus_tag=C9F07_05265;partial=true;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=TGE13882.1;transl_table=11 ##sequence-region PYKI01000431.1 1 615 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000431.1 Genbank region 1 615 . + . ID=PYKI01000431.1:1..615;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000431.1 Genbank gene 1 615 . - . ID=gene-C9F07_03325;Name=C9F07_03325;end_range=615,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03325;partial=true;start_range=.,1 PYKI01000431.1 Protein Homology CDS 1 615 . - 0 ID=cds-TGE20833.1;Parent=gene-C9F07_03325;Dbxref=NCBI_GP:TGE20833.1;Name=TGE20833.1;end_range=615,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280241.1;locus_tag=C9F07_03325;partial=true;product=DUF91 domain-containing protein;protein_id=TGE20833.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002772.1 1 614 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002772.1 Genbank region 1 614 . + . ID=PYKI01002772.1:1..614;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002772.1 Genbank gene 1 614 . + . ID=gene-C9F07_27705;Name=C9F07_27705;end_range=614,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27705;partial=true;start_range=.,1 PYKI01002772.1 Protein Homology CDS 1 614 . + 1 ID=cds-TGD46420.1;Parent=gene-C9F07_27705;Dbxref=NCBI_GP:TGD46420.1;Name=TGD46420.1;end_range=614,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230792.1;locus_tag=C9F07_27705;partial=true;product=type III restriction endonuclease subunit R;protein_id=TGD46420.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000913.1 1 613 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000913.1 Genbank region 1 613 . + . ID=PYKI01000913.1:1..613;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000913.1 Genbank gene 65 613 . - . ID=gene-C9F07_08320;Name=C9F07_08320;end_range=613,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08320;partial=true PYKI01000913.1 Protein Homology CDS 65 613 . - 0 ID=cds-TGE03013.1;Parent=gene-C9F07_08320;Dbxref=NCBI_GP:TGE03013.1;Name=TGE03013.1;end_range=613,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457411.1;locus_tag=C9F07_08320;partial=true;product=arabinose:proton symporter;protein_id=TGE03013.1;transl_table=11 ##sequence-region PYKI01001517.1 1 613 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001517.1 Genbank region 1 613 . + . ID=PYKI01001517.1:1..613;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001517.1 Genbank gene 95 613 . - . ID=gene-C9F07_14460;Name=C9F07_14460;end_range=613,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14460;partial=true PYKI01001517.1 Protein Homology CDS 95 613 . - 0 ID=cds-TGD76810.1;Parent=gene-C9F07_14460;Dbxref=NCBI_GP:TGD76810.1;Name=TGD76810.1;Note=involved in the transport of magnesium and cobalt ions;end_range=613,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455236.1;locus_tag=C9F07_14460;partial=true;product=magnesium/cobalt efflux protein;protein_id=TGD76810.1;transl_table=11 ##sequence-region PYKI01000884.1 1 3239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000884.1 Genbank region 1 3239 . + . ID=PYKI01000884.1:1..3239;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000884.1 Genbank gene 1 553 . - . ID=gene-C9F07_08095;Name=C9F07_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08095;partial=true;start_range=.,1 PYKI01000884.1 Protein Homology CDS 1 553 . - 0 ID=cds-TGE04050.1;Parent=gene-C9F07_08095;Dbxref=NCBI_GP:TGE04050.1;Name=TGE04050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457955.1;locus_tag=C9F07_08095;partial=true;product=TIGR02117 family protein;protein_id=TGE04050.1;start_range=.,1;transl_table=11 PYKI01000884.1 Genbank gene 754 2544 . - . ID=gene-C9F07_08100;Name=C9F07_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08100 PYKI01000884.1 Protein Homology CDS 754 2544 . - 0 ID=cds-TGE04051.1;Parent=gene-C9F07_08100;Dbxref=NCBI_GP:TGE04051.1;Name=TGE04051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=C9F07_08100;product=aryl-sulfate sulfotransferase;protein_id=TGE04051.1;transl_table=11 PYKI01000884.1 Genbank gene 3001 3239 . - . ID=gene-C9F07_08105;Name=C9F07_08105;end_range=3239,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08105;partial=true PYKI01000884.1 Protein Homology CDS 3001 3239 . - 2 ID=cds-TGE04052.1;Parent=gene-C9F07_08105;Dbxref=NCBI_GP:TGE04052.1;Name=TGE04052.1;end_range=3239,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457954.1;locus_tag=C9F07_08105;partial=true;product=met regulon transcriptional regulator MetJ;protein_id=TGE04052.1;transl_table=11 ##sequence-region PYKI01000663.1 1 612 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000663.1 Genbank region 1 612 . + . ID=PYKI01000663.1:1..612;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000663.1 Genbank gene 1 612 . - . ID=gene-C9F07_05775;Name=C9F07_05775;end_range=612,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05775;partial=true;start_range=.,1 PYKI01000663.1 Protein Homology CDS 1 612 . - 1 ID=cds-TGE11909.1;Parent=gene-C9F07_05775;Dbxref=NCBI_GP:TGE11909.1;Name=TGE11909.1;end_range=612,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455824.1;locus_tag=C9F07_05775;partial=true;product=murein tripeptide amidase MpaA;protein_id=TGE11909.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001232.1 1 611 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001232.1 Genbank region 1 611 . + . ID=PYKI01001232.1:1..611;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001232.1 Genbank gene 26 611 . - . ID=gene-C9F07_11520;Name=C9F07_11520;end_range=611,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11520;partial=true PYKI01001232.1 Protein Homology CDS 26 611 . - 1 ID=cds-TGD90981.1;Parent=gene-C9F07_11520;Dbxref=NCBI_GP:TGD90981.1;Name=TGD90981.1;Note=catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;end_range=611,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=C9F07_11520;partial=true;product=leucyl aminopeptidase;protein_id=TGD90981.1;transl_table=11 ##sequence-region PYKI01003053.1 1 610 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003053.1 Genbank region 1 610 . + . ID=PYKI01003053.1:1..610;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003053.1 Genbank gene 33 610 . + . ID=gene-C9F07_30625;Name=C9F07_30625;end_range=610,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30625;partial=true PYKI01003053.1 Protein Homology CDS 33 610 . + 0 ID=cds-TGD40991.1;Parent=gene-C9F07_30625;Dbxref=NCBI_GP:TGD40991.1;Name=TGD40991.1;end_range=610,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458112.1;locus_tag=C9F07_30625;partial=true;product=hypothetical protein;protein_id=TGD40991.1;transl_table=11 ##sequence-region PYKI01002906.1 1 610 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002906.1 Genbank region 1 610 . + . ID=PYKI01002906.1:1..610;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002906.1 Genbank gene 31 610 . + . ID=gene-C9F07_29110;Name=C9F07_29110;end_range=610,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29110;partial=true PYKI01002906.1 Protein Homology CDS 31 610 . + 0 ID=cds-TGD43698.1;Parent=gene-C9F07_29110;Dbxref=NCBI_GP:TGD43698.1;Name=TGD43698.1;end_range=610,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=C9F07_29110;partial=true;product=NAD-dependent protein deacylase;protein_id=TGD43698.1;transl_table=11 ##sequence-region PYKI01001689.1 1 610 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001689.1 Genbank region 1 610 . + . ID=PYKI01001689.1:1..610;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001689.1 Genbank gene 302 610 . - . ID=gene-C9F07_16120;Name=C9F07_16120;end_range=610,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16120;partial=true PYKI01001689.1 Protein Homology CDS 302 610 . - 0 ID=cds-TGD69723.1;Parent=gene-C9F07_16120;Dbxref=NCBI_GP:TGD69723.1;Name=TGD69723.1;end_range=610,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=C9F07_16120;partial=true;product=hypothetical protein;protein_id=TGD69723.1;transl_table=11 ##sequence-region PYKI01000358.1 1 609 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000358.1 Genbank region 1 609 . + . ID=PYKI01000358.1:1..609;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000358.1 Genbank gene 1 609 . + . ID=gene-C9F07_02705;Name=C9F07_02705;end_range=609,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02705;partial=true;start_range=.,1 PYKI01000358.1 Protein Homology CDS 1 609 . + 2 ID=cds-TGE23634.1;Parent=gene-C9F07_02705;Dbxref=NCBI_GP:TGE23634.1;Name=TGE23634.1;end_range=609,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457303.1;locus_tag=C9F07_02705;partial=true;product=LysR family transcriptional regulator;protein_id=TGE23634.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002447.1 1 608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002447.1 Genbank region 1 608 . + . ID=PYKI01002447.1:1..608;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002447.1 Genbank gene 1 608 . - . ID=gene-C9F07_24195;Name=C9F07_24195;end_range=608,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24195;partial=true;start_range=.,1 PYKI01002447.1 Protein Homology CDS 1 608 . - 2 ID=cds-TGD50961.1;Parent=gene-C9F07_24195;Dbxref=NCBI_GP:TGD50961.1;Name=TGD50961.1;end_range=608,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=C9F07_24195;partial=true;product=ATP-dependent RNA helicase HrpA;protein_id=TGD50961.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003276.1 1 608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003276.1 Genbank region 1 608 . + . ID=PYKI01003276.1:1..608;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003276.1 Genbank pseudogene 1 608 . + . ID=gene-C9F07_32960;Name=C9F07_32960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32960;pseudo=true PYKI01003276.1 Protein Homology CDS 1 608 . + 2 ID=cds-C9F07_32960;Parent=gene-C9F07_32960;Note=with SufCD activates cysteine desulfurase SufS%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015584111.1;locus_tag=C9F07_32960;product=Fe-S cluster assembly protein SufB;pseudo=true;transl_table=11 ##sequence-region PYKI01001270.1 1 608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001270.1 Genbank region 1 608 . + . ID=PYKI01001270.1:1..608;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001270.1 Genbank pseudogene 1 526 . + . ID=gene-C9F07_11880;Name=C9F07_11880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11880;pseudo=true PYKI01001270.1 Protein Homology CDS 1 526 . + 1 ID=cds-C9F07_11880;Parent=gene-C9F07_11880;Note=binds fibronectin%3B may be required for intestinal persistence%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461448.1;locus_tag=C9F07_11880;product=fibronectin-binding autotransporter adhesin ShdA;pseudo=true;transl_table=11 ##sequence-region PYKI01002862.1 1 607 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002862.1 Genbank region 1 607 . + . ID=PYKI01002862.1:1..607;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002862.1 Genbank gene 1 158 . + . ID=gene-C9F07_28670;Name=C9F07_28670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28670;partial=true;start_range=.,1 PYKI01002862.1 Protein Homology CDS 1 158 . + 2 ID=cds-TGD44966.1;Parent=gene-C9F07_28670;Dbxref=NCBI_GP:TGD44966.1;Name=TGD44966.1;Note=involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458497.1;locus_tag=C9F07_28670;partial=true;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=TGD44966.1;start_range=.,1;transl_table=11 PYKI01002862.1 Genbank gene 163 607 . + . ID=gene-C9F07_28675;Name=C9F07_28675;end_range=607,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28675;partial=true PYKI01002862.1 Protein Homology CDS 163 607 . + 0 ID=cds-TGD44967.1;Parent=gene-C9F07_28675;Dbxref=NCBI_GP:TGD44967.1;Name=TGD44967.1;end_range=607,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458498.1;locus_tag=C9F07_28675;partial=true;product=shikimate dehydrogenase;protein_id=TGD44967.1;transl_table=11 ##sequence-region PYKI01000815.1 1 3225 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000815.1 Genbank region 1 3225 . + . ID=PYKI01000815.1:1..3225;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000815.1 Genbank gene 493 1530 . + . ID=gene-C9F07_07375;Name=C9F07_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07375 PYKI01000815.1 Protein Homology CDS 493 1530 . + 0 ID=cds-TGE07514.1;Parent=gene-C9F07_07375;Dbxref=NCBI_GP:TGE07514.1;Name=TGE07514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=C9F07_07375;product=oxidoreductase;protein_id=TGE07514.1;transl_table=11 PYKI01000815.1 Genbank gene 1654 2349 . + . ID=gene-C9F07_07380;Name=C9F07_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07380 PYKI01000815.1 Protein Homology CDS 1654 2349 . + 0 ID=cds-TGE07515.1;Parent=gene-C9F07_07380;Dbxref=NCBI_GP:TGE07515.1;Name=TGE07515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004591290.1;locus_tag=C9F07_07380;product=pirin family protein;protein_id=TGE07515.1;transl_table=11 PYKI01000815.1 Genbank gene 2479 3225 . + . ID=gene-C9F07_07385;Name=C9F07_07385;end_range=3225,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07385;partial=true PYKI01000815.1 Protein Homology CDS 2479 3225 . + 0 ID=cds-TGE07516.1;Parent=gene-C9F07_07385;Dbxref=NCBI_GP:TGE07516.1;Name=TGE07516.1;end_range=3225,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=C9F07_07385;partial=true;product=transcriptional regulator;protein_id=TGE07516.1;transl_table=11 ##sequence-region PYKI01000283.1 1 606 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000283.1 Genbank region 1 606 . + . ID=PYKI01000283.1:1..606;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000283.1 Genbank pseudogene 67 606 . - . ID=gene-C9F07_01835;Name=C9F07_01835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01835;pseudo=true PYKI01000283.1 Protein Homology CDS 67 606 . - 0 ID=cds-C9F07_01835;Parent=gene-C9F07_01835;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456836.1;locus_tag=C9F07_01835;product=competence/damage-inducible protein A;pseudo=true;transl_table=11 ##sequence-region PYKI01000439.1 1 606 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000439.1 Genbank region 1 606 . + . ID=PYKI01000439.1:1..606;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000439.1 Genbank gene 1 606 . + . ID=gene-C9F07_03375;Name=C9F07_03375;end_range=606,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03375;partial=true;start_range=.,1 PYKI01000439.1 Protein Homology CDS 1 606 . + 0 ID=cds-TGE20825.1;Parent=gene-C9F07_03375;Dbxref=NCBI_GP:TGE20825.1;Name=TGE20825.1;end_range=606,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=C9F07_03375;partial=true;product=transcriptional regulator;protein_id=TGE20825.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000029.1 1 606 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000029.1 Genbank region 1 606 . + . ID=PYKI01000029.1:1..606;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000029.1 Genbank gene 1 606 . + . ID=gene-C9F07_00170;Name=C9F07_00170;end_range=606,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00170;partial=true;start_range=.,1 PYKI01000029.1 Protein Homology CDS 1 606 . + 1 ID=cds-TGE30203.1;Parent=gene-C9F07_00170;Dbxref=NCBI_GP:TGE30203.1;Name=TGE30203.1;end_range=606,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456593.1;locus_tag=C9F07_00170;partial=true;product=hypothetical protein;protein_id=TGE30203.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000405.1 1 605 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000405.1 Genbank region 1 605 . + . ID=PYKI01000405.1:1..605;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000405.1 Genbank gene 1 605 . + . ID=gene-C9F07_03100;Name=C9F07_03100;end_range=605,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03100;partial=true;start_range=.,1 PYKI01000405.1 Protein Homology CDS 1 605 . + 2 ID=cds-TGE21190.1;Parent=gene-C9F07_03100;Dbxref=NCBI_GP:TGE21190.1;Name=TGE21190.1;end_range=605,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455349.1;locus_tag=C9F07_03100;partial=true;product=hypothetical protein;protein_id=TGE21190.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003569.1 1 604 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003569.1 Genbank region 1 604 . + . ID=PYKI01003569.1:1..604;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003569.1 Genbank gene 1 223 . + . ID=gene-C9F07_36040;Name=C9F07_36040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36040;partial=true;start_range=.,1 PYKI01003569.1 Protein Homology CDS 1 223 . + 1 ID=cds-TGD30317.1;Parent=gene-C9F07_36040;Dbxref=NCBI_GP:TGD30317.1;Name=TGD30317.1;Note=constitutive%3B catalyzes the formation of cadaverine from lysine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454842.1;locus_tag=C9F07_36040;partial=true;product=lysine decarboxylase LdcC;protein_id=TGD30317.1;start_range=.,1;transl_table=11 PYKI01003569.1 Genbank gene 279 604 . + . ID=gene-C9F07_36045;Name=C9F07_36045;end_range=604,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36045;partial=true PYKI01003569.1 Protein Homology CDS 279 604 . + 0 ID=cds-TGD30318.1;Parent=gene-C9F07_36045;Dbxref=NCBI_GP:TGD30318.1;Name=TGD30318.1;end_range=604,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=C9F07_36045;partial=true;product=VOC family protein;protein_id=TGD30318.1;transl_table=11 ##sequence-region PYKI01001985.1 1 603 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001985.1 Genbank region 1 603 . + . ID=PYKI01001985.1:1..603;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001985.1 Genbank gene 1 603 . - . ID=gene-C9F07_19145;Name=C9F07_19145;end_range=603,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19145;partial=true;start_range=.,1 PYKI01001985.1 Protein Homology CDS 1 603 . - 2 ID=cds-TGD60226.1;Parent=gene-C9F07_19145;Dbxref=NCBI_GP:TGD60226.1;Name=TGD60226.1;end_range=603,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=C9F07_19145;partial=true;product=hypothetical protein;protein_id=TGD60226.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002173.1 1 603 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002173.1 Genbank region 1 603 . + . ID=PYKI01002173.1:1..603;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002173.1 Genbank gene 1 603 . - . ID=gene-C9F07_21110;Name=C9F07_21110;end_range=603,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21110;partial=true;start_range=.,1 PYKI01002173.1 Protein Homology CDS 1 603 . - 2 ID=cds-TGD56988.1;Parent=gene-C9F07_21110;Dbxref=NCBI_GP:TGD56988.1;Name=TGD56988.1;end_range=603,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=C9F07_21110;partial=true;product=maltose ABC transporter permease MalF;protein_id=TGD56988.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000093.1 1 603 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000093.1 Genbank region 1 603 . + . ID=PYKI01000093.1:1..603;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000093.1 Genbank gene 1 125 . - . ID=gene-C9F07_00600;Name=C9F07_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00600;partial=true;start_range=.,1 PYKI01000093.1 Protein Homology CDS 1 125 . - 0 ID=cds-TGE30142.1;Parent=gene-C9F07_00600;Dbxref=NCBI_GP:TGE30142.1;Name=TGE30142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=C9F07_00600;partial=true;product=DUF2556 domain-containing protein;protein_id=TGE30142.1;start_range=.,1;transl_table=11 PYKI01000093.1 Genbank gene 208 603 . - . ID=gene-C9F07_00605;Name=C9F07_00605;end_range=603,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00605;partial=true PYKI01000093.1 Protein Homology CDS 208 603 . - 0 ID=cds-TGE30143.1;Parent=gene-C9F07_00605;Dbxref=NCBI_GP:TGE30143.1;Name=TGE30143.1;end_range=603,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457762.1;locus_tag=C9F07_00605;partial=true;product=adenine-specific DNA-methyltransferase;protein_id=TGE30143.1;transl_table=11 ##sequence-region PYKI01002055.1 1 3217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002055.1 Genbank region 1 3217 . + . ID=PYKI01002055.1:1..3217;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002055.1 Genbank pseudogene 71 382 . - . ID=gene-C9F07_19900;Name=C9F07_19900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19900;pseudo=true PYKI01002055.1 Protein Homology CDS 71 382 . - 0 ID=cds-C9F07_19900;Parent=gene-C9F07_19900;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=C9F07_19900;product=GMP/IMP nucleotidase;pseudo=true;transl_table=11 PYKI01002055.1 Genbank pseudogene 447 2579 . - . ID=gene-C9F07_19905;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=pseudogene;locus_tag=C9F07_19905;pseudo=true PYKI01002055.1 Protein Homology CDS 447 2579 . - 0 ID=cds-C9F07_19905;Parent=gene-C9F07_19905;Note=internal stop;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458409.1;locus_tag=C9F07_19905;product=intracellular growth attenuator protein IgaA;pseudo=true;transl_table=11 PYKI01002055.1 Genbank pseudogene 2869 3192 . + . ID=gene-C9F07_19910;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=pseudogene;locus_tag=C9F07_19910;pseudo=true PYKI01002055.1 Protein Homology CDS 2869 3192 . + 0 ID=cds-C9F07_19910;Parent=gene-C9F07_19910;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=nudE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458410.3;locus_tag=C9F07_19910;product=ADP compounds hydrolase NudE;pseudo=true;transl_table=11 ##sequence-region PYKI01001482.1 1 602 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001482.1 Genbank region 1 602 . + . ID=PYKI01001482.1:1..602;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001482.1 Genbank pseudogene 1 518 . - . ID=gene-C9F07_14075;Name=C9F07_14075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14075;pseudo=true PYKI01001482.1 Protein Homology CDS 1 518 . - 0 ID=cds-C9F07_14075;Parent=gene-C9F07_14075;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=C9F07_14075;product=DNA polymerase III subunit gamma/tau;pseudo=true;transl_table=11 ##sequence-region PYKI01002585.1 1 602 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002585.1 Genbank region 1 602 . + . ID=PYKI01002585.1:1..602;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002585.1 Genbank gene 131 602 . + . ID=gene-C9F07_25655;Name=C9F07_25655;end_range=602,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25655;partial=true PYKI01002585.1 Protein Homology CDS 131 602 . + 0 ID=cds-TGD49713.1;Parent=gene-C9F07_25655;Dbxref=NCBI_GP:TGD49713.1;Name=TGD49713.1;end_range=602,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=C9F07_25655;partial=true;product=ABC transporter permease;protein_id=TGD49713.1;transl_table=11 ##sequence-region PYKI01000421.1 1 602 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000421.1 Genbank region 1 602 . + . ID=PYKI01000421.1:1..602;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000421.1 Genbank gene 4 602 . + . ID=gene-C9F07_03250;Name=metQ;end_range=602,.;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=C9F07_03250;partial=true PYKI01000421.1 Protein Homology CDS 4 602 . + 0 ID=cds-TGE20861.1;Parent=gene-C9F07_03250;Dbxref=NCBI_GP:TGE20861.1;Name=TGE20861.1;end_range=602,.;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=C9F07_03250;partial=true;product=methionine ABC transporter substrate-binding protein MetQ;protein_id=TGE20861.1;transl_table=11 ##sequence-region PYKI01002450.1 1 601 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002450.1 Genbank region 1 601 . + . ID=PYKI01002450.1:1..601;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002450.1 Genbank gene 10 601 . - . ID=gene-C9F07_24215;Name=C9F07_24215;end_range=601,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24215;partial=true PYKI01002450.1 Protein Homology CDS 10 601 . - 1 ID=cds-TGD50902.1;Parent=gene-C9F07_24215;Dbxref=NCBI_GP:TGD50902.1;Name=TGD50902.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;end_range=601,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=C9F07_24215;partial=true;product=ATP-dependent DNA helicase Rep;protein_id=TGD50902.1;transl_table=11 ##sequence-region PYKI01002184.1 1 601 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002184.1 Genbank region 1 601 . + . ID=PYKI01002184.1:1..601;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002184.1 Genbank pseudogene 1 514 . + . ID=gene-C9F07_21220;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=pseudogene;locus_tag=C9F07_21220;pseudo=true PYKI01002184.1 Protein Homology CDS 1 514 . + 1 ID=cds-C9F07_21220;Parent=gene-C9F07_21220;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=aceF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454767.1;locus_tag=C9F07_21220;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01000391.1 1 601 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000391.1 Genbank region 1 601 . + . ID=PYKI01000391.1:1..601;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000391.1 Genbank pseudogene 62 601 . + . ID=gene-C9F07_02960;Name=C9F07_02960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02960;pseudo=true PYKI01000391.1 Protein Homology CDS 62 601 . + 0 ID=cds-C9F07_02960;Parent=gene-C9F07_02960;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458567.1;locus_tag=C9F07_02960;product=Na+/H+ antiporter;pseudo=true;transl_table=11 ##sequence-region PYKI01001201.1 1 600 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001201.1 Genbank region 1 600 . + . ID=PYKI01001201.1:1..600;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001201.1 Genbank gene 1 335 . + . ID=gene-C9F07_11245;Name=C9F07_11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11245;partial=true;start_range=.,1 PYKI01001201.1 Protein Homology CDS 1 335 . + 2 ID=cds-TGD91594.1;Parent=gene-C9F07_11245;Dbxref=NCBI_GP:TGD91594.1;Name=TGD91594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271805.1;locus_tag=C9F07_11245;partial=true;product=cytoplasmic protein;protein_id=TGD91594.1;start_range=.,1;transl_table=11 PYKI01001201.1 Genbank pseudogene 370 555 . - . ID=gene-C9F07_11250;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=pseudogene;locus_tag=C9F07_11250;pseudo=true PYKI01001201.1 Protein Homology CDS 370 555 . - 0 ID=cds-C9F07_11250;Parent=gene-C9F07_11250;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457151.1;locus_tag=C9F07_11250;product=nucleotide exchange factor GrpE;pseudo=true;transl_table=11 ##sequence-region PYKI01001906.1 1 599 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001906.1 Genbank region 1 599 . + . ID=PYKI01001906.1:1..599;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001906.1 Genbank gene 1 231 . + . ID=gene-C9F07_18360;Name=C9F07_18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18360;partial=true;start_range=.,1 PYKI01001906.1 Protein Homology CDS 1 231 . + 0 ID=cds-TGD61404.1;Parent=gene-C9F07_18360;Dbxref=NCBI_GP:TGD61404.1;Name=TGD61404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459533.1;locus_tag=C9F07_18360;partial=true;product=DUF2145 domain-containing protein;protein_id=TGD61404.1;start_range=.,1;transl_table=11 PYKI01001906.1 Genbank gene 275 599 . - . ID=gene-C9F07_18365;Name=cysS;end_range=599,.;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=C9F07_18365;partial=true PYKI01001906.1 Protein Homology CDS 275 599 . - 1 ID=cds-TGD61405.1;Parent=gene-C9F07_18365;Dbxref=NCBI_GP:TGD61405.1;Name=TGD61405.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;end_range=599,.;gbkey=CDS;gene=cysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=C9F07_18365;partial=true;product=cysteine--tRNA ligase;protein_id=TGD61405.1;transl_table=11 ##sequence-region PYKI01002129.1 1 599 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002129.1 Genbank region 1 599 . + . ID=PYKI01002129.1:1..599;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002129.1 Genbank gene 1 599 . + . ID=gene-C9F07_20605;Name=C9F07_20605;end_range=599,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20605;partial=true;start_range=.,1 PYKI01002129.1 Protein Homology CDS 1 599 . + 0 ID=cds-TGD57852.1;Parent=gene-C9F07_20605;Dbxref=NCBI_GP:TGD57852.1;Name=TGD57852.1;end_range=599,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456696.1;locus_tag=C9F07_20605;partial=true;product=U32 family peptidase;protein_id=TGD57852.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000064.1 1 599 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000064.1 Genbank region 1 599 . + . ID=PYKI01000064.1:1..599;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000064.1 Genbank gene 1 599 . + . ID=gene-C9F07_00395;Name=moeA;end_range=599,.;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=C9F07_00395;partial=true;start_range=.,1 PYKI01000064.1 Protein Homology CDS 1 599 . + 2 ID=cds-TGE30173.1;Parent=gene-C9F07_00395;Dbxref=NCBI_GP:TGE30173.1;Name=TGE30173.1;end_range=599,.;gbkey=CDS;gene=moeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459823.3;locus_tag=C9F07_00395;partial=true;product=molybdopterin molybdotransferase MoeA;protein_id=TGE30173.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002157.1 1 3215 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002157.1 Genbank region 1 3215 . + . ID=PYKI01002157.1:1..3215;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002157.1 Genbank gene 1 340 . + . ID=gene-C9F07_20940;Name=C9F07_20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20940;partial=true;start_range=.,1 PYKI01002157.1 Protein Homology CDS 1 340 . + 1 ID=cds-TGD57443.1;Parent=gene-C9F07_20940;Dbxref=NCBI_GP:TGD57443.1;Name=TGD57443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=C9F07_20940;partial=true;product=aminoglycoside 6'-acetyltransferase;protein_id=TGD57443.1;start_range=.,1;transl_table=11 PYKI01002157.1 Genbank gene 387 1589 . - . ID=gene-C9F07_20945;Name=C9F07_20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20945 PYKI01002157.1 Protein Homology CDS 387 1589 . - 0 ID=cds-TGD57444.1;Parent=gene-C9F07_20945;Dbxref=NCBI_GP:TGD57444.1;Name=TGD57444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455877.1;locus_tag=C9F07_20945;product=lactate oxidase;protein_id=TGD57444.1;transl_table=11 PYKI01002157.1 Genbank gene 1601 2176 . - . ID=gene-C9F07_20950;Name=C9F07_20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20950 PYKI01002157.1 Protein Homology CDS 1601 2176 . - 0 ID=cds-TGD57445.1;Parent=gene-C9F07_20950;Dbxref=NCBI_GP:TGD57445.1;Name=TGD57445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455876.1;locus_tag=C9F07_20950;product=polyisoprenoid-binding protein;protein_id=TGD57445.1;transl_table=11 PYKI01002157.1 Genbank gene 2372 3215 . - . ID=gene-C9F07_20955;Name=mdoD;end_range=3215,.;gbkey=Gene;gene=mdoD;gene_biotype=protein_coding;gene_synonym=opgD;locus_tag=C9F07_20955;partial=true PYKI01002157.1 Protein Homology CDS 2372 3215 . - 1 ID=cds-TGD57446.1;Parent=gene-C9F07_20955;Dbxref=NCBI_GP:TGD57446.1;Name=TGD57446.1;Note=involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans;end_range=3215,.;gbkey=CDS;gene=mdoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455875.1;locus_tag=C9F07_20955;partial=true;product=glucan biosynthesis protein D;protein_id=TGD57446.1;transl_table=11 ##sequence-region PYKI01003109.1 1 599 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003109.1 Genbank region 1 599 . + . ID=PYKI01003109.1:1..599;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003109.1 Genbank gene 16 599 . + . ID=gene-C9F07_31125;Name=potE;end_range=599,.;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=C9F07_31125;partial=true PYKI01003109.1 Protein Homology CDS 16 599 . + 0 ID=cds-TGD39572.1;Parent=gene-C9F07_31125;Dbxref=NCBI_GP:TGD39572.1;Name=TGD39572.1;Note=catalyzes the uptake of putrescine via a proton symport mechanism%2C as well as the efflux of putrescine by a putrescine/ornithine antiport system;end_range=599,.;gbkey=CDS;gene=potE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455261.1;locus_tag=C9F07_31125;partial=true;product=putrescine-ornithine antiporter;protein_id=TGD39572.1;transl_table=11 ##sequence-region PYKI01003379.1 1 598 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003379.1 Genbank region 1 598 . + . ID=PYKI01003379.1:1..598;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003379.1 Genbank pseudogene 76 598 . + . ID=gene-C9F07_34030;Name=C9F07_34030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34030;pseudo=true PYKI01003379.1 Protein Homology CDS 76 598 . + 0 ID=cds-C9F07_34030;Parent=gene-C9F07_34030;Note=Wzc%3B catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide)%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=C9F07_34030;product=tyrosine-protein kinase;pseudo=true;transl_table=11 ##sequence-region PYKI01002457.1 1 598 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002457.1 Genbank region 1 598 . + . ID=PYKI01002457.1:1..598;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002457.1 Genbank gene 126 598 . + . ID=gene-C9F07_24285;Name=C9F07_24285;end_range=598,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24285;partial=true PYKI01002457.1 Protein Homology CDS 126 598 . + 0 ID=cds-TGD50814.1;Parent=gene-C9F07_24285;Dbxref=NCBI_GP:TGD50814.1;Name=TGD50814.1;end_range=598,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=C9F07_24285;partial=true;product=hypothetical protein;protein_id=TGD50814.1;transl_table=11 ##sequence-region PYKI01002981.1 1 598 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002981.1 Genbank region 1 598 . + . ID=PYKI01002981.1:1..598;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002981.1 Genbank gene 1 179 . + . ID=gene-C9F07_29880;Name=C9F07_29880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29880;partial=true;start_range=.,1 PYKI01002981.1 Protein Homology CDS 1 179 . + 2 ID=cds-TGD41476.1;Parent=gene-C9F07_29880;Dbxref=NCBI_GP:TGD41476.1;Name=TGD41476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454879.1;locus_tag=C9F07_29880;partial=true;product=type VI secretion system contractile sheath small subunit;protein_id=TGD41476.1;start_range=.,1;transl_table=11 PYKI01002981.1 Genbank gene 203 598 . + . ID=gene-C9F07_29885;Name=C9F07_29885;end_range=598,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29885;partial=true PYKI01002981.1 Protein Homology CDS 203 598 . + 0 ID=cds-TGD41477.1;Parent=gene-C9F07_29885;Dbxref=NCBI_GP:TGD41477.1;Name=TGD41477.1;end_range=598,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=C9F07_29885;partial=true;product=type VI secretion system contractile sheath large subunit;protein_id=TGD41477.1;transl_table=11 ##sequence-region PYKI01003134.1 1 598 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003134.1 Genbank region 1 598 . + . ID=PYKI01003134.1:1..598;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003134.1 Genbank pseudogene 63 277 . - . ID=gene-C9F07_31390;Name=C9F07_31390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31390;pseudo=true PYKI01003134.1 Protein Homology CDS 63 277 . - 0 ID=cds-C9F07_31390;Parent=gene-C9F07_31390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001406537.1;locus_tag=C9F07_31390;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01003134.1 Genbank gene 358 598 . - . ID=gene-C9F07_31395;Name=C9F07_31395;end_range=598,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31395;partial=true PYKI01003134.1 Protein Homology CDS 358 598 . - 1 ID=cds-TGD38933.1;Parent=gene-C9F07_31395;Dbxref=NCBI_GP:TGD38933.1;Name=TGD38933.1;end_range=598,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457590.1;locus_tag=C9F07_31395;partial=true;product=flotillin;protein_id=TGD38933.1;transl_table=11 ##sequence-region PYKI01002798.1 1 597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002798.1 Genbank region 1 597 . + . ID=PYKI01002798.1:1..597;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002798.1 Genbank pseudogene 1 597 . - . ID=gene-C9F07_27975;Name=C9F07_27975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27975;pseudo=true PYKI01002798.1 Protein Homology CDS 1 597 . - 2 ID=cds-C9F07_27975;Parent=gene-C9F07_27975;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457103.1;locus_tag=C9F07_27975;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01002777.1 1 596 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002777.1 Genbank region 1 596 . + . ID=PYKI01002777.1:1..596;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002777.1 Genbank gene 168 596 . - . ID=gene-C9F07_27745;Name=C9F07_27745;end_range=596,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27745;partial=true PYKI01002777.1 Protein Homology CDS 168 596 . - 0 ID=cds-TGD46328.1;Parent=gene-C9F07_27745;Dbxref=NCBI_GP:TGD46328.1;Name=TGD46328.1;end_range=596,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=C9F07_27745;partial=true;product=phosphonate ABC transporter permease;protein_id=TGD46328.1;transl_table=11 ##sequence-region PYKI01003561.1 1 595 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003561.1 Genbank region 1 595 . + . ID=PYKI01003561.1:1..595;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003561.1 Genbank gene 226 595 . + . ID=gene-C9F07_35965;Name=C9F07_35965;end_range=595,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35965;partial=true PYKI01003561.1 Protein Homology CDS 226 595 . + 0 ID=cds-TGD30479.1;Parent=gene-C9F07_35965;Dbxref=NCBI_GP:TGD30479.1;Name=TGD30479.1;end_range=595,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458729.1;locus_tag=C9F07_35965;partial=true;product=SAM-dependent methyltransferase;protein_id=TGD30479.1;transl_table=11 ##sequence-region PYKI01003419.1 1 595 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003419.1 Genbank region 1 595 . + . ID=PYKI01003419.1:1..595;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003419.1 Genbank pseudogene 49 595 . + . ID=gene-C9F07_34390;Name=C9F07_34390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34390;pseudo=true PYKI01003419.1 Protein Homology CDS 49 595 . + 0 ID=cds-C9F07_34390;Parent=gene-C9F07_34390;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=C9F07_34390;product=C4-dicarboxylate ABC transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01000496.1 1 594 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000496.1 Genbank region 1 594 . + . ID=PYKI01000496.1:1..594;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000496.1 Genbank gene 1 68 . + . ID=gene-C9F07_04015;Name=C9F07_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04015;partial=true;start_range=.,1 PYKI01000496.1 Protein Homology CDS 1 68 . + 2 ID=cds-TGE17519.1;Parent=gene-C9F07_04015;Dbxref=NCBI_GP:TGE17519.1;Name=TGE17519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456282.1;locus_tag=C9F07_04015;partial=true;product=2-keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase;protein_id=TGE17519.1;start_range=.,1;transl_table=11 PYKI01000496.1 Genbank gene 122 594 . - . ID=gene-C9F07_04020;Name=C9F07_04020;end_range=594,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04020;partial=true PYKI01000496.1 Protein Homology CDS 122 594 . - 2 ID=cds-TGE17520.1;Parent=gene-C9F07_04020;Dbxref=NCBI_GP:TGE17520.1;Name=TGE17520.1;end_range=594,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=C9F07_04020;partial=true;product=sodium-potassium/proton antiporter ChaA;protein_id=TGE17520.1;transl_table=11 ##sequence-region PYKI01003409.1 1 3213 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003409.1 Genbank region 1 3213 . + . ID=PYKI01003409.1:1..3213;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003409.1 Genbank gene 1 1155 . + . ID=gene-C9F07_34270;Name=C9F07_34270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34270;partial=true;start_range=.,1 PYKI01003409.1 Protein Homology CDS 1 1155 . + 0 ID=cds-TGD33890.1;Parent=gene-C9F07_34270;Dbxref=NCBI_GP:TGD33890.1;Name=TGD33890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457365.1;locus_tag=C9F07_34270;partial=true;product=HAAAP family serine/threonine permease;protein_id=TGD33890.1;start_range=.,1;transl_table=11 PYKI01003409.1 Genbank gene 1214 2581 . + . ID=gene-C9F07_34275;Name=C9F07_34275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34275 PYKI01003409.1 Protein Homology CDS 1214 2581 . + 0 ID=cds-TGD33891.1;Parent=gene-C9F07_34275;Dbxref=NCBI_GP:TGD33891.1;Name=TGD33891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=C9F07_34275;product=L-serine ammonia-lyase;protein_id=TGD33891.1;transl_table=11 PYKI01003409.1 Genbank pseudogene 2578 2762 . - . ID=gene-C9F07_34280;Name=C9F07_34280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34280;pseudo=true PYKI01003409.1 Protein Homology CDS 2578 2762 . - 0 ID=cds-C9F07_34280;Parent=gene-C9F07_34280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219194.1;locus_tag=C9F07_34280;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01003409.1 Genbank gene 2691 3213 . + . ID=gene-C9F07_34285;Name=C9F07_34285;end_range=3213,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34285;partial=true PYKI01003409.1 Protein Homology CDS 2691 3213 . + 0 ID=cds-TGD33892.1;Parent=gene-C9F07_34285;Dbxref=NCBI_GP:TGD33892.1;Name=TGD33892.1;Note=similar to flap endonuclease%3B FEN family%3B protein from E. coli does not have exonuclease activity;end_range=3213,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457367.1;locus_tag=C9F07_34285;partial=true;product=flap endonuclease Xni;protein_id=TGD33892.1;transl_table=11 ##sequence-region PYKI01000561.1 1 593 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000561.1 Genbank region 1 593 . + . ID=PYKI01000561.1:1..593;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000561.1 Genbank gene 1 388 . + . ID=gene-C9F07_04740;Name=tppB;gbkey=Gene;gene=tppB;gene_biotype=protein_coding;gene_synonym=ydgR;locus_tag=C9F07_04740;partial=true;start_range=.,1 PYKI01000561.1 Protein Homology CDS 1 388 . + 1 ID=cds-TGE14808.1;Parent=gene-C9F07_04740;Dbxref=NCBI_GP:TGE14808.1;Name=TGE14808.1;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation;gbkey=CDS;gene=tppB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=C9F07_04740;partial=true;product=dipeptide/tripeptide permease;protein_id=TGE14808.1;start_range=.,1;transl_table=11 PYKI01000561.1 Genbank gene 480 593 . - . ID=gene-C9F07_04745;Name=C9F07_04745;end_range=593,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04745;partial=true PYKI01000561.1 Protein Homology CDS 480 593 . - 0 ID=cds-TGE14809.1;Parent=gene-C9F07_04745;Dbxref=NCBI_GP:TGE14809.1;Name=TGE14809.1;Note=predicted SAM-dependent methyltransferase;end_range=593,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=C9F07_04745;partial=true;product=16S rRNA (guanine(1516)-N(2))-methyltransferase;protein_id=TGE14809.1;transl_table=11 ##sequence-region PYKI01002660.1 1 593 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002660.1 Genbank region 1 593 . + . ID=PYKI01002660.1:1..593;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002660.1 Genbank gene 61 135 . + . ID=gene-C9F07_26485;Name=C9F07_26485;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_26485 PYKI01002660.1 tRNAscan-SE tRNA 61 135 . + . ID=rna-C9F07_26485;Parent=gene-C9F07_26485;anticodon=(pos:93..95);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_26485;product=tRNA-Gln PYKI01002660.1 tRNAscan-SE exon 61 135 . + . ID=exon-C9F07_26485-1;Parent=rna-C9F07_26485;anticodon=(pos:93..95);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_26485;product=tRNA-Gln PYKI01002660.1 Genbank gene 179 253 . + . ID=gene-C9F07_26490;Name=C9F07_26490;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_26490 PYKI01002660.1 tRNAscan-SE tRNA 179 253 . + . ID=rna-C9F07_26490;Parent=gene-C9F07_26490;anticodon=(pos:211..213);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_26490;product=tRNA-Gln PYKI01002660.1 tRNAscan-SE exon 179 253 . + . ID=exon-C9F07_26490-1;Parent=rna-C9F07_26490;anticodon=(pos:211..213);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_26490;product=tRNA-Gln PYKI01002660.1 Genbank gene 386 593 . - . ID=gene-C9F07_26495;Name=ubiF;end_range=593,.;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;gene_synonym=yleB;locus_tag=C9F07_26495;partial=true PYKI01002660.1 Protein Homology CDS 386 593 . - 1 ID=cds-TGD49208.1;Parent=gene-C9F07_26495;Dbxref=NCBI_GP:TGD49208.1;Name=TGD49208.1;Note=catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q;end_range=593,.;gbkey=CDS;gene=ubiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455240.1;locus_tag=C9F07_26495;partial=true;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=TGD49208.1;transl_table=11 ##sequence-region PYKI01001180.1 1 593 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001180.1 Genbank region 1 593 . + . ID=PYKI01001180.1:1..593;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001180.1 Genbank pseudogene 10 593 . + . ID=gene-C9F07_11040;Name=C9F07_11040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11040;pseudo=true PYKI01001180.1 Protein Homology CDS 10 593 . + 0 ID=cds-C9F07_11040;Parent=gene-C9F07_11040;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457834.1;locus_tag=C9F07_11040;product=ATP-dependent DNA helicase Rep;pseudo=true;transl_table=11 ##sequence-region PYKI01002120.1 1 593 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002120.1 Genbank region 1 593 . + . ID=PYKI01002120.1:1..593;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002120.1 Genbank gene 1 553 . + . ID=gene-C9F07_20525;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=C9F07_20525;partial=true;start_range=.,1 PYKI01002120.1 Protein Homology CDS 1 553 . + 1 ID=cds-TGD58321.1;Parent=gene-C9F07_20525;Dbxref=NCBI_GP:TGD58321.1;Name=TGD58321.1;gbkey=CDS;gene=thiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454720.1;locus_tag=C9F07_20525;partial=true;product=thiamine ABC transporter substrate binding subunit;protein_id=TGD58321.1;start_range=.,1;transl_table=11 PYKI01002120.1 Genbank gene 529 593 . + . ID=gene-C9F07_20530;Name=C9F07_20530;end_range=593,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20530;partial=true PYKI01002120.1 Protein Homology CDS 529 593 . + 0 ID=cds-TGD58322.1;Parent=gene-C9F07_20530;Dbxref=NCBI_GP:TGD58322.1;Name=TGD58322.1;end_range=593,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001714781.1;locus_tag=C9F07_20530;partial=true;product=thiamine transporter;protein_id=TGD58322.1;transl_table=11 ##sequence-region PYKI01001208.1 1 593 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001208.1 Genbank region 1 593 . + . ID=PYKI01001208.1:1..593;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001208.1 Genbank pseudogene 1 515 . + . ID=gene-C9F07_11315;Name=C9F07_11315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11315;pseudo=true PYKI01001208.1 Protein Homology CDS 1 515 . + 2 ID=cds-C9F07_11315;Parent=gene-C9F07_11315;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454741.1;locus_tag=C9F07_11315;product=UDP-N-acetylmuramate--L-alanine ligase;pseudo=true;transl_table=11 ##sequence-region PYKI01001956.1 1 591 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001956.1 Genbank region 1 591 . + . ID=PYKI01001956.1:1..591;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001956.1 Genbank gene 1 381 . + . ID=gene-C9F07_18885;Name=C9F07_18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18885;partial=true;start_range=.,1 PYKI01001956.1 Protein Homology CDS 1 381 . + 0 ID=cds-TGD60439.1;Parent=gene-C9F07_18885;Dbxref=NCBI_GP:TGD60439.1;Name=TGD60439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462733.1;locus_tag=C9F07_18885;partial=true;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=TGD60439.1;start_range=.,1;transl_table=11 PYKI01001956.1 Genbank gene 497 591 . + . ID=gene-C9F07_18890;Name=C9F07_18890;end_range=591,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18890;partial=true PYKI01001956.1 Protein Homology CDS 497 591 . + 0 ID=cds-TGD60440.1;Parent=gene-C9F07_18890;Dbxref=NCBI_GP:TGD60440.1;Name=TGD60440.1;end_range=591,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458108.1;locus_tag=C9F07_18890;partial=true;product=LysR family transcriptional regulator;protein_id=TGD60440.1;transl_table=11 ##sequence-region PYKI01000471.1 1 591 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000471.1 Genbank region 1 591 . + . ID=PYKI01000471.1:1..591;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000471.1 Genbank gene 1 591 . - . ID=gene-C9F07_03750;Name=C9F07_03750;end_range=591,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03750;partial=true;start_range=.,1 PYKI01000471.1 Protein Homology CDS 1 591 . - 2 ID=cds-TGE19602.1;Parent=gene-C9F07_03750;Dbxref=NCBI_GP:TGE19602.1;Name=TGE19602.1;Note=catalyzes the formation of malate from fumerate;end_range=591,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458599.1;locus_tag=C9F07_03750;partial=true;product=fumarate hydratase;protein_id=TGE19602.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001614.1 1 591 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001614.1 Genbank region 1 591 . + . ID=PYKI01001614.1:1..591;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001614.1 Genbank pseudogene 1 459 . + . ID=gene-C9F07_15375;Name=C9F07_15375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15375;pseudo=true PYKI01001614.1 Protein Homology CDS 1 459 . + 0 ID=cds-C9F07_15375;Parent=gene-C9F07_15375;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=C9F07_15375;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001614.1 Genbank gene 425 591 . + . ID=gene-C9F07_15380;Name=C9F07_15380;end_range=591,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15380;partial=true PYKI01001614.1 Protein Homology CDS 425 591 . + 0 ID=cds-TGD70847.1;Parent=gene-C9F07_15380;Dbxref=NCBI_GP:TGD70847.1;Name=TGD70847.1;end_range=591,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454936.1;locus_tag=C9F07_15380;partial=true;product=fimbrial assembly protein;protein_id=TGD70847.1;transl_table=11 ##sequence-region PYKI01001555.1 1 591 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001555.1 Genbank region 1 591 . + . ID=PYKI01001555.1:1..591;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001555.1 Genbank gene 1 591 . + . ID=gene-C9F07_14905;Name=C9F07_14905;end_range=591,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14905;partial=true;start_range=.,1 PYKI01001555.1 Protein Homology CDS 1 591 . + 0 ID=cds-TGD74438.1;Parent=gene-C9F07_14905;Dbxref=NCBI_GP:TGD74438.1;Name=TGD74438.1;end_range=591,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458323.1;locus_tag=C9F07_14905;partial=true;product=oligopeptidase A;protein_id=TGD74438.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003125.1 1 3199 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003125.1 Genbank region 1 3199 . + . ID=PYKI01003125.1:1..3199;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003125.1 Genbank pseudogene 1 369 . + . ID=gene-C9F07_31270;Name=C9F07_31270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31270;pseudo=true PYKI01003125.1 Protein Homology CDS 1 369 . + 0 ID=cds-C9F07_31270;Parent=gene-C9F07_31270;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458022.1;locus_tag=C9F07_31270;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 PYKI01003125.1 Genbank gene 384 830 . - . ID=gene-C9F07_31275;Name=C9F07_31275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31275 PYKI01003125.1 Protein Homology CDS 384 830 . - 0 ID=cds-TGD39150.1;Parent=gene-C9F07_31275;Dbxref=NCBI_GP:TGD39150.1;Name=TGD39150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458021.1;locus_tag=C9F07_31275;product=type II toxin-antitoxin system HigA family antitoxin;protein_id=TGD39150.1;transl_table=11 PYKI01003125.1 Genbank gene 827 1138 . - . ID=gene-C9F07_31280;Name=C9F07_31280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31280 PYKI01003125.1 Protein Homology CDS 827 1138 . - 0 ID=cds-TGD39151.1;Parent=gene-C9F07_31280;Dbxref=NCBI_GP:TGD39151.1;Name=TGD39151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=C9F07_31280;product=type II toxin-antitoxin system HigB family toxin;protein_id=TGD39151.1;transl_table=11 PYKI01003125.1 Genbank gene 1200 2153 . - . ID=gene-C9F07_31285;Name=C9F07_31285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31285 PYKI01003125.1 Protein Homology CDS 1200 2153 . - 0 ID=cds-TGD39152.1;Parent=gene-C9F07_31285;Dbxref=NCBI_GP:TGD39152.1;Name=TGD39152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=C9F07_31285;product=alpha/beta hydrolase;protein_id=TGD39152.1;transl_table=11 PYKI01003125.1 Genbank gene 2371 2682 . + . ID=gene-C9F07_31290;Name=C9F07_31290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31290 PYKI01003125.1 Protein Homology CDS 2371 2682 . + 0 ID=cds-TGD39153.1;Parent=gene-C9F07_31290;Dbxref=NCBI_GP:TGD39153.1;Name=TGD39153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=C9F07_31290;product=toxin HigB-2;protein_id=TGD39153.1;transl_table=11 PYKI01003125.1 Genbank gene 2719 2973 . + . ID=gene-C9F07_31295;Name=C9F07_31295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31295 PYKI01003125.1 Protein Homology CDS 2719 2973 . + 0 ID=cds-TGD39155.1;Parent=gene-C9F07_31295;Dbxref=NCBI_GP:TGD39155.1;Name=TGD39155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462913.3;locus_tag=C9F07_31295;product=transcriptional regulator;protein_id=TGD39155.1;transl_table=11 PYKI01003125.1 Genbank gene 3020 3199 . - . ID=gene-C9F07_31300;Name=C9F07_31300;end_range=3199,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31300;partial=true PYKI01003125.1 Protein Homology CDS 3020 3199 . - 0 ID=cds-TGD39154.1;Parent=gene-C9F07_31300;Dbxref=NCBI_GP:TGD39154.1;Name=TGD39154.1;Note=required for the formation of active formate dehydrogenase;end_range=3199,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=C9F07_31300;partial=true;product=formate dehydrogenase accessory protein FdhE;protein_id=TGD39154.1;transl_table=11 ##sequence-region PYKI01002806.1 1 6331 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002806.1 Genbank region 1 6331 . + . ID=PYKI01002806.1:1..6331;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002806.1 Genbank gene 1 353 . - . ID=gene-C9F07_28080;Name=C9F07_28080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28080;partial=true;start_range=.,1 PYKI01002806.1 Protein Homology CDS 1 353 . - 0 ID=cds-TGD45781.1;Parent=gene-C9F07_28080;Dbxref=NCBI_GP:TGD45781.1;Name=TGD45781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=C9F07_28080;partial=true;product=peptide chain release factor 3;protein_id=TGD45781.1;start_range=.,1;transl_table=11 PYKI01002806.1 Genbank gene 445 1122 . - . ID=gene-C9F07_28085;Name=C9F07_28085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28085 PYKI01002806.1 Protein Homology CDS 445 1122 . - 0 ID=cds-TGD45780.1;Parent=gene-C9F07_28085;Dbxref=NCBI_GP:TGD45780.1;Name=TGD45780.1;Note=manganese-dependent 5'-nucleotidase%3B specific for 5'-UMP%2C 5'-dUMP%2C and 5'-dTMP%3B member of haloacid dehalogenase (HAD)-like hydrolase superfamily;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=C9F07_28085;product=dUMP phosphatase;protein_id=TGD45780.1;transl_table=11 PYKI01002806.1 Genbank gene 1144 1590 . - . ID=gene-C9F07_28090;Name=C9F07_28090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28090 PYKI01002806.1 Protein Homology CDS 1144 1590 . - 0 ID=cds-TGD45774.1;Parent=gene-C9F07_28090;Dbxref=NCBI_GP:TGD45774.1;Name=TGD45774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458970.1;locus_tag=C9F07_28090;product=ribosomal-protein-alanine N-acetyltransferase RimI;protein_id=TGD45774.1;transl_table=11 PYKI01002806.1 Genbank gene 1535 1972 . - . ID=gene-C9F07_28095;Name=C9F07_28095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28095 PYKI01002806.1 Protein Homology CDS 1535 1972 . - 0 ID=cds-TGD45775.1;Parent=gene-C9F07_28095;Dbxref=NCBI_GP:TGD45775.1;Name=TGD45775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=C9F07_28095;product=DNA polymerase III subunit psi;protein_id=TGD45775.1;transl_table=11 PYKI01002806.1 Genbank gene 2075 3103 . + . ID=gene-C9F07_28100;Name=C9F07_28100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28100 PYKI01002806.1 Protein Homology CDS 2075 3103 . + 0 ID=cds-TGD45776.1;Parent=gene-C9F07_28100;Dbxref=NCBI_GP:TGD45776.1;Name=TGD45776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=C9F07_28100;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=TGD45776.1;transl_table=11 PYKI01002806.1 Genbank gene 3294 3380 . + . ID=gene-C9F07_28105;Name=C9F07_28105;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_28105 PYKI01002806.1 tRNAscan-SE tRNA 3294 3380 . + . ID=rna-C9F07_28105;Parent=gene-C9F07_28105;anticodon=(pos:3328..3330);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_28105;product=tRNA-Leu PYKI01002806.1 tRNAscan-SE exon 3294 3380 . + . ID=exon-C9F07_28105-1;Parent=rna-C9F07_28105;anticodon=(pos:3328..3330);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_28105;product=tRNA-Leu PYKI01002806.1 Genbank gene 3412 3648 . - . ID=gene-C9F07_28110;Name=C9F07_28110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28110 PYKI01002806.1 Protein Homology CDS 3412 3648 . - 0 ID=cds-TGD45782.1;Parent=gene-C9F07_28110;Dbxref=NCBI_GP:TGD45782.1;Name=TGD45782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458967.1;locus_tag=C9F07_28110;product=DUF1435 domain-containing protein;protein_id=TGD45782.1;transl_table=11 PYKI01002806.1 Genbank gene 3899 4963 . + . ID=gene-C9F07_28115;Name=C9F07_28115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28115 PYKI01002806.1 Protein Homology CDS 3899 4963 . + 0 ID=cds-TGD45777.1;Parent=gene-C9F07_28115;Dbxref=NCBI_GP:TGD45777.1;Name=TGD45777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=C9F07_28115;product=GGDEF domain-containing protein;protein_id=TGD45777.1;transl_table=11 PYKI01002806.1 Genbank gene 5084 5872 . + . ID=gene-C9F07_28120;Name=C9F07_28120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28120 PYKI01002806.1 Protein Homology CDS 5084 5872 . + 0 ID=cds-TGD45778.1;Parent=gene-C9F07_28120;Dbxref=NCBI_GP:TGD45778.1;Name=TGD45778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458965.1;locus_tag=C9F07_28120;product=hydroxamate siderophore iron reductase FhuF;protein_id=TGD45778.1;transl_table=11 PYKI01002806.1 Genbank gene 6023 6331 . + . ID=gene-C9F07_28125;Name=C9F07_28125;end_range=6331,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28125;partial=true PYKI01002806.1 Protein Homology CDS 6023 6331 . + 0 ID=cds-TGD45779.1;Parent=gene-C9F07_28125;Dbxref=NCBI_GP:TGD45779.1;Name=TGD45779.1;end_range=6331,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=C9F07_28125;partial=true;product=cys-tRNA(pro)/cys-tRNA(cys) deacylase;protein_id=TGD45779.1;transl_table=11 ##sequence-region PYKI01000530.1 1 590 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000530.1 Genbank region 1 590 . + . ID=PYKI01000530.1:1..590;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000530.1 Genbank gene 1 590 . + . ID=gene-C9F07_04400;Name=C9F07_04400;end_range=590,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04400;partial=true;start_range=.,1 PYKI01000530.1 Protein Homology CDS 1 590 . + 2 ID=cds-TGE15915.1;Parent=gene-C9F07_04400;Dbxref=NCBI_GP:TGE15915.1;Name=TGE15915.1;end_range=590,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=C9F07_04400;partial=true;product=NAD(P)H-hydrate epimerase;protein_id=TGE15915.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000632.1 1 589 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000632.1 Genbank region 1 589 . + . ID=PYKI01000632.1:1..589;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000632.1 Genbank gene 1 228 . + . ID=gene-C9F07_05455;Name=C9F07_05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05455;partial=true;start_range=.,1 PYKI01000632.1 Protein Homology CDS 1 228 . + 0 ID=cds-TGE13096.1;Parent=gene-C9F07_05455;Dbxref=NCBI_GP:TGE13096.1;Name=TGE13096.1;Note=in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA%3B cells lacking this function can grow%2C but are outcompeted by wild-type%3B SAM-dependent m(3)U1498 methyltransferase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457486.1;locus_tag=C9F07_05455;partial=true;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=TGE13096.1;start_range=.,1;transl_table=11 PYKI01000632.1 Genbank gene 248 589 . + . ID=gene-C9F07_05460;Name=C9F07_05460;end_range=589,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05460;partial=true PYKI01000632.1 Protein Homology CDS 248 589 . + 0 ID=cds-TGE13097.1;Parent=gene-C9F07_05460;Dbxref=NCBI_GP:TGE13097.1;Name=TGE13097.1;Note=catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione;end_range=589,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=C9F07_05460;partial=true;product=glutathione synthase;protein_id=TGE13097.1;transl_table=11 ##sequence-region PYKI01001292.1 1 588 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001292.1 Genbank region 1 588 . + . ID=PYKI01001292.1:1..588;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001292.1 Genbank gene 1 588 . - . ID=gene-C9F07_12085;Name=hemN;end_range=588,.;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=C9F07_12085;partial=true;start_range=.,1 PYKI01001292.1 Protein Homology CDS 1 588 . - 1 ID=cds-TGD87645.1;Parent=gene-C9F07_12085;Dbxref=NCBI_GP:TGD87645.1;Name=TGD87645.1;end_range=588,.;gbkey=CDS;gene=hemN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121847.1;locus_tag=C9F07_12085;partial=true;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=TGD87645.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000572.1 1 587 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000572.1 Genbank region 1 587 . + . ID=PYKI01000572.1:1..587;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000572.1 Genbank gene 361 587 . + . ID=gene-C9F07_04840;Name=C9F07_04840;end_range=587,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04840;partial=true PYKI01000572.1 Protein Homology CDS 361 587 . + 0 ID=cds-TGE14549.1;Parent=gene-C9F07_04840;Dbxref=NCBI_GP:TGE14549.1;Name=TGE14549.1;end_range=587,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455144.1;locus_tag=C9F07_04840;partial=true;product=translocase;protein_id=TGE14549.1;transl_table=11 ##sequence-region PYKI01000745.1 1 587 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000745.1 Genbank region 1 587 . + . ID=PYKI01000745.1:1..587;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000745.1 Genbank pseudogene 1 587 . - . ID=gene-C9F07_06580;Name=C9F07_06580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06580;pseudo=true PYKI01000745.1 Protein Homology CDS 1 587 . - 0 ID=cds-C9F07_06580;Parent=gene-C9F07_06580;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=C9F07_06580;product=cysteine desulfurase CsdA;pseudo=true;transl_table=11 ##sequence-region PYKI01003585.1 1 585 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003585.1 Genbank region 1 585 . + . ID=PYKI01003585.1:1..585;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003585.1 Genbank pseudogene 1 521 . - . ID=gene-C9F07_36175;Name=C9F07_36175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_36175;pseudo=true PYKI01003585.1 Protein Homology CDS 1 521 . - 0 ID=cds-C9F07_36175;Parent=gene-C9F07_36175;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466168.1;locus_tag=C9F07_36175;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000639.1 1 585 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000639.1 Genbank region 1 585 . + . ID=PYKI01000639.1:1..585;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000639.1 Genbank gene 84 585 . + . ID=gene-C9F07_05525;Name=C9F07_05525;end_range=585,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05525;partial=true PYKI01000639.1 Protein Homology CDS 84 585 . + 0 ID=cds-TGE12834.1;Parent=gene-C9F07_05525;Dbxref=NCBI_GP:TGE12834.1;Name=TGE12834.1;end_range=585,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456992.1;locus_tag=C9F07_05525;partial=true;product=ethanolamine ammonia-lyase;protein_id=TGE12834.1;transl_table=11 ##sequence-region PYKI01001870.1 1 585 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001870.1 Genbank region 1 585 . + . ID=PYKI01001870.1:1..585;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001870.1 Genbank pseudogene 1 519 . + . ID=gene-C9F07_18000;Name=C9F07_18000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18000;pseudo=true PYKI01001870.1 Protein Homology CDS 1 519 . + 0 ID=cds-C9F07_18000;Parent=gene-C9F07_18000;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=C9F07_18000;product=patatin family protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002453.1 1 584 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002453.1 Genbank region 1 584 . + . ID=PYKI01002453.1:1..584;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002453.1 Genbank gene 91 584 . - . ID=gene-C9F07_24235;Name=C9F07_24235;end_range=584,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24235;partial=true PYKI01002453.1 Protein Homology CDS 91 584 . - 2 ID=cds-TGD50881.1;Parent=gene-C9F07_24235;Dbxref=NCBI_GP:TGD50881.1;Name=TGD50881.1;Note=catalyzes the conversion of guanosine 5'-triphosphate%2C3'-diphosphate (pppGpp) to guanosine 5'-diphosphate%2C3'-diphosphate (ppGpp)%3B pppGpp and ppGpp control the stringent response during amino acid starvation;end_range=584,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457833.1;locus_tag=C9F07_24235;partial=true;product=guanosine-5'-triphosphate%2C3'-diphosphate pyrophosphatase;protein_id=TGD50881.1;transl_table=11 ##sequence-region PYKI01001240.1 1 3194 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001240.1 Genbank region 1 3194 . + . ID=PYKI01001240.1:1..3194;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001240.1 Genbank gene 1 1444 . - . ID=gene-C9F07_11570;Name=C9F07_11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11570;partial=true;start_range=.,1 PYKI01001240.1 Protein Homology CDS 1 1444 . - 0 ID=cds-TGD90295.1;Parent=gene-C9F07_11570;Dbxref=NCBI_GP:TGD90295.1;Name=TGD90295.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=C9F07_11570;partial=true;product=multidrug transporter subunit MdtC;protein_id=TGD90295.1;start_range=.,1;transl_table=11 PYKI01001240.1 Genbank pseudogene 1445 3142 . - . ID=gene-C9F07_11575;Name=C9F07_11575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11575;pseudo=true PYKI01001240.1 Protein Homology CDS 1445 3142 . - 0 ID=cds-C9F07_11575;Parent=gene-C9F07_11575;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456673.1;locus_tag=C9F07_11575;product=multidrug transporter subunit MdtC;pseudo=true;transl_table=11 ##sequence-region PYKI01002946.1 1 584 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002946.1 Genbank region 1 584 . + . ID=PYKI01002946.1:1..584;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002946.1 Genbank gene 1 338 . - . ID=gene-C9F07_29520;Name=C9F07_29520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29520;partial=true;start_range=.,1 PYKI01002946.1 Protein Homology CDS 1 338 . - 0 ID=cds-TGD42305.1;Parent=gene-C9F07_29520;Dbxref=NCBI_GP:TGD42305.1;Name=TGD42305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=C9F07_29520;partial=true;product=valine--tRNA ligase;protein_id=TGD42305.1;start_range=.,1;transl_table=11 PYKI01002946.1 Genbank gene 338 584 . - . ID=gene-C9F07_29525;Name=C9F07_29525;end_range=584,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29525;partial=true PYKI01002946.1 Protein Homology CDS 338 584 . - 1 ID=cds-TGD42306.1;Parent=gene-C9F07_29525;Dbxref=NCBI_GP:TGD42306.1;Name=TGD42306.1;Note=binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;end_range=584,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458894.1;locus_tag=C9F07_29525;partial=true;product=DNA polymerase III subunit chi;protein_id=TGD42306.1;transl_table=11 ##sequence-region PYKI01000727.1 1 583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000727.1 Genbank region 1 583 . + . ID=PYKI01000727.1:1..583;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000727.1 Genbank gene 21 583 . - . ID=gene-C9F07_06385;Name=C9F07_06385;end_range=583,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06385;partial=true PYKI01000727.1 Protein Homology CDS 21 583 . - 2 ID=cds-TGE11040.1;Parent=gene-C9F07_06385;Dbxref=NCBI_GP:TGE11040.1;Name=TGE11040.1;Note=with CbiNQ forms the ABC transporter for cobalt import;end_range=583,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=C9F07_06385;partial=true;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=TGE11040.1;transl_table=11 ##sequence-region PYKI01000785.1 1 583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000785.1 Genbank region 1 583 . + . ID=PYKI01000785.1:1..583;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000785.1 Genbank pseudogene 1 536 . - . ID=gene-C9F07_07085;Name=invE;gbkey=Gene;gene=invE;gene_biotype=pseudogene;locus_tag=C9F07_07085;pseudo=true PYKI01000785.1 Protein Homology CDS 1 536 . - 0 ID=cds-C9F07_07085;Parent=gene-C9F07_07085;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457291.1;locus_tag=C9F07_07085;product=type III secretion system gatekeeper InvE;pseudo=true;transl_table=11 ##sequence-region PYKI01002349.1 1 583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002349.1 Genbank region 1 583 . + . ID=PYKI01002349.1:1..583;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002349.1 Genbank pseudogene 85 537 . - . ID=gene-C9F07_23080;Name=C9F07_23080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23080;pseudo=true PYKI01002349.1 Protein Homology CDS 85 537 . - 0 ID=cds-C9F07_23080;Parent=gene-C9F07_23080;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455993.1;locus_tag=C9F07_23080;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01002316.1 1 583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002316.1 Genbank region 1 583 . + . ID=PYKI01002316.1:1..583;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002316.1 Genbank gene 1 583 . + . ID=gene-C9F07_22715;Name=C9F07_22715;end_range=583,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22715;partial=true;start_range=.,1 PYKI01002316.1 Protein Homology CDS 1 583 . + 0 ID=cds-TGD54110.1;Parent=gene-C9F07_22715;Dbxref=NCBI_GP:TGD54110.1;Name=TGD54110.1;Note=DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate;end_range=583,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458434.1;locus_tag=C9F07_22715;partial=true;product=bifunctional succinylornithine transaminase/acetylornithine transaminase;protein_id=TGD54110.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002075.1 1 582 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002075.1 Genbank region 1 582 . + . ID=PYKI01002075.1:1..582;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002075.1 Genbank pseudogene 226 504 . + . ID=gene-C9F07_20135;Name=C9F07_20135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20135;pseudo=true PYKI01002075.1 Protein Homology CDS 226 504 . + 0 ID=cds-C9F07_20135;Parent=gene-C9F07_20135;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454779.1;locus_tag=C9F07_20135;product=polyamine aminopropyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01000739.1 1 582 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000739.1 Genbank region 1 582 . + . ID=PYKI01000739.1:1..582;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000739.1 Genbank pseudogene 62 582 . - . ID=gene-C9F07_06500;Name=C9F07_06500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06500;pseudo=true PYKI01000739.1 Protein Homology CDS 62 582 . - 2 ID=cds-C9F07_06500;Parent=gene-C9F07_06500;Note=cell division protein%3B signal recognition protein receptor%3B functions in the targeting and insertion of membrane proteins%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458350.1;locus_tag=C9F07_06500;product=signal recognition particle-docking protein FtsY;pseudo=true;transl_table=11 ##sequence-region PYKI01001687.1 1 581 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001687.1 Genbank region 1 581 . + . ID=PYKI01001687.1:1..581;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001687.1 Genbank gene 1 162 . - . ID=gene-C9F07_16105;Name=C9F07_16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16105;partial=true;start_range=.,1 PYKI01001687.1 Protein Homology CDS 1 162 . - 0 ID=cds-TGD69726.1;Parent=gene-C9F07_16105;Dbxref=NCBI_GP:TGD69726.1;Name=TGD69726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=C9F07_16105;partial=true;product=tricarboxylic transporter;protein_id=TGD69726.1;start_range=.,1;transl_table=11 PYKI01001687.1 Genbank gene 317 581 . + . ID=gene-C9F07_16110;Name=C9F07_16110;end_range=581,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16110;partial=true PYKI01001687.1 Protein Homology CDS 317 581 . + 0 ID=cds-TGD69727.1;Parent=gene-C9F07_16110;Dbxref=NCBI_GP:TGD69727.1;Name=TGD69727.1;Note=transcriptional activator of tricarboxylate transport system genes;end_range=581,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=C9F07_16110;partial=true;product=DNA-binding response regulator;protein_id=TGD69727.1;transl_table=11 ##sequence-region PYKI01000016.1 1 580 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000016.1 Genbank region 1 580 . + . ID=PYKI01000016.1:1..580;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000016.1 Genbank gene 1 499 . + . ID=gene-C9F07_00090;Name=C9F07_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00090;partial=true;start_range=.,1 PYKI01000016.1 Protein Homology CDS 1 499 . + 1 ID=cds-TGE30214.1;Parent=gene-C9F07_00090;Dbxref=NCBI_GP:TGE30214.1;Name=TGE30214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454739.1;locus_tag=C9F07_00090;partial=true;product=cell division protein FtsW;protein_id=TGE30214.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002227.1 1 3191 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002227.1 Genbank region 1 3191 . + . ID=PYKI01002227.1:1..3191;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002227.1 Genbank gene 1 543 . - . ID=gene-C9F07_21720;Name=C9F07_21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21720;partial=true;start_range=.,1 PYKI01002227.1 Protein Homology CDS 1 543 . - 0 ID=cds-TGD56204.1;Parent=gene-C9F07_21720;Dbxref=NCBI_GP:TGD56204.1;Name=TGD56204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218975.1;locus_tag=C9F07_21720;partial=true;product=integrase;protein_id=TGD56204.1;start_range=.,1;transl_table=11 PYKI01002227.1 Genbank gene 706 800 . - . ID=gene-C9F07_21725;Name=C9F07_21725;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_21725 PYKI01002227.1 tRNAscan-SE tRNA 706 800 . - . ID=rna-C9F07_21725;Parent=gene-C9F07_21725;anticodon=(pos:complement(764..766));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_21725;product=tRNA-Sec PYKI01002227.1 tRNAscan-SE exon 706 800 . - . ID=exon-C9F07_21725-1;Parent=rna-C9F07_21725;anticodon=(pos:complement(764..766));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_21725;product=tRNA-Sec PYKI01002227.1 Genbank gene 1088 2470 . + . ID=gene-C9F07_21730;Name=C9F07_21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21730 PYKI01002227.1 Protein Homology CDS 1088 2470 . + 0 ID=cds-TGD56202.1;Parent=gene-C9F07_21730;Dbxref=NCBI_GP:TGD56202.1;Name=TGD56202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458178.1;locus_tag=C9F07_21730;product=glycoside-pentoside-hexuronide family transporter;protein_id=TGD56202.1;transl_table=11 PYKI01002227.1 Genbank gene 2482 3191 . + . ID=gene-C9F07_21735;Name=C9F07_21735;end_range=3191,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21735;partial=true PYKI01002227.1 Protein Homology CDS 2482 3191 . + 0 ID=cds-TGD56203.1;Parent=gene-C9F07_21735;Dbxref=NCBI_GP:TGD56203.1;Name=TGD56203.1;Note=catalyzes the transfer of alpha-xylosyl residue;end_range=3191,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458179.1;locus_tag=C9F07_21735;partial=true;product=alpha-xylosidase;protein_id=TGD56203.1;transl_table=11 ##sequence-region PYKI01000643.1 1 579 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000643.1 Genbank region 1 579 . + . ID=PYKI01000643.1:1..579;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000643.1 Genbank gene 1 579 . - . ID=gene-C9F07_05565;Name=C9F07_05565;end_range=579,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05565;partial=true;start_range=.,1 PYKI01000643.1 Protein Homology CDS 1 579 . - 1 ID=cds-TGE12620.1;Parent=gene-C9F07_05565;Dbxref=NCBI_GP:TGE12620.1;Name=TGE12620.1;end_range=579,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=C9F07_05565;partial=true;product=catalase-peroxidase;protein_id=TGE12620.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000129.1 1 578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000129.1 Genbank region 1 578 . + . ID=PYKI01000129.1:1..578;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000129.1 Genbank gene 1 538 . - . ID=gene-C9F07_00885;Name=C9F07_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00885;partial=true;start_range=.,1 PYKI01000129.1 Protein Homology CDS 1 538 . - 0 ID=cds-TGE30095.1;Parent=gene-C9F07_00885;Dbxref=NCBI_GP:TGE30095.1;Name=TGE30095.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=C9F07_00885;partial=true;product=3-oxoacyl-ACP synthase;protein_id=TGE30095.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003002.1 1 578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003002.1 Genbank region 1 578 . + . ID=PYKI01003002.1:1..578;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003002.1 Genbank pseudogene 56 466 . + . ID=gene-C9F07_30100;Name=C9F07_30100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30100;pseudo=true PYKI01003002.1 Protein Homology CDS 56 466 . + 0 ID=cds-C9F07_30100;Parent=gene-C9F07_30100;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455643.1;locus_tag=C9F07_30100;product=glucan biosynthesis protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001205.1 1 578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001205.1 Genbank region 1 578 . + . ID=PYKI01001205.1:1..578;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001205.1 Genbank gene 318 578 . - . ID=gene-C9F07_11295;Name=C9F07_11295;end_range=578,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11295;partial=true PYKI01001205.1 Protein Homology CDS 318 578 . - 0 ID=cds-TGD91509.1;Parent=gene-C9F07_11295;Dbxref=NCBI_GP:TGD91509.1;Name=TGD91509.1;end_range=578,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455358.1;locus_tag=C9F07_11295;partial=true;product=ATP-dependent RNA helicase RhlE;protein_id=TGD91509.1;transl_table=11 ##sequence-region PYKI01001553.1 1 578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001553.1 Genbank region 1 578 . + . ID=PYKI01001553.1:1..578;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001553.1 Genbank pseudogene 41 355 . - . ID=gene-C9F07_14890;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=pseudogene;locus_tag=C9F07_14890;pseudo=true PYKI01001553.1 Protein Homology CDS 41 355 . - 0 ID=cds-C9F07_14890;Parent=gene-C9F07_14890;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=moaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455345.1;locus_tag=C9F07_14890;product=cyclic pyranopterin monophosphate synthase MoaC;pseudo=true;transl_table=11 PYKI01001553.1 Genbank gene 358 578 . - . ID=gene-C9F07_14895;Name=C9F07_14895;end_range=578,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14895;partial=true PYKI01001553.1 Protein Homology CDS 358 578 . - 2 ID=cds-TGD74489.1;Parent=gene-C9F07_14895;Dbxref=NCBI_GP:TGD74489.1;Name=TGD74489.1;end_range=578,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=C9F07_14895;partial=true;product=molybdenum cofactor biosynthesis protein;protein_id=TGD74489.1;transl_table=11 ##sequence-region PYKI01002829.1 1 577 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002829.1 Genbank region 1 577 . + . ID=PYKI01002829.1:1..577;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002829.1 Genbank pseudogene 84 491 . + . ID=gene-C9F07_28305;Name=C9F07_28305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28305;pseudo=true PYKI01002829.1 Protein Homology CDS 84 491 . + 0 ID=cds-C9F07_28305;Parent=gene-C9F07_28305;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455329.1;locus_tag=C9F07_28305;product=imidazolonepropionase;pseudo=true;transl_table=11 ##sequence-region PYKI01002397.1 1 576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002397.1 Genbank region 1 576 . + . ID=PYKI01002397.1:1..576;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002397.1 Genbank gene 1 576 . + . ID=gene-C9F07_23600;Name=C9F07_23600;end_range=576,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23600;partial=true;start_range=.,1 PYKI01002397.1 Protein Homology CDS 1 576 . + 0 ID=cds-TGD52018.1;Parent=gene-C9F07_23600;Dbxref=NCBI_GP:TGD52018.1;Name=TGD52018.1;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms;end_range=576,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456868.1;locus_tag=C9F07_23600;partial=true;product=NADH-quinone oxidoreductase subunit C/D;protein_id=TGD52018.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001552.1 1 576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001552.1 Genbank region 1 576 . + . ID=PYKI01001552.1:1..576;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001552.1 Genbank pseudogene 136 513 . + . ID=gene-C9F07_14885;Name=C9F07_14885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14885;pseudo=true PYKI01001552.1 Protein Homology CDS 136 513 . + 0 ID=cds-C9F07_14885;Parent=gene-C9F07_14885;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456737.1;locus_tag=C9F07_14885;product=gentisate 1%2C2-dioxygenase;pseudo=true;transl_table=11 ##sequence-region PYKI01002575.1 1 576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002575.1 Genbank region 1 576 . + . ID=PYKI01002575.1:1..576;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002575.1 Genbank gene 1 494 . + . ID=gene-C9F07_25575;Name=C9F07_25575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25575;partial=true;start_range=.,1 PYKI01002575.1 Protein Homology CDS 1 494 . + 2 ID=cds-TGD49767.1;Parent=gene-C9F07_25575;Dbxref=NCBI_GP:TGD49767.1;Name=TGD49767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=C9F07_25575;partial=true;product=pyruvate kinase PykF;protein_id=TGD49767.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002572.1 1 576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002572.1 Genbank region 1 576 . + . ID=PYKI01002572.1:1..576;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002572.1 Genbank gene 1 576 . + . ID=gene-C9F07_25540;Name=C9F07_25540;end_range=576,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25540;partial=true;start_range=.,1 PYKI01002572.1 Protein Homology CDS 1 576 . + 0 ID=cds-TGD49783.1;Parent=gene-C9F07_25540;Dbxref=NCBI_GP:TGD49783.1;Name=TGD49783.1;end_range=576,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455642.1;locus_tag=C9F07_25540;partial=true;product=hypothetical protein;protein_id=TGD49783.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001733.1 1 3177 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001733.1 Genbank region 1 3177 . + . ID=PYKI01001733.1:1..3177;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001733.1 Genbank gene 1 789 . + . ID=gene-C9F07_16565;Name=C9F07_16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16565;partial=true;start_range=.,1 PYKI01001733.1 Protein Homology CDS 1 789 . + 0 ID=cds-TGD68677.1;Parent=gene-C9F07_16565;Dbxref=NCBI_GP:TGD68677.1;Name=TGD68677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=C9F07_16565;partial=true;product=conjugal transfer protein;protein_id=TGD68677.1;start_range=.,1;transl_table=11 PYKI01001733.1 Genbank gene 877 1875 . + . ID=gene-C9F07_16570;Name=C9F07_16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16570 PYKI01001733.1 Protein Homology CDS 877 1875 . + 0 ID=cds-TGD68678.1;Parent=gene-C9F07_16570;Dbxref=NCBI_GP:TGD68678.1;Name=TGD68678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=C9F07_16570;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=TGD68678.1;transl_table=11 PYKI01001733.1 Genbank gene 2043 2285 . + . ID=gene-C9F07_16575;Name=C9F07_16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16575 PYKI01001733.1 Protein Homology CDS 2043 2285 . + 0 ID=cds-TGD68679.1;Parent=gene-C9F07_16575;Dbxref=NCBI_GP:TGD68679.1;Name=TGD68679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458542.1;locus_tag=C9F07_16575;product=envelope stress response protein PspG;protein_id=TGD68679.1;transl_table=11 PYKI01001733.1 Genbank gene 2460 3177 . - . ID=gene-C9F07_16580;Name=C9F07_16580;end_range=3177,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16580;partial=true PYKI01001733.1 Protein Homology CDS 2460 3177 . - 1 ID=cds-TGD68680.1;Parent=gene-C9F07_16580;Dbxref=NCBI_GP:TGD68680.1;Name=TGD68680.1;end_range=3177,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458543.1;locus_tag=C9F07_16580;partial=true;product=quinone oxidoreductase;protein_id=TGD68680.1;transl_table=11 ##sequence-region PYKI01002933.1 1 576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002933.1 Genbank region 1 576 . + . ID=PYKI01002933.1:1..576;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002933.1 Genbank gene 1 576 . + . ID=gene-C9F07_29385;Name=C9F07_29385;end_range=576,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29385;partial=true;start_range=.,1 PYKI01002933.1 Protein Homology CDS 1 576 . + 0 ID=cds-TGD42816.1;Parent=gene-C9F07_29385;Dbxref=NCBI_GP:TGD42816.1;Name=TGD42816.1;end_range=576,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=C9F07_29385;partial=true;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=TGD42816.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002304.1 1 576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002304.1 Genbank region 1 576 . + . ID=PYKI01002304.1:1..576;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002304.1 Genbank pseudogene 57 576 . - . ID=gene-C9F07_22595;Name=C9F07_22595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22595;pseudo=true PYKI01002304.1 Protein Homology CDS 57 576 . - 1 ID=cds-C9F07_22595;Parent=gene-C9F07_22595;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458447.1;locus_tag=C9F07_22595;product=FKBP-type peptidyl-prolyl cis-trans isomerase;pseudo=true;transl_table=11 ##sequence-region PYKI01001765.1 1 575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001765.1 Genbank region 1 575 . + . ID=PYKI01001765.1:1..575;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001765.1 Genbank pseudogene 74 505 . - . ID=gene-C9F07_16945;Name=C9F07_16945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16945;pseudo=true PYKI01001765.1 Protein Homology CDS 74 505 . - 0 ID=cds-C9F07_16945;Parent=gene-C9F07_16945;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000721294.1;locus_tag=C9F07_16945;product=fimbrial protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000152.1 1 575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000152.1 Genbank region 1 575 . + . ID=PYKI01000152.1:1..575;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000152.1 Genbank gene 1 239 . + . ID=gene-C9F07_01015;Name=C9F07_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01015;partial=true;start_range=.,1 PYKI01000152.1 Protein Homology CDS 1 239 . + 2 ID=cds-TGE30072.1;Parent=gene-C9F07_01015;Dbxref=NCBI_GP:TGE30072.1;Name=TGE30072.1;Note=negative modulator of the initiation of chromosome replication;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308745.1;locus_tag=C9F07_01015;partial=true;product=replication initiation regulator SeqA;protein_id=TGE30072.1;start_range=.,1;transl_table=11 PYKI01000152.1 Genbank gene 264 575 . + . ID=gene-C9F07_01020;Name=C9F07_01020;end_range=575,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01020;partial=true PYKI01000152.1 Protein Homology CDS 264 575 . + 0 ID=cds-TGE30073.1;Parent=gene-C9F07_01020;Dbxref=NCBI_GP:TGE30073.1;Name=TGE30073.1;end_range=575,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=C9F07_01020;partial=true;product=phosphoglucomutase;protein_id=TGE30073.1;transl_table=11 ##sequence-region PYKI01001447.1 1 574 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001447.1 Genbank region 1 574 . + . ID=PYKI01001447.1:1..574;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001447.1 Genbank gene 110 346 . + . ID=gene-C9F07_13710;Name=C9F07_13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13710 PYKI01001447.1 Protein Homology CDS 110 346 . + 0 ID=cds-TGD83676.1;Parent=gene-C9F07_13710;Dbxref=NCBI_GP:TGD83676.1;Name=TGD83676.1;Note=major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006675846.1;locus_tag=C9F07_13710;product=murein lipoprotein;protein_id=TGD83676.1;transl_table=11 PYKI01001447.1 Genbank gene 378 574 . + . ID=gene-C9F07_13715;Name=C9F07_13715;end_range=574,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13715;partial=true PYKI01001447.1 Protein Homology CDS 378 574 . + 0 ID=cds-TGD83677.1;Parent=gene-C9F07_13715;Dbxref=NCBI_GP:TGD83677.1;Name=TGD83677.1;end_range=574,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460341.1;locus_tag=C9F07_13715;partial=true;product=hypothetical protein;protein_id=TGD83677.1;transl_table=11 ##sequence-region PYKI01000234.1 1 574 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000234.1 Genbank region 1 574 . + . ID=PYKI01000234.1:1..574;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000234.1 Genbank gene 63 452 . - . ID=gene-C9F07_01530;Name=C9F07_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01530 PYKI01000234.1 Protein Homology CDS 63 452 . - 0 ID=cds-TGE27873.1;Parent=gene-C9F07_01530;Dbxref=NCBI_GP:TGE27873.1;Name=TGE27873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457969.1;locus_tag=C9F07_01530;product=hypothetical protein;protein_id=TGE27873.1;transl_table=11 ##sequence-region PYKI01001386.1 1 573 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001386.1 Genbank region 1 573 . + . ID=PYKI01001386.1:1..573;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001386.1 Genbank pseudogene 1 523 . - . ID=gene-C9F07_13040;Name=C9F07_13040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13040;pseudo=true PYKI01001386.1 Protein Homology CDS 1 523 . - 0 ID=cds-C9F07_13040;Parent=gene-C9F07_13040;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456681.1;locus_tag=C9F07_13040;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001998.1 1 572 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001998.1 Genbank region 1 572 . + . ID=PYKI01001998.1:1..572;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001998.1 Genbank gene 1 572 . - . ID=gene-C9F07_19270;Name=C9F07_19270;end_range=572,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19270;partial=true;start_range=.,1 PYKI01001998.1 Protein Homology CDS 1 572 . - 1 ID=cds-TGD60160.1;Parent=gene-C9F07_19270;Dbxref=NCBI_GP:TGD60160.1;Name=TGD60160.1;end_range=572,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458113.1;locus_tag=C9F07_19270;partial=true;product=hypothetical protein;protein_id=TGD60160.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001704.1 1 572 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001704.1 Genbank region 1 572 . + . ID=PYKI01001704.1:1..572;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001704.1 Genbank pseudogene 1 507 . + . ID=gene-C9F07_16250;Name=C9F07_16250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16250;pseudo=true PYKI01001704.1 Protein Homology CDS 1 507 . + 0 ID=cds-C9F07_16250;Parent=gene-C9F07_16250;Note=Required for efficient pilin antigenic variation%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=C9F07_16250;product=recombination-associated protein RdgC;pseudo=true;transl_table=11 ##sequence-region PYKI01000598.1 1 572 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000598.1 Genbank region 1 572 . + . ID=PYKI01000598.1:1..572;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000598.1 Genbank gene 1 394 . - . ID=gene-C9F07_05120;Name=C9F07_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05120;partial=true;start_range=.,1 PYKI01000598.1 Protein Homology CDS 1 394 . - 0 ID=cds-TGE14097.1;Parent=gene-C9F07_05120;Dbxref=NCBI_GP:TGE14097.1;Name=TGE14097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=C9F07_05120;partial=true;product=hypothetical protein;protein_id=TGE14097.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002622.1 1 3177 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002622.1 Genbank region 1 3177 . + . ID=PYKI01002622.1:1..3177;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002622.1 Genbank pseudogene 1 255 . + . ID=gene-C9F07_26080;Name=C9F07_26080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26080;pseudo=true PYKI01002622.1 Protein Homology CDS 1 255 . + 0 ID=cds-C9F07_26080;Parent=gene-C9F07_26080;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447926.1;locus_tag=C9F07_26080;product=MFS transporter;pseudo=true;transl_table=11 PYKI01002622.1 Genbank pseudogene 262 660 . + . ID=gene-C9F07_26085;Name=C9F07_26085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26085;pseudo=true PYKI01002622.1 Protein Homology CDS 262 660 . + 0 ID=cds-C9F07_26085;Parent=gene-C9F07_26085;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001638008.1;locus_tag=C9F07_26085;product=MFS transporter;pseudo=true;transl_table=11 PYKI01002622.1 Genbank gene 804 2270 . + . ID=gene-C9F07_26090;Name=C9F07_26090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26090 PYKI01002622.1 Protein Homology CDS 804 2270 . + 0 ID=cds-TGD49498.1;Parent=gene-C9F07_26090;Dbxref=NCBI_GP:TGD49498.1;Name=TGD49498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455972.1;locus_tag=C9F07_26090;product=D-mannonate oxidoreductase;protein_id=TGD49498.1;transl_table=11 PYKI01002622.1 Genbank gene 2337 2540 . - . ID=gene-C9F07_26095;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=C9F07_26095 PYKI01002622.1 Protein Homology CDS 2337 2540 . - 0 ID=cds-TGD49499.1;Parent=gene-C9F07_26095;Dbxref=NCBI_GP:TGD49499.1;Name=TGD49499.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455971.1;locus_tag=C9F07_26095;product=putative selenium delivery protein YdfZ;protein_id=TGD49499.1;transl_table=11 PYKI01002622.1 Genbank gene 2721 3177 . - . ID=gene-C9F07_26100;Name=C9F07_26100;end_range=3177,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26100;partial=true PYKI01002622.1 Protein Homology CDS 2721 3177 . - 1 ID=cds-TGD49500.1;Parent=gene-C9F07_26100;Dbxref=NCBI_GP:TGD49500.1;Name=TGD49500.1;end_range=3177,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455970.1;locus_tag=C9F07_26100;partial=true;product=GntR family transcriptional regulator;protein_id=TGD49500.1;transl_table=11 ##sequence-region PYKI01000348.1 1 572 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000348.1 Genbank region 1 572 . + . ID=PYKI01000348.1:1..572;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000348.1 Genbank pseudogene 208 572 . - . ID=gene-C9F07_02585;Name=C9F07_02585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02585;pseudo=true PYKI01000348.1 Protein Homology CDS 208 572 . - 2 ID=cds-C9F07_02585;Parent=gene-C9F07_02585;Note=involved in the transporte of L-asparagine%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455912.1;locus_tag=C9F07_02585;product=amino acid permease;pseudo=true;transl_table=11 ##sequence-region PYKI01000974.1 1 572 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000974.1 Genbank region 1 572 . + . ID=PYKI01000974.1:1..572;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000974.1 Genbank gene 1 226 . - . ID=gene-C9F07_08885;Name=C9F07_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08885;partial=true;start_range=.,1 PYKI01000974.1 Protein Homology CDS 1 226 . - 0 ID=cds-TGD99981.1;Parent=gene-C9F07_08885;Dbxref=NCBI_GP:TGD99981.1;Name=TGD99981.1;Note=catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457228.1;locus_tag=C9F07_08885;partial=true;product=sorbitol-6-phosphate 2-dehydrogenase;protein_id=TGD99981.1;start_range=.,1;transl_table=11 PYKI01000974.1 Genbank gene 238 572 . - . ID=gene-C9F07_08890;Name=C9F07_08890;end_range=572,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08890;partial=true PYKI01000974.1 Protein Homology CDS 238 572 . - 2 ID=cds-TGD99982.1;Parent=gene-C9F07_08890;Dbxref=NCBI_GP:TGD99982.1;Name=TGD99982.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;end_range=572,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=C9F07_08890;partial=true;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=TGD99982.1;transl_table=11 ##sequence-region PYKI01002712.1 1 572 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002712.1 Genbank region 1 572 . + . ID=PYKI01002712.1:1..572;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002712.1 Genbank gene 1 351 . + . ID=gene-C9F07_27040;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=C9F07_27040;partial=true;start_range=.,1 PYKI01002712.1 Protein Homology CDS 1 351 . + 0 ID=cds-TGD47867.1;Parent=gene-C9F07_27040;Dbxref=NCBI_GP:TGD47867.1;Name=TGD47867.1;gbkey=CDS;gene=rimM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=C9F07_27040;partial=true;product=16S rRNA processing protein RimM;protein_id=TGD47867.1;start_range=.,1;transl_table=11 PYKI01002712.1 Genbank gene 396 572 . + . ID=gene-C9F07_27045;Name=C9F07_27045;end_range=572,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27045;partial=true PYKI01002712.1 Protein Homology CDS 396 572 . + 0 ID=cds-TGD47868.1;Parent=gene-C9F07_27045;Dbxref=NCBI_GP:TGD47868.1;Name=TGD47868.1;end_range=572,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457144.1;locus_tag=C9F07_27045;partial=true;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=TGD47868.1;transl_table=11 ##sequence-region PYKI01002958.1 1 570 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002958.1 Genbank region 1 570 . + . ID=PYKI01002958.1:1..570;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002958.1 Genbank gene 1 570 . + . ID=gene-C9F07_29640;Name=C9F07_29640;end_range=570,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29640;partial=true;start_range=.,1 PYKI01002958.1 Protein Homology CDS 1 570 . + 2 ID=cds-TGD41983.1;Parent=gene-C9F07_29640;Dbxref=NCBI_GP:TGD41983.1;Name=TGD41983.1;Note=catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols;end_range=570,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=C9F07_29640;partial=true;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=TGD41983.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002655.1 1 569 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002655.1 Genbank region 1 569 . + . ID=PYKI01002655.1:1..569;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002655.1 Genbank pseudogene 75 569 . + . ID=gene-C9F07_26425;Name=C9F07_26425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26425;pseudo=true PYKI01002655.1 Protein Homology CDS 75 569 . + 0 ID=cds-C9F07_26425;Parent=gene-C9F07_26425;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461859.1;locus_tag=C9F07_26425;product=subtype I-E CRISPR-associated endonuclease Cas1;pseudo=true;transl_table=11 ##sequence-region PYKI01002255.1 1 569 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002255.1 Genbank region 1 569 . + . ID=PYKI01002255.1:1..569;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002255.1 Genbank pseudogene 1 532 . + . ID=gene-C9F07_22080;Name=C9F07_22080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22080;pseudo=true PYKI01002255.1 Protein Homology CDS 1 532 . + 1 ID=cds-C9F07_22080;Parent=gene-C9F07_22080;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457015.1;locus_tag=C9F07_22080;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002724.1 1 569 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002724.1 Genbank region 1 569 . + . ID=PYKI01002724.1:1..569;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002724.1 Genbank gene 1 569 . + . ID=gene-C9F07_27200;Name=C9F07_27200;end_range=569,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27200;partial=true;start_range=.,1 PYKI01002724.1 Protein Homology CDS 1 569 . + 0 ID=cds-TGD47549.1;Parent=gene-C9F07_27200;Dbxref=NCBI_GP:TGD47549.1;Name=TGD47549.1;end_range=569,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457815.1;locus_tag=C9F07_27200;partial=true;product=uroporphyrinogen-III C-methyltransferase;protein_id=TGD47549.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003037.1 1 568 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003037.1 Genbank region 1 568 . + . ID=PYKI01003037.1:1..568;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003037.1 Genbank gene 1 568 . - . ID=gene-C9F07_30495;Name=C9F07_30495;end_range=568,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30495;partial=true;start_range=.,1 PYKI01003037.1 Protein Homology CDS 1 568 . - 2 ID=cds-TGD41057.1;Parent=gene-C9F07_30495;Dbxref=NCBI_GP:TGD41057.1;Name=TGD41057.1;end_range=568,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=C9F07_30495;partial=true;product=ABC transporter permease;protein_id=TGD41057.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002792.1 1 567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002792.1 Genbank region 1 567 . + . ID=PYKI01002792.1:1..567;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002792.1 Genbank gene 277 567 . + . ID=gene-C9F07_27915;Name=C9F07_27915;end_range=567,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27915;partial=true PYKI01002792.1 Protein Homology CDS 277 567 . + 0 ID=cds-TGD46065.1;Parent=gene-C9F07_27915;Dbxref=NCBI_GP:TGD46065.1;Name=TGD46065.1;end_range=567,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=C9F07_27915;partial=true;product=autotransporter domain-containing esterase;protein_id=TGD46065.1;transl_table=11 ##sequence-region PYKI01001554.1 1 567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001554.1 Genbank region 1 567 . + . ID=PYKI01001554.1:1..567;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001554.1 Genbank gene 308 567 . + . ID=gene-C9F07_14900;Name=C9F07_14900;end_range=567,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14900;partial=true PYKI01001554.1 Protein Homology CDS 308 567 . + 0 ID=cds-TGD74439.1;Parent=gene-C9F07_14900;Dbxref=NCBI_GP:TGD74439.1;Name=TGD74439.1;end_range=567,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456485.1;locus_tag=C9F07_14900;partial=true;product=methyl-accepting chemotaxis protein;protein_id=TGD74439.1;transl_table=11 ##sequence-region PYKI01003333.1 1 3176 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003333.1 Genbank region 1 3176 . + . ID=PYKI01003333.1:1..3176;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003333.1 Genbank gene 1 899 . - . ID=gene-C9F07_33530;Name=C9F07_33530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33530;partial=true;start_range=.,1 PYKI01003333.1 Protein Homology CDS 1 899 . - 0 ID=cds-TGD35098.1;Parent=gene-C9F07_33530;Dbxref=NCBI_GP:TGD35098.1;Name=TGD35098.1;Note=catalyzes the transfer of heptose(III) to heptose(II) in the lipopolysaccharide inner core;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=C9F07_33530;partial=true;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=TGD35098.1;start_range=.,1;transl_table=11 PYKI01003333.1 Genbank gene 1308 2585 . + . ID=gene-C9F07_33535;Name=C9F07_33535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33535 PYKI01003333.1 Protein Homology CDS 1308 2585 . + 0 ID=cds-TGD35096.1;Parent=gene-C9F07_33535;Dbxref=NCBI_GP:TGD35096.1;Name=TGD35096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=C9F07_33535;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=TGD35096.1;transl_table=11 PYKI01003333.1 Genbank gene 2594 3073 . + . ID=gene-C9F07_33540;Name=C9F07_33540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33540 PYKI01003333.1 Protein Homology CDS 2594 3073 . + 0 ID=cds-TGD35097.1;Parent=gene-C9F07_33540;Dbxref=NCBI_GP:TGD35097.1;Name=TGD35097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458201.1;locus_tag=C9F07_33540;product=phosphopantetheine adenylyltransferase;protein_id=TGD35097.1;transl_table=11 PYKI01003333.1 Genbank gene 3101 3176 . - . ID=gene-C9F07_33545;Name=C9F07_33545;end_range=3176,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33545;partial=true PYKI01003333.1 Protein Homology CDS 3101 3176 . - 1 ID=cds-TGD35099.1;Parent=gene-C9F07_33545;Dbxref=NCBI_GP:TGD35099.1;Name=TGD35099.1;end_range=3176,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458200.1;locus_tag=C9F07_33545;partial=true;product=formamidopyrimidine-DNA glycosylase;protein_id=TGD35099.1;transl_table=11 ##sequence-region PYKI01001385.1 1 567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001385.1 Genbank region 1 567 . + . ID=PYKI01001385.1:1..567;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001385.1 Genbank gene 1 567 . - . ID=gene-C9F07_13035;Name=C9F07_13035;end_range=567,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13035;partial=true;start_range=.,1 PYKI01001385.1 Protein Homology CDS 1 567 . - 2 ID=cds-TGD84366.1;Parent=gene-C9F07_13035;Dbxref=NCBI_GP:TGD84366.1;Name=TGD84366.1;end_range=567,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=C9F07_13035;partial=true;product=fimbrial protein;protein_id=TGD84366.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000067.1 1 566 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000067.1 Genbank region 1 566 . + . ID=PYKI01000067.1:1..566;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000067.1 Genbank pseudogene 1 467 . + . ID=gene-C9F07_00415;Name=C9F07_00415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00415;pseudo=true PYKI01000067.1 Protein Homology CDS 1 467 . + 2 ID=cds-C9F07_00415;Parent=gene-C9F07_00415;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458353.1;locus_tag=C9F07_00415;product=RNA polymerase sigma factor RpoH;pseudo=true;transl_table=11 ##sequence-region PYKI01002853.1 1 566 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002853.1 Genbank region 1 566 . + . ID=PYKI01002853.1:1..566;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002853.1 Genbank pseudogene 62 259 . - . ID=gene-C9F07_28510;Name=C9F07_28510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28510;pseudo=true PYKI01002853.1 Protein Homology CDS 62 259 . - 0 ID=cds-C9F07_28510;Parent=gene-C9F07_28510;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456211.1;locus_tag=C9F07_28510;product=NTP pyrophosphohydrolase;pseudo=true;transl_table=11 PYKI01002853.1 Genbank gene 332 566 . - . ID=gene-C9F07_28515;Name=C9F07_28515;end_range=566,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28515;partial=true PYKI01002853.1 Protein Homology CDS 332 566 . - 1 ID=cds-TGD45530.1;Parent=gene-C9F07_28515;Dbxref=NCBI_GP:TGD45530.1;Name=TGD45530.1;Note=removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction;end_range=566,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456210.1;locus_tag=C9F07_28515;partial=true;product=exodeoxyribonuclease III;protein_id=TGD45530.1;transl_table=11 ##sequence-region PYKI01000363.1 1 565 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000363.1 Genbank region 1 565 . + . ID=PYKI01000363.1:1..565;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000363.1 Genbank pseudogene 22 426 . + . ID=gene-C9F07_02735;Name=C9F07_02735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02735;pseudo=true PYKI01000363.1 Protein Homology CDS 22 426 . + 0 ID=cds-C9F07_02735;Parent=gene-C9F07_02735;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=C9F07_02735;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002468.1 1 565 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002468.1 Genbank region 1 565 . + . ID=PYKI01002468.1:1..565;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002468.1 Genbank gene 1 565 . - . ID=gene-C9F07_24375;Name=C9F07_24375;end_range=565,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24375;partial=true;start_range=.,1 PYKI01002468.1 Protein Homology CDS 1 565 . - 0 ID=cds-TGD50652.1;Parent=gene-C9F07_24375;Dbxref=NCBI_GP:TGD50652.1;Name=TGD50652.1;end_range=565,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=C9F07_24375;partial=true;product=hypothetical protein;protein_id=TGD50652.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003467.1 1 565 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003467.1 Genbank region 1 565 . + . ID=PYKI01003467.1:1..565;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003467.1 Genbank gene 1 565 . - . ID=gene-C9F07_34855;Name=C9F07_34855;end_range=565,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34855;partial=true;start_range=.,1 PYKI01003467.1 Protein Homology CDS 1 565 . - 2 ID=cds-TGD32909.1;Parent=gene-C9F07_34855;Dbxref=NCBI_GP:TGD32909.1;Name=TGD32909.1;end_range=565,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455618.1;locus_tag=C9F07_34855;partial=true;product=hypothetical protein;protein_id=TGD32909.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001610.1 1 564 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001610.1 Genbank region 1 564 . + . ID=PYKI01001610.1:1..564;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001610.1 Genbank gene 1 564 . + . ID=gene-C9F07_15355;Name=C9F07_15355;end_range=564,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15355;partial=true;start_range=.,1 PYKI01001610.1 Protein Homology CDS 1 564 . + 2 ID=cds-TGD71010.1;Parent=gene-C9F07_15355;Dbxref=NCBI_GP:TGD71010.1;Name=TGD71010.1;end_range=564,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457015.1;locus_tag=C9F07_15355;partial=true;product=hydrophobe/amphiphile efflux-1 family RND transporter;protein_id=TGD71010.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001983.1 1 564 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001983.1 Genbank region 1 564 . + . ID=PYKI01001983.1:1..564;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001983.1 Genbank pseudogene 80 529 . - . ID=gene-C9F07_19125;Name=C9F07_19125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19125;pseudo=true PYKI01001983.1 Protein Homology CDS 80 529 . - 0 ID=cds-C9F07_19125;Parent=gene-C9F07_19125;Note=Cir%3B FeuA%3B CirA%3B receptor protein for siderophores (colicin IA%2C IB and V) and microcins (E492%2C H47%2C and M)%3B TonB-dependent%3B able to transport monomers%2C dimer%2C and linear trimers of 2%2C3-dihydorxybenzoylserine%3B outer membrane protein%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456757.1;locus_tag=C9F07_19125;product=catecholate siderophore receptor CirA;pseudo=true;transl_table=11 ##sequence-region PYKI01001912.1 1 564 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001912.1 Genbank region 1 564 . + . ID=PYKI01001912.1:1..564;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001912.1 Genbank gene 235 564 . - . ID=gene-C9F07_18415;Name=C9F07_18415;end_range=564,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18415;partial=true PYKI01001912.1 Protein Homology CDS 235 564 . - 0 ID=cds-TGD61230.1;Parent=gene-C9F07_18415;Dbxref=NCBI_GP:TGD61230.1;Name=TGD61230.1;Note=catalyzes the formation of pyruvate from serine;end_range=564,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457628.1;locus_tag=C9F07_18415;partial=true;product=L-serine ammonia-lyase;protein_id=TGD61230.1;transl_table=11 ##sequence-region PYKI01002011.1 1 564 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002011.1 Genbank region 1 564 . + . ID=PYKI01002011.1:1..564;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002011.1 Genbank gene 78 564 . + . ID=gene-C9F07_19400;Name=C9F07_19400;end_range=564,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19400;partial=true PYKI01002011.1 Protein Homology CDS 78 564 . + 0 ID=cds-TGD60107.1;Parent=gene-C9F07_19400;Dbxref=NCBI_GP:TGD60107.1;Name=TGD60107.1;end_range=564,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=C9F07_19400;partial=true;product=undecaprenyl-diphosphate phosphatase;protein_id=TGD60107.1;transl_table=11 ##sequence-region PYKI01000731.1 1 3162 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000731.1 Genbank region 1 3162 . + . ID=PYKI01000731.1:1..3162;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000731.1 Genbank gene 80 1369 . - . ID=gene-C9F07_06420;Name=C9F07_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06420 PYKI01000731.1 Protein Homology CDS 80 1369 . - 0 ID=cds-TGE10973.1;Parent=gene-C9F07_06420;Dbxref=NCBI_GP:TGE10973.1;Name=TGE10973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455335.1;locus_tag=C9F07_06420;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=TGE10973.1;transl_table=11 PYKI01000731.1 Genbank gene 1456 2496 . + . ID=gene-C9F07_06425;Name=C9F07_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06425 PYKI01000731.1 Protein Homology CDS 1456 2496 . + 0 ID=cds-TGE10971.1;Parent=gene-C9F07_06425;Dbxref=NCBI_GP:TGE10971.1;Name=TGE10971.1;Note=catalyzes the formation of biotin from dethiobiotin;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455336.1;locus_tag=C9F07_06425;product=biotin synthase;protein_id=TGE10971.1;transl_table=11 PYKI01000731.1 Genbank gene 2493 3162 . + . ID=gene-C9F07_06430;Name=C9F07_06430;end_range=3162,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06430;partial=true PYKI01000731.1 Protein Homology CDS 2493 3162 . + 0 ID=cds-TGE10972.1;Parent=gene-C9F07_06430;Dbxref=NCBI_GP:TGE10972.1;Name=TGE10972.1;Note=catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine;end_range=3162,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455337.1;locus_tag=C9F07_06430;partial=true;product=8-amino-7-oxononanoate synthase;protein_id=TGE10972.1;transl_table=11 ##sequence-region PYKI01001960.1 1 563 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001960.1 Genbank region 1 563 . + . ID=PYKI01001960.1:1..563;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001960.1 Genbank gene 1 563 . + . ID=gene-C9F07_18925;Name=C9F07_18925;end_range=563,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18925;partial=true;start_range=.,1 PYKI01001960.1 Protein Homology CDS 1 563 . + 0 ID=cds-TGD60409.1;Parent=gene-C9F07_18925;Dbxref=NCBI_GP:TGD60409.1;Name=TGD60409.1;Note=catalyzes the formation of pyruvate from serine;end_range=563,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=C9F07_18925;partial=true;product=L-serine ammonia-lyase;protein_id=TGD60409.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002140.1 1 563 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002140.1 Genbank region 1 563 . + . ID=PYKI01002140.1:1..563;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002140.1 Genbank gene 217 318 . + . ID=gene-C9F07_20750;Name=C9F07_20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20750 PYKI01002140.1 Protein Homology CDS 217 318 . + 0 ID=cds-TGD57815.1;Parent=gene-C9F07_20750;Dbxref=NCBI_GP:TGD57815.1;Name=TGD57815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=C9F07_20750;product=hypothetical protein;protein_id=TGD57815.1;transl_table=11 PYKI01002140.1 Genbank gene 353 563 . + . ID=gene-C9F07_20755;Name=C9F07_20755;end_range=563,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20755;partial=true PYKI01002140.1 Protein Homology CDS 353 563 . + 0 ID=cds-TGD57816.1;Parent=gene-C9F07_20755;Dbxref=NCBI_GP:TGD57816.1;Name=TGD57816.1;end_range=563,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458511.1;locus_tag=C9F07_20755;partial=true;product=DUF2058 domain-containing protein;protein_id=TGD57816.1;transl_table=11 ##sequence-region PYKI01002370.1 1 563 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002370.1 Genbank region 1 563 . + . ID=PYKI01002370.1:1..563;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002370.1 Genbank gene 1 522 . + . ID=gene-C9F07_23305;Name=C9F07_23305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23305;partial=true;start_range=.,1 PYKI01002370.1 Protein Homology CDS 1 522 . + 0 ID=cds-TGD52750.1;Parent=gene-C9F07_23305;Dbxref=NCBI_GP:TGD52750.1;Name=TGD52750.1;Note=catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459414.1;locus_tag=C9F07_23305;partial=true;product=thiamine-phosphate kinase;protein_id=TGD52750.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001434.1 1 563 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001434.1 Genbank region 1 563 . + . ID=PYKI01001434.1:1..563;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001434.1 Genbank gene 1 563 . + . ID=gene-C9F07_13580;Name=fruK;end_range=563,.;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=C9F07_13580;partial=true;start_range=.,1 PYKI01001434.1 Protein Homology CDS 1 563 . + 0 ID=cds-TGD83704.1;Parent=gene-C9F07_13580;Dbxref=NCBI_GP:TGD83704.1;Name=TGD83704.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;end_range=563,.;gbkey=CDS;gene=fruK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456763.1;locus_tag=C9F07_13580;partial=true;product=1-phosphofructokinase;protein_id=TGD83704.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003040.1 1 563 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003040.1 Genbank region 1 563 . + . ID=PYKI01003040.1:1..563;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003040.1 Genbank pseudogene 58 563 . + . ID=gene-C9F07_30525;Name=C9F07_30525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30525;pseudo=true PYKI01003040.1 Protein Homology CDS 58 563 . + 0 ID=cds-C9F07_30525;Parent=gene-C9F07_30525;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457936.1;locus_tag=C9F07_30525;product=argininosuccinate lyase;pseudo=true;transl_table=11 ##sequence-region PYKI01000714.1 1 563 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000714.1 Genbank region 1 563 . + . ID=PYKI01000714.1:1..563;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000714.1 Genbank gene 1 563 . - . ID=gene-C9F07_06265;Name=C9F07_06265;end_range=563,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06265;partial=true;start_range=.,1 PYKI01000714.1 Protein Homology CDS 1 563 . - 1 ID=cds-TGE11293.1;Parent=gene-C9F07_06265;Dbxref=NCBI_GP:TGE11293.1;Name=TGE11293.1;end_range=563,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457468.1;locus_tag=C9F07_06265;partial=true;product=phosphoglycerate kinase;protein_id=TGE11293.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002154.1 1 563 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002154.1 Genbank region 1 563 . + . ID=PYKI01002154.1:1..563;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002154.1 Genbank gene 1 174 . - . ID=gene-C9F07_20920;Name=C9F07_20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20920;partial=true;start_range=.,1 PYKI01002154.1 Protein Homology CDS 1 174 . - 0 ID=cds-TGD57451.1;Parent=gene-C9F07_20920;Dbxref=NCBI_GP:TGD57451.1;Name=TGD57451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309886.1;locus_tag=C9F07_20920;partial=true;product=exoribonuclease II;protein_id=TGD57451.1;start_range=.,1;transl_table=11 PYKI01002154.1 Genbank gene 263 563 . - . ID=gene-C9F07_20925;Name=C9F07_20925;end_range=563,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20925;partial=true PYKI01002154.1 Protein Homology CDS 263 563 . - 1 ID=cds-TGD57452.1;Parent=gene-C9F07_20925;Dbxref=NCBI_GP:TGD57452.1;Name=TGD57452.1;end_range=563,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000434200.1;locus_tag=C9F07_20925;partial=true;product=hypothetical protein;protein_id=TGD57452.1;transl_table=11 ##sequence-region PYKI01002990.1 1 562 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002990.1 Genbank region 1 562 . + . ID=PYKI01002990.1:1..562;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002990.1 Genbank gene 1 562 . - . ID=gene-C9F07_30010;Name=C9F07_30010;end_range=562,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30010;partial=true;start_range=.,1 PYKI01002990.1 Protein Homology CDS 1 562 . - 1 ID=cds-TGD41355.1;Parent=gene-C9F07_30010;Dbxref=NCBI_GP:TGD41355.1;Name=TGD41355.1;end_range=562,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455235.1;locus_tag=C9F07_30010;partial=true;product=apolipoprotein N-acyltransferase;protein_id=TGD41355.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001247.1 1 562 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001247.1 Genbank region 1 562 . + . ID=PYKI01001247.1:1..562;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001247.1 Genbank pseudogene 75 562 . - . ID=gene-C9F07_11630;Name=recD;gbkey=Gene;gene=recD;gene_biotype=pseudogene;locus_tag=C9F07_11630;pseudo=true PYKI01001247.1 Protein Homology CDS 75 562 . - 2 ID=cds-C9F07_11630;Parent=gene-C9F07_11630;Note=helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=recD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457386.1;locus_tag=C9F07_11630;product=exodeoxyribonuclease V subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKI01002892.1 1 560 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002892.1 Genbank region 1 560 . + . ID=PYKI01002892.1:1..560;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002892.1 Genbank pseudogene 1 560 . - . ID=gene-C9F07_28965;Name=C9F07_28965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28965;pseudo=true PYKI01002892.1 Protein Homology CDS 1 560 . - 0 ID=cds-C9F07_28965;Parent=gene-C9F07_28965;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456160.1;locus_tag=C9F07_28965;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001677.1 1 3154 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001677.1 Genbank region 1 3154 . + . ID=PYKI01001677.1:1..3154;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001677.1 Genbank pseudogene 85 474 . + . ID=gene-C9F07_16025;Name=C9F07_16025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16025;pseudo=true PYKI01001677.1 Protein Homology CDS 85 474 . + 0 ID=cds-C9F07_16025;Parent=gene-C9F07_16025;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=C9F07_16025;product=quinolinate synthase;pseudo=true;transl_table=11 PYKI01001677.1 Genbank gene 499 1218 . + . ID=gene-C9F07_16030;Name=C9F07_16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16030 PYKI01001677.1 Protein Homology CDS 499 1218 . + 0 ID=cds-TGD70087.1;Parent=gene-C9F07_16030;Dbxref=NCBI_GP:TGD70087.1;Name=TGD70087.1;Note=involved in nicotinamide riboside transport;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=C9F07_16030;product=nicotinamide riboside transporter PnuC;protein_id=TGD70087.1;transl_table=11 PYKI01001677.1 Genbank gene 1215 2153 . - . ID=gene-C9F07_16035;Name=C9F07_16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16035 PYKI01001677.1 Protein Homology CDS 1215 2153 . - 0 ID=cds-TGD70088.1;Parent=gene-C9F07_16035;Dbxref=NCBI_GP:TGD70088.1;Name=TGD70088.1;Note=involved in zinc efflux across the cytoplasmic membrane;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=C9F07_16035;product=cation transporter;protein_id=TGD70088.1;transl_table=11 PYKI01001677.1 Genbank gene 2264 2650 . - . ID=gene-C9F07_16040;Name=C9F07_16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16040 PYKI01001677.1 Protein Homology CDS 2264 2650 . - 0 ID=cds-TGD70089.1;Parent=gene-C9F07_16040;Dbxref=NCBI_GP:TGD70089.1;Name=TGD70089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455310.1;locus_tag=C9F07_16040;product=hypothetical protein;protein_id=TGD70089.1;transl_table=11 PYKI01001677.1 Genbank gene 2970 3154 . + . ID=gene-C9F07_16045;Name=C9F07_16045;end_range=3154,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16045;partial=true PYKI01001677.1 Protein Homology CDS 2970 3154 . + 0 ID=cds-TGD70090.1;Parent=gene-C9F07_16045;Dbxref=NCBI_GP:TGD70090.1;Name=TGD70090.1;end_range=3154,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455311.1;locus_tag=C9F07_16045;partial=true;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=TGD70090.1;transl_table=11 ##sequence-region PYKI01002472.1 1 560 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002472.1 Genbank region 1 560 . + . ID=PYKI01002472.1:1..560;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002472.1 Genbank gene 1 529 . + . ID=gene-C9F07_24415;Name=C9F07_24415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24415;partial=true;start_range=.,1 PYKI01002472.1 Protein Homology CDS 1 529 . + 1 ID=cds-TGD50589.1;Parent=gene-C9F07_24415;Dbxref=NCBI_GP:TGD50589.1;Name=TGD50589.1;Note=Zn-dependent%3B NAD(P)-binding%3B catalyzes the formation of tagatose-6-phosphate from galactitol-1-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=C9F07_24415;partial=true;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=TGD50589.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001183.1 1 559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001183.1 Genbank region 1 559 . + . ID=PYKI01001183.1:1..559;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001183.1 Genbank gene 1 559 . + . ID=gene-C9F07_11060;Name=C9F07_11060;end_range=559,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11060;partial=true;start_range=.,1 PYKI01001183.1 Protein Homology CDS 1 559 . + 0 ID=cds-TGD92256.1;Parent=gene-C9F07_11060;Dbxref=NCBI_GP:TGD92256.1;Name=TGD92256.1;end_range=559,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000355353.1;locus_tag=C9F07_11060;partial=true;product=transglycosylase;protein_id=TGD92256.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000879.1 1 559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000879.1 Genbank region 1 559 . + . ID=PYKI01000879.1:1..559;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000879.1 Genbank pseudogene 41 559 . - . ID=gene-C9F07_08070;Name=C9F07_08070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08070;pseudo=true PYKI01000879.1 Protein Homology CDS 41 559 . - 0 ID=cds-C9F07_08070;Parent=gene-C9F07_08070;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933952.1;locus_tag=C9F07_08070;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000956.1 1 559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000956.1 Genbank region 1 559 . + . ID=PYKI01000956.1:1..559;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000956.1 Genbank gene 1 320 . - . ID=gene-C9F07_08725;Name=C9F07_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08725;partial=true;start_range=.,1 PYKI01000956.1 Protein Homology CDS 1 320 . - 0 ID=cds-TGE01366.1;Parent=gene-C9F07_08725;Dbxref=NCBI_GP:TGE01366.1;Name=TGE01366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455377.1;locus_tag=C9F07_08725;partial=true;product=hypothetical protein;protein_id=TGE01366.1;start_range=.,1;transl_table=11 PYKI01000956.1 Genbank gene 326 559 . - . ID=gene-C9F07_08730;Name=C9F07_08730;end_range=559,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08730;partial=true PYKI01000956.1 Protein Homology CDS 326 559 . - 0 ID=cds-TGE01365.1;Parent=gene-C9F07_08730;Dbxref=NCBI_GP:TGE01365.1;Name=TGE01365.1;end_range=559,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=C9F07_08730;partial=true;product=glycyl-radical enzyme activating protein;protein_id=TGE01365.1;transl_table=11 ##sequence-region PYKI01000235.1 1 558 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000235.1 Genbank region 1 558 . + . ID=PYKI01000235.1:1..558;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000235.1 Genbank pseudogene 51 215 . - . ID=gene-C9F07_01535;Name=C9F07_01535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01535;pseudo=true PYKI01000235.1 Protein Homology CDS 51 215 . - 0 ID=cds-C9F07_01535;Parent=gene-C9F07_01535;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=C9F07_01535;product=signal recognition particle protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000461.1 1 558 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000461.1 Genbank region 1 558 . + . ID=PYKI01000461.1:1..558;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000461.1 Genbank gene 1 558 . + . ID=gene-C9F07_03630;Name=C9F07_03630;end_range=558,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03630;partial=true;start_range=.,1 PYKI01000461.1 Protein Homology CDS 1 558 . + 0 ID=cds-TGE19769.1;Parent=gene-C9F07_03630;Dbxref=NCBI_GP:TGE19769.1;Name=TGE19769.1;end_range=558,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457051.1;locus_tag=C9F07_03630;partial=true;product=ribosome biogenesis GTPase Der;protein_id=TGE19769.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002514.1 1 557 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002514.1 Genbank region 1 557 . + . ID=PYKI01002514.1:1..557;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002514.1 Genbank gene 222 557 . - . ID=gene-C9F07_24915;Name=C9F07_24915;end_range=557,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24915;partial=true PYKI01002514.1 Protein Homology CDS 222 557 . - 0 ID=cds-TGD50163.1;Parent=gene-C9F07_24915;Dbxref=NCBI_GP:TGD50163.1;Name=TGD50163.1;end_range=557,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458598.1;locus_tag=C9F07_24915;partial=true;product=melibiose:sodium transporter MelB;protein_id=TGD50163.1;transl_table=11 ##sequence-region PYKI01003104.1 1 557 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003104.1 Genbank region 1 557 . + . ID=PYKI01003104.1:1..557;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003104.1 Genbank gene 1 149 . - . ID=gene-C9F07_31070;Name=C9F07_31070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31070;partial=true;start_range=.,1 PYKI01003104.1 Protein Homology CDS 1 149 . - 0 ID=cds-TGD39781.1;Parent=gene-C9F07_31070;Dbxref=NCBI_GP:TGD39781.1;Name=TGD39781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455719.1;locus_tag=C9F07_31070;partial=true;product=peptidase T;protein_id=TGD39781.1;start_range=.,1;transl_table=11 PYKI01003104.1 Genbank gene 400 557 . + . ID=gene-C9F07_31075;Name=potA;end_range=557,.;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=C9F07_31075;partial=true PYKI01003104.1 Protein Homology CDS 400 557 . + 0 ID=cds-TGD39780.1;Parent=gene-C9F07_31075;Dbxref=NCBI_GP:TGD39780.1;Name=TGD39780.1;Note=functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport%3B PotA is the membrane-associated ATPase;end_range=557,.;gbkey=CDS;gene=potA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455718.1;locus_tag=C9F07_31075;partial=true;product=putrescine/spermidine ABC transporter ATP-binding protein;protein_id=TGD39780.1;transl_table=11 ##sequence-region PYKI01002436.1 1 557 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002436.1 Genbank region 1 557 . + . ID=PYKI01002436.1:1..557;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002436.1 Genbank pseudogene 1 469 . - . ID=gene-C9F07_24085;Name=C9F07_24085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24085;pseudo=true PYKI01002436.1 Protein Homology CDS 1 469 . - 0 ID=cds-C9F07_24085;Parent=gene-C9F07_24085;Note=penicillin-insensitive transglycosylase/transpeptidase%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457062.1;locus_tag=C9F07_24085;product=penicillin-binding protein 1C;pseudo=true;transl_table=11 ##sequence-region PYKI01002482.1 1 557 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002482.1 Genbank region 1 557 . + . ID=PYKI01002482.1:1..557;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002482.1 Genbank gene 1 557 . + . ID=gene-C9F07_24520;Name=metG;end_range=557,.;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=C9F07_24520;partial=true;start_range=.,1 PYKI01002482.1 Protein Homology CDS 1 557 . + 0 ID=cds-TGD50468.1;Parent=gene-C9F07_24520;Dbxref=NCBI_GP:TGD50468.1;Name=TGD50468.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;end_range=557,.;gbkey=CDS;gene=metG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456714.1;locus_tag=C9F07_24520;partial=true;product=methionine--tRNA ligase;protein_id=TGD50468.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001089.1 1 556 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001089.1 Genbank region 1 556 . + . ID=PYKI01001089.1:1..556;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001089.1 Genbank gene 1 196 . - . ID=gene-C9F07_10145;Name=C9F07_10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10145;partial=true;start_range=.,1 PYKI01001089.1 Protein Homology CDS 1 196 . - 0 ID=cds-TGD95556.1;Parent=gene-C9F07_10145;Dbxref=NCBI_GP:TGD95556.1;Name=TGD95556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=C9F07_10145;partial=true;product=MFS transporter;protein_id=TGD95556.1;start_range=.,1;transl_table=11 PYKI01001089.1 Genbank gene 312 556 . + . ID=gene-C9F07_10150;Name=C9F07_10150;end_range=556,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10150;partial=true PYKI01001089.1 Protein Homology CDS 312 556 . + 0 ID=cds-TGD95557.1;Parent=gene-C9F07_10150;Dbxref=NCBI_GP:TGD95557.1;Name=TGD95557.1;end_range=556,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457104.1;locus_tag=C9F07_10150;partial=true;product=LysR family transcriptional regulator;protein_id=TGD95557.1;transl_table=11 ##sequence-region PYKI01000953.1 1 556 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000953.1 Genbank region 1 556 . + . ID=PYKI01000953.1:1..556;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000953.1 Genbank gene 62 556 . - . ID=gene-C9F07_08705;Name=C9F07_08705;end_range=556,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08705;partial=true PYKI01000953.1 Protein Homology CDS 62 556 . - 0 ID=cds-TGE01416.1;Parent=gene-C9F07_08705;Dbxref=NCBI_GP:TGE01416.1;Name=TGE01416.1;end_range=556,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457968.1;locus_tag=C9F07_08705;partial=true;product=ferredoxin--NADP(+) reductase;protein_id=TGE01416.1;transl_table=11 ##sequence-region PYKI01002817.1 1 556 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002817.1 Genbank region 1 556 . + . ID=PYKI01002817.1:1..556;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002817.1 Genbank gene 162 556 . - . ID=gene-C9F07_28200;Name=C9F07_28200;end_range=556,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28200;partial=true PYKI01002817.1 Protein Homology CDS 162 556 . - 2 ID=cds-TGD45687.1;Parent=gene-C9F07_28200;Dbxref=NCBI_GP:TGD45687.1;Name=TGD45687.1;end_range=556,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=C9F07_28200;partial=true;product=DNA-binding transcriptional repressor DeoR;protein_id=TGD45687.1;transl_table=11 ##sequence-region PYKI01003487.1 1 556 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003487.1 Genbank region 1 556 . + . ID=PYKI01003487.1:1..556;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003487.1 Genbank gene 1 556 . + . ID=gene-C9F07_35090;Name=C9F07_35090;end_range=556,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35090;partial=true;start_range=.,1 PYKI01003487.1 Protein Homology CDS 1 556 . + 1 ID=cds-TGD32478.1;Parent=gene-C9F07_35090;Dbxref=NCBI_GP:TGD32478.1;Name=TGD32478.1;end_range=556,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=C9F07_35090;partial=true;product=hypothetical protein;protein_id=TGD32478.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003375.1 1 555 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003375.1 Genbank region 1 555 . + . ID=PYKI01003375.1:1..555;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003375.1 Genbank gene 1 300 . - . ID=gene-C9F07_33995;Name=C9F07_33995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33995;partial=true;start_range=.,1 PYKI01003375.1 Protein Homology CDS 1 300 . - 0 ID=cds-TGD34436.1;Parent=gene-C9F07_33995;Dbxref=NCBI_GP:TGD34436.1;Name=TGD34436.1;Note=catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=C9F07_33995;partial=true;product=potassium-transporting ATPase subunit KdpA;protein_id=TGD34436.1;start_range=.,1;transl_table=11 PYKI01003375.1 Genbank gene 300 389 . - . ID=gene-C9F07_34000;Name=C9F07_34000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34000 PYKI01003375.1 Protein Homology CDS 300 389 . - 0 ID=cds-TGD34437.1;Parent=gene-C9F07_34000;Dbxref=NCBI_GP:TGD34437.1;Name=TGD34437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=C9F07_34000;product=potassium-transporting ATPase subunit F;protein_id=TGD34437.1;transl_table=11 ##sequence-region PYKI01001168.1 1 555 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001168.1 Genbank region 1 555 . + . ID=PYKI01001168.1:1..555;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001168.1 Genbank gene 1 180 . - . ID=gene-C9F07_10910;Name=C9F07_10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10910;partial=true;start_range=.,1 PYKI01001168.1 Protein Homology CDS 1 180 . - 0 ID=cds-TGD93060.1;Parent=gene-C9F07_10910;Dbxref=NCBI_GP:TGD93060.1;Name=TGD93060.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=C9F07_10910;partial=true;product=lactoylglutathione lyase;protein_id=TGD93060.1;start_range=.,1;transl_table=11 PYKI01001168.1 Genbank gene 249 555 . - . ID=gene-C9F07_10915;Name=C9F07_10915;end_range=555,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10915;partial=true PYKI01001168.1 Protein Homology CDS 249 555 . - 1 ID=cds-TGD93061.1;Parent=gene-C9F07_10915;Dbxref=NCBI_GP:TGD93061.1;Name=TGD93061.1;Note=FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide;end_range=555,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456094.1;locus_tag=C9F07_10915;partial=true;product=alkene reductase;protein_id=TGD93061.1;transl_table=11 ##sequence-region PYKI01001641.1 1 555 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001641.1 Genbank region 1 555 . + . ID=PYKI01001641.1:1..555;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001641.1 Genbank gene 1 555 . + . ID=gene-C9F07_15685;Name=fliI;end_range=555,.;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=C9F07_15685;partial=true;start_range=.,1 PYKI01001641.1 Protein Homology CDS 1 555 . + 2 ID=cds-TGD70350.1;Parent=gene-C9F07_15685;Dbxref=NCBI_GP:TGD70350.1;Name=TGD70350.1;Note=involved in type III protein export during flagellum assembly;end_range=555,.;gbkey=CDS;gene=fliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=C9F07_15685;partial=true;product=flagellum-specific ATP synthase FliI;protein_id=TGD70350.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000724.1 1 555 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000724.1 Genbank region 1 555 . + . ID=PYKI01000724.1:1..555;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000724.1 Genbank pseudogene 1 474 . - . ID=gene-C9F07_06360;Name=C9F07_06360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06360;pseudo=true PYKI01000724.1 Protein Homology CDS 1 474 . - 0 ID=cds-C9F07_06360;Parent=gene-C9F07_06360;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457015.1;locus_tag=C9F07_06360;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003202.1 1 3148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003202.1 Genbank region 1 3148 . + . ID=PYKI01003202.1:1..3148;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003202.1 Genbank gene 1 910 . - . ID=gene-C9F07_32190;Name=C9F07_32190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32190;partial=true;start_range=.,1 PYKI01003202.1 Protein Homology CDS 1 910 . - 0 ID=cds-TGD37286.1;Parent=gene-C9F07_32190;Dbxref=NCBI_GP:TGD37286.1;Name=TGD37286.1;Note=catalyzes the formation of pyruvate from oxaloacetate%3B sodium translocating;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454665.1;locus_tag=C9F07_32190;partial=true;product=oxaloacetate decarboxylase subunit beta;protein_id=TGD37286.1;start_range=.,1;transl_table=11 PYKI01003202.1 Genbank gene 923 2698 . - . ID=gene-C9F07_32195;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=C9F07_32195 PYKI01003202.1 Protein Homology CDS 923 2698 . - 0 ID=cds-TGD37287.1;Parent=gene-C9F07_32195;Dbxref=NCBI_GP:TGD37287.1;Name=TGD37287.1;gbkey=CDS;gene=oadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=C9F07_32195;product=oxaloacetate decarboxylase subunit alpha;protein_id=TGD37287.1;transl_table=11 PYKI01003202.1 Genbank gene 2714 2953 . - . ID=gene-C9F07_32200;Name=C9F07_32200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32200 PYKI01003202.1 Protein Homology CDS 2714 2953 . - 0 ID=cds-TGD37288.1;Parent=gene-C9F07_32200;Dbxref=NCBI_GP:TGD37288.1;Name=TGD37288.1;Note=catalyzes the decarboxylation of oxaloacetate to form pyruvate and carbon dioxide;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454667.1;locus_tag=C9F07_32200;product=oxaloacetate decarboxylase subunit gamma;protein_id=TGD37288.1;transl_table=11 ##sequence-region PYKI01001266.1 1 555 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001266.1 Genbank region 1 555 . + . ID=PYKI01001266.1:1..555;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001266.1 Genbank gene 1 330 . - . ID=gene-C9F07_11845;Name=C9F07_11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11845;partial=true;start_range=.,1 PYKI01001266.1 Protein Homology CDS 1 330 . - 0 ID=cds-TGD88808.1;Parent=gene-C9F07_11845;Dbxref=NCBI_GP:TGD88808.1;Name=TGD88808.1;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=C9F07_11845;partial=true;product=coproporphyrinogen III oxidase;protein_id=TGD88808.1;start_range=.,1;transl_table=11 PYKI01001266.1 Genbank pseudogene 333 512 . - . ID=gene-C9F07_11850;Name=C9F07_11850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11850;pseudo=true PYKI01001266.1 Protein Homology CDS 333 512 . - 0 ID=cds-C9F07_11850;Parent=gene-C9F07_11850;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456985.1;locus_tag=C9F07_11850;product=N-acetylmuramoyl-L-alanine amidase;pseudo=true;transl_table=11 ##sequence-region PYKI01003316.1 1 554 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003316.1 Genbank region 1 554 . + . ID=PYKI01003316.1:1..554;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003316.1 Genbank pseudogene 62 554 . - . ID=gene-C9F07_33355;Name=C9F07_33355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33355;pseudo=true PYKI01003316.1 Protein Homology CDS 62 554 . - 1 ID=cds-C9F07_33355;Parent=gene-C9F07_33355;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459665.1;locus_tag=C9F07_33355;product=asparagine synthetase B;pseudo=true;transl_table=11 ##sequence-region PYKI01003439.1 1 554 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003439.1 Genbank region 1 554 . + . ID=PYKI01003439.1:1..554;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003439.1 Genbank gene 53 554 . - . ID=gene-C9F07_34585;Name=C9F07_34585;end_range=554,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34585;partial=true PYKI01003439.1 Protein Homology CDS 53 554 . - 1 ID=cds-TGD33446.1;Parent=gene-C9F07_34585;Dbxref=NCBI_GP:TGD33446.1;Name=TGD33446.1;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system;end_range=554,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=C9F07_34585;partial=true;product=DNA-binding response regulator;protein_id=TGD33446.1;transl_table=11 ##sequence-region PYKI01000463.1 1 553 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000463.1 Genbank region 1 553 . + . ID=PYKI01000463.1:1..553;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000463.1 Genbank gene 1 331 . + . ID=gene-C9F07_03640;Name=C9F07_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03640;partial=true;start_range=.,1 PYKI01000463.1 Protein Homology CDS 1 331 . + 1 ID=cds-TGE19767.1;Parent=gene-C9F07_03640;Dbxref=NCBI_GP:TGE19767.1;Name=TGE19767.1;Note=with HisPMQ is involved in the transport of histidine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=C9F07_03640;partial=true;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=TGE19767.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002292.1 1 553 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002292.1 Genbank region 1 553 . + . ID=PYKI01002292.1:1..553;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002292.1 Genbank gene 1 393 . - . ID=gene-C9F07_22495;Name=C9F07_22495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22495;partial=true;start_range=.,1 PYKI01002292.1 Protein Homology CDS 1 393 . - 0 ID=cds-TGD54670.1;Parent=gene-C9F07_22495;Dbxref=NCBI_GP:TGD54670.1;Name=TGD54670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455746.1;locus_tag=C9F07_22495;partial=true;product=patatin family protein;protein_id=TGD54670.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001697.1 1 552 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001697.1 Genbank region 1 552 . + . ID=PYKI01001697.1:1..552;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001697.1 Genbank pseudogene 35 361 . + . ID=gene-C9F07_16185;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=pseudogene;locus_tag=C9F07_16185;pseudo=true PYKI01001697.1 Protein Homology CDS 35 361 . + 0 ID=cds-C9F07_16185;Parent=gene-C9F07_16185;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=lipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459627.3;locus_tag=C9F07_16185;product=lipoyl(octanoyl) transferase;pseudo=true;transl_table=11 ##sequence-region PYKI01000697.1 1 552 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000697.1 Genbank region 1 552 . + . ID=PYKI01000697.1:1..552;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000697.1 Genbank gene 1 121 . + . ID=gene-C9F07_06105;Name=C9F07_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06105;partial=true;start_range=.,1 PYKI01000697.1 Protein Homology CDS 1 121 . + 1 ID=cds-TGE11322.1;Parent=gene-C9F07_06105;Dbxref=NCBI_GP:TGE11322.1;Name=TGE11322.1;Note=methylates the MCP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456484.1;locus_tag=C9F07_06105;partial=true;product=chemotaxis protein-glutamate O-methyltransferase;protein_id=TGE11322.1;start_range=.,1;transl_table=11 PYKI01000697.1 Genbank gene 118 552 . + . ID=gene-C9F07_06110;Name=C9F07_06110;end_range=552,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06110;partial=true PYKI01000697.1 Protein Homology CDS 118 552 . + 0 ID=cds-TGE11323.1;Parent=gene-C9F07_06110;Dbxref=NCBI_GP:TGE11323.1;Name=TGE11323.1;Note=regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins;end_range=552,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=C9F07_06110;partial=true;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=TGE11323.1;transl_table=11 ##sequence-region PYKI01001383.1 1 3148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001383.1 Genbank region 1 3148 . + . ID=PYKI01001383.1:1..3148;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001383.1 Genbank gene 1 86 . - . ID=gene-C9F07_12995;Name=C9F07_12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12995;partial=true;start_range=.,1 PYKI01001383.1 Protein Homology CDS 1 86 . - 0 ID=cds-TGD84371.1;Parent=gene-C9F07_12995;Dbxref=NCBI_GP:TGD84371.1;Name=TGD84371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457903.1;locus_tag=C9F07_12995;partial=true;product=DUF1481 domain-containing protein;protein_id=TGD84371.1;start_range=.,1;transl_table=11 PYKI01001383.1 Genbank gene 98 370 . - . ID=gene-C9F07_13000;Name=C9F07_13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13000 PYKI01001383.1 Protein Homology CDS 98 370 . - 0 ID=cds-TGD84372.1;Parent=gene-C9F07_13000;Dbxref=NCBI_GP:TGD84372.1;Name=TGD84372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=C9F07_13000;product=DNA-binding protein HU-alpha;protein_id=TGD84372.1;transl_table=11 PYKI01001383.1 Genbank gene 557 1147 . - . ID=gene-C9F07_13005;Name=C9F07_13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13005 PYKI01001383.1 Protein Homology CDS 557 1147 . - 0 ID=cds-TGD84373.1;Parent=gene-C9F07_13005;Dbxref=NCBI_GP:TGD84373.1;Name=TGD84373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457905.1;locus_tag=C9F07_13005;product=DUF416 domain-containing protein;protein_id=TGD84373.1;transl_table=11 PYKI01001383.1 Genbank gene 1189 1860 . - . ID=gene-C9F07_13010;Name=C9F07_13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13010 PYKI01001383.1 Protein Homology CDS 1189 1860 . - 0 ID=cds-TGD84374.1;Parent=gene-C9F07_13010;Dbxref=NCBI_GP:TGD84374.1;Name=TGD84374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457906.1;locus_tag=C9F07_13010;product=endonuclease V;protein_id=TGD84374.1;transl_table=11 PYKI01001383.1 Genbank gene 1870 2934 . - . ID=gene-C9F07_13015;Name=C9F07_13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13015 PYKI01001383.1 Protein Homology CDS 1870 2934 . - 0 ID=cds-TGD84375.1;Parent=gene-C9F07_13015;Dbxref=NCBI_GP:TGD84375.1;Name=TGD84375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137620.1;locus_tag=C9F07_13015;product=uroporphyrinogen decarboxylase;protein_id=TGD84375.1;transl_table=11 PYKI01001383.1 Genbank gene 2975 3148 . - . ID=gene-C9F07_13020;Name=nudC;end_range=3148,.;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=C9F07_13020;partial=true PYKI01001383.1 Protein Homology CDS 2975 3148 . - 0 ID=cds-TGD84376.1;Parent=gene-C9F07_13020;Dbxref=NCBI_GP:TGD84376.1;Name=TGD84376.1;Note=can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates;end_range=3148,.;gbkey=CDS;gene=nudC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457908.1;locus_tag=C9F07_13020;partial=true;product=NAD(+) diphosphatase;protein_id=TGD84376.1;transl_table=11 ##sequence-region PYKI01002376.1 1 6329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002376.1 Genbank region 1 6329 . + . ID=PYKI01002376.1:1..6329;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002376.1 Genbank pseudogene 1 341 . - . ID=gene-C9F07_23335;Name=infC;gbkey=Gene;gene=infC;gene_biotype=pseudogene;locus_tag=C9F07_23335;pseudo=true PYKI01002376.1 Protein Homology CDS 1 341 . - 0 ID=cds-C9F07_23335;Parent=gene-C9F07_23335;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;gene=infC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456178.3;locus_tag=C9F07_23335;product=translation initiation factor IF-3;pseudo=true;transl_table=11 PYKI01002376.1 Genbank gene 345 2273 . - . ID=gene-C9F07_23340;Name=C9F07_23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23340 PYKI01002376.1 Protein Homology CDS 345 2273 . - 0 ID=cds-TGD52572.1;Parent=gene-C9F07_23340;Dbxref=NCBI_GP:TGD52572.1;Name=TGD52572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=C9F07_23340;product=threonine--tRNA ligase;protein_id=TGD52572.1;transl_table=11 PYKI01002376.1 Genbank gene 2533 3387 . - . ID=gene-C9F07_23345;Name=C9F07_23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23345 PYKI01002376.1 Protein Homology CDS 2533 3387 . - 0 ID=cds-TGD52573.1;Parent=gene-C9F07_23345;Dbxref=NCBI_GP:TGD52573.1;Name=TGD52573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=C9F07_23345;product=DNA/RNA non-specific endonuclease;protein_id=TGD52573.1;transl_table=11 PYKI01002376.1 Genbank gene 3450 3698 . - . ID=gene-C9F07_23350;Name=C9F07_23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23350 PYKI01002376.1 Protein Homology CDS 3450 3698 . - 0 ID=cds-TGD52574.1;Parent=gene-C9F07_23350;Dbxref=NCBI_GP:TGD52574.1;Name=TGD52574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916597.1;locus_tag=C9F07_23350;product=hypothetical protein;protein_id=TGD52574.1;transl_table=11 PYKI01002376.1 Genbank gene 3841 4800 . + . ID=gene-C9F07_23355;Name=C9F07_23355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23355 PYKI01002376.1 Protein Homology CDS 3841 4800 . + 0 ID=cds-TGD52575.1;Parent=gene-C9F07_23355;Dbxref=NCBI_GP:TGD52575.1;Name=TGD52575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456183.1;locus_tag=C9F07_23355;product=DUF2219 domain-containing protein;protein_id=TGD52575.1;transl_table=11 PYKI01002376.1 Genbank gene 4849 5607 . - . ID=gene-C9F07_23360;Name=C9F07_23360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23360 PYKI01002376.1 Protein Homology CDS 4849 5607 . - 0 ID=cds-TGD52576.1;Parent=gene-C9F07_23360;Dbxref=NCBI_GP:TGD52576.1;Name=TGD52576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=C9F07_23360;product=DUF481 domain-containing protein;protein_id=TGD52576.1;transl_table=11 PYKI01002376.1 Genbank gene 5896 6329 . + . ID=gene-C9F07_23365;Name=C9F07_23365;end_range=6329,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23365;partial=true PYKI01002376.1 Protein Homology CDS 5896 6329 . + 0 ID=cds-TGD52577.1;Parent=gene-C9F07_23365;Dbxref=NCBI_GP:TGD52577.1;Name=TGD52577.1;end_range=6329,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456185.1;locus_tag=C9F07_23365;partial=true;product=6-phosphofructokinase II;protein_id=TGD52577.1;transl_table=11 ##sequence-region PYKI01000569.1 1 552 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000569.1 Genbank region 1 552 . + . ID=PYKI01000569.1:1..552;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000569.1 Genbank gene 1 552 . + . ID=gene-C9F07_04810;Name=sipB;end_range=552,.;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=C9F07_04810;partial=true;start_range=.,1 PYKI01000569.1 Protein Homology CDS 1 552 . + 0 ID=cds-TGE14661.1;Parent=gene-C9F07_04810;Dbxref=NCBI_GP:TGE14661.1;Name=TGE14661.1;end_range=552,.;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457279.1;locus_tag=C9F07_04810;partial=true;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=TGE14661.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000516.1 1 550 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000516.1 Genbank region 1 550 . + . ID=PYKI01000516.1:1..550;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000516.1 Genbank gene 1 435 . + . ID=gene-C9F07_04285;Name=C9F07_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04285;partial=true;start_range=.,1 PYKI01000516.1 Protein Homology CDS 1 435 . + 0 ID=cds-TGE16528.1;Parent=gene-C9F07_04285;Dbxref=NCBI_GP:TGE16528.1;Name=TGE16528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455933.1;locus_tag=C9F07_04285;partial=true;product=malto-oligosyltrehalose synthase;protein_id=TGE16528.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002169.1 1 550 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002169.1 Genbank region 1 550 . + . ID=PYKI01002169.1:1..550;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002169.1 Genbank pseudogene 1 441 . + . ID=gene-C9F07_21085;Name=C9F07_21085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21085;pseudo=true PYKI01002169.1 Protein Homology CDS 1 441 . + 0 ID=cds-C9F07_21085;Parent=gene-C9F07_21085;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=C9F07_21085;product=enterochelin esterase;pseudo=true;transl_table=11 ##sequence-region PYKI01002424.1 1 550 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002424.1 Genbank region 1 550 . + . ID=PYKI01002424.1:1..550;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002424.1 Genbank gene 1 342 . + . ID=gene-C9F07_23960;Name=C9F07_23960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23960;partial=true;start_range=.,1 PYKI01002424.1 Protein Homology CDS 1 342 . + 0 ID=cds-TGD51385.1;Parent=gene-C9F07_23960;Dbxref=NCBI_GP:TGD51385.1;Name=TGD51385.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=C9F07_23960;partial=true;product=riboflavin synthase;protein_id=TGD51385.1;start_range=.,1;transl_table=11 PYKI01002424.1 Genbank gene 384 550 . - . ID=gene-C9F07_23965;Name=C9F07_23965;end_range=550,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23965;partial=true PYKI01002424.1 Protein Homology CDS 384 550 . - 2 ID=cds-TGD51386.1;Parent=gene-C9F07_23965;Dbxref=NCBI_GP:TGD51386.1;Name=TGD51386.1;end_range=550,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456103.1;locus_tag=C9F07_23965;partial=true;product=cyclopropane-fatty-acyl-phospholipid synthase;protein_id=TGD51386.1;transl_table=11 ##sequence-region PYKI01000750.1 1 549 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000750.1 Genbank region 1 549 . + . ID=PYKI01000750.1:1..549;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000750.1 Genbank pseudogene 19 477 . + . ID=gene-C9F07_06620;Name=C9F07_06620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06620;pseudo=true PYKI01000750.1 Protein Homology CDS 19 477 . + 0 ID=cds-C9F07_06620;Parent=gene-C9F07_06620;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=C9F07_06620;product=nucleobase:cation symporter;pseudo=true;transl_table=11 ##sequence-region PYKI01002707.1 1 549 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002707.1 Genbank region 1 549 . + . ID=PYKI01002707.1:1..549;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002707.1 Genbank gene 81 549 . + . ID=gene-C9F07_27005;Name=C9F07_27005;end_range=549,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27005;partial=true PYKI01002707.1 Protein Homology CDS 81 549 . + 0 ID=cds-TGD48034.1;Parent=gene-C9F07_27005;Dbxref=NCBI_GP:TGD48034.1;Name=TGD48034.1;end_range=549,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458527.1;locus_tag=C9F07_27005;partial=true;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=TGD48034.1;transl_table=11 ##sequence-region PYKI01000543.1 1 548 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000543.1 Genbank region 1 548 . + . ID=PYKI01000543.1:1..548;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000543.1 Genbank gene 1 529 . - . ID=gene-C9F07_04505;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=C9F07_04505;partial=true;start_range=.,1 PYKI01000543.1 Protein Homology CDS 1 529 . - 0 ID=cds-TGE15523.1;Parent=gene-C9F07_04505;Dbxref=NCBI_GP:TGE15523.1;Name=TGE15523.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001556044.1;locus_tag=C9F07_04505;partial=true;product=class II fumarate hydratase;protein_id=TGE15523.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001186.1 1 546 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001186.1 Genbank region 1 546 . + . ID=PYKI01001186.1:1..546;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001186.1 Genbank gene 1 93 . - . ID=gene-C9F07_11100;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=C9F07_11100;partial=true;start_range=.,1 PYKI01001186.1 Protein Homology CDS 1 93 . - 0 ID=cds-TGD92127.1;Parent=gene-C9F07_11100;Dbxref=NCBI_GP:TGD92127.1;Name=TGD92127.1;Note=Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids;gbkey=CDS;gene=acpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457106.1;locus_tag=C9F07_11100;partial=true;product=holo-ACP synthase;protein_id=TGD92127.1;start_range=.,1;transl_table=11 PYKI01001186.1 Genbank gene 93 458 . - . ID=gene-C9F07_11105;Name=C9F07_11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11105 PYKI01001186.1 Protein Homology CDS 93 458 . - 0 ID=cds-TGD92128.1;Parent=gene-C9F07_11105;Dbxref=NCBI_GP:TGD92128.1;Name=TGD92128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001711127.1;locus_tag=C9F07_11105;product=pyridoxine 5'-phosphate synthase;protein_id=TGD92128.1;transl_table=11 ##sequence-region PYKI01001487.1 1 3146 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001487.1 Genbank region 1 3146 . + . ID=PYKI01001487.1:1..3146;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001487.1 Genbank pseudogene 6 185 . - . ID=gene-C9F07_14150;Name=C9F07_14150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14150;pseudo=true PYKI01001487.1 Protein Homology CDS 6 185 . - 0 ID=cds-C9F07_14150;Parent=gene-C9F07_14150;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458061.1;locus_tag=C9F07_14150;product=sugar ABC transporter ATP-binding protein;pseudo=true;transl_table=11 PYKI01001487.1 Genbank gene 193 612 . - . ID=gene-C9F07_14155;Name=C9F07_14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14155 PYKI01001487.1 Protein Homology CDS 193 612 . - 0 ID=cds-TGD79210.1;Parent=gene-C9F07_14155;Dbxref=NCBI_GP:TGD79210.1;Name=TGD79210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=C9F07_14155;product=D-ribose pyranase;protein_id=TGD79210.1;transl_table=11 PYKI01001487.1 Genbank gene 829 2697 . - . ID=gene-C9F07_14160;Name=trkD;gbkey=Gene;gene=trkD;gene_biotype=protein_coding;locus_tag=C9F07_14160 PYKI01001487.1 Protein Homology CDS 829 2697 . - 0 ID=cds-TGD79211.1;Parent=gene-C9F07_14160;Dbxref=NCBI_GP:TGD79211.1;Name=TGD79211.1;Note=Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH;gbkey=CDS;gene=trkD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=C9F07_14160;product=potassium transporter Kup;protein_id=TGD79211.1;transl_table=11 ##sequence-region PYKI01002951.1 1 546 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002951.1 Genbank region 1 546 . + . ID=PYKI01002951.1:1..546;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002951.1 Genbank pseudogene 1 501 . + . ID=gene-C9F07_29570;Name=C9F07_29570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29570;pseudo=true PYKI01002951.1 Protein Homology CDS 1 501 . + 0 ID=cds-C9F07_29570;Parent=gene-C9F07_29570;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=C9F07_29570;product=catalase;pseudo=true;transl_table=11 ##sequence-region PYKI01003423.1 1 545 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003423.1 Genbank region 1 545 . + . ID=PYKI01003423.1:1..545;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003423.1 Genbank gene 1 545 . + . ID=gene-C9F07_34415;Name=C9F07_34415;end_range=545,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34415;partial=true;start_range=.,1 PYKI01003423.1 Protein Homology CDS 1 545 . + 1 ID=cds-TGD33611.1;Parent=gene-C9F07_34415;Dbxref=NCBI_GP:TGD33611.1;Name=TGD33611.1;end_range=545,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458584.1;locus_tag=C9F07_34415;partial=true;product=formate dehydrogenase subunit alpha;protein_id=TGD33611.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003488.1 1 545 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003488.1 Genbank region 1 545 . + . ID=PYKI01003488.1:1..545;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003488.1 Genbank gene 1 118 . + . ID=gene-C9F07_35095;Name=C9F07_35095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35095;partial=true;start_range=.,1 PYKI01003488.1 Protein Homology CDS 1 118 . + 1 ID=cds-TGD32476.1;Parent=gene-C9F07_35095;Dbxref=NCBI_GP:TGD32476.1;Name=TGD32476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000370994.1;locus_tag=C9F07_35095;partial=true;product=phosphoenolpyruvate synthase regulatory protein;protein_id=TGD32476.1;start_range=.,1;transl_table=11 PYKI01003488.1 Genbank gene 274 545 . + . ID=gene-C9F07_35100;Name=C9F07_35100;end_range=545,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35100;partial=true PYKI01003488.1 Protein Homology CDS 274 545 . + 0 ID=cds-TGD32477.1;Parent=gene-C9F07_35100;Dbxref=NCBI_GP:TGD32477.1;Name=TGD32477.1;end_range=545,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456164.1;locus_tag=C9F07_35100;partial=true;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=TGD32477.1;transl_table=11 ##sequence-region PYKI01002507.1 1 545 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002507.1 Genbank region 1 545 . + . ID=PYKI01002507.1:1..545;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002507.1 Genbank gene 31 545 . + . ID=gene-C9F07_24850;Name=C9F07_24850;end_range=545,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24850;partial=true PYKI01002507.1 Protein Homology CDS 31 545 . + 0 ID=cds-TGD50214.1;Parent=gene-C9F07_24850;Dbxref=NCBI_GP:TGD50214.1;Name=TGD50214.1;end_range=545,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=C9F07_24850;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGD50214.1;transl_table=11 ##sequence-region PYKI01000680.1 1 544 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000680.1 Genbank region 1 544 . + . ID=PYKI01000680.1:1..544;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000680.1 Genbank gene 1 136 . + . ID=gene-C9F07_05915;Name=C9F07_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05915;partial=true;start_range=.,1 PYKI01000680.1 Protein Homology CDS 1 136 . + 1 ID=cds-TGE11587.1;Parent=gene-C9F07_05915;Dbxref=NCBI_GP:TGE11587.1;Name=TGE11587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454675.1;locus_tag=C9F07_05915;partial=true;product=dihydrodipicolinate reductase;protein_id=TGE11587.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002627.1 1 544 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002627.1 Genbank region 1 544 . + . ID=PYKI01002627.1:1..544;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002627.1 Genbank gene 1 158 . + . ID=gene-C9F07_26145;Name=C9F07_26145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26145;partial=true;start_range=.,1 PYKI01002627.1 Protein Homology CDS 1 158 . + 2 ID=cds-TGD49472.1;Parent=gene-C9F07_26145;Dbxref=NCBI_GP:TGD49472.1;Name=TGD49472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=C9F07_26145;partial=true;product=5'-deoxynucleotidase;protein_id=TGD49472.1;start_range=.,1;transl_table=11 PYKI01002627.1 Genbank pseudogene 264 544 . - . ID=gene-C9F07_26150;Name=C9F07_26150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26150;pseudo=true PYKI01002627.1 Protein Homology CDS 264 544 . - 2 ID=cds-C9F07_26150;Parent=gene-C9F07_26150;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129486.1;locus_tag=C9F07_26150;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000113.1 1 543 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000113.1 Genbank region 1 543 . + . ID=PYKI01000113.1:1..543;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000113.1 Genbank gene 1 75 . - . ID=gene-C9F07_00775;Name=C9F07_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00775;partial=true;start_range=.,1 PYKI01000113.1 Protein Homology CDS 1 75 . - 0 ID=cds-TGE30112.1;Parent=gene-C9F07_00775;Dbxref=NCBI_GP:TGE30112.1;Name=TGE30112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001638287.1;locus_tag=C9F07_00775;partial=true;product=ribonuclease E;protein_id=TGE30112.1;start_range=.,1;transl_table=11 PYKI01000113.1 Genbank gene 211 459 . + . ID=gene-C9F07_00780;Name=C9F07_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00780 PYKI01000113.1 Protein Homology CDS 211 459 . + 0 ID=cds-TGE30111.1;Parent=gene-C9F07_00780;Dbxref=NCBI_GP:TGE30111.1;Name=TGE30111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539709.1;locus_tag=C9F07_00780;product=DUF2655 domain-containing protein;protein_id=TGE30111.1;transl_table=11 ##sequence-region PYKI01001808.1 1 543 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001808.1 Genbank region 1 543 . + . ID=PYKI01001808.1:1..543;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001808.1 Genbank pseudogene 1 483 . - . ID=gene-C9F07_17415;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=pseudogene;locus_tag=C9F07_17415;pseudo=true PYKI01001808.1 Protein Homology CDS 1 483 . - 0 ID=cds-C9F07_17415;Parent=gene-C9F07_17415;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=pheA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=C9F07_17415;product=bifunctional chorismate mutase/prephenate dehydratase;pseudo=true;transl_table=11 ##sequence-region PYKI01000410.1 1 543 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000410.1 Genbank region 1 543 . + . ID=PYKI01000410.1:1..543;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000410.1 Genbank pseudogene 69 326 . - . ID=gene-C9F07_03150;Name=C9F07_03150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03150;pseudo=true PYKI01000410.1 Protein Homology CDS 69 326 . - 0 ID=cds-C9F07_03150;Parent=gene-C9F07_03150;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003831072.1;locus_tag=C9F07_03150;product=NfeD family protein;pseudo=true;transl_table=11 PYKI01000410.1 Genbank gene 323 543 . - . ID=gene-C9F07_03155;Name=C9F07_03155;end_range=543,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03155;partial=true PYKI01000410.1 Protein Homology CDS 323 543 . - 2 ID=cds-TGE21028.1;Parent=gene-C9F07_03155;Dbxref=NCBI_GP:TGE21028.1;Name=TGE21028.1;end_range=543,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=C9F07_03155;partial=true;product=paraslipin;protein_id=TGE21028.1;transl_table=11 ##sequence-region PYKI01001000.1 1 3145 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001000.1 Genbank region 1 3145 . + . ID=PYKI01001000.1:1..3145;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001000.1 Genbank gene 1 318 . - . ID=gene-C9F07_09135;Name=C9F07_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09135;partial=true;start_range=.,1 PYKI01001000.1 Protein Homology CDS 1 318 . - 0 ID=cds-TGD98521.1;Parent=gene-C9F07_09135;Dbxref=NCBI_GP:TGD98521.1;Name=TGD98521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458876.1;locus_tag=C9F07_09135;partial=true;product=hypothetical protein;protein_id=TGD98521.1;start_range=.,1;transl_table=11 PYKI01001000.1 Genbank gene 395 856 . - . ID=gene-C9F07_09140;Name=C9F07_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09140 PYKI01001000.1 Protein Homology CDS 395 856 . - 0 ID=cds-TGD98522.1;Parent=gene-C9F07_09140;Dbxref=NCBI_GP:TGD98522.1;Name=TGD98522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=C9F07_09140;product=aspartate carbamoyltransferase regulatory subunit;protein_id=TGD98522.1;transl_table=11 PYKI01001000.1 Genbank gene 869 1804 . - . ID=gene-C9F07_09145;Name=C9F07_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09145 PYKI01001000.1 Protein Homology CDS 869 1804 . - 0 ID=cds-TGD98523.1;Parent=gene-C9F07_09145;Dbxref=NCBI_GP:TGD98523.1;Name=TGD98523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458878.1;locus_tag=C9F07_09145;product=aspartate carbamoyltransferase;protein_id=TGD98523.1;transl_table=11 PYKI01001000.1 Genbank gene 1840 1941 . - . ID=gene-C9F07_09150;Name=C9F07_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09150 PYKI01001000.1 Protein Homology CDS 1840 1941 . - 0 ID=cds-TGD98524.1;Parent=gene-C9F07_09150;Dbxref=NCBI_GP:TGD98524.1;Name=TGD98524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458879.1;locus_tag=C9F07_09150;product=pyrBI operon leader peptide;protein_id=TGD98524.1;transl_table=11 PYKI01001000.1 Genbank gene 1921 2061 . + . ID=gene-C9F07_09155;Name=C9F07_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09155 PYKI01001000.1 Protein Homology CDS 1921 2061 . + 0 ID=cds-TGD98526.1;Parent=gene-C9F07_09155;Dbxref=NCBI_GP:TGD98526.1;Name=TGD98526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=C9F07_09155;product=hypothetical protein;protein_id=TGD98526.1;transl_table=11 PYKI01001000.1 Genbank gene 2031 2519 . - . ID=gene-C9F07_09160;Name=C9F07_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09160 PYKI01001000.1 Protein Homology CDS 2031 2519 . - 0 ID=cds-TGD98525.1;Parent=gene-C9F07_09160;Dbxref=NCBI_GP:TGD98525.1;Name=TGD98525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=C9F07_09160;product=ArgR family transcriptional regulator;protein_id=TGD98525.1;transl_table=11 PYKI01001000.1 Genbank pseudogene 2706 3059 . - . ID=gene-C9F07_09165;Name=C9F07_09165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09165;pseudo=true PYKI01001000.1 Protein Homology CDS 2706 3059 . - 0 ID=cds-C9F07_09165;Parent=gene-C9F07_09165;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458881.1;locus_tag=C9F07_09165;product=C4-dicarboxylate ABC transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01000011.1 1 543 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000011.1 Genbank region 1 543 . + . ID=PYKI01000011.1:1..543;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000011.1 Genbank pseudogene 309 467 . + . ID=gene-C9F07_00060;Name=C9F07_00060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00060;pseudo=true PYKI01000011.1 Protein Homology CDS 309 467 . + 0 ID=cds-C9F07_00060;Parent=gene-C9F07_00060;Note=membrane protein required for colicin V production%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456905.1;locus_tag=C9F07_00060;product=colicin V production protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001287.1 1 543 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001287.1 Genbank region 1 543 . + . ID=PYKI01001287.1:1..543;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001287.1 Genbank pseudogene 1 527 . + . ID=gene-C9F07_12050;Name=C9F07_12050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12050;pseudo=true PYKI01001287.1 Protein Homology CDS 1 527 . + 2 ID=cds-C9F07_12050;Parent=gene-C9F07_12050;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=C9F07_12050;product=fimbrial protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001631.1 1 543 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001631.1 Genbank region 1 543 . + . ID=PYKI01001631.1:1..543;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001631.1 Genbank gene 1 543 . - . ID=gene-C9F07_15585;Name=relA;end_range=543,.;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=C9F07_15585;partial=true;start_range=.,1 PYKI01001631.1 Protein Homology CDS 1 543 . - 2 ID=cds-TGD70478.1;Parent=gene-C9F07_15585;Dbxref=NCBI_GP:TGD70478.1;Name=TGD70478.1;Note=(p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;end_range=543,.;gbkey=CDS;gene=relA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311671.1;locus_tag=C9F07_15585;partial=true;product=GTP diphosphokinase;protein_id=TGD70478.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002096.1 1 542 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002096.1 Genbank region 1 542 . + . ID=PYKI01002096.1:1..542;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002096.1 Genbank gene 80 542 . + . ID=gene-C9F07_20330;Name=C9F07_20330;end_range=542,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20330;partial=true PYKI01002096.1 Protein Homology CDS 80 542 . + 0 ID=cds-TGD58800.1;Parent=gene-C9F07_20330;Dbxref=NCBI_GP:TGD58800.1;Name=TGD58800.1;end_range=542,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653084.1;locus_tag=C9F07_20330;partial=true;product=LysR family transcriptional regulator;protein_id=TGD58800.1;transl_table=11 ##sequence-region PYKI01000126.1 1 541 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000126.1 Genbank region 1 541 . + . ID=PYKI01000126.1:1..541;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000126.1 Genbank pseudogene 70 333 . + . ID=gene-C9F07_00845;Name=C9F07_00845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00845;pseudo=true PYKI01000126.1 Protein Homology CDS 70 333 . + 0 ID=cds-C9F07_00845;Parent=gene-C9F07_00845;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456284.1;locus_tag=C9F07_00845;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000126.1 Genbank gene 337 541 . + . ID=gene-C9F07_00850;Name=C9F07_00850;end_range=541,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00850;partial=true PYKI01000126.1 Protein Homology CDS 337 541 . + 0 ID=cds-TGE30101.1;Parent=gene-C9F07_00850;Dbxref=NCBI_GP:TGE30101.1;Name=TGE30101.1;end_range=541,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456283.1;locus_tag=C9F07_00850;partial=true;product=hypothetical protein;protein_id=TGE30101.1;transl_table=11 ##sequence-region PYKI01003241.1 1 541 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003241.1 Genbank region 1 541 . + . ID=PYKI01003241.1:1..541;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003241.1 Genbank pseudogene 1 541 . - . ID=gene-C9F07_32650;Name=C9F07_32650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32650;pseudo=true PYKI01003241.1 Protein Homology CDS 1 541 . - 1 ID=cds-C9F07_32650;Parent=gene-C9F07_32650;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455942.1;locus_tag=C9F07_32650;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01003025.1 1 541 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003025.1 Genbank region 1 541 . + . ID=PYKI01003025.1:1..541;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003025.1 Genbank gene 1 462 . + . ID=gene-C9F07_30375;Name=C9F07_30375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30375;partial=true;start_range=.,1 PYKI01003025.1 Protein Homology CDS 1 462 . + 0 ID=cds-TGD41108.1;Parent=gene-C9F07_30375;Dbxref=NCBI_GP:TGD41108.1;Name=TGD41108.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03446.13;locus_tag=C9F07_30375;partial=true;product=3-hydroxyisobutyrate dehydrogenase;protein_id=TGD41108.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001008.1 1 540 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001008.1 Genbank region 1 540 . + . ID=PYKI01001008.1:1..540;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001008.1 Genbank gene 53 540 . - . ID=gene-C9F07_09255;Name=flgD;end_range=540,.;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=C9F07_09255;partial=true PYKI01001008.1 Protein Homology CDS 53 540 . - 2 ID=cds-TGD98153.1;Parent=gene-C9F07_09255;Dbxref=NCBI_GP:TGD98153.1;Name=TGD98153.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production;end_range=540,.;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455669.1;locus_tag=C9F07_09255;partial=true;product=flagellar basal body rod modification protein;protein_id=TGD98153.1;transl_table=11 ##sequence-region PYKI01000168.1 1 540 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000168.1 Genbank region 1 540 . + . ID=PYKI01000168.1:1..540;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000168.1 Genbank gene 1 267 . - . ID=gene-C9F07_01150;Name=C9F07_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01150;partial=true;start_range=.,1 PYKI01000168.1 Protein Homology CDS 1 267 . - 0 ID=cds-TGE30059.1;Parent=gene-C9F07_01150;Dbxref=NCBI_GP:TGE30059.1;Name=TGE30059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455218.1;locus_tag=C9F07_01150;partial=true;product=ribosome silencing factor;protein_id=TGE30059.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003193.1 1 540 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003193.1 Genbank region 1 540 . + . ID=PYKI01003193.1:1..540;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003193.1 Genbank pseudogene 1 513 . + . ID=gene-C9F07_32050;Name=C9F07_32050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32050;pseudo=true PYKI01003193.1 Protein Homology CDS 1 513 . + 0 ID=cds-C9F07_32050;Parent=gene-C9F07_32050;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457629.1;locus_tag=C9F07_32050;product=formate acetyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01001079.1 1 3139 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001079.1 Genbank region 1 3139 . + . ID=PYKI01001079.1:1..3139;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001079.1 Genbank gene 1 592 . - . ID=gene-C9F07_10005;Name=C9F07_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10005;partial=true;start_range=.,1 PYKI01001079.1 Protein Homology CDS 1 592 . - 0 ID=cds-TGD95737.1;Parent=gene-C9F07_10005;Dbxref=NCBI_GP:TGD95737.1;Name=TGD95737.1;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=C9F07_10005;partial=true;product=membrane protein insertase YidC;protein_id=TGD95737.1;start_range=.,1;transl_table=11 PYKI01001079.1 Genbank gene 595 852 . - . ID=gene-C9F07_10010;Name=C9F07_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10010 PYKI01001079.1 Protein Homology CDS 595 852 . - 0 ID=cds-TGD95738.1;Parent=gene-C9F07_10010;Dbxref=NCBI_GP:TGD95738.1;Name=TGD95738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=C9F07_10010;product=membrane protein insertion efficiency factor YidD;protein_id=TGD95738.1;transl_table=11 PYKI01001079.1 Genbank gene 816 1175 . - . ID=gene-C9F07_10015;Name=C9F07_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10015 PYKI01001079.1 Protein Homology CDS 816 1175 . - 0 ID=cds-TGD95739.1;Parent=gene-C9F07_10015;Dbxref=NCBI_GP:TGD95739.1;Name=TGD95739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=C9F07_10015;product=ribonuclease P protein component;protein_id=TGD95739.1;transl_table=11 PYKI01001079.1 Genbank gene 1192 1332 . - . ID=gene-C9F07_10020;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=C9F07_10020 PYKI01001079.1 Protein Homology CDS 1192 1332 . - 0 ID=cds-TGD95740.1;Parent=gene-C9F07_10020;Dbxref=NCBI_GP:TGD95740.1;Name=TGD95740.1;gbkey=CDS;gene=rpmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=C9F07_10020;product=50S ribosomal protein L34;protein_id=TGD95740.1;transl_table=11 PYKI01001079.1 Genbank gene 1993 3139 . + . ID=gene-C9F07_10025;Name=C9F07_10025;end_range=3139,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10025;partial=true PYKI01001079.1 Protein Homology CDS 1993 3139 . + 0 ID=cds-TGD95741.1;Parent=gene-C9F07_10025;Dbxref=NCBI_GP:TGD95741.1;Name=TGD95741.1;end_range=3139,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=C9F07_10025;partial=true;product=chromosomal replication initiator protein DnaA;protein_id=TGD95741.1;transl_table=11 ##sequence-region PYKI01002780.1 1 539 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002780.1 Genbank region 1 539 . + . ID=PYKI01002780.1:1..539;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002780.1 Genbank gene 1 191 . - . ID=gene-C9F07_27760;Name=C9F07_27760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27760;partial=true;start_range=.,1 PYKI01002780.1 Protein Homology CDS 1 191 . - 0 ID=cds-TGD46291.1;Parent=gene-C9F07_27760;Dbxref=NCBI_GP:TGD46291.1;Name=TGD46291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457494.1;locus_tag=C9F07_27760;partial=true;product=YggU family protein;protein_id=TGD46291.1;start_range=.,1;transl_table=11 PYKI01002780.1 Genbank gene 188 539 . - . ID=gene-C9F07_27765;Name=C9F07_27765;end_range=539,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27765;partial=true PYKI01002780.1 Protein Homology CDS 188 539 . - 1 ID=cds-TGD46292.1;Parent=gene-C9F07_27765;Dbxref=NCBI_GP:TGD46292.1;Name=TGD46292.1;end_range=539,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457493.1;locus_tag=C9F07_27765;partial=true;product=hypothetical protein;protein_id=TGD46292.1;transl_table=11 ##sequence-region PYKI01003182.1 1 539 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003182.1 Genbank region 1 539 . + . ID=PYKI01003182.1:1..539;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003182.1 Genbank pseudogene 94 522 . - . ID=gene-C9F07_31925;Name=C9F07_31925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31925;pseudo=true PYKI01003182.1 Protein Homology CDS 94 522 . - 0 ID=cds-C9F07_31925;Parent=gene-C9F07_31925;Note=Zn-dependent%3B NAD(P)-binding%3B catalyzes the formation of tagatose-6-phosphate from galactitol-1-phosphate%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457645.1;locus_tag=C9F07_31925;product=galactitol-1-phosphate 5-dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01003533.1 1 539 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003533.1 Genbank region 1 539 . + . ID=PYKI01003533.1:1..539;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003533.1 Genbank gene 72 539 . + . ID=gene-C9F07_35680;Name=C9F07_35680;end_range=539,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35680;partial=true PYKI01003533.1 Protein Homology CDS 72 539 . + 0 ID=cds-TGD31209.1;Parent=gene-C9F07_35680;Dbxref=NCBI_GP:TGD31209.1;Name=TGD31209.1;end_range=539,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=C9F07_35680;partial=true;product=LysR family transcriptional regulator;protein_id=TGD31209.1;transl_table=11 ##sequence-region PYKI01001599.1 1 538 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001599.1 Genbank region 1 538 . + . ID=PYKI01001599.1:1..538;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001599.1 Genbank pseudogene 1 538 . + . ID=gene-C9F07_15270;Name=C9F07_15270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15270;pseudo=true PYKI01001599.1 Protein Homology CDS 1 538 . + 0 ID=cds-C9F07_15270;Parent=gene-C9F07_15270;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=C9F07_15270;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000156.1 1 537 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000156.1 Genbank region 1 537 . + . ID=PYKI01000156.1:1..537;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000156.1 Genbank gene 1 79 . + . ID=gene-C9F07_01070;Name=C9F07_01070;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F07_01070;partial=true;start_range=.,1 PYKI01000156.1 Genbank rRNA 1 79 . + . ID=rna-C9F07_01070;Parent=gene-C9F07_01070;gbkey=rRNA;locus_tag=C9F07_01070;partial=true;product=16S ribosomal RNA;start_range=.,1 PYKI01000156.1 Genbank exon 1 79 . + . ID=exon-C9F07_01070-1;Parent=rna-C9F07_01070;gbkey=rRNA;locus_tag=C9F07_01070;partial=true;product=16S ribosomal RNA;start_range=.,1 PYKI01000156.1 Genbank gene 137 213 . + . ID=gene-C9F07_01075;Name=C9F07_01075;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_01075 PYKI01000156.1 tRNAscan-SE tRNA 137 213 . + . ID=rna-C9F07_01075;Parent=gene-C9F07_01075;anticodon=(pos:171..173);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_01075;product=tRNA-Ile PYKI01000156.1 tRNAscan-SE exon 137 213 . + . ID=exon-C9F07_01075-1;Parent=rna-C9F07_01075;anticodon=(pos:171..173);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_01075;product=tRNA-Ile PYKI01000156.1 Genbank gene 325 400 . + . ID=gene-C9F07_01080;Name=C9F07_01080;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_01080 PYKI01000156.1 tRNAscan-SE tRNA 325 400 . + . ID=rna-C9F07_01080;Parent=gene-C9F07_01080;anticodon=(pos:358..360);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_01080;product=tRNA-Ala PYKI01000156.1 tRNAscan-SE exon 325 400 . + . ID=exon-C9F07_01080-1;Parent=rna-C9F07_01080;anticodon=(pos:358..360);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_01080;product=tRNA-Ala ##sequence-region PYKI01002919.1 1 537 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002919.1 Genbank region 1 537 . + . ID=PYKI01002919.1:1..537;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002919.1 Genbank pseudogene 59 466 . - . ID=gene-C9F07_29265;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=pseudogene;locus_tag=C9F07_29265;pseudo=true PYKI01002919.1 Protein Homology CDS 59 466 . - 0 ID=cds-C9F07_29265;Parent=gene-C9F07_29265;Note=Class B%3B non-specific%3B catalyzes the dephosphorylation of organic phosphomonoesters%3B also has phosphotransferase activity%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=aphA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458547.1;locus_tag=C9F07_29265;product=acid phosphatase AphA;pseudo=true;transl_table=11 ##sequence-region PYKI01000483.1 1 537 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000483.1 Genbank region 1 537 . + . ID=PYKI01000483.1:1..537;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000483.1 Genbank gene 1 537 . - . ID=gene-C9F07_03870;Name=C9F07_03870;end_range=537,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03870;partial=true;start_range=.,1 PYKI01000483.1 Protein Homology CDS 1 537 . - 0 ID=cds-TGE18561.1;Parent=gene-C9F07_03870;Dbxref=NCBI_GP:TGE18561.1;Name=TGE18561.1;end_range=537,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=C9F07_03870;partial=true;product=AsmA family protein;protein_id=TGE18561.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003367.1 1 536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003367.1 Genbank region 1 536 . + . ID=PYKI01003367.1:1..536;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003367.1 Genbank gene 1 536 . - . ID=gene-C9F07_33930;Name=clpX;end_range=536,.;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=C9F07_33930;partial=true;start_range=.,1 PYKI01003367.1 Protein Homology CDS 1 536 . - 1 ID=cds-TGD34705.1;Parent=gene-C9F07_33930;Dbxref=NCBI_GP:TGD34705.1;Name=TGD34705.1;Note=binds and unfolds substrates as part of the ClpXP protease;end_range=536,.;gbkey=CDS;gene=clpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=C9F07_33930;partial=true;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=TGD34705.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002180.1 1 536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002180.1 Genbank region 1 536 . + . ID=PYKI01002180.1:1..536;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002180.1 Genbank pseudogene 1 234 . + . ID=gene-C9F07_21185;Name=C9F07_21185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21185;pseudo=true PYKI01002180.1 Protein Homology CDS 1 234 . + 0 ID=cds-C9F07_21185;Parent=gene-C9F07_21185;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460827.1;locus_tag=C9F07_21185;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002180.1 Genbank pseudogene 241 536 . + . ID=gene-C9F07_21190;Name=C9F07_21190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21190;pseudo=true PYKI01002180.1 Protein Homology CDS 241 536 . + 0 ID=cds-C9F07_21190;Parent=gene-C9F07_21190;Note=The RecE (also known as exonuclease VIII) pathway is an alternative pathway for the initiation of homologous recombination in Escherichia coli. The RecE pathway is activated in recB%2C recC sbcA (suppressors of recB and recC) mutants. Activation of the RecE pathway results in the production of at least two phage proteins relevant for recombinational repair. RecE is a duplex DNA-specific exonuclease which produces 3' overhangs in duplex DNA by preferentially degrading the 5'-ending strands. Recombinational repair of E.coli chromosomal DNA involves as well other proteins: RecA%2C RecF%2C RecJ%2C RecO%2C RecR%2C and RuvC.%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309961.1;locus_tag=C9F07_21190;product=exonuclease VIII;pseudo=true;transl_table=11 ##sequence-region PYKI01000213.1 1 536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000213.1 Genbank region 1 536 . + . ID=PYKI01000213.1:1..536;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000213.1 Genbank gene 1 196 . - . ID=gene-C9F07_01405;Name=C9F07_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01405;partial=true;start_range=.,1 PYKI01000213.1 Protein Homology CDS 1 196 . - 0 ID=cds-TGE30016.1;Parent=gene-C9F07_01405;Dbxref=NCBI_GP:TGE30016.1;Name=TGE30016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457578.3;locus_tag=C9F07_01405;partial=true;product=outer membrane channel protein TolC;protein_id=TGE30016.1;start_range=.,1;transl_table=11 PYKI01000213.1 Genbank gene 397 536 . + . ID=gene-C9F07_01410;Name=nudF;end_range=536,.;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=C9F07_01410;partial=true PYKI01000213.1 Protein Homology CDS 397 536 . + 0 ID=cds-TGE30017.1;Parent=gene-C9F07_01410;Dbxref=NCBI_GP:TGE30017.1;Name=TGE30017.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;end_range=536,.;gbkey=CDS;gene=nudF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457577.1;locus_tag=C9F07_01410;partial=true;product=ADP-ribose diphosphatase;protein_id=TGE30017.1;transl_table=11 ##sequence-region PYKI01003039.1 1 3136 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003039.1 Genbank region 1 3136 . + . ID=PYKI01003039.1:1..3136;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003039.1 Genbank gene 1 268 . + . ID=gene-C9F07_30510;Name=C9F07_30510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30510;partial=true;start_range=.,1 PYKI01003039.1 Protein Homology CDS 1 268 . + 1 ID=cds-TGD41049.1;Parent=gene-C9F07_30510;Dbxref=NCBI_GP:TGD41049.1;Name=TGD41049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456857.1;locus_tag=C9F07_30510;partial=true;product=chemotaxis protein CheV;protein_id=TGD41049.1;start_range=.,1;transl_table=11 PYKI01003039.1 Genbank gene 409 1866 . - . ID=gene-C9F07_30515;Name=C9F07_30515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30515 PYKI01003039.1 Protein Homology CDS 409 1866 . - 0 ID=cds-TGD41050.1;Parent=gene-C9F07_30515;Dbxref=NCBI_GP:TGD41050.1;Name=TGD41050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=C9F07_30515;product=NADH-quinone oxidoreductase subunit N;protein_id=TGD41050.1;transl_table=11 PYKI01003039.1 Genbank gene 1873 3136 . - . ID=gene-C9F07_30520;Name=C9F07_30520;end_range=3136,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30520;partial=true PYKI01003039.1 Protein Homology CDS 1873 3136 . - 1 ID=cds-TGD41051.1;Parent=gene-C9F07_30520;Dbxref=NCBI_GP:TGD41051.1;Name=TGD41051.1;end_range=3136,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=C9F07_30520;partial=true;product=NADH-quinone oxidoreductase subunit M;protein_id=TGD41051.1;transl_table=11 ##sequence-region PYKI01000136.1 1 536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000136.1 Genbank region 1 536 . + . ID=PYKI01000136.1:1..536;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000136.1 Genbank gene 1 536 . + . ID=gene-C9F07_00915;Name=C9F07_00915;end_range=536,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00915;partial=true;start_range=.,1 PYKI01000136.1 Protein Homology CDS 1 536 . + 0 ID=cds-TGE30090.1;Parent=gene-C9F07_00915;Dbxref=NCBI_GP:TGE30090.1;Name=TGE30090.1;end_range=536,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=C9F07_00915;partial=true;product=dimethyl sulfoxide reductase subunit A;protein_id=TGE30090.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002122.1 1 535 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002122.1 Genbank region 1 535 . + . ID=PYKI01002122.1:1..535;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002122.1 Genbank gene 1 521 . - . ID=gene-C9F07_20540;Name=C9F07_20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20540;partial=true;start_range=.,1 PYKI01002122.1 Protein Homology CDS 1 521 . - 0 ID=cds-TGD58318.1;Parent=gene-C9F07_20540;Dbxref=NCBI_GP:TGD58318.1;Name=TGD58318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015690869.1;locus_tag=C9F07_20540;partial=true;product=acyltransferase;protein_id=TGD58318.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002669.1 1 535 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002669.1 Genbank region 1 535 . + . ID=PYKI01002669.1:1..535;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002669.1 Genbank pseudogene 63 320 . + . ID=gene-C9F07_26590;Name=C9F07_26590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26590;pseudo=true PYKI01002669.1 Protein Homology CDS 63 320 . + 0 ID=cds-C9F07_26590;Parent=gene-C9F07_26590;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=C9F07_26590;product=rod shape-determining protein MreC;pseudo=true;transl_table=11 PYKI01002669.1 Genbank gene 323 535 . + . ID=gene-C9F07_26595;Name=mreD;end_range=535,.;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=C9F07_26595;partial=true PYKI01002669.1 Protein Homology CDS 323 535 . + 0 ID=cds-TGD48978.1;Parent=gene-C9F07_26595;Dbxref=NCBI_GP:TGD48978.1;Name=TGD48978.1;end_range=535,.;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=C9F07_26595;partial=true;product=rod shape-determining protein MreD;protein_id=TGD48978.1;transl_table=11 ##sequence-region PYKI01002044.1 1 534 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002044.1 Genbank region 1 534 . + . ID=PYKI01002044.1:1..534;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002044.1 Genbank pseudogene 1 182 . + . ID=gene-C9F07_19770;Name=C9F07_19770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19770;pseudo=true PYKI01002044.1 Protein Homology CDS 1 182 . + 2 ID=cds-C9F07_19770;Parent=gene-C9F07_19770;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344018.1;locus_tag=C9F07_19770;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002044.1 Genbank gene 296 534 . + . ID=gene-C9F07_19775;Name=C9F07_19775;end_range=534,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19775;partial=true PYKI01002044.1 Protein Homology CDS 296 534 . + 0 ID=cds-TGD59981.1;Parent=gene-C9F07_19775;Dbxref=NCBI_GP:TGD59981.1;Name=TGD59981.1;end_range=534,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=C9F07_19775;partial=true;product=acetylneuraminate ABC transporter;protein_id=TGD59981.1;transl_table=11 ##sequence-region PYKI01002987.1 1 533 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002987.1 Genbank region 1 533 . + . ID=PYKI01002987.1:1..533;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002987.1 Genbank gene 1 372 . - . ID=gene-C9F07_29995;Name=C9F07_29995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29995;partial=true;start_range=.,1 PYKI01002987.1 Protein Homology CDS 1 372 . - 0 ID=cds-TGD41387.1;Parent=gene-C9F07_29995;Dbxref=NCBI_GP:TGD41387.1;Name=TGD41387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458586.1;locus_tag=C9F07_29995;partial=true;product=aminoalkylphosphonate N-acetyltransferase;protein_id=TGD41387.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000250.1 1 533 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000250.1 Genbank region 1 533 . + . ID=PYKI01000250.1:1..533;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000250.1 Genbank gene 112 533 . + . ID=gene-C9F07_01635;Name=C9F07_01635;end_range=533,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01635;partial=true PYKI01000250.1 Protein Homology CDS 112 533 . + 0 ID=cds-TGE27858.1;Parent=gene-C9F07_01635;Dbxref=NCBI_GP:TGE27858.1;Name=TGE27858.1;end_range=533,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455750.1;locus_tag=C9F07_01635;partial=true;product=thymidine kinase;protein_id=TGE27858.1;transl_table=11 ##sequence-region PYKI01000021.1 1 533 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000021.1 Genbank region 1 533 . + . ID=PYKI01000021.1:1..533;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000021.1 Genbank pseudogene 66 533 . + . ID=gene-C9F07_00125;Name=C9F07_00125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00125;pseudo=true PYKI01000021.1 Protein Homology CDS 66 533 . + 0 ID=cds-C9F07_00125;Parent=gene-C9F07_00125;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=C9F07_00125;product=large repetitive protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001502.1 1 532 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001502.1 Genbank region 1 532 . + . ID=PYKI01001502.1:1..532;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001502.1 Genbank pseudogene 40 153 . - . ID=gene-C9F07_14295;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=pseudogene;locus_tag=C9F07_14295;pseudo=true PYKI01001502.1 Protein Homology CDS 40 153 . - 0 ID=cds-C9F07_14295;Parent=gene-C9F07_14295;Note=involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458427.1;locus_tag=C9F07_14295;product=nitrite reductase small subunit;pseudo=true;transl_table=11 PYKI01001502.1 Genbank gene 150 532 . - . ID=gene-C9F07_14300;Name=C9F07_14300;end_range=532,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14300;partial=true PYKI01001502.1 Protein Homology CDS 150 532 . - 2 ID=cds-TGD78119.1;Parent=gene-C9F07_14300;Dbxref=NCBI_GP:TGD78119.1;Name=TGD78119.1;end_range=532,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458428.1;locus_tag=C9F07_14300;partial=true;product=hypothetical protein;protein_id=TGD78119.1;transl_table=11 ##sequence-region PYKI01001954.1 1 3127 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001954.1 Genbank region 1 3127 . + . ID=PYKI01001954.1:1..3127;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001954.1 Genbank gene 1 192 . + . ID=gene-C9F07_18855;Name=C9F07_18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18855;partial=true;start_range=.,1 PYKI01001954.1 Protein Homology CDS 1 192 . + 0 ID=cds-TGD60466.1;Parent=gene-C9F07_18855;Dbxref=NCBI_GP:TGD60466.1;Name=TGD60466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455106.1;locus_tag=C9F07_18855;partial=true;product=methionine ABC transporter ATP-binding protein;protein_id=TGD60466.1;start_range=.,1;transl_table=11 PYKI01001954.1 Genbank gene 185 844 . + . ID=gene-C9F07_18860;Name=C9F07_18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18860 PYKI01001954.1 Protein Homology CDS 185 844 . + 0 ID=cds-TGD60467.1;Parent=gene-C9F07_18860;Dbxref=NCBI_GP:TGD60467.1;Name=TGD60467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455107.1;locus_tag=C9F07_18860;product=methionine ABC transporter permease;protein_id=TGD60467.1;transl_table=11 PYKI01001954.1 Genbank gene 883 1968 . - . ID=gene-C9F07_18865;Name=C9F07_18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18865 PYKI01001954.1 Protein Homology CDS 883 1968 . - 0 ID=cds-TGD60468.1;Parent=gene-C9F07_18865;Dbxref=NCBI_GP:TGD60468.1;Name=TGD60468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021868.1;locus_tag=C9F07_18865;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=TGD60468.1;transl_table=11 PYKI01001954.1 Genbank gene 2064 3089 . - . ID=gene-C9F07_18870;Name=C9F07_18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18870 PYKI01001954.1 Protein Homology CDS 2064 3089 . - 0 ID=cds-TGD60469.1;Parent=gene-C9F07_18870;Dbxref=NCBI_GP:TGD60469.1;Name=TGD60469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541673.1;locus_tag=C9F07_18870;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=TGD60469.1;transl_table=11 ##sequence-region PYKI01002999.1 1 532 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002999.1 Genbank region 1 532 . + . ID=PYKI01002999.1:1..532;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002999.1 Genbank pseudogene 112 532 . + . ID=gene-C9F07_30080;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=pseudogene;locus_tag=C9F07_30080;pseudo=true PYKI01002999.1 Protein Homology CDS 112 532 . + 0 ID=cds-C9F07_30080;Parent=gene-C9F07_30080;Note=Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil%2C respectively%3B pyrimidine-specific%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=rihA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455230.1;locus_tag=C9F07_30080;product=pyrimidine-specific ribonucleoside hydrolase RihA;pseudo=true;transl_table=11 ##sequence-region PYKI01001052.1 1 531 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001052.1 Genbank region 1 531 . + . ID=PYKI01001052.1:1..531;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001052.1 Genbank gene 1 517 . - . ID=gene-C9F07_09730;Name=C9F07_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09730;partial=true;start_range=.,1 PYKI01001052.1 Protein Homology CDS 1 517 . - 0 ID=cds-TGD96367.1;Parent=gene-C9F07_09730;Dbxref=NCBI_GP:TGD96367.1;Name=TGD96367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001002009.1;locus_tag=C9F07_09730;partial=true;product=invasin;protein_id=TGD96367.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003137.1 1 531 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003137.1 Genbank region 1 531 . + . ID=PYKI01003137.1:1..531;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003137.1 Genbank gene 119 376 . - . ID=gene-C9F07_31415;Name=C9F07_31415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31415 PYKI01003137.1 Protein Homology CDS 119 376 . - 0 ID=cds-TGD38737.1;Parent=gene-C9F07_31415;Dbxref=NCBI_GP:TGD38737.1;Name=TGD38737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112996.1;locus_tag=C9F07_31415;product=hypothetical protein;protein_id=TGD38737.1;transl_table=11 ##sequence-region PYKI01002072.1 1 531 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002072.1 Genbank region 1 531 . + . ID=PYKI01002072.1:1..531;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002072.1 Genbank gene 1 244 . + . ID=gene-C9F07_20090;Name=C9F07_20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20090;partial=true;start_range=.,1 PYKI01002072.1 Protein Homology CDS 1 244 . + 1 ID=cds-TGD59328.1;Parent=gene-C9F07_20090;Dbxref=NCBI_GP:TGD59328.1;Name=TGD59328.1;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=C9F07_20090;partial=true;product=septum site-determining protein MinD;protein_id=TGD59328.1;start_range=.,1;transl_table=11 PYKI01002072.1 Genbank gene 248 523 . + . ID=gene-C9F07_20095;Name=C9F07_20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20095 PYKI01002072.1 Protein Homology CDS 248 523 . + 0 ID=cds-TGD59329.1;Parent=gene-C9F07_20095;Dbxref=NCBI_GP:TGD59329.1;Name=TGD59329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456323.1;locus_tag=C9F07_20095;product=cell division topological specificity factor MinE;protein_id=TGD59329.1;transl_table=11 ##sequence-region PYKI01000244.1 1 530 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000244.1 Genbank region 1 530 . + . ID=PYKI01000244.1:1..530;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000244.1 Genbank pseudogene 1 530 . - . ID=gene-C9F07_01600;Name=C9F07_01600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01600;pseudo=true PYKI01000244.1 Protein Homology CDS 1 530 . - 1 ID=cds-C9F07_01600;Parent=gene-C9F07_01600;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454886.1;locus_tag=C9F07_01600;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002085.1 1 530 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002085.1 Genbank region 1 530 . + . ID=PYKI01002085.1:1..530;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002085.1 Genbank pseudogene 64 420 . - . ID=gene-C9F07_20225;Name=C9F07_20225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20225;pseudo=true PYKI01002085.1 Protein Homology CDS 64 420 . - 0 ID=cds-C9F07_20225;Parent=gene-C9F07_20225;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457443.1;locus_tag=C9F07_20225;product=flavodoxin FldB;pseudo=true;transl_table=11 ##sequence-region PYKI01003382.1 1 530 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003382.1 Genbank region 1 530 . + . ID=PYKI01003382.1:1..530;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003382.1 Genbank gene 1 234 . - . ID=gene-C9F07_34050;Name=C9F07_34050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34050;partial=true;start_range=.,1 PYKI01003382.1 Protein Homology CDS 1 234 . - 0 ID=cds-TGD34292.1;Parent=gene-C9F07_34050;Dbxref=NCBI_GP:TGD34292.1;Name=TGD34292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458857.1;locus_tag=C9F07_34050;partial=true;product=glycine dehydrogenase;protein_id=TGD34292.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003211.1 1 530 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003211.1 Genbank region 1 530 . + . ID=PYKI01003211.1:1..530;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003211.1 Genbank pseudogene 1 530 . - . ID=gene-C9F07_32290;Name=C9F07_32290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32290;pseudo=true PYKI01003211.1 Protein Homology CDS 1 530 . - 0 ID=cds-C9F07_32290;Parent=gene-C9F07_32290;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462495.1;locus_tag=C9F07_32290;product=oligopeptidase A;pseudo=true;transl_table=11 ##sequence-region PYKI01003517.1 1 529 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003517.1 Genbank region 1 529 . + . ID=PYKI01003517.1:1..529;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003517.1 Genbank gene 1 102 . - . ID=gene-C9F07_35475;Name=C9F07_35475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35475;partial=true;start_range=.,1 PYKI01003517.1 Protein Homology CDS 1 102 . - 0 ID=cds-TGD31548.1;Parent=gene-C9F07_35475;Dbxref=NCBI_GP:TGD31548.1;Name=TGD31548.1;Note=binds specifically to the major sigma factor sigma 70%3B active in stationary phase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=C9F07_35475;partial=true;product=Rsd/AlgQ family anti-sigma factor;protein_id=TGD31548.1;start_range=.,1;transl_table=11 PYKI01003517.1 Genbank gene 195 529 . + . ID=gene-C9F07_35480;Name=C9F07_35480;end_range=529,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35480;partial=true PYKI01003517.1 Protein Homology CDS 195 529 . + 0 ID=cds-TGD31549.1;Parent=gene-C9F07_35480;Dbxref=NCBI_GP:TGD31549.1;Name=TGD31549.1;end_range=529,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457908.1;locus_tag=C9F07_35480;partial=true;product=hypothetical protein;protein_id=TGD31549.1;transl_table=11 ##sequence-region PYKI01002850.1 1 529 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002850.1 Genbank region 1 529 . + . ID=PYKI01002850.1:1..529;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002850.1 Genbank gene 63 494 . + . ID=gene-C9F07_28490;Name=C9F07_28490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28490 PYKI01002850.1 Protein Homology CDS 63 494 . + 0 ID=cds-TGD45540.1;Parent=gene-C9F07_28490;Dbxref=NCBI_GP:TGD45540.1;Name=TGD45540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458195.1;locus_tag=C9F07_28490;product=dUTP diphosphatase;protein_id=TGD45540.1;transl_table=11 ##sequence-region PYKI01000312.1 1 3124 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000312.1 Genbank region 1 3124 . + . ID=PYKI01000312.1:1..3124;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000312.1 Genbank gene 891 3089 . + . ID=gene-C9F07_02130;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=C9F07_02130 PYKI01000312.1 Protein Homology CDS 891 3089 . + 0 ID=cds-TGE27773.1;Parent=gene-C9F07_02130;Dbxref=NCBI_GP:TGE27773.1;Name=TGE27773.1;gbkey=CDS;gene=speF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=C9F07_02130;product=ornithine decarboxylase SpeF;protein_id=TGE27773.1;transl_table=11 ##sequence-region PYKI01002440.1 1 528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002440.1 Genbank region 1 528 . + . ID=PYKI01002440.1:1..528;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002440.1 Genbank gene 1 424 . + . ID=gene-C9F07_24120;Name=C9F07_24120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24120;partial=true;start_range=.,1 PYKI01002440.1 Protein Homology CDS 1 424 . + 1 ID=cds-TGD51069.1;Parent=gene-C9F07_24120;Dbxref=NCBI_GP:TGD51069.1;Name=TGD51069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455441.1;locus_tag=C9F07_24120;partial=true;product=LysR family transcriptional regulator;protein_id=TGD51069.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003545.1 1 528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003545.1 Genbank region 1 528 . + . ID=PYKI01003545.1:1..528;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003545.1 Genbank gene 1 528 . - . ID=gene-C9F07_35780;Name=C9F07_35780;end_range=528,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35780;partial=true;start_range=.,1 PYKI01003545.1 Protein Homology CDS 1 528 . - 0 ID=cds-TGD30939.1;Parent=gene-C9F07_35780;Dbxref=NCBI_GP:TGD30939.1;Name=TGD30939.1;end_range=528,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457032.1;locus_tag=C9F07_35780;partial=true;product=uracil permease;protein_id=TGD30939.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000259.1 1 527 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000259.1 Genbank region 1 527 . + . ID=PYKI01000259.1:1..527;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000259.1 Genbank gene 1 252 . - . ID=gene-C9F07_01685;Name=C9F07_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01685;partial=true;start_range=.,1 PYKI01000259.1 Protein Homology CDS 1 252 . - 0 ID=cds-TGE27852.1;Parent=gene-C9F07_01685;Dbxref=NCBI_GP:TGE27852.1;Name=TGE27852.1;Note=involved in the transport of inorganic phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458328.1;locus_tag=C9F07_01685;partial=true;product=anion permease;protein_id=TGE27852.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001570.1 1 527 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001570.1 Genbank region 1 527 . + . ID=PYKI01001570.1:1..527;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001570.1 Genbank gene 1 225 . + . ID=gene-C9F07_15025;Name=C9F07_15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15025;partial=true;start_range=.,1 PYKI01001570.1 Protein Homology CDS 1 225 . + 0 ID=cds-TGD73273.1;Parent=gene-C9F07_15025;Dbxref=NCBI_GP:TGD73273.1;Name=TGD73273.1;Note=regulates the synthesis and expression of the dsdXA operon and dadA gene;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=C9F07_15025;partial=true;product=DNA-binding transcriptional regulator DsdC;protein_id=TGD73273.1;start_range=.,1;transl_table=11 PYKI01001570.1 Genbank gene 289 527 . + . ID=gene-C9F07_15030;Name=C9F07_15030;end_range=527,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15030;partial=true PYKI01001570.1 Protein Homology CDS 289 527 . + 0 ID=cds-TGD73274.1;Parent=gene-C9F07_15030;Dbxref=NCBI_GP:TGD73274.1;Name=TGD73274.1;end_range=527,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=C9F07_15030;partial=true;product=hypothetical protein;protein_id=TGD73274.1;transl_table=11 ##sequence-region PYKI01003142.1 1 527 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003142.1 Genbank region 1 527 . + . ID=PYKI01003142.1:1..527;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003142.1 Genbank gene 327 527 . - . ID=gene-C9F07_31455;Name=C9F07_31455;end_range=527,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31455;partial=true PYKI01003142.1 Protein Homology CDS 327 527 . - 0 ID=cds-TGD38720.1;Parent=gene-C9F07_31455;Dbxref=NCBI_GP:TGD38720.1;Name=TGD38720.1;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;end_range=527,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455750.1;locus_tag=C9F07_31455;partial=true;product=thymidine kinase;protein_id=TGD38720.1;transl_table=11 ##sequence-region PYKI01001067.1 1 527 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001067.1 Genbank region 1 527 . + . ID=PYKI01001067.1:1..527;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001067.1 Genbank pseudogene 48 464 . - . ID=gene-C9F07_09840;Name=C9F07_09840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09840;pseudo=true PYKI01001067.1 Protein Homology CDS 48 464 . - 0 ID=cds-C9F07_09840;Parent=gene-C9F07_09840;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001640754.1;locus_tag=C9F07_09840;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002912.1 1 526 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002912.1 Genbank region 1 526 . + . ID=PYKI01002912.1:1..526;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002912.1 Genbank gene 1 526 . + . ID=gene-C9F07_29160;Name=C9F07_29160;end_range=526,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29160;partial=true;start_range=.,1 PYKI01002912.1 Protein Homology CDS 1 526 . + 1 ID=cds-TGD43414.1;Parent=gene-C9F07_29160;Dbxref=NCBI_GP:TGD43414.1;Name=TGD43414.1;Note=with GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol%3B subunit IIC forms the translocation channel and contains the substrate binding site;end_range=526,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462681.1;locus_tag=C9F07_29160;partial=true;product=PTS galactitol transporter subunit IIC;protein_id=TGD43414.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002527.1 1 526 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002527.1 Genbank region 1 526 . + . ID=PYKI01002527.1:1..526;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002527.1 Genbank gene 1 526 . - . ID=gene-C9F07_25085;Name=C9F07_25085;end_range=526,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25085;partial=true;start_range=.,1 PYKI01002527.1 Protein Homology CDS 1 526 . - 1 ID=cds-TGD50062.1;Parent=gene-C9F07_25085;Dbxref=NCBI_GP:TGD50062.1;Name=TGD50062.1;end_range=526,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457957.1;locus_tag=C9F07_25085;partial=true;product=primosomal protein N';protein_id=TGD50062.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000454.1 1 526 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000454.1 Genbank region 1 526 . + . ID=PYKI01000454.1:1..526;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000454.1 Genbank gene 1 165 . - . ID=gene-C9F07_03525;Name=C9F07_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03525;partial=true;start_range=.,1 PYKI01000454.1 Protein Homology CDS 1 165 . - 0 ID=cds-TGE19971.1;Parent=gene-C9F07_03525;Dbxref=NCBI_GP:TGE19971.1;Name=TGE19971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456789.1;locus_tag=C9F07_03525;partial=true;product=virulence protein MsgA;protein_id=TGE19971.1;start_range=.,1;transl_table=11 PYKI01000454.1 Genbank gene 207 283 . - . ID=gene-C9F07_03530;Name=C9F07_03530;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_03530 PYKI01000454.1 tRNAscan-SE tRNA 207 283 . - . ID=rna-C9F07_03530;Parent=gene-C9F07_03530;anticodon=(pos:complement(247..249));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_03530;product=tRNA-Pro PYKI01000454.1 tRNAscan-SE exon 207 283 . - . ID=exon-C9F07_03530-1;Parent=rna-C9F07_03530;anticodon=(pos:complement(247..249));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_03530;product=tRNA-Pro PYKI01000454.1 Genbank gene 357 526 . - . ID=gene-C9F07_03535;Name=C9F07_03535;end_range=526,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03535;partial=true PYKI01000454.1 Protein Homology CDS 357 526 . - 2 ID=cds-TGE19972.1;Parent=gene-C9F07_03535;Dbxref=NCBI_GP:TGE19972.1;Name=TGE19972.1;end_range=526,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456786.1;locus_tag=C9F07_03535;partial=true;product=phosphodiesterase;protein_id=TGE19972.1;transl_table=11 ##sequence-region PYKI01000778.1 1 3121 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000778.1 Genbank region 1 3121 . + . ID=PYKI01000778.1:1..3121;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000778.1 Genbank gene 1 804 . + . ID=gene-C9F07_07000;Name=C9F07_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07000;partial=true;start_range=.,1 PYKI01000778.1 Protein Homology CDS 1 804 . + 0 ID=cds-TGE09175.1;Parent=gene-C9F07_07000;Dbxref=NCBI_GP:TGE09175.1;Name=TGE09175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=C9F07_07000;partial=true;product=DNA polymerase III subunit beta;protein_id=TGE09175.1;start_range=.,1;transl_table=11 PYKI01000778.1 Genbank pseudogene 779 1028 . + . ID=gene-C9F07_07005;Name=C9F07_07005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07005;pseudo=true PYKI01000778.1 Protein Homology CDS 779 1028 . + 0 ID=cds-C9F07_07005;Parent=gene-C9F07_07005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001148015.1;locus_tag=C9F07_07005;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000778.1 Genbank gene 1035 2108 . + . ID=gene-C9F07_07010;Name=C9F07_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07010 PYKI01000778.1 Protein Homology CDS 1035 2108 . + 0 ID=cds-TGE09176.1;Parent=gene-C9F07_07010;Dbxref=NCBI_GP:TGE09176.1;Name=TGE09176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=C9F07_07010;product=DNA replication and repair protein RecF;protein_id=TGE09176.1;transl_table=11 PYKI01000778.1 Genbank gene 2137 3121 . + . ID=gene-C9F07_07015;Name=C9F07_07015;end_range=3121,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07015;partial=true PYKI01000778.1 Protein Homology CDS 2137 3121 . + 0 ID=cds-TGE09177.1;Parent=gene-C9F07_07015;Dbxref=NCBI_GP:TGE09177.1;Name=TGE09177.1;end_range=3121,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458107.1;locus_tag=C9F07_07015;partial=true;product=hypothetical protein;protein_id=TGE09177.1;transl_table=11 ##sequence-region PYKI01000684.1 1 525 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000684.1 Genbank region 1 525 . + . ID=PYKI01000684.1:1..525;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000684.1 Genbank pseudogene 1 461 . + . ID=gene-C9F07_05970;Name=C9F07_05970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05970;pseudo=true PYKI01000684.1 Protein Homology CDS 1 461 . + 2 ID=cds-C9F07_05970;Parent=gene-C9F07_05970;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=C9F07_05970;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001686.1 1 524 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001686.1 Genbank region 1 524 . + . ID=PYKI01001686.1:1..524;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001686.1 Genbank pseudogene 1 512 . + . ID=gene-C9F07_16100;Name=C9F07_16100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16100;pseudo=true PYKI01001686.1 Protein Homology CDS 1 512 . + 2 ID=cds-C9F07_16100;Parent=gene-C9F07_16100;Note=catalyzes the degradation of histidine to urocanate and ammmonia%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=C9F07_16100;product=histidine ammonia-lyase;pseudo=true;transl_table=11 ##sequence-region PYKI01000779.1 1 524 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000779.1 Genbank region 1 524 . + . ID=PYKI01000779.1:1..524;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000779.1 Genbank pseudogene 83 524 . - . ID=gene-C9F07_07020;Name=C9F07_07020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07020;pseudo=true PYKI01000779.1 Protein Homology CDS 83 524 . - 1 ID=cds-C9F07_07020;Parent=gene-C9F07_07020;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455609.1;locus_tag=C9F07_07020;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000434.1 1 523 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000434.1 Genbank region 1 523 . + . ID=PYKI01000434.1:1..523;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000434.1 Genbank gene 1 452 . + . ID=gene-C9F07_03340;Name=C9F07_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03340;partial=true;start_range=.,1 PYKI01000434.1 Protein Homology CDS 1 452 . + 2 ID=cds-TGE20831.1;Parent=gene-C9F07_03340;Dbxref=NCBI_GP:TGE20831.1;Name=TGE20831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456947.1;locus_tag=C9F07_03340;partial=true;product=hypothetical protein;protein_id=TGE20831.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001432.1 1 521 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001432.1 Genbank region 1 521 . + . ID=PYKI01001432.1:1..521;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001432.1 Genbank pseudogene 59 460 . - . ID=gene-C9F07_13565;Name=C9F07_13565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13565;pseudo=true PYKI01001432.1 Protein Homology CDS 59 460 . - 0 ID=cds-C9F07_13565;Parent=gene-C9F07_13565;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456489.1;locus_tag=C9F07_13565;product=flagellar motor stator protein MotA;pseudo=true;transl_table=11 ##sequence-region PYKI01003157.1 1 520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003157.1 Genbank region 1 520 . + . ID=PYKI01003157.1:1..520;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003157.1 Genbank gene 77 355 . + . ID=gene-C9F07_31660;Name=C9F07_31660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31660 PYKI01003157.1 Protein Homology CDS 77 355 . + 0 ID=cds-TGD38324.1;Parent=gene-C9F07_31660;Dbxref=NCBI_GP:TGD38324.1;Name=TGD38324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341252.1;locus_tag=C9F07_31660;product=hypothetical protein;protein_id=TGD38324.1;transl_table=11 PYKI01003157.1 Genbank gene 315 520 . + . ID=gene-C9F07_31665;Name=C9F07_31665;end_range=520,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31665;partial=true PYKI01003157.1 Protein Homology CDS 315 520 . + 0 ID=cds-TGD38325.1;Parent=gene-C9F07_31665;Dbxref=NCBI_GP:TGD38325.1;Name=TGD38325.1;end_range=520,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457928.1;locus_tag=C9F07_31665;partial=true;product=UDP-N-acetylmuramate dehydrogenase;protein_id=TGD38325.1;transl_table=11 ##sequence-region PYKI01001829.1 1 520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001829.1 Genbank region 1 520 . + . ID=PYKI01001829.1:1..520;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001829.1 Genbank gene 1 135 . + . ID=gene-C9F07_17585;Name=C9F07_17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17585;partial=true;start_range=.,1 PYKI01001829.1 Protein Homology CDS 1 135 . + 0 ID=cds-TGD64280.1;Parent=gene-C9F07_17585;Dbxref=NCBI_GP:TGD64280.1;Name=TGD64280.1;Note=PhnO in Salmonella enterica catalyzes the acetylation of a range of aminoalkylphosphonic acids%3B part of the biochemical pathway that enables the cell to use phosphonates as a phosphorus source%3B Escherichia coli uses a different mechanism of phosphonate catabolism where PhnO is not essential and seems to play a regulatory role;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458586.1;locus_tag=C9F07_17585;partial=true;product=aminoalkylphosphonic acid N-acetyltransferase;protein_id=TGD64280.1;start_range=.,1;transl_table=11 PYKI01001829.1 Genbank gene 393 520 . + . ID=gene-C9F07_17590;Name=C9F07_17590;end_range=520,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17590;partial=true PYKI01001829.1 Protein Homology CDS 393 520 . + 0 ID=cds-TGD64281.1;Parent=gene-C9F07_17590;Dbxref=NCBI_GP:TGD64281.1;Name=TGD64281.1;end_range=520,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458585.1;locus_tag=C9F07_17590;partial=true;product=lipid A hydroxylase LpxO;protein_id=TGD64281.1;transl_table=11 ##sequence-region PYKI01001260.1 1 520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001260.1 Genbank region 1 520 . + . ID=PYKI01001260.1:1..520;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001260.1 Genbank pseudogene 1 505 . - . ID=gene-C9F07_11770;Name=C9F07_11770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11770;pseudo=true PYKI01001260.1 Protein Homology CDS 1 505 . - 0 ID=cds-C9F07_11770;Parent=gene-C9F07_11770;Note=citryl-ACP lyase%3B catalyzes the formation of acetate and oxaloacetate from citrate%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=C9F07_11770;product=citrate lyase subunit beta;pseudo=true;transl_table=11 ##sequence-region PYKI01002756.1 1 520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002756.1 Genbank region 1 520 . + . ID=PYKI01002756.1:1..520;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002756.1 Genbank pseudogene 94 520 . - . ID=gene-C9F07_27505;Name=C9F07_27505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27505;pseudo=true PYKI01002756.1 Protein Homology CDS 94 520 . - 1 ID=cds-C9F07_27505;Parent=gene-C9F07_27505;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176636.1;locus_tag=C9F07_27505;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01002920.1 1 3114 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002920.1 Genbank region 1 3114 . + . ID=PYKI01002920.1:1..3114;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002920.1 Genbank gene 1 1067 . - . ID=gene-C9F07_29270;Name=C9F07_29270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29270;partial=true;start_range=.,1 PYKI01002920.1 Protein Homology CDS 1 1067 . - 0 ID=cds-TGD43113.1;Parent=gene-C9F07_29270;Dbxref=NCBI_GP:TGD43113.1;Name=TGD43113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457006.1;locus_tag=C9F07_29270;partial=true;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=TGD43113.1;start_range=.,1;transl_table=11 PYKI01002920.1 Genbank gene 1069 1269 . + . ID=gene-C9F07_29275;Name=C9F07_29275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29275 PYKI01002920.1 Protein Homology CDS 1069 1269 . + 0 ID=cds-TGD43114.1;Parent=gene-C9F07_29275;Dbxref=NCBI_GP:TGD43114.1;Name=TGD43114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653373.1;locus_tag=C9F07_29275;product=hypothetical protein;protein_id=TGD43114.1;transl_table=11 PYKI01002920.1 Genbank gene 1339 2289 . + . ID=gene-C9F07_29280;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=C9F07_29280 PYKI01002920.1 Protein Homology CDS 1339 2289 . + 0 ID=cds-TGD43115.1;Parent=gene-C9F07_29280;Dbxref=NCBI_GP:TGD43115.1;Name=TGD43115.1;gbkey=CDS;gene=tal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=C9F07_29280;product=transaldolase;protein_id=TGD43115.1;transl_table=11 PYKI01002920.1 Genbank gene 2309 3114 . + . ID=gene-C9F07_29285;Name=C9F07_29285;end_range=3114,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29285;partial=true PYKI01002920.1 Protein Homology CDS 2309 3114 . + 0 ID=cds-TGD43116.1;Parent=gene-C9F07_29285;Dbxref=NCBI_GP:TGD43116.1;Name=TGD43116.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;end_range=3114,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=C9F07_29285;partial=true;product=transketolase;protein_id=TGD43116.1;transl_table=11 ##sequence-region PYKI01003069.1 1 520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003069.1 Genbank region 1 520 . + . ID=PYKI01003069.1:1..520;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003069.1 Genbank gene 1 520 . + . ID=gene-C9F07_30750;Name=C9F07_30750;end_range=520,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30750;partial=true;start_range=.,1 PYKI01003069.1 Protein Homology CDS 1 520 . + 2 ID=cds-TGD40458.1;Parent=gene-C9F07_30750;Dbxref=NCBI_GP:TGD40458.1;Name=TGD40458.1;end_range=520,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=C9F07_30750;partial=true;product=murein DD-endopeptidase MepM;protein_id=TGD40458.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000345.1 1 519 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000345.1 Genbank region 1 519 . + . ID=PYKI01000345.1:1..519;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000345.1 Genbank gene 1 104 . + . ID=gene-C9F07_02550;Name=C9F07_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02550;partial=true;start_range=.,1 PYKI01000345.1 GeneMarkS+ CDS 1 104 . + 2 ID=cds-TGE26829.1;Parent=gene-C9F07_02550;Dbxref=NCBI_GP:TGE26829.1;Name=TGE26829.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F07_02550;partial=true;product=heme lyase NrfEFG subunit NrfF;protein_id=TGE26829.1;start_range=.,1;transl_table=11 PYKI01000345.1 Genbank pseudogene 101 475 . + . ID=gene-C9F07_02555;Name=C9F07_02555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02555;pseudo=true PYKI01000345.1 Protein Homology CDS 101 475 . + 0 ID=cds-C9F07_02555;Parent=gene-C9F07_02555;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=C9F07_02555;product=heme lysase NrfEFG subunit NrfG;pseudo=true;transl_table=11 ##sequence-region PYKI01000253.1 1 519 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000253.1 Genbank region 1 519 . + . ID=PYKI01000253.1:1..519;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000253.1 Genbank gene 1 170 . - . ID=gene-C9F07_01650;Name=C9F07_01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01650;partial=true;start_range=.,1 PYKI01000253.1 Protein Homology CDS 1 170 . - 0 ID=cds-TGE27855.1;Parent=gene-C9F07_01650;Dbxref=NCBI_GP:TGE27855.1;Name=TGE27855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=C9F07_01650;partial=true;product=DUF1869 domain-containing protein;protein_id=TGE27855.1;start_range=.,1;transl_table=11 PYKI01000253.1 Genbank gene 173 519 . - . ID=gene-C9F07_01655;Name=C9F07_01655;end_range=519,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01655;partial=true PYKI01000253.1 Protein Homology CDS 173 519 . - 2 ID=cds-TGE27856.1;Parent=gene-C9F07_01655;Dbxref=NCBI_GP:TGE27856.1;Name=TGE27856.1;end_range=519,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456240.1;locus_tag=C9F07_01655;partial=true;product=hypothetical protein;protein_id=TGE27856.1;transl_table=11 ##sequence-region PYKI01003492.1 1 519 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003492.1 Genbank region 1 519 . + . ID=PYKI01003492.1:1..519;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003492.1 Genbank gene 1 186 . + . ID=gene-C9F07_35125;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=C9F07_35125;partial=true;start_range=.,1 PYKI01003492.1 Protein Homology CDS 1 186 . + 0 ID=cds-TGD32188.1;Parent=gene-C9F07_35125;Dbxref=NCBI_GP:TGD32188.1;Name=TGD32188.1;Note=catalyzes the methylation of 16S rRNA at position G966;gbkey=CDS;gene=rsmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458349.1;locus_tag=C9F07_35125;partial=true;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=TGD32188.1;start_range=.,1;transl_table=11 PYKI01003492.1 Genbank gene 173 445 . + . ID=gene-C9F07_35130;Name=C9F07_35130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35130 PYKI01003492.1 Protein Homology CDS 173 445 . + 0 ID=cds-TGD32189.1;Parent=gene-C9F07_35130;Dbxref=NCBI_GP:TGD32189.1;Name=TGD32189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462474.3;locus_tag=C9F07_35130;product=hypothetical protein;protein_id=TGD32189.1;transl_table=11 ##sequence-region PYKI01001667.1 1 519 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001667.1 Genbank region 1 519 . + . ID=PYKI01001667.1:1..519;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001667.1 Genbank pseudogene 1 450 . - . ID=gene-C9F07_15920;Name=C9F07_15920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15920;pseudo=true PYKI01001667.1 Protein Homology CDS 1 450 . - 0 ID=cds-C9F07_15920;Parent=gene-C9F07_15920;Note=catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456205.1;locus_tag=C9F07_15920;product=succinylglutamate desuccinylase;pseudo=true;transl_table=11 ##sequence-region PYKI01002969.1 1 518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002969.1 Genbank region 1 518 . + . ID=PYKI01002969.1:1..518;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002969.1 Genbank pseudogene 88 518 . + . ID=gene-C9F07_29765;Name=C9F07_29765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29765;pseudo=true PYKI01002969.1 Protein Homology CDS 88 518 . + 0 ID=cds-C9F07_29765;Parent=gene-C9F07_29765;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=C9F07_29765;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002905.1 1 518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002905.1 Genbank region 1 518 . + . ID=PYKI01002905.1:1..518;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002905.1 Genbank gene 1 518 . - . ID=gene-C9F07_29105;Name=C9F07_29105;end_range=518,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29105;partial=true;start_range=.,1 PYKI01002905.1 Protein Homology CDS 1 518 . - 2 ID=cds-TGD43702.1;Parent=gene-C9F07_29105;Dbxref=NCBI_GP:TGD43702.1;Name=TGD43702.1;end_range=518,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454967.1;locus_tag=C9F07_29105;partial=true;product=porphobilinogen synthase;protein_id=TGD43702.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002455.1 1 518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002455.1 Genbank region 1 518 . + . ID=PYKI01002455.1:1..518;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002455.1 Genbank gene 80 518 . - . ID=gene-C9F07_24255;Name=C9F07_24255;end_range=518,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24255;partial=true PYKI01002455.1 Protein Homology CDS 80 518 . - 1 ID=cds-TGD50838.1;Parent=gene-C9F07_24255;Dbxref=NCBI_GP:TGD50838.1;Name=TGD50838.1;end_range=518,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=C9F07_24255;partial=true;product=hypothetical protein;protein_id=TGD50838.1;transl_table=11 ##sequence-region PYKI01001091.1 1 518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001091.1 Genbank region 1 518 . + . ID=PYKI01001091.1:1..518;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001091.1 Genbank pseudogene 19 518 . - . ID=gene-C9F07_10165;Name=treA;gbkey=Gene;gene=treA;gene_biotype=pseudogene;locus_tag=C9F07_10165;pseudo=true PYKI01001091.1 Protein Homology CDS 19 518 . - 2 ID=cds-C9F07_10165;Parent=gene-C9F07_10165;Note=periplasmic%3B catalyzes the hydrolysis of trehalose to glucose which can then be imported into the cell%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=treA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=C9F07_10165;product=alpha%2Calpha-trehalase;pseudo=true;transl_table=11 ##sequence-region PYKI01002736.1 1 518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002736.1 Genbank region 1 518 . + . ID=PYKI01002736.1:1..518;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002736.1 Genbank gene 1 518 . - . ID=gene-C9F07_27295;Name=C9F07_27295;end_range=518,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27295;partial=true;start_range=.,1 PYKI01002736.1 Protein Homology CDS 1 518 . - 1 ID=cds-TGD47250.1;Parent=gene-C9F07_27295;Dbxref=NCBI_GP:TGD47250.1;Name=TGD47250.1;end_range=518,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=C9F07_27295;partial=true;product=hypothetical protein;protein_id=TGD47250.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000699.1 1 3107 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000699.1 Genbank region 1 3107 . + . ID=PYKI01000699.1:1..3107;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000699.1 Genbank pseudogene 1 279 . + . ID=gene-C9F07_06120;Name=C9F07_06120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06120;pseudo=true PYKI01000699.1 Protein Homology CDS 1 279 . + 0 ID=cds-C9F07_06120;Parent=gene-C9F07_06120;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455282.1;locus_tag=C9F07_06120;product=glycosyl transferase;pseudo=true;transl_table=11 PYKI01000699.1 Genbank gene 337 2232 . + . ID=gene-C9F07_06125;Name=C9F07_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06125 PYKI01000699.1 Protein Homology CDS 337 2232 . + 0 ID=cds-TGE11320.1;Parent=gene-C9F07_06125;Dbxref=NCBI_GP:TGE11320.1;Name=TGE11320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459711.1;locus_tag=C9F07_06125;product=glycosyl transferase;protein_id=TGE11320.1;transl_table=11 PYKI01000699.1 Genbank gene 2300 2437 . + . ID=gene-C9F07_06130;Name=C9F07_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06130 PYKI01000699.1 Protein Homology CDS 2300 2437 . + 0 ID=cds-TGE11318.1;Parent=gene-C9F07_06130;Dbxref=NCBI_GP:TGE11318.1;Name=TGE11318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459712.1;locus_tag=C9F07_06130;product=hypothetical protein;protein_id=TGE11318.1;transl_table=11 PYKI01000699.1 Genbank gene 2486 3107 . + . ID=gene-C9F07_06135;Name=C9F07_06135;end_range=3107,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06135;partial=true PYKI01000699.1 Protein Homology CDS 2486 3107 . + 0 ID=cds-TGE11319.1;Parent=gene-C9F07_06135;Dbxref=NCBI_GP:TGE11319.1;Name=TGE11319.1;end_range=3107,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=C9F07_06135;partial=true;product=endonuclease VIII;protein_id=TGE11319.1;transl_table=11 ##sequence-region PYKI01001848.1 1 518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001848.1 Genbank region 1 518 . + . ID=PYKI01001848.1:1..518;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001848.1 Genbank gene 1 518 . + . ID=gene-C9F07_17770;Name=C9F07_17770;end_range=518,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17770;partial=true;start_range=.,1 PYKI01001848.1 Protein Homology CDS 1 518 . + 0 ID=cds-TGD63537.1;Parent=gene-C9F07_17770;Dbxref=NCBI_GP:TGD63537.1;Name=TGD63537.1;end_range=518,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=C9F07_17770;partial=true;product=hypothetical protein;protein_id=TGD63537.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002351.1 1 518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002351.1 Genbank region 1 518 . + . ID=PYKI01002351.1:1..518;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002351.1 Genbank gene 29 518 . - . ID=gene-C9F07_23090;Name=C9F07_23090;end_range=518,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23090;partial=true PYKI01002351.1 Protein Homology CDS 29 518 . - 1 ID=cds-TGD53294.1;Parent=gene-C9F07_23090;Dbxref=NCBI_GP:TGD53294.1;Name=TGD53294.1;Note=membrane protein conferring nickel and cobalt resistance;end_range=518,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=C9F07_23090;partial=true;product=nickel/cobalt efflux protein RcnA;protein_id=TGD53294.1;transl_table=11 ##sequence-region PYKI01003534.1 1 517 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003534.1 Genbank region 1 517 . + . ID=PYKI01003534.1:1..517;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003534.1 Genbank gene 1 517 . + . ID=gene-C9F07_35685;Name=C9F07_35685;end_range=517,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35685;partial=true;start_range=.,1 PYKI01003534.1 Protein Homology CDS 1 517 . + 1 ID=cds-TGD31205.1;Parent=gene-C9F07_35685;Dbxref=NCBI_GP:TGD31205.1;Name=TGD31205.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;end_range=517,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457598.1;locus_tag=C9F07_35685;partial=true;product=acyl-phosphate--glycerol-3-phosphate O-acyltransferase;protein_id=TGD31205.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000682.1 1 516 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000682.1 Genbank region 1 516 . + . ID=PYKI01000682.1:1..516;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000682.1 Genbank gene 1 516 . + . ID=gene-C9F07_05925;Name=C9F07_05925;end_range=516,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05925;partial=true;start_range=.,1 PYKI01000682.1 Protein Homology CDS 1 516 . + 1 ID=cds-TGE11521.1;Parent=gene-C9F07_05925;Dbxref=NCBI_GP:TGE11521.1;Name=TGE11521.1;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate;end_range=516,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457006.1;locus_tag=C9F07_05925;partial=true;product=NADP-dependent malic enzyme;protein_id=TGE11521.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001196.1 1 516 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001196.1 Genbank region 1 516 . + . ID=PYKI01001196.1:1..516;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001196.1 Genbank gene 1 516 . - . ID=gene-C9F07_11195;Name=C9F07_11195;end_range=516,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11195;partial=true;start_range=.,1 PYKI01001196.1 Protein Homology CDS 1 516 . - 1 ID=cds-TGD91766.1;Parent=gene-C9F07_11195;Dbxref=NCBI_GP:TGD91766.1;Name=TGD91766.1;end_range=516,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455480.1;locus_tag=C9F07_11195;partial=true;product=chromosome partition protein MukB;protein_id=TGD91766.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001640.1 1 515 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001640.1 Genbank region 1 515 . + . ID=PYKI01001640.1:1..515;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001640.1 Genbank gene 1 515 . - . ID=gene-C9F07_15680;Name=C9F07_15680;end_range=515,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15680;partial=true;start_range=.,1 PYKI01001640.1 Protein Homology CDS 1 515 . - 2 ID=cds-TGD70371.1;Parent=gene-C9F07_15680;Dbxref=NCBI_GP:TGD70371.1;Name=TGD70371.1;end_range=515,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456672.1;locus_tag=C9F07_15680;partial=true;product=multidrug transporter subunit MdtA;protein_id=TGD70371.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001774.1 1 515 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001774.1 Genbank region 1 515 . + . ID=PYKI01001774.1:1..515;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001774.1 Genbank gene 1 515 . - . ID=gene-C9F07_17040;Name=C9F07_17040;end_range=515,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17040;partial=true;start_range=.,1 PYKI01001774.1 Protein Homology CDS 1 515 . - 2 ID=cds-TGD66962.1;Parent=gene-C9F07_17040;Dbxref=NCBI_GP:TGD66962.1;Name=TGD66962.1;end_range=515,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=C9F07_17040;partial=true;product=EamA family transporter;protein_id=TGD66962.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003083.1 1 515 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003083.1 Genbank region 1 515 . + . ID=PYKI01003083.1:1..515;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003083.1 Genbank gene 1 248 . - . ID=gene-C9F07_30875;Name=C9F07_30875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30875;partial=true;start_range=.,1 PYKI01003083.1 Protein Homology CDS 1 248 . - 0 ID=cds-TGD40409.1;Parent=gene-C9F07_30875;Dbxref=NCBI_GP:TGD40409.1;Name=TGD40409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=C9F07_30875;partial=true;product=hypothetical protein;protein_id=TGD40409.1;start_range=.,1;transl_table=11 PYKI01003083.1 Genbank pseudogene 255 437 . - . ID=gene-C9F07_30880;Name=C9F07_30880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30880;pseudo=true PYKI01003083.1 Protein Homology CDS 255 437 . - 0 ID=cds-C9F07_30880;Parent=gene-C9F07_30880;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455788.1;locus_tag=C9F07_30880;product=DUF1049 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000486.1 1 514 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000486.1 Genbank region 1 514 . + . ID=PYKI01000486.1:1..514;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000486.1 Genbank gene 1 514 . + . ID=gene-C9F07_03915;Name=C9F07_03915;end_range=514,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03915;partial=true;start_range=.,1 PYKI01000486.1 Protein Homology CDS 1 514 . + 2 ID=cds-TGE18383.1;Parent=gene-C9F07_03915;Dbxref=NCBI_GP:TGE18383.1;Name=TGE18383.1;end_range=514,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456066.1;locus_tag=C9F07_03915;partial=true;product=hypothetical protein;protein_id=TGE18383.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000054.1 1 514 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000054.1 Genbank region 1 514 . + . ID=PYKI01000054.1:1..514;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000054.1 Genbank gene 1 137 . + . ID=gene-C9F07_00325;Name=C9F07_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00325;partial=true;start_range=.,1 PYKI01000054.1 Protein Homology CDS 1 137 . + 2 ID=cds-TGE30182.1;Parent=gene-C9F07_00325;Dbxref=NCBI_GP:TGE30182.1;Name=TGE30182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457725.1;locus_tag=C9F07_00325;partial=true;product=protease;protein_id=TGE30182.1;start_range=.,1;transl_table=11 PYKI01000054.1 Genbank pseudogene 230 478 . + . ID=gene-C9F07_00330;Name=C9F07_00330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00330;pseudo=true PYKI01000054.1 Protein Homology CDS 230 478 . + 0 ID=cds-C9F07_00330;Parent=gene-C9F07_00330;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457726.1;locus_tag=C9F07_00330;product=outer membrane-stress sensor serine endopeptidase DegS;pseudo=true;transl_table=11 ##sequence-region PYKI01003525.1 1 3097 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003525.1 Genbank region 1 3097 . + . ID=PYKI01003525.1:1..3097;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003525.1 Genbank gene 3 76 . - . ID=gene-C9F07_35575;Name=C9F07_35575;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_35575 PYKI01003525.1 tRNAscan-SE tRNA 3 76 . - . ID=rna-C9F07_35575;Parent=gene-C9F07_35575;anticodon=(pos:complement(40..42));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_35575;product=tRNA-Arg PYKI01003525.1 tRNAscan-SE exon 3 76 . - . ID=exon-C9F07_35575-1;Parent=rna-C9F07_35575;anticodon=(pos:complement(40..42));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_35575;product=tRNA-Arg PYKI01003525.1 Genbank gene 80 172 . - . ID=gene-C9F07_35580;Name=C9F07_35580;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_35580 PYKI01003525.1 tRNAscan-SE tRNA 80 172 . - . ID=rna-C9F07_35580;Parent=gene-C9F07_35580;anticodon=(pos:complement(136..138));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_35580;product=tRNA-Ser PYKI01003525.1 tRNAscan-SE exon 80 172 . - . ID=exon-C9F07_35580-1;Parent=rna-C9F07_35580;anticodon=(pos:complement(136..138));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_35580;product=tRNA-Ser PYKI01003525.1 Genbank gene 188 463 . + . ID=gene-C9F07_35585;Name=C9F07_35585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35585 PYKI01003525.1 Protein Homology CDS 188 463 . + 0 ID=cds-TGD31374.1;Parent=gene-C9F07_35585;Dbxref=NCBI_GP:TGD31374.1;Name=TGD31374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328872.1%2CRefSeq:WP_014344148.1;locus_tag=C9F07_35585;product=hypothetical protein;protein_id=TGD31374.1;transl_table=11 PYKI01003525.1 Genbank gene 476 661 . - . ID=gene-C9F07_35590;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=C9F07_35590 PYKI01003525.1 Protein Homology CDS 476 661 . - 0 ID=cds-TGD31375.1;Parent=gene-C9F07_35590;Dbxref=NCBI_GP:TGD31375.1;Name=TGD31375.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=C9F07_35590;product=carbon storage regulator;protein_id=TGD31375.1;transl_table=11 PYKI01003525.1 Genbank gene 896 3097 . - . ID=gene-C9F07_35595;Name=C9F07_35595;end_range=3097,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35595;partial=true PYKI01003525.1 Protein Homology CDS 896 3097 . - 0 ID=cds-TGD31376.1;Parent=gene-C9F07_35595;Dbxref=NCBI_GP:TGD31376.1;Name=TGD31376.1;end_range=3097,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=C9F07_35595;partial=true;product=alanine--tRNA ligase;protein_id=TGD31376.1;transl_table=11 ##sequence-region PYKI01002030.1 1 6268 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002030.1 Genbank region 1 6268 . + . ID=PYKI01002030.1:1..6268;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002030.1 Genbank gene 250 729 . + . ID=gene-C9F07_19595;Name=C9F07_19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19595 PYKI01002030.1 GeneMarkS+ CDS 250 729 . + 0 ID=cds-TGD60030.1;Parent=gene-C9F07_19595;Dbxref=NCBI_GP:TGD60030.1;Name=TGD60030.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F07_19595;product=hypothetical protein;protein_id=TGD60030.1;transl_table=11 PYKI01002030.1 Genbank pseudogene 860 1200 . - . ID=gene-C9F07_19600;Name=C9F07_19600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19600;pseudo=true PYKI01002030.1 Protein Homology CDS 860 1200 . - 0 ID=cds-C9F07_19600;Parent=gene-C9F07_19600;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013576221.1;locus_tag=C9F07_19600;product=IS110 family transposase;pseudo=true;transl_table=11 PYKI01002030.1 Genbank pseudogene 1357 2211 . + . ID=gene-C9F07_19605;Name=C9F07_19605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19605;pseudo=true PYKI01002030.1 Protein Homology CDS 1357 2211 . + 0 ID=cds-C9F07_19605;Parent=gene-C9F07_19605;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=C9F07_19605;product=transcriptional regulator;pseudo=true;transl_table=11 PYKI01002030.1 Genbank gene 2225 2689 . + . ID=gene-C9F07_19610;Name=C9F07_19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19610 PYKI01002030.1 Protein Homology CDS 2225 2689 . + 0 ID=cds-TGD60031.1;Parent=gene-C9F07_19610;Dbxref=NCBI_GP:TGD60031.1;Name=TGD60031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458173.1;locus_tag=C9F07_19610;product=hypothetical protein;protein_id=TGD60031.1;transl_table=11 PYKI01002030.1 Genbank gene 2784 5651 . - . ID=gene-C9F07_19615;Name=C9F07_19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19615 PYKI01002030.1 Protein Homology CDS 2784 5651 . - 0 ID=cds-TGD60032.1;Parent=gene-C9F07_19615;Dbxref=NCBI_GP:TGD60032.1;Name=TGD60032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=C9F07_19615;product=intestinal colonization autotransporter adhesin MisL;protein_id=TGD60032.1;transl_table=11 PYKI01002030.1 Genbank gene 5726 6268 . - . ID=gene-C9F07_19620;Name=C9F07_19620;end_range=6268,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19620;partial=true PYKI01002030.1 Protein Homology CDS 5726 6268 . - 0 ID=cds-TGD60033.1;Parent=gene-C9F07_19620;Dbxref=NCBI_GP:TGD60033.1;Name=TGD60033.1;end_range=6268,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458174.1;locus_tag=C9F07_19620;partial=true;product=transcriptional regulator;protein_id=TGD60033.1;transl_table=11 ##sequence-region PYKI01003160.1 1 513 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003160.1 Genbank region 1 513 . + . ID=PYKI01003160.1:1..513;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003160.1 Genbank gene 1 513 . - . ID=gene-C9F07_31690;Name=cydB;end_range=513,.;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=C9F07_31690;partial=true;start_range=.,1 PYKI01003160.1 Protein Homology CDS 1 513 . - 0 ID=cds-TGD38155.1;Parent=gene-C9F07_31690;Dbxref=NCBI_GP:TGD38155.1;Name=TGD38155.1;end_range=513,.;gbkey=CDS;gene=cydB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456302.1;locus_tag=C9F07_31690;partial=true;product=cytochrome d ubiquinol oxidase subunit II;protein_id=TGD38155.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001102.1 1 513 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001102.1 Genbank region 1 513 . + . ID=PYKI01001102.1:1..513;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001102.1 Genbank gene 1 513 . + . ID=gene-C9F07_10290;Name=C9F07_10290;end_range=513,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10290;partial=true;start_range=.,1 PYKI01001102.1 Protein Homology CDS 1 513 . + 2 ID=cds-TGD95221.1;Parent=gene-C9F07_10290;Dbxref=NCBI_GP:TGD95221.1;Name=TGD95221.1;end_range=513,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=C9F07_10290;partial=true;product=tricarboxylic transporter;protein_id=TGD95221.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002369.1 1 513 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002369.1 Genbank region 1 513 . + . ID=PYKI01002369.1:1..513;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002369.1 Genbank gene 1 513 . - . ID=gene-C9F07_23300;Name=entF;end_range=513,.;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=C9F07_23300;partial=true;start_range=.,1 PYKI01002369.1 Protein Homology CDS 1 513 . - 0 ID=cds-TGD52757.1;Parent=gene-C9F07_23300;Dbxref=NCBI_GP:TGD52757.1;Name=TGD52757.1;Note=with EntB%2C EntD%2C and EntE forms the multienzyme complex enterobactin synthase%3B EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin;end_range=513,.;gbkey=CDS;gene=entF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=C9F07_23300;partial=true;product=non-ribosomal peptide synthetase;protein_id=TGD52757.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002845.1 1 512 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002845.1 Genbank region 1 512 . + . ID=PYKI01002845.1:1..512;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002845.1 Genbank gene 1 228 . - . ID=gene-C9F07_28445;Name=C9F07_28445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28445;partial=true;start_range=.,1 PYKI01002845.1 Protein Homology CDS 1 228 . - 0 ID=cds-TGD45553.1;Parent=gene-C9F07_28445;Dbxref=NCBI_GP:TGD45553.1;Name=TGD45553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461627.1;locus_tag=C9F07_28445;partial=true;product=phage tail assembly protein;protein_id=TGD45553.1;start_range=.,1;transl_table=11 PYKI01002845.1 Genbank gene 283 512 . - . ID=gene-C9F07_28450;Name=C9F07_28450;end_range=512,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28450;partial=true PYKI01002845.1 Protein Homology CDS 283 512 . - 2 ID=cds-TGD45554.1;Parent=gene-C9F07_28450;Dbxref=NCBI_GP:TGD45554.1;Name=TGD45554.1;end_range=512,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461628.1;locus_tag=C9F07_28450;partial=true;product=phage tail protein;protein_id=TGD45554.1;transl_table=11 ##sequence-region PYKI01002168.1 1 512 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002168.1 Genbank region 1 512 . + . ID=PYKI01002168.1:1..512;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002168.1 Genbank gene 180 512 . + . ID=gene-C9F07_21080;Name=C9F07_21080;end_range=512,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21080;partial=true PYKI01002168.1 Protein Homology CDS 180 512 . + 0 ID=cds-TGD56991.1;Parent=gene-C9F07_21080;Dbxref=NCBI_GP:TGD56991.1;Name=TGD56991.1;Note=P-type%3B involved in magnesium transport into the cytoplasm;end_range=512,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458874.1;locus_tag=C9F07_21080;partial=true;product=magnesium-translocating P-type ATPase;protein_id=TGD56991.1;transl_table=11 ##sequence-region PYKI01001797.1 1 511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001797.1 Genbank region 1 511 . + . ID=PYKI01001797.1:1..511;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001797.1 Genbank gene 119 511 . - . ID=gene-C9F07_17300;Name=C9F07_17300;end_range=511,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17300;partial=true PYKI01001797.1 Protein Homology CDS 119 511 . - 0 ID=cds-TGD66022.1;Parent=gene-C9F07_17300;Dbxref=NCBI_GP:TGD66022.1;Name=TGD66022.1;end_range=511,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=C9F07_17300;partial=true;product=hypothetical protein;protein_id=TGD66022.1;transl_table=11 ##sequence-region PYKI01001363.1 1 511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001363.1 Genbank region 1 511 . + . ID=PYKI01001363.1:1..511;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001363.1 Genbank gene 1 184 . - . ID=gene-C9F07_12805;Name=C9F07_12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12805;partial=true;start_range=.,1 PYKI01001363.1 Protein Homology CDS 1 184 . - 0 ID=cds-TGD84789.1;Parent=gene-C9F07_12805;Dbxref=NCBI_GP:TGD84789.1;Name=TGD84789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458432.1;locus_tag=C9F07_12805;partial=true;product=cell filamentation protein Fic;protein_id=TGD84789.1;start_range=.,1;transl_table=11 PYKI01001363.1 Genbank gene 174 341 . - . ID=gene-C9F07_12810;Name=C9F07_12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12810 PYKI01001363.1 Protein Homology CDS 174 341 . - 0 ID=cds-TGD84790.1;Parent=gene-C9F07_12810;Dbxref=NCBI_GP:TGD84790.1;Name=TGD84790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458431.1;locus_tag=C9F07_12810;product=DUF2559 domain-containing protein;protein_id=TGD84790.1;transl_table=11 ##sequence-region PYKI01002060.1 1 511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002060.1 Genbank region 1 511 . + . ID=PYKI01002060.1:1..511;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002060.1 Genbank gene 1 511 . + . ID=gene-C9F07_19960;Name=C9F07_19960;end_range=511,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19960;partial=true;start_range=.,1 PYKI01002060.1 Protein Homology CDS 1 511 . + 0 ID=cds-TGD59934.1;Parent=gene-C9F07_19960;Dbxref=NCBI_GP:TGD59934.1;Name=TGD59934.1;end_range=511,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462487.3;locus_tag=C9F07_19960;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGD59934.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001185.1 1 509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001185.1 Genbank region 1 509 . + . ID=PYKI01001185.1:1..509;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001185.1 Genbank gene 1 413 . + . ID=gene-C9F07_11095;Name=C9F07_11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11095;partial=true;start_range=.,1 PYKI01001185.1 Protein Homology CDS 1 413 . + 2 ID=cds-TGD92143.1;Parent=gene-C9F07_11095;Dbxref=NCBI_GP:TGD92143.1;Name=TGD92143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=C9F07_11095;partial=true;product=hypothetical protein;protein_id=TGD92143.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000775.1 1 3090 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000775.1 Genbank region 1 3090 . + . ID=PYKI01000775.1:1..3090;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000775.1 Genbank gene 1 551 . + . ID=gene-C9F07_06905;Name=C9F07_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06905;partial=true;start_range=.,1 PYKI01000775.1 Protein Homology CDS 1 551 . + 2 ID=cds-TGE09195.1;Parent=gene-C9F07_06905;Dbxref=NCBI_GP:TGE09195.1;Name=TGE09195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000021876.1;locus_tag=C9F07_06905;partial=true;product=phage tail protein;protein_id=TGE09195.1;start_range=.,1;transl_table=11 PYKI01000775.1 Genbank gene 933 1688 . - . ID=gene-C9F07_06910;Name=C9F07_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06910 PYKI01000775.1 Protein Homology CDS 933 1688 . - 0 ID=cds-TGE09196.1;Parent=gene-C9F07_06910;Dbxref=NCBI_GP:TGE09196.1;Name=TGE09196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001077897.1;locus_tag=C9F07_06910;product=replication protein;protein_id=TGE09196.1;transl_table=11 PYKI01000775.1 Genbank gene 2077 2898 . + . ID=gene-C9F07_06915;Name=C9F07_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06915 PYKI01000775.1 Protein Homology CDS 2077 2898 . + 0 ID=cds-TGE09197.1;Parent=gene-C9F07_06915;Dbxref=NCBI_GP:TGE09197.1;Name=TGE09197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025047.1;locus_tag=C9F07_06915;product=hypothetical protein;protein_id=TGE09197.1;transl_table=11 ##sequence-region PYKI01000804.1 1 509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000804.1 Genbank region 1 509 . + . ID=PYKI01000804.1:1..509;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000804.1 Genbank gene 1 509 . - . ID=gene-C9F07_07240;Name=C9F07_07240;end_range=509,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07240;partial=true;start_range=.,1 PYKI01000804.1 Protein Homology CDS 1 509 . - 1 ID=cds-TGE09132.1;Parent=gene-C9F07_07240;Dbxref=NCBI_GP:TGE09132.1;Name=TGE09132.1;end_range=509,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=C9F07_07240;partial=true;product=aspartate aminotransferase family protein;protein_id=TGE09132.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000180.1 1 508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000180.1 Genbank region 1 508 . + . ID=PYKI01000180.1:1..508;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000180.1 Genbank gene 43 508 . + . ID=gene-C9F07_01225;Name=C9F07_01225;end_range=508,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01225;partial=true PYKI01000180.1 Protein Homology CDS 43 508 . + 0 ID=cds-TGE30046.1;Parent=gene-C9F07_01225;Dbxref=NCBI_GP:TGE30046.1;Name=TGE30046.1;end_range=508,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001692029.1;locus_tag=C9F07_01225;partial=true;product=large repetitive protein;protein_id=TGE30046.1;transl_table=11 ##sequence-region PYKI01000490.1 1 508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000490.1 Genbank region 1 508 . + . ID=PYKI01000490.1:1..508;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000490.1 Genbank gene 1 508 . - . ID=gene-C9F07_03955;Name=C9F07_03955;end_range=508,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03955;partial=true;start_range=.,1 PYKI01000490.1 Protein Homology CDS 1 508 . - 1 ID=cds-TGE17864.1;Parent=gene-C9F07_03955;Dbxref=NCBI_GP:TGE17864.1;Name=TGE17864.1;end_range=508,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456091.1;locus_tag=C9F07_03955;partial=true;product=oxidoreductase;protein_id=TGE17864.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000241.1 1 508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000241.1 Genbank region 1 508 . + . ID=PYKI01000241.1:1..508;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000241.1 Genbank gene 1 65 . - . ID=gene-C9F07_01575;Name=C9F07_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01575;partial=true;start_range=.,1 PYKI01000241.1 Protein Homology CDS 1 65 . - 0 ID=cds-TGE27865.1;Parent=gene-C9F07_01575;Dbxref=NCBI_GP:TGE27865.1;Name=TGE27865.1;Note=catalyzes the hydrolysis of acylphosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455581.1;locus_tag=C9F07_01575;partial=true;product=acylphosphatase;protein_id=TGE27865.1;start_range=.,1;transl_table=11 PYKI01000241.1 Genbank gene 114 508 . - . ID=gene-C9F07_01580;Name=C9F07_01580;end_range=508,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01580;partial=true PYKI01000241.1 Protein Homology CDS 114 508 . - 2 ID=cds-TGE27866.1;Parent=gene-C9F07_01580;Dbxref=NCBI_GP:TGE27866.1;Name=TGE27866.1;end_range=508,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=C9F07_01580;partial=true;product=AraC family transcriptional regulator;protein_id=TGE27866.1;transl_table=11 ##sequence-region PYKI01003271.1 1 507 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003271.1 Genbank region 1 507 . + . ID=PYKI01003271.1:1..507;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003271.1 Genbank gene 1 507 . + . ID=gene-C9F07_32920;Name=C9F07_32920;end_range=507,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32920;partial=true;start_range=.,1 PYKI01003271.1 Protein Homology CDS 1 507 . + 1 ID=cds-TGD36194.1;Parent=gene-C9F07_32920;Dbxref=NCBI_GP:TGD36194.1;Name=TGD36194.1;end_range=507,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=C9F07_32920;partial=true;product=FMN/FAD transporter;protein_id=TGD36194.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000438.1 1 507 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000438.1 Genbank region 1 507 . + . ID=PYKI01000438.1:1..507;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000438.1 Genbank pseudogene 1 507 . + . ID=gene-C9F07_03370;Name=C9F07_03370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03370;pseudo=true PYKI01000438.1 Protein Homology CDS 1 507 . + 0 ID=cds-C9F07_03370;Parent=gene-C9F07_03370;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=C9F07_03370;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001683.1 1 506 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001683.1 Genbank region 1 506 . + . ID=PYKI01001683.1:1..506;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001683.1 Genbank gene 1 126 . + . ID=gene-C9F07_16080;Name=C9F07_16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16080;partial=true;start_range=.,1 PYKI01001683.1 Protein Homology CDS 1 126 . + 0 ID=cds-TGD69735.1;Parent=gene-C9F07_16080;Dbxref=NCBI_GP:TGD69735.1;Name=TGD69735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=C9F07_16080;partial=true;product=hypothetical protein;protein_id=TGD69735.1;start_range=.,1;transl_table=11 PYKI01001683.1 Genbank gene 190 506 . + . ID=gene-C9F07_16085;Name=C9F07_16085;end_range=506,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16085;partial=true PYKI01001683.1 Protein Homology CDS 190 506 . + 0 ID=cds-TGD69736.1;Parent=gene-C9F07_16085;Dbxref=NCBI_GP:TGD69736.1;Name=TGD69736.1;end_range=506,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458521.1;locus_tag=C9F07_16085;partial=true;product=hypothetical protein;protein_id=TGD69736.1;transl_table=11 ##sequence-region PYKI01003255.1 1 506 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003255.1 Genbank region 1 506 . + . ID=PYKI01003255.1:1..506;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003255.1 Genbank gene 289 506 . + . ID=gene-C9F07_32745;Name=C9F07_32745;end_range=506,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32745;partial=true PYKI01003255.1 Protein Homology CDS 289 506 . + 0 ID=cds-TGD36303.1;Parent=gene-C9F07_32745;Dbxref=NCBI_GP:TGD36303.1;Name=TGD36303.1;end_range=506,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455050.1;locus_tag=C9F07_32745;partial=true;product=hypothetical protein;protein_id=TGD36303.1;transl_table=11 ##sequence-region PYKI01001947.1 1 505 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001947.1 Genbank region 1 505 . + . ID=PYKI01001947.1:1..505;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001947.1 Genbank gene 1 505 . - . ID=gene-C9F07_18760;Name=C9F07_18760;end_range=505,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18760;partial=true;start_range=.,1 PYKI01001947.1 Protein Homology CDS 1 505 . - 1 ID=cds-TGD60580.1;Parent=gene-C9F07_18760;Dbxref=NCBI_GP:TGD60580.1;Name=TGD60580.1;Note=Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides;end_range=505,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=C9F07_18760;partial=true;product=transcriptional regulator MalT;protein_id=TGD60580.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001565.1 1 505 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001565.1 Genbank region 1 505 . + . ID=PYKI01001565.1:1..505;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001565.1 Genbank gene 1 151 . - . ID=gene-C9F07_14990;Name=C9F07_14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14990;partial=true;start_range=.,1 PYKI01001565.1 Protein Homology CDS 1 151 . - 0 ID=cds-TGD73766.1;Parent=gene-C9F07_14990;Dbxref=NCBI_GP:TGD73766.1;Name=TGD73766.1;Note=catalyzes the of heptose(II) of the outer membrane lipopolysaccharide core;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=C9F07_14990;partial=true;product=histidine phosphatase family protein;protein_id=TGD73766.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003345.1 1 3089 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003345.1 Genbank region 1 3089 . + . ID=PYKI01003345.1:1..3089;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003345.1 Genbank pseudogene 127 1245 . - . ID=gene-C9F07_33660;Name=C9F07_33660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33660;pseudo=true PYKI01003345.1 Protein Homology CDS 127 1245 . - 0 ID=cds-C9F07_33660;Parent=gene-C9F07_33660;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=C9F07_33660;product=phosphoporin PhoE;pseudo=true;transl_table=11 PYKI01003345.1 Genbank gene 1962 2504 . + . ID=gene-C9F07_33665;Name=C9F07_33665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33665 PYKI01003345.1 Protein Homology CDS 1962 2504 . + 0 ID=cds-TGD35053.1;Parent=gene-C9F07_33665;Dbxref=NCBI_GP:TGD35053.1;Name=TGD35053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=C9F07_33665;product=DUF3225 domain-containing protein;protein_id=TGD35053.1;transl_table=11 PYKI01003345.1 Genbank pseudogene 2560 3024 . - . ID=gene-C9F07_33670;Name=C9F07_33670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33670;pseudo=true PYKI01003345.1 Protein Homology CDS 2560 3024 . - 0 ID=cds-C9F07_33670;Parent=gene-C9F07_33670;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455954.1;locus_tag=C9F07_33670;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000965.1 1 505 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000965.1 Genbank region 1 505 . + . ID=PYKI01000965.1:1..505;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000965.1 Genbank pseudogene 1 473 . + . ID=gene-C9F07_08815;Name=C9F07_08815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08815;pseudo=true PYKI01000965.1 Protein Homology CDS 1 473 . + 2 ID=cds-C9F07_08815;Parent=gene-C9F07_08815;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457045.1;locus_tag=C9F07_08815;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001290.1 1 504 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001290.1 Genbank region 1 504 . + . ID=PYKI01001290.1:1..504;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001290.1 Genbank pseudogene 159 464 . + . ID=gene-C9F07_12070;Name=C9F07_12070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12070;pseudo=true PYKI01001290.1 Protein Homology CDS 159 464 . + 0 ID=cds-C9F07_12070;Parent=gene-C9F07_12070;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280241.1;locus_tag=C9F07_12070;product=DUF91 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001339.1 1 504 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001339.1 Genbank region 1 504 . + . ID=PYKI01001339.1:1..504;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001339.1 Genbank gene 1 233 . + . ID=gene-C9F07_12490;Name=C9F07_12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12490;partial=true;start_range=.,1 PYKI01001339.1 Protein Homology CDS 1 233 . + 2 ID=cds-TGD85738.1;Parent=gene-C9F07_12490;Dbxref=NCBI_GP:TGD85738.1;Name=TGD85738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458112.1;locus_tag=C9F07_12490;partial=true;product=hypothetical protein;protein_id=TGD85738.1;start_range=.,1;transl_table=11 PYKI01001339.1 Genbank gene 230 504 . + . ID=gene-C9F07_12495;Name=C9F07_12495;end_range=504,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12495;partial=true PYKI01001339.1 Protein Homology CDS 230 504 . + 0 ID=cds-TGD85739.1;Parent=gene-C9F07_12495;Dbxref=NCBI_GP:TGD85739.1;Name=TGD85739.1;end_range=504,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458113.1;locus_tag=C9F07_12495;partial=true;product=hypothetical protein;protein_id=TGD85739.1;transl_table=11 ##sequence-region PYKI01000993.1 1 504 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000993.1 Genbank region 1 504 . + . ID=PYKI01000993.1:1..504;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000993.1 Genbank gene 1 272 . - . ID=gene-C9F07_09065;Name=C9F07_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09065;partial=true;start_range=.,1 PYKI01000993.1 Protein Homology CDS 1 272 . - 0 ID=cds-TGD99133.1;Parent=gene-C9F07_09065;Dbxref=NCBI_GP:TGD99133.1;Name=TGD99133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455143.1;locus_tag=C9F07_09065;partial=true;product=glycosyltransferase;protein_id=TGD99133.1;start_range=.,1;transl_table=11 PYKI01000993.1 Genbank pseudogene 269 487 . - . ID=gene-C9F07_09070;Name=C9F07_09070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09070;pseudo=true PYKI01000993.1 Protein Homology CDS 269 487 . - 0 ID=cds-C9F07_09070;Parent=gene-C9F07_09070;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455144.1;locus_tag=C9F07_09070;product=translocase;pseudo=true;transl_table=11 ##sequence-region PYKI01000334.1 1 503 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000334.1 Genbank region 1 503 . + . ID=PYKI01000334.1:1..503;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000334.1 Genbank pseudogene 1 485 . + . ID=gene-C9F07_02415;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=pseudogene;locus_tag=C9F07_02415;pseudo=true PYKI01000334.1 Protein Homology CDS 1 485 . + 2 ID=cds-C9F07_02415;Parent=gene-C9F07_02415;Note=catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=gltX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007722426.1;locus_tag=C9F07_02415;product=glutamate--tRNA ligase;pseudo=true;transl_table=11 ##sequence-region PYKI01002110.1 1 502 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002110.1 Genbank region 1 502 . + . ID=PYKI01002110.1:1..502;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002110.1 Genbank gene 1 502 . + . ID=gene-C9F07_20465;Name=feoB;end_range=502,.;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=C9F07_20465;partial=true;start_range=.,1 PYKI01002110.1 Protein Homology CDS 1 502 . + 0 ID=cds-TGD58340.1;Parent=gene-C9F07_20465;Dbxref=NCBI_GP:TGD58340.1;Name=TGD58340.1;Note=cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake;end_range=502,.;gbkey=CDS;gene=feoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458398.1;locus_tag=C9F07_20465;partial=true;product=ferrous iron transport protein B;protein_id=TGD58340.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002024.1 1 501 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002024.1 Genbank region 1 501 . + . ID=PYKI01002024.1:1..501;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002024.1 Genbank pseudogene 1 501 . - . ID=gene-C9F07_19535;Name=C9F07_19535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19535;pseudo=true PYKI01002024.1 Protein Homology CDS 1 501 . - 0 ID=cds-C9F07_19535;Parent=gene-C9F07_19535;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455662.1;locus_tag=C9F07_19535;product=virulence factor MviM;pseudo=true;transl_table=11 ##sequence-region PYKI01002807.1 1 500 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002807.1 Genbank region 1 500 . + . ID=PYKI01002807.1:1..500;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002807.1 Genbank gene 1 500 . - . ID=gene-C9F07_28130;Name=C9F07_28130;end_range=500,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28130;partial=true;start_range=.,1 PYKI01002807.1 Protein Homology CDS 1 500 . - 2 ID=cds-TGD45771.1;Parent=gene-C9F07_28130;Dbxref=NCBI_GP:TGD45771.1;Name=TGD45771.1;end_range=500,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454914.1;locus_tag=C9F07_28130;partial=true;product=fimbrial assembly protein;protein_id=TGD45771.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001233.1 1 499 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001233.1 Genbank region 1 499 . + . ID=PYKI01001233.1:1..499;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001233.1 Genbank gene 66 499 . + . ID=gene-C9F07_11525;Name=ompF;end_range=499,.;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=C9F07_11525;partial=true PYKI01001233.1 Protein Homology CDS 66 499 . + 0 ID=cds-TGD90980.1;Parent=gene-C9F07_11525;Dbxref=NCBI_GP:TGD90980.1;Name=TGD90980.1;end_range=499,.;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764169.1;locus_tag=C9F07_11525;partial=true;product=porin OmpF;protein_id=TGD90980.1;transl_table=11 ##sequence-region PYKI01001349.1 1 499 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001349.1 Genbank region 1 499 . + . ID=PYKI01001349.1:1..499;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001349.1 Genbank gene 1 195 . + . ID=gene-C9F07_12655;Name=C9F07_12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12655;partial=true;start_range=.,1 PYKI01001349.1 Protein Homology CDS 1 195 . + 0 ID=cds-TGD85249.1;Parent=gene-C9F07_12655;Dbxref=NCBI_GP:TGD85249.1;Name=TGD85249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455149.1;locus_tag=C9F07_12655;partial=true;product=hypothetical protein;protein_id=TGD85249.1;start_range=.,1;transl_table=11 PYKI01001349.1 Genbank gene 274 499 . - . ID=gene-C9F07_12660;Name=C9F07_12660;end_range=499,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12660;partial=true PYKI01001349.1 Protein Homology CDS 274 499 . - 1 ID=cds-TGD85248.1;Parent=gene-C9F07_12660;Dbxref=NCBI_GP:TGD85248.1;Name=TGD85248.1;end_range=499,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=C9F07_12660;partial=true;product=hypothetical protein;protein_id=TGD85248.1;transl_table=11 ##sequence-region PYKI01000780.1 1 3087 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000780.1 Genbank region 1 3087 . + . ID=PYKI01000780.1:1..3087;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000780.1 Genbank gene 1 381 . - . ID=gene-C9F07_07025;Name=C9F07_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07025;partial=true;start_range=.,1 PYKI01000780.1 Protein Homology CDS 1 381 . - 0 ID=cds-TGE09174.1;Parent=gene-C9F07_07025;Dbxref=NCBI_GP:TGE09174.1;Name=TGE09174.1;Note=in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA%3B cells lacking this function can grow%2C but are outcompeted by wild-type%3B SAM-dependent m(3)U1498 methyltransferase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457486.1;locus_tag=C9F07_07025;partial=true;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=TGE09174.1;start_range=.,1;transl_table=11 PYKI01000780.1 Genbank gene 458 1165 . - . ID=gene-C9F07_07030;Name=C9F07_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07030 PYKI01000780.1 Protein Homology CDS 458 1165 . - 0 ID=cds-TGE09172.1;Parent=gene-C9F07_07030;Dbxref=NCBI_GP:TGE09172.1;Name=TGE09172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457485.1;locus_tag=C9F07_07030;product=deoxyribonuclease I;protein_id=TGE09172.1;transl_table=11 PYKI01000780.1 Genbank gene 1260 1757 . - . ID=gene-C9F07_07035;Name=C9F07_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07035 PYKI01000780.1 Protein Homology CDS 1260 1757 . - 0 ID=cds-TGE09173.1;Parent=gene-C9F07_07035;Dbxref=NCBI_GP:TGE09173.1;Name=TGE09173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457484.1;locus_tag=C9F07_07035;product=SprT family protein;protein_id=TGE09173.1;transl_table=11 PYKI01000780.1 Genbank pseudogene 1836 3059 . - . ID=gene-C9F07_07040;Name=C9F07_07040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07040;pseudo=true PYKI01000780.1 Protein Homology CDS 1836 3059 . - 0 ID=cds-C9F07_07040;Parent=gene-C9F07_07040;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457483.1;locus_tag=C9F07_07040;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01001100.1 1 498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001100.1 Genbank region 1 498 . + . ID=PYKI01001100.1:1..498;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001100.1 Genbank gene 1 498 . - . ID=gene-C9F07_10275;Name=C9F07_10275;end_range=498,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10275;partial=true;start_range=.,1 PYKI01001100.1 Protein Homology CDS 1 498 . - 0 ID=cds-TGD95226.1;Parent=gene-C9F07_10275;Dbxref=NCBI_GP:TGD95226.1;Name=TGD95226.1;end_range=498,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=C9F07_10275;partial=true;product=hypothetical protein;protein_id=TGD95226.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000482.1 1 498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000482.1 Genbank region 1 498 . + . ID=PYKI01000482.1:1..498;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000482.1 Genbank gene 1 287 . + . ID=gene-C9F07_03860;Name=C9F07_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03860;partial=true;start_range=.,1 PYKI01000482.1 Protein Homology CDS 1 287 . + 2 ID=cds-TGE18679.1;Parent=gene-C9F07_03860;Dbxref=NCBI_GP:TGE18679.1;Name=TGE18679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457655.1;locus_tag=C9F07_03860;partial=true;product=hypothetical protein;protein_id=TGE18679.1;start_range=.,1;transl_table=11 PYKI01000482.1 Genbank pseudogene 274 498 . - . ID=gene-C9F07_03865;Name=C9F07_03865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03865;pseudo=true PYKI01000482.1 Protein Homology CDS 274 498 . - 0 ID=cds-C9F07_03865;Parent=gene-C9F07_03865;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457656.1;locus_tag=C9F07_03865;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01000633.1 1 498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000633.1 Genbank region 1 498 . + . ID=PYKI01000633.1:1..498;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000633.1 Genbank gene 1 498 . - . ID=gene-C9F07_05465;Name=C9F07_05465;end_range=498,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05465;partial=true;start_range=.,1 PYKI01000633.1 Protein Homology CDS 1 498 . - 1 ID=cds-TGE13095.1;Parent=gene-C9F07_05465;Dbxref=NCBI_GP:TGE13095.1;Name=TGE13095.1;end_range=498,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454739.1;locus_tag=C9F07_05465;partial=true;product=cell division protein FtsW;protein_id=TGE13095.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001750.1 1 498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001750.1 Genbank region 1 498 . + . ID=PYKI01001750.1:1..498;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001750.1 Genbank pseudogene 1 432 . + . ID=gene-C9F07_16815;Name=C9F07_16815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16815;pseudo=true PYKI01001750.1 Protein Homology CDS 1 432 . + 0 ID=cds-C9F07_16815;Parent=gene-C9F07_16815;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460459.1;locus_tag=C9F07_16815;product=dimethyl sulfoxide reductase subunit A;pseudo=true;transl_table=11 ##sequence-region PYKI01002811.1 1 498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002811.1 Genbank region 1 498 . + . ID=PYKI01002811.1:1..498;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002811.1 Genbank gene 1 498 . - . ID=gene-C9F07_28160;Name=C9F07_28160;end_range=498,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28160;partial=true;start_range=.,1 PYKI01002811.1 Protein Homology CDS 1 498 . - 2 ID=cds-TGD45731.1;Parent=gene-C9F07_28160;Dbxref=NCBI_GP:TGD45731.1;Name=TGD45731.1;end_range=498,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457000.1;locus_tag=C9F07_28160;partial=true;product=phosphate acetyltransferase;protein_id=TGD45731.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002401.1 1 497 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002401.1 Genbank region 1 497 . + . ID=PYKI01002401.1:1..497;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002401.1 Genbank pseudogene 1 404 . - . ID=gene-C9F07_23650;Name=C9F07_23650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23650;pseudo=true PYKI01002401.1 Protein Homology CDS 1 404 . - 0 ID=cds-C9F07_23650;Parent=gene-C9F07_23650;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=C9F07_23650;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;transl_table=11 ##sequence-region PYKI01000028.1 1 497 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000028.1 Genbank region 1 497 . + . ID=PYKI01000028.1:1..497;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000028.1 Genbank gene 1 497 . - . ID=gene-C9F07_00165;Name=C9F07_00165;end_range=497,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00165;partial=true;start_range=.,1 PYKI01000028.1 Protein Homology CDS 1 497 . - 0 ID=cds-TGE30204.1;Parent=gene-C9F07_00165;Dbxref=NCBI_GP:TGE30204.1;Name=TGE30204.1;Note=lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates;end_range=497,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=C9F07_00165;partial=true;product=lysophospholipase;protein_id=TGE30204.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003172.1 1 496 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003172.1 Genbank region 1 496 . + . ID=PYKI01003172.1:1..496;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003172.1 Genbank gene 1 371 . + . ID=gene-C9F07_31835;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=C9F07_31835;partial=true;start_range=.,1 PYKI01003172.1 Protein Homology CDS 1 371 . + 2 ID=cds-TGD37836.1;Parent=gene-C9F07_31835;Dbxref=NCBI_GP:TGD37836.1;Name=TGD37836.1;Note=in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane;gbkey=CDS;gene=glpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121613.1;locus_tag=C9F07_31835;partial=true;product=glycerol-3-phosphate dehydrogenase;protein_id=TGD37836.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000025.1 1 495 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000025.1 Genbank region 1 495 . + . ID=PYKI01000025.1:1..495;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000025.1 Genbank pseudogene 6 488 . - . ID=gene-C9F07_00150;Name=C9F07_00150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00150;pseudo=true PYKI01000025.1 Protein Homology CDS 6 488 . - 0 ID=cds-C9F07_00150;Parent=gene-C9F07_00150;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=C9F07_00150;product=pyruvate kinase PykF;pseudo=true;transl_table=11 ##sequence-region PYKI01003259.1 1 3039 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003259.1 Genbank region 1 3039 . + . ID=PYKI01003259.1:1..3039;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003259.1 Genbank pseudogene 1 415 . + . ID=gene-C9F07_32765;Name=C9F07_32765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32765;pseudo=true PYKI01003259.1 Protein Homology CDS 1 415 . + 1 ID=cds-C9F07_32765;Parent=gene-C9F07_32765;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457714.1;locus_tag=C9F07_32765;product=YhcH/YjgK/YiaL family protein;pseudo=true;transl_table=11 PYKI01003259.1 Genbank pseudogene 497 1776 . - . ID=gene-C9F07_32770;Name=C9F07_32770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32770;pseudo=true PYKI01003259.1 Protein Homology CDS 497 1776 . - 0 ID=cds-C9F07_32770;Parent=gene-C9F07_32770;Note=Catalyzes the deamination of cytosine to uracil and ammonia%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457713.1;locus_tag=C9F07_32770;product=cytosine deaminase;pseudo=true;transl_table=11 PYKI01003259.1 Genbank gene 1763 2992 . - . ID=gene-C9F07_32775;Name=C9F07_32775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32775 PYKI01003259.1 Protein Homology CDS 1763 2992 . - 0 ID=cds-TGD36267.1;Parent=gene-C9F07_32775;Dbxref=NCBI_GP:TGD36267.1;Name=TGD36267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=C9F07_32775;product=cytosine permease;protein_id=TGD36267.1;transl_table=11 ##sequence-region PYKI01001727.1 1 493 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001727.1 Genbank region 1 493 . + . ID=PYKI01001727.1:1..493;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001727.1 Genbank gene 1 134 . + . ID=gene-C9F07_16495;Name=C9F07_16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16495;partial=true;start_range=.,1 PYKI01001727.1 Protein Homology CDS 1 134 . + 2 ID=cds-TGD68882.1;Parent=gene-C9F07_16495;Dbxref=NCBI_GP:TGD68882.1;Name=TGD68882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006633188.1;locus_tag=C9F07_16495;partial=true;product=patatin family protein;protein_id=TGD68882.1;start_range=.,1;transl_table=11 PYKI01001727.1 Genbank pseudogene 94 438 . + . ID=gene-C9F07_16500;Name=C9F07_16500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16500;pseudo=true PYKI01001727.1 Protein Homology CDS 94 438 . + 0 ID=cds-C9F07_16500;Parent=gene-C9F07_16500;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455747.1;locus_tag=C9F07_16500;product=two-component system response regulator RssB;pseudo=true;transl_table=11 ##sequence-region PYKI01002259.1 1 493 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002259.1 Genbank region 1 493 . + . ID=PYKI01002259.1:1..493;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002259.1 Genbank pseudogene 73 441 . - . ID=gene-C9F07_22110;Name=C9F07_22110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22110;pseudo=true PYKI01002259.1 Protein Homology CDS 73 441 . - 0 ID=cds-C9F07_22110;Parent=gene-C9F07_22110;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=C9F07_22110;product=molybdate ABC transporter permease subunit;pseudo=true;transl_table=11 ##sequence-region PYKI01001381.1 1 493 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001381.1 Genbank region 1 493 . + . ID=PYKI01001381.1:1..493;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001381.1 Genbank gene 1 493 . - . ID=gene-C9F07_12980;Name=C9F07_12980;end_range=493,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12980;partial=true;start_range=.,1 PYKI01001381.1 Protein Homology CDS 1 493 . - 0 ID=cds-TGD84469.1;Parent=gene-C9F07_12980;Dbxref=NCBI_GP:TGD84469.1;Name=TGD84469.1;end_range=493,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455093.1;locus_tag=C9F07_12980;partial=true;product=hypothetical protein;protein_id=TGD84469.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000179.1 1 493 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000179.1 Genbank region 1 493 . + . ID=PYKI01000179.1:1..493;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000179.1 Genbank gene 1 493 . + . ID=gene-C9F07_01220;Name=C9F07_01220;end_range=493,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01220;partial=true;start_range=.,1 PYKI01000179.1 Protein Homology CDS 1 493 . + 2 ID=cds-TGE30047.1;Parent=gene-C9F07_01220;Dbxref=NCBI_GP:TGE30047.1;Name=TGE30047.1;Note=Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB;end_range=493,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454704.1;locus_tag=C9F07_01220;partial=true;product=peptidylprolyl isomerase SurA;protein_id=TGE30047.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000763.1 1 492 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000763.1 Genbank region 1 492 . + . ID=PYKI01000763.1:1..492;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000763.1 Genbank pseudogene 1 465 . + . ID=gene-C9F07_06735;Name=C9F07_06735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06735;pseudo=true PYKI01000763.1 Protein Homology CDS 1 465 . + 0 ID=cds-C9F07_06735;Parent=gene-C9F07_06735;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=C9F07_06735;product=ATP-dependent endonuclease;pseudo=true;transl_table=11 ##sequence-region PYKI01001238.1 1 492 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001238.1 Genbank region 1 492 . + . ID=PYKI01001238.1:1..492;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001238.1 Genbank gene 1 492 . + . ID=gene-C9F07_11555;Name=C9F07_11555;end_range=492,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11555;partial=true;start_range=.,1 PYKI01001238.1 Protein Homology CDS 1 492 . + 2 ID=cds-TGD90932.1;Parent=gene-C9F07_11555;Dbxref=NCBI_GP:TGD90932.1;Name=TGD90932.1;end_range=492,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455915.1;locus_tag=C9F07_11555;partial=true;product=hypothetical protein;protein_id=TGD90932.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001579.1 1 492 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001579.1 Genbank region 1 492 . + . ID=PYKI01001579.1:1..492;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001579.1 Genbank pseudogene 1 464 . - . ID=gene-C9F07_15115;Name=C9F07_15115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15115;pseudo=true PYKI01001579.1 Protein Homology CDS 1 464 . - 0 ID=cds-C9F07_15115;Parent=gene-C9F07_15115;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=C9F07_15115;product=DUF1176 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000389.1 1 491 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000389.1 Genbank region 1 491 . + . ID=PYKI01000389.1:1..491;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000389.1 Genbank gene 1 491 . + . ID=gene-C9F07_02945;Name=C9F07_02945;end_range=491,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02945;partial=true;start_range=.,1 PYKI01000389.1 Protein Homology CDS 1 491 . + 0 ID=cds-TGE22782.1;Parent=gene-C9F07_02945;Dbxref=NCBI_GP:TGE22782.1;Name=TGE22782.1;end_range=491,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455968.1;locus_tag=C9F07_02945;partial=true;product=dipeptidyl carboxypeptidase II;protein_id=TGE22782.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002869.1 1 491 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002869.1 Genbank region 1 491 . + . ID=PYKI01002869.1:1..491;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002869.1 Genbank pseudogene 12 413 . + . ID=gene-C9F07_28740;Name=C9F07_28740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28740;pseudo=true PYKI01002869.1 Protein Homology CDS 12 413 . + 0 ID=cds-C9F07_28740;Parent=gene-C9F07_28740;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007866032.1;locus_tag=C9F07_28740;product=peptide chain release factor 3;pseudo=true;transl_table=11 ##sequence-region PYKI01001710.1 1 491 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001710.1 Genbank region 1 491 . + . ID=PYKI01001710.1:1..491;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001710.1 Genbank gene 1 491 . + . ID=gene-C9F07_16330;Name=C9F07_16330;end_range=491,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16330;partial=true;start_range=.,1 PYKI01001710.1 Protein Homology CDS 1 491 . + 1 ID=cds-TGD69115.1;Parent=gene-C9F07_16330;Dbxref=NCBI_GP:TGD69115.1;Name=TGD69115.1;Note=UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent;end_range=491,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=C9F07_16330;partial=true;product=deoxyribodipyrimidine photo-lyase;protein_id=TGD69115.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002714.1 1 3080 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002714.1 Genbank region 1 3080 . + . ID=PYKI01002714.1:1..3080;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002714.1 Genbank gene 408 2093 . - . ID=gene-C9F07_27065;Name=C9F07_27065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27065 PYKI01002714.1 Protein Homology CDS 408 2093 . - 0 ID=cds-TGD47855.1;Parent=gene-C9F07_27065;Dbxref=NCBI_GP:TGD47855.1;Name=TGD47855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=C9F07_27065;product=transporter;protein_id=TGD47855.1;transl_table=11 PYKI01002714.1 Genbank pseudogene 2238 2429 . - . ID=gene-C9F07_27070;Name=C9F07_27070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27070;pseudo=true PYKI01002714.1 Protein Homology CDS 2238 2429 . - 0 ID=cds-C9F07_27070;Parent=gene-C9F07_27070;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001337222.1;locus_tag=C9F07_27070;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002714.1 Genbank gene 2364 2741 . + . ID=gene-C9F07_27075;Name=C9F07_27075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27075 PYKI01002714.1 Protein Homology CDS 2364 2741 . + 0 ID=cds-TGD47856.1;Parent=gene-C9F07_27075;Dbxref=NCBI_GP:TGD47856.1;Name=TGD47856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=C9F07_27075;product=hypothetical protein;protein_id=TGD47856.1;transl_table=11 PYKI01002714.1 Genbank gene 2773 3036 . - . ID=gene-C9F07_27080;Name=C9F07_27080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27080 PYKI01002714.1 Protein Homology CDS 2773 3036 . - 0 ID=cds-TGD47857.1;Parent=gene-C9F07_27080;Dbxref=NCBI_GP:TGD47857.1;Name=TGD47857.1;Note=functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455399.1;locus_tag=C9F07_27080;product=glutaredoxin;protein_id=TGD47857.1;transl_table=11 ##sequence-region PYKI01001761.1 1 491 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001761.1 Genbank region 1 491 . + . ID=PYKI01001761.1:1..491;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001761.1 Genbank gene 1 416 . + . ID=gene-C9F07_16910;Name=C9F07_16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16910;partial=true;start_range=.,1 PYKI01001761.1 Protein Homology CDS 1 416 . + 2 ID=cds-TGD67996.1;Parent=gene-C9F07_16910;Dbxref=NCBI_GP:TGD67996.1;Name=TGD67996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458860.1;locus_tag=C9F07_16910;partial=true;product=hypothetical protein;protein_id=TGD67996.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000980.1 1 491 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000980.1 Genbank region 1 491 . + . ID=PYKI01000980.1:1..491;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000980.1 Genbank pseudogene 94 465 . + . ID=gene-C9F07_08930;Name=C9F07_08930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08930;pseudo=true PYKI01000980.1 Protein Homology CDS 94 465 . + 0 ID=cds-C9F07_08930;Parent=gene-C9F07_08930;Note=laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454781.1;locus_tag=C9F07_08930;product=multicopper oxidase;pseudo=true;transl_table=11 ##sequence-region PYKI01000656.1 1 490 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000656.1 Genbank region 1 490 . + . ID=PYKI01000656.1:1..490;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000656.1 Genbank pseudogene 231 437 . - . ID=gene-C9F07_05720;Name=C9F07_05720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05720;pseudo=true PYKI01000656.1 Protein Homology CDS 231 437 . - 0 ID=cds-C9F07_05720;Parent=gene-C9F07_05720;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454910.1;locus_tag=C9F07_05720;product=transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01001518.1 1 489 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001518.1 Genbank region 1 489 . + . ID=PYKI01001518.1:1..489;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001518.1 Genbank gene 372 489 . + . ID=gene-C9F07_14465;Name=C9F07_14465;end_range=489,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14465;partial=true PYKI01001518.1 Protein Homology CDS 372 489 . + 0 ID=cds-TGD76685.1;Parent=gene-C9F07_14465;Dbxref=NCBI_GP:TGD76685.1;Name=TGD76685.1;end_range=489,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458299.1;locus_tag=C9F07_14465;partial=true;product=hypothetical protein;protein_id=TGD76685.1;transl_table=11 ##sequence-region PYKI01003456.1 1 489 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003456.1 Genbank region 1 489 . + . ID=PYKI01003456.1:1..489;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003456.1 Genbank gene 184 489 . + . ID=gene-C9F07_34755;Name=C9F07_34755;end_range=489,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34755;partial=true PYKI01003456.1 Protein Homology CDS 184 489 . + 0 ID=cds-TGD33370.1;Parent=gene-C9F07_34755;Dbxref=NCBI_GP:TGD33370.1;Name=TGD33370.1;end_range=489,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455062.1;locus_tag=C9F07_34755;partial=true;product=acyl-CoA thioesterase II;protein_id=TGD33370.1;transl_table=11 ##sequence-region PYKI01001751.1 1 489 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001751.1 Genbank region 1 489 . + . ID=PYKI01001751.1:1..489;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001751.1 Genbank gene 1 489 . + . ID=gene-C9F07_16820;Name=C9F07_16820;end_range=489,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16820;partial=true;start_range=.,1 PYKI01001751.1 Protein Homology CDS 1 489 . + 0 ID=cds-TGD68153.1;Parent=gene-C9F07_16820;Dbxref=NCBI_GP:TGD68153.1;Name=TGD68153.1;end_range=489,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458955.1;locus_tag=C9F07_16820;partial=true;product=carbon starvation protein A;protein_id=TGD68153.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001588.1 1 488 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001588.1 Genbank region 1 488 . + . ID=PYKI01001588.1:1..488;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001588.1 Genbank gene 1 478 . - . ID=gene-C9F07_15180;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=C9F07_15180;partial=true;start_range=.,1 PYKI01001588.1 Protein Homology CDS 1 478 . - 0 ID=cds-TGD72330.1;Parent=gene-C9F07_15180;Dbxref=NCBI_GP:TGD72330.1;Name=TGD72330.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;gbkey=CDS;gene=pgi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458519.1;locus_tag=C9F07_15180;partial=true;product=glucose-6-phosphate isomerase;protein_id=TGD72330.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002535.1 1 487 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002535.1 Genbank region 1 487 . + . ID=PYKI01002535.1:1..487;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002535.1 Genbank gene 185 487 . - . ID=gene-C9F07_25145;Name=C9F07_25145;end_range=487,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25145;partial=true PYKI01002535.1 Protein Homology CDS 185 487 . - 0 ID=cds-TGD50019.1;Parent=gene-C9F07_25145;Dbxref=NCBI_GP:TGD50019.1;Name=TGD50019.1;end_range=487,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=C9F07_25145;partial=true;product=hypothetical protein;protein_id=TGD50019.1;transl_table=11 ##sequence-region PYKI01001562.1 1 486 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001562.1 Genbank region 1 486 . + . ID=PYKI01001562.1:1..486;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001562.1 Genbank gene 1 459 . - . ID=gene-C9F07_14960;Name=C9F07_14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14960;partial=true;start_range=.,1 PYKI01001562.1 Protein Homology CDS 1 459 . - 0 ID=cds-TGD73815.1;Parent=gene-C9F07_14960;Dbxref=NCBI_GP:TGD73815.1;Name=TGD73815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=C9F07_14960;partial=true;product=phosphonate ABC transporter permease;protein_id=TGD73815.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001158.1 1 3075 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001158.1 Genbank region 1 3075 . + . ID=PYKI01001158.1:1..3075;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001158.1 Genbank pseudogene 1 998 . + . ID=gene-C9F07_10820;Name=C9F07_10820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10820;pseudo=true PYKI01001158.1 Protein Homology CDS 1 998 . + 2 ID=cds-C9F07_10820;Parent=gene-C9F07_10820;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457503.1;locus_tag=C9F07_10820;product=A/G-specific adenine glycosylase;pseudo=true;transl_table=11 PYKI01001158.1 Genbank gene 1026 1313 . + . ID=gene-C9F07_10825;Name=C9F07_10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10825 PYKI01001158.1 Protein Homology CDS 1026 1313 . + 0 ID=cds-TGD93572.1;Parent=gene-C9F07_10825;Dbxref=NCBI_GP:TGD93572.1;Name=TGD93572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457504.1;locus_tag=C9F07_10825;product=oxidative damage protection protein;protein_id=TGD93572.1;transl_table=11 PYKI01001158.1 Genbank gene 1417 2499 . + . ID=gene-C9F07_10830;Name=C9F07_10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10830 PYKI01001158.1 Protein Homology CDS 1417 2499 . + 0 ID=cds-TGD93573.1;Parent=gene-C9F07_10830;Dbxref=NCBI_GP:TGD93573.1;Name=TGD93573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417438.2;locus_tag=C9F07_10830;product=membrane-bound lytic murein transglycosylase MltC;protein_id=TGD93573.1;transl_table=11 PYKI01001158.1 Genbank gene 2716 3075 . + . ID=gene-C9F07_10835;Name=C9F07_10835;end_range=3075,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10835;partial=true PYKI01001158.1 Protein Homology CDS 2716 3075 . + 0 ID=cds-TGD93574.1;Parent=gene-C9F07_10835;Dbxref=NCBI_GP:TGD93574.1;Name=TGD93574.1;end_range=3075,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457506.1;locus_tag=C9F07_10835;partial=true;product=MFS transporter;protein_id=TGD93574.1;transl_table=11 ##sequence-region PYKI01000022.1 1 486 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000022.1 Genbank region 1 486 . + . ID=PYKI01000022.1:1..486;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000022.1 Genbank gene 183 259 . + . ID=gene-C9F07_00130;Name=C9F07_00130;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_00130 PYKI01000022.1 tRNAscan-SE tRNA 183 259 . + . ID=rna-C9F07_00130;Parent=gene-C9F07_00130;anticodon=(pos:217..219);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_00130;product=tRNA-Arg PYKI01000022.1 tRNAscan-SE exon 183 259 . + . ID=exon-C9F07_00130-1;Parent=rna-C9F07_00130;anticodon=(pos:217..219);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_00130;product=tRNA-Arg PYKI01000022.1 Genbank gene 314 389 . + . ID=gene-C9F07_00135;Name=C9F07_00135;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_00135 PYKI01000022.1 tRNAscan-SE tRNA 314 389 . + . ID=rna-C9F07_00135;Parent=gene-C9F07_00135;anticodon=(pos:347..349);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_00135;product=tRNA-His PYKI01000022.1 tRNAscan-SE exon 314 389 . + . ID=exon-C9F07_00135-1;Parent=rna-C9F07_00135;anticodon=(pos:347..349);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_00135;product=tRNA-His ##sequence-region PYKI01003000.1 1 485 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003000.1 Genbank region 1 485 . + . ID=PYKI01003000.1:1..485;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003000.1 Genbank gene 1 273 . + . ID=gene-C9F07_30085;Name=C9F07_30085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30085;partial=true;start_range=.,1 PYKI01003000.1 Protein Homology CDS 1 273 . + 0 ID=cds-TGD41253.1;Parent=gene-C9F07_30085;Dbxref=NCBI_GP:TGD41253.1;Name=TGD41253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417404.1;locus_tag=C9F07_30085;partial=true;product=transcriptional regulator;protein_id=TGD41253.1;start_range=.,1;transl_table=11 PYKI01003000.1 Genbank gene 270 485 . + . ID=gene-C9F07_30090;Name=C9F07_30090;end_range=485,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30090;partial=true PYKI01003000.1 Protein Homology CDS 270 485 . + 0 ID=cds-TGD41254.1;Parent=gene-C9F07_30090;Dbxref=NCBI_GP:TGD41254.1;Name=TGD41254.1;end_range=485,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016154380.1;locus_tag=C9F07_30090;partial=true;product=nucleoside/nucleotide kinase family protein;protein_id=TGD41254.1;transl_table=11 ##sequence-region PYKI01001206.1 1 485 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001206.1 Genbank region 1 485 . + . ID=PYKI01001206.1:1..485;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001206.1 Genbank gene 1 234 . - . ID=gene-C9F07_11300;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=sapG;locus_tag=C9F07_11300;partial=true;start_range=.,1 PYKI01001206.1 Protein Homology CDS 1 234 . - 0 ID=cds-TGD91502.1;Parent=gene-C9F07_11300;Dbxref=NCBI_GP:TGD91502.1;Name=TGD91502.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=C9F07_11300;partial=true;product=Trk system potassium transport protein TrkA;protein_id=TGD91502.1;start_range=.,1;transl_table=11 PYKI01001206.1 Genbank gene 256 485 . - . ID=gene-C9F07_11305;Name=C9F07_11305;end_range=485,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11305;partial=true PYKI01001206.1 Protein Homology CDS 256 485 . - 2 ID=cds-TGD91503.1;Parent=gene-C9F07_11305;Dbxref=NCBI_GP:TGD91503.1;Name=TGD91503.1;Note=catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase;end_range=485,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458491.1;locus_tag=C9F07_11305;partial=true;product=16S rRNA (cytosine(967)-C(5))-methyltransferase;protein_id=TGD91503.1;transl_table=11 ##sequence-region PYKI01001720.1 1 484 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001720.1 Genbank region 1 484 . + . ID=PYKI01001720.1:1..484;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001720.1 Genbank gene 300 484 . - . ID=gene-C9F07_16460;Name=C9F07_16460;end_range=484,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16460;partial=true PYKI01001720.1 Protein Homology CDS 300 484 . - 2 ID=cds-TGD68894.1;Parent=gene-C9F07_16460;Dbxref=NCBI_GP:TGD68894.1;Name=TGD68894.1;end_range=484,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000763887.1;locus_tag=C9F07_16460;partial=true;product=hypothetical protein;protein_id=TGD68894.1;transl_table=11 ##sequence-region PYKI01003321.1 1 484 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003321.1 Genbank region 1 484 . + . ID=PYKI01003321.1:1..484;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003321.1 Genbank gene 124 484 . + . ID=gene-C9F07_33405;Name=C9F07_33405;end_range=484,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33405;partial=true PYKI01003321.1 Protein Homology CDS 124 484 . + 0 ID=cds-TGD35949.1;Parent=gene-C9F07_33405;Dbxref=NCBI_GP:TGD35949.1;Name=TGD35949.1;end_range=484,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311341.1;locus_tag=C9F07_33405;partial=true;product=ethanolamine utilization protein EutH;protein_id=TGD35949.1;transl_table=11 ##sequence-region PYKI01002532.1 1 483 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002532.1 Genbank region 1 483 . + . ID=PYKI01002532.1:1..483;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002532.1 Genbank gene 1 392 . - . ID=gene-C9F07_25120;Name=C9F07_25120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25120;partial=true;start_range=.,1 PYKI01002532.1 Protein Homology CDS 1 392 . - 0 ID=cds-TGD50031.1;Parent=gene-C9F07_25120;Dbxref=NCBI_GP:TGD50031.1;Name=TGD50031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458860.1;locus_tag=C9F07_25120;partial=true;product=hypothetical protein;protein_id=TGD50031.1;start_range=.,1;transl_table=11 PYKI01002532.1 Genbank gene 415 483 . - . ID=gene-C9F07_25125;Name=C9F07_25125;end_range=483,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25125;partial=true PYKI01002532.1 Protein Homology CDS 415 483 . - 0 ID=cds-TGD50032.1;Parent=gene-C9F07_25125;Dbxref=NCBI_GP:TGD50032.1;Name=TGD50032.1;end_range=483,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=C9F07_25125;partial=true;product=cytoplasmic protein;protein_id=TGD50032.1;transl_table=11 ##sequence-region PYKI01000260.1 1 483 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000260.1 Genbank region 1 483 . + . ID=PYKI01000260.1:1..483;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000260.1 Genbank gene 376 483 . + . ID=gene-C9F07_01690;Name=C9F07_01690;end_range=483,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01690;partial=true PYKI01000260.1 Protein Homology CDS 376 483 . + 0 ID=cds-TGE27851.1;Parent=gene-C9F07_01690;Dbxref=NCBI_GP:TGE27851.1;Name=TGE27851.1;end_range=483,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004591103.1;locus_tag=C9F07_01690;partial=true;product=isoprenoid biosynthesis protein ElbB;protein_id=TGE27851.1;transl_table=11 ##sequence-region PYKI01003251.1 1 483 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003251.1 Genbank region 1 483 . + . ID=PYKI01003251.1:1..483;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003251.1 Genbank pseudogene 21 386 . + . ID=gene-C9F07_32720;Name=C9F07_32720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32720;pseudo=true PYKI01003251.1 Protein Homology CDS 21 386 . + 0 ID=cds-C9F07_32720;Parent=gene-C9F07_32720;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=C9F07_32720;product=peptide chain release factor N(5)-glutamine methyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01002040.1 1 482 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002040.1 Genbank region 1 482 . + . ID=PYKI01002040.1:1..482;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002040.1 Genbank gene 1 434 . - . ID=gene-C9F07_19720;Name=C9F07_19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19720;partial=true;start_range=.,1 PYKI01002040.1 Protein Homology CDS 1 434 . - 0 ID=cds-TGD59996.1;Parent=gene-C9F07_19720;Dbxref=NCBI_GP:TGD59996.1;Name=TGD59996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000118872.1;locus_tag=C9F07_19720;partial=true;product=hypothetical protein;protein_id=TGD59996.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000178.1 1 482 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000178.1 Genbank region 1 482 . + . ID=PYKI01000178.1:1..482;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000178.1 Genbank gene 1 482 . + . ID=gene-C9F07_01215;Name=gcvT;end_range=482,.;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=C9F07_01215;partial=true;start_range=.,1 PYKI01000178.1 Protein Homology CDS 1 482 . + 0 ID=cds-TGE30048.1;Parent=gene-C9F07_01215;Dbxref=NCBI_GP:TGE30048.1;Name=TGE30048.1;Note=catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein;end_range=482,.;gbkey=CDS;gene=gcvT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457453.1;locus_tag=C9F07_01215;partial=true;product=glycine cleavage system protein T;protein_id=TGE30048.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003306.1 1 482 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003306.1 Genbank region 1 482 . + . ID=PYKI01003306.1:1..482;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003306.1 Genbank gene 1 482 . - . ID=gene-C9F07_33255;Name=C9F07_33255;end_range=482,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33255;partial=true;start_range=.,1 PYKI01003306.1 Protein Homology CDS 1 482 . - 0 ID=cds-TGD36023.1;Parent=gene-C9F07_33255;Dbxref=NCBI_GP:TGD36023.1;Name=TGD36023.1;end_range=482,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=C9F07_33255;partial=true;product=flotillin;protein_id=TGD36023.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001915.1 1 482 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001915.1 Genbank region 1 482 . + . ID=PYKI01001915.1:1..482;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001915.1 Genbank gene 1 482 . + . ID=gene-C9F07_18435;Name=C9F07_18435;end_range=482,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18435;partial=true;start_range=.,1 PYKI01001915.1 Protein Homology CDS 1 482 . + 1 ID=cds-TGD61162.1;Parent=gene-C9F07_18435;Dbxref=NCBI_GP:TGD61162.1;Name=TGD61162.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;end_range=482,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=C9F07_18435;partial=true;product=potassium-transporting ATPase subunit B;protein_id=TGD61162.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003393.1 1 482 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003393.1 Genbank region 1 482 . + . ID=PYKI01003393.1:1..482;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003393.1 Genbank pseudogene 1 420 . + . ID=gene-C9F07_34130;Name=C9F07_34130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34130;pseudo=true PYKI01003393.1 Protein Homology CDS 1 420 . + 0 ID=cds-C9F07_34130;Parent=gene-C9F07_34130;Note=involved in the transport of nitrate and nitrite%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455920.1;locus_tag=C9F07_34130;product=nitrate/nitrite transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01000254.1 1 481 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000254.1 Genbank region 1 481 . + . ID=PYKI01000254.1:1..481;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000254.1 Genbank pseudogene 1 420 . - . ID=gene-C9F07_01660;Name=C9F07_01660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01660;pseudo=true PYKI01000254.1 Protein Homology CDS 1 420 . - 0 ID=cds-C9F07_01660;Parent=gene-C9F07_01660;Note=L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458250.1;locus_tag=C9F07_01660;product=xylulose 5-phosphate 3-epimerase;pseudo=true;transl_table=11 ##sequence-region PYKI01001453.1 1 481 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001453.1 Genbank region 1 481 . + . ID=PYKI01001453.1:1..481;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001453.1 Genbank pseudogene 1 430 . + . ID=gene-C9F07_13775;Name=C9F07_13775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13775;pseudo=true PYKI01001453.1 Protein Homology CDS 1 430 . + 1 ID=cds-C9F07_13775;Parent=gene-C9F07_13775;Note=involved in invasion of epithelial cells%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=C9F07_13775;product=intimin-like inverse autotransporter protein SinH;pseudo=true;transl_table=11 ##sequence-region PYKI01001748.1 1 481 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001748.1 Genbank region 1 481 . + . ID=PYKI01001748.1:1..481;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001748.1 Genbank gene 1 139 . - . ID=gene-C9F07_16790;Name=C9F07_16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16790;partial=true;start_range=.,1 PYKI01001748.1 Protein Homology CDS 1 139 . - 0 ID=cds-TGD68310.1;Parent=gene-C9F07_16790;Dbxref=NCBI_GP:TGD68310.1;Name=TGD68310.1;Note=Involved in the export of arginine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457464.1;locus_tag=C9F07_16790;partial=true;product=arginine transporter;protein_id=TGD68310.1;start_range=.,1;transl_table=11 PYKI01001748.1 Genbank gene 340 481 . - . ID=gene-C9F07_16795;Name=C9F07_16795;end_range=481,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16795;partial=true PYKI01001748.1 Protein Homology CDS 340 481 . - 1 ID=cds-TGD68309.1;Parent=gene-C9F07_16795;Dbxref=NCBI_GP:TGD68309.1;Name=TGD68309.1;Note=participates in the regulation of osmotic pressure changes within the cel;end_range=481,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457465.1;locus_tag=C9F07_16795;partial=true;product=mechanosensitive ion channel protein MscS;protein_id=TGD68309.1;transl_table=11 ##sequence-region PYKI01001692.1 1 481 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001692.1 Genbank region 1 481 . + . ID=PYKI01001692.1:1..481;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001692.1 Genbank gene 1 358 . - . ID=gene-C9F07_16145;Name=C9F07_16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16145;partial=true;start_range=.,1 PYKI01001692.1 Protein Homology CDS 1 358 . - 0 ID=cds-TGD69717.1;Parent=gene-C9F07_16145;Dbxref=NCBI_GP:TGD69717.1;Name=TGD69717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454749.1;locus_tag=C9F07_16145;partial=true;product=8-oxo-dGTP diphosphatase MutT;protein_id=TGD69717.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002146.1 1 480 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002146.1 Genbank region 1 480 . + . ID=PYKI01002146.1:1..480;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002146.1 Genbank gene 1 138 . - . ID=gene-C9F07_20845;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=C9F07_20845;partial=true;start_range=.,1 PYKI01002146.1 GeneMarkS+ CDS 1 138 . - 0 ID=cds-TGD57474.1;Parent=gene-C9F07_20845;Dbxref=NCBI_GP:TGD57474.1;Name=TGD57474.1;Note=catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP;gbkey=CDS;gene=cobU;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F07_20845;partial=true;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=TGD57474.1;start_range=.,1;transl_table=11 PYKI01002146.1 Genbank gene 135 480 . - . ID=gene-C9F07_20850;Name=C9F07_20850;end_range=480,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20850;partial=true PYKI01002146.1 Protein Homology CDS 135 480 . - 1 ID=cds-TGD57475.1;Parent=gene-C9F07_20850;Dbxref=NCBI_GP:TGD57475.1;Name=TGD57475.1;end_range=480,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456573.1;locus_tag=C9F07_20850;partial=true;product=cobyric acid synthase CobQ;protein_id=TGD57475.1;transl_table=11 ##sequence-region PYKI01000715.1 1 480 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000715.1 Genbank region 1 480 . + . ID=PYKI01000715.1:1..480;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000715.1 Genbank gene 1 165 . + . ID=gene-C9F07_06270;Name=C9F07_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06270;partial=true;start_range=.,1 PYKI01000715.1 Protein Homology CDS 1 165 . + 0 ID=cds-TGE11289.1;Parent=gene-C9F07_06270;Dbxref=NCBI_GP:TGE11289.1;Name=TGE11289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455446.1;locus_tag=C9F07_06270;partial=true;product=thioredoxin-disulfide reductase;protein_id=TGE11289.1;start_range=.,1;transl_table=11 PYKI01000715.1 Genbank gene 280 480 . + . ID=gene-C9F07_06275;Name=C9F07_06275;end_range=480,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06275;partial=true PYKI01000715.1 Protein Homology CDS 280 480 . + 0 ID=cds-TGE11290.1;Parent=gene-C9F07_06275;Dbxref=NCBI_GP:TGE11290.1;Name=TGE11290.1;end_range=480,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455445.1;locus_tag=C9F07_06275;partial=true;product=hypothetical protein;protein_id=TGE11290.1;transl_table=11 ##sequence-region PYKI01003151.1 1 480 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003151.1 Genbank region 1 480 . + . ID=PYKI01003151.1:1..480;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003151.1 Genbank pseudogene 1 392 . - . ID=gene-C9F07_31605;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=pseudogene;locus_tag=C9F07_31605;pseudo=true PYKI01003151.1 Protein Homology CDS 1 392 . - 0 ID=cds-C9F07_31605;Parent=gene-C9F07_31605;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=lgt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457396.1;locus_tag=C9F07_31605;product=prolipoprotein diacylglyceryl transferase;pseudo=true;transl_table=11 ##sequence-region PYKI01001352.1 1 3057 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001352.1 Genbank region 1 3057 . + . ID=PYKI01001352.1:1..3057;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001352.1 Genbank gene 1 1220 . + . ID=gene-C9F07_12685;Name=C9F07_12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12685;partial=true;start_range=.,1 PYKI01001352.1 Protein Homology CDS 1 1220 . + 2 ID=cds-TGD85099.1;Parent=gene-C9F07_12685;Dbxref=NCBI_GP:TGD85099.1;Name=TGD85099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=C9F07_12685;partial=true;product=Fis family transcriptional regulator;protein_id=TGD85099.1;start_range=.,1;transl_table=11 PYKI01001352.1 Genbank gene 1322 1744 . + . ID=gene-C9F07_12690;Name=C9F07_12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12690 PYKI01001352.1 Protein Homology CDS 1322 1744 . + 0 ID=cds-TGD85100.1;Parent=gene-C9F07_12690;Dbxref=NCBI_GP:TGD85100.1;Name=TGD85100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=C9F07_12690;product=PTS sugar transporter;protein_id=TGD85100.1;transl_table=11 PYKI01001352.1 Genbank gene 1759 2220 . + . ID=gene-C9F07_12695;Name=C9F07_12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12695 PYKI01001352.1 Protein Homology CDS 1759 2220 . + 0 ID=cds-TGD85101.1;Parent=gene-C9F07_12695;Dbxref=NCBI_GP:TGD85101.1;Name=TGD85101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=C9F07_12695;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=TGD85101.1;transl_table=11 PYKI01001352.1 Genbank gene 2246 3025 . + . ID=gene-C9F07_12700;Name=C9F07_12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12700 PYKI01001352.1 Protein Homology CDS 2246 3025 . + 0 ID=cds-TGD85102.1;Parent=gene-C9F07_12700;Dbxref=NCBI_GP:TGD85102.1;Name=TGD85102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=C9F07_12700;product=PTS sugar transporter;protein_id=TGD85102.1;transl_table=11 ##sequence-region PYKI01002495.1 1 479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002495.1 Genbank region 1 479 . + . ID=PYKI01002495.1:1..479;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002495.1 Genbank gene 1 479 . - . ID=gene-C9F07_24690;Name=C9F07_24690;end_range=479,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24690;partial=true;start_range=.,1 PYKI01002495.1 Protein Homology CDS 1 479 . - 0 ID=cds-TGD50335.1;Parent=gene-C9F07_24690;Dbxref=NCBI_GP:TGD50335.1;Name=TGD50335.1;Note=with GsiABD is involved in the transport of glutathione into the cell;end_range=479,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455385.1;locus_tag=C9F07_24690;partial=true;product=glutathione ABC transporter permease GsiD;protein_id=TGD50335.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003216.1 1 479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003216.1 Genbank region 1 479 . + . ID=PYKI01003216.1:1..479;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003216.1 Genbank gene 1 418 . + . ID=gene-C9F07_32370;Name=C9F07_32370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32370;partial=true;start_range=.,1 PYKI01003216.1 Protein Homology CDS 1 418 . + 1 ID=cds-TGD36851.1;Parent=gene-C9F07_32370;Dbxref=NCBI_GP:TGD36851.1;Name=TGD36851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455014.1;locus_tag=C9F07_32370;partial=true;product=phosphatidylglycerophosphatase A;protein_id=TGD36851.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000668.1 1 479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000668.1 Genbank region 1 479 . + . ID=PYKI01000668.1:1..479;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000668.1 Genbank gene 109 479 . + . ID=gene-C9F07_05825;Name=C9F07_05825;end_range=479,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05825;partial=true PYKI01000668.1 Protein Homology CDS 109 479 . + 0 ID=cds-TGE11888.1;Parent=gene-C9F07_05825;Dbxref=NCBI_GP:TGE11888.1;Name=TGE11888.1;end_range=479,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457745.1;locus_tag=C9F07_05825;partial=true;product=TIGR02099 family protein;protein_id=TGE11888.1;transl_table=11 ##sequence-region PYKI01002317.1 1 479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002317.1 Genbank region 1 479 . + . ID=PYKI01002317.1:1..479;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002317.1 Genbank gene 1 479 . - . ID=gene-C9F07_22720;Name=C9F07_22720;end_range=479,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22720;partial=true;start_range=.,1 PYKI01002317.1 Protein Homology CDS 1 479 . - 0 ID=cds-TGD54108.1;Parent=gene-C9F07_22720;Dbxref=NCBI_GP:TGD54108.1;Name=TGD54108.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;end_range=479,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001639862.1;locus_tag=C9F07_22720;partial=true;product=DNA topoisomerase IV subunit A;protein_id=TGD54108.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003146.1 1 479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003146.1 Genbank region 1 479 . + . ID=PYKI01003146.1:1..479;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003146.1 Genbank gene 1 304 . - . ID=gene-C9F07_31545;Name=C9F07_31545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31545;partial=true;start_range=.,1 PYKI01003146.1 Protein Homology CDS 1 304 . - 0 ID=cds-TGD38522.1;Parent=gene-C9F07_31545;Dbxref=NCBI_GP:TGD38522.1;Name=TGD38522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460827.1;locus_tag=C9F07_31545;partial=true;product=exodeoxyribonuclease 8;protein_id=TGD38522.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001080.1 1 479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001080.1 Genbank region 1 479 . + . ID=PYKI01001080.1:1..479;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001080.1 Genbank gene 41 181 . + . ID=gene-C9F07_10030;Name=C9F07_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10030 PYKI01001080.1 Protein Homology CDS 41 181 . + 0 ID=cds-TGD95736.1;Parent=gene-C9F07_10030;Dbxref=NCBI_GP:TGD95736.1;Name=TGD95736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001566325.1;locus_tag=C9F07_10030;product=glutamyl-tRNA synthetase;protein_id=TGD95736.1;transl_table=11 PYKI01001080.1 Genbank gene 235 479 . - . ID=gene-C9F07_10035;Name=C9F07_10035;end_range=479,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10035;partial=true PYKI01001080.1 Protein Homology CDS 235 479 . - 2 ID=cds-TGD95735.1;Parent=gene-C9F07_10035;Dbxref=NCBI_GP:TGD95735.1;Name=TGD95735.1;end_range=479,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=C9F07_10035;partial=true;product=hypothetical protein;protein_id=TGD95735.1;transl_table=11 ##sequence-region PYKI01001359.1 1 479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001359.1 Genbank region 1 479 . + . ID=PYKI01001359.1:1..479;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001359.1 Genbank gene 1 479 . - . ID=gene-C9F07_12765;Name=C9F07_12765;end_range=479,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12765;partial=true;start_range=.,1 PYKI01001359.1 Protein Homology CDS 1 479 . - 1 ID=cds-TGD85010.1;Parent=gene-C9F07_12765;Dbxref=NCBI_GP:TGD85010.1;Name=TGD85010.1;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;end_range=479,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=C9F07_12765;partial=true;product=NADH-quinone oxidoreductase subunit F;protein_id=TGD85010.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003370.1 1 479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003370.1 Genbank region 1 479 . + . ID=PYKI01003370.1:1..479;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003370.1 Genbank pseudogene 1 429 . + . ID=gene-C9F07_33955;Name=C9F07_33955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33955;pseudo=true PYKI01003370.1 Protein Homology CDS 1 429 . + 0 ID=cds-C9F07_33955;Parent=gene-C9F07_33955;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456939.1;locus_tag=C9F07_33955;product=histidine kinase;pseudo=true;transl_table=11 ##sequence-region PYKI01002632.1 1 479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002632.1 Genbank region 1 479 . + . ID=PYKI01002632.1:1..479;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002632.1 Genbank gene 1 123 . + . ID=gene-C9F07_26200;Name=C9F07_26200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26200;partial=true;start_range=.,1 PYKI01002632.1 Protein Homology CDS 1 123 . + 0 ID=cds-TGD49449.1;Parent=gene-C9F07_26200;Dbxref=NCBI_GP:TGD49449.1;Name=TGD49449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454973.1;locus_tag=C9F07_26200;partial=true;product=DUF2755 domain-containing protein;protein_id=TGD49449.1;start_range=.,1;transl_table=11 PYKI01002632.1 Genbank pseudogene 161 403 . - . ID=gene-C9F07_26205;Name=C9F07_26205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26205;pseudo=true PYKI01002632.1 Protein Homology CDS 161 403 . - 0 ID=cds-C9F07_26205;Parent=gene-C9F07_26205;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=C9F07_26205;product=DUF1615 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001329.1 1 479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001329.1 Genbank region 1 479 . + . ID=PYKI01001329.1:1..479;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001329.1 Genbank pseudogene 1 433 . + . ID=gene-C9F07_12430;Name=C9F07_12430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12430;pseudo=true PYKI01001329.1 Protein Homology CDS 1 433 . + 1 ID=cds-C9F07_12430;Parent=gene-C9F07_12430;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=C9F07_12430;product=peptide chain release factor N(5)-glutamine methyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01002490.1 1 3056 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002490.1 Genbank region 1 3056 . + . ID=PYKI01002490.1:1..3056;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002490.1 Genbank pseudogene 65 757 . + . ID=gene-C9F07_24630;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=pseudogene;locus_tag=C9F07_24630;pseudo=true PYKI01002490.1 Protein Homology CDS 65 757 . + 0 ID=cds-C9F07_24630;Parent=gene-C9F07_24630;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=hpaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455602.1;locus_tag=C9F07_24630;product=4-hydroxy-2-oxoheptanedioate aldolase;pseudo=true;transl_table=11 PYKI01002490.1 Genbank gene 830 2206 . + . ID=gene-C9F07_24635;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=C9F07_24635 PYKI01002490.1 Protein Homology CDS 830 2206 . + 0 ID=cds-TGD50381.1;Parent=gene-C9F07_24635;Dbxref=NCBI_GP:TGD50381.1;Name=TGD50381.1;gbkey=CDS;gene=hpaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=C9F07_24635;product=4-hydroxyphenylacetate permease;protein_id=TGD50381.1;transl_table=11 PYKI01002490.1 Genbank gene 2216 3056 . + . ID=gene-C9F07_24640;Name=hpaA;end_range=3056,.;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=C9F07_24640;partial=true PYKI01002490.1 Protein Homology CDS 2216 3056 . + 0 ID=cds-TGD50382.1;Parent=gene-C9F07_24640;Dbxref=NCBI_GP:TGD50382.1;Name=TGD50382.1;end_range=3056,.;gbkey=CDS;gene=hpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=C9F07_24640;partial=true;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=TGD50382.1;transl_table=11 ##sequence-region PYKI01002646.1 1 478 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002646.1 Genbank region 1 478 . + . ID=PYKI01002646.1:1..478;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002646.1 Genbank pseudogene 44 349 . + . ID=gene-C9F07_26355;Name=C9F07_26355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26355;pseudo=true PYKI01002646.1 Protein Homology CDS 44 349 . + 0 ID=cds-C9F07_26355;Parent=gene-C9F07_26355;Note=catalyzes the addition of the acetyl moity of acetyl-CoA to an N-hydroxy-arylamine to form an N-acetoxyarylamine%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455914.1;locus_tag=C9F07_26355;product=N-hydroxyarylamine O-acetyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01002607.1 1 478 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002607.1 Genbank region 1 478 . + . ID=PYKI01002607.1:1..478;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002607.1 Genbank gene 122 478 . + . ID=gene-C9F07_25880;Name=C9F07_25880;end_range=478,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25880;partial=true PYKI01002607.1 Protein Homology CDS 122 478 . + 0 ID=cds-TGD49585.1;Parent=gene-C9F07_25880;Dbxref=NCBI_GP:TGD49585.1;Name=TGD49585.1;end_range=478,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=C9F07_25880;partial=true;product=iron ABC transporter permease;protein_id=TGD49585.1;transl_table=11 ##sequence-region PYKI01000920.1 1 477 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000920.1 Genbank region 1 477 . + . ID=PYKI01000920.1:1..477;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000920.1 Genbank gene 1 477 . - . ID=gene-C9F07_08390;Name=C9F07_08390;end_range=477,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08390;partial=true;start_range=.,1 PYKI01000920.1 Protein Homology CDS 1 477 . - 1 ID=cds-TGE02904.1;Parent=gene-C9F07_08390;Dbxref=NCBI_GP:TGE02904.1;Name=TGE02904.1;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;end_range=477,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456986.1;locus_tag=C9F07_08390;partial=true;product=coproporphyrinogen III oxidase;protein_id=TGE02904.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002448.1 1 477 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002448.1 Genbank region 1 477 . + . ID=PYKI01002448.1:1..477;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002448.1 Genbank pseudogene 1 428 . + . ID=gene-C9F07_24200;Name=C9F07_24200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24200;pseudo=true PYKI01002448.1 Protein Homology CDS 1 428 . + 2 ID=cds-C9F07_24200;Parent=gene-C9F07_24200;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456727.1;locus_tag=C9F07_24200;product=D-lactate dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01003007.1 1 477 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003007.1 Genbank region 1 477 . + . ID=PYKI01003007.1:1..477;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003007.1 Genbank pseudogene 1 477 . - . ID=gene-C9F07_30135;Name=C9F07_30135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30135;pseudo=true PYKI01003007.1 Protein Homology CDS 1 477 . - 0 ID=cds-C9F07_30135;Parent=gene-C9F07_30135;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455075.1;locus_tag=C9F07_30135;product=mechanosensitive channel MscK;pseudo=true;transl_table=11 ##sequence-region PYKI01002290.1 1 476 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002290.1 Genbank region 1 476 . + . ID=PYKI01002290.1:1..476;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002290.1 Genbank pseudogene 1 411 . - . ID=gene-C9F07_22485;Name=C9F07_22485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22485;pseudo=true PYKI01002290.1 Protein Homology CDS 1 411 . - 0 ID=cds-C9F07_22485;Parent=gene-C9F07_22485;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461666.1;locus_tag=C9F07_22485;product=integrase;pseudo=true;transl_table=11 ##sequence-region PYKI01002955.1 1 476 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002955.1 Genbank region 1 476 . + . ID=PYKI01002955.1:1..476;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002955.1 Genbank pseudogene 1 476 . - . ID=gene-C9F07_29595;Name=C9F07_29595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29595;pseudo=true PYKI01002955.1 Protein Homology CDS 1 476 . - 0 ID=cds-C9F07_29595;Parent=gene-C9F07_29595;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=C9F07_29595;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000880.1 1 476 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000880.1 Genbank region 1 476 . + . ID=PYKI01000880.1:1..476;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01003460.1 1 476 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003460.1 Genbank region 1 476 . + . ID=PYKI01003460.1:1..476;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003460.1 Genbank gene 1 339 . + . ID=gene-C9F07_34785;Name=C9F07_34785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34785;partial=true;start_range=.,1 PYKI01003460.1 Protein Homology CDS 1 339 . + 0 ID=cds-TGD32936.1;Parent=gene-C9F07_34785;Dbxref=NCBI_GP:TGD32936.1;Name=TGD32936.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457567.1;locus_tag=C9F07_34785;partial=true;product=DNA topoisomerase IV subunit A;protein_id=TGD32936.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001458.1 1 475 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001458.1 Genbank region 1 475 . + . ID=PYKI01001458.1:1..475;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001458.1 Genbank gene 1 475 . + . ID=gene-C9F07_13845;Name=C9F07_13845;end_range=475,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13845;partial=true;start_range=.,1 PYKI01001458.1 Protein Homology CDS 1 475 . + 1 ID=cds-TGD82204.1;Parent=gene-C9F07_13845;Dbxref=NCBI_GP:TGD82204.1;Name=TGD82204.1;end_range=475,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455429.1;locus_tag=C9F07_13845;partial=true;product=ATP-dependent endonuclease;protein_id=TGD82204.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000781.1 1 3052 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000781.1 Genbank region 1 3052 . + . ID=PYKI01000781.1:1..3052;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000781.1 Genbank gene 1 118 . - . ID=gene-C9F07_07045;Name=C9F07_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07045;partial=true;start_range=.,1 PYKI01000781.1 Protein Homology CDS 1 118 . - 0 ID=cds-TGE09168.1;Parent=gene-C9F07_07045;Dbxref=NCBI_GP:TGE09168.1;Name=TGE09168.1;Note=rotamase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312227.1;locus_tag=C9F07_07045;partial=true;product=peptidylprolyl isomerase;protein_id=TGE09168.1;start_range=.,1;transl_table=11 PYKI01000781.1 Genbank gene 213 413 . - . ID=gene-C9F07_07050;Name=C9F07_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07050 PYKI01000781.1 Protein Homology CDS 213 413 . - 0 ID=cds-TGE09169.1;Parent=gene-C9F07_07050;Dbxref=NCBI_GP:TGE09169.1;Name=TGE09169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458444.1;locus_tag=C9F07_07050;product=hypothetical protein;protein_id=TGE09169.1;transl_table=11 PYKI01000781.1 Genbank gene 423 2228 . - . ID=gene-C9F07_07055;Name=C9F07_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07055 PYKI01000781.1 Protein Homology CDS 423 2228 . - 0 ID=cds-TGE09170.1;Parent=gene-C9F07_07055;Dbxref=NCBI_GP:TGE09170.1;Name=TGE09170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=C9F07_07055;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=TGE09170.1;transl_table=11 PYKI01000781.1 Genbank gene 2228 2779 . - . ID=gene-C9F07_07060;Name=C9F07_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07060 PYKI01000781.1 Protein Homology CDS 2228 2779 . - 0 ID=cds-TGE09171.1;Parent=gene-C9F07_07060;Dbxref=NCBI_GP:TGE09171.1;Name=TGE09171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458442.1;locus_tag=C9F07_07060;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=TGE09171.1;transl_table=11 ##sequence-region PYKI01001923.1 1 6207 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001923.1 Genbank region 1 6207 . + . ID=PYKI01001923.1:1..6207;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001923.1 Genbank gene 1 266 . + . ID=gene-C9F07_18520;Name=C9F07_18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18520;partial=true;start_range=.,1 PYKI01001923.1 Protein Homology CDS 1 266 . + 2 ID=cds-TGD60974.1;Parent=gene-C9F07_18520;Dbxref=NCBI_GP:TGD60974.1;Name=TGD60974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456754.1;locus_tag=C9F07_18520;partial=true;product=transcriptional regulator;protein_id=TGD60974.1;start_range=.,1;transl_table=11 PYKI01001923.1 Genbank gene 255 1112 . - . ID=gene-C9F07_18525;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=C9F07_18525 PYKI01001923.1 Protein Homology CDS 255 1112 . - 0 ID=cds-TGD60975.1;Parent=gene-C9F07_18525;Dbxref=NCBI_GP:TGD60975.1;Name=TGD60975.1;gbkey=CDS;gene=fghA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=C9F07_18525;product=S-formylglutathione hydrolase;protein_id=TGD60975.1;transl_table=11 PYKI01001923.1 Genbank gene 1040 1273 . - . ID=gene-C9F07_18530;Name=C9F07_18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18530 PYKI01001923.1 Protein Homology CDS 1040 1273 . - 0 ID=cds-TGD60976.1;Parent=gene-C9F07_18530;Dbxref=NCBI_GP:TGD60976.1;Name=TGD60976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012209975.1;locus_tag=C9F07_18530;product=hypothetical protein;protein_id=TGD60976.1;transl_table=11 PYKI01001923.1 Genbank gene 1442 2110 . + . ID=gene-C9F07_18535;Name=C9F07_18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18535 PYKI01001923.1 Protein Homology CDS 1442 2110 . + 0 ID=cds-TGD60977.1;Parent=gene-C9F07_18535;Dbxref=NCBI_GP:TGD60977.1;Name=TGD60977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456752.1;locus_tag=C9F07_18535;product=GTP cyclohydrolase I FolE;protein_id=TGD60977.1;transl_table=11 PYKI01001923.1 Genbank gene 2125 3267 . + . ID=gene-C9F07_18540;Name=C9F07_18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18540 PYKI01001923.1 Protein Homology CDS 2125 3267 . + 0 ID=cds-TGD60980.1;Parent=gene-C9F07_18540;Dbxref=NCBI_GP:TGD60980.1;Name=TGD60980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456751.1;locus_tag=C9F07_18540;product=hypothetical protein;protein_id=TGD60980.1;transl_table=11 PYKI01001923.1 Genbank gene 3417 4439 . + . ID=gene-C9F07_18545;Name=C9F07_18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18545 PYKI01001923.1 Protein Homology CDS 3417 4439 . + 0 ID=cds-TGD60978.1;Parent=gene-C9F07_18545;Dbxref=NCBI_GP:TGD60978.1;Name=TGD60978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=C9F07_18545;product=HTH-type transcriptional regulator GalS;protein_id=TGD60978.1;transl_table=11 PYKI01001923.1 Genbank pseudogene 4649 4877 . + . ID=gene-C9F07_18550;Name=C9F07_18550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18550;pseudo=true PYKI01001923.1 Protein Homology CDS 4649 4877 . + 0 ID=cds-C9F07_18550;Parent=gene-C9F07_18550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001148015.1;locus_tag=C9F07_18550;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001923.1 Genbank gene 4938 5936 . + . ID=gene-C9F07_18555;Name=C9F07_18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18555 PYKI01001923.1 Protein Homology CDS 4938 5936 . + 0 ID=cds-TGD60979.1;Parent=gene-C9F07_18555;Dbxref=NCBI_GP:TGD60979.1;Name=TGD60979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=C9F07_18555;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=TGD60979.1;transl_table=11 ##sequence-region PYKI01000840.1 1 474 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000840.1 Genbank region 1 474 . + . ID=PYKI01000840.1:1..474;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000840.1 Genbank gene 241 399 . + . ID=gene-C9F07_07665;Name=C9F07_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07665 PYKI01000840.1 Protein Homology CDS 241 399 . + 0 ID=cds-TGE07100.1;Parent=gene-C9F07_07665;Dbxref=NCBI_GP:TGE07100.1;Name=TGE07100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457194.1;locus_tag=C9F07_07665;product=YqaE/Pmp3 family membrane protein;protein_id=TGE07100.1;transl_table=11 ##sequence-region PYKI01000560.1 1 474 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000560.1 Genbank region 1 474 . + . ID=PYKI01000560.1:1..474;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000560.1 Genbank gene 1 474 . - . ID=gene-C9F07_04735;Name=C9F07_04735;end_range=474,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04735;partial=true;start_range=.,1 PYKI01000560.1 Protein Homology CDS 1 474 . - 1 ID=cds-TGE14863.1;Parent=gene-C9F07_04735;Dbxref=NCBI_GP:TGE14863.1;Name=TGE14863.1;end_range=474,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456654.1;locus_tag=C9F07_04735;partial=true;product=colanic acid biosynthesis glycosyltransferase WcaI;protein_id=TGE14863.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003023.1 1 430 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003023.1 Genbank region 1 430 . + . ID=PYKI01003023.1:1..430;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003023.1 Genbank gene 1 430 . - . ID=gene-C9F07_30335;Name=C9F07_30335;end_range=430,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30335;partial=true;start_range=.,1 PYKI01003023.1 Protein Homology CDS 1 430 . - 1 ID=cds-TGD41120.1;Parent=gene-C9F07_30335;Dbxref=NCBI_GP:TGD41120.1;Name=TGD41120.1;end_range=430,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=C9F07_30335;partial=true;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=TGD41120.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002824.1 1 472 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002824.1 Genbank region 1 472 . + . ID=PYKI01002824.1:1..472;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002824.1 Genbank pseudogene 18 440 . + . ID=gene-C9F07_28245;Name=C9F07_28245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28245;pseudo=true PYKI01002824.1 Protein Homology CDS 18 440 . + 0 ID=cds-C9F07_28245;Parent=gene-C9F07_28245;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455661.1;locus_tag=C9F07_28245;product=DUF480 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001888.1 1 472 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001888.1 Genbank region 1 472 . + . ID=PYKI01001888.1:1..472;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001888.1 Genbank gene 1 472 . - . ID=gene-C9F07_18230;Name=C9F07_18230;end_range=472,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18230;partial=true;start_range=.,1 PYKI01001888.1 Protein Homology CDS 1 472 . - 2 ID=cds-TGD61920.1;Parent=gene-C9F07_18230;Dbxref=NCBI_GP:TGD61920.1;Name=TGD61920.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;end_range=472,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455444.1;locus_tag=C9F07_18230;partial=true;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=TGD61920.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002175.1 1 472 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002175.1 Genbank region 1 472 . + . ID=PYKI01002175.1:1..472;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002175.1 Genbank pseudogene 46 228 . - . ID=gene-C9F07_21120;Name=C9F07_21120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21120;pseudo=true PYKI01002175.1 Protein Homology CDS 46 228 . - 0 ID=cds-C9F07_21120;Parent=gene-C9F07_21120;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455813.1;locus_tag=C9F07_21120;product=phage-shock protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002650.1 1 472 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002650.1 Genbank region 1 472 . + . ID=PYKI01002650.1:1..472;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002650.1 Genbank pseudogene 67 429 . - . ID=gene-C9F07_26395;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=pseudogene;gene_synonym=gutR;locus_tag=C9F07_26395;pseudo=true PYKI01002650.1 Protein Homology CDS 67 429 . - 0 ID=cds-C9F07_26395;Parent=gene-C9F07_26395;Note=regulates genes involved in glucitol utilization%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=srlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457231.1;locus_tag=C9F07_26395;product=transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01002150.1 1 471 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002150.1 Genbank region 1 471 . + . ID=PYKI01002150.1:1..471;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002150.1 Genbank gene 1 423 . - . ID=gene-C9F07_20890;Name=C9F07_20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20890;partial=true;start_range=.,1 PYKI01002150.1 Protein Homology CDS 1 423 . - 0 ID=cds-TGD57461.1;Parent=gene-C9F07_20890;Dbxref=NCBI_GP:TGD57461.1;Name=TGD57461.1;Note=catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate(PLP)-binding;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457408.1;locus_tag=C9F07_20890;partial=true;product=diaminopimelate decarboxylase;protein_id=TGD57461.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001596.1 1 471 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001596.1 Genbank region 1 471 . + . ID=PYKI01001596.1:1..471;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001596.1 Genbank gene 227 471 . - . ID=gene-C9F07_15245;Name=C9F07_15245;end_range=471,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15245;partial=true PYKI01001596.1 Protein Homology CDS 227 471 . - 2 ID=cds-TGD71666.1;Parent=gene-C9F07_15245;Dbxref=NCBI_GP:TGD71666.1;Name=TGD71666.1;end_range=471,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417814.1;locus_tag=C9F07_15245;partial=true;product=phosphoribulokinase;protein_id=TGD71666.1;transl_table=11 ##sequence-region PYKI01001291.1 1 471 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001291.1 Genbank region 1 471 . + . ID=PYKI01001291.1:1..471;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001291.1 Genbank gene 1 221 . + . ID=gene-C9F07_12075;Name=C9F07_12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12075;partial=true;start_range=.,1 PYKI01001291.1 Protein Homology CDS 1 221 . + 2 ID=cds-TGD87646.1;Parent=gene-C9F07_12075;Dbxref=NCBI_GP:TGD87646.1;Name=TGD87646.1;Note=catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=C9F07_12075;partial=true;product=cobalamin biosynthesis protein CbiG;protein_id=TGD87646.1;start_range=.,1;transl_table=11 PYKI01001291.1 Genbank pseudogene 221 471 . + . ID=gene-C9F07_12080;Name=cbiH;gbkey=Gene;gene=cbiH;gene_biotype=pseudogene;locus_tag=C9F07_12080;pseudo=true PYKI01001291.1 Protein Homology CDS 221 471 . + 0 ID=cds-C9F07_12080;Parent=gene-C9F07_12080;Note=catalyzes the formation of cobalt-precorrin-4 from cobalt-precorrin-3B%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;gene=cbiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456578.1;locus_tag=C9F07_12080;product=cobalt-precorrin-3B C(17)-methyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01002731.1 1 3050 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002731.1 Genbank region 1 3050 . + . ID=PYKI01002731.1:1..3050;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002731.1 Genbank gene 1 254 . - . ID=gene-C9F07_27250;Name=C9F07_27250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27250;partial=true;start_range=.,1 PYKI01002731.1 Protein Homology CDS 1 254 . - 0 ID=cds-TGD47399.1;Parent=gene-C9F07_27250;Dbxref=NCBI_GP:TGD47399.1;Name=TGD47399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=C9F07_27250;partial=true;product=MFS transporter;protein_id=TGD47399.1;start_range=.,1;transl_table=11 PYKI01002731.1 Genbank gene 431 1987 . - . ID=gene-C9F07_27255;Name=C9F07_27255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27255 PYKI01002731.1 Protein Homology CDS 431 1987 . - 0 ID=cds-TGD47400.1;Parent=gene-C9F07_27255;Dbxref=NCBI_GP:TGD47400.1;Name=TGD47400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455941.1;locus_tag=C9F07_27255;product=PhoPQ-regulated protein;protein_id=TGD47400.1;transl_table=11 PYKI01002731.1 Genbank gene 2057 3050 . - . ID=gene-C9F07_27260;Name=C9F07_27260;end_range=3050,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27260;partial=true PYKI01002731.1 Protein Homology CDS 2057 3050 . - 1 ID=cds-TGD47401.1;Parent=gene-C9F07_27260;Dbxref=NCBI_GP:TGD47401.1;Name=TGD47401.1;end_range=3050,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=C9F07_27260;partial=true;product=MFS transporter;protein_id=TGD47401.1;transl_table=11 ##sequence-region PYKI01003577.1 1 470 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003577.1 Genbank region 1 470 . + . ID=PYKI01003577.1:1..470;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003577.1 Genbank gene 1 470 . - . ID=gene-C9F07_36110;Name=C9F07_36110;end_range=470,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36110;partial=true;start_range=.,1 PYKI01003577.1 Protein Homology CDS 1 470 . - 0 ID=cds-TGD30143.1;Parent=gene-C9F07_36110;Dbxref=NCBI_GP:TGD30143.1;Name=TGD30143.1;end_range=470,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458865.1;locus_tag=C9F07_36110;partial=true;product=transcription antiterminator BglG;protein_id=TGD30143.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001732.1 1 470 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001732.1 Genbank region 1 470 . + . ID=PYKI01001732.1:1..470;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001732.1 Genbank gene 1 209 . + . ID=gene-C9F07_16555;Name=C9F07_16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16555;partial=true;start_range=.,1 PYKI01001732.1 Protein Homology CDS 1 209 . + 2 ID=cds-TGD68683.1;Parent=gene-C9F07_16555;Dbxref=NCBI_GP:TGD68683.1;Name=TGD68683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=C9F07_16555;partial=true;product=MFS transporter;protein_id=TGD68683.1;start_range=.,1;transl_table=11 PYKI01001732.1 Genbank gene 273 470 . + . ID=gene-C9F07_16560;Name=C9F07_16560;end_range=470,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16560;partial=true PYKI01001732.1 Protein Homology CDS 273 470 . + 0 ID=cds-TGD68684.1;Parent=gene-C9F07_16560;Dbxref=NCBI_GP:TGD68684.1;Name=TGD68684.1;end_range=470,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455658.1;locus_tag=C9F07_16560;partial=true;product=glutaredoxin;protein_id=TGD68684.1;transl_table=11 ##sequence-region PYKI01000084.1 1 470 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000084.1 Genbank region 1 470 . + . ID=PYKI01000084.1:1..470;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000084.1 Genbank gene 1 246 . + . ID=gene-C9F07_00525;Name=C9F07_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00525;partial=true;start_range=.,1 PYKI01000084.1 Protein Homology CDS 1 246 . + 0 ID=cds-TGE30153.1;Parent=gene-C9F07_00525;Dbxref=NCBI_GP:TGE30153.1;Name=TGE30153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=C9F07_00525;partial=true;product=hypothetical protein;protein_id=TGE30153.1;start_range=.,1;transl_table=11 PYKI01000084.1 Genbank gene 221 470 . + . ID=gene-C9F07_00530;Name=ttrR;end_range=470,.;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=C9F07_00530;partial=true PYKI01000084.1 Protein Homology CDS 221 470 . + 0 ID=cds-TGE30154.1;Parent=gene-C9F07_00530;Dbxref=NCBI_GP:TGE30154.1;Name=TGE30154.1;end_range=470,.;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456141.1;locus_tag=C9F07_00530;partial=true;product=two-component system response regulator TtrR;protein_id=TGE30154.1;transl_table=11 ##sequence-region PYKI01002393.1 1 469 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002393.1 Genbank region 1 469 . + . ID=PYKI01002393.1:1..469;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002393.1 Genbank gene 1 469 . + . ID=gene-C9F07_23560;Name=C9F07_23560;end_range=469,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23560;partial=true;start_range=.,1 PYKI01002393.1 Protein Homology CDS 1 469 . + 2 ID=cds-TGD52091.1;Parent=gene-C9F07_23560;Dbxref=NCBI_GP:TGD52091.1;Name=TGD52091.1;end_range=469,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=C9F07_23560;partial=true;product=esterase;protein_id=TGD52091.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001459.1 1 469 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001459.1 Genbank region 1 469 . + . ID=PYKI01001459.1:1..469;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001459.1 Genbank gene 1 292 . - . ID=gene-C9F07_13850;Name=C9F07_13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13850;partial=true;start_range=.,1 PYKI01001459.1 Protein Homology CDS 1 292 . - 0 ID=cds-TGD82203.1;Parent=gene-C9F07_13850;Dbxref=NCBI_GP:TGD82203.1;Name=TGD82203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457190.1;locus_tag=C9F07_13850;partial=true;product=succinate-semialdehyde dehydrogenase (NADP(+));protein_id=TGD82203.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002125.1 1 468 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002125.1 Genbank region 1 468 . + . ID=PYKI01002125.1:1..468;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002125.1 Genbank pseudogene 1 371 . + . ID=gene-C9F07_20565;Name=C9F07_20565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20565;pseudo=true PYKI01002125.1 Protein Homology CDS 1 371 . + 2 ID=cds-C9F07_20565;Parent=gene-C9F07_20565;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459042.1;locus_tag=C9F07_20565;product=cytoplasmic protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002545.1 1 468 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002545.1 Genbank region 1 468 . + . ID=PYKI01002545.1:1..468;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002545.1 Genbank gene 1 468 . + . ID=gene-C9F07_25260;Name=C9F07_25260;end_range=468,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25260;partial=true;start_range=.,1 PYKI01002545.1 Protein Homology CDS 1 468 . + 2 ID=cds-TGD49957.1;Parent=gene-C9F07_25260;Dbxref=NCBI_GP:TGD49957.1;Name=TGD49957.1;end_range=468,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455228.1;locus_tag=C9F07_25260;partial=true;product=sigma-54-dependent transcriptional regulator;protein_id=TGD49957.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002498.1 1 467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002498.1 Genbank region 1 467 . + . ID=PYKI01002498.1:1..467;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002498.1 Genbank gene 1 467 . - . ID=gene-C9F07_24710;Name=pspF;end_range=467,.;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=C9F07_24710;partial=true;start_range=.,1 PYKI01002498.1 Protein Homology CDS 1 467 . - 2 ID=cds-TGD50304.1;Parent=gene-C9F07_24710;Dbxref=NCBI_GP:TGD50304.1;Name=TGD50304.1;Note=transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor;end_range=467,.;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=C9F07_24710;partial=true;product=phage shock protein operon transcriptional activator;protein_id=TGD50304.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001936.1 1 467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001936.1 Genbank region 1 467 . + . ID=PYKI01001936.1:1..467;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001936.1 Genbank gene 1 467 . + . ID=gene-C9F07_18675;Name=C9F07_18675;end_range=467,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18675;partial=true;start_range=.,1 PYKI01001936.1 Protein Homology CDS 1 467 . + 2 ID=cds-TGD60725.1;Parent=gene-C9F07_18675;Dbxref=NCBI_GP:TGD60725.1;Name=TGD60725.1;end_range=467,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456815.1;locus_tag=C9F07_18675;partial=true;product=two-component system sensor histidine kinase/response regulator;protein_id=TGD60725.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002460.1 1 467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002460.1 Genbank region 1 467 . + . ID=PYKI01002460.1:1..467;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01000285.1 1 3050 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000285.1 Genbank region 1 3050 . + . ID=PYKI01000285.1:1..3050;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000285.1 Genbank gene 1 691 . + . ID=gene-C9F07_01845;Name=C9F07_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01845;partial=true;start_range=.,1 PYKI01000285.1 Protein Homology CDS 1 691 . + 1 ID=cds-TGE27824.1;Parent=gene-C9F07_01845;Dbxref=NCBI_GP:TGE27824.1;Name=TGE27824.1;Note=enterobacterial common antigen polymerase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=C9F07_01845;partial=true;product=O-antigen assembly polymerase;protein_id=TGE27824.1;start_range=.,1;transl_table=11 PYKI01000285.1 Genbank gene 688 1428 . + . ID=gene-C9F07_01850;Name=C9F07_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01850 PYKI01000285.1 Protein Homology CDS 688 1428 . + 0 ID=cds-TGE27822.1;Parent=gene-C9F07_01850;Dbxref=NCBI_GP:TGE27822.1;Name=TGE27822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457818.1;locus_tag=C9F07_01850;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=TGE27822.1;transl_table=11 PYKI01000285.1 Genbank gene 1635 2972 . + . ID=gene-C9F07_01855;Name=C9F07_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01855 PYKI01000285.1 Protein Homology CDS 1635 2972 . + 0 ID=cds-TGE27823.1;Parent=gene-C9F07_01855;Dbxref=NCBI_GP:TGE27823.1;Name=TGE27823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457817.1;locus_tag=C9F07_01855;product=amino acid permease;protein_id=TGE27823.1;transl_table=11 ##sequence-region PYKI01002557.1 1 466 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002557.1 Genbank region 1 466 . + . ID=PYKI01002557.1:1..466;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002557.1 Genbank pseudogene 33 466 . + . ID=gene-C9F07_25390;Name=C9F07_25390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25390;pseudo=true PYKI01002557.1 Protein Homology CDS 33 466 . + 0 ID=cds-C9F07_25390;Parent=gene-C9F07_25390;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=C9F07_25390;product=NAD-dependent malic enzyme;pseudo=true;transl_table=11 ##sequence-region PYKI01001662.1 1 465 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001662.1 Genbank region 1 465 . + . ID=PYKI01001662.1:1..465;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001662.1 Genbank gene 1 465 . + . ID=gene-C9F07_15875;Name=potA;end_range=465,.;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=C9F07_15875;partial=true;start_range=.,1 PYKI01001662.1 Protein Homology CDS 1 465 . + 0 ID=cds-TGD70161.1;Parent=gene-C9F07_15875;Dbxref=NCBI_GP:TGD70161.1;Name=TGD70161.1;Note=functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport%3B PotA is the membrane-associated ATPase;end_range=465,.;gbkey=CDS;gene=potA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=C9F07_15875;partial=true;product=putrescine/spermidine ABC transporter ATP-binding protein;protein_id=TGD70161.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000519.1 1 465 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000519.1 Genbank region 1 465 . + . ID=PYKI01000519.1:1..465;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000519.1 Genbank pseudogene 34 465 . - . ID=gene-C9F07_04310;Name=C9F07_04310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04310;pseudo=true PYKI01000519.1 Protein Homology CDS 34 465 . - 0 ID=cds-C9F07_04310;Parent=gene-C9F07_04310;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455618.1;locus_tag=C9F07_04310;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003247.1 1 464 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003247.1 Genbank region 1 464 . + . ID=PYKI01003247.1:1..464;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003247.1 Genbank pseudogene 67 464 . + . ID=gene-C9F07_32690;Name=C9F07_32690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32690;pseudo=true PYKI01003247.1 Protein Homology CDS 67 464 . + 0 ID=cds-C9F07_32690;Parent=gene-C9F07_32690;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=C9F07_32690;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002165.1 1 464 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002165.1 Genbank region 1 464 . + . ID=PYKI01002165.1:1..464;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002165.1 Genbank gene 1 464 . + . ID=gene-C9F07_21020;Name=wecC;end_range=464,.;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=C9F07_21020;partial=true;start_range=.,1 PYKI01002165.1 Protein Homology CDS 1 464 . + 1 ID=cds-TGD57219.1;Parent=gene-C9F07_21020;Dbxref=NCBI_GP:TGD57219.1;Name=TGD57219.1;Note=catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid;end_range=464,.;gbkey=CDS;gene=wecC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457826.1;locus_tag=C9F07_21020;partial=true;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=TGD57219.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003078.1 1 464 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003078.1 Genbank region 1 464 . + . ID=PYKI01003078.1:1..464;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003078.1 Genbank gene 144 464 . + . ID=gene-C9F07_30845;Name=C9F07_30845;end_range=464,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30845;partial=true PYKI01003078.1 Protein Homology CDS 144 464 . + 0 ID=cds-TGD40424.1;Parent=gene-C9F07_30845;Dbxref=NCBI_GP:TGD40424.1;Name=TGD40424.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;end_range=464,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458882.1;locus_tag=C9F07_30845;partial=true;product=ornithine carbamoyltransferase subunit F;protein_id=TGD40424.1;transl_table=11 ##sequence-region PYKI01001577.1 1 464 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001577.1 Genbank region 1 464 . + . ID=PYKI01001577.1:1..464;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001577.1 Genbank gene 1 464 . + . ID=gene-C9F07_15105;Name=C9F07_15105;end_range=464,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15105;partial=true;start_range=.,1 PYKI01001577.1 Protein Homology CDS 1 464 . + 1 ID=cds-TGD72936.1;Parent=gene-C9F07_15105;Dbxref=NCBI_GP:TGD72936.1;Name=TGD72936.1;end_range=464,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456187.1;locus_tag=C9F07_15105;partial=true;product=hypothetical protein;protein_id=TGD72936.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003334.1 1 463 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003334.1 Genbank region 1 463 . + . ID=PYKI01003334.1:1..463;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003334.1 Genbank gene 1 463 . + . ID=gene-C9F07_33550;Name=C9F07_33550;end_range=463,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33550;partial=true;start_range=.,1 PYKI01003334.1 Protein Homology CDS 1 463 . + 2 ID=cds-TGD35094.1;Parent=gene-C9F07_33550;Dbxref=NCBI_GP:TGD35094.1;Name=TGD35094.1;end_range=463,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=C9F07_33550;partial=true;product=autotransporter domain-containing esterase;protein_id=TGD35094.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002106.1 1 3050 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002106.1 Genbank region 1 3050 . + . ID=PYKI01002106.1:1..3050;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002106.1 Genbank gene 1 90 . + . ID=gene-C9F07_20440;Name=C9F07_20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20440;partial=true;start_range=.,1 PYKI01002106.1 Protein Homology CDS 1 90 . + 0 ID=cds-TGD58771.1;Parent=gene-C9F07_20440;Dbxref=NCBI_GP:TGD58771.1;Name=TGD58771.1;Note=mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=C9F07_20440;partial=true;product=leucine-responsive transcriptional regulator;protein_id=TGD58771.1;start_range=.,1;transl_table=11 PYKI01002106.1 Genbank gene 225 3050 . + . ID=gene-C9F07_20445;Name=C9F07_20445;end_range=3050,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20445;partial=true PYKI01002106.1 Protein Homology CDS 225 3050 . + 0 ID=cds-TGD58772.1;Parent=gene-C9F07_20445;Dbxref=NCBI_GP:TGD58772.1;Name=TGD58772.1;end_range=3050,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=C9F07_20445;partial=true;product=DNA translocase FtsK;protein_id=TGD58772.1;transl_table=11 ##sequence-region PYKI01000841.1 1 463 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000841.1 Genbank region 1 463 . + . ID=PYKI01000841.1:1..463;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000841.1 Genbank pseudogene 53 349 . - . ID=gene-C9F07_07670;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=pseudogene;locus_tag=C9F07_07670;pseudo=true PYKI01000841.1 Protein Homology CDS 53 349 . - 0 ID=cds-C9F07_07670;Parent=gene-C9F07_07670;Note=WcaM from Salmonella enterica is essential for biofilm formation on HEp-2 cells and chicken intestinal tissue but not on a plastic surface%3B may be involved in the biosynthesis of colanic acid%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=C9F07_07670;product=colanic acid biosynthesis protein WcaM;pseudo=true;transl_table=11 ##sequence-region PYKI01001723.1 1 462 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001723.1 Genbank region 1 462 . + . ID=PYKI01001723.1:1..462;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001723.1 Genbank gene 1 376 . + . ID=gene-C9F07_16475;Name=C9F07_16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16475;partial=true;start_range=.,1 PYKI01001723.1 Protein Homology CDS 1 376 . + 1 ID=cds-TGD68888.1;Parent=gene-C9F07_16475;Dbxref=NCBI_GP:TGD68888.1;Name=TGD68888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457053.1;locus_tag=C9F07_16475;partial=true;product=hypothetical protein;protein_id=TGD68888.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001603.1 1 462 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001603.1 Genbank region 1 462 . + . ID=PYKI01001603.1:1..462;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001603.1 Genbank pseudogene 107 172 . + . ID=gene-C9F07_15300;Name=C9F07_15300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15300;pseudo=true PYKI01001603.1 Protein Homology CDS 107 172 . + 0 ID=cds-C9F07_15300;Parent=gene-C9F07_15300;Note=Predicted role in electron transfer to the periplasmic nitrate reductase protein NapA.%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456806.1;locus_tag=C9F07_15300;product=ferredoxin-type protein NapF;pseudo=true;transl_table=11 PYKI01001603.1 Genbank gene 162 425 . + . ID=gene-C9F07_15305;Name=C9F07_15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15305 PYKI01001603.1 Protein Homology CDS 162 425 . + 0 ID=cds-TGD71256.1;Parent=gene-C9F07_15305;Dbxref=NCBI_GP:TGD71256.1;Name=TGD71256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456805.1;locus_tag=C9F07_15305;product=nitrate reductase;protein_id=TGD71256.1;transl_table=11 ##sequence-region PYKI01001137.1 1 462 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001137.1 Genbank region 1 462 . + . ID=PYKI01001137.1:1..462;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001137.1 Genbank gene 1 462 . - . ID=gene-C9F07_10600;Name=C9F07_10600;end_range=462,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10600;partial=true;start_range=.,1 PYKI01001137.1 Protein Homology CDS 1 462 . - 2 ID=cds-TGD94604.1;Parent=gene-C9F07_10600;Dbxref=NCBI_GP:TGD94604.1;Name=TGD94604.1;Note=with LptABCF is involved in the transport of lipopolysaccharides;end_range=462,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=C9F07_10600;partial=true;product=lipopolysaccharide ABC transporter permease LptG;protein_id=TGD94604.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000124.1 1 462 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000124.1 Genbank region 1 462 . + . ID=PYKI01000124.1:1..462;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000124.1 Genbank gene 1 462 . - . ID=gene-C9F07_00835;Name=rseP;end_range=462,.;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=C9F07_00835;partial=true;start_range=.,1 PYKI01000124.1 Protein Homology CDS 1 462 . - 1 ID=cds-TGE30103.1;Parent=gene-C9F07_00835;Dbxref=NCBI_GP:TGE30103.1;Name=TGE30103.1;end_range=462,.;gbkey=CDS;gene=rseP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=C9F07_00835;partial=true;product=RIP metalloprotease RseP;protein_id=TGE30103.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000566.1 1 461 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000566.1 Genbank region 1 461 . + . ID=PYKI01000566.1:1..461;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000566.1 Genbank gene 1 461 . + . ID=gene-C9F07_04795;Name=C9F07_04795;end_range=461,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04795;partial=true;start_range=.,1 PYKI01000566.1 Protein Homology CDS 1 461 . + 2 ID=cds-TGE14728.1;Parent=gene-C9F07_04795;Dbxref=NCBI_GP:TGE14728.1;Name=TGE14728.1;end_range=461,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441950.1;locus_tag=C9F07_04795;partial=true;product=Holliday junction branch migration DNA helicase RuvB;protein_id=TGE14728.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001327.1 1 460 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001327.1 Genbank region 1 460 . + . ID=PYKI01001327.1:1..460;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001327.1 Genbank gene 1 299 . + . ID=gene-C9F07_12415;Name=C9F07_12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12415;partial=true;start_range=.,1 PYKI01001327.1 Protein Homology CDS 1 299 . + 2 ID=cds-TGD86004.1;Parent=gene-C9F07_12415;Dbxref=NCBI_GP:TGD86004.1;Name=TGD86004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456729.1;locus_tag=C9F07_12415;partial=true;product=DedA family protein;protein_id=TGD86004.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002463.1 1 460 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002463.1 Genbank region 1 460 . + . ID=PYKI01002463.1:1..460;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002463.1 Genbank gene 1 460 . + . ID=gene-C9F07_24320;Name=bcsG;end_range=460,.;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=C9F07_24320;partial=true;start_range=.,1 PYKI01002463.1 Protein Homology CDS 1 460 . + 1 ID=cds-TGD50732.1;Parent=gene-C9F07_24320;Dbxref=NCBI_GP:TGD50732.1;Name=TGD50732.1;end_range=460,.;gbkey=CDS;gene=bcsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458296.1;locus_tag=C9F07_24320;partial=true;product=cellulose biosynthesis protein BcsG;protein_id=TGD50732.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000160.1 1 460 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000160.1 Genbank region 1 460 . + . ID=PYKI01000160.1:1..460;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000160.1 Genbank pseudogene 110 421 . - . ID=gene-C9F07_01095;Name=C9F07_01095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01095;pseudo=true PYKI01000160.1 Protein Homology CDS 110 421 . - 0 ID=cds-C9F07_01095;Parent=gene-C9F07_01095;Note=cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=C9F07_01095;product=cAMP-activated global transcriptional regulator CRP;pseudo=true;transl_table=11 ##sequence-region PYKI01000933.1 1 459 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000933.1 Genbank region 1 459 . + . ID=PYKI01000933.1:1..459;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000933.1 Genbank pseudogene 38 181 . - . ID=gene-C9F07_08515;Name=C9F07_08515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08515;pseudo=true PYKI01000933.1 Protein Homology CDS 38 181 . - 0 ID=cds-C9F07_08515;Parent=gene-C9F07_08515;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697689.1;locus_tag=C9F07_08515;product=replicase;pseudo=true;transl_table=11 ##sequence-region PYKI01002556.1 1 3046 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002556.1 Genbank region 1 3046 . + . ID=PYKI01002556.1:1..3046;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002556.1 Genbank pseudogene 54 254 . - . ID=gene-C9F07_25370;Name=tppB;gbkey=Gene;gene=tppB;gene_biotype=pseudogene;gene_synonym=ydgR;locus_tag=C9F07_25370;pseudo=true PYKI01002556.1 Protein Homology CDS 54 254 . - 0 ID=cds-C9F07_25370;Parent=gene-C9F07_25370;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=tppB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=C9F07_25370;product=dipeptide/tripeptide permease;pseudo=true;transl_table=11 PYKI01002556.1 Genbank gene 579 1013 . - . ID=gene-C9F07_25375;Name=C9F07_25375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25375 PYKI01002556.1 Protein Homology CDS 579 1013 . - 0 ID=cds-TGD49882.1;Parent=gene-C9F07_25375;Dbxref=NCBI_GP:TGD49882.1;Name=TGD49882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=C9F07_25375;product=universal stress protein A;protein_id=TGD49882.1;transl_table=11 PYKI01002556.1 Genbank gene 1401 1736 . + . ID=gene-C9F07_25380;Name=C9F07_25380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25380 PYKI01002556.1 Protein Homology CDS 1401 1736 . + 0 ID=cds-TGD49883.1;Parent=gene-C9F07_25380;Dbxref=NCBI_GP:TGD49883.1;Name=TGD49883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458327.1;locus_tag=C9F07_25380;product=universal stress protein UspB;protein_id=TGD49883.1;transl_table=11 PYKI01002556.1 Genbank gene 1878 3046 . - . ID=gene-C9F07_25385;Name=C9F07_25385;end_range=3046,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25385;partial=true PYKI01002556.1 Protein Homology CDS 1878 3046 . - 2 ID=cds-TGD49884.1;Parent=gene-C9F07_25385;Dbxref=NCBI_GP:TGD49884.1;Name=TGD49884.1;Note=involved in the transport of inorganic phosphate;end_range=3046,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458328.1;locus_tag=C9F07_25385;partial=true;product=anion permease;protein_id=TGD49884.1;transl_table=11 ##sequence-region PYKI01000229.1 1 459 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000229.1 Genbank region 1 459 . + . ID=PYKI01000229.1:1..459;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000229.1 Genbank pseudogene 30 233 . + . ID=gene-C9F07_01490;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=pseudogene;locus_tag=C9F07_01490;pseudo=true PYKI01000229.1 Protein Homology CDS 30 233 . + 0 ID=cds-C9F07_01490;Parent=gene-C9F07_01490;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=pntA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310336.1;locus_tag=C9F07_01490;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha;pseudo=true;transl_table=11 PYKI01000229.1 Genbank gene 244 459 . + . ID=gene-C9F07_01495;Name=pntB;end_range=459,.;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=C9F07_01495;partial=true PYKI01000229.1 Protein Homology CDS 244 459 . + 0 ID=cds-TGE27880.1;Parent=gene-C9F07_01495;Dbxref=NCBI_GP:TGE27880.1;Name=TGE27880.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;end_range=459,.;gbkey=CDS;gene=pntB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=C9F07_01495;partial=true;product=NAD(P) transhydrogenase subunit beta;protein_id=TGE27880.1;transl_table=11 ##sequence-region PYKI01000959.1 1 459 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000959.1 Genbank region 1 459 . + . ID=PYKI01000959.1:1..459;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000959.1 Genbank gene 1 459 . - . ID=gene-C9F07_08760;Name=C9F07_08760;end_range=459,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08760;partial=true;start_range=.,1 PYKI01000959.1 Protein Homology CDS 1 459 . - 1 ID=cds-TGE00921.1;Parent=gene-C9F07_08760;Dbxref=NCBI_GP:TGE00921.1;Name=TGE00921.1;Note=Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C;end_range=459,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=C9F07_08760;partial=true;product=DNA polymerase II;protein_id=TGE00921.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000269.1 1 459 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000269.1 Genbank region 1 459 . + . ID=PYKI01000269.1:1..459;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000269.1 Genbank gene 1 459 . + . ID=gene-C9F07_01745;Name=C9F07_01745;end_range=459,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01745;partial=true;start_range=.,1 PYKI01000269.1 Protein Homology CDS 1 459 . + 0 ID=cds-TGE27841.1;Parent=gene-C9F07_01745;Dbxref=NCBI_GP:TGE27841.1;Name=TGE27841.1;end_range=459,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457025.1;locus_tag=C9F07_01745;partial=true;product=thioredoxin-dependent thiol peroxidase;protein_id=TGE27841.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001898.1 1 458 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001898.1 Genbank region 1 458 . + . ID=PYKI01001898.1:1..458;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001898.1 Genbank gene 1 458 . - . ID=gene-C9F07_18295;Name=C9F07_18295;end_range=458,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18295;partial=true;start_range=.,1 PYKI01001898.1 Protein Homology CDS 1 458 . - 1 ID=cds-TGD61603.1;Parent=gene-C9F07_18295;Dbxref=NCBI_GP:TGD61603.1;Name=TGD61603.1;end_range=458,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462570.1;locus_tag=C9F07_18295;partial=true;product=DUF4862 domain-containing protein;protein_id=TGD61603.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002109.1 1 458 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002109.1 Genbank region 1 458 . + . ID=PYKI01002109.1:1..458;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002109.1 Genbank gene 1 348 . - . ID=gene-C9F07_20460;Name=C9F07_20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20460;partial=true;start_range=.,1 PYKI01002109.1 Protein Homology CDS 1 348 . - 0 ID=cds-TGD58342.1;Parent=gene-C9F07_20460;Dbxref=NCBI_GP:TGD58342.1;Name=TGD58342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457845.1;locus_tag=C9F07_20460;partial=true;product=branched chain amino acid aminotransferase;protein_id=TGD58342.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001211.1 1 458 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001211.1 Genbank region 1 458 . + . ID=PYKI01001211.1:1..458;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001211.1 Genbank gene 28 458 . + . ID=gene-C9F07_11345;Name=C9F07_11345;end_range=458,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11345;partial=true PYKI01001211.1 Protein Homology CDS 28 458 . + 0 ID=cds-TGD91396.1;Parent=gene-C9F07_11345;Dbxref=NCBI_GP:TGD91396.1;Name=TGD91396.1;end_range=458,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574913.1;locus_tag=C9F07_11345;partial=true;product=glycerate kinase;protein_id=TGD91396.1;transl_table=11 ##sequence-region PYKI01003113.1 1 458 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003113.1 Genbank region 1 458 . + . ID=PYKI01003113.1:1..458;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003113.1 Genbank gene 1 458 . - . ID=gene-C9F07_31145;Name=C9F07_31145;end_range=458,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31145;partial=true;start_range=.,1 PYKI01003113.1 Protein Homology CDS 1 458 . - 0 ID=cds-TGD39562.1;Parent=gene-C9F07_31145;Dbxref=NCBI_GP:TGD39562.1;Name=TGD39562.1;end_range=458,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454741.1;locus_tag=C9F07_31145;partial=true;product=UDP-N-acetylmuramate--alanine ligase;protein_id=TGD39562.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002563.1 1 457 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002563.1 Genbank region 1 457 . + . ID=PYKI01002563.1:1..457;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002563.1 Genbank gene 1 148 . - . ID=gene-C9F07_25445;Name=C9F07_25445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25445;partial=true;start_range=.,1 PYKI01002563.1 Protein Homology CDS 1 148 . - 0 ID=cds-TGD49839.1;Parent=gene-C9F07_25445;Dbxref=NCBI_GP:TGD49839.1;Name=TGD49839.1;Note=CobD%3B CbiB in Salmonella%3B converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456584.1;locus_tag=C9F07_25445;partial=true;product=cobalamin biosynthesis protein CobD;protein_id=TGD49839.1;start_range=.,1;transl_table=11 PYKI01002563.1 Genbank gene 145 457 . - . ID=gene-C9F07_25450;Name=C9F07_25450;end_range=457,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25450;partial=true PYKI01002563.1 Protein Homology CDS 145 457 . - 1 ID=cds-TGD49840.1;Parent=gene-C9F07_25450;Dbxref=NCBI_GP:TGD49840.1;Name=TGD49840.1;end_range=457,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456585.1;locus_tag=C9F07_25450;partial=true;product=cobyrinic acid a%2Cc-diamide synthase;protein_id=TGD49840.1;transl_table=11 ##sequence-region PYKI01001355.1 1 457 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001355.1 Genbank region 1 457 . + . ID=PYKI01001355.1:1..457;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001355.1 Genbank gene 10 457 . - . ID=gene-C9F07_12725;Name=wcaM;end_range=457,.;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=C9F07_12725;partial=true PYKI01001355.1 Protein Homology CDS 10 457 . - 1 ID=cds-TGD85075.1;Parent=gene-C9F07_12725;Dbxref=NCBI_GP:TGD85075.1;Name=TGD85075.1;Note=WcaM from Salmonella enterica is essential for biofilm formation on HEp-2 cells and chicken intestinal tissue but not on a plastic surface%3B may be involved in the biosynthesis of colanic acid;end_range=457,.;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=C9F07_12725;partial=true;product=colanic acid biosynthesis protein WcaM;protein_id=TGD85075.1;transl_table=11 ##sequence-region PYKI01002149.1 1 3045 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002149.1 Genbank region 1 3045 . + . ID=PYKI01002149.1:1..3045;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002149.1 Genbank gene 17 289 . - . ID=gene-C9F07_20875;Name=C9F07_20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20875 PYKI01002149.1 Protein Homology CDS 17 289 . - 0 ID=cds-TGD57463.1;Parent=gene-C9F07_20875;Dbxref=NCBI_GP:TGD57463.1;Name=TGD57463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463245.1;locus_tag=C9F07_20875;product=PTS ascorbate transporter subunit IIB;protein_id=TGD57463.1;transl_table=11 PYKI01002149.1 Genbank gene 305 1702 . - . ID=gene-C9F07_20880;Name=C9F07_20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20880 PYKI01002149.1 Protein Homology CDS 305 1702 . - 0 ID=cds-TGD57464.1;Parent=gene-C9F07_20880;Dbxref=NCBI_GP:TGD57464.1;Name=TGD57464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=C9F07_20880;product=ascorbate-specific permease IIC component UlaA;protein_id=TGD57464.1;transl_table=11 PYKI01002149.1 Genbank gene 2065 3045 . + . ID=gene-C9F07_20885;Name=C9F07_20885;end_range=3045,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20885;partial=true PYKI01002149.1 Protein Homology CDS 2065 3045 . + 0 ID=cds-TGD57465.1;Parent=gene-C9F07_20885;Dbxref=NCBI_GP:TGD57465.1;Name=TGD57465.1;end_range=3045,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=C9F07_20885;partial=true;product=L-ascorbate 6-phosphate lactonase;protein_id=TGD57465.1;transl_table=11 ##sequence-region PYKI01000888.1 1 456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000888.1 Genbank region 1 456 . + . ID=PYKI01000888.1:1..456;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000888.1 Genbank gene 1 456 . + . ID=gene-C9F07_08135;Name=C9F07_08135;end_range=456,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08135;partial=true;start_range=.,1 PYKI01000888.1 Protein Homology CDS 1 456 . + 2 ID=cds-TGE03884.1;Parent=gene-C9F07_08135;Dbxref=NCBI_GP:TGE03884.1;Name=TGE03884.1;end_range=456,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455374.1;locus_tag=C9F07_08135;partial=true;product=hypothetical protein;protein_id=TGE03884.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000620.1 1 455 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000620.1 Genbank region 1 455 . + . ID=PYKI01000620.1:1..455;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000620.1 Genbank pseudogene 128 372 . - . ID=gene-C9F07_05325;Name=C9F07_05325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05325;pseudo=true PYKI01000620.1 Protein Homology CDS 128 372 . - 0 ID=cds-C9F07_05325;Parent=gene-C9F07_05325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455145.1;locus_tag=C9F07_05325;product=copper-binding protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000176.1 1 454 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000176.1 Genbank region 1 454 . + . ID=PYKI01000176.1:1..454;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000176.1 Genbank gene 1 188 . - . ID=gene-C9F07_01200;Name=C9F07_01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01200;partial=true;start_range=.,1 PYKI01000176.1 Protein Homology CDS 1 188 . - 0 ID=cds-TGE30050.1;Parent=gene-C9F07_01200;Dbxref=NCBI_GP:TGE30050.1;Name=TGE30050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=C9F07_01200;partial=true;product=virulence factor MviM;protein_id=TGE30050.1;start_range=.,1;transl_table=11 PYKI01000176.1 Genbank pseudogene 190 363 . - . ID=gene-C9F07_01205;Name=C9F07_01205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01205;pseudo=true PYKI01000176.1 Protein Homology CDS 190 363 . - 0 ID=cds-C9F07_01205;Parent=gene-C9F07_01205;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455661.1;locus_tag=C9F07_01205;product=DUF480 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002586.1 1 454 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002586.1 Genbank region 1 454 . + . ID=PYKI01002586.1:1..454;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002586.1 Genbank gene 1 112 . + . ID=gene-C9F07_25660;Name=C9F07_25660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25660;partial=true;start_range=.,1 PYKI01002586.1 Protein Homology CDS 1 112 . + 1 ID=cds-TGD49708.1;Parent=gene-C9F07_25660;Dbxref=NCBI_GP:TGD49708.1;Name=TGD49708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455023.1;locus_tag=C9F07_25660;partial=true;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=TGD49708.1;start_range=.,1;transl_table=11 PYKI01002586.1 Genbank gene 118 454 . + . ID=gene-C9F07_25665;Name=C9F07_25665;end_range=454,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25665;partial=true PYKI01002586.1 Protein Homology CDS 118 454 . + 0 ID=cds-TGD49709.1;Parent=gene-C9F07_25665;Dbxref=NCBI_GP:TGD49709.1;Name=TGD49709.1;end_range=454,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455022.1;locus_tag=C9F07_25665;partial=true;product=hypothetical protein;protein_id=TGD49709.1;transl_table=11 ##sequence-region PYKI01002683.1 1 453 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002683.1 Genbank region 1 453 . + . ID=PYKI01002683.1:1..453;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002683.1 Genbank gene 1 453 . - . ID=gene-C9F07_26730;Name=C9F07_26730;end_range=453,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26730;partial=true;start_range=.,1 PYKI01002683.1 Protein Homology CDS 1 453 . - 2 ID=cds-TGD48655.1;Parent=gene-C9F07_26730;Dbxref=NCBI_GP:TGD48655.1;Name=TGD48655.1;end_range=453,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456067.1;locus_tag=C9F07_26730;partial=true;product=adenosine deaminase;protein_id=TGD48655.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000366.1 1 452 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000366.1 Genbank region 1 452 . + . ID=PYKI01000366.1:1..452;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000366.1 Genbank gene 1 452 . + . ID=gene-C9F07_02765;Name=C9F07_02765;end_range=452,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02765;partial=true;start_range=.,1 PYKI01000366.1 Protein Homology CDS 1 452 . + 1 ID=cds-TGE23190.1;Parent=gene-C9F07_02765;Dbxref=NCBI_GP:TGE23190.1;Name=TGE23190.1;end_range=452,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=C9F07_02765;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGE23190.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002262.1 1 452 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002262.1 Genbank region 1 452 . + . ID=PYKI01002262.1:1..452;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002262.1 Genbank pseudogene 65 452 . - . ID=gene-C9F07_22130;Name=C9F07_22130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22130;pseudo=true PYKI01002262.1 Protein Homology CDS 65 452 . - 1 ID=cds-C9F07_22130;Parent=gene-C9F07_22130;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458861.1;locus_tag=C9F07_22130;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002822.1 1 451 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002822.1 Genbank region 1 451 . + . ID=PYKI01002822.1:1..451;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002822.1 Genbank gene 94 169 . + . ID=gene-C9F07_28230;Name=C9F07_28230;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_28230 PYKI01002822.1 tRNAscan-SE tRNA 94 169 . + . ID=rna-C9F07_28230;Parent=gene-C9F07_28230;anticodon=(pos:127..129);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_28230;product=tRNA-Thr PYKI01002822.1 tRNAscan-SE exon 94 169 . + . ID=exon-C9F07_28230-1;Parent=rna-C9F07_28230;anticodon=(pos:127..129);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_28230;product=tRNA-Thr PYKI01002822.1 Genbank gene 209 324 . + . ID=gene-C9F07_28235;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F07_28235 PYKI01002822.1 cmsearch rRNA 209 324 . + . ID=rna-C9F07_28235;Parent=gene-C9F07_28235;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00001,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_28235;product=5S ribosomal RNA PYKI01002822.1 cmsearch exon 209 324 . + . ID=exon-C9F07_28235-1;Parent=rna-C9F07_28235;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00001,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_28235;product=5S ribosomal RNA ##sequence-region PYKI01001580.1 1 450 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001580.1 Genbank region 1 450 . + . ID=PYKI01001580.1:1..450;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001580.1 Genbank pseudogene 1 389 . - . ID=gene-C9F07_15120;Name=C9F07_15120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15120;pseudo=true PYKI01001580.1 Protein Homology CDS 1 389 . - 0 ID=cds-C9F07_15120;Parent=gene-C9F07_15120;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=C9F07_15120;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01002454.1 1 3044 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002454.1 Genbank region 1 3044 . + . ID=PYKI01002454.1:1..3044;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002454.1 Genbank gene 1 1682 . + . ID=gene-C9F07_24240;Name=C9F07_24240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24240;partial=true;start_range=.,1 PYKI01002454.1 Protein Homology CDS 1 1682 . + 2 ID=cds-TGD50858.1;Parent=gene-C9F07_24240;Dbxref=NCBI_GP:TGD50858.1;Name=TGD50858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458302.1;locus_tag=C9F07_24240;partial=true;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=TGD50858.1;start_range=.,1;transl_table=11 PYKI01002454.1 Genbank gene 1686 2795 . + . ID=gene-C9F07_24245;Name=C9F07_24245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24245 PYKI01002454.1 Protein Homology CDS 1686 2795 . + 0 ID=cds-TGD50859.1;Parent=gene-C9F07_24245;Dbxref=NCBI_GP:TGD50859.1;Name=TGD50859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458303.1;locus_tag=C9F07_24245;product=cellulase;protein_id=TGD50859.1;transl_table=11 PYKI01002454.1 Genbank pseudogene 2777 2998 . + . ID=gene-C9F07_24250;Name=C9F07_24250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24250;pseudo=true PYKI01002454.1 Protein Homology CDS 2777 2998 . + 0 ID=cds-C9F07_24250;Parent=gene-C9F07_24250;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=C9F07_24250;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002616.1 1 450 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002616.1 Genbank region 1 450 . + . ID=PYKI01002616.1:1..450;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002616.1 Genbank gene 43 450 . - . ID=gene-C9F07_26020;Name=arnT;end_range=450,.;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=C9F07_26020;partial=true PYKI01002616.1 Protein Homology CDS 43 450 . - 0 ID=cds-TGD49538.1;Parent=gene-C9F07_26020;Dbxref=NCBI_GP:TGD49538.1;Name=TGD49538.1;Note=catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A;end_range=450,.;gbkey=CDS;gene=arnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=C9F07_26020;partial=true;product=4-amino-4-deoxy-L-arabinose lipid A transferase;protein_id=TGD49538.1;transl_table=11 ##sequence-region PYKI01003087.1 1 450 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003087.1 Genbank region 1 450 . + . ID=PYKI01003087.1:1..450;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003087.1 Genbank gene 1 450 . - . ID=gene-C9F07_30910;Name=C9F07_30910;end_range=450,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30910;partial=true;start_range=.,1 PYKI01003087.1 Protein Homology CDS 1 450 . - 0 ID=cds-TGD40086.1;Parent=gene-C9F07_30910;Dbxref=NCBI_GP:TGD40086.1;Name=TGD40086.1;end_range=450,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456283.1;locus_tag=C9F07_30910;partial=true;product=hypothetical protein;protein_id=TGD40086.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002280.1 1 449 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002280.1 Genbank region 1 449 . + . ID=PYKI01002280.1:1..449;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01000015.1 1 448 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000015.1 Genbank region 1 448 . + . ID=PYKI01000015.1:1..448;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000015.1 Genbank gene 1 285 . + . ID=gene-C9F07_00080;Name=C9F07_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00080;partial=true;start_range=.,1 PYKI01000015.1 Protein Homology CDS 1 285 . + 0 ID=cds-TGE30215.1;Parent=gene-C9F07_00080;Dbxref=NCBI_GP:TGE30215.1;Name=TGE30215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457396.1;locus_tag=C9F07_00080;partial=true;product=prolipoprotein diacylglyceryl transferase;protein_id=TGE30215.1;start_range=.,1;transl_table=11 PYKI01000015.1 Genbank gene 292 448 . + . ID=gene-C9F07_00085;Name=C9F07_00085;end_range=448,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00085;partial=true PYKI01000015.1 Protein Homology CDS 292 448 . + 0 ID=cds-TGE30216.1;Parent=gene-C9F07_00085;Dbxref=NCBI_GP:TGE30216.1;Name=TGE30216.1;end_range=448,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=C9F07_00085;partial=true;product=thymidylate synthase;protein_id=TGE30216.1;transl_table=11 ##sequence-region PYKI01001304.1 1 448 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001304.1 Genbank region 1 448 . + . ID=PYKI01001304.1:1..448;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001304.1 Genbank gene 1 386 . + . ID=gene-C9F07_12225;Name=C9F07_12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12225;partial=true;start_range=.,1 PYKI01001304.1 Protein Homology CDS 1 386 . + 2 ID=cds-TGD86943.1;Parent=gene-C9F07_12225;Dbxref=NCBI_GP:TGD86943.1;Name=TGD86943.1;Note=catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415524.1;locus_tag=C9F07_12225;partial=true;product=NAD(P)H:quinone oxidoreductase;protein_id=TGD86943.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002538.1 1 448 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002538.1 Genbank region 1 448 . + . ID=PYKI01002538.1:1..448;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002538.1 Genbank pseudogene 86 403 . + . ID=gene-C9F07_25180;Name=C9F07_25180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25180;pseudo=true PYKI01002538.1 Protein Homology CDS 86 403 . + 0 ID=cds-C9F07_25180;Parent=gene-C9F07_25180;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456336.1;locus_tag=C9F07_25180;product=PTS mannose transporter subunit IIAB;pseudo=true;transl_table=11 ##sequence-region PYKI01002617.1 1 448 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002617.1 Genbank region 1 448 . + . ID=PYKI01002617.1:1..448;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002617.1 Genbank pseudogene 74 343 . + . ID=gene-C9F07_26025;Name=C9F07_26025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26025;pseudo=true PYKI01002617.1 Protein Homology CDS 74 343 . + 0 ID=cds-C9F07_26025;Parent=gene-C9F07_26025;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458701.1;locus_tag=C9F07_26025;product=peptidase;pseudo=true;transl_table=11 ##sequence-region PYKI01003428.1 1 447 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003428.1 Genbank region 1 447 . + . ID=PYKI01003428.1:1..447;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003428.1 Genbank gene 1 447 . + . ID=gene-C9F07_34450;Name=C9F07_34450;end_range=447,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34450;partial=true;start_range=.,1 PYKI01003428.1 Protein Homology CDS 1 447 . + 0 ID=cds-TGD33560.1;Parent=gene-C9F07_34450;Dbxref=NCBI_GP:TGD33560.1;Name=TGD33560.1;end_range=447,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=C9F07_34450;partial=true;product=hypothetical protein;protein_id=TGD33560.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000685.1 1 447 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000685.1 Genbank region 1 447 . + . ID=PYKI01000685.1:1..447;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000685.1 Genbank gene 1 447 . - . ID=gene-C9F07_05975;Name=C9F07_05975;end_range=447,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05975;partial=true;start_range=.,1 PYKI01000685.1 Protein Homology CDS 1 447 . - 0 ID=cds-TGE11424.1;Parent=gene-C9F07_05975;Dbxref=NCBI_GP:TGE11424.1;Name=TGE11424.1;end_range=447,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458596.1;locus_tag=C9F07_05975;partial=true;product=transcriptional regulator MelR;protein_id=TGE11424.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000481.1 1 447 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000481.1 Genbank region 1 447 . + . ID=PYKI01000481.1:1..447;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000481.1 Genbank gene 1 302 . + . ID=gene-C9F07_03850;Name=C9F07_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03850;partial=true;start_range=.,1 PYKI01000481.1 Protein Homology CDS 1 302 . + 2 ID=cds-TGE18680.1;Parent=gene-C9F07_03850;Dbxref=NCBI_GP:TGE18680.1;Name=TGE18680.1;Note=PriC%3B protein involved in DNA replication%3B part of the primosome%2C a protein complex required to restart stalled replication forks%3B binds the complex formed by PriA%2C PriB and DNA%3B PriC-dependent primosome requires a gap to restart DNA replication%3B stimulates Rep activity at stalled forks;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459476.1;locus_tag=C9F07_03850;partial=true;product=primosomal replication protein N'';protein_id=TGE18680.1;start_range=.,1;transl_table=11 PYKI01000481.1 Genbank gene 316 447 . + . ID=gene-C9F07_03855;Name=C9F07_03855;end_range=447,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03855;partial=true PYKI01000481.1 Protein Homology CDS 316 447 . + 0 ID=cds-TGE18681.1;Parent=gene-C9F07_03855;Dbxref=NCBI_GP:TGE18681.1;Name=TGE18681.1;end_range=447,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308546.1;locus_tag=C9F07_03855;partial=true;product=DUF2496 domain-containing protein;protein_id=TGE18681.1;transl_table=11 ##sequence-region PYKI01001878.1 1 3042 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001878.1 Genbank region 1 3042 . + . ID=PYKI01001878.1:1..3042;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001878.1 Genbank gene 1 217 . - . ID=gene-C9F07_18100;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;gene_synonym=yceP;locus_tag=C9F07_18100;partial=true;start_range=.,1 PYKI01001878.1 Protein Homology CDS 1 217 . - 0 ID=cds-TGD62335.1;Parent=gene-C9F07_18100;Dbxref=NCBI_GP:TGD62335.1;Name=TGD62335.1;Note=BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=C9F07_18100;partial=true;product=transcriptional regulator;protein_id=TGD62335.1;start_range=.,1;transl_table=11 PYKI01001878.1 Genbank gene 507 752 . - . ID=gene-C9F07_18105;Name=C9F07_18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18105 PYKI01001878.1 Protein Homology CDS 507 752 . - 0 ID=cds-TGD62336.1;Parent=gene-C9F07_18105;Dbxref=NCBI_GP:TGD62336.1;Name=TGD62336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=C9F07_18105;product=DNA damage-inducible protein I;protein_id=TGD62336.1;transl_table=11 PYKI01001878.1 Genbank gene 826 1872 . - . ID=gene-C9F07_18110;Name=C9F07_18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18110 PYKI01001878.1 Protein Homology CDS 826 1872 . - 0 ID=cds-TGD62337.1;Parent=gene-C9F07_18110;Dbxref=NCBI_GP:TGD62337.1;Name=TGD62337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=C9F07_18110;product=dihydroorotase;protein_id=TGD62337.1;transl_table=11 PYKI01001878.1 Genbank pseudogene 1975 2535 . - . ID=gene-C9F07_18115;Name=C9F07_18115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18115;pseudo=true PYKI01001878.1 Protein Homology CDS 1975 2535 . - 0 ID=cds-C9F07_18115;Parent=gene-C9F07_18115;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=C9F07_18115;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001878.1 Genbank gene 2660 3042 . - . ID=gene-C9F07_18120;Name=C9F07_18120;end_range=3042,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18120;partial=true PYKI01001878.1 Protein Homology CDS 2660 3042 . - 2 ID=cds-TGD62338.1;Parent=gene-C9F07_18120;Dbxref=NCBI_GP:TGD62338.1;Name=TGD62338.1;end_range=3042,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455658.1;locus_tag=C9F07_18120;partial=true;product=glutaredoxin 2;protein_id=TGD62338.1;transl_table=11 ##sequence-region PYKI01001253.1 1 446 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001253.1 Genbank region 1 446 . + . ID=PYKI01001253.1:1..446;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001253.1 Genbank gene 1 446 . - . ID=gene-C9F07_11700;Name=C9F07_11700;end_range=446,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11700;partial=true;start_range=.,1 PYKI01001253.1 Protein Homology CDS 1 446 . - 1 ID=cds-TGD89546.1;Parent=gene-C9F07_11700;Dbxref=NCBI_GP:TGD89546.1;Name=TGD89546.1;end_range=446,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457468.1;locus_tag=C9F07_11700;partial=true;product=phosphoglycerate kinase;protein_id=TGD89546.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000321.1 1 445 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000321.1 Genbank region 1 445 . + . ID=PYKI01000321.1:1..445;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000321.1 Genbank gene 1 445 . + . ID=gene-C9F07_02215;Name=C9F07_02215;end_range=445,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02215;partial=true;start_range=.,1 PYKI01000321.1 Protein Homology CDS 1 445 . + 2 ID=cds-TGE26882.1;Parent=gene-C9F07_02215;Dbxref=NCBI_GP:TGE26882.1;Name=TGE26882.1;end_range=445,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456823.1;locus_tag=C9F07_02215;partial=true;product=MFS transporter;protein_id=TGE26882.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002404.1 1 444 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002404.1 Genbank region 1 444 . + . ID=PYKI01002404.1:1..444;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002404.1 Genbank gene 1 425 . - . ID=gene-C9F07_23705;Name=C9F07_23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23705;partial=true;start_range=.,1 PYKI01002404.1 Protein Homology CDS 1 425 . - 0 ID=cds-TGD51864.1;Parent=gene-C9F07_23705;Dbxref=NCBI_GP:TGD51864.1;Name=TGD51864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004724502.1;locus_tag=C9F07_23705;partial=true;product=hypothetical protein;protein_id=TGD51864.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002311.1 1 444 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002311.1 Genbank region 1 444 . + . ID=PYKI01002311.1:1..444;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002311.1 Genbank gene 1 444 . + . ID=gene-C9F07_22655;Name=C9F07_22655;end_range=444,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22655;partial=true;start_range=.,1 PYKI01002311.1 Protein Homology CDS 1 444 . + 1 ID=cds-TGD54251.1;Parent=gene-C9F07_22655;Dbxref=NCBI_GP:TGD54251.1;Name=TGD54251.1;Note=decatenates replicating daughter chromosomes;end_range=444,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=C9F07_22655;partial=true;product=DNA topoisomerase III;protein_id=TGD54251.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000797.1 1 444 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000797.1 Genbank region 1 444 . + . ID=PYKI01000797.1:1..444;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000797.1 Genbank gene 229 444 . + . ID=gene-C9F07_07175;Name=C9F07_07175;end_range=444,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07175;partial=true PYKI01000797.1 Protein Homology CDS 229 444 . + 0 ID=cds-TGE09145.1;Parent=gene-C9F07_07175;Dbxref=NCBI_GP:TGE09145.1;Name=TGE09145.1;end_range=444,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457078.1;locus_tag=C9F07_07175;partial=true;product=alpha/beta hydrolase;protein_id=TGE09145.1;transl_table=11 ##sequence-region PYKI01003512.1 1 443 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003512.1 Genbank region 1 443 . + . ID=PYKI01003512.1:1..443;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003512.1 Genbank pseudogene 33 443 . - . ID=gene-C9F07_35420;Name=C9F07_35420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35420;pseudo=true PYKI01003512.1 Protein Homology CDS 33 443 . - 0 ID=cds-C9F07_35420;Parent=gene-C9F07_35420;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457109.1;locus_tag=C9F07_35420;product=GTPase Era;pseudo=true;transl_table=11 ##sequence-region PYKI01000287.1 1 442 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000287.1 Genbank region 1 442 . + . ID=PYKI01000287.1:1..442;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000287.1 Genbank gene 1 442 . + . ID=gene-C9F07_01870;Name=C9F07_01870;end_range=442,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01870;partial=true;start_range=.,1 PYKI01000287.1 Protein Homology CDS 1 442 . + 2 ID=cds-TGE27819.1;Parent=gene-C9F07_01870;Dbxref=NCBI_GP:TGE27819.1;Name=TGE27819.1;end_range=442,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=C9F07_01870;partial=true;product=NADH-quinone oxidoreductase subunit H;protein_id=TGE27819.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003310.1 1 442 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003310.1 Genbank region 1 442 . + . ID=PYKI01003310.1:1..442;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003310.1 Genbank gene 1 442 . + . ID=gene-C9F07_33300;Name=C9F07_33300;end_range=442,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33300;partial=true;start_range=.,1 PYKI01003310.1 Protein Homology CDS 1 442 . + 0 ID=cds-TGD36008.1;Parent=gene-C9F07_33300;Dbxref=NCBI_GP:TGD36008.1;Name=TGD36008.1;end_range=442,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459345.3;locus_tag=C9F07_33300;partial=true;product=multidrug transporter;protein_id=TGD36008.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001549.1 1 3039 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001549.1 Genbank region 1 3039 . + . ID=PYKI01001549.1:1..3039;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001549.1 Genbank pseudogene 87 449 . - . ID=gene-C9F07_14840;Name=C9F07_14840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14840;pseudo=true PYKI01001549.1 Protein Homology CDS 87 449 . - 0 ID=cds-C9F07_14840;Parent=gene-C9F07_14840;Note=with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=C9F07_14840;product=peptide ABC transporter permease;pseudo=true;transl_table=11 PYKI01001549.1 Genbank gene 464 1384 . - . ID=gene-C9F07_14845;Name=C9F07_14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14845 PYKI01001549.1 Protein Homology CDS 464 1384 . - 0 ID=cds-TGD74551.1;Parent=gene-C9F07_14845;Dbxref=NCBI_GP:TGD74551.1;Name=TGD74551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=C9F07_14845;product=peptide ABC transporter permease;protein_id=TGD74551.1;transl_table=11 PYKI01001549.1 Genbank gene 1507 3039 . - . ID=gene-C9F07_14850;Name=C9F07_14850;end_range=3039,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14850;partial=true PYKI01001549.1 Protein Homology CDS 1507 3039 . - 0 ID=cds-TGD74552.1;Parent=gene-C9F07_14850;Dbxref=NCBI_GP:TGD74552.1;Name=TGD74552.1;end_range=3039,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460705.3;locus_tag=C9F07_14850;partial=true;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=TGD74552.1;transl_table=11 ##sequence-region PYKI01002867.1 1 441 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002867.1 Genbank region 1 441 . + . ID=PYKI01002867.1:1..441;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002867.1 Genbank gene 1 441 . + . ID=gene-C9F07_28730;Name=C9F07_28730;end_range=441,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28730;partial=true;start_range=.,1 PYKI01002867.1 Protein Homology CDS 1 441 . + 2 ID=cds-TGD44952.1;Parent=gene-C9F07_28730;Dbxref=NCBI_GP:TGD44952.1;Name=TGD44952.1;end_range=441,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456328.1;locus_tag=C9F07_28730;partial=true;product=ATP-dependent helicase;protein_id=TGD44952.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000103.1 1 441 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000103.1 Genbank region 1 441 . + . ID=PYKI01000103.1:1..441;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000103.1 Genbank gene 121 312 . - . ID=gene-C9F07_00655;Name=C9F07_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00655 PYKI01000103.1 Protein Homology CDS 121 312 . - 0 ID=cds-TGE30135.1;Parent=gene-C9F07_00655;Dbxref=NCBI_GP:TGE30135.1;Name=TGE30135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002414384.1;locus_tag=C9F07_00655;product=hypothetical protein;protein_id=TGE30135.1;transl_table=11 ##sequence-region PYKI01000818.1 1 440 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000818.1 Genbank region 1 440 . + . ID=PYKI01000818.1:1..440;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000818.1 Genbank gene 1 440 . - . ID=gene-C9F07_07400;Name=C9F07_07400;end_range=440,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07400;partial=true;start_range=.,1 PYKI01000818.1 Protein Homology CDS 1 440 . - 1 ID=cds-TGE07512.1;Parent=gene-C9F07_07400;Dbxref=NCBI_GP:TGE07512.1;Name=TGE07512.1;Note=DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate;end_range=440,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=C9F07_07400;partial=true;product=bifunctional succinylornithine transaminase/acetylornithine transaminase;protein_id=TGE07512.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002171.1 1 440 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002171.1 Genbank region 1 440 . + . ID=PYKI01002171.1:1..440;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002171.1 Genbank gene 1 360 . - . ID=gene-C9F07_21100;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=C9F07_21100;partial=true;start_range=.,1 PYKI01002171.1 Protein Homology CDS 1 360 . - 0 ID=cds-TGD56990.1;Parent=gene-C9F07_21100;Dbxref=NCBI_GP:TGD56990.1;Name=TGD56990.1;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;gbkey=CDS;gene=infB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=C9F07_21100;partial=true;product=translation initiation factor IF-2;protein_id=TGD56990.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001557.1 1 439 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001557.1 Genbank region 1 439 . + . ID=PYKI01001557.1:1..439;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001557.1 Genbank gene 1 439 . - . ID=gene-C9F07_14915;Name=C9F07_14915;end_range=439,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14915;partial=true;start_range=.,1 PYKI01001557.1 Protein Homology CDS 1 439 . - 2 ID=cds-TGD74436.1;Parent=gene-C9F07_14915;Dbxref=NCBI_GP:TGD74436.1;Name=TGD74436.1;end_range=439,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456756.1;locus_tag=C9F07_14915;partial=true;product=phosphoserine phosphatase SerB;protein_id=TGD74436.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001273.1 1 439 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001273.1 Genbank region 1 439 . + . ID=PYKI01001273.1:1..439;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001273.1 Genbank gene 1 439 . - . ID=gene-C9F07_11905;Name=C9F07_11905;end_range=439,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11905;partial=true;start_range=.,1 PYKI01001273.1 Protein Homology CDS 1 439 . - 1 ID=cds-TGD88702.1;Parent=gene-C9F07_11905;Dbxref=NCBI_GP:TGD88702.1;Name=TGD88702.1;end_range=439,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457531.1;locus_tag=C9F07_11905;partial=true;product=fructuronate reductase;protein_id=TGD88702.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000257.1 1 439 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000257.1 Genbank region 1 439 . + . ID=PYKI01000257.1:1..439;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000257.1 Genbank pseudogene 103 439 . + . ID=gene-C9F07_01675;Name=C9F07_01675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01675;pseudo=true PYKI01000257.1 Protein Homology CDS 103 439 . + 0 ID=cds-C9F07_01675;Parent=gene-C9F07_01675;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=C9F07_01675;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;pseudo=true;transl_table=11 ##sequence-region PYKI01002423.1 1 438 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002423.1 Genbank region 1 438 . + . ID=PYKI01002423.1:1..438;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002423.1 Genbank gene 1 438 . + . ID=gene-C9F07_23955;Name=C9F07_23955;end_range=438,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23955;partial=true;start_range=.,1 PYKI01002423.1 Protein Homology CDS 1 438 . + 1 ID=cds-TGD51444.1;Parent=gene-C9F07_23955;Dbxref=NCBI_GP:TGD51444.1;Name=TGD51444.1;Note=FAD/NAD(P)-binding domain%3B possibly part of an electron transfer system required for anaerobic carnitine reduction;end_range=438,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454687.1;locus_tag=C9F07_23955;partial=true;product=FAD-dependent oxidoreductase;protein_id=TGD51444.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001169.1 1 438 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001169.1 Genbank region 1 438 . + . ID=PYKI01001169.1:1..438;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001169.1 Genbank gene 1 438 . + . ID=gene-C9F07_10920;Name=C9F07_10920;end_range=438,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10920;partial=true;start_range=.,1 PYKI01001169.1 Protein Homology CDS 1 438 . + 2 ID=cds-TGD93034.1;Parent=gene-C9F07_10920;Dbxref=NCBI_GP:TGD93034.1;Name=TGD93034.1;end_range=438,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=C9F07_10920;partial=true;product=hypothetical protein;protein_id=TGD93034.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002687.1 1 437 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002687.1 Genbank region 1 437 . + . ID=PYKI01002687.1:1..437;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002687.1 Genbank gene 1 437 . + . ID=gene-C9F07_26750;Name=flgI;end_range=437,.;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=C9F07_26750;partial=true;start_range=.,1 PYKI01002687.1 Protein Homology CDS 1 437 . + 2 ID=cds-TGD48426.1;Parent=gene-C9F07_26750;Dbxref=NCBI_GP:TGD48426.1;Name=TGD48426.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum;end_range=437,.;gbkey=CDS;gene=flgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455674.1;locus_tag=C9F07_26750;partial=true;product=flagellar biosynthesis protein FlgA;protein_id=TGD48426.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002504.1 1 3033 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002504.1 Genbank region 1 3033 . + . ID=PYKI01002504.1:1..3033;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002504.1 Genbank gene 1 660 . - . ID=gene-C9F07_24790;Name=C9F07_24790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24790;partial=true;start_range=.,1 PYKI01002504.1 Protein Homology CDS 1 660 . - 0 ID=cds-TGD50241.1;Parent=gene-C9F07_24790;Dbxref=NCBI_GP:TGD50241.1;Name=TGD50241.1;Note=3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458804.1;locus_tag=C9F07_24790;partial=true;product=ribonuclease R;protein_id=TGD50241.1;start_range=.,1;transl_table=11 PYKI01002504.1 Genbank gene 698 1123 . - . ID=gene-C9F07_24795;Name=C9F07_24795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24795 PYKI01002504.1 Protein Homology CDS 698 1123 . - 0 ID=cds-TGD50242.1;Parent=gene-C9F07_24795;Dbxref=NCBI_GP:TGD50242.1;Name=TGD50242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=C9F07_24795;product=transcriptional regulator;protein_id=TGD50242.1;transl_table=11 PYKI01002504.1 Genbank gene 1104 1304 . + . ID=gene-C9F07_24800;Name=C9F07_24800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24800 PYKI01002504.1 Protein Homology CDS 1104 1304 . + 0 ID=cds-TGD50243.1;Parent=gene-C9F07_24800;Dbxref=NCBI_GP:TGD50243.1;Name=TGD50243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001326825.1;locus_tag=C9F07_24800;product=hypothetical protein;protein_id=TGD50243.1;transl_table=11 PYKI01002504.1 Genbank gene 1343 2641 . - . ID=gene-C9F07_24805;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=C9F07_24805 PYKI01002504.1 Protein Homology CDS 1343 2641 . - 0 ID=cds-TGD50244.1;Parent=gene-C9F07_24805;Dbxref=NCBI_GP:TGD50244.1;Name=TGD50244.1;gbkey=CDS;gene=purA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=C9F07_24805;product=adenylosuccinate synthase;protein_id=TGD50244.1;transl_table=11 PYKI01002504.1 Genbank pseudogene 2744 2941 . - . ID=gene-C9F07_24810;Name=C9F07_24810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24810;pseudo=true PYKI01002504.1 Protein Homology CDS 2744 2941 . - 0 ID=cds-C9F07_24810;Parent=gene-C9F07_24810;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458801.1;locus_tag=C9F07_24810;product=DUF2065 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002665.1 1 437 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002665.1 Genbank region 1 437 . + . ID=PYKI01002665.1:1..437;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01001799.1 1 437 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001799.1 Genbank region 1 437 . + . ID=PYKI01001799.1:1..437;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001799.1 Genbank pseudogene 1 368 . + . ID=gene-C9F07_17320;Name=C9F07_17320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17320;pseudo=true PYKI01001799.1 Protein Homology CDS 1 368 . + 2 ID=cds-C9F07_17320;Parent=gene-C9F07_17320;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%3B catalyzes the phosphorylation of maltose and glucose concomitant with their translocation across the cell membrane%3B component IIB catalyzes the phosphorylation of the sugar molecule%3B IIC forms the translocation channel and contains the substrate specific binding site%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=C9F07_17320;product=PTS sugar transporter subunit IIBC;pseudo=true;transl_table=11 ##sequence-region PYKI01001803.1 1 437 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001803.1 Genbank region 1 437 . + . ID=PYKI01001803.1:1..437;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001803.1 Genbank gene 1 307 . + . ID=gene-C9F07_17370;Name=C9F07_17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17370;partial=true;start_range=.,1 PYKI01001803.1 Protein Homology CDS 1 307 . + 1 ID=cds-TGD65902.1;Parent=gene-C9F07_17370;Dbxref=NCBI_GP:TGD65902.1;Name=TGD65902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458341.1;locus_tag=C9F07_17370;partial=true;product=hypothetical protein;protein_id=TGD65902.1;start_range=.,1;transl_table=11 PYKI01001803.1 Genbank gene 311 437 . - . ID=gene-C9F07_17375;Name=C9F07_17375;end_range=437,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17375;partial=true PYKI01001803.1 Protein Homology CDS 311 437 . - 1 ID=cds-TGD65903.1;Parent=gene-C9F07_17375;Dbxref=NCBI_GP:TGD65903.1;Name=TGD65903.1;end_range=437,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458340.1;locus_tag=C9F07_17375;partial=true;product=MFS transporter;protein_id=TGD65903.1;transl_table=11 ##sequence-region PYKI01001316.1 1 436 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001316.1 Genbank region 1 436 . + . ID=PYKI01001316.1:1..436;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001316.1 Genbank gene 101 436 . + . ID=gene-C9F07_12320;Name=C9F07_12320;end_range=436,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12320;partial=true PYKI01001316.1 Protein Homology CDS 101 436 . + 0 ID=cds-TGD86394.1;Parent=gene-C9F07_12320;Dbxref=NCBI_GP:TGD86394.1;Name=TGD86394.1;end_range=436,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457000.1;locus_tag=C9F07_12320;partial=true;product=phosphate acetyltransferase;protein_id=TGD86394.1;transl_table=11 ##sequence-region PYKI01000146.1 1 436 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000146.1 Genbank region 1 436 . + . ID=PYKI01000146.1:1..436;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000146.1 Genbank gene 1 436 . + . ID=gene-C9F07_00985;Name=C9F07_00985;end_range=436,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00985;partial=true;start_range=.,1 PYKI01000146.1 Protein Homology CDS 1 436 . + 1 ID=cds-TGE30077.1;Parent=gene-C9F07_00985;Dbxref=NCBI_GP:TGE30077.1;Name=TGE30077.1;end_range=436,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=C9F07_00985;partial=true;product=hypothetical protein;protein_id=TGE30077.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000817.1 1 435 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000817.1 Genbank region 1 435 . + . ID=PYKI01000817.1:1..435;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000817.1 Genbank pseudogene 75 389 . - . ID=gene-C9F07_07395;Name=C9F07_07395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07395;pseudo=true PYKI01000817.1 Protein Homology CDS 75 389 . - 0 ID=cds-C9F07_07395;Parent=gene-C9F07_07395;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007776650.1;locus_tag=C9F07_07395;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;pseudo=true;transl_table=11 ##sequence-region PYKI01002924.1 1 435 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002924.1 Genbank region 1 435 . + . ID=PYKI01002924.1:1..435;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002924.1 Genbank gene 1 212 . + . ID=gene-C9F07_29315;Name=C9F07_29315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29315;partial=true;start_range=.,1 PYKI01002924.1 Protein Homology CDS 1 212 . + 2 ID=cds-TGD43104.1;Parent=gene-C9F07_29315;Dbxref=NCBI_GP:TGD43104.1;Name=TGD43104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458159.1;locus_tag=C9F07_29315;partial=true;product=hypothetical protein;protein_id=TGD43104.1;start_range=.,1;transl_table=11 PYKI01002924.1 Genbank gene 272 435 . - . ID=gene-C9F07_29320;Name=C9F07_29320;end_range=435,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29320;partial=true PYKI01002924.1 Protein Homology CDS 272 435 . - 2 ID=cds-TGD43105.1;Parent=gene-C9F07_29320;Dbxref=NCBI_GP:TGD43105.1;Name=TGD43105.1;end_range=435,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458160.1;locus_tag=C9F07_29320;partial=true;product=6-phospho-beta-glucosidase;protein_id=TGD43105.1;transl_table=11 ##sequence-region PYKI01001679.1 1 435 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001679.1 Genbank region 1 435 . + . ID=PYKI01001679.1:1..435;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001679.1 Genbank gene 1 435 . + . ID=gene-C9F07_16060;Name=lolD;end_range=435,.;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=C9F07_16060;partial=true;start_range=.,1 PYKI01001679.1 Protein Homology CDS 1 435 . + 1 ID=cds-TGD69746.1;Parent=gene-C9F07_16060;Dbxref=NCBI_GP:TGD69746.1;Name=TGD69746.1;Note=outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone;end_range=435,.;gbkey=CDS;gene=lolD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455710.1;locus_tag=C9F07_16060;partial=true;product=lipoprotein-releasing system ATP-binding protein LolD;protein_id=TGD69746.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000089.1 1 434 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000089.1 Genbank region 1 434 . + . ID=PYKI01000089.1:1..434;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000089.1 Genbank pseudogene 1 118 . + . ID=gene-C9F07_00575;Name=C9F07_00575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00575;pseudo=true PYKI01000089.1 Protein Homology CDS 1 118 . + 0 ID=cds-C9F07_00575;Parent=gene-C9F07_00575;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611500.1;locus_tag=C9F07_00575;product=IS3 family transposase;pseudo=true;transl_table=11 PYKI01000089.1 Genbank gene 158 434 . - . ID=gene-C9F07_00580;Name=C9F07_00580;end_range=434,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00580;partial=true PYKI01000089.1 Protein Homology CDS 158 434 . - 1 ID=cds-TGE30145.1;Parent=gene-C9F07_00580;Dbxref=NCBI_GP:TGE30145.1;Name=TGE30145.1;end_range=434,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006688154.1;locus_tag=C9F07_00580;partial=true;product=AAA family ATPase;protein_id=TGE30145.1;transl_table=11 ##sequence-region PYKI01002017.1 1 434 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002017.1 Genbank region 1 434 . + . ID=PYKI01002017.1:1..434;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002017.1 Genbank gene 1 434 . + . ID=gene-C9F07_19460;Name=mglC;end_range=434,.;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=C9F07_19460;partial=true;start_range=.,1 PYKI01002017.1 Protein Homology CDS 1 434 . + 0 ID=cds-TGD60085.1;Parent=gene-C9F07_19460;Dbxref=NCBI_GP:TGD60085.1;Name=TGD60085.1;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;end_range=434,.;gbkey=CDS;gene=mglC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=C9F07_19460;partial=true;product=beta-methylgalactoside transporter permease;protein_id=TGD60085.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001082.1 1 3023 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001082.1 Genbank region 1 3023 . + . ID=PYKI01001082.1:1..3023;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001082.1 Genbank gene 1 420 . + . ID=gene-C9F07_10050;Name=C9F07_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10050;partial=true;start_range=.,1 PYKI01001082.1 Protein Homology CDS 1 420 . + 0 ID=cds-TGD95661.1;Parent=gene-C9F07_10050;Dbxref=NCBI_GP:TGD95661.1;Name=TGD95661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784958.1;locus_tag=C9F07_10050;partial=true;product=formyltetrahydrofolate deformylase;protein_id=TGD95661.1;start_range=.,1;transl_table=11 PYKI01001082.1 Genbank gene 590 730 . + . ID=gene-C9F07_10055;Name=C9F07_10055;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F07_10055 PYKI01001082.1 cmsearch ncRNA 590 730 . + . ID=rna-C9F07_10055;Parent=gene-C9F07_10055;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_10055;product=RtT sRNA PYKI01001082.1 cmsearch exon 590 730 . + . ID=exon-C9F07_10055-1;Parent=rna-C9F07_10055;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_10055;product=RtT sRNA PYKI01001082.1 Genbank gene 761 845 . + . ID=gene-C9F07_10060;Name=C9F07_10060;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_10060 PYKI01001082.1 tRNAscan-SE tRNA 761 845 . + . ID=rna-C9F07_10060;Parent=gene-C9F07_10060;anticodon=(pos:795..797);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_10060;product=tRNA-Tyr PYKI01001082.1 tRNAscan-SE exon 761 845 . + . ID=exon-C9F07_10060-1;Parent=rna-C9F07_10060;anticodon=(pos:795..797);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_10060;product=tRNA-Tyr PYKI01001082.1 Genbank gene 890 1020 . + . ID=gene-C9F07_10065;Name=C9F07_10065;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F07_10065 PYKI01001082.1 cmsearch ncRNA 890 1020 . + . ID=rna-C9F07_10065;Parent=gene-C9F07_10065;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_10065;product=RtT sRNA PYKI01001082.1 cmsearch exon 890 1020 . + . ID=exon-C9F07_10065-1;Parent=rna-C9F07_10065;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_10065;product=RtT sRNA PYKI01001082.1 Genbank gene 1137 1691 . + . ID=gene-C9F07_10070;Name=C9F07_10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10070 PYKI01001082.1 Protein Homology CDS 1137 1691 . + 0 ID=cds-TGD95662.1;Parent=gene-C9F07_10070;Dbxref=NCBI_GP:TGD95662.1;Name=TGD95662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001088482.1;locus_tag=C9F07_10070;product=ATPase;protein_id=TGD95662.1;transl_table=11 PYKI01001082.1 Genbank pseudogene 1838 2272 . - . ID=gene-C9F07_10075;Name=narI;gbkey=Gene;gene=narI;gene_biotype=pseudogene;locus_tag=C9F07_10075;pseudo=true PYKI01001082.1 Protein Homology CDS 1838 2272 . - 0 ID=cds-C9F07_10075;Parent=gene-C9F07_10075;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=narI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455742.1;locus_tag=C9F07_10075;product=respiratory nitrate reductase subunit gamma;pseudo=true;transl_table=11 PYKI01001082.1 Genbank pseudogene 2217 2594 . + . ID=gene-C9F07_10080;Name=C9F07_10080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10080;pseudo=true PYKI01001082.1 Protein Homology CDS 2217 2594 . + 0 ID=cds-C9F07_10080;Parent=gene-C9F07_10080;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=C9F07_10080;product=protein disulfide oxidoreductase;pseudo=true;transl_table=11 PYKI01001082.1 Genbank gene 2769 3023 . + . ID=gene-C9F07_10085;Name=C9F07_10085;end_range=3023,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10085;partial=true PYKI01001082.1 Protein Homology CDS 2769 3023 . + 0 ID=cds-TGD95663.1;Parent=gene-C9F07_10085;Dbxref=NCBI_GP:TGD95663.1;Name=TGD95663.1;end_range=3023,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=C9F07_10085;partial=true;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=TGD95663.1;transl_table=11 ##sequence-region PYKI01003164.1 1 434 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003164.1 Genbank region 1 434 . + . ID=PYKI01003164.1:1..434;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003164.1 Genbank pseudogene 15 434 . + . ID=gene-C9F07_31760;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=pseudogene;locus_tag=C9F07_31760;pseudo=true PYKI01003164.1 Protein Homology CDS 15 434 . + 0 ID=cds-C9F07_31760;Parent=gene-C9F07_31760;Note=part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=cpxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457993.1;locus_tag=C9F07_31760;product=two-component system sensor histidine kinase CpxA;pseudo=true;transl_table=11 ##sequence-region PYKI01001110.1 1 433 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001110.1 Genbank region 1 433 . + . ID=PYKI01001110.1:1..433;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001110.1 Genbank gene 1 262 . - . ID=gene-C9F07_10350;Name=C9F07_10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10350;partial=true;start_range=.,1 PYKI01001110.1 Protein Homology CDS 1 262 . - 0 ID=cds-TGD95088.1;Parent=gene-C9F07_10350;Dbxref=NCBI_GP:TGD95088.1;Name=TGD95088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459831.1;locus_tag=C9F07_10350;partial=true;product=CoA ester lyase;protein_id=TGD95088.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001647.1 1 432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001647.1 Genbank region 1 432 . + . ID=PYKI01001647.1:1..432;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001647.1 Genbank gene 1 432 . - . ID=gene-C9F07_15735;Name=C9F07_15735;end_range=432,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15735;partial=true;start_range=.,1 PYKI01001647.1 Protein Homology CDS 1 432 . - 0 ID=cds-TGD70295.1;Parent=gene-C9F07_15735;Dbxref=NCBI_GP:TGD70295.1;Name=TGD70295.1;end_range=432,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=C9F07_15735;partial=true;product=PTS galactitol transporter subunit IIC;protein_id=TGD70295.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000568.1 1 432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000568.1 Genbank region 1 432 . + . ID=PYKI01000568.1:1..432;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000568.1 Genbank gene 1 432 . + . ID=gene-C9F07_04805;Name=C9F07_04805;end_range=432,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04805;partial=true;start_range=.,1 PYKI01000568.1 Protein Homology CDS 1 432 . + 2 ID=cds-TGE14669.1;Parent=gene-C9F07_04805;Dbxref=NCBI_GP:TGE14669.1;Name=TGE14669.1;end_range=432,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456335.1;locus_tag=C9F07_04805;partial=true;product=hypothetical protein;protein_id=TGE14669.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000418.1 1 432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000418.1 Genbank region 1 432 . + . ID=PYKI01000418.1:1..432;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000418.1 Genbank gene 1 94 . + . ID=gene-C9F07_03220;Name=C9F07_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03220;partial=true;start_range=.,1 PYKI01000418.1 Protein Homology CDS 1 94 . + 1 ID=cds-TGE20931.1;Parent=gene-C9F07_03220;Dbxref=NCBI_GP:TGE20931.1;Name=TGE20931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456096.1;locus_tag=C9F07_03220;partial=true;product=ribonuclease T;protein_id=TGE20931.1;start_range=.,1;transl_table=11 PYKI01000418.1 Genbank gene 172 432 . - . ID=gene-C9F07_03225;Name=C9F07_03225;end_range=432,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03225;partial=true PYKI01000418.1 Protein Homology CDS 172 432 . - 0 ID=cds-TGE20932.1;Parent=gene-C9F07_03225;Dbxref=NCBI_GP:TGE20932.1;Name=TGE20932.1;end_range=432,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456097.1;locus_tag=C9F07_03225;partial=true;product=glutaredoxin;protein_id=TGE20932.1;transl_table=11 ##sequence-region PYKI01002061.1 1 432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002061.1 Genbank region 1 432 . + . ID=PYKI01002061.1:1..432;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002061.1 Genbank pseudogene 1 369 . + . ID=gene-C9F07_19965;Name=C9F07_19965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19965;pseudo=true PYKI01002061.1 Protein Homology CDS 1 369 . + 0 ID=cds-C9F07_19965;Parent=gene-C9F07_19965;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458552.1;locus_tag=C9F07_19965;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002062.1 1 432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002062.1 Genbank region 1 432 . + . ID=PYKI01002062.1:1..432;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002062.1 Genbank gene 113 432 . + . ID=gene-C9F07_19970;Name=C9F07_19970;end_range=432,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19970;partial=true PYKI01002062.1 Protein Homology CDS 113 432 . + 0 ID=cds-TGD59931.1;Parent=gene-C9F07_19970;Dbxref=NCBI_GP:TGD59931.1;Name=TGD59931.1;end_range=432,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001639972.1;locus_tag=C9F07_19970;partial=true;product=D-threonate kinase;protein_id=TGD59931.1;transl_table=11 ##sequence-region PYKI01002502.1 1 431 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002502.1 Genbank region 1 431 . + . ID=PYKI01002502.1:1..431;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002502.1 Genbank gene 1 161 . - . ID=gene-C9F07_24770;Name=C9F07_24770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24770;partial=true;start_range=.,1 PYKI01002502.1 Protein Homology CDS 1 161 . - 0 ID=cds-TGD50257.1;Parent=gene-C9F07_24770;Dbxref=NCBI_GP:TGD50257.1;Name=TGD50257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=C9F07_24770;partial=true;product=ketose-bisphosphate aldolase;protein_id=TGD50257.1;start_range=.,1;transl_table=11 PYKI01002502.1 Genbank pseudogene 183 353 . - . ID=gene-C9F07_24775;Name=C9F07_24775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24775;pseudo=true PYKI01002502.1 Protein Homology CDS 183 353 . - 0 ID=cds-C9F07_24775;Parent=gene-C9F07_24775;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310510.1;locus_tag=C9F07_24775;product=alcohol dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01000662.1 1 431 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000662.1 Genbank region 1 431 . + . ID=PYKI01000662.1:1..431;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000662.1 Genbank gene 1 226 . - . ID=gene-C9F07_05765;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=C9F07_05765;partial=true;start_range=.,1 PYKI01000662.1 Protein Homology CDS 1 226 . - 0 ID=cds-TGE11917.1;Parent=gene-C9F07_05765;Dbxref=NCBI_GP:TGE11917.1;Name=TGE11917.1;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;gbkey=CDS;gene=dppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458292.1;locus_tag=C9F07_05765;partial=true;product=dipeptide ABC transporter ATP-binding protein DppD;protein_id=TGE11917.1;start_range=.,1;transl_table=11 PYKI01000662.1 Genbank gene 237 365 . - . ID=gene-C9F07_05770;Name=C9F07_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05770 PYKI01000662.1 Protein Homology CDS 237 365 . - 0 ID=cds-TGE11918.1;Parent=gene-C9F07_05770;Dbxref=NCBI_GP:TGE11918.1;Name=TGE11918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001391719.1;locus_tag=C9F07_05770;product=peptide ABC transporter permease;protein_id=TGE11918.1;transl_table=11 ##sequence-region PYKI01000340.1 1 3021 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000340.1 Genbank region 1 3021 . + . ID=PYKI01000340.1:1..3021;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000340.1 Genbank gene 108 181 . + . ID=gene-C9F07_02500;Name=C9F07_02500;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_02500 PYKI01000340.1 tRNAscan-SE tRNA 108 181 . + . ID=rna-C9F07_02500;Parent=gene-C9F07_02500;anticodon=(pos:140..142);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_02500;product=tRNA-Cys PYKI01000340.1 tRNAscan-SE exon 108 181 . + . ID=exon-C9F07_02500-1;Parent=rna-C9F07_02500;anticodon=(pos:140..142);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_02500;product=tRNA-Cys PYKI01000340.1 Genbank gene 193 279 . + . ID=gene-C9F07_02505;Name=C9F07_02505;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_02505 PYKI01000340.1 tRNAscan-SE tRNA 193 279 . + . ID=rna-C9F07_02505;Parent=gene-C9F07_02505;anticodon=(pos:227..229);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_02505;product=tRNA-Leu PYKI01000340.1 tRNAscan-SE exon 193 279 . + . ID=exon-C9F07_02505-1;Parent=rna-C9F07_02505;anticodon=(pos:227..229);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_02505;product=tRNA-Leu PYKI01000340.1 Genbank gene 577 861 . + . ID=gene-C9F07_02510;Name=C9F07_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02510 PYKI01000340.1 Protein Homology CDS 577 861 . + 0 ID=cds-TGE26834.1;Parent=gene-C9F07_02510;Dbxref=NCBI_GP:TGE26834.1;Name=TGE26834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537326.1;locus_tag=C9F07_02510;product=hypothetical protein;protein_id=TGE26834.1;transl_table=11 PYKI01000340.1 Genbank gene 1075 2514 . + . ID=gene-C9F07_02515;Name=C9F07_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02515 PYKI01000340.1 Protein Homology CDS 1075 2514 . + 0 ID=cds-TGE26835.1;Parent=gene-C9F07_02515;Dbxref=NCBI_GP:TGE26835.1;Name=TGE26835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=C9F07_02515;product=cell wall hydrolase;protein_id=TGE26835.1;transl_table=11 PYKI01000340.1 Genbank gene 2727 3021 . + . ID=gene-C9F07_02520;Name=C9F07_02520;end_range=3021,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02520;partial=true PYKI01000340.1 Protein Homology CDS 2727 3021 . + 0 ID=cds-TGE26836.1;Parent=gene-C9F07_02520;Dbxref=NCBI_GP:TGE26836.1;Name=TGE26836.1;end_range=3021,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=C9F07_02520;partial=true;product=glucose-6-phosphate dehydrogenase;protein_id=TGE26836.1;transl_table=11 ##sequence-region PYKI01000085.1 1 431 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000085.1 Genbank region 1 431 . + . ID=PYKI01000085.1:1..431;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000085.1 Genbank gene 210 431 . - . ID=gene-C9F07_00535;Name=C9F07_00535;end_range=431,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00535;partial=true PYKI01000085.1 Protein Homology CDS 210 431 . - 0 ID=cds-TGE30152.1;Parent=gene-C9F07_00535;Dbxref=NCBI_GP:TGE30152.1;Name=TGE30152.1;end_range=431,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=C9F07_00535;partial=true;product=hypothetical protein;protein_id=TGE30152.1;transl_table=11 ##sequence-region PYKI01000659.1 1 431 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000659.1 Genbank region 1 431 . + . ID=PYKI01000659.1:1..431;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000659.1 Genbank gene 1 431 . + . ID=gene-C9F07_05735;Name=C9F07_05735;end_range=431,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05735;partial=true;start_range=.,1 PYKI01000659.1 Protein Homology CDS 1 431 . + 0 ID=cds-TGE12084.1;Parent=gene-C9F07_05735;Dbxref=NCBI_GP:TGE12084.1;Name=TGE12084.1;end_range=431,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456815.1;locus_tag=C9F07_05735;partial=true;product=two-component system sensor histidine kinase/response regulator;protein_id=TGE12084.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002860.1 1 428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002860.1 Genbank region 1 428 . + . ID=PYKI01002860.1:1..428;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002860.1 Genbank gene 106 428 . + . ID=gene-C9F07_28655;Name=C9F07_28655;end_range=428,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28655;partial=true PYKI01002860.1 Protein Homology CDS 106 428 . + 0 ID=cds-TGD44974.1;Parent=gene-C9F07_28655;Dbxref=NCBI_GP:TGD44974.1;Name=TGD44974.1;end_range=428,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=C9F07_28655;partial=true;product=class II glutamine amidotransferase;protein_id=TGD44974.1;transl_table=11 ##sequence-region PYKI01000104.1 1 428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000104.1 Genbank region 1 428 . + . ID=PYKI01000104.1:1..428;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01001231.1 1 428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001231.1 Genbank region 1 428 . + . ID=PYKI01001231.1:1..428;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001231.1 Genbank gene 1 363 . - . ID=gene-C9F07_11515;Name=C9F07_11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11515;partial=true;start_range=.,1 PYKI01001231.1 Protein Homology CDS 1 363 . - 0 ID=cds-TGD91031.1;Parent=gene-C9F07_11515;Dbxref=NCBI_GP:TGD91031.1;Name=TGD91031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454686.1;locus_tag=C9F07_11515;partial=true;product=nitrogen fixation protein FixB;protein_id=TGD91031.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003058.1 1 428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003058.1 Genbank region 1 428 . + . ID=PYKI01003058.1:1..428;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003058.1 Genbank gene 72 428 . + . ID=gene-C9F07_30675;Name=C9F07_30675;end_range=428,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30675;partial=true PYKI01003058.1 Protein Homology CDS 72 428 . + 0 ID=cds-TGD40973.1;Parent=gene-C9F07_30675;Dbxref=NCBI_GP:TGD40973.1;Name=TGD40973.1;Note=in Escherichia coli this protein is involved in flagellar function;end_range=428,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=C9F07_30675;partial=true;product=cyclic-guanylate-specific phosphodiesterase;protein_id=TGD40973.1;transl_table=11 ##sequence-region PYKI01002372.1 1 428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002372.1 Genbank region 1 428 . + . ID=PYKI01002372.1:1..428;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002372.1 Genbank pseudogene 143 370 . + . ID=gene-C9F07_23315;Name=C9F07_23315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23315;pseudo=true PYKI01002372.1 Protein Homology CDS 143 370 . + 0 ID=cds-C9F07_23315;Parent=gene-C9F07_23315;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456765.1;locus_tag=C9F07_23315;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01000723.1 1 428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000723.1 Genbank region 1 428 . + . ID=PYKI01000723.1:1..428;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000723.1 Genbank pseudogene 33 428 . - . ID=gene-C9F07_06355;Name=C9F07_06355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06355;pseudo=true PYKI01000723.1 Protein Homology CDS 33 428 . - 0 ID=cds-C9F07_06355;Parent=gene-C9F07_06355;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457397.1;locus_tag=C9F07_06355;product=phosphotransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01000373.1 1 427 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000373.1 Genbank region 1 427 . + . ID=PYKI01000373.1:1..427;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000373.1 Genbank gene 1 427 . - . ID=gene-C9F07_02825;Name=C9F07_02825;end_range=427,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02825;partial=true;start_range=.,1 PYKI01000373.1 Protein Homology CDS 1 427 . - 0 ID=cds-TGE23182.1;Parent=gene-C9F07_02825;Dbxref=NCBI_GP:TGE23182.1;Name=TGE23182.1;end_range=427,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=C9F07_02825;partial=true;product=cellulose biosynthesis protein BcsC;protein_id=TGE23182.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001257.1 1 3017 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001257.1 Genbank region 1 3017 . + . ID=PYKI01001257.1:1..3017;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001257.1 Genbank gene 1 3017 . + . ID=gene-C9F07_11735;Name=bapA;end_range=3017,.;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=C9F07_11735;partial=true;start_range=.,1 PYKI01001257.1 Protein Homology CDS 1 3017 . + 0 ID=cds-TGD89511.1;Parent=gene-C9F07_11735;Dbxref=NCBI_GP:TGD89511.1;Name=TGD89511.1;end_range=3017,.;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457158.1;locus_tag=C9F07_11735;partial=true;product=biofilm-associated protein BapA;protein_id=TGD89511.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001814.1 1 427 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001814.1 Genbank region 1 427 . + . ID=PYKI01001814.1:1..427;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001814.1 Genbank gene 1 427 . - . ID=gene-C9F07_17440;Name=C9F07_17440;end_range=427,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17440;partial=true;start_range=.,1 PYKI01001814.1 Protein Homology CDS 1 427 . - 2 ID=cds-TGD64981.1;Parent=gene-C9F07_17440;Dbxref=NCBI_GP:TGD64981.1;Name=TGD64981.1;end_range=427,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455312.1;locus_tag=C9F07_17440;partial=true;product=iron-siderophore ABC transporter permease;protein_id=TGD64981.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001668.1 1 426 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001668.1 Genbank region 1 426 . + . ID=PYKI01001668.1:1..426;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001668.1 Genbank pseudogene 82 426 . - . ID=gene-C9F07_15925;Name=C9F07_15925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15925;pseudo=true PYKI01001668.1 Protein Homology CDS 82 426 . - 0 ID=cds-C9F07_15925;Parent=gene-C9F07_15925;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=C9F07_15925;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001189.1 1 426 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001189.1 Genbank region 1 426 . + . ID=PYKI01001189.1:1..426;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001189.1 Genbank gene 1 426 . - . ID=gene-C9F07_11130;Name=rsmD;end_range=426,.;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=C9F07_11130;partial=true;start_range=.,1 PYKI01001189.1 Protein Homology CDS 1 426 . - 1 ID=cds-TGD92004.1;Parent=gene-C9F07_11130;Dbxref=NCBI_GP:TGD92004.1;Name=TGD92004.1;end_range=426,.;gbkey=CDS;gene=rsmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458349.1;locus_tag=C9F07_11130;partial=true;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=TGD92004.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001847.1 1 426 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001847.1 Genbank region 1 426 . + . ID=PYKI01001847.1:1..426;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001847.1 Genbank pseudogene 1 187 . + . ID=gene-C9F07_17760;Name=C9F07_17760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17760;pseudo=true PYKI01001847.1 Protein Homology CDS 1 187 . + 1 ID=cds-C9F07_17760;Parent=gene-C9F07_17760;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313032.1;locus_tag=C9F07_17760;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001847.1 Genbank pseudogene 207 426 . + . ID=gene-C9F07_17765;Name=C9F07_17765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17765;pseudo=true PYKI01001847.1 Protein Homology CDS 207 426 . + 0 ID=cds-C9F07_17765;Parent=gene-C9F07_17765;Note=catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=C9F07_17765;product=23S rRNA pseudouridine(2604) synthase RluF;pseudo=true;transl_table=11 ##sequence-region PYKI01002647.1 1 425 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002647.1 Genbank region 1 425 . + . ID=PYKI01002647.1:1..425;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002647.1 Genbank gene 1 117 . - . ID=gene-C9F07_26360;Name=C9F07_26360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26360;partial=true;start_range=.,1 PYKI01002647.1 Protein Homology CDS 1 117 . - 0 ID=cds-TGD49380.1;Parent=gene-C9F07_26360;Dbxref=NCBI_GP:TGD49380.1;Name=TGD49380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455923.1;locus_tag=C9F07_26360;partial=true;product=alcohol dehydrogenase AdhP;protein_id=TGD49380.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001060.1 1 425 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001060.1 Genbank region 1 425 . + . ID=PYKI01001060.1:1..425;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001060.1 Genbank gene 1 425 . + . ID=gene-C9F07_09780;Name=C9F07_09780;end_range=425,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09780;partial=true;start_range=.,1 PYKI01001060.1 Protein Homology CDS 1 425 . + 2 ID=cds-TGD96226.1;Parent=gene-C9F07_09780;Dbxref=NCBI_GP:TGD96226.1;Name=TGD96226.1;end_range=425,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=C9F07_09780;partial=true;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=TGD96226.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002550.1 1 425 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002550.1 Genbank region 1 425 . + . ID=PYKI01002550.1:1..425;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002550.1 Genbank pseudogene 23 391 . - . ID=gene-C9F07_25320;Name=C9F07_25320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25320;pseudo=true PYKI01002550.1 Protein Homology CDS 23 391 . - 0 ID=cds-C9F07_25320;Parent=gene-C9F07_25320;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=C9F07_25320;product=ATP-dependent RNA helicase HrpA;pseudo=true;transl_table=11 ##sequence-region PYKI01003311.1 1 425 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003311.1 Genbank region 1 425 . + . ID=PYKI01003311.1:1..425;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003311.1 Genbank gene 1 425 . - . ID=gene-C9F07_33305;Name=cbiH;end_range=425,.;gbkey=Gene;gene=cbiH;gene_biotype=protein_coding;locus_tag=C9F07_33305;partial=true;start_range=.,1 PYKI01003311.1 Protein Homology CDS 1 425 . - 1 ID=cds-TGD36006.1;Parent=gene-C9F07_33305;Dbxref=NCBI_GP:TGD36006.1;Name=TGD36006.1;Note=catalyzes the formation of cobalt-precorrin-4 from cobalt-precorrin-3B;end_range=425,.;gbkey=CDS;gene=cbiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456578.1;locus_tag=C9F07_33305;partial=true;product=cobalt-precorrin-3B C(17)-methyltransferase;protein_id=TGD36006.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000289.1 1 425 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000289.1 Genbank region 1 425 . + . ID=PYKI01000289.1:1..425;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000289.1 Genbank pseudogene 1 364 . + . ID=gene-C9F07_01885;Name=C9F07_01885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01885;pseudo=true PYKI01000289.1 Protein Homology CDS 1 364 . + 1 ID=cds-C9F07_01885;Parent=gene-C9F07_01885;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=C9F07_01885;product=peptide ABC transporter substrate-binding protein SapA;pseudo=true;transl_table=11 ##sequence-region PYKI01000637.1 1 3015 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000637.1 Genbank region 1 3015 . + . ID=PYKI01000637.1:1..3015;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000637.1 Genbank gene 1 154 . - . ID=gene-C9F07_05490;Name=C9F07_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05490;partial=true;start_range=.,1 PYKI01000637.1 Protein Homology CDS 1 154 . - 0 ID=cds-TGE12857.1;Parent=gene-C9F07_05490;Dbxref=NCBI_GP:TGE12857.1;Name=TGE12857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=C9F07_05490;partial=true;product=hypothetical protein;protein_id=TGE12857.1;start_range=.,1;transl_table=11 PYKI01000637.1 Genbank gene 187 585 . - . ID=gene-C9F07_05495;Name=C9F07_05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05495 PYKI01000637.1 Protein Homology CDS 187 585 . - 0 ID=cds-TGE12855.1;Parent=gene-C9F07_05495;Dbxref=NCBI_GP:TGE12855.1;Name=TGE12855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455896.1;locus_tag=C9F07_05495;product=D-alanyl-D-alanine dipeptidase;protein_id=TGE12855.1;transl_table=11 PYKI01000637.1 Genbank gene 1101 2051 . + . ID=gene-C9F07_05500;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=protein_coding;locus_tag=C9F07_05500 PYKI01000637.1 Protein Homology CDS 1101 2051 . + 0 ID=cds-TGE12856.1;Parent=gene-C9F07_05500;Dbxref=NCBI_GP:TGE12856.1;Name=TGE12856.1;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001122935.1;locus_tag=C9F07_05500;product=SPI-2 type III secretion system effector SifB;protein_id=TGE12856.1;transl_table=11 PYKI01000637.1 Genbank gene 2324 2554 . + . ID=gene-C9F07_05505;Name=C9F07_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05505 PYKI01000637.1 Protein Homology CDS 2324 2554 . + 0 ID=cds-TGE12858.1;Parent=gene-C9F07_05505;Dbxref=NCBI_GP:TGE12858.1;Name=TGE12858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455894.1;locus_tag=C9F07_05505;product=DUF2554 domain-containing protein;protein_id=TGE12858.1;transl_table=11 PYKI01000637.1 Genbank gene 2555 3015 . - . ID=gene-C9F07_05510;Name=C9F07_05510;end_range=3015,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05510;partial=true PYKI01000637.1 Protein Homology CDS 2555 3015 . - 2 ID=cds-TGE12859.1;Parent=gene-C9F07_05510;Dbxref=NCBI_GP:TGE12859.1;Name=TGE12859.1;end_range=3015,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=C9F07_05510;partial=true;product=hypothetical protein;protein_id=TGE12859.1;transl_table=11 ##sequence-region PYKI01002515.1 1 425 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002515.1 Genbank region 1 425 . + . ID=PYKI01002515.1:1..425;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002515.1 Genbank pseudogene 10 425 . + . ID=gene-C9F07_24920;Name=C9F07_24920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24920;pseudo=true PYKI01002515.1 Protein Homology CDS 10 425 . + 0 ID=cds-C9F07_24920;Parent=gene-C9F07_24920;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001786014.1;locus_tag=C9F07_24920;product=phosphoporin PhoE;pseudo=true;transl_table=11 ##sequence-region PYKI01002846.1 1 425 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002846.1 Genbank region 1 425 . + . ID=PYKI01002846.1:1..425;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002846.1 Genbank pseudogene 1 425 . + . ID=gene-C9F07_28455;Name=C9F07_28455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28455;pseudo=true PYKI01002846.1 Protein Homology CDS 1 425 . + 0 ID=cds-C9F07_28455;Parent=gene-C9F07_28455;Note=P-type%3B involved in magnesium transport into the cytoplasm%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=C9F07_28455;product=magnesium-translocating P-type ATPase;pseudo=true;transl_table=11 ##sequence-region PYKI01002732.1 1 424 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002732.1 Genbank region 1 424 . + . ID=PYKI01002732.1:1..424;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01003145.1 1 424 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003145.1 Genbank region 1 424 . + . ID=PYKI01003145.1:1..424;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003145.1 Genbank gene 1 424 . + . ID=gene-C9F07_31540;Name=C9F07_31540;end_range=424,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31540;partial=true;start_range=.,1 PYKI01003145.1 Protein Homology CDS 1 424 . + 2 ID=cds-TGD38525.1;Parent=gene-C9F07_31540;Dbxref=NCBI_GP:TGD38525.1;Name=TGD38525.1;end_range=424,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=C9F07_31540;partial=true;product=transcriptional regulator;protein_id=TGD38525.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003348.1 1 423 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003348.1 Genbank region 1 423 . + . ID=PYKI01003348.1:1..423;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003348.1 Genbank gene 1 423 . + . ID=gene-C9F07_33700;Name=C9F07_33700;end_range=423,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33700;partial=true;start_range=.,1 PYKI01003348.1 Protein Homology CDS 1 423 . + 0 ID=cds-TGD35038.1;Parent=gene-C9F07_33700;Dbxref=NCBI_GP:TGD35038.1;Name=TGD35038.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock;end_range=423,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456943.1;locus_tag=C9F07_33700;partial=true;product=lipid A biosynthesis palmitoleoyl acyltransferase;protein_id=TGD35038.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003336.1 1 423 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003336.1 Genbank region 1 423 . + . ID=PYKI01003336.1:1..423;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003336.1 Genbank gene 1 364 . + . ID=gene-C9F07_33560;Name=C9F07_33560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33560;partial=true;start_range=.,1 PYKI01003336.1 Protein Homology CDS 1 364 . + 1 ID=cds-TGD35090.1;Parent=gene-C9F07_33560;Dbxref=NCBI_GP:TGD35090.1;Name=TGD35090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457083.1;locus_tag=C9F07_33560;partial=true;product=stationary phase inducible protein CsiE;protein_id=TGD35090.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000225.1 1 423 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000225.1 Genbank region 1 423 . + . ID=PYKI01000225.1:1..423;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000225.1 Genbank gene 1 188 . + . ID=gene-C9F07_01470;Name=C9F07_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01470;partial=true;start_range=.,1 PYKI01000225.1 Protein Homology CDS 1 188 . + 2 ID=cds-TGE27882.1;Parent=gene-C9F07_01470;Dbxref=NCBI_GP:TGE27882.1;Name=TGE27882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458846.1;locus_tag=C9F07_01470;partial=true;product=hypothetical protein;protein_id=TGE27882.1;start_range=.,1;transl_table=11 PYKI01000225.1 Genbank gene 185 423 . + . ID=gene-C9F07_01475;Name=C9F07_01475;end_range=423,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01475;partial=true PYKI01000225.1 Protein Homology CDS 185 423 . + 0 ID=cds-TGE27883.1;Parent=gene-C9F07_01475;Dbxref=NCBI_GP:TGE27883.1;Name=TGE27883.1;end_range=423,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313226.1;locus_tag=C9F07_01475;partial=true;product=hypothetical protein;protein_id=TGE27883.1;transl_table=11 ##sequence-region PYKI01000273.1 1 423 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000273.1 Genbank region 1 423 . + . ID=PYKI01000273.1:1..423;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000273.1 Genbank gene 1 350 . - . ID=gene-C9F07_01765;Name=C9F07_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01765;partial=true;start_range=.,1 PYKI01000273.1 Protein Homology CDS 1 350 . - 0 ID=cds-TGE27838.1;Parent=gene-C9F07_01765;Dbxref=NCBI_GP:TGE27838.1;Name=TGE27838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460823.1;locus_tag=C9F07_01765;partial=true;product=hypothetical protein;protein_id=TGE27838.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001190.1 1 421 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001190.1 Genbank region 1 421 . + . ID=PYKI01001190.1:1..421;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001190.1 Genbank gene 1 421 . + . ID=gene-C9F07_11135;Name=C9F07_11135;end_range=421,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11135;partial=true;start_range=.,1 PYKI01001190.1 Protein Homology CDS 1 421 . + 2 ID=cds-TGD92003.1;Parent=gene-C9F07_11135;Dbxref=NCBI_GP:TGD92003.1;Name=TGD92003.1;end_range=421,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457950.1;locus_tag=C9F07_11135;partial=true;product=multifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase;protein_id=TGD92003.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001325.1 1 421 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001325.1 Genbank region 1 421 . + . ID=PYKI01001325.1:1..421;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01002186.1 1 3013 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002186.1 Genbank region 1 3013 . + . ID=PYKI01002186.1:1..3013;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002186.1 Genbank gene 1 289 . - . ID=gene-C9F07_21235;Name=C9F07_21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21235;partial=true;start_range=.,1 PYKI01002186.1 Protein Homology CDS 1 289 . - 0 ID=cds-TGD56627.1;Parent=gene-C9F07_21235;Dbxref=NCBI_GP:TGD56627.1;Name=TGD56627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=C9F07_21235;partial=true;product=hypothetical protein;protein_id=TGD56627.1;start_range=.,1;transl_table=11 PYKI01002186.1 Genbank gene 459 1880 . + . ID=gene-C9F07_21240;Name=C9F07_21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21240 PYKI01002186.1 Protein Homology CDS 459 1880 . + 0 ID=cds-TGD56628.1;Parent=gene-C9F07_21240;Dbxref=NCBI_GP:TGD56628.1;Name=TGD56628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454811.1;locus_tag=C9F07_21240;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=TGD56628.1;transl_table=11 PYKI01002186.1 Genbank gene 1962 2306 . + . ID=gene-C9F07_21245;Name=C9F07_21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21245 PYKI01002186.1 Protein Homology CDS 1962 2306 . + 0 ID=cds-TGD56629.1;Parent=gene-C9F07_21245;Dbxref=NCBI_GP:TGD56629.1;Name=TGD56629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=C9F07_21245;product=iron-sulfur cluster insertion protein ErpA;protein_id=TGD56629.1;transl_table=11 PYKI01002186.1 Genbank gene 2407 2991 . - . ID=gene-C9F07_21250;Name=C9F07_21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21250 PYKI01002186.1 Protein Homology CDS 2407 2991 . - 0 ID=cds-TGD56630.1;Parent=gene-C9F07_21250;Dbxref=NCBI_GP:TGD56630.1;Name=TGD56630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454813.1;locus_tag=C9F07_21250;product=hypothetical protein;protein_id=TGD56630.1;transl_table=11 ##sequence-region PYKI01002123.1 1 421 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002123.1 Genbank region 1 421 . + . ID=PYKI01002123.1:1..421;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002123.1 Genbank pseudogene 81 335 . - . ID=gene-C9F07_20545;Name=C9F07_20545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20545;pseudo=true PYKI01002123.1 Protein Homology CDS 81 335 . - 0 ID=cds-C9F07_20545;Parent=gene-C9F07_20545;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454665.1;locus_tag=C9F07_20545;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000829.1 1 420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000829.1 Genbank region 1 420 . + . ID=PYKI01000829.1:1..420;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000829.1 Genbank gene 215 420 . + . ID=gene-C9F07_07565;Name=C9F07_07565;end_range=420,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07565;partial=true PYKI01000829.1 Protein Homology CDS 215 420 . + 0 ID=cds-TGE07228.1;Parent=gene-C9F07_07565;Dbxref=NCBI_GP:TGE07228.1;Name=TGE07228.1;end_range=420,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008737832.1;locus_tag=C9F07_07565;partial=true;product=hypothetical protein;protein_id=TGE07228.1;transl_table=11 ##sequence-region PYKI01001254.1 1 420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001254.1 Genbank region 1 420 . + . ID=PYKI01001254.1:1..420;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001254.1 Genbank pseudogene 1 360 . + . ID=gene-C9F07_11705;Name=C9F07_11705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11705;pseudo=true PYKI01001254.1 Protein Homology CDS 1 360 . + 0 ID=cds-C9F07_11705;Parent=gene-C9F07_11705;Note=catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455013.1;locus_tag=C9F07_11705;product=thiamine-phosphate kinase;pseudo=true;transl_table=11 ##sequence-region PYKI01000576.1 1 420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000576.1 Genbank region 1 420 . + . ID=PYKI01000576.1:1..420;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000576.1 Genbank gene 1 420 . + . ID=gene-C9F07_04860;Name=livM;end_range=420,.;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=C9F07_04860;partial=true;start_range=.,1 PYKI01000576.1 Protein Homology CDS 1 420 . + 0 ID=cds-TGE14492.1;Parent=gene-C9F07_04860;Dbxref=NCBI_GP:TGE14492.1;Name=TGE14492.1;Note=Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;end_range=420,.;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458358.1;locus_tag=C9F07_04860;partial=true;product=high-affinity branched-chain amino acid ABC transporter permease LivM;protein_id=TGE14492.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000573.1 1 420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000573.1 Genbank region 1 420 . + . ID=PYKI01000573.1:1..420;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000573.1 Genbank gene 1 420 . + . ID=gene-C9F07_04845;Name=C9F07_04845;end_range=420,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04845;partial=true;start_range=.,1 PYKI01000573.1 Protein Homology CDS 1 420 . + 1 ID=cds-TGE14545.1;Parent=gene-C9F07_04845;Dbxref=NCBI_GP:TGE14545.1;Name=TGE14545.1;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;end_range=420,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=C9F07_04845;partial=true;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=TGE14545.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000449.1 1 419 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000449.1 Genbank region 1 419 . + . ID=PYKI01000449.1:1..419;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000449.1 Genbank gene 1 290 . - . ID=gene-C9F07_03465;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=C9F07_03465;partial=true;start_range=.,1 PYKI01000449.1 Protein Homology CDS 1 290 . - 0 ID=cds-TGE19982.1;Parent=gene-C9F07_03465;Dbxref=NCBI_GP:TGE19982.1;Name=TGE19982.1;Note=with pduCD catalyzes the formation of propionaldehyde from 1%2C2-propanediol;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456592.1;locus_tag=C9F07_03465;partial=true;product=propanediol dehydratase small subunit PduE;protein_id=TGE19982.1;start_range=.,1;transl_table=11 PYKI01000449.1 Genbank gene 305 419 . - . ID=gene-C9F07_03470;Name=pduD;end_range=419,.;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=C9F07_03470;partial=true PYKI01000449.1 Protein Homology CDS 305 419 . - 1 ID=cds-TGE19983.1;Parent=gene-C9F07_03470;Dbxref=NCBI_GP:TGE19983.1;Name=TGE19983.1;Note=with PduCE catalyzes the formation of propionaldehyde from 1%2C2-propanediol;end_range=419,.;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=C9F07_03470;partial=true;product=propanediol dehydratase;protein_id=TGE19983.1;transl_table=11 ##sequence-region PYKI01000648.1 1 419 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000648.1 Genbank region 1 419 . + . ID=PYKI01000648.1:1..419;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000648.1 Genbank gene 1 277 . - . ID=gene-C9F07_05605;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=C9F07_05605;partial=true;start_range=.,1 PYKI01000648.1 Protein Homology CDS 1 277 . - 0 ID=cds-TGE12434.1;Parent=gene-C9F07_05605;Dbxref=NCBI_GP:TGE12434.1;Name=TGE12434.1;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;gbkey=CDS;gene=xseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457046.1;locus_tag=C9F07_05605;partial=true;product=exodeoxyribonuclease VII large subunit;protein_id=TGE12434.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002773.1 1 419 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002773.1 Genbank region 1 419 . + . ID=PYKI01002773.1:1..419;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002773.1 Genbank pseudogene 1 342 . - . ID=gene-C9F07_27710;Name=C9F07_27710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27710;pseudo=true PYKI01002773.1 Protein Homology CDS 1 342 . - 0 ID=cds-C9F07_27710;Parent=gene-C9F07_27710;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455908.1;locus_tag=C9F07_27710;product=transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01003396.1 1 419 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003396.1 Genbank region 1 419 . + . ID=PYKI01003396.1:1..419;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003396.1 Genbank gene 1 419 . + . ID=gene-C9F07_34150;Name=C9F07_34150;end_range=419,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34150;partial=true;start_range=.,1 PYKI01003396.1 Protein Homology CDS 1 419 . + 0 ID=cds-TGD34015.1;Parent=gene-C9F07_34150;Dbxref=NCBI_GP:TGD34015.1;Name=TGD34015.1;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme;end_range=419,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457592.1;locus_tag=C9F07_34150;partial=true;product=bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase;protein_id=TGD34015.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002582.1 1 419 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002582.1 Genbank region 1 419 . + . ID=PYKI01002582.1:1..419;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002582.1 Genbank pseudogene 1 391 . + . ID=gene-C9F07_25630;Name=C9F07_25630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25630;pseudo=true PYKI01002582.1 Protein Homology CDS 1 391 . + 1 ID=cds-C9F07_25630;Parent=gene-C9F07_25630;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455049.1;locus_tag=C9F07_25630;product=peptidylprolyl isomerase;pseudo=true;transl_table=11 ##sequence-region PYKI01002190.1 1 419 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002190.1 Genbank region 1 419 . + . ID=PYKI01002190.1:1..419;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002190.1 Genbank gene 1 419 . - . ID=gene-C9F07_21305;Name=C9F07_21305;end_range=419,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21305;partial=true;start_range=.,1 PYKI01002190.1 Protein Homology CDS 1 419 . - 0 ID=cds-TGD56612.1;Parent=gene-C9F07_21305;Dbxref=NCBI_GP:TGD56612.1;Name=TGD56612.1;end_range=419,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455462.1;locus_tag=C9F07_21305;partial=true;product=30S ribosomal protein S12 methylthiotransferase accessory protein YcaO;protein_id=TGD56612.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001925.1 1 418 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001925.1 Genbank region 1 418 . + . ID=PYKI01001925.1:1..418;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001925.1 Genbank pseudogene 28 234 . - . ID=gene-C9F07_18565;Name=C9F07_18565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18565;pseudo=true PYKI01001925.1 Protein Homology CDS 28 234 . - 0 ID=cds-C9F07_18565;Parent=gene-C9F07_18565;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458056.1;locus_tag=C9F07_18565;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01001897.1 1 417 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001897.1 Genbank region 1 417 . + . ID=PYKI01001897.1:1..417;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001897.1 Genbank gene 132 417 . - . ID=gene-C9F07_18290;Name=C9F07_18290;end_range=417,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18290;partial=true PYKI01001897.1 Protein Homology CDS 132 417 . - 1 ID=cds-TGD61633.1;Parent=gene-C9F07_18290;Dbxref=NCBI_GP:TGD61633.1;Name=TGD61633.1;end_range=417,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457711.1;locus_tag=C9F07_18290;partial=true;product=hypothetical protein;protein_id=TGD61633.1;transl_table=11 ##sequence-region PYKI01002580.1 1 417 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002580.1 Genbank region 1 417 . + . ID=PYKI01002580.1:1..417;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002580.1 Genbank gene 1 198 . + . ID=gene-C9F07_25615;Name=C9F07_25615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25615;partial=true;start_range=.,1 PYKI01002580.1 Protein Homology CDS 1 198 . + 0 ID=cds-TGD49738.1;Parent=gene-C9F07_25615;Dbxref=NCBI_GP:TGD49738.1;Name=TGD49738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456241.1;locus_tag=C9F07_25615;partial=true;product=leucine efflux protein LeuE;protein_id=TGD49738.1;start_range=.,1;transl_table=11 PYKI01002580.1 Genbank gene 214 399 . - . ID=gene-C9F07_25620;Name=C9F07_25620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25620 PYKI01002580.1 Protein Homology CDS 214 399 . - 0 ID=cds-TGD49739.1;Parent=gene-C9F07_25620;Dbxref=NCBI_GP:TGD49739.1;Name=TGD49739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001520540.1;locus_tag=C9F07_25620;product=hypothetical protein;protein_id=TGD49739.1;transl_table=11 ##sequence-region PYKI01001885.1 1 417 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001885.1 Genbank region 1 417 . + . ID=PYKI01001885.1:1..417;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001885.1 Genbank gene 1 313 . - . ID=gene-C9F07_18205;Name=C9F07_18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18205;partial=true;start_range=.,1 PYKI01001885.1 Protein Homology CDS 1 313 . - 0 ID=cds-TGD62034.1;Parent=gene-C9F07_18205;Dbxref=NCBI_GP:TGD62034.1;Name=TGD62034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456848.1;locus_tag=C9F07_18205;partial=true;product=o-succinylbenzoate--CoA ligase;protein_id=TGD62034.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000857.1 1 416 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000857.1 Genbank region 1 416 . + . ID=PYKI01000857.1:1..416;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000857.1 Genbank gene 106 381 . - . ID=gene-C9F07_07845;Name=C9F07_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07845 PYKI01000857.1 Protein Homology CDS 106 381 . - 0 ID=cds-TGE05871.1;Parent=gene-C9F07_07845;Dbxref=NCBI_GP:TGE05871.1;Name=TGE05871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210125.1;locus_tag=C9F07_07845;product=DNA-invertase hin;protein_id=TGE05871.1;transl_table=11 ##sequence-region PYKI01000581.1 1 416 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000581.1 Genbank region 1 416 . + . ID=PYKI01000581.1:1..416;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000581.1 Genbank gene 1 127 . - . ID=gene-C9F07_04915;Name=C9F07_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04915;partial=true;start_range=.,1 PYKI01000581.1 Protein Homology CDS 1 127 . - 0 ID=cds-TGE14372.1;Parent=gene-C9F07_04915;Dbxref=NCBI_GP:TGE14372.1;Name=TGE14372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455394.1;locus_tag=C9F07_04915;partial=true;product=HAD family hydrolase;protein_id=TGE14372.1;start_range=.,1;transl_table=11 PYKI01000581.1 Genbank pseudogene 124 416 . - . ID=gene-C9F07_04920;Name=C9F07_04920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04920;pseudo=true PYKI01000581.1 Protein Homology CDS 124 416 . - 2 ID=cds-C9F07_04920;Parent=gene-C9F07_04920;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455395.1;locus_tag=C9F07_04920;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01000256.1 1 416 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000256.1 Genbank region 1 416 . + . ID=PYKI01000256.1:1..416;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000256.1 Genbank pseudogene 1 416 . - . ID=gene-C9F07_01670;Name=C9F07_01670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01670;pseudo=true PYKI01000256.1 Protein Homology CDS 1 416 . - 0 ID=cds-C9F07_01670;Parent=gene-C9F07_01670;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent%3B frameshifted%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456727.1;locus_tag=C9F07_01670;product=D-lactate dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01001616.1 1 2993 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001616.1 Genbank region 1 2993 . + . ID=PYKI01001616.1:1..2993;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001616.1 Genbank pseudogene 1 381 . - . ID=gene-C9F07_15395;Name=C9F07_15395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15395;pseudo=true PYKI01001616.1 Protein Homology CDS 1 381 . - 0 ID=cds-C9F07_15395;Parent=gene-C9F07_15395;Note=frameshifted%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001355627.1;locus_tag=C9F07_15395;product=AAA family ATPase;pseudo=true;transl_table=11 PYKI01001616.1 Genbank gene 1137 1316 . + . ID=gene-C9F07_15400;Name=C9F07_15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15400 PYKI01001616.1 Protein Homology CDS 1137 1316 . + 0 ID=cds-TGD70781.1;Parent=gene-C9F07_15400;Dbxref=NCBI_GP:TGD70781.1;Name=TGD70781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531405.1;locus_tag=C9F07_15400;product=hypothetical protein;protein_id=TGD70781.1;transl_table=11 PYKI01001616.1 Genbank gene 1339 2049 . + . ID=gene-C9F07_15405;Name=C9F07_15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15405 PYKI01001616.1 Protein Homology CDS 1339 2049 . + 0 ID=cds-TGD70782.1;Parent=gene-C9F07_15405;Dbxref=NCBI_GP:TGD70782.1;Name=TGD70782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454912.1;locus_tag=C9F07_15405;product=fimbrial protein;protein_id=TGD70782.1;transl_table=11 PYKI01001616.1 Genbank gene 2100 2675 . + . ID=gene-C9F07_15410;Name=C9F07_15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15410 PYKI01001616.1 Protein Homology CDS 2100 2675 . + 0 ID=cds-TGD70783.1;Parent=gene-C9F07_15410;Dbxref=NCBI_GP:TGD70783.1;Name=TGD70783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454913.1;locus_tag=C9F07_15410;product=fimbrial protein;protein_id=TGD70783.1;transl_table=11 PYKI01001616.1 Genbank gene 2784 2993 . + . ID=gene-C9F07_15415;Name=C9F07_15415;end_range=2993,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15415;partial=true PYKI01001616.1 Protein Homology CDS 2784 2993 . + 0 ID=cds-TGD70784.1;Parent=gene-C9F07_15415;Dbxref=NCBI_GP:TGD70784.1;Name=TGD70784.1;end_range=2993,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454914.1;locus_tag=C9F07_15415;partial=true;product=hypothetical protein;protein_id=TGD70784.1;transl_table=11 ##sequence-region PYKI01000173.1 1 416 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000173.1 Genbank region 1 416 . + . ID=PYKI01000173.1:1..416;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000173.1 Genbank gene 1 416 . + . ID=gene-C9F07_01180;Name=pyrG;end_range=416,.;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=C9F07_01180;partial=true;start_range=.,1 PYKI01000173.1 Protein Homology CDS 1 416 . + 0 ID=cds-TGE30053.1;Parent=gene-C9F07_01180;Dbxref=NCBI_GP:TGE30053.1;Name=TGE30053.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;end_range=416,.;gbkey=CDS;gene=pyrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=C9F07_01180;partial=true;product=CTP synthetase;protein_id=TGE30053.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000227.1 1 415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000227.1 Genbank region 1 415 . + . ID=PYKI01000227.1:1..415;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000227.1 Genbank gene 1 238 . - . ID=gene-C9F07_01480;Name=C9F07_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01480;partial=true;start_range=.,1 PYKI01000227.1 Protein Homology CDS 1 238 . - 0 ID=cds-TGE27881.1;Parent=gene-C9F07_01480;Dbxref=NCBI_GP:TGE27881.1;Name=TGE27881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454973.1;locus_tag=C9F07_01480;partial=true;product=DUF2755 domain-containing protein;protein_id=TGE27881.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000295.1 1 415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000295.1 Genbank region 1 415 . + . ID=PYKI01000295.1:1..415;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000295.1 Genbank gene 1 197 . + . ID=gene-C9F07_01945;Name=C9F07_01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01945;partial=true;start_range=.,1 PYKI01000295.1 Protein Homology CDS 1 197 . + 2 ID=cds-TGE27807.1;Parent=gene-C9F07_01945;Dbxref=NCBI_GP:TGE27807.1;Name=TGE27807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457470.1;locus_tag=C9F07_01945;partial=true;product=DUF296 domain-containing protein;protein_id=TGE27807.1;start_range=.,1;transl_table=11 PYKI01000295.1 Genbank gene 223 415 . + . ID=gene-C9F07_01950;Name=C9F07_01950;end_range=415,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01950;partial=true PYKI01000295.1 Protein Homology CDS 223 415 . + 0 ID=cds-TGE27808.1;Parent=gene-C9F07_01950;Dbxref=NCBI_GP:TGE27808.1;Name=TGE27808.1;end_range=415,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457471.1;locus_tag=C9F07_01950;partial=true;product=hypothetical protein;protein_id=TGE27808.1;transl_table=11 ##sequence-region PYKI01003194.1 1 415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003194.1 Genbank region 1 415 . + . ID=PYKI01003194.1:1..415;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003194.1 Genbank gene 1 302 . + . ID=gene-C9F07_32055;Name=C9F07_32055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32055;partial=true;start_range=.,1 PYKI01003194.1 Protein Homology CDS 1 302 . + 2 ID=cds-TGD37411.1;Parent=gene-C9F07_32055;Dbxref=NCBI_GP:TGD37411.1;Name=TGD37411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455384.1;locus_tag=C9F07_32055;partial=true;product=hypothetical protein;protein_id=TGD37411.1;start_range=.,1;transl_table=11 PYKI01003194.1 Genbank gene 305 415 . + . ID=gene-C9F07_32060;Name=C9F07_32060;end_range=415,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32060;partial=true PYKI01003194.1 Protein Homology CDS 305 415 . + 0 ID=cds-TGD37410.1;Parent=gene-C9F07_32060;Dbxref=NCBI_GP:TGD37410.1;Name=TGD37410.1;end_range=415,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455385.1;locus_tag=C9F07_32060;partial=true;product=glutathione ABC transporter permease;protein_id=TGD37410.1;transl_table=11 ##sequence-region PYKI01001007.1 1 415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001007.1 Genbank region 1 415 . + . ID=PYKI01001007.1:1..415;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001007.1 Genbank pseudogene 18 380 . + . ID=gene-C9F07_09250;Name=C9F07_09250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09250;pseudo=true PYKI01001007.1 Protein Homology CDS 18 380 . + 0 ID=cds-C9F07_09250;Parent=gene-C9F07_09250;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001721994.1;locus_tag=C9F07_09250;product=capsid protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000186.1 1 415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000186.1 Genbank region 1 415 . + . ID=PYKI01000186.1:1..415;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000186.1 Genbank gene 1 128 . - . ID=gene-C9F07_01255;Name=C9F07_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01255;partial=true;start_range=.,1 PYKI01000186.1 Protein Homology CDS 1 128 . - 0 ID=cds-TGE30039.1;Parent=gene-C9F07_01255;Dbxref=NCBI_GP:TGE30039.1;Name=TGE30039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=C9F07_01255;partial=true;product=threonine export protein RhtC;protein_id=TGE30039.1;start_range=.,1;transl_table=11 PYKI01000186.1 Genbank gene 192 415 . - . ID=gene-C9F07_01260;Name=C9F07_01260;end_range=415,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01260;partial=true PYKI01000186.1 Protein Homology CDS 192 415 . - 2 ID=cds-TGE30040.1;Parent=gene-C9F07_01260;Dbxref=NCBI_GP:TGE30040.1;Name=TGE30040.1;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;end_range=415,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462843.1;locus_tag=C9F07_01260;partial=true;product=ATP-dependent DNA helicase RecQ;protein_id=TGE30040.1;transl_table=11 ##sequence-region PYKI01000866.1 1 414 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000866.1 Genbank region 1 414 . + . ID=PYKI01000866.1:1..414;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000866.1 Genbank gene 1 160 . + . ID=gene-C9F07_07960;Name=C9F07_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07960;partial=true;start_range=.,1 PYKI01000866.1 Protein Homology CDS 1 160 . + 1 ID=cds-TGE05662.1;Parent=gene-C9F07_07960;Dbxref=NCBI_GP:TGE05662.1;Name=TGE05662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456353.1;locus_tag=C9F07_07960;partial=true;product=hypothetical protein;protein_id=TGE05662.1;start_range=.,1;transl_table=11 PYKI01000866.1 Genbank pseudogene 123 347 . + . ID=gene-C9F07_07965;Name=C9F07_07965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07965;pseudo=true PYKI01000866.1 Protein Homology CDS 123 347 . + 0 ID=cds-C9F07_07965;Parent=gene-C9F07_07965;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456354.1;locus_tag=C9F07_07965;product=MCE family protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000906.1 1 414 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000906.1 Genbank region 1 414 . + . ID=PYKI01000906.1:1..414;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000906.1 Genbank gene 1 345 . - . ID=gene-C9F07_08270;Name=C9F07_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08270;partial=true;start_range=.,1 PYKI01000906.1 Protein Homology CDS 1 345 . - 0 ID=cds-TGE03199.1;Parent=gene-C9F07_08270;Dbxref=NCBI_GP:TGE03199.1;Name=TGE03199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455262.1;locus_tag=C9F07_08270;partial=true;product=hypothetical protein;protein_id=TGE03199.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001795.1 1 414 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001795.1 Genbank region 1 414 . + . ID=PYKI01001795.1:1..414;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001795.1 Genbank gene 27 414 . + . ID=gene-C9F07_17280;Name=C9F07_17280;end_range=414,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17280;partial=true PYKI01001795.1 Protein Homology CDS 27 414 . + 0 ID=cds-TGD66026.1;Parent=gene-C9F07_17280;Dbxref=NCBI_GP:TGD66026.1;Name=TGD66026.1;end_range=414,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015690707.1;locus_tag=C9F07_17280;partial=true;product=D-amino acid dehydrogenase;protein_id=TGD66026.1;transl_table=11 ##sequence-region PYKI01002790.1 1 2991 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002790.1 Genbank region 1 2991 . + . ID=PYKI01002790.1:1..2991;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002790.1 Genbank pseudogene 1 1057 . + . ID=gene-C9F07_27890;Name=C9F07_27890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27890;pseudo=true PYKI01002790.1 Protein Homology CDS 1 1057 . + 1 ID=cds-C9F07_27890;Parent=gene-C9F07_27890;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=C9F07_27890;product=30S ribosomal protein S12 methylthiotransferase accessory protein YcaO;pseudo=true;transl_table=11 PYKI01002790.1 Genbank gene 1462 2319 . + . ID=gene-C9F07_27895;Name=C9F07_27895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27895 PYKI01002790.1 Protein Homology CDS 1462 2319 . + 0 ID=cds-TGD46085.1;Parent=gene-C9F07_27895;Dbxref=NCBI_GP:TGD46085.1;Name=TGD46085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455461.1;locus_tag=C9F07_27895;product=formate transporter FocA;protein_id=TGD46085.1;transl_table=11 PYKI01002790.1 Genbank pseudogene 2379 2906 . + . ID=gene-C9F07_27900;Name=C9F07_27900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27900;pseudo=true PYKI01002790.1 Protein Homology CDS 2379 2906 . + 0 ID=cds-C9F07_27900;Parent=gene-C9F07_27900;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455460.1;locus_tag=C9F07_27900;product=formate acetyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01001543.1 1 413 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001543.1 Genbank region 1 413 . + . ID=PYKI01001543.1:1..413;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001543.1 Genbank gene 67 413 . + . ID=gene-C9F07_14750;Name=C9F07_14750;end_range=413,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14750;partial=true PYKI01001543.1 Protein Homology CDS 67 413 . + 0 ID=cds-TGD75371.1;Parent=gene-C9F07_14750;Dbxref=NCBI_GP:TGD75371.1;Name=TGD75371.1;end_range=413,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=C9F07_14750;partial=true;product=NADH-quinone oxidoreductase subunit H;protein_id=TGD75371.1;transl_table=11 ##sequence-region PYKI01002977.1 1 413 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002977.1 Genbank region 1 413 . + . ID=PYKI01002977.1:1..413;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002977.1 Genbank gene 172 413 . + . ID=gene-C9F07_29845;Name=fliE;end_range=413,.;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=C9F07_29845;partial=true PYKI01002977.1 Protein Homology CDS 172 413 . + 0 ID=cds-TGD41550.1;Parent=gene-C9F07_29845;Dbxref=NCBI_GP:TGD41550.1;Name=TGD41550.1;end_range=413,.;gbkey=CDS;gene=fliE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=C9F07_29845;partial=true;product=flagellar hook-basal body complex protein FliE;protein_id=TGD41550.1;transl_table=11 ##sequence-region PYKI01000679.1 1 413 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000679.1 Genbank region 1 413 . + . ID=PYKI01000679.1:1..413;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000679.1 Genbank gene 1 413 . + . ID=gene-C9F07_05910;Name=C9F07_05910;end_range=413,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05910;partial=true;start_range=.,1 PYKI01000679.1 Protein Homology CDS 1 413 . + 1 ID=cds-TGE11591.1;Parent=gene-C9F07_05910;Dbxref=NCBI_GP:TGE11591.1;Name=TGE11591.1;end_range=413,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454706.1;locus_tag=C9F07_05910;partial=true;product=co-chaperone DjlA;protein_id=TGE11591.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001759.1 1 413 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001759.1 Genbank region 1 413 . + . ID=PYKI01001759.1:1..413;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001759.1 Genbank pseudogene 64 413 . - . ID=gene-C9F07_16895;Name=C9F07_16895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16895;pseudo=true PYKI01001759.1 Protein Homology CDS 64 413 . - 2 ID=cds-C9F07_16895;Parent=gene-C9F07_16895;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457558.1;locus_tag=C9F07_16895;product=anion permease;pseudo=true;transl_table=11 ##sequence-region PYKI01001309.1 1 413 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001309.1 Genbank region 1 413 . + . ID=PYKI01001309.1:1..413;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001309.1 Genbank gene 1 413 . - . ID=gene-C9F07_12255;Name=C9F07_12255;end_range=413,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12255;partial=true;start_range=.,1 PYKI01001309.1 Protein Homology CDS 1 413 . - 0 ID=cds-TGD86644.1;Parent=gene-C9F07_12255;Dbxref=NCBI_GP:TGD86644.1;Name=TGD86644.1;end_range=413,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457051.1;locus_tag=C9F07_12255;partial=true;product=hypothetical protein;protein_id=TGD86644.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000109.1 1 412 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000109.1 Genbank region 1 412 . + . ID=PYKI01000109.1:1..412;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000109.1 Genbank gene 212 412 . - . ID=gene-C9F07_00685;Name=ompX;end_range=412,.;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=C9F07_00685;partial=true PYKI01000109.1 Protein Homology CDS 212 412 . - 0 ID=cds-TGE30129.1;Parent=gene-C9F07_00685;Dbxref=NCBI_GP:TGE30129.1;Name=TGE30129.1;Note=OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains;end_range=412,.;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455368.1;locus_tag=C9F07_00685;partial=true;product=outer membrane protein OmpX;protein_id=TGE30129.1;transl_table=11 ##sequence-region PYKI01002419.1 1 412 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002419.1 Genbank region 1 412 . + . ID=PYKI01002419.1:1..412;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002419.1 Genbank pseudogene 49 144 . - . ID=gene-C9F07_23905;Name=C9F07_23905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23905;pseudo=true PYKI01002419.1 Protein Homology CDS 49 144 . - 0 ID=cds-C9F07_23905;Parent=gene-C9F07_23905;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=C9F07_23905;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003331.1 1 412 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003331.1 Genbank region 1 412 . + . ID=PYKI01003331.1:1..412;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003331.1 Genbank pseudogene 1 345 . - . ID=gene-C9F07_33515;Name=C9F07_33515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33515;pseudo=true PYKI01003331.1 Protein Homology CDS 1 345 . - 0 ID=cds-C9F07_33515;Parent=gene-C9F07_33515;Note=YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455088.1;locus_tag=C9F07_33515;product=cation:proton antiport protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002026.1 1 412 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002026.1 Genbank region 1 412 . + . ID=PYKI01002026.1:1..412;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002026.1 Genbank gene 1 371 . - . ID=gene-C9F07_19555;Name=C9F07_19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19555;partial=true;start_range=.,1 PYKI01002026.1 Protein Homology CDS 1 371 . - 0 ID=cds-TGD60048.1;Parent=gene-C9F07_19555;Dbxref=NCBI_GP:TGD60048.1;Name=TGD60048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=C9F07_19555;partial=true;product=fructose-bisphosphatase class II;protein_id=TGD60048.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002327.1 1 2989 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002327.1 Genbank region 1 2989 . + . ID=PYKI01002327.1:1..2989;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002327.1 Genbank pseudogene 75 422 . + . ID=gene-C9F07_22810;Name=C9F07_22810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22810;pseudo=true PYKI01002327.1 Protein Homology CDS 75 422 . + 0 ID=cds-C9F07_22810;Parent=gene-C9F07_22810;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455371.1;locus_tag=C9F07_22810;product=transcriptional regulator MntR;pseudo=true;transl_table=11 PYKI01002327.1 Genbank pseudogene 419 1531 . + . ID=gene-C9F07_22815;Name=C9F07_22815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22815;pseudo=true PYKI01002327.1 Protein Homology CDS 419 1531 . + 0 ID=cds-C9F07_22815;Parent=gene-C9F07_22815;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455372.1;locus_tag=C9F07_22815;product=anion transporter;pseudo=true;transl_table=11 PYKI01002327.1 Genbank gene 1575 2495 . - . ID=gene-C9F07_22820;Name=C9F07_22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22820 PYKI01002327.1 Protein Homology CDS 1575 2495 . - 0 ID=cds-TGD53852.1;Parent=gene-C9F07_22820;Dbxref=NCBI_GP:TGD53852.1;Name=TGD53852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455373.1;locus_tag=C9F07_22820;product=L%2CD-transpeptidase;protein_id=TGD53852.1;transl_table=11 PYKI01002327.1 Genbank gene 2714 2989 . + . ID=gene-C9F07_22825;Name=C9F07_22825;end_range=2989,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22825;partial=true PYKI01002327.1 Protein Homology CDS 2714 2989 . + 0 ID=cds-TGD53853.1;Parent=gene-C9F07_22825;Dbxref=NCBI_GP:TGD53853.1;Name=TGD53853.1;end_range=2989,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455374.1;locus_tag=C9F07_22825;partial=true;product=ABC-F family ATPase;protein_id=TGD53853.1;transl_table=11 ##sequence-region PYKI01001034.1 1 412 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001034.1 Genbank region 1 412 . + . ID=PYKI01001034.1:1..412;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001034.1 Genbank gene 1 385 . - . ID=gene-C9F07_09535;Name=C9F07_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09535;partial=true;start_range=.,1 PYKI01001034.1 Protein Homology CDS 1 385 . - 0 ID=cds-TGD96884.1;Parent=gene-C9F07_09535;Dbxref=NCBI_GP:TGD96884.1;Name=TGD96884.1;Note=streptomycin 3'-adenyltransferase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456247.1;locus_tag=C9F07_09535;partial=true;product=aminoglycoside resistance protein;protein_id=TGD96884.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000197.1 1 411 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000197.1 Genbank region 1 411 . + . ID=PYKI01000197.1:1..411;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000197.1 Genbank gene 1 411 . + . ID=gene-C9F07_01325;Name=C9F07_01325;end_range=411,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01325;partial=true;start_range=.,1 PYKI01000197.1 Protein Homology CDS 1 411 . + 0 ID=cds-TGE30029.1;Parent=gene-C9F07_01325;Dbxref=NCBI_GP:TGE30029.1;Name=TGE30029.1;Note=structural flagella protein%3B individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella%2C termed phase 1 and phase 2%2C each specified by separate structural genes;end_range=411,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460912.1;locus_tag=C9F07_01325;partial=true;product=flagellin FliC;protein_id=TGE30029.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003535.1 1 411 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003535.1 Genbank region 1 411 . + . ID=PYKI01003535.1:1..411;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003535.1 Genbank pseudogene 87 411 . + . ID=gene-C9F07_35690;Name=C9F07_35690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35690;pseudo=true PYKI01003535.1 Protein Homology CDS 87 411 . + 0 ID=cds-C9F07_35690;Parent=gene-C9F07_35690;Note=methylates the MCP%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456484.1;locus_tag=C9F07_35690;product=chemotaxis protein-glutamate O-methyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01003047.1 1 411 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003047.1 Genbank region 1 411 . + . ID=PYKI01003047.1:1..411;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003047.1 Genbank pseudogene 1 405 . + . ID=gene-C9F07_30585;Name=C9F07_30585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30585;pseudo=true PYKI01003047.1 Protein Homology CDS 1 405 . + 0 ID=cds-C9F07_30585;Parent=gene-C9F07_30585;Note=catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455025.1;locus_tag=C9F07_30585;product=2-aminoethylphosphonate--pyruvate transaminase;pseudo=true;transl_table=11 ##sequence-region PYKI01001480.1 1 410 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001480.1 Genbank region 1 410 . + . ID=PYKI01001480.1:1..410;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001480.1 Genbank pseudogene 68 410 . + . ID=gene-C9F07_14065;Name=C9F07_14065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14065;pseudo=true PYKI01001480.1 Protein Homology CDS 68 410 . + 0 ID=cds-C9F07_14065;Parent=gene-C9F07_14065;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=C9F07_14065;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01003515.1 1 410 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003515.1 Genbank region 1 410 . + . ID=PYKI01003515.1:1..410;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003515.1 Genbank gene 1 410 . + . ID=gene-C9F07_35465;Name=C9F07_35465;end_range=410,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35465;partial=true;start_range=.,1 PYKI01003515.1 Protein Homology CDS 1 410 . + 1 ID=cds-TGD31705.1;Parent=gene-C9F07_35465;Dbxref=NCBI_GP:TGD31705.1;Name=TGD31705.1;end_range=410,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=C9F07_35465;partial=true;product=dipeptide ABC transporter permease DppC;protein_id=TGD31705.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002698.1 1 410 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002698.1 Genbank region 1 410 . + . ID=PYKI01002698.1:1..410;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002698.1 Genbank gene 1 410 . + . ID=gene-C9F07_26910;Name=C9F07_26910;end_range=410,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26910;partial=true;start_range=.,1 PYKI01002698.1 Protein Homology CDS 1 410 . + 2 ID=cds-TGD48161.1;Parent=gene-C9F07_26910;Dbxref=NCBI_GP:TGD48161.1;Name=TGD48161.1;end_range=410,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457940.1;locus_tag=C9F07_26910;partial=true;product=phosphoenolpyruvate carboxylase;protein_id=TGD48161.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000820.1 1 2989 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000820.1 Genbank region 1 2989 . + . ID=PYKI01000820.1:1..2989;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000820.1 Genbank gene 1 1117 . - . ID=gene-C9F07_07410;Name=C9F07_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07410;partial=true;start_range=.,1 PYKI01000820.1 Protein Homology CDS 1 1117 . - 0 ID=cds-TGE07369.1;Parent=gene-C9F07_07410;Dbxref=NCBI_GP:TGE07369.1;Name=TGE07369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=C9F07_07410;partial=true;product=RNA degradosome polyphosphate kinase;protein_id=TGE07369.1;start_range=.,1;transl_table=11 PYKI01000820.1 Genbank gene 1306 1944 . - . ID=gene-C9F07_07415;Name=C9F07_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07415 PYKI01000820.1 Protein Homology CDS 1306 1944 . - 0 ID=cds-TGE07370.1;Parent=gene-C9F07_07415;Dbxref=NCBI_GP:TGE07370.1;Name=TGE07370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457035.1;locus_tag=C9F07_07415;product=phosphoribosylglycinamide formyltransferase;protein_id=TGE07370.1;transl_table=11 PYKI01000820.1 Genbank gene 1944 2981 . - . ID=gene-C9F07_07420;Name=C9F07_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07420 PYKI01000820.1 Protein Homology CDS 1944 2981 . - 0 ID=cds-TGE07371.1;Parent=gene-C9F07_07420;Dbxref=NCBI_GP:TGE07371.1;Name=TGE07371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=C9F07_07420;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=TGE07371.1;transl_table=11 ##sequence-region PYKI01001504.1 1 409 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001504.1 Genbank region 1 409 . + . ID=PYKI01001504.1:1..409;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001504.1 Genbank gene 1 409 . + . ID=gene-C9F07_14320;Name=C9F07_14320;end_range=409,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14320;partial=true;start_range=.,1 PYKI01001504.1 Protein Homology CDS 1 409 . + 0 ID=cds-TGD78057.1;Parent=gene-C9F07_14320;Dbxref=NCBI_GP:TGD78057.1;Name=TGD78057.1;end_range=409,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455245.1;locus_tag=C9F07_14320;partial=true;product=hypothetical protein;protein_id=TGD78057.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000282.1 1 409 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000282.1 Genbank region 1 409 . + . ID=PYKI01000282.1:1..409;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000282.1 Genbank gene 41 409 . - . ID=gene-C9F07_01830;Name=C9F07_01830;end_range=409,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01830;partial=true PYKI01000282.1 Protein Homology CDS 41 409 . - 0 ID=cds-TGE27826.1;Parent=gene-C9F07_01830;Dbxref=NCBI_GP:TGE27826.1;Name=TGE27826.1;end_range=409,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457368.1;locus_tag=C9F07_01830;partial=true;product=lactaldehyde reductase;protein_id=TGE27826.1;transl_table=11 ##sequence-region PYKI01000911.1 1 409 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000911.1 Genbank region 1 409 . + . ID=PYKI01000911.1:1..409;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000911.1 Genbank pseudogene 134 214 . - . ID=gene-C9F07_08300;Name=C9F07_08300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08300;pseudo=true PYKI01000911.1 Protein Homology CDS 134 214 . - 0 ID=cds-C9F07_08300;Parent=gene-C9F07_08300;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311973.1;locus_tag=C9F07_08300;product=sodium:sulfate symporter;pseudo=true;transl_table=11 PYKI01000911.1 Genbank gene 316 409 . - . ID=gene-C9F07_08305;Name=C9F07_08305;end_range=409,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08305;partial=true PYKI01000911.1 Protein Homology CDS 316 409 . - 1 ID=cds-TGE03101.1;Parent=gene-C9F07_08305;Dbxref=NCBI_GP:TGE03101.1;Name=TGE03101.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;end_range=409,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001272785.1;locus_tag=C9F07_08305;partial=true;product=acyl-phosphate--glycerol-3-phosphate O-acyltransferase;protein_id=TGE03101.1;transl_table=11 ##sequence-region PYKI01000209.1 1 408 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000209.1 Genbank region 1 408 . + . ID=PYKI01000209.1:1..408;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000209.1 Genbank gene 1 132 . - . ID=gene-C9F07_01385;Name=C9F07_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01385;partial=true;start_range=.,1 PYKI01000209.1 Protein Homology CDS 1 132 . - 0 ID=cds-TGE30020.1;Parent=gene-C9F07_01385;Dbxref=NCBI_GP:TGE30020.1;Name=TGE30020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457690.1;locus_tag=C9F07_01385;partial=true;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=TGE30020.1;start_range=.,1;transl_table=11 PYKI01000209.1 Genbank gene 137 408 . - . ID=gene-C9F07_01390;Name=C9F07_01390;end_range=408,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01390;partial=true PYKI01000209.1 Protein Homology CDS 137 408 . - 2 ID=cds-TGE30019.1;Parent=gene-C9F07_01390;Dbxref=NCBI_GP:TGE30019.1;Name=TGE30019.1;end_range=408,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457691.1;locus_tag=C9F07_01390;partial=true;product=ABC transporter permease;protein_id=TGE30019.1;transl_table=11 ##sequence-region PYKI01003480.1 1 408 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003480.1 Genbank region 1 408 . + . ID=PYKI01003480.1:1..408;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003480.1 Genbank gene 35 408 . - . ID=gene-C9F07_35025;Name=C9F07_35025;end_range=408,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35025;partial=true PYKI01003480.1 Protein Homology CDS 35 408 . - 2 ID=cds-TGD32503.1;Parent=gene-C9F07_35025;Dbxref=NCBI_GP:TGD32503.1;Name=TGD32503.1;end_range=408,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=C9F07_35025;partial=true;product=hypothetical protein;protein_id=TGD32503.1;transl_table=11 ##sequence-region PYKI01001930.1 1 407 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001930.1 Genbank region 1 407 . + . ID=PYKI01001930.1:1..407;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001930.1 Genbank pseudogene 95 407 . - . ID=gene-C9F07_18620;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=pseudogene;gene_synonym=yleB;locus_tag=C9F07_18620;pseudo=true PYKI01001930.1 Protein Homology CDS 95 407 . - 1 ID=cds-C9F07_18620;Parent=gene-C9F07_18620;Note=catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=ubiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=C9F07_18620;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;pseudo=true;transl_table=11 ##sequence-region PYKI01000593.1 1 407 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000593.1 Genbank region 1 407 . + . ID=PYKI01000593.1:1..407;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01001680.1 1 407 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001680.1 Genbank region 1 407 . + . ID=PYKI01001680.1:1..407;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001680.1 Genbank pseudogene 72 407 . + . ID=gene-C9F07_16065;Name=C9F07_16065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16065;pseudo=true PYKI01001680.1 Protein Homology CDS 72 407 . + 0 ID=cds-C9F07_16065;Parent=gene-C9F07_16065;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=C9F07_16065;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01001436.1 1 407 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001436.1 Genbank region 1 407 . + . ID=PYKI01001436.1:1..407;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001436.1 Genbank gene 1 407 . - . ID=gene-C9F07_13595;Name=leuS;end_range=407,.;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=C9F07_13595;partial=true;start_range=.,1 PYKI01001436.1 Protein Homology CDS 1 407 . - 1 ID=cds-TGD83699.1;Parent=gene-C9F07_13595;Dbxref=NCBI_GP:TGD83699.1;Name=TGD83699.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;end_range=407,.;gbkey=CDS;gene=leuS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455224.1;locus_tag=C9F07_13595;partial=true;product=leucine--tRNA ligase;protein_id=TGD83699.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001473.1 1 2984 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001473.1 Genbank region 1 2984 . + . ID=PYKI01001473.1:1..2984;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001473.1 Genbank gene 1 254 . + . ID=gene-C9F07_13965;Name=C9F07_13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13965;partial=true;start_range=.,1 PYKI01001473.1 Protein Homology CDS 1 254 . + 2 ID=cds-TGD80910.1;Parent=gene-C9F07_13965;Dbxref=NCBI_GP:TGD80910.1;Name=TGD80910.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=C9F07_13965;partial=true;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=TGD80910.1;start_range=.,1;transl_table=11 PYKI01001473.1 Genbank gene 337 540 . + . ID=gene-C9F07_13970;Name=C9F07_13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13970 PYKI01001473.1 Protein Homology CDS 337 540 . + 0 ID=cds-TGD80911.1;Parent=gene-C9F07_13970;Dbxref=NCBI_GP:TGD80911.1;Name=TGD80911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014343956.1;locus_tag=C9F07_13970;product=hypothetical protein;protein_id=TGD80911.1;transl_table=11 PYKI01001473.1 Genbank gene 567 1325 . + . ID=gene-C9F07_13975;Name=C9F07_13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13975 PYKI01001473.1 Protein Homology CDS 567 1325 . + 0 ID=cds-TGD80912.1;Parent=gene-C9F07_13975;Dbxref=NCBI_GP:TGD80912.1;Name=TGD80912.1;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=C9F07_13975;product=ditrans%2Cpolycis-undecaprenyl-diphosphate synthase ((2E%2C6E)-farnesyl-diphosphate specific);protein_id=TGD80912.1;transl_table=11 PYKI01001473.1 Genbank gene 1338 2195 . + . ID=gene-C9F07_13980;Name=C9F07_13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13980 PYKI01001473.1 Protein Homology CDS 1338 2195 . + 0 ID=cds-TGD80913.1;Parent=gene-C9F07_13980;Dbxref=NCBI_GP:TGD80913.1;Name=TGD80913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454829.1;locus_tag=C9F07_13980;product=phosphatidate cytidylyltransferase;protein_id=TGD80913.1;transl_table=11 PYKI01001473.1 Genbank pseudogene 2207 2977 . + . ID=gene-C9F07_13985;Name=C9F07_13985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13985;pseudo=true PYKI01001473.1 Protein Homology CDS 2207 2977 . + 0 ID=cds-C9F07_13985;Parent=gene-C9F07_13985;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454830.1;locus_tag=C9F07_13985;product=zinc metallopeptidase RseP;pseudo=true;transl_table=11 ##sequence-region PYKI01002855.1 1 6109 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002855.1 Genbank region 1 6109 . + . ID=PYKI01002855.1:1..6109;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002855.1 Genbank gene 1 1288 . - . ID=gene-C9F07_28540;Name=C9F07_28540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28540;partial=true;start_range=.,1 PYKI01002855.1 Protein Homology CDS 1 1288 . - 0 ID=cds-TGD45010.1;Parent=gene-C9F07_28540;Dbxref=NCBI_GP:TGD45010.1;Name=TGD45010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458552.1;locus_tag=C9F07_28540;partial=true;product=excinuclease ABC subunit UvrA;protein_id=TGD45010.1;start_range=.,1;transl_table=11 PYKI01002855.1 Genbank gene 1253 1369 . + . ID=gene-C9F07_28545;Name=C9F07_28545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28545 PYKI01002855.1 Protein Homology CDS 1253 1369 . + 0 ID=cds-TGD45004.1;Parent=gene-C9F07_28545;Dbxref=NCBI_GP:TGD45004.1;Name=TGD45004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463120.1;locus_tag=C9F07_28545;product=hypothetical protein;protein_id=TGD45004.1;transl_table=11 PYKI01002855.1 Genbank gene 1536 2066 . + . ID=gene-C9F07_28550;Name=C9F07_28550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28550 PYKI01002855.1 Protein Homology CDS 1536 2066 . + 0 ID=cds-TGD45005.1;Parent=gene-C9F07_28550;Dbxref=NCBI_GP:TGD45005.1;Name=TGD45005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458553.1;locus_tag=C9F07_28550;product=ssDNA-binding protein;protein_id=TGD45005.1;transl_table=11 PYKI01002855.1 Genbank gene 2082 2273 . - . ID=gene-C9F07_28555;Name=C9F07_28555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28555 PYKI01002855.1 Protein Homology CDS 2082 2273 . - 0 ID=cds-TGD45006.1;Parent=gene-C9F07_28555;Dbxref=NCBI_GP:TGD45006.1;Name=TGD45006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001692031.1;locus_tag=C9F07_28555;product=hypothetical protein;protein_id=TGD45006.1;transl_table=11 PYKI01002855.1 Genbank gene 2507 2698 . + . ID=gene-C9F07_28560;Name=C9F07_28560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28560 PYKI01002855.1 Protein Homology CDS 2507 2698 . + 0 ID=cds-TGD45007.1;Parent=gene-C9F07_28560;Dbxref=NCBI_GP:TGD45007.1;Name=TGD45007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541305.1;locus_tag=C9F07_28560;product=hypothetical protein;protein_id=TGD45007.1;transl_table=11 PYKI01002855.1 Genbank gene 3106 3738 . + . ID=gene-C9F07_28565;Name=C9F07_28565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28565 PYKI01002855.1 Protein Homology CDS 3106 3738 . + 0 ID=cds-TGD45008.1;Parent=gene-C9F07_28565;Dbxref=NCBI_GP:TGD45008.1;Name=TGD45008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458554.1;locus_tag=C9F07_28565;product=hypothetical protein;protein_id=TGD45008.1;transl_table=11 PYKI01002855.1 Genbank gene 3735 5123 . + . ID=gene-C9F07_28570;Name=C9F07_28570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28570 PYKI01002855.1 Protein Homology CDS 3735 5123 . + 0 ID=cds-TGD45009.1;Parent=gene-C9F07_28570;Dbxref=NCBI_GP:TGD45009.1;Name=TGD45009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458555.1;locus_tag=C9F07_28570;product=hypothetical protein;protein_id=TGD45009.1;transl_table=11 PYKI01002855.1 Genbank gene 5113 6109 . + . ID=gene-C9F07_28575;Name=C9F07_28575;end_range=6109,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28575;partial=true PYKI01002855.1 Protein Homology CDS 5113 6109 . + 0 ID=cds-TGD45011.1;Parent=gene-C9F07_28575;Dbxref=NCBI_GP:TGD45011.1;Name=TGD45011.1;end_range=6109,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=C9F07_28575;partial=true;product=TolC family protein;protein_id=TGD45011.1;transl_table=11 ##sequence-region PYKI01003346.1 1 406 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003346.1 Genbank region 1 406 . + . ID=PYKI01003346.1:1..406;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003346.1 Genbank pseudogene 87 406 . - . ID=gene-C9F07_33675;Name=C9F07_33675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33675;pseudo=true PYKI01003346.1 Protein Homology CDS 87 406 . - 2 ID=cds-C9F07_33675;Parent=gene-C9F07_33675;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=C9F07_33675;product=fimbrial protein StiH;pseudo=true;transl_table=11 ##sequence-region PYKI01000835.1 1 406 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000835.1 Genbank region 1 406 . + . ID=PYKI01000835.1:1..406;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000835.1 Genbank gene 1 406 . + . ID=gene-C9F07_07625;Name=C9F07_07625;end_range=406,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07625;partial=true;start_range=.,1 PYKI01000835.1 Protein Homology CDS 1 406 . + 1 ID=cds-TGE07108.1;Parent=gene-C9F07_07625;Dbxref=NCBI_GP:TGE07108.1;Name=TGE07108.1;end_range=406,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456552.1;locus_tag=C9F07_07625;partial=true;product=hydrolase;protein_id=TGE07108.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003046.1 1 405 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003046.1 Genbank region 1 405 . + . ID=PYKI01003046.1:1..405;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003046.1 Genbank pseudogene 81 389 . + . ID=gene-C9F07_30580;Name=C9F07_30580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30580;pseudo=true PYKI01003046.1 Protein Homology CDS 81 389 . + 0 ID=cds-C9F07_30580;Parent=gene-C9F07_30580;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=C9F07_30580;product=condensin subunit MukF;pseudo=true;transl_table=11 ##sequence-region PYKI01001590.1 1 404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001590.1 Genbank region 1 404 . + . ID=PYKI01001590.1:1..404;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001590.1 Genbank gene 1 404 . - . ID=gene-C9F07_15195;Name=C9F07_15195;end_range=404,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15195;partial=true;start_range=.,1 PYKI01001590.1 Protein Homology CDS 1 404 . - 0 ID=cds-TGD72254.1;Parent=gene-C9F07_15195;Dbxref=NCBI_GP:TGD72254.1;Name=TGD72254.1;Note=catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate;end_range=404,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457460.1;locus_tag=C9F07_15195;partial=true;product=phosphoglycerate dehydrogenase;protein_id=TGD72254.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003278.1 1 404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003278.1 Genbank region 1 404 . + . ID=PYKI01003278.1:1..404;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003278.1 Genbank gene 1 404 . + . ID=gene-C9F07_32975;Name=menC;end_range=404,.;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=C9F07_32975;partial=true;start_range=.,1 PYKI01003278.1 Protein Homology CDS 1 404 . + 0 ID=cds-TGD36159.1;Parent=gene-C9F07_32975;Dbxref=NCBI_GP:TGD36159.1;Name=TGD36159.1;end_range=404,.;gbkey=CDS;gene=menC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456849.1;locus_tag=C9F07_32975;partial=true;product=o-succinylbenzoate synthase;protein_id=TGD36159.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000907.1 1 404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000907.1 Genbank region 1 404 . + . ID=PYKI01000907.1:1..404;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000907.1 Genbank gene 1 404 . + . ID=gene-C9F07_08275;Name=C9F07_08275;end_range=404,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08275;partial=true;start_range=.,1 PYKI01000907.1 Protein Homology CDS 1 404 . + 2 ID=cds-TGE03112.1;Parent=gene-C9F07_08275;Dbxref=NCBI_GP:TGE03112.1;Name=TGE03112.1;end_range=404,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455787.1;locus_tag=C9F07_08275;partial=true;product=phosphatidylglycerophosphatase B;protein_id=TGE03112.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003081.1 1 404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003081.1 Genbank region 1 404 . + . ID=PYKI01003081.1:1..404;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003081.1 Genbank gene 1 166 . + . ID=gene-C9F07_30860;Name=C9F07_30860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30860;partial=true;start_range=.,1 PYKI01003081.1 Protein Homology CDS 1 166 . + 1 ID=cds-TGD40413.1;Parent=gene-C9F07_30860;Dbxref=NCBI_GP:TGD40413.1;Name=TGD40413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462038.1;locus_tag=C9F07_30860;partial=true;product=anaerobic sulfatase maturase;protein_id=TGD40413.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001787.1 1 403 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001787.1 Genbank region 1 403 . + . ID=PYKI01001787.1:1..403;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001787.1 Genbank gene 1 149 . + . ID=gene-C9F07_17160;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=C9F07_17160;partial=true;start_range=.,1 PYKI01001787.1 Protein Homology CDS 1 149 . + 2 ID=cds-TGD66665.1;Parent=gene-C9F07_17160;Dbxref=NCBI_GP:TGD66665.1;Name=TGD66665.1;Note=Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates;gbkey=CDS;gene=sbcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456614.1;locus_tag=C9F07_17160;partial=true;product=exodeoxyribonuclease I;protein_id=TGD66665.1;start_range=.,1;transl_table=11 PYKI01001787.1 Genbank gene 285 403 . - . ID=gene-C9F07_17165;Name=C9F07_17165;end_range=403,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17165;partial=true PYKI01001787.1 Protein Homology CDS 285 403 . - 2 ID=cds-TGD66666.1;Parent=gene-C9F07_17165;Dbxref=NCBI_GP:TGD66666.1;Name=TGD66666.1;end_range=403,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456615.1;locus_tag=C9F07_17165;partial=true;product=amino acid transporter;protein_id=TGD66666.1;transl_table=11 ##sequence-region PYKI01003454.1 1 403 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003454.1 Genbank region 1 403 . + . ID=PYKI01003454.1:1..403;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003454.1 Genbank pseudogene 59 403 . - . ID=gene-C9F07_34735;Name=C9F07_34735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34735;pseudo=true PYKI01003454.1 Protein Homology CDS 59 403 . - 0 ID=cds-C9F07_34735;Parent=gene-C9F07_34735;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313088.1;locus_tag=C9F07_34735;product=formate dehydrogenase subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKI01002942.1 1 403 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002942.1 Genbank region 1 403 . + . ID=PYKI01002942.1:1..403;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002942.1 Genbank gene 1 403 . - . ID=gene-C9F07_29485;Name=tilS;end_range=403,.;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=C9F07_29485;partial=true;start_range=.,1 PYKI01002942.1 Protein Homology CDS 1 403 . - 1 ID=cds-TGD42531.1;Parent=gene-C9F07_29485;Dbxref=NCBI_GP:TGD42531.1;Name=TGD42531.1;Note=Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase;end_range=403,.;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=C9F07_29485;partial=true;product=tRNA(Ile)-lysidine synthetase;protein_id=TGD42531.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000149.1 1 402 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000149.1 Genbank region 1 402 . + . ID=PYKI01000149.1:1..402;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000149.1 Genbank pseudogene 65 367 . + . ID=gene-C9F07_01000;Name=C9F07_01000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01000;pseudo=true PYKI01000149.1 Protein Homology CDS 65 367 . + 0 ID=cds-C9F07_01000;Parent=gene-C9F07_01000;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458584.1;locus_tag=C9F07_01000;product=formate dehydrogenase subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKI01000048.1 1 402 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000048.1 Genbank region 1 402 . + . ID=PYKI01000048.1:1..402;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000048.1 Genbank pseudogene 78 402 . - . ID=gene-C9F07_00265;Name=infB;gbkey=Gene;gene=infB;gene_biotype=pseudogene;locus_tag=C9F07_00265;pseudo=true PYKI01000048.1 Protein Homology CDS 78 402 . - 1 ID=cds-C9F07_00265;Parent=gene-C9F07_00265;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=infB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312076.1;locus_tag=C9F07_00265;product=translation initiation factor IF-2;pseudo=true;transl_table=11 ##sequence-region PYKI01001028.1 1 401 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001028.1 Genbank region 1 401 . + . ID=PYKI01001028.1:1..401;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001028.1 Genbank pseudogene 1 348 . + . ID=gene-C9F07_09480;Name=C9F07_09480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09480;pseudo=true PYKI01001028.1 Protein Homology CDS 1 348 . + 0 ID=cds-C9F07_09480;Parent=gene-C9F07_09480;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=C9F07_09480;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;pseudo=true;transl_table=11 ##sequence-region PYKI01002832.1 1 400 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002832.1 Genbank region 1 400 . + . ID=PYKI01002832.1:1..400;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002832.1 Genbank gene 59 400 . + . ID=gene-C9F07_28330;Name=C9F07_28330;end_range=400,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28330;partial=true PYKI01002832.1 Protein Homology CDS 59 400 . + 0 ID=cds-TGD45594.1;Parent=gene-C9F07_28330;Dbxref=NCBI_GP:TGD45594.1;Name=TGD45594.1;end_range=400,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455881.1;locus_tag=C9F07_28330;partial=true;product=PTS sugar transporter subunit IIA;protein_id=TGD45594.1;transl_table=11 ##sequence-region PYKI01003449.1 1 399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003449.1 Genbank region 1 399 . + . ID=PYKI01003449.1:1..399;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003449.1 Genbank gene 156 399 . - . ID=gene-C9F07_34675;Name=hflB;end_range=399,.;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=C9F07_34675;partial=true PYKI01003449.1 Protein Homology CDS 156 399 . - 1 ID=cds-TGD33400.1;Parent=gene-C9F07_34675;Dbxref=NCBI_GP:TGD33400.1;Name=TGD33400.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;end_range=399,.;gbkey=CDS;gene=hflB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=C9F07_34675;partial=true;product=ATP-dependent metalloprotease;protein_id=TGD33400.1;transl_table=11 ##sequence-region PYKI01001415.1 1 399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001415.1 Genbank region 1 399 . + . ID=PYKI01001415.1:1..399;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001415.1 Genbank pseudogene 1 325 . - . ID=gene-C9F07_13420;Name=C9F07_13420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13420;pseudo=true PYKI01001415.1 Protein Homology CDS 1 325 . - 0 ID=cds-C9F07_13420;Parent=gene-C9F07_13420;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309066.1;locus_tag=C9F07_13420;product=Lon protease family protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001213.1 1 399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001213.1 Genbank region 1 399 . + . ID=PYKI01001213.1:1..399;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001213.1 Genbank gene 1 399 . - . ID=gene-C9F07_11365;Name=C9F07_11365;end_range=399,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11365;partial=true;start_range=.,1 PYKI01001213.1 Protein Homology CDS 1 399 . - 1 ID=cds-TGD91339.1;Parent=gene-C9F07_11365;Dbxref=NCBI_GP:TGD91339.1;Name=TGD91339.1;end_range=399,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=C9F07_11365;partial=true;product=methyl-accepting chemotaxis protein;protein_id=TGD91339.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003228.1 1 398 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003228.1 Genbank region 1 398 . + . ID=PYKI01003228.1:1..398;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003228.1 Genbank gene 1 152 . + . ID=gene-C9F07_32505;Name=C9F07_32505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32505;partial=true;start_range=.,1 PYKI01003228.1 Protein Homology CDS 1 152 . + 2 ID=cds-TGD36602.1;Parent=gene-C9F07_32505;Dbxref=NCBI_GP:TGD36602.1;Name=TGD36602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=C9F07_32505;partial=true;product=LysR family transcriptional regulator;protein_id=TGD36602.1;start_range=.,1;transl_table=11 PYKI01003228.1 Genbank gene 154 398 . - . ID=gene-C9F07_32510;Name=C9F07_32510;end_range=398,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32510;partial=true PYKI01003228.1 Protein Homology CDS 154 398 . - 2 ID=cds-TGD36603.1;Parent=gene-C9F07_32510;Dbxref=NCBI_GP:TGD36603.1;Name=TGD36603.1;end_range=398,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458439.1;locus_tag=C9F07_32510;partial=true;product=monooxygenase;protein_id=TGD36603.1;transl_table=11 ##sequence-region PYKI01000782.1 1 398 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000782.1 Genbank region 1 398 . + . ID=PYKI01000782.1:1..398;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000782.1 Genbank gene 26 398 . + . ID=gene-C9F07_07065;Name=C9F07_07065;end_range=398,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07065;partial=true PYKI01000782.1 Protein Homology CDS 26 398 . + 0 ID=cds-TGE09166.1;Parent=gene-C9F07_07065;Dbxref=NCBI_GP:TGE09166.1;Name=TGE09166.1;end_range=398,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574779.1;locus_tag=C9F07_07065;partial=true;product=nickel transporter;protein_id=TGE09166.1;transl_table=11 ##sequence-region PYKI01001578.1 1 398 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001578.1 Genbank region 1 398 . + . ID=PYKI01001578.1:1..398;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001578.1 Genbank gene 250 398 . - . ID=gene-C9F07_15110;Name=emrD;end_range=398,.;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=C9F07_15110;partial=true PYKI01001578.1 Protein Homology CDS 250 398 . - 2 ID=cds-TGD72901.1;Parent=gene-C9F07_15110;Dbxref=NCBI_GP:TGD72901.1;Name=TGD72901.1;Note=multidrug efflux protein involved in adaptation to low energy shock;end_range=398,.;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458139.1;locus_tag=C9F07_15110;partial=true;product=multidrug transporter EmrD;protein_id=TGD72901.1;transl_table=11 ##sequence-region PYKI01002367.1 1 398 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002367.1 Genbank region 1 398 . + . ID=PYKI01002367.1:1..398;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002367.1 Genbank pseudogene 60 332 . + . ID=gene-C9F07_23280;Name=C9F07_23280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23280;pseudo=true PYKI01002367.1 Protein Homology CDS 60 332 . + 0 ID=cds-C9F07_23280;Parent=gene-C9F07_23280;Note=catalyzes the oxidation of acetaldehyde%2C benzaldehyde%2C propionaldehyde and other aldehydes%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=C9F07_23280;product=aldehyde dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01000320.1 1 397 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000320.1 Genbank region 1 397 . + . ID=PYKI01000320.1:1..397;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000320.1 Genbank gene 1 397 . + . ID=gene-C9F07_02210;Name=C9F07_02210;end_range=397,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02210;partial=true;start_range=.,1 PYKI01000320.1 Protein Homology CDS 1 397 . + 1 ID=cds-TGE26883.1;Parent=gene-C9F07_02210;Dbxref=NCBI_GP:TGE26883.1;Name=TGE26883.1;end_range=397,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002412788.1;locus_tag=C9F07_02210;partial=true;product=aldo/keto reductase;protein_id=TGE26883.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003200.1 1 397 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003200.1 Genbank region 1 397 . + . ID=PYKI01003200.1:1..397;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003200.1 Genbank gene 1 255 . - . ID=gene-C9F07_32155;Name=C9F07_32155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32155;partial=true;start_range=.,1 PYKI01003200.1 Protein Homology CDS 1 255 . - 0 ID=cds-TGD37300.1;Parent=gene-C9F07_32155;Dbxref=NCBI_GP:TGD37300.1;Name=TGD37300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=C9F07_32155;partial=true;product=dihydroneopterin triphosphate diphosphatase;protein_id=TGD37300.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002074.1 1 397 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002074.1 Genbank region 1 397 . + . ID=PYKI01002074.1:1..397;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002074.1 Genbank pseudogene 66 368 . - . ID=gene-C9F07_20130;Name=C9F07_20130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20130;pseudo=true PYKI01002074.1 Protein Homology CDS 66 368 . - 0 ID=cds-C9F07_20130;Parent=gene-C9F07_20130;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456770.1;locus_tag=C9F07_20130;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002102.1 1 396 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002102.1 Genbank region 1 396 . + . ID=PYKI01002102.1:1..396;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002102.1 Genbank gene 1 99 . - . ID=gene-C9F07_20405;Name=C9F07_20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20405;partial=true;start_range=.,1 PYKI01002102.1 Protein Homology CDS 1 99 . - 0 ID=cds-TGD58781.1;Parent=gene-C9F07_20405;Dbxref=NCBI_GP:TGD58781.1;Name=TGD58781.1;Note=catalyzes phosphorylation of fructose%3B cytosolic enzyme;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210445.1;locus_tag=C9F07_20405;partial=true;product=fructokinase;protein_id=TGD58781.1;start_range=.,1;transl_table=11 PYKI01002102.1 Genbank gene 165 396 . + . ID=gene-C9F07_20410;Name=C9F07_20410;end_range=396,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20410;partial=true PYKI01002102.1 Protein Homology CDS 165 396 . + 0 ID=cds-TGD58780.1;Parent=gene-C9F07_20410;Dbxref=NCBI_GP:TGD58780.1;Name=TGD58780.1;Note=Required for efficient pilin antigenic variation;end_range=396,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=C9F07_20410;partial=true;product=recombination-associated protein RdgC;protein_id=TGD58780.1;transl_table=11 ##sequence-region PYKI01002002.1 1 396 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002002.1 Genbank region 1 396 . + . ID=PYKI01002002.1:1..396;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002002.1 Genbank gene 1 396 . - . ID=gene-C9F07_19300;Name=C9F07_19300;end_range=396,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19300;partial=true;start_range=.,1 PYKI01002002.1 Protein Homology CDS 1 396 . - 1 ID=cds-TGD60146.1;Parent=gene-C9F07_19300;Dbxref=NCBI_GP:TGD60146.1;Name=TGD60146.1;end_range=396,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=C9F07_19300;partial=true;product=hypothetical protein;protein_id=TGD60146.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003120.1 1 396 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003120.1 Genbank region 1 396 . + . ID=PYKI01003120.1:1..396;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003120.1 Genbank gene 1 396 . + . ID=gene-C9F07_31210;Name=C9F07_31210;end_range=396,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31210;partial=true;start_range=.,1 PYKI01003120.1 Protein Homology CDS 1 396 . + 0 ID=cds-TGD39356.1;Parent=gene-C9F07_31210;Dbxref=NCBI_GP:TGD39356.1;Name=TGD39356.1;Note=predicted SAM-dependent methyltransferase;end_range=396,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458324.1;locus_tag=C9F07_31210;partial=true;product=16S rRNA (guanine(1516)-N(2))-methyltransferase;protein_id=TGD39356.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000183.1 1 395 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000183.1 Genbank region 1 395 . + . ID=PYKI01000183.1:1..395;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000183.1 Genbank gene 315 395 . + . ID=gene-C9F07_01240;Name=C9F07_01240;end_range=395,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01240;partial=true PYKI01000183.1 Protein Homology CDS 315 395 . + 0 ID=cds-TGE30043.1;Parent=gene-C9F07_01240;Dbxref=NCBI_GP:TGE30043.1;Name=TGE30043.1;end_range=395,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539474.1;locus_tag=C9F07_01240;partial=true;product=replication initiation regulator SeqA;protein_id=TGE30043.1;transl_table=11 ##sequence-region PYKI01003183.1 1 2980 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003183.1 Genbank region 1 2980 . + . ID=PYKI01003183.1:1..2980;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003183.1 Genbank gene 74 856 . - . ID=gene-C9F07_31930;Name=C9F07_31930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31930 PYKI01003183.1 Protein Homology CDS 74 856 . - 0 ID=cds-TGD37654.1;Parent=gene-C9F07_31930;Dbxref=NCBI_GP:TGD37654.1;Name=TGD37654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=C9F07_31930;product=tRNA pseudouridine(65) synthase TruC;protein_id=TGD37654.1;transl_table=11 PYKI01003183.1 Genbank gene 856 1185 . - . ID=gene-C9F07_31935;Name=C9F07_31935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31935 PYKI01003183.1 Protein Homology CDS 856 1185 . - 0 ID=cds-TGD37658.1;Parent=gene-C9F07_31935;Dbxref=NCBI_GP:TGD37658.1;Name=TGD37658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457361.1;locus_tag=C9F07_31935;product=hypothetical protein;protein_id=TGD37658.1;transl_table=11 PYKI01003183.1 Genbank gene 1341 1553 . - . ID=gene-C9F07_31940;Name=C9F07_31940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31940 PYKI01003183.1 Protein Homology CDS 1341 1553 . - 0 ID=cds-TGD37655.1;Parent=gene-C9F07_31940;Dbxref=NCBI_GP:TGD37655.1;Name=TGD37655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988723.1;locus_tag=C9F07_31940;product=hypothetical protein;protein_id=TGD37655.1;transl_table=11 PYKI01003183.1 Genbank gene 1797 2342 . - . ID=gene-C9F07_31945;Name=C9F07_31945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31945 PYKI01003183.1 Protein Homology CDS 1797 2342 . - 0 ID=cds-TGD37656.1;Parent=gene-C9F07_31945;Dbxref=NCBI_GP:TGD37656.1;Name=TGD37656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457362.1;locus_tag=C9F07_31945;product=SecY-interacting protein;protein_id=TGD37656.1;transl_table=11 PYKI01003183.1 Genbank gene 2411 2980 . + . ID=gene-C9F07_31950;Name=queF;end_range=2980,.;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=C9F07_31950;partial=true PYKI01003183.1 Protein Homology CDS 2411 2980 . + 0 ID=cds-TGD37657.1;Parent=gene-C9F07_31950;Dbxref=NCBI_GP:TGD37657.1;Name=TGD37657.1;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;end_range=2980,.;gbkey=CDS;gene=queF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457363.1;locus_tag=C9F07_31950;partial=true;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=TGD37657.1;transl_table=11 ##sequence-region PYKI01001855.1 1 394 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001855.1 Genbank region 1 394 . + . ID=PYKI01001855.1:1..394;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001855.1 Genbank pseudogene 54 394 . + . ID=gene-C9F07_17850;Name=C9F07_17850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17850;pseudo=true PYKI01001855.1 Protein Homology CDS 54 394 . + 0 ID=cds-C9F07_17850;Parent=gene-C9F07_17850;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=C9F07_17850;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001301.1 1 394 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001301.1 Genbank region 1 394 . + . ID=PYKI01001301.1:1..394;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001301.1 Genbank gene 1 248 . - . ID=gene-C9F07_12195;Name=C9F07_12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12195;partial=true;start_range=.,1 PYKI01001301.1 Protein Homology CDS 1 248 . - 0 ID=cds-TGD87117.1;Parent=gene-C9F07_12195;Dbxref=NCBI_GP:TGD87117.1;Name=TGD87117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455272.1;locus_tag=C9F07_12195;partial=true;product=hypothetical protein;protein_id=TGD87117.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001124.1 1 394 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001124.1 Genbank region 1 394 . + . ID=PYKI01001124.1:1..394;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001124.1 Genbank pseudogene 1 328 . - . ID=gene-C9F07_10465;Name=C9F07_10465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10465;pseudo=true PYKI01001124.1 Protein Homology CDS 1 328 . - 0 ID=cds-C9F07_10465;Parent=gene-C9F07_10465;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=C9F07_10465;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000642.1 1 394 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000642.1 Genbank region 1 394 . + . ID=PYKI01000642.1:1..394;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000642.1 Genbank pseudogene 1 312 . + . ID=gene-C9F07_05560;Name=C9F07_05560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05560;pseudo=true PYKI01000642.1 Protein Homology CDS 1 312 . + 0 ID=cds-C9F07_05560;Parent=gene-C9F07_05560;Note=c-di-GMP phosphodiesterase%3B probably degrades signalling molecule c-di-GMP%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455794.1;locus_tag=C9F07_05560;product=cyclic di-GMP phosphodiesterase;pseudo=true;transl_table=11 ##sequence-region PYKI01001650.1 1 393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001650.1 Genbank region 1 393 . + . ID=PYKI01001650.1:1..393;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001650.1 Genbank pseudogene 1 393 . - . ID=gene-C9F07_15760;Name=C9F07_15760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15760;pseudo=true PYKI01001650.1 Protein Homology CDS 1 393 . - 0 ID=cds-C9F07_15760;Parent=gene-C9F07_15760;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=C9F07_15760;product=enterobactin synthetase subunit F;pseudo=true;transl_table=11 ##sequence-region PYKI01003495.1 1 393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003495.1 Genbank region 1 393 . + . ID=PYKI01003495.1:1..393;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003495.1 Genbank gene 1 154 . + . ID=gene-C9F07_35175;Name=C9F07_35175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35175;partial=true;start_range=.,1 PYKI01003495.1 Protein Homology CDS 1 154 . + 1 ID=cds-TGD32166.1;Parent=gene-C9F07_35175;Dbxref=NCBI_GP:TGD32166.1;Name=TGD32166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728729.1;locus_tag=C9F07_35175;partial=true;product=exodeoxyribonuclease VIII;protein_id=TGD32166.1;start_range=.,1;transl_table=11 PYKI01003495.1 Genbank gene 151 393 . + . ID=gene-C9F07_35180;Name=C9F07_35180;end_range=393,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35180;partial=true PYKI01003495.1 Protein Homology CDS 151 393 . + 0 ID=cds-TGD32167.1;Parent=gene-C9F07_35180;Dbxref=NCBI_GP:TGD32167.1;Name=TGD32167.1;end_range=393,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=C9F07_35180;partial=true;product=integrase;protein_id=TGD32167.1;transl_table=11 ##sequence-region PYKI01002844.1 1 391 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002844.1 Genbank region 1 391 . + . ID=PYKI01002844.1:1..391;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002844.1 Genbank pseudogene 52 391 . - . ID=gene-C9F07_28440;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=pseudogene;gene_synonym=nhaP2,ycgO;locus_tag=C9F07_28440;pseudo=true PYKI01002844.1 Protein Homology CDS 52 391 . - 1 ID=cds-C9F07_28440;Parent=gene-C9F07_28440;Note=the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=cvrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456308.1;locus_tag=C9F07_28440;product=K+/H+ antiporter;pseudo=true;transl_table=11 ##sequence-region PYKI01001156.1 1 391 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001156.1 Genbank region 1 391 . + . ID=PYKI01001156.1:1..391;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001156.1 Genbank pseudogene 70 330 . - . ID=gene-C9F07_10805;Name=flhe;gbkey=Gene;gene=flhe;gene_biotype=pseudogene;locus_tag=C9F07_10805;pseudo=true PYKI01001156.1 Protein Homology CDS 70 330 . - 0 ID=cds-C9F07_10805;Parent=gene-C9F07_10805;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=flhe;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456478.1;locus_tag=C9F07_10805;product=flagellar protein FlhE;pseudo=true;transl_table=11 ##sequence-region PYKI01000846.1 1 2959 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000846.1 Genbank region 1 2959 . + . ID=PYKI01000846.1:1..2959;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000846.1 Genbank gene 1 150 . - . ID=gene-C9F07_07705;Name=C9F07_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07705;partial=true;start_range=.,1 PYKI01000846.1 Protein Homology CDS 1 150 . - 0 ID=cds-TGE06975.1;Parent=gene-C9F07_07705;Dbxref=NCBI_GP:TGE06975.1;Name=TGE06975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457942.1;locus_tag=C9F07_07705;partial=true;product=AraC family transcriptional regulator;protein_id=TGE06975.1;start_range=.,1;transl_table=11 PYKI01000846.1 Genbank gene 311 2044 . - . ID=gene-C9F07_07710;Name=C9F07_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07710 PYKI01000846.1 Protein Homology CDS 311 2044 . - 0 ID=cds-TGE06976.1;Parent=gene-C9F07_07710;Dbxref=NCBI_GP:TGE06976.1;Name=TGE06976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457941.1;locus_tag=C9F07_07710;product=hypothetical protein;protein_id=TGE06976.1;transl_table=11 PYKI01000846.1 Genbank gene 2255 2959 . - . ID=gene-C9F07_07715;Name=C9F07_07715;end_range=2959,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07715;partial=true PYKI01000846.1 Protein Homology CDS 2255 2959 . - 0 ID=cds-TGE06977.1;Parent=gene-C9F07_07715;Dbxref=NCBI_GP:TGE06977.1;Name=TGE06977.1;end_range=2959,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457940.1;locus_tag=C9F07_07715;partial=true;product=phosphoenolpyruvate carboxylase;protein_id=TGE06977.1;transl_table=11 ##sequence-region PYKI01000721.1 1 390 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000721.1 Genbank region 1 390 . + . ID=PYKI01000721.1:1..390;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000721.1 Genbank gene 1 390 . - . ID=gene-C9F07_06325;Name=C9F07_06325;end_range=390,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06325;partial=true;start_range=.,1 PYKI01000721.1 Protein Homology CDS 1 390 . - 2 ID=cds-TGE11114.1;Parent=gene-C9F07_06325;Dbxref=NCBI_GP:TGE11114.1;Name=TGE11114.1;end_range=390,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461448.1;locus_tag=C9F07_06325;partial=true;product=AIDA autotransporter;protein_id=TGE11114.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003076.1 1 390 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003076.1 Genbank region 1 390 . + . ID=PYKI01003076.1:1..390;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003076.1 Genbank gene 122 390 . + . ID=gene-C9F07_30830;Name=C9F07_30830;end_range=390,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30830;partial=true PYKI01003076.1 Protein Homology CDS 122 390 . + 0 ID=cds-TGD40434.1;Parent=gene-C9F07_30830;Dbxref=NCBI_GP:TGD40434.1;Name=TGD40434.1;end_range=390,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458396.1;locus_tag=C9F07_30830;partial=true;product=hypothetical protein;protein_id=TGD40434.1;transl_table=11 ##sequence-region PYKI01001971.1 1 389 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001971.1 Genbank region 1 389 . + . ID=PYKI01001971.1:1..389;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001971.1 Genbank gene 1 99 . - . ID=gene-C9F07_19010;Name=C9F07_19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19010;partial=true;start_range=.,1 PYKI01001971.1 Protein Homology CDS 1 99 . - 0 ID=cds-TGD60304.1;Parent=gene-C9F07_19010;Dbxref=NCBI_GP:TGD60304.1;Name=TGD60304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=C9F07_19010;partial=true;product=hypothetical protein;protein_id=TGD60304.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002578.1 1 389 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002578.1 Genbank region 1 389 . + . ID=PYKI01002578.1:1..389;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002578.1 Genbank gene 1 389 . - . ID=gene-C9F07_25605;Name=C9F07_25605;end_range=389,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25605;partial=true;start_range=.,1 PYKI01002578.1 Protein Homology CDS 1 389 . - 0 ID=cds-TGD49748.1;Parent=gene-C9F07_25605;Dbxref=NCBI_GP:TGD49748.1;Name=TGD49748.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;end_range=389,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312079.1;locus_tag=C9F07_25605;partial=true;product=argininosuccinate synthase;protein_id=TGD49748.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001651.1 1 388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001651.1 Genbank region 1 388 . + . ID=PYKI01001651.1:1..388;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001651.1 Genbank gene 1 388 . - . ID=gene-C9F07_15765;Name=C9F07_15765;end_range=388,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15765;partial=true;start_range=.,1 PYKI01001651.1 Protein Homology CDS 1 388 . - 2 ID=cds-TGD70254.1;Parent=gene-C9F07_15765;Dbxref=NCBI_GP:TGD70254.1;Name=TGD70254.1;end_range=388,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459348.1;locus_tag=C9F07_15765;partial=true;product=ATPase;protein_id=TGD70254.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001392.1 1 388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001392.1 Genbank region 1 388 . + . ID=PYKI01001392.1:1..388;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001392.1 Genbank pseudogene 66 388 . - . ID=gene-C9F07_13185;Name=C9F07_13185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13185;pseudo=true PYKI01001392.1 Protein Homology CDS 66 388 . - 2 ID=cds-C9F07_13185;Parent=gene-C9F07_13185;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455165.1;locus_tag=C9F07_13185;product=enterobactin synthetase subunit F;pseudo=true;transl_table=11 ##sequence-region PYKI01003391.1 1 387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003391.1 Genbank region 1 387 . + . ID=PYKI01003391.1:1..387;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003391.1 Genbank pseudogene 51 387 . - . ID=gene-C9F07_34120;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=pseudogene;locus_tag=C9F07_34120;pseudo=true PYKI01003391.1 Protein Homology CDS 51 387 . - 1 ID=cds-C9F07_34120;Parent=gene-C9F07_34120;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=xseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=C9F07_34120;product=exodeoxyribonuclease VII large subunit;pseudo=true;transl_table=11 ##sequence-region PYKI01000942.1 1 387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000942.1 Genbank region 1 387 . + . ID=PYKI01000942.1:1..387;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000942.1 Genbank pseudogene 20 325 . + . ID=gene-C9F07_08590;Name=C9F07_08590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08590;pseudo=true PYKI01000942.1 Protein Homology CDS 20 325 . + 0 ID=cds-C9F07_08590;Parent=gene-C9F07_08590;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455599.1;locus_tag=C9F07_08590;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;pseudo=true;transl_table=11 ##sequence-region PYKI01000075.1 1 387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000075.1 Genbank region 1 387 . + . ID=PYKI01000075.1:1..387;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000075.1 Genbank gene 1 387 . + . ID=gene-C9F07_00465;Name=C9F07_00465;end_range=387,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00465;partial=true;start_range=.,1 PYKI01000075.1 Protein Homology CDS 1 387 . + 1 ID=cds-TGE30164.1;Parent=gene-C9F07_00465;Dbxref=NCBI_GP:TGE30164.1;Name=TGE30164.1;end_range=387,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456526.1;locus_tag=C9F07_00465;partial=true;product=hypothetical protein;protein_id=TGE30164.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002593.1 1 2959 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002593.1 Genbank region 1 2959 . + . ID=PYKI01002593.1:1..2959;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002593.1 Genbank gene 1 794 . - . ID=gene-C9F07_25740;Name=C9F07_25740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25740;partial=true;start_range=.,1 PYKI01002593.1 Protein Homology CDS 1 794 . - 0 ID=cds-TGD49671.1;Parent=gene-C9F07_25740;Dbxref=NCBI_GP:TGD49671.1;Name=TGD49671.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008783788.1;locus_tag=C9F07_25740;partial=true;product=cytosol nonspecific dipeptidase;protein_id=TGD49671.1;start_range=.,1;transl_table=11 PYKI01002593.1 Genbank gene 1043 1501 . + . ID=gene-C9F07_25745;Name=C9F07_25745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25745 PYKI01002593.1 Protein Homology CDS 1043 1501 . + 0 ID=cds-TGD49672.1;Parent=gene-C9F07_25745;Dbxref=NCBI_GP:TGD49672.1;Name=TGD49672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454929.1;locus_tag=C9F07_25745;product=xanthine phosphoribosyltransferase;protein_id=TGD49672.1;transl_table=11 PYKI01002593.1 Genbank gene 1590 2834 . + . ID=gene-C9F07_25750;Name=C9F07_25750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25750 PYKI01002593.1 Protein Homology CDS 1590 2834 . + 0 ID=cds-TGD49673.1;Parent=gene-C9F07_25750;Dbxref=NCBI_GP:TGD49673.1;Name=TGD49673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454930.1;locus_tag=C9F07_25750;product=esterase FrsA;protein_id=TGD49673.1;transl_table=11 ##sequence-region PYKI01000613.1 1 387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000613.1 Genbank region 1 387 . + . ID=PYKI01000613.1:1..387;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000613.1 Genbank gene 1 387 . + . ID=gene-C9F07_05270;Name=C9F07_05270;end_range=387,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05270;partial=true;start_range=.,1 PYKI01000613.1 Protein Homology CDS 1 387 . + 1 ID=cds-TGE13880.1;Parent=gene-C9F07_05270;Dbxref=NCBI_GP:TGE13880.1;Name=TGE13880.1;end_range=387,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457745.1;locus_tag=C9F07_05270;partial=true;product=hypothetical protein;protein_id=TGE13880.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002786.1 1 386 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002786.1 Genbank region 1 386 . + . ID=PYKI01002786.1:1..386;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002786.1 Genbank gene 1 386 . + . ID=gene-C9F07_27840;Name=C9F07_27840;end_range=386,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27840;partial=true;start_range=.,1 PYKI01002786.1 Protein Homology CDS 1 386 . + 0 ID=cds-TGD46161.1;Parent=gene-C9F07_27840;Dbxref=NCBI_GP:TGD46161.1;Name=TGD46161.1;end_range=386,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576642.1;locus_tag=C9F07_27840;partial=true;product=hypothetical protein;protein_id=TGD46161.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001786.1 1 386 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001786.1 Genbank region 1 386 . + . ID=PYKI01001786.1:1..386;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001786.1 Genbank pseudogene 17 386 . - . ID=gene-C9F07_17155;Name=C9F07_17155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17155;pseudo=true PYKI01001786.1 Protein Homology CDS 17 386 . - 1 ID=cds-C9F07_17155;Parent=gene-C9F07_17155;Note=catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456452.1;locus_tag=C9F07_17155;product=phosphogluconate dehydratase;pseudo=true;transl_table=11 ##sequence-region PYKI01002222.1 1 386 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002222.1 Genbank region 1 386 . + . ID=PYKI01002222.1:1..386;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002222.1 Genbank gene 1 235 . + . ID=gene-C9F07_21660;Name=C9F07_21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21660;partial=true;start_range=.,1 PYKI01002222.1 Protein Homology CDS 1 235 . + 1 ID=cds-TGD56462.1;Parent=gene-C9F07_21660;Dbxref=NCBI_GP:TGD56462.1;Name=TGD56462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455610.1;locus_tag=C9F07_21660;partial=true;product=disulfide bond formation protein DsbA;protein_id=TGD56462.1;start_range=.,1;transl_table=11 PYKI01002222.1 Genbank gene 225 386 . + . ID=gene-C9F07_21665;Name=C9F07_21665;end_range=386,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21665;partial=true PYKI01002222.1 Protein Homology CDS 225 386 . + 0 ID=cds-TGD56463.1;Parent=gene-C9F07_21665;Dbxref=NCBI_GP:TGD56463.1;Name=TGD56463.1;end_range=386,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455611.1;locus_tag=C9F07_21665;partial=true;product=protein disulfide oxidoreductase;protein_id=TGD56463.1;transl_table=11 ##sequence-region PYKI01003385.1 1 386 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003385.1 Genbank region 1 386 . + . ID=PYKI01003385.1:1..386;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003385.1 Genbank gene 1 386 . - . ID=gene-C9F07_34070;Name=C9F07_34070;end_range=386,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34070;partial=true;start_range=.,1 PYKI01003385.1 Protein Homology CDS 1 386 . - 0 ID=cds-TGD34279.1;Parent=gene-C9F07_34070;Dbxref=NCBI_GP:TGD34279.1;Name=TGD34279.1;end_range=386,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=C9F07_34070;partial=true;product=hypothetical protein;protein_id=TGD34279.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000794.1 1 386 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000794.1 Genbank region 1 386 . + . ID=PYKI01000794.1:1..386;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000794.1 Genbank gene 1 325 . - . ID=gene-C9F07_07135;Name=C9F07_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07135;partial=true;start_range=.,1 PYKI01000794.1 Protein Homology CDS 1 325 . - 0 ID=cds-TGE09152.1;Parent=gene-C9F07_07135;Dbxref=NCBI_GP:TGE09152.1;Name=TGE09152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=C9F07_07135;partial=true;product=fimbriae assembly protein;protein_id=TGE09152.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000195.1 1 386 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000195.1 Genbank region 1 386 . + . ID=PYKI01000195.1:1..386;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000195.1 Genbank gene 1 386 . - . ID=gene-C9F07_01315;Name=C9F07_01315;end_range=386,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01315;partial=true;start_range=.,1 PYKI01000195.1 Protein Homology CDS 1 386 . - 1 ID=cds-TGE30031.1;Parent=gene-C9F07_01315;Dbxref=NCBI_GP:TGE30031.1;Name=TGE30031.1;end_range=386,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=C9F07_01315;partial=true;product=chemotaxis protein CheA;protein_id=TGE30031.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000009.1 1 385 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000009.1 Genbank region 1 385 . + . ID=PYKI01000009.1:1..385;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000009.1 Genbank gene 1 213 . + . ID=gene-C9F07_00050;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=C9F07_00050;partial=true;start_range=.,1 PYKI01000009.1 Protein Homology CDS 1 213 . + 0 ID=cds-TGE30220.1;Parent=gene-C9F07_00050;Dbxref=NCBI_GP:TGE30220.1;Name=TGE30220.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=C9F07_00050;partial=true;product=propanediol diffusion facilitator PduF;protein_id=TGE30220.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000232.1 1 385 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000232.1 Genbank region 1 385 . + . ID=PYKI01000232.1:1..385;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000232.1 Genbank gene 1 385 . + . ID=gene-C9F07_01515;Name=C9F07_01515;end_range=385,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01515;partial=true;start_range=.,1 PYKI01000232.1 Protein Homology CDS 1 385 . + 0 ID=cds-TGE27876.1;Parent=gene-C9F07_01515;Dbxref=NCBI_GP:TGE27876.1;Name=TGE27876.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;end_range=385,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457602.1;locus_tag=C9F07_01515;partial=true;product=RNA polymerase sigma factor RpoD;protein_id=TGE27876.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002400.1 1 2958 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002400.1 Genbank region 1 2958 . + . ID=PYKI01002400.1:1..2958;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002400.1 Genbank gene 377 1555 . + . ID=gene-C9F07_23625;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=C9F07_23625 PYKI01002400.1 Protein Homology CDS 377 1555 . + 0 ID=cds-TGD51963.1;Parent=gene-C9F07_23625;Dbxref=NCBI_GP:TGD51963.1;Name=TGD51963.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457268.1;locus_tag=C9F07_23625;product=type III secretion system inner membrane ring protein PrgH;protein_id=TGD51963.1;transl_table=11 PYKI01002400.1 Genbank gene 1580 1822 . + . ID=gene-C9F07_23630;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=C9F07_23630 PYKI01002400.1 Protein Homology CDS 1580 1822 . + 0 ID=cds-TGD51964.1;Parent=gene-C9F07_23630;Dbxref=NCBI_GP:TGD51964.1;Name=TGD51964.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457267.1;locus_tag=C9F07_23630;product=type III secretion system needle complex protein PrgI;protein_id=TGD51964.1;transl_table=11 PYKI01002400.1 Genbank gene 1841 2146 . + . ID=gene-C9F07_23635;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=C9F07_23635 PYKI01002400.1 Protein Homology CDS 1841 2146 . + 0 ID=cds-TGD51965.1;Parent=gene-C9F07_23635;Dbxref=NCBI_GP:TGD51965.1;Name=TGD51965.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=C9F07_23635;product=type III secretion system inner rod protein PrgJ;protein_id=TGD51965.1;transl_table=11 PYKI01002400.1 Genbank gene 2143 2901 . + . ID=gene-C9F07_23640;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=C9F07_23640 PYKI01002400.1 Protein Homology CDS 2143 2901 . + 0 ID=cds-TGD51966.1;Parent=gene-C9F07_23640;Dbxref=NCBI_GP:TGD51966.1;Name=TGD51966.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457265.1;locus_tag=C9F07_23640;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=TGD51966.1;transl_table=11 PYKI01002400.1 Genbank gene 2873 2958 . + . ID=gene-C9F07_23645;Name=C9F07_23645;end_range=2958,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23645;partial=true PYKI01002400.1 Protein Homology CDS 2873 2958 . + 0 ID=cds-TGD51967.1;Parent=gene-C9F07_23645;Dbxref=NCBI_GP:TGD51967.1;Name=TGD51967.1;Note=oxygen regulated%3B required for internalization into the host cell;end_range=2958,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=C9F07_23645;partial=true;product=oxygen-regulated invasion protein OrgA;protein_id=TGD51967.1;transl_table=11 ##sequence-region PYKI01000143.1 1 384 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000143.1 Genbank region 1 384 . + . ID=PYKI01000143.1:1..384;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000143.1 Genbank gene 123 384 . + . ID=gene-C9F07_00970;Name=C9F07_00970;end_range=384,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00970;partial=true PYKI01000143.1 Protein Homology CDS 123 384 . + 0 ID=cds-TGE30080.1;Parent=gene-C9F07_00970;Dbxref=NCBI_GP:TGE30080.1;Name=TGE30080.1;end_range=384,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454993.1;locus_tag=C9F07_00970;partial=true;product=hypothetical protein;protein_id=TGE30080.1;transl_table=11 ##sequence-region PYKI01001827.1 1 384 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001827.1 Genbank region 1 384 . + . ID=PYKI01001827.1:1..384;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001827.1 Genbank pseudogene 1 384 . - . ID=gene-C9F07_17575;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=pseudogene;locus_tag=C9F07_17575;pseudo=true PYKI01001827.1 Protein Homology CDS 1 384 . - 1 ID=cds-C9F07_17575;Parent=gene-C9F07_17575;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;gene=dppD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957243.1;locus_tag=C9F07_17575;product=dipeptide ABC transporter ATP-binding protein DppD;pseudo=true;transl_table=11 ##sequence-region PYKI01000900.1 1 383 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000900.1 Genbank region 1 383 . + . ID=PYKI01000900.1:1..383;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000900.1 Genbank gene 1 383 . - . ID=gene-C9F07_08225;Name=C9F07_08225;end_range=383,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08225;partial=true;start_range=.,1 PYKI01000900.1 Protein Homology CDS 1 383 . - 0 ID=cds-TGE03210.1;Parent=gene-C9F07_08225;Dbxref=NCBI_GP:TGE03210.1;Name=TGE03210.1;end_range=383,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455393.1;locus_tag=C9F07_08225;partial=true;product=multidrug transporter MdfA;protein_id=TGE03210.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001933.1 1 383 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001933.1 Genbank region 1 383 . + . ID=PYKI01001933.1:1..383;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001933.1 Genbank gene 1 383 . + . ID=gene-C9F07_18645;Name=C9F07_18645;end_range=383,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18645;partial=true;start_range=.,1 PYKI01001933.1 Protein Homology CDS 1 383 . + 2 ID=cds-TGD60787.1;Parent=gene-C9F07_18645;Dbxref=NCBI_GP:TGD60787.1;Name=TGD60787.1;end_range=383,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=C9F07_18645;partial=true;product=hypothetical protein;protein_id=TGD60787.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002300.1 1 383 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002300.1 Genbank region 1 383 . + . ID=PYKI01002300.1:1..383;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002300.1 Genbank pseudogene 1 211 . - . ID=gene-C9F07_22565;Name=C9F07_22565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22565;pseudo=true PYKI01002300.1 Protein Homology CDS 1 211 . - 0 ID=cds-C9F07_22565;Parent=gene-C9F07_22565;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=C9F07_22565;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002300.1 Genbank gene 215 383 . - . ID=gene-C9F07_22570;Name=C9F07_22570;end_range=383,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22570;partial=true PYKI01002300.1 Protein Homology CDS 215 383 . - 1 ID=cds-TGD54531.1;Parent=gene-C9F07_22570;Dbxref=NCBI_GP:TGD54531.1;Name=TGD54531.1;end_range=383,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=C9F07_22570;partial=true;product=peptidase T;protein_id=TGD54531.1;transl_table=11 ##sequence-region PYKI01002046.1 1 380 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002046.1 Genbank region 1 380 . + . ID=PYKI01002046.1:1..380;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002046.1 Genbank gene 1 380 . + . ID=gene-C9F07_19795;Name=ompS1;end_range=380,.;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=C9F07_19795;partial=true;start_range=.,1 PYKI01002046.1 Protein Homology CDS 1 380 . + 1 ID=cds-TGD59975.1;Parent=gene-C9F07_19795;Dbxref=NCBI_GP:TGD59975.1;Name=TGD59975.1;end_range=380,.;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=C9F07_19795;partial=true;product=porin OmpS1;protein_id=TGD59975.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003173.1 1 2954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003173.1 Genbank region 1 2954 . + . ID=PYKI01003173.1:1..2954;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003173.1 Genbank gene 1 2188 . - . ID=gene-C9F07_31840;Name=C9F07_31840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31840;partial=true;start_range=.,1 PYKI01003173.1 Protein Homology CDS 1 2188 . - 0 ID=cds-TGD37833.1;Parent=gene-C9F07_31840;Dbxref=NCBI_GP:TGD37833.1;Name=TGD37833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=C9F07_31840;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=TGD37833.1;start_range=.,1;transl_table=11 PYKI01003173.1 Genbank gene 2701 2954 . + . ID=gene-C9F07_31845;Name=C9F07_31845;end_range=2954,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31845;partial=true PYKI01003173.1 Protein Homology CDS 2701 2954 . + 0 ID=cds-TGD37834.1;Parent=gene-C9F07_31845;Dbxref=NCBI_GP:TGD37834.1;Name=TGD37834.1;end_range=2954,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454967.1;locus_tag=C9F07_31845;partial=true;product=porphobilinogen synthase;protein_id=TGD37834.1;transl_table=11 ##sequence-region PYKI01000636.1 1 379 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000636.1 Genbank region 1 379 . + . ID=PYKI01000636.1:1..379;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000636.1 Genbank gene 1 379 . + . ID=gene-C9F07_05485;Name=C9F07_05485;end_range=379,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05485;partial=true;start_range=.,1 PYKI01000636.1 Protein Homology CDS 1 379 . + 1 ID=cds-TGE13060.1;Parent=gene-C9F07_05485;Dbxref=NCBI_GP:TGE13060.1;Name=TGE13060.1;end_range=379,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456324.1;locus_tag=C9F07_05485;partial=true;product=ribonuclease D;protein_id=TGE13060.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000693.1 1 379 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000693.1 Genbank region 1 379 . + . ID=PYKI01000693.1:1..379;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000693.1 Genbank gene 1 379 . + . ID=gene-C9F07_06085;Name=C9F07_06085;end_range=379,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06085;partial=true;start_range=.,1 PYKI01000693.1 Protein Homology CDS 1 379 . + 0 ID=cds-TGE11326.1;Parent=gene-C9F07_06085;Dbxref=NCBI_GP:TGE11326.1;Name=TGE11326.1;end_range=379,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=C9F07_06085;partial=true;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=TGE11326.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003084.1 1 379 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003084.1 Genbank region 1 379 . + . ID=PYKI01003084.1:1..379;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003084.1 Genbank pseudogene 65 319 . - . ID=gene-C9F07_30885;Name=C9F07_30885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30885;pseudo=true PYKI01003084.1 Protein Homology CDS 65 319 . - 0 ID=cds-C9F07_30885;Parent=gene-C9F07_30885;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=C9F07_30885;product=threonine synthase;pseudo=true;transl_table=11 ##sequence-region PYKI01000049.1 1 378 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000049.1 Genbank region 1 378 . + . ID=PYKI01000049.1:1..378;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000049.1 Genbank pseudogene 92 343 . - . ID=gene-C9F07_00270;Name=C9F07_00270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00270;pseudo=true PYKI01000049.1 Protein Homology CDS 92 343 . - 0 ID=cds-C9F07_00270;Parent=gene-C9F07_00270;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008351.1;locus_tag=C9F07_00270;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002383.1 1 378 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002383.1 Genbank region 1 378 . + . ID=PYKI01002383.1:1..378;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002383.1 Genbank gene 1 378 . + . ID=gene-C9F07_23440;Name=C9F07_23440;end_range=378,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23440;partial=true;start_range=.,1 PYKI01002383.1 Protein Homology CDS 1 378 . + 1 ID=cds-TGD52353.1;Parent=gene-C9F07_23440;Dbxref=NCBI_GP:TGD52353.1;Name=TGD52353.1;end_range=378,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455679.1;locus_tag=C9F07_23440;partial=true;product=ribonuclease E;protein_id=TGD52353.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003317.1 1 378 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003317.1 Genbank region 1 378 . + . ID=PYKI01003317.1:1..378;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003317.1 Genbank gene 1 378 . + . ID=gene-C9F07_33360;Name=C9F07_33360;end_range=378,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33360;partial=true;start_range=.,1 PYKI01003317.1 Protein Homology CDS 1 378 . + 2 ID=cds-TGD35975.1;Parent=gene-C9F07_33360;Dbxref=NCBI_GP:TGD35975.1;Name=TGD35975.1;end_range=378,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=C9F07_33360;partial=true;product=hemagglutinin;protein_id=TGD35975.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001684.1 1 377 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001684.1 Genbank region 1 377 . + . ID=PYKI01001684.1:1..377;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001684.1 Genbank gene 1 377 . + . ID=gene-C9F07_16090;Name=C9F07_16090;end_range=377,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16090;partial=true;start_range=.,1 PYKI01001684.1 Protein Homology CDS 1 377 . + 2 ID=cds-TGD69733.1;Parent=gene-C9F07_16090;Dbxref=NCBI_GP:TGD69733.1;Name=TGD69733.1;Note=quinoprotein glucose dehydrogenase%3B catalyzes the formation of D-glucono-1%2C5-lactone from D-glucose and ubiquinone;end_range=377,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454782.1;locus_tag=C9F07_16090;partial=true;product=membrane-bound PQQ-dependent dehydrogenase%2C glucose/quinate/shikimate family;protein_id=TGD69733.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002086.1 1 377 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002086.1 Genbank region 1 377 . + . ID=PYKI01002086.1:1..377;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002086.1 Genbank gene 1 377 . - . ID=gene-C9F07_20230;Name=C9F07_20230;end_range=377,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20230;partial=true;start_range=.,1 PYKI01002086.1 Protein Homology CDS 1 377 . - 0 ID=cds-TGD59296.1;Parent=gene-C9F07_20230;Dbxref=NCBI_GP:TGD59296.1;Name=TGD59296.1;Note=catalyzes the phosphorylation of ribulose to ribulose 5-phosphate;end_range=377,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454715.1;locus_tag=C9F07_20230;partial=true;product=ribulokinase;protein_id=TGD59296.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003445.1 1 377 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003445.1 Genbank region 1 377 . + . ID=PYKI01003445.1:1..377;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003445.1 Genbank gene 1 377 . - . ID=gene-C9F07_34640;Name=C9F07_34640;end_range=377,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34640;partial=true;start_range=.,1 PYKI01003445.1 Protein Homology CDS 1 377 . - 2 ID=cds-TGD33414.1;Parent=gene-C9F07_34640;Dbxref=NCBI_GP:TGD33414.1;Name=TGD33414.1;end_range=377,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=C9F07_34640;partial=true;product=hypothetical protein;protein_id=TGD33414.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000652.1 1 2954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000652.1 Genbank region 1 2954 . + . ID=PYKI01000652.1:1..2954;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000652.1 Genbank gene 126 683 . + . ID=gene-C9F07_05650;Name=C9F07_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05650 PYKI01000652.1 Protein Homology CDS 126 683 . + 0 ID=cds-TGE12259.1;Parent=gene-C9F07_05650;Dbxref=NCBI_GP:TGE12259.1;Name=TGE12259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=C9F07_05650;product=DUF3156 domain-containing protein;protein_id=TGE12259.1;transl_table=11 PYKI01000652.1 Genbank gene 788 1471 . - . ID=gene-C9F07_05655;Name=C9F07_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05655 PYKI01000652.1 Protein Homology CDS 788 1471 . - 0 ID=cds-TGE12260.1;Parent=gene-C9F07_05655;Dbxref=NCBI_GP:TGE12260.1;Name=TGE12260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457520.1;locus_tag=C9F07_05655;product=LuxR family transcriptional regulator;protein_id=TGE12260.1;transl_table=11 PYKI01000652.1 Genbank gene 1982 2954 . + . ID=gene-C9F07_05660;Name=C9F07_05660;end_range=2954,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05660;partial=true PYKI01000652.1 Protein Homology CDS 1982 2954 . + 0 ID=cds-TGE12261.1;Parent=gene-C9F07_05660;Dbxref=NCBI_GP:TGE12261.1;Name=TGE12261.1;end_range=2954,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462038.1;locus_tag=C9F07_05660;partial=true;product=anaerobic sulfatase maturase;protein_id=TGE12261.1;transl_table=11 ##sequence-region PYKI01001881.1 1 377 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001881.1 Genbank region 1 377 . + . ID=PYKI01001881.1:1..377;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001881.1 Genbank gene 1 377 . + . ID=gene-C9F07_18150;Name=C9F07_18150;end_range=377,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18150;partial=true;start_range=.,1 PYKI01001881.1 Protein Homology CDS 1 377 . + 2 ID=cds-TGD62160.1;Parent=gene-C9F07_18150;Dbxref=NCBI_GP:TGD62160.1;Name=TGD62160.1;end_range=377,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=C9F07_18150;partial=true;product=hypothetical protein;protein_id=TGD62160.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003161.1 1 376 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003161.1 Genbank region 1 376 . + . ID=PYKI01003161.1:1..376;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003161.1 Genbank gene 1 79 . + . ID=gene-C9F07_31695;Name=C9F07_31695;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F07_31695;partial=true;start_range=.,1 PYKI01003161.1 Genbank rRNA 1 79 . + . ID=rna-C9F07_31695;Parent=gene-C9F07_31695;gbkey=rRNA;locus_tag=C9F07_31695;partial=true;product=16S ribosomal RNA;start_range=.,1 PYKI01003161.1 Genbank exon 1 79 . + . ID=exon-C9F07_31695-1;Parent=rna-C9F07_31695;gbkey=rRNA;locus_tag=C9F07_31695;partial=true;product=16S ribosomal RNA;start_range=.,1 PYKI01003161.1 Genbank gene 153 228 . + . ID=gene-C9F07_31700;Name=C9F07_31700;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_31700 PYKI01003161.1 tRNAscan-SE tRNA 153 228 . + . ID=rna-C9F07_31700;Parent=gene-C9F07_31700;anticodon=(pos:187..189);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_31700;product=tRNA-Glu PYKI01003161.1 tRNAscan-SE exon 153 228 . + . ID=exon-C9F07_31700-1;Parent=rna-C9F07_31700;anticodon=(pos:187..189);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_31700;product=tRNA-Glu ##sequence-region PYKI01000141.1 1 376 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000141.1 Genbank region 1 376 . + . ID=PYKI01000141.1:1..376;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000141.1 Genbank gene 1 376 . + . ID=gene-C9F07_00960;Name=C9F07_00960;end_range=376,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00960;partial=true;start_range=.,1 PYKI01000141.1 Protein Homology CDS 1 376 . + 1 ID=cds-TGE30081.1;Parent=gene-C9F07_00960;Dbxref=NCBI_GP:TGE30081.1;Name=TGE30081.1;end_range=376,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455072.1;locus_tag=C9F07_00960;partial=true;product=hydrophobe/amphiphile efflux-1 family RND transporter;protein_id=TGE30081.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000333.1 1 376 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000333.1 Genbank region 1 376 . + . ID=PYKI01000333.1:1..376;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000333.1 Genbank gene 1 376 . - . ID=gene-C9F07_02410;Name=katE;end_range=376,.;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=C9F07_02410;partial=true;start_range=.,1 PYKI01000333.1 Protein Homology CDS 1 376 . - 2 ID=cds-TGE26851.1;Parent=gene-C9F07_02410;Dbxref=NCBI_GP:TGE26851.1;Name=TGE26851.1;Note=Catalase HPII%3B monofunctional catalase that decomposes hydrogen peroxide into water and oxygen%3B serves to protect cells from the toxic effects of hydrogen peroxide;end_range=376,.;gbkey=CDS;gene=katE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456193.1;locus_tag=C9F07_02410;partial=true;product=catalase HPII;protein_id=TGE26851.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000201.1 1 376 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000201.1 Genbank region 1 376 . + . ID=PYKI01000201.1:1..376;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000201.1 Genbank gene 60 376 . + . ID=gene-C9F07_01345;Name=C9F07_01345;end_range=376,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01345;partial=true PYKI01000201.1 Protein Homology CDS 60 376 . + 0 ID=cds-TGE30025.1;Parent=gene-C9F07_01345;Dbxref=NCBI_GP:TGE30025.1;Name=TGE30025.1;end_range=376,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=C9F07_01345;partial=true;product=iron ABC transporter ATP-binding protein FetA;protein_id=TGE30025.1;transl_table=11 ##sequence-region PYKI01003112.1 1 376 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003112.1 Genbank region 1 376 . + . ID=PYKI01003112.1:1..376;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003112.1 Genbank gene 1 376 . - . ID=gene-C9F07_31140;Name=C9F07_31140;end_range=376,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31140;partial=true;start_range=.,1 PYKI01003112.1 Protein Homology CDS 1 376 . - 0 ID=cds-TGD39565.1;Parent=gene-C9F07_31140;Dbxref=NCBI_GP:TGD39565.1;Name=TGD39565.1;end_range=376,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456238.1;locus_tag=C9F07_31140;partial=true;product=hypothetical protein;protein_id=TGD39565.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002076.1 1 375 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002076.1 Genbank region 1 375 . + . ID=PYKI01002076.1:1..375;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002076.1 Genbank gene 1 375 . + . ID=gene-C9F07_20140;Name=C9F07_20140;end_range=375,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20140;partial=true;start_range=.,1 PYKI01002076.1 Protein Homology CDS 1 375 . + 2 ID=cds-TGD59316.1;Parent=gene-C9F07_20140;Dbxref=NCBI_GP:TGD59316.1;Name=TGD59316.1;end_range=375,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456063.1;locus_tag=C9F07_20140;partial=true;product=class II fumarate hydratase;protein_id=TGD59316.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003322.1 1 375 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003322.1 Genbank region 1 375 . + . ID=PYKI01003322.1:1..375;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003322.1 Genbank gene 1 54 . - . ID=gene-C9F07_33410;Name=C9F07_33410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33410;partial=true;start_range=.,1 PYKI01003322.1 Protein Homology CDS 1 54 . - 0 ID=cds-TGD35943.1;Parent=gene-C9F07_33410;Dbxref=NCBI_GP:TGD35943.1;Name=TGD35943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009091402.1;locus_tag=C9F07_33410;partial=true;product=cytochrome bd-I oxidase subunit CydX;protein_id=TGD35943.1;start_range=.,1;transl_table=11 PYKI01003322.1 Genbank gene 69 375 . - . ID=gene-C9F07_33415;Name=C9F07_33415;end_range=375,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33415;partial=true PYKI01003322.1 Protein Homology CDS 69 375 . - 1 ID=cds-TGD35942.1;Parent=gene-C9F07_33415;Dbxref=NCBI_GP:TGD35942.1;Name=TGD35942.1;end_range=375,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455297.1;locus_tag=C9F07_33415;partial=true;product=cytochrome d ubiquinol oxidase subunit 2;protein_id=TGD35942.1;transl_table=11 ##sequence-region PYKI01002195.1 1 375 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002195.1 Genbank region 1 375 . + . ID=PYKI01002195.1:1..375;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002195.1 Genbank gene 1 375 . + . ID=gene-C9F07_21340;Name=C9F07_21340;end_range=375,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21340;partial=true;start_range=.,1 PYKI01002195.1 Protein Homology CDS 1 375 . + 1 ID=cds-TGD56602.1;Parent=gene-C9F07_21340;Dbxref=NCBI_GP:TGD56602.1;Name=TGD56602.1;end_range=375,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=C9F07_21340;partial=true;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=TGD56602.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003105.1 1 2950 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003105.1 Genbank region 1 2950 . + . ID=PYKI01003105.1:1..2950;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003105.1 Genbank gene 1 440 . - . ID=gene-C9F07_31080;Name=C9F07_31080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31080;partial=true;start_range=.,1 PYKI01003105.1 Protein Homology CDS 1 440 . - 0 ID=cds-TGD39778.1;Parent=gene-C9F07_31080;Dbxref=NCBI_GP:TGD39778.1;Name=TGD39778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458865.1;locus_tag=C9F07_31080;partial=true;product=transcription antiterminator BglG;protein_id=TGD39778.1;start_range=.,1;transl_table=11 PYKI01003105.1 Genbank gene 397 1137 . - . ID=gene-C9F07_31085;Name=C9F07_31085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31085 PYKI01003105.1 Protein Homology CDS 397 1137 . - 0 ID=cds-TGD39776.1;Parent=gene-C9F07_31085;Dbxref=NCBI_GP:TGD39776.1;Name=TGD39776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=C9F07_31085;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=TGD39776.1;transl_table=11 PYKI01003105.1 Genbank gene 1134 2252 . - . ID=gene-C9F07_31090;Name=C9F07_31090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31090 PYKI01003105.1 Protein Homology CDS 1134 2252 . - 0 ID=cds-TGD39777.1;Parent=gene-C9F07_31090;Dbxref=NCBI_GP:TGD39777.1;Name=TGD39777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=C9F07_31090;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=TGD39777.1;transl_table=11 PYKI01003105.1 Genbank pseudogene 2236 2904 . - . ID=gene-C9F07_31095;Name=C9F07_31095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31095;pseudo=true PYKI01003105.1 Protein Homology CDS 2236 2904 . - 0 ID=cds-C9F07_31095;Parent=gene-C9F07_31095;Note=Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458862.1;locus_tag=C9F07_31095;product=amidohydrolase/deacetylase family metallohydrolase;pseudo=true;transl_table=11 ##sequence-region PYKI01001822.1 1 374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001822.1 Genbank region 1 374 . + . ID=PYKI01001822.1:1..374;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001822.1 Genbank pseudogene 1 369 . - . ID=gene-C9F07_17530;Name=C9F07_17530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17530;pseudo=true PYKI01001822.1 Protein Homology CDS 1 369 . - 0 ID=cds-C9F07_17530;Parent=gene-C9F07_17530;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341247.1;locus_tag=C9F07_17530;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000378.1 1 374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000378.1 Genbank region 1 374 . + . ID=PYKI01000378.1:1..374;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000378.1 Genbank pseudogene 1 314 . - . ID=gene-C9F07_02860;Name=C9F07_02860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02860;pseudo=true PYKI01000378.1 Protein Homology CDS 1 314 . - 0 ID=cds-C9F07_02860;Parent=gene-C9F07_02860;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002413835.1;locus_tag=C9F07_02860;product=exonuclease V subunit gamma;pseudo=true;transl_table=11 ##sequence-region PYKI01003489.1 1 374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003489.1 Genbank region 1 374 . + . ID=PYKI01003489.1:1..374;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003489.1 Genbank gene 1 374 . - . ID=gene-C9F07_35105;Name=C9F07_35105;end_range=374,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35105;partial=true;start_range=.,1 PYKI01003489.1 Protein Homology CDS 1 374 . - 1 ID=cds-TGD32199.1;Parent=gene-C9F07_35105;Dbxref=NCBI_GP:TGD32199.1;Name=TGD32199.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;end_range=374,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=C9F07_35105;partial=true;product=3-oxoacyl-ACP synthase;protein_id=TGD32199.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001403.1 1 374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001403.1 Genbank region 1 374 . + . ID=PYKI01001403.1:1..374;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001403.1 Genbank gene 1 374 . + . ID=gene-C9F07_13285;Name=C9F07_13285;end_range=374,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13285;partial=true;start_range=.,1 PYKI01001403.1 Protein Homology CDS 1 374 . + 1 ID=cds-TGD83965.1;Parent=gene-C9F07_13285;Dbxref=NCBI_GP:TGD83965.1;Name=TGD83965.1;end_range=374,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=C9F07_13285;partial=true;product=hypothetical protein;protein_id=TGD83965.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002012.1 1 373 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002012.1 Genbank region 1 373 . + . ID=PYKI01002012.1:1..373;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002012.1 Genbank gene 1 373 . + . ID=gene-C9F07_19405;Name=C9F07_19405;end_range=373,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19405;partial=true;start_range=.,1 PYKI01002012.1 Protein Homology CDS 1 373 . + 0 ID=cds-TGD60105.1;Parent=gene-C9F07_19405;Dbxref=NCBI_GP:TGD60105.1;Name=TGD60105.1;end_range=373,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884382.1;locus_tag=C9F07_19405;partial=true;product=cystine ABC transporter substrate-binding protein;protein_id=TGD60105.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001586.1 1 373 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001586.1 Genbank region 1 373 . + . ID=PYKI01001586.1:1..373;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001586.1 Genbank pseudogene 41 295 . + . ID=gene-C9F07_15160;Name=C9F07_15160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15160;pseudo=true PYKI01001586.1 Protein Homology CDS 41 295 . + 0 ID=cds-C9F07_15160;Parent=gene-C9F07_15160;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=C9F07_15160;product=glutamate synthase;pseudo=true;transl_table=11 ##sequence-region PYKI01002701.1 1 373 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002701.1 Genbank region 1 373 . + . ID=PYKI01002701.1:1..373;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002701.1 Genbank gene 1 373 . - . ID=gene-C9F07_26955;Name=C9F07_26955;end_range=373,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26955;partial=true;start_range=.,1 PYKI01002701.1 Protein Homology CDS 1 373 . - 2 ID=cds-TGD48116.1;Parent=gene-C9F07_26955;Dbxref=NCBI_GP:TGD48116.1;Name=TGD48116.1;end_range=373,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456769.1;locus_tag=C9F07_26955;partial=true;product=hypothetical protein;protein_id=TGD48116.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000594.1 1 373 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000594.1 Genbank region 1 373 . + . ID=PYKI01000594.1:1..373;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000594.1 Genbank gene 1 99 . - . ID=gene-C9F07_05070;Name=C9F07_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05070;partial=true;start_range=.,1 PYKI01000594.1 Protein Homology CDS 1 99 . - 0 ID=cds-TGE14151.1;Parent=gene-C9F07_05070;Dbxref=NCBI_GP:TGE14151.1;Name=TGE14151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457308.1;locus_tag=C9F07_05070;partial=true;product=DeoR family transcriptional regulator;protein_id=TGE14151.1;start_range=.,1;transl_table=11 PYKI01000594.1 Genbank gene 296 373 . + . ID=gene-C9F07_05075;Name=C9F07_05075;end_range=373,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05075;partial=true PYKI01000594.1 Protein Homology CDS 296 373 . + 0 ID=cds-TGE14152.1;Parent=gene-C9F07_05075;Dbxref=NCBI_GP:TGE14152.1;Name=TGE14152.1;end_range=373,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=C9F07_05075;partial=true;product=NAD(P)-dependent oxidoreductase;protein_id=TGE14152.1;transl_table=11 ##sequence-region PYKI01002988.1 1 372 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002988.1 Genbank region 1 372 . + . ID=PYKI01002988.1:1..372;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002988.1 Genbank gene 1 372 . + . ID=gene-C9F07_30000;Name=C9F07_30000;end_range=372,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30000;partial=true;start_range=.,1 PYKI01002988.1 Protein Homology CDS 1 372 . + 2 ID=cds-TGD41374.1;Parent=gene-C9F07_30000;Dbxref=NCBI_GP:TGD41374.1;Name=TGD41374.1;Note=Required for the expression of anaerobic nitric oxide (NO) reductase%3B acts as a transcriptional activator for the norVW operon;end_range=372,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457233.1;locus_tag=C9F07_30000;partial=true;product=nitric oxide reductase transcription regulator;protein_id=TGD41374.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002318.1 1 2945 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002318.1 Genbank region 1 2945 . + . ID=PYKI01002318.1:1..2945;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002318.1 Genbank pseudogene 79 333 . - . ID=gene-C9F07_22725;Name=C9F07_22725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22725;pseudo=true PYKI01002318.1 Protein Homology CDS 79 333 . - 0 ID=cds-C9F07_22725;Parent=gene-C9F07_22725;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014343789.1;locus_tag=C9F07_22725;product=aromatic amino acid transporter AroP;pseudo=true;transl_table=11 PYKI01002318.1 Genbank gene 896 1660 . + . ID=gene-C9F07_22730;Name=C9F07_22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22730 PYKI01002318.1 Protein Homology CDS 896 1660 . + 0 ID=cds-TGD54105.1;Parent=gene-C9F07_22730;Dbxref=NCBI_GP:TGD54105.1;Name=TGD54105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454765.1;locus_tag=C9F07_22730;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=TGD54105.1;transl_table=11 PYKI01002318.1 Genbank gene 1820 2945 . + . ID=gene-C9F07_22735;Name=aceE;end_range=2945,.;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=C9F07_22735;partial=true PYKI01002318.1 Protein Homology CDS 1820 2945 . + 0 ID=cds-TGD54106.1;Parent=gene-C9F07_22735;Dbxref=NCBI_GP:TGD54106.1;Name=TGD54106.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;end_range=2945,.;gbkey=CDS;gene=aceE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454766.1;locus_tag=C9F07_22735;partial=true;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=TGD54106.1;transl_table=11 ##sequence-region PYKI01002254.1 1 6106 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002254.1 Genbank region 1 6106 . + . ID=PYKI01002254.1:1..6106;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002254.1 Genbank gene 33 581 . + . ID=gene-C9F07_22030;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=C9F07_22030 PYKI01002254.1 Protein Homology CDS 33 581 . + 0 ID=cds-TGD55568.1;Parent=gene-C9F07_22030;Dbxref=NCBI_GP:TGD55568.1;Name=TGD55568.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395882.1;locus_tag=C9F07_22030;product=LPS export ABC transporter periplasmic protein LptC;protein_id=TGD55568.1;transl_table=11 PYKI01002254.1 Genbank gene 550 1104 . + . ID=gene-C9F07_22035;Name=C9F07_22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22035 PYKI01002254.1 Protein Homology CDS 550 1104 . + 0 ID=cds-TGD55560.1;Parent=gene-C9F07_22035;Dbxref=NCBI_GP:TGD55560.1;Name=TGD55560.1;Note=LptA%3B periplasmic binding protein part of a putative ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=C9F07_22035;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=TGD55560.1;transl_table=11 PYKI01002254.1 Genbank gene 1111 1836 . + . ID=gene-C9F07_22040;Name=C9F07_22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22040 PYKI01002254.1 Protein Homology CDS 1111 1836 . + 0 ID=cds-TGD55561.1;Parent=gene-C9F07_22040;Dbxref=NCBI_GP:TGD55561.1;Name=TGD55561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=C9F07_22040;product=ABC transporter ATP-binding protein;protein_id=TGD55561.1;transl_table=11 PYKI01002254.1 Genbank gene 1884 3317 . + . ID=gene-C9F07_22045;Name=C9F07_22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22045 PYKI01002254.1 Protein Homology CDS 1884 3317 . + 0 ID=cds-TGD55562.1;Parent=gene-C9F07_22045;Dbxref=NCBI_GP:TGD55562.1;Name=TGD55562.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=C9F07_22045;product=RNA polymerase factor sigma-54;protein_id=TGD55562.1;transl_table=11 PYKI01002254.1 Genbank gene 3340 3627 . + . ID=gene-C9F07_22050;Name=C9F07_22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22050 PYKI01002254.1 Protein Homology CDS 3340 3627 . + 0 ID=cds-TGD55563.1;Parent=gene-C9F07_22050;Dbxref=NCBI_GP:TGD55563.1;Name=TGD55563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007369896.1;locus_tag=C9F07_22050;product=ribosome hibernation promoting factor;protein_id=TGD55563.1;transl_table=11 PYKI01002254.1 Genbank gene 3745 4236 . + . ID=gene-C9F07_22055;Name=C9F07_22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22055 PYKI01002254.1 Protein Homology CDS 3745 4236 . + 0 ID=cds-TGD55564.1;Parent=gene-C9F07_22055;Dbxref=NCBI_GP:TGD55564.1;Name=TGD55564.1;Note=involved in nitrogen metabolism%3B protein IIA is phosphorylated by enzyme I(Ntr);gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457701.1;locus_tag=C9F07_22055;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=TGD55564.1;transl_table=11 PYKI01002254.1 Genbank gene 4282 5136 . + . ID=gene-C9F07_22060;Name=C9F07_22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22060 PYKI01002254.1 Protein Homology CDS 4282 5136 . + 0 ID=cds-TGD55565.1;Parent=gene-C9F07_22060;Dbxref=NCBI_GP:TGD55565.1;Name=TGD55565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121329.1;locus_tag=C9F07_22060;product=RNase adaptor protein RapZ;protein_id=TGD55565.1;transl_table=11 PYKI01002254.1 Genbank gene 5133 5405 . + . ID=gene-C9F07_22065;Name=C9F07_22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22065 PYKI01002254.1 Protein Homology CDS 5133 5405 . + 0 ID=cds-TGD55566.1;Parent=gene-C9F07_22065;Dbxref=NCBI_GP:TGD55566.1;Name=TGD55566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=C9F07_22065;product=HPr family phosphocarrier protein;protein_id=TGD55566.1;transl_table=11 PYKI01002254.1 Genbank pseudogene 5458 5653 . - . ID=gene-C9F07_22070;Name=C9F07_22070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22070;pseudo=true PYKI01002254.1 Protein Homology CDS 5458 5653 . - 0 ID=cds-C9F07_22070;Parent=gene-C9F07_22070;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844637.1;locus_tag=C9F07_22070;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002254.1 Genbank gene 5652 6106 . + . ID=gene-C9F07_22075;Name=C9F07_22075;end_range=6106,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22075;partial=true PYKI01002254.1 Protein Homology CDS 5652 6106 . + 0 ID=cds-TGD55567.1;Parent=gene-C9F07_22075;Dbxref=NCBI_GP:TGD55567.1;Name=TGD55567.1;end_range=6106,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457704.1;locus_tag=C9F07_22075;partial=true;product=hypothetical protein;protein_id=TGD55567.1;transl_table=11 ##sequence-region PYKI01001726.1 1 372 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001726.1 Genbank region 1 372 . + . ID=PYKI01001726.1:1..372;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001726.1 Genbank gene 1 372 . - . ID=gene-C9F07_16490;Name=C9F07_16490;end_range=372,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16490;partial=true;start_range=.,1 PYKI01001726.1 Protein Homology CDS 1 372 . - 0 ID=cds-TGD68884.1;Parent=gene-C9F07_16490;Dbxref=NCBI_GP:TGD68884.1;Name=TGD68884.1;end_range=372,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457397.1;locus_tag=C9F07_16490;partial=true;product=phosphotransferase;protein_id=TGD68884.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001421.1 1 371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001421.1 Genbank region 1 371 . + . ID=PYKI01001421.1:1..371;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001421.1 Genbank gene 1 371 . + . ID=gene-C9F07_13465;Name=C9F07_13465;end_range=371,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13465;partial=true;start_range=.,1 PYKI01001421.1 Protein Homology CDS 1 371 . + 0 ID=cds-TGD83738.1;Parent=gene-C9F07_13465;Dbxref=NCBI_GP:TGD83738.1;Name=TGD83738.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;end_range=371,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=C9F07_13465;partial=true;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=TGD83738.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000701.1 1 371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000701.1 Genbank region 1 371 . + . ID=PYKI01000701.1:1..371;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000701.1 Genbank pseudogene 62 253 . - . ID=gene-C9F07_06150;Name=C9F07_06150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06150;pseudo=true PYKI01000701.1 Protein Homology CDS 62 253 . - 0 ID=cds-C9F07_06150;Parent=gene-C9F07_06150;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456551.1;locus_tag=C9F07_06150;product=DNA (cytosine-5-)-methyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01003266.1 1 371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003266.1 Genbank region 1 371 . + . ID=PYKI01003266.1:1..371;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003266.1 Genbank gene 1 213 . - . ID=gene-C9F07_32835;Name=C9F07_32835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32835;partial=true;start_range=.,1 PYKI01003266.1 Protein Homology CDS 1 213 . - 0 ID=cds-TGD36221.1;Parent=gene-C9F07_32835;Dbxref=NCBI_GP:TGD36221.1;Name=TGD36221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=C9F07_32835;partial=true;product=hypothetical protein;protein_id=TGD36221.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000279.1 1 371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000279.1 Genbank region 1 371 . + . ID=PYKI01000279.1:1..371;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000279.1 Genbank pseudogene 1 371 . + . ID=gene-C9F07_01815;Name=C9F07_01815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01815;pseudo=true PYKI01000279.1 Protein Homology CDS 1 371 . + 2 ID=cds-C9F07_01815;Parent=gene-C9F07_01815;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=C9F07_01815;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001979.1 1 370 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001979.1 Genbank region 1 370 . + . ID=PYKI01001979.1:1..370;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001979.1 Genbank gene 65 370 . - . ID=gene-C9F07_19080;Name=C9F07_19080;end_range=370,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19080;partial=true PYKI01001979.1 Protein Homology CDS 65 370 . - 0 ID=cds-TGD60256.1;Parent=gene-C9F07_19080;Dbxref=NCBI_GP:TGD60256.1;Name=TGD60256.1;end_range=370,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=C9F07_19080;partial=true;product=alpha-ribazole phosphatase;protein_id=TGD60256.1;transl_table=11 ##sequence-region PYKI01000698.1 1 370 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000698.1 Genbank region 1 370 . + . ID=PYKI01000698.1:1..370;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000698.1 Genbank gene 1 370 . - . ID=gene-C9F07_06115;Name=C9F07_06115;end_range=370,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06115;partial=true;start_range=.,1 PYKI01000698.1 Protein Homology CDS 1 370 . - 2 ID=cds-TGE11321.1;Parent=gene-C9F07_06115;Dbxref=NCBI_GP:TGE11321.1;Name=TGE11321.1;end_range=370,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837149.1;locus_tag=C9F07_06115;partial=true;product=hypothetical protein;protein_id=TGE11321.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002417.1 1 369 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002417.1 Genbank region 1 369 . + . ID=PYKI01002417.1:1..369;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002417.1 Genbank gene 1 369 . - . ID=gene-C9F07_23890;Name=C9F07_23890;end_range=369,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23890;partial=true;start_range=.,1 PYKI01002417.1 Protein Homology CDS 1 369 . - 2 ID=cds-TGD51583.1;Parent=gene-C9F07_23890;Dbxref=NCBI_GP:TGD51583.1;Name=TGD51583.1;Note=with HflK inhibits proteolysis of lambda cII protein by FtsH;end_range=369,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458800.1;locus_tag=C9F07_23890;partial=true;product=protease modulator HflC;protein_id=TGD51583.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000052.1 1 369 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000052.1 Genbank region 1 369 . + . ID=PYKI01000052.1:1..369;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000052.1 Genbank gene 29 369 . + . ID=gene-C9F07_00315;Name=C9F07_00315;end_range=369,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00315;partial=true PYKI01000052.1 Protein Homology CDS 29 369 . + 0 ID=cds-TGE30183.1;Parent=gene-C9F07_00315;Dbxref=NCBI_GP:TGE30183.1;Name=TGE30183.1;Note=mediates the export of protein precursors bearing twin-arginine signal peptides;end_range=369,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457777.1;locus_tag=C9F07_00315;partial=true;product=twin-arginine translocase subunit TatB;protein_id=TGE30183.1;transl_table=11 ##sequence-region PYKI01000962.1 1 2939 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000962.1 Genbank region 1 2939 . + . ID=PYKI01000962.1:1..2939;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000962.1 Genbank gene 1 616 . - . ID=gene-C9F07_08780;Name=C9F07_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08780;partial=true;start_range=.,1 PYKI01000962.1 Protein Homology CDS 1 616 . - 0 ID=cds-TGE00853.1;Parent=gene-C9F07_08780;Dbxref=NCBI_GP:TGE00853.1;Name=TGE00853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455959.1;locus_tag=C9F07_08780;partial=true;product=stress protection protein MarC;protein_id=TGE00853.1;start_range=.,1;transl_table=11 PYKI01000962.1 Genbank gene 875 1309 . + . ID=gene-C9F07_08785;Name=C9F07_08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08785 PYKI01000962.1 Protein Homology CDS 875 1309 . + 0 ID=cds-TGE00854.1;Parent=gene-C9F07_08785;Dbxref=NCBI_GP:TGE00854.1;Name=TGE00854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=C9F07_08785;product=MarR family transcriptional regulator;protein_id=TGE00854.1;transl_table=11 PYKI01000962.1 Genbank gene 1278 1712 . + . ID=gene-C9F07_08790;Name=C9F07_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08790 PYKI01000962.1 Protein Homology CDS 1278 1712 . + 0 ID=cds-TGE00855.1;Parent=gene-C9F07_08790;Dbxref=NCBI_GP:TGE00855.1;Name=TGE00855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455961.3;locus_tag=C9F07_08790;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=TGE00855.1;transl_table=11 PYKI01000962.1 Genbank gene 1741 1956 . + . ID=gene-C9F07_08795;Name=C9F07_08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08795 PYKI01000962.1 Protein Homology CDS 1741 1956 . + 0 ID=cds-TGE00857.1;Parent=gene-C9F07_08795;Dbxref=NCBI_GP:TGE00857.1;Name=TGE00857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455962.1;locus_tag=C9F07_08795;product=multiple antibiotic resistance regulatory periplasmic protein MarB;protein_id=TGE00857.1;transl_table=11 PYKI01000962.1 Genbank gene 2074 2939 . - . ID=gene-C9F07_08800;Name=C9F07_08800;end_range=2939,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08800;partial=true PYKI01000962.1 Protein Homology CDS 2074 2939 . - 2 ID=cds-TGE00856.1;Parent=gene-C9F07_08800;Dbxref=NCBI_GP:TGE00856.1;Name=TGE00856.1;end_range=2939,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455963.1;locus_tag=C9F07_08800;partial=true;product=O-acetylserine/cysteine exporter;protein_id=TGE00856.1;transl_table=11 ##sequence-region PYKI01002998.1 1 368 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002998.1 Genbank region 1 368 . + . ID=PYKI01002998.1:1..368;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002998.1 Genbank gene 1 368 . - . ID=gene-C9F07_30075;Name=ompS1;end_range=368,.;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=C9F07_30075;partial=true;start_range=.,1 PYKI01002998.1 Protein Homology CDS 1 368 . - 2 ID=cds-TGD41264.1;Parent=gene-C9F07_30075;Dbxref=NCBI_GP:TGD41264.1;Name=TGD41264.1;end_range=368,.;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456554.1;locus_tag=C9F07_30075;partial=true;product=porin OmpS1;protein_id=TGD41264.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000252.1 1 368 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000252.1 Genbank region 1 368 . + . ID=PYKI01000252.1:1..368;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000252.1 Genbank pseudogene 1 300 . - . ID=gene-C9F07_01645;Name=C9F07_01645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01645;pseudo=true PYKI01000252.1 Protein Homology CDS 1 300 . - 0 ID=cds-C9F07_01645;Parent=gene-C9F07_01645;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457732.1;locus_tag=C9F07_01645;product=cation transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01002784.1 1 368 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002784.1 Genbank region 1 368 . + . ID=PYKI01002784.1:1..368;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002784.1 Genbank gene 1 368 . + . ID=gene-C9F07_27830;Name=C9F07_27830;end_range=368,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27830;partial=true;start_range=.,1 PYKI01002784.1 Protein Homology CDS 1 368 . + 2 ID=cds-TGD46177.1;Parent=gene-C9F07_27830;Dbxref=NCBI_GP:TGD46177.1;Name=TGD46177.1;end_range=368,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456328.1;locus_tag=C9F07_27830;partial=true;product=ATP-dependent helicase;protein_id=TGD46177.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000361.1 1 367 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000361.1 Genbank region 1 367 . + . ID=PYKI01000361.1:1..367;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000361.1 Genbank gene 1 367 . - . ID=gene-C9F07_02725;Name=C9F07_02725;end_range=367,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02725;partial=true;start_range=.,1 PYKI01000361.1 Protein Homology CDS 1 367 . - 2 ID=cds-TGE23195.1;Parent=gene-C9F07_02725;Dbxref=NCBI_GP:TGE23195.1;Name=TGE23195.1;end_range=367,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458342.1;locus_tag=C9F07_02725;partial=true;product=hypothetical protein;protein_id=TGE23195.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003003.1 1 367 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003003.1 Genbank region 1 367 . + . ID=PYKI01003003.1:1..367;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003003.1 Genbank pseudogene 210 293 . + . ID=gene-C9F07_30105;Name=C9F07_30105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30105;pseudo=true PYKI01003003.1 Protein Homology CDS 210 293 . + 0 ID=cds-C9F07_30105;Parent=gene-C9F07_30105;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=C9F07_30105;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01000803.1 1 367 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000803.1 Genbank region 1 367 . + . ID=PYKI01000803.1:1..367;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000803.1 Genbank gene 1 367 . + . ID=gene-C9F07_07235;Name=C9F07_07235;end_range=367,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07235;partial=true;start_range=.,1 PYKI01000803.1 Protein Homology CDS 1 367 . + 1 ID=cds-TGE09133.1;Parent=gene-C9F07_07235;Dbxref=NCBI_GP:TGE09133.1;Name=TGE09133.1;end_range=367,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458245.1;locus_tag=C9F07_07235;partial=true;product=ROK family protein;protein_id=TGE09133.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001040.1 1 367 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001040.1 Genbank region 1 367 . + . ID=PYKI01001040.1:1..367;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001040.1 Genbank pseudogene 74 367 . - . ID=gene-C9F07_09575;Name=C9F07_09575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09575;pseudo=true PYKI01001040.1 Protein Homology CDS 74 367 . - 0 ID=cds-C9F07_09575;Parent=gene-C9F07_09575;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455423.1;locus_tag=C9F07_09575;product=NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 ##sequence-region PYKI01000005.1 1 366 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000005.1 Genbank region 1 366 . + . ID=PYKI01000005.1:1..366;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000005.1 Genbank gene 1 170 . + . ID=gene-C9F07_00030;Name=C9F07_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00030;partial=true;start_range=.,1 PYKI01000005.1 Protein Homology CDS 1 170 . + 2 ID=cds-TGE30223.1;Parent=gene-C9F07_00030;Dbxref=NCBI_GP:TGE30223.1;Name=TGE30223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458989.1;locus_tag=C9F07_00030;partial=true;product=elongation factor 3;protein_id=TGE30223.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001130.1 1 2936 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001130.1 Genbank region 1 2936 . + . ID=PYKI01001130.1:1..2936;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001130.1 Genbank gene 1 507 . - . ID=gene-C9F07_10535;Name=C9F07_10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10535;partial=true;start_range=.,1 PYKI01001130.1 Protein Homology CDS 1 507 . - 0 ID=cds-TGD94692.1;Parent=gene-C9F07_10535;Dbxref=NCBI_GP:TGD94692.1;Name=TGD94692.1;Note=periplasmic substrate-binding component of the ATP-dependent ribose transport system;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458059.1;locus_tag=C9F07_10535;partial=true;product=D-ribose ABC transporter substrate-binding protein;protein_id=TGD94692.1;start_range=.,1;transl_table=11 PYKI01001130.1 Genbank gene 532 1497 . - . ID=gene-C9F07_10540;Name=C9F07_10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10540 PYKI01001130.1 Protein Homology CDS 532 1497 . - 0 ID=cds-TGD94693.1;Parent=gene-C9F07_10540;Dbxref=NCBI_GP:TGD94693.1;Name=TGD94693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=C9F07_10540;product=ribose ABC transporter permease;protein_id=TGD94693.1;transl_table=11 PYKI01001130.1 Genbank gene 1503 2936 . - . ID=gene-C9F07_10545;Name=C9F07_10545;end_range=2936,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10545;partial=true PYKI01001130.1 Protein Homology CDS 1503 2936 . - 0 ID=cds-TGD94694.1;Parent=gene-C9F07_10545;Dbxref=NCBI_GP:TGD94694.1;Name=TGD94694.1;end_range=2936,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=C9F07_10545;partial=true;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=TGD94694.1;transl_table=11 ##sequence-region PYKI01003328.1 1 366 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003328.1 Genbank region 1 366 . + . ID=PYKI01003328.1:1..366;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003328.1 Genbank gene 1 366 . + . ID=gene-C9F07_33475;Name=C9F07_33475;end_range=366,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33475;partial=true;start_range=.,1 PYKI01003328.1 Protein Homology CDS 1 366 . + 2 ID=cds-TGD35917.1;Parent=gene-C9F07_33475;Dbxref=NCBI_GP:TGD35917.1;Name=TGD35917.1;end_range=366,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=C9F07_33475;partial=true;product=MFS transporter;protein_id=TGD35917.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002210.1 1 365 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002210.1 Genbank region 1 365 . + . ID=PYKI01002210.1:1..365;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002210.1 Genbank gene 143 365 . + . ID=gene-C9F07_21515;Name=C9F07_21515;end_range=365,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21515;partial=true PYKI01002210.1 Protein Homology CDS 143 365 . + 0 ID=cds-TGD56501.1;Parent=gene-C9F07_21515;Dbxref=NCBI_GP:TGD56501.1;Name=TGD56501.1;end_range=365,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458245.1;locus_tag=C9F07_21515;partial=true;product=ROK family protein;protein_id=TGD56501.1;transl_table=11 ##sequence-region PYKI01001439.1 1 365 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001439.1 Genbank region 1 365 . + . ID=PYKI01001439.1:1..365;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001439.1 Genbank gene 1 365 . - . ID=gene-C9F07_13615;Name=C9F07_13615;end_range=365,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13615;partial=true;start_range=.,1 PYKI01001439.1 Protein Homology CDS 1 365 . - 1 ID=cds-TGD83695.1;Parent=gene-C9F07_13615;Dbxref=NCBI_GP:TGD83695.1;Name=TGD83695.1;end_range=365,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455228.1;locus_tag=C9F07_13615;partial=true;product=hypothetical protein;protein_id=TGD83695.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001035.1 1 365 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001035.1 Genbank region 1 365 . + . ID=PYKI01001035.1:1..365;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001035.1 Genbank gene 1 364 . + . ID=gene-C9F07_09540;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=C9F07_09540;partial=true;start_range=.,1 PYKI01001035.1 Protein Homology CDS 1 364 . + 1 ID=cds-TGD96874.1;Parent=gene-C9F07_09540;Dbxref=NCBI_GP:TGD96874.1;Name=TGD96874.1;Note=catalyzes the formation of 5-dehydro-4-deoxy-D-glucarate from D-galactarate;gbkey=CDS;gene=garD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020238933.1;locus_tag=C9F07_09540;partial=true;product=galactarate dehydratase;protein_id=TGD96874.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002793.1 1 364 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002793.1 Genbank region 1 364 . + . ID=PYKI01002793.1:1..364;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002793.1 Genbank gene 1 364 . + . ID=gene-C9F07_27920;Name=thiP;end_range=364,.;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;gene_synonym=sfuB;locus_tag=C9F07_27920;partial=true;start_range=.,1 PYKI01002793.1 Protein Homology CDS 1 364 . + 2 ID=cds-TGD46009.1;Parent=gene-C9F07_27920;Dbxref=NCBI_GP:TGD46009.1;Name=TGD46009.1;Note=permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine;end_range=364,.;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454719.1;locus_tag=C9F07_27920;partial=true;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=TGD46009.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001152.1 1 364 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001152.1 Genbank region 1 364 . + . ID=PYKI01001152.1:1..364;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001152.1 Genbank gene 1 364 . - . ID=gene-C9F07_10765;Name=C9F07_10765;end_range=364,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10765;partial=true;start_range=.,1 PYKI01001152.1 Protein Homology CDS 1 364 . - 0 ID=cds-TGD93583.1;Parent=gene-C9F07_10765;Dbxref=NCBI_GP:TGD93583.1;Name=TGD93583.1;end_range=364,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456939.1;locus_tag=C9F07_10765;partial=true;product=histidine kinase;protein_id=TGD93583.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003050.1 1 363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003050.1 Genbank region 1 363 . + . ID=PYKI01003050.1:1..363;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003050.1 Genbank gene 1 293 . - . ID=gene-C9F07_30600;Name=C9F07_30600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30600;partial=true;start_range=.,1 PYKI01003050.1 Protein Homology CDS 1 293 . - 0 ID=cds-TGD41005.1;Parent=gene-C9F07_30600;Dbxref=NCBI_GP:TGD41005.1;Name=TGD41005.1;Note=carboxysome structural protein involved in ethanolamine utilization;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456991.1;locus_tag=C9F07_30600;partial=true;product=microcompartment protein EutL;protein_id=TGD41005.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001039.1 1 363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001039.1 Genbank region 1 363 . + . ID=PYKI01001039.1:1..363;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001039.1 Genbank gene 1 363 . + . ID=gene-C9F07_09570;Name=C9F07_09570;end_range=363,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09570;partial=true;start_range=.,1 PYKI01001039.1 Protein Homology CDS 1 363 . + 2 ID=cds-TGD96846.1;Parent=gene-C9F07_09570;Dbxref=NCBI_GP:TGD96846.1;Name=TGD96846.1;end_range=363,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528005.1;locus_tag=C9F07_09570;partial=true;product=DUF4459 domain-containing protein;protein_id=TGD96846.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002868.1 1 362 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002868.1 Genbank region 1 362 . + . ID=PYKI01002868.1:1..362;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002868.1 Genbank gene 1 362 . + . ID=gene-C9F07_28735;Name=C9F07_28735;end_range=362,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28735;partial=true;start_range=.,1 PYKI01002868.1 Protein Homology CDS 1 362 . + 2 ID=cds-TGD44950.1;Parent=gene-C9F07_28735;Dbxref=NCBI_GP:TGD44950.1;Name=TGD44950.1;end_range=362,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458049.1;locus_tag=C9F07_28735;partial=true;product=DNA polymerase I;protein_id=TGD44950.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001673.1 1 2933 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001673.1 Genbank region 1 2933 . + . ID=PYKI01001673.1:1..2933;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001673.1 Genbank gene 1 207 . - . ID=gene-C9F07_15970;Name=C9F07_15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15970;partial=true;start_range=.,1 PYKI01001673.1 Protein Homology CDS 1 207 . - 0 ID=cds-TGD70100.1;Parent=gene-C9F07_15970;Dbxref=NCBI_GP:TGD70100.1;Name=TGD70100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=C9F07_15970;partial=true;product=hypothetical protein;protein_id=TGD70100.1;start_range=.,1;transl_table=11 PYKI01001673.1 Genbank pseudogene 287 1327 . + . ID=gene-C9F07_15975;Name=C9F07_15975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15975;pseudo=true PYKI01001673.1 Protein Homology CDS 287 1327 . + 0 ID=cds-C9F07_15975;Parent=gene-C9F07_15975;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458116.1;locus_tag=C9F07_15975;product=TMAO reductase system periplasmic protein TorT;pseudo=true;transl_table=11 PYKI01001673.1 Genbank gene 1300 1992 . - . ID=gene-C9F07_15980;Name=C9F07_15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15980 PYKI01001673.1 Protein Homology CDS 1300 1992 . - 0 ID=cds-TGD70102.1;Parent=gene-C9F07_15980;Dbxref=NCBI_GP:TGD70102.1;Name=TGD70102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=C9F07_15980;product=two-component system response regulator TorR;protein_id=TGD70102.1;transl_table=11 PYKI01001673.1 Genbank gene 2122 2933 . + . ID=gene-C9F07_15985;Name=C9F07_15985;end_range=2933,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15985;partial=true PYKI01001673.1 Protein Homology CDS 2122 2933 . + 0 ID=cds-TGD70101.1;Parent=gene-C9F07_15985;Dbxref=NCBI_GP:TGD70101.1;Name=TGD70101.1;end_range=2933,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=C9F07_15985;partial=true;product=pentaheme c-type cytochrome TorC;protein_id=TGD70101.1;transl_table=11 ##sequence-region PYKI01003059.1 1 362 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003059.1 Genbank region 1 362 . + . ID=PYKI01003059.1:1..362;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003059.1 Genbank gene 1 362 . - . ID=gene-C9F07_30680;Name=C9F07_30680;end_range=362,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30680;partial=true;start_range=.,1 PYKI01003059.1 Protein Homology CDS 1 362 . - 2 ID=cds-TGD40971.1;Parent=gene-C9F07_30680;Dbxref=NCBI_GP:TGD40971.1;Name=TGD40971.1;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;end_range=362,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457119.1;locus_tag=C9F07_30680;partial=true;product=ATP-dependent RNA helicase SrmB;protein_id=TGD40971.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000065.1 1 362 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000065.1 Genbank region 1 362 . + . ID=PYKI01000065.1:1..362;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000065.1 Genbank pseudogene 31 204 . + . ID=gene-C9F07_00400;Name=C9F07_00400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00400;pseudo=true PYKI01000065.1 Protein Homology CDS 31 204 . + 0 ID=cds-C9F07_00400;Parent=gene-C9F07_00400;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455790.1;locus_tag=C9F07_00400;product=orotidine-5'-phosphate decarboxylase;pseudo=true;transl_table=11 PYKI01000065.1 Genbank pseudogene 204 290 . + . ID=gene-C9F07_00405;Name=C9F07_00405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00405;pseudo=true PYKI01000065.1 Protein Homology CDS 204 290 . + 0 ID=cds-C9F07_00405;Parent=gene-C9F07_00405;Note=involved in start site selection during the initiation of translation%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455791.1;locus_tag=C9F07_00405;product=stress response translation initiation inhibitor YciH;pseudo=true;transl_table=11 ##sequence-region PYKI01000165.1 1 362 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000165.1 Genbank region 1 362 . + . ID=PYKI01000165.1:1..362;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000165.1 Genbank gene 1 217 . + . ID=gene-C9F07_01120;Name=C9F07_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01120;partial=true;start_range=.,1 PYKI01000165.1 Protein Homology CDS 1 217 . + 1 ID=cds-TGE30064.1;Parent=gene-C9F07_01120;Dbxref=NCBI_GP:TGE30064.1;Name=TGE30064.1;Note=catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=C9F07_01120;partial=true;product=glycine C-acetyltransferase;protein_id=TGE30064.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003481.1 1 362 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003481.1 Genbank region 1 362 . + . ID=PYKI01003481.1:1..362;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003481.1 Genbank pseudogene 68 362 . - . ID=gene-C9F07_35030;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=pseudogene;locus_tag=C9F07_35030;pseudo=true PYKI01003481.1 Protein Homology CDS 68 362 . - 1 ID=cds-C9F07_35030;Parent=gene-C9F07_35030;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458800.1;locus_tag=C9F07_35030;product=protease modulator HflC;pseudo=true;transl_table=11 ##sequence-region PYKI01002633.1 1 362 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002633.1 Genbank region 1 362 . + . ID=PYKI01002633.1:1..362;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002633.1 Genbank gene 1 362 . + . ID=gene-C9F07_26210;Name=C9F07_26210;end_range=362,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26210;partial=true;start_range=.,1 PYKI01002633.1 Protein Homology CDS 1 362 . + 2 ID=cds-TGD49446.1;Parent=gene-C9F07_26210;Dbxref=NCBI_GP:TGD49446.1;Name=TGD49446.1;end_range=362,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457725.1;locus_tag=C9F07_26210;partial=true;product=serine endoprotease DegQ;protein_id=TGD49446.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002813.1 1 361 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002813.1 Genbank region 1 361 . + . ID=PYKI01002813.1:1..361;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002813.1 Genbank gene 117 192 . - . ID=gene-C9F07_28170;Name=C9F07_28170;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_28170 PYKI01002813.1 tRNAscan-SE tRNA 117 192 . - . ID=rna-C9F07_28170;Parent=gene-C9F07_28170;anticodon=(pos:complement(157..159));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_28170;product=tRNA-Met PYKI01002813.1 tRNAscan-SE exon 117 192 . - . ID=exon-C9F07_28170-1;Parent=rna-C9F07_28170;anticodon=(pos:complement(157..159));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_28170;product=tRNA-Met ##sequence-region PYKI01001085.1 1 361 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001085.1 Genbank region 1 361 . + . ID=PYKI01001085.1:1..361;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001085.1 Genbank gene 1 353 . - . ID=gene-C9F07_10115;Name=C9F07_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10115;partial=true;start_range=.,1 PYKI01001085.1 Protein Homology CDS 1 353 . - 0 ID=cds-TGD95567.1;Parent=gene-C9F07_10115;Dbxref=NCBI_GP:TGD95567.1;Name=TGD95567.1;Note=catalyzes the formation of cyclic di-3'%2C5'-guanylate from guanosine triphosphate%3B involved in the regulation of cellulose biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456547.1;locus_tag=C9F07_10115;partial=true;product=cellulose biosynthesis regulator YedQ;protein_id=TGD95567.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002565.1 1 360 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002565.1 Genbank region 1 360 . + . ID=PYKI01002565.1:1..360;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002565.1 Genbank gene 1 360 . + . ID=gene-C9F07_25470;Name=hycD;end_range=360,.;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=C9F07_25470;partial=true;start_range=.,1 PYKI01002565.1 Protein Homology CDS 1 360 . + 1 ID=cds-TGD49826.1;Parent=gene-C9F07_25470;Dbxref=NCBI_GP:TGD49826.1;Name=TGD49826.1;Note=formate hydrogenlyase subunit 4%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide;end_range=360,.;gbkey=CDS;gene=hycD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457244.1;locus_tag=C9F07_25470;partial=true;product=hydrogenase 3 membrane subunit;protein_id=TGD49826.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002613.1 1 360 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002613.1 Genbank region 1 360 . + . ID=PYKI01002613.1:1..360;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002613.1 Genbank gene 70 360 . - . ID=gene-C9F07_25990;Name=C9F07_25990;end_range=360,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25990;partial=true PYKI01002613.1 Protein Homology CDS 70 360 . - 0 ID=cds-TGD49551.1;Parent=gene-C9F07_25990;Dbxref=NCBI_GP:TGD49551.1;Name=TGD49551.1;end_range=360,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455901.1;locus_tag=C9F07_25990;partial=true;product=virulence effector SrfC;protein_id=TGD49551.1;transl_table=11 ##sequence-region PYKI01003307.1 1 360 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003307.1 Genbank region 1 360 . + . ID=PYKI01003307.1:1..360;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003307.1 Genbank gene 31 237 . - . ID=gene-C9F07_33260;Name=C9F07_33260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33260 PYKI01003307.1 Protein Homology CDS 31 237 . - 0 ID=cds-TGD36019.1;Parent=gene-C9F07_33260;Dbxref=NCBI_GP:TGD36019.1;Name=TGD36019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210534.1;locus_tag=C9F07_33260;product=hypothetical protein;protein_id=TGD36019.1;transl_table=11 PYKI01003307.1 Genbank gene 207 305 . + . ID=gene-C9F07_33265;Name=C9F07_33265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33265 PYKI01003307.1 Protein Homology CDS 207 305 . + 0 ID=cds-TGD36020.1;Parent=gene-C9F07_33265;Dbxref=NCBI_GP:TGD36020.1;Name=TGD36020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521503.1;locus_tag=C9F07_33265;product=aldo/keto reductase;protein_id=TGD36020.1;transl_table=11 ##sequence-region PYKI01001243.1 1 2931 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001243.1 Genbank region 1 2931 . + . ID=PYKI01001243.1:1..2931;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001243.1 Genbank gene 1 909 . - . ID=gene-C9F07_11590;Name=C9F07_11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11590;partial=true;start_range=.,1 PYKI01001243.1 Protein Homology CDS 1 909 . - 0 ID=cds-TGD90249.1;Parent=gene-C9F07_11590;Dbxref=NCBI_GP:TGD90249.1;Name=TGD90249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=C9F07_11590;partial=true;product=LysR family transcriptional regulator;protein_id=TGD90249.1;start_range=.,1;transl_table=11 PYKI01001243.1 Genbank gene 1012 2400 . + . ID=gene-C9F07_11595;Name=C9F07_11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11595 PYKI01001243.1 Protein Homology CDS 1012 2400 . + 0 ID=cds-TGD90248.1;Parent=gene-C9F07_11595;Dbxref=NCBI_GP:TGD90248.1;Name=TGD90248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=C9F07_11595;product=succinate-semialdehyde dehydrogenase;protein_id=TGD90248.1;transl_table=11 PYKI01001243.1 Genbank pseudogene 2473 2925 . + . ID=gene-C9F07_11600;Name=C9F07_11600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11600;pseudo=true PYKI01001243.1 Protein Homology CDS 2473 2925 . + 0 ID=cds-C9F07_11600;Parent=gene-C9F07_11600;Note=catalyzes the formation of glutamate from glutamine%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=C9F07_11600;product=glutaminase;pseudo=true;transl_table=11 ##sequence-region PYKI01001569.1 1 359 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001569.1 Genbank region 1 359 . + . ID=PYKI01001569.1:1..359;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001569.1 Genbank pseudogene 94 359 . + . ID=gene-C9F07_15020;Name=C9F07_15020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15020;pseudo=true PYKI01001569.1 Protein Homology CDS 94 359 . + 0 ID=cds-C9F07_15020;Parent=gene-C9F07_15020;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457815.1;locus_tag=C9F07_15020;product=uroporphyrinogen-III C-methyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01003388.1 1 358 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003388.1 Genbank region 1 358 . + . ID=PYKI01003388.1:1..358;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003388.1 Genbank gene 1 358 . + . ID=gene-C9F07_34090;Name=proY;end_range=358,.;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=C9F07_34090;partial=true;start_range=.,1 PYKI01003388.1 Protein Homology CDS 1 358 . + 1 ID=cds-TGD34156.1;Parent=gene-C9F07_34090;Dbxref=NCBI_GP:TGD34156.1;Name=TGD34156.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;end_range=358,.;gbkey=CDS;gene=proY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454995.1;locus_tag=C9F07_34090;partial=true;product=proline-specific permease ProY;protein_id=TGD34156.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001417.1 1 358 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001417.1 Genbank region 1 358 . + . ID=PYKI01001417.1:1..358;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001417.1 Genbank gene 1 77 . + . ID=gene-C9F07_13435;Name=C9F07_13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13435;partial=true;start_range=.,1 PYKI01001417.1 Protein Homology CDS 1 77 . + 2 ID=cds-TGD83765.1;Parent=gene-C9F07_13435;Dbxref=NCBI_GP:TGD83765.1;Name=TGD83765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461627.1;locus_tag=C9F07_13435;partial=true;product=phage tail assembly protein;protein_id=TGD83765.1;start_range=.,1;transl_table=11 PYKI01001417.1 Genbank gene 92 211 . + . ID=gene-C9F07_13440;Name=C9F07_13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13440 PYKI01001417.1 Protein Homology CDS 92 211 . + 0 ID=cds-TGD83764.1;Parent=gene-C9F07_13440;Dbxref=NCBI_GP:TGD83764.1;Name=TGD83764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461626.1;locus_tag=C9F07_13440;product=GpE family phage tail protein;protein_id=TGD83764.1;transl_table=11 ##sequence-region PYKI01001465.1 1 358 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001465.1 Genbank region 1 358 . + . ID=PYKI01001465.1:1..358;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001465.1 Genbank gene 1 358 . - . ID=gene-C9F07_13895;Name=C9F07_13895;end_range=358,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13895;partial=true;start_range=.,1 PYKI01001465.1 Protein Homology CDS 1 358 . - 1 ID=cds-TGD81942.1;Parent=gene-C9F07_13895;Dbxref=NCBI_GP:TGD81942.1;Name=TGD81942.1;end_range=358,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=C9F07_13895;partial=true;product=multidrug transporter subunit MdtA;protein_id=TGD81942.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003285.1 1 357 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003285.1 Genbank region 1 357 . + . ID=PYKI01003285.1:1..357;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003285.1 Genbank gene 1 188 . + . ID=gene-C9F07_33045;Name=C9F07_33045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33045;partial=true;start_range=.,1 PYKI01003285.1 Protein Homology CDS 1 188 . + 2 ID=cds-TGD36125.1;Parent=gene-C9F07_33045;Dbxref=NCBI_GP:TGD36125.1;Name=TGD36125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=C9F07_33045;partial=true;product=transcriptional regulator;protein_id=TGD36125.1;start_range=.,1;transl_table=11 PYKI01003285.1 Genbank gene 198 357 . + . ID=gene-C9F07_33050;Name=C9F07_33050;end_range=357,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33050;partial=true PYKI01003285.1 Protein Homology CDS 198 357 . + 0 ID=cds-TGD36126.1;Parent=gene-C9F07_33050;Dbxref=NCBI_GP:TGD36126.1;Name=TGD36126.1;end_range=357,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457196.1;locus_tag=C9F07_33050;partial=true;product=sulfurtransferase;protein_id=TGD36126.1;transl_table=11 ##sequence-region PYKI01000242.1 1 357 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000242.1 Genbank region 1 357 . + . ID=PYKI01000242.1:1..357;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000242.1 Genbank gene 73 147 . - . ID=gene-C9F07_01585;Name=C9F07_01585;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_01585 PYKI01000242.1 tRNAscan-SE tRNA 73 147 . - . ID=rna-C9F07_01585;Parent=gene-C9F07_01585;anticodon=(pos:complement(112..114));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_01585;product=tRNA-Gly PYKI01000242.1 tRNAscan-SE exon 73 147 . - . ID=exon-C9F07_01585-1;Parent=rna-C9F07_01585;anticodon=(pos:complement(112..114));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_01585;product=tRNA-Gly PYKI01000242.1 Genbank gene 264 348 . - . ID=gene-C9F07_01590;Name=C9F07_01590;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_01590 PYKI01000242.1 tRNAscan-SE tRNA 264 348 . - . ID=rna-C9F07_01590;Parent=gene-C9F07_01590;anticodon=(pos:complement(312..314));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_01590;product=tRNA-Tyr PYKI01000242.1 tRNAscan-SE exon 264 348 . - . ID=exon-C9F07_01590-1;Parent=rna-C9F07_01590;anticodon=(pos:complement(312..314));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_01590;product=tRNA-Tyr ##sequence-region PYKI01000542.1 1 357 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000542.1 Genbank region 1 357 . + . ID=PYKI01000542.1:1..357;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000542.1 Genbank gene 1 357 . + . ID=gene-C9F07_04500;Name=C9F07_04500;end_range=357,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04500;partial=true;start_range=.,1 PYKI01000542.1 Protein Homology CDS 1 357 . + 1 ID=cds-TGE15524.1;Parent=gene-C9F07_04500;Dbxref=NCBI_GP:TGE15524.1;Name=TGE15524.1;end_range=357,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=C9F07_04500;partial=true;product=acetylesterase;protein_id=TGE15524.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000604.1 1 357 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000604.1 Genbank region 1 357 . + . ID=PYKI01000604.1:1..357;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000604.1 Genbank gene 1 357 . - . ID=gene-C9F07_05165;Name=C9F07_05165;end_range=357,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05165;partial=true;start_range=.,1 PYKI01000604.1 Protein Homology CDS 1 357 . - 1 ID=cds-TGE13995.1;Parent=gene-C9F07_05165;Dbxref=NCBI_GP:TGE13995.1;Name=TGE13995.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;end_range=357,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475716.1;locus_tag=C9F07_05165;partial=true;product=PTS glucose transporter subunit IIBC;protein_id=TGE13995.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001722.1 1 357 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001722.1 Genbank region 1 357 . + . ID=PYKI01001722.1:1..357;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001722.1 Genbank gene 1 357 . - . ID=gene-C9F07_16470;Name=C9F07_16470;end_range=357,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16470;partial=true;start_range=.,1 PYKI01001722.1 Protein Homology CDS 1 357 . - 0 ID=cds-TGD68890.1;Parent=gene-C9F07_16470;Dbxref=NCBI_GP:TGD68890.1;Name=TGD68890.1;end_range=357,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456948.1;locus_tag=C9F07_16470;partial=true;product=pyruvate decarboxylase;protein_id=TGD68890.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000127.1 1 357 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000127.1 Genbank region 1 357 . + . ID=PYKI01000127.1:1..357;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000127.1 Genbank pseudogene 19 191 . - . ID=gene-C9F07_00855;Name=C9F07_00855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00855;pseudo=true PYKI01000127.1 Protein Homology CDS 19 191 . - 0 ID=cds-C9F07_00855;Parent=gene-C9F07_00855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297405.1;locus_tag=C9F07_00855;product=adenine glycosylase;pseudo=true;transl_table=11 PYKI01000127.1 Genbank gene 253 357 . + . ID=gene-C9F07_00860;Name=C9F07_00860;end_range=357,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00860;partial=true PYKI01000127.1 Protein Homology CDS 253 357 . + 0 ID=cds-TGE30100.1;Parent=gene-C9F07_00860;Dbxref=NCBI_GP:TGE30100.1;Name=TGE30100.1;end_range=357,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311863.1;locus_tag=C9F07_00860;partial=true;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=TGE30100.1;transl_table=11 ##sequence-region PYKI01002968.1 1 2928 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002968.1 Genbank region 1 2928 . + . ID=PYKI01002968.1:1..2928;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002968.1 Genbank gene 1 723 . + . ID=gene-C9F07_29745;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=C9F07_29745;partial=true;start_range=.,1 PYKI01002968.1 Protein Homology CDS 1 723 . + 0 ID=cds-TGD41721.1;Parent=gene-C9F07_29745;Dbxref=NCBI_GP:TGD41721.1;Name=TGD41721.1;Note=catalyzes the formate-dependent reduction of nitrite to ammonia%3B cytochrome C552;gbkey=CDS;gene=nrfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=C9F07_29745;partial=true;product=ammonia-forming cytochrome c nitrite reductase subunit c552;protein_id=TGD41721.1;start_range=.,1;transl_table=11 PYKI01002968.1 Genbank gene 835 1401 . + . ID=gene-C9F07_29750;Name=C9F07_29750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29750 PYKI01002968.1 Protein Homology CDS 835 1401 . + 0 ID=cds-TGD41722.1;Parent=gene-C9F07_29750;Dbxref=NCBI_GP:TGD41722.1;Name=TGD41722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458576.1;locus_tag=C9F07_29750;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=TGD41722.1;transl_table=11 PYKI01002968.1 Genbank gene 1398 2069 . + . ID=gene-C9F07_29755;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=C9F07_29755 PYKI01002968.1 Protein Homology CDS 1398 2069 . + 0 ID=cds-TGD41723.1;Parent=gene-C9F07_29755;Dbxref=NCBI_GP:TGD41723.1;Name=TGD41723.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=C9F07_29755;product=cytochrome c nitrite reductase Fe-S protein;protein_id=TGD41723.1;transl_table=11 PYKI01002968.1 Genbank gene 2066 2928 . + . ID=gene-C9F07_29760;Name=nrfD;end_range=2928,.;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=C9F07_29760;partial=true PYKI01002968.1 Protein Homology CDS 2066 2928 . + 0 ID=cds-TGD41724.1;Parent=gene-C9F07_29760;Dbxref=NCBI_GP:TGD41724.1;Name=TGD41724.1;end_range=2928,.;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=C9F07_29760;partial=true;product=cytochrome c nitrite reductase subunit NrfD;protein_id=TGD41724.1;transl_table=11 ##sequence-region PYKI01001470.1 1 356 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001470.1 Genbank region 1 356 . + . ID=PYKI01001470.1:1..356;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001470.1 Genbank gene 1 124 . + . ID=gene-C9F07_13935;Name=C9F07_13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13935;partial=true;start_range=.,1 PYKI01001470.1 Protein Homology CDS 1 124 . + 1 ID=cds-TGD81032.1;Parent=gene-C9F07_13935;Dbxref=NCBI_GP:TGD81032.1;Name=TGD81032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=C9F07_13935;partial=true;product=oligopeptidase A;protein_id=TGD81032.1;start_range=.,1;transl_table=11 PYKI01001470.1 Genbank gene 131 356 . + . ID=gene-C9F07_13940;Name=C9F07_13940;end_range=356,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13940;partial=true PYKI01001470.1 Protein Homology CDS 131 356 . + 0 ID=cds-TGD81033.1;Parent=gene-C9F07_13940;Dbxref=NCBI_GP:TGD81033.1;Name=TGD81033.1;Note=predicted SAM-dependent methyltransferase;end_range=356,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458324.1;locus_tag=C9F07_13940;partial=true;product=16S rRNA (guanine(1516)-N(2))-methyltransferase;protein_id=TGD81033.1;transl_table=11 ##sequence-region PYKI01002663.1 1 356 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002663.1 Genbank region 1 356 . + . ID=PYKI01002663.1:1..356;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002663.1 Genbank pseudogene 60 356 . + . ID=gene-C9F07_26525;Name=C9F07_26525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26525;pseudo=true PYKI01002663.1 Protein Homology CDS 60 356 . + 0 ID=cds-C9F07_26525;Parent=gene-C9F07_26525;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458336.1;locus_tag=C9F07_26525;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002305.1 1 355 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002305.1 Genbank region 1 355 . + . ID=PYKI01002305.1:1..355;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002305.1 Genbank gene 1 355 . + . ID=gene-C9F07_22600;Name=C9F07_22600;end_range=355,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22600;partial=true;start_range=.,1 PYKI01002305.1 Protein Homology CDS 1 355 . + 1 ID=cds-TGD54383.1;Parent=gene-C9F07_22600;Dbxref=NCBI_GP:TGD54383.1;Name=TGD54383.1;end_range=355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456254.1;locus_tag=C9F07_22600;partial=true;product=peptide ABC transporter permease;protein_id=TGD54383.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000628.1 1 355 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000628.1 Genbank region 1 355 . + . ID=PYKI01000628.1:1..355;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000628.1 Genbank gene 1 355 . - . ID=gene-C9F07_05420;Name=C9F07_05420;end_range=355,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05420;partial=true;start_range=.,1 PYKI01000628.1 Protein Homology CDS 1 355 . - 2 ID=cds-TGE13416.1;Parent=gene-C9F07_05420;Dbxref=NCBI_GP:TGE13416.1;Name=TGE13416.1;end_range=355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576082.1;locus_tag=C9F07_05420;partial=true;product=class I SAM-dependent methyltransferase;protein_id=TGE13416.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001996.1 1 355 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001996.1 Genbank region 1 355 . + . ID=PYKI01001996.1:1..355;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001996.1 Genbank gene 1 355 . - . ID=gene-C9F07_19255;Name=C9F07_19255;end_range=355,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19255;partial=true;start_range=.,1 PYKI01001996.1 Protein Homology CDS 1 355 . - 2 ID=cds-TGD60170.1;Parent=gene-C9F07_19255;Dbxref=NCBI_GP:TGD60170.1;Name=TGD60170.1;end_range=355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461134.1;locus_tag=C9F07_19255;partial=true;product=sugar ABC transporter ATP-binding protein;protein_id=TGD60170.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000326.1 1 355 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000326.1 Genbank region 1 355 . + . ID=PYKI01000326.1:1..355;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000326.1 Genbank pseudogene 1 321 . + . ID=gene-C9F07_02290;Name=C9F07_02290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02290;pseudo=true PYKI01000326.1 Protein Homology CDS 1 321 . + 1 ID=cds-C9F07_02290;Parent=gene-C9F07_02290;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454896.1;locus_tag=C9F07_02290;product=type VI secretion system tip protein VgrG;pseudo=true;transl_table=11 ##sequence-region PYKI01000991.1 1 354 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000991.1 Genbank region 1 354 . + . ID=PYKI01000991.1:1..354;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000991.1 Genbank gene 1 197 . + . ID=gene-C9F07_09055;Name=C9F07_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09055;partial=true;start_range=.,1 PYKI01000991.1 Protein Homology CDS 1 197 . + 2 ID=cds-TGD99169.1;Parent=gene-C9F07_09055;Dbxref=NCBI_GP:TGD99169.1;Name=TGD99169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457704.1;locus_tag=C9F07_09055;partial=true;product=hypothetical protein;protein_id=TGD99169.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000792.1 1 354 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000792.1 Genbank region 1 354 . + . ID=PYKI01000792.1:1..354;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000792.1 Genbank gene 1 354 . - . ID=gene-C9F07_07120;Name=C9F07_07120;end_range=354,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07120;partial=true;start_range=.,1 PYKI01000792.1 Protein Homology CDS 1 354 . - 2 ID=cds-TGE09154.1;Parent=gene-C9F07_07120;Dbxref=NCBI_GP:TGE09154.1;Name=TGE09154.1;end_range=354,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458032.1;locus_tag=C9F07_07120;partial=true;product=hypothetical protein;protein_id=TGE09154.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001115.1 1 353 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001115.1 Genbank region 1 353 . + . ID=PYKI01001115.1:1..353;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001115.1 Genbank gene 1 175 . + . ID=gene-C9F07_10390;Name=C9F07_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10390;partial=true;start_range=.,1 PYKI01001115.1 Protein Homology CDS 1 175 . + 1 ID=cds-TGD94952.1;Parent=gene-C9F07_10390;Dbxref=NCBI_GP:TGD94952.1;Name=TGD94952.1;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455844.3;locus_tag=C9F07_10390;partial=true;product=transcriptional regulator FNR;protein_id=TGD94952.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001739.1 1 2924 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001739.1 Genbank region 1 2924 . + . ID=PYKI01001739.1:1..2924;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001739.1 Genbank gene 1 1071 . - . ID=gene-C9F07_16630;Name=C9F07_16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16630;partial=true;start_range=.,1 PYKI01001739.1 Protein Homology CDS 1 1071 . - 0 ID=cds-TGD68482.1;Parent=gene-C9F07_16630;Dbxref=NCBI_GP:TGD68482.1;Name=TGD68482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457945.1;locus_tag=C9F07_16630;partial=true;product=hypothetical protein;protein_id=TGD68482.1;start_range=.,1;transl_table=11 PYKI01001739.1 Genbank gene 1236 2126 . - . ID=gene-C9F07_16635;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=C9F07_16635 PYKI01001739.1 Protein Homology CDS 1236 2126 . - 0 ID=cds-TGD68483.1;Parent=gene-C9F07_16635;Dbxref=NCBI_GP:TGD68483.1;Name=TGD68483.1;Note=MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor;gbkey=CDS;gene=metF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457946.1;locus_tag=C9F07_16635;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=TGD68483.1;transl_table=11 PYKI01001739.1 Genbank gene 2321 2924 . - . ID=gene-C9F07_16640;Name=C9F07_16640;end_range=2924,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16640;partial=true PYKI01001739.1 Protein Homology CDS 2321 2924 . - 1 ID=cds-TGD68484.1;Parent=gene-C9F07_16640;Dbxref=NCBI_GP:TGD68484.1;Name=TGD68484.1;end_range=2924,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=C9F07_16640;partial=true;product=multifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase;protein_id=TGD68484.1;transl_table=11 ##sequence-region PYKI01002301.1 1 353 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002301.1 Genbank region 1 353 . + . ID=PYKI01002301.1:1..353;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002301.1 Genbank gene 1 353 . - . ID=gene-C9F07_22575;Name=C9F07_22575;end_range=353,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22575;partial=true;start_range=.,1 PYKI01002301.1 Protein Homology CDS 1 353 . - 1 ID=cds-TGD54529.1;Parent=gene-C9F07_22575;Dbxref=NCBI_GP:TGD54529.1;Name=TGD54529.1;end_range=353,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=C9F07_22575;partial=true;product=hypothetical protein;protein_id=TGD54529.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000219.1 1 352 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000219.1 Genbank region 1 352 . + . ID=PYKI01000219.1:1..352;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000219.1 Genbank gene 160 352 . - . ID=gene-C9F07_01440;Name=C9F07_01440;end_range=352,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01440;partial=true PYKI01000219.1 Protein Homology CDS 160 352 . - 1 ID=cds-TGE30013.1;Parent=gene-C9F07_01440;Dbxref=NCBI_GP:TGE30013.1;Name=TGE30013.1;Note=catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs;end_range=352,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=C9F07_01440;partial=true;product=bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA;protein_id=TGE30013.1;transl_table=11 ##sequence-region PYKI01002778.1 1 352 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002778.1 Genbank region 1 352 . + . ID=PYKI01002778.1:1..352;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002778.1 Genbank gene 23 310 . + . ID=gene-C9F07_27750;Name=C9F07_27750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27750 PYKI01002778.1 Protein Homology CDS 23 310 . + 0 ID=cds-TGD46324.1;Parent=gene-C9F07_27750;Dbxref=NCBI_GP:TGD46324.1;Name=TGD46324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=C9F07_27750;product=ferredoxin-like protein FixX;protein_id=TGD46324.1;transl_table=11 ##sequence-region PYKI01000098.1 1 352 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000098.1 Genbank region 1 352 . + . ID=PYKI01000098.1:1..352;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000098.1 Genbank gene 1 352 . + . ID=gene-C9F07_00630;Name=C9F07_00630;end_range=352,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00630;partial=true;start_range=.,1 PYKI01000098.1 Protein Homology CDS 1 352 . + 2 ID=cds-TGE30137.1;Parent=gene-C9F07_00630;Dbxref=NCBI_GP:TGE30137.1;Name=TGE30137.1;end_range=352,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=C9F07_00630;partial=true;product=fructose 1%2C6-bisphosphatase;protein_id=TGE30137.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000705.1 1 352 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000705.1 Genbank region 1 352 . + . ID=PYKI01000705.1:1..352;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000705.1 Genbank gene 1 352 . - . ID=gene-C9F07_06195;Name=C9F07_06195;end_range=352,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06195;partial=true;start_range=.,1 PYKI01000705.1 Protein Homology CDS 1 352 . - 2 ID=cds-TGE11309.1;Parent=gene-C9F07_06195;Dbxref=NCBI_GP:TGE11309.1;Name=TGE11309.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;end_range=352,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455246.1;locus_tag=C9F07_06195;partial=true;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=TGE11309.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000711.1 1 351 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000711.1 Genbank region 1 351 . + . ID=PYKI01000711.1:1..351;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000711.1 Genbank gene 1 351 . + . ID=gene-C9F07_06235;Name=C9F07_06235;end_range=351,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06235;partial=true;start_range=.,1 PYKI01000711.1 Protein Homology CDS 1 351 . + 2 ID=cds-TGE11301.1;Parent=gene-C9F07_06235;Dbxref=NCBI_GP:TGE11301.1;Name=TGE11301.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;end_range=351,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462202.3;locus_tag=C9F07_06235;partial=true;product=argininosuccinate synthase;protein_id=TGE11301.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000069.1 1 351 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000069.1 Genbank region 1 351 . + . ID=PYKI01000069.1:1..351;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000069.1 Genbank gene 1 351 . + . ID=gene-C9F07_00425;Name=C9F07_00425;end_range=351,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00425;partial=true;start_range=.,1 PYKI01000069.1 Protein Homology CDS 1 351 . + 2 ID=cds-TGE30170.1;Parent=gene-C9F07_00425;Dbxref=NCBI_GP:TGE30170.1;Name=TGE30170.1;end_range=351,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462037.1;locus_tag=C9F07_00425;partial=true;product=arylsulfatase;protein_id=TGE30170.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000272.1 1 351 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000272.1 Genbank region 1 351 . + . ID=PYKI01000272.1:1..351;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000272.1 Genbank pseudogene 1 351 . - . ID=gene-C9F07_01760;Name=C9F07_01760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01760;pseudo=true PYKI01000272.1 Protein Homology CDS 1 351 . - 2 ID=cds-C9F07_01760;Parent=gene-C9F07_01760;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455932.1;locus_tag=C9F07_01760;product=malto-oligosyltrehalose trehalohydrolase;pseudo=true;transl_table=11 ##sequence-region PYKI01003588.1 1 351 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003588.1 Genbank region 1 351 . + . ID=PYKI01003588.1:1..351;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003588.1 Genbank gene 1 168 . + . ID=gene-C9F07_36200;Name=C9F07_36200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36200;partial=true;start_range=.,1 PYKI01003588.1 Protein Homology CDS 1 168 . + 0 ID=cds-TGD29904.1;Parent=gene-C9F07_36200;Dbxref=NCBI_GP:TGD29904.1;Name=TGD29904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455404.1;locus_tag=C9F07_36200;partial=true;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=TGD29904.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002058.1 1 351 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002058.1 Genbank region 1 351 . + . ID=PYKI01002058.1:1..351;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002058.1 Genbank pseudogene 1 351 . + . ID=gene-C9F07_19925;Name=C9F07_19925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19925;pseudo=true PYKI01002058.1 Protein Homology CDS 1 351 . + 0 ID=cds-C9F07_19925;Parent=gene-C9F07_19925;Note=C4-dicarboxylate-sensing histidine kinase%3B part of two-component regulatory system with DcuR%3B regulates anaerobic fumarate respiration%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458603.1;locus_tag=C9F07_19925;product=two-component system sensor histidine kinase DcuS;pseudo=true;transl_table=11 ##sequence-region PYKI01001424.1 1 2920 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001424.1 Genbank region 1 2920 . + . ID=PYKI01001424.1:1..2920;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001424.1 Genbank gene 1 584 . - . ID=gene-C9F07_13495;Name=C9F07_13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13495;partial=true;start_range=.,1 PYKI01001424.1 Protein Homology CDS 1 584 . - 0 ID=cds-TGD83727.1;Parent=gene-C9F07_13495;Dbxref=NCBI_GP:TGD83727.1;Name=TGD83727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458955.1;locus_tag=C9F07_13495;partial=true;product=carbon starvation protein A;protein_id=TGD83727.1;start_range=.,1;transl_table=11 PYKI01001424.1 Genbank gene 951 2612 . + . ID=gene-C9F07_13500;Name=C9F07_13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13500 PYKI01001424.1 Protein Homology CDS 951 2612 . + 0 ID=cds-TGD83728.1;Parent=gene-C9F07_13500;Dbxref=NCBI_GP:TGD83728.1;Name=TGD83728.1;Note=serine sensor receptor;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=C9F07_13500;product=methyl-accepting chemotaxis protein;protein_id=TGD83728.1;transl_table=11 PYKI01001424.1 Genbank gene 2724 2920 . - . ID=gene-C9F07_13505;Name=C9F07_13505;end_range=2920,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13505;partial=true PYKI01001424.1 Protein Homology CDS 2724 2920 . - 2 ID=cds-TGD83729.1;Parent=gene-C9F07_13505;Dbxref=NCBI_GP:TGD83729.1;Name=TGD83729.1;end_range=2920,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534459.1;locus_tag=C9F07_13505;partial=true;product=hypothetical protein;protein_id=TGD83729.1;transl_table=11 ##sequence-region PYKI01000105.1 1 350 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000105.1 Genbank region 1 350 . + . ID=PYKI01000105.1:1..350;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000105.1 Genbank gene 136 350 . + . ID=gene-C9F07_00660;Name=recD;end_range=350,.;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=C9F07_00660;partial=true PYKI01000105.1 Protein Homology CDS 136 350 . + 0 ID=cds-TGE30134.1;Parent=gene-C9F07_00660;Dbxref=NCBI_GP:TGE30134.1;Name=TGE30134.1;Note=helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;end_range=350,.;gbkey=CDS;gene=recD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=C9F07_00660;partial=true;product=exodeoxyribonuclease V subunit alpha;protein_id=TGE30134.1;transl_table=11 ##sequence-region PYKI01002172.1 1 350 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002172.1 Genbank region 1 350 . + . ID=PYKI01002172.1:1..350;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002172.1 Genbank gene 1 350 . + . ID=gene-C9F07_21105;Name=C9F07_21105;end_range=350,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21105;partial=true;start_range=.,1 PYKI01002172.1 Protein Homology CDS 1 350 . + 2 ID=cds-TGD56989.1;Parent=gene-C9F07_21105;Dbxref=NCBI_GP:TGD56989.1;Name=TGD56989.1;Note=with GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol%3B subunit IIC forms the translocation channel and contains the substrate binding site;end_range=350,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458155.1;locus_tag=C9F07_21105;partial=true;product=PTS galactitol transporter subunit IIC;protein_id=TGD56989.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003091.1 1 350 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003091.1 Genbank region 1 350 . + . ID=PYKI01003091.1:1..350;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003091.1 Genbank gene 1 350 . - . ID=gene-C9F07_30935;Name=C9F07_30935;end_range=350,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30935;partial=true;start_range=.,1 PYKI01003091.1 Protein Homology CDS 1 350 . - 2 ID=cds-TGD40076.1;Parent=gene-C9F07_30935;Dbxref=NCBI_GP:TGD40076.1;Name=TGD40076.1;Note=with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine;end_range=350,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456895.1;locus_tag=C9F07_30935;partial=true;product=amino acid ABC transporter permease;protein_id=TGD40076.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002056.1 1 349 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002056.1 Genbank region 1 349 . + . ID=PYKI01002056.1:1..349;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002056.1 Genbank gene 1 349 . - . ID=gene-C9F07_19915;Name=C9F07_19915;end_range=349,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19915;partial=true;start_range=.,1 PYKI01002056.1 Protein Homology CDS 1 349 . - 1 ID=cds-TGD59945.1;Parent=gene-C9F07_19915;Dbxref=NCBI_GP:TGD59945.1;Name=TGD59945.1;Note=c-di-GMP phosphodiesterase%3B probably degrades signalling molecule c-di-GMP;end_range=349,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=C9F07_19915;partial=true;product=cyclic di-GMP phosphodiesterase;protein_id=TGD59945.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000623.1 1 348 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000623.1 Genbank region 1 348 . + . ID=PYKI01000623.1:1..348;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000623.1 Genbank gene 230 337 . + . ID=gene-C9F07_05370;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=C9F07_05370 PYKI01000623.1 cmsearch antisense_RNA 230 337 . + . ID=rna-C9F07_05370;Parent=gene-C9F07_05370;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00034,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_05370;product=antisense sRNA RprA PYKI01000623.1 cmsearch exon 230 337 . + . ID=exon-C9F07_05370-1;Parent=rna-C9F07_05370;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00034,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_05370;product=antisense sRNA RprA ##sequence-region PYKI01000425.1 1 347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000425.1 Genbank region 1 347 . + . ID=PYKI01000425.1:1..347;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000425.1 Genbank gene 1 347 . - . ID=gene-C9F07_03285;Name=C9F07_03285;end_range=347,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03285;partial=true;start_range=.,1 PYKI01000425.1 Protein Homology CDS 1 347 . - 1 ID=cds-TGE20840.1;Parent=gene-C9F07_03285;Dbxref=NCBI_GP:TGE20840.1;Name=TGE20840.1;Note=catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis;end_range=347,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458243.1;locus_tag=C9F07_03285;partial=true;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=TGE20840.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000267.1 1 347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000267.1 Genbank region 1 347 . + . ID=PYKI01000267.1:1..347;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000267.1 Genbank gene 187 347 . + . ID=gene-C9F07_01735;Name=C9F07_01735;end_range=347,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01735;partial=true PYKI01000267.1 Protein Homology CDS 187 347 . + 0 ID=cds-TGE27842.1;Parent=gene-C9F07_01735;Dbxref=NCBI_GP:TGE27842.1;Name=TGE27842.1;end_range=347,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455660.1;locus_tag=C9F07_01735;partial=true;product=30S ribosomal protein S5 alanine N-acetyltransferase;protein_id=TGE27842.1;transl_table=11 ##sequence-region PYKI01000204.1 1 347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000204.1 Genbank region 1 347 . + . ID=PYKI01000204.1:1..347;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000204.1 Genbank gene 49 327 . - . ID=gene-C9F07_01365;Name=C9F07_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01365 PYKI01000204.1 Protein Homology CDS 49 327 . - 0 ID=cds-TGE30022.1;Parent=gene-C9F07_01365;Dbxref=NCBI_GP:TGE30022.1;Name=TGE30022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280384.1;locus_tag=C9F07_01365;product=aldehyde-activating protein;protein_id=TGE30022.1;transl_table=11 ##sequence-region PYKI01001163.1 1 347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001163.1 Genbank region 1 347 . + . ID=PYKI01001163.1:1..347;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001163.1 Genbank pseudogene 1 347 . + . ID=gene-C9F07_10870;Name=C9F07_10870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10870;pseudo=true PYKI01001163.1 Protein Homology CDS 1 347 . + 2 ID=cds-C9F07_10870;Parent=gene-C9F07_10870;Note=Required for the expression of anaerobic nitric oxide (NO) reductase%3B acts as a transcriptional activator for the norVW operon%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457233.1;locus_tag=C9F07_10870;product=nitric oxide reductase transcription regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01001942.1 1 347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001942.1 Genbank region 1 347 . + . ID=PYKI01001942.1:1..347;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001942.1 Genbank gene 1 347 . - . ID=gene-C9F07_18725;Name=C9F07_18725;end_range=347,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18725;partial=true;start_range=.,1 PYKI01001942.1 Protein Homology CDS 1 347 . - 2 ID=cds-TGD60652.1;Parent=gene-C9F07_18725;Dbxref=NCBI_GP:TGD60652.1;Name=TGD60652.1;end_range=347,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458927.1;locus_tag=C9F07_18725;partial=true;product=hypothetical protein;protein_id=TGD60652.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003073.1 1 2913 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003073.1 Genbank region 1 2913 . + . ID=PYKI01003073.1:1..2913;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003073.1 Genbank pseudogene 1 1726 . + . ID=gene-C9F07_30810;Name=C9F07_30810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30810;pseudo=true PYKI01003073.1 Protein Homology CDS 1 1726 . + 1 ID=cds-C9F07_30810;Parent=gene-C9F07_30810;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457534.1;locus_tag=C9F07_30810;product=bifunctional glutathionylspermidine amidase/synthase;pseudo=true;transl_table=11 PYKI01003073.1 Genbank gene 2385 2913 . + . ID=gene-C9F07_30815;Name=C9F07_30815;end_range=2913,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30815;partial=true PYKI01003073.1 Protein Homology CDS 2385 2913 . + 0 ID=cds-TGD40444.1;Parent=gene-C9F07_30815;Dbxref=NCBI_GP:TGD40444.1;Name=TGD40444.1;end_range=2913,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457533.1;locus_tag=C9F07_30815;partial=true;product=chemotaxis protein;protein_id=TGD40444.1;transl_table=11 ##sequence-region PYKI01001162.1 1 346 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001162.1 Genbank region 1 346 . + . ID=PYKI01001162.1:1..346;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001162.1 Genbank pseudogene 17 286 . + . ID=gene-C9F07_10865;Name=C9F07_10865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10865;pseudo=true PYKI01001162.1 Protein Homology CDS 17 286 . + 0 ID=cds-C9F07_10865;Parent=gene-C9F07_10865;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539916.1;locus_tag=C9F07_10865;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001017.1 1 346 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001017.1 Genbank region 1 346 . + . ID=PYKI01001017.1:1..346;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001017.1 Genbank pseudogene 1 261 . - . ID=gene-C9F07_09345;Name=C9F07_09345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09345;pseudo=true PYKI01001017.1 Protein Homology CDS 1 261 . - 0 ID=cds-C9F07_09345;Parent=gene-C9F07_09345;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=C9F07_09345;product=colanic acid biosynthesis glycosyltransferase WcaL;pseudo=true;transl_table=11 ##sequence-region PYKI01001140.1 1 346 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001140.1 Genbank region 1 346 . + . ID=PYKI01001140.1:1..346;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001140.1 Genbank gene 1 346 . + . ID=gene-C9F07_10615;Name=C9F07_10615;end_range=346,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10615;partial=true;start_range=.,1 PYKI01001140.1 Protein Homology CDS 1 346 . + 2 ID=cds-TGD94309.1;Parent=gene-C9F07_10615;Dbxref=NCBI_GP:TGD94309.1;Name=TGD94309.1;end_range=346,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455783.1;locus_tag=C9F07_10615;partial=true;product=hypothetical protein;protein_id=TGD94309.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000079.1 1 346 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000079.1 Genbank region 1 346 . + . ID=PYKI01000079.1:1..346;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000079.1 Genbank pseudogene 1 346 . - . ID=gene-C9F07_00495;Name=C9F07_00495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00495;pseudo=true PYKI01000079.1 Protein Homology CDS 1 346 . - 0 ID=cds-C9F07_00495;Parent=gene-C9F07_00495;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=C9F07_00495;product=penicillin-binding protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001666.1 1 345 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001666.1 Genbank region 1 345 . + . ID=PYKI01001666.1:1..345;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001666.1 Genbank gene 1 345 . - . ID=gene-C9F07_15915;Name=C9F07_15915;end_range=345,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15915;partial=true;start_range=.,1 PYKI01001666.1 Protein Homology CDS 1 345 . - 1 ID=cds-TGD70124.1;Parent=gene-C9F07_15915;Dbxref=NCBI_GP:TGD70124.1;Name=TGD70124.1;end_range=345,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458384.1;locus_tag=C9F07_15915;partial=true;product=glycogen phosphorylase;protein_id=TGD70124.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002406.1 1 345 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002406.1 Genbank region 1 345 . + . ID=PYKI01002406.1:1..345;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002406.1 Genbank gene 158 345 . + . ID=gene-C9F07_23775;Name=C9F07_23775;end_range=345,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23775;partial=true PYKI01002406.1 Protein Homology CDS 158 345 . + 0 ID=cds-TGD51796.1;Parent=gene-C9F07_23775;Dbxref=NCBI_GP:TGD51796.1;Name=TGD51796.1;end_range=345,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310874.1;locus_tag=C9F07_23775;partial=true;product=UDP-N-acetylglucosamine 4-epimerase;protein_id=TGD51796.1;transl_table=11 ##sequence-region PYKI01000694.1 1 345 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000694.1 Genbank region 1 345 . + . ID=PYKI01000694.1:1..345;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000694.1 Genbank gene 1 240 . - . ID=gene-C9F07_06090;Name=C9F07_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06090;partial=true;start_range=.,1 PYKI01000694.1 Protein Homology CDS 1 240 . - 0 ID=cds-TGE11325.1;Parent=gene-C9F07_06090;Dbxref=NCBI_GP:TGE11325.1;Name=TGE11325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001719620.1;locus_tag=C9F07_06090;partial=true;product=two-component system sensor histidine kinase BaeA;protein_id=TGE11325.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000462.1 1 345 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000462.1 Genbank region 1 345 . + . ID=PYKI01000462.1:1..345;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000462.1 Genbank gene 1 345 . - . ID=gene-C9F07_03635;Name=C9F07_03635;end_range=345,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03635;partial=true;start_range=.,1 PYKI01000462.1 Protein Homology CDS 1 345 . - 1 ID=cds-TGE19768.1;Parent=gene-C9F07_03635;Dbxref=NCBI_GP:TGE19768.1;Name=TGE19768.1;end_range=345,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455446.1;locus_tag=C9F07_03635;partial=true;product=thioredoxin reductase;protein_id=TGE19768.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000217.1 1 345 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000217.1 Genbank region 1 345 . + . ID=PYKI01000217.1:1..345;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000217.1 Genbank gene 1 345 . - . ID=gene-C9F07_01430;Name=C9F07_01430;end_range=345,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01430;partial=true;start_range=.,1 PYKI01000217.1 Protein Homology CDS 1 345 . - 2 ID=cds-TGE30014.1;Parent=gene-C9F07_01430;Dbxref=NCBI_GP:TGE30014.1;Name=TGE30014.1;end_range=345,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=C9F07_01430;partial=true;product=DUF1338 domain-containing protein;protein_id=TGE30014.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003138.1 1 344 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003138.1 Genbank region 1 344 . + . ID=PYKI01003138.1:1..344;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003138.1 Genbank gene 31 344 . + . ID=gene-C9F07_31420;Name=era;end_range=344,.;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=C9F07_31420;partial=true PYKI01003138.1 Protein Homology CDS 31 344 . + 0 ID=cds-TGD38735.1;Parent=gene-C9F07_31420;Dbxref=NCBI_GP:TGD38735.1;Name=TGD38735.1;end_range=344,.;gbkey=CDS;gene=era;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457109.1;locus_tag=C9F07_31420;partial=true;product=GTPase Era;protein_id=TGD38735.1;transl_table=11 ##sequence-region PYKI01000368.1 1 344 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000368.1 Genbank region 1 344 . + . ID=PYKI01000368.1:1..344;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000368.1 Genbank gene 1 344 . - . ID=gene-C9F07_02785;Name=C9F07_02785;end_range=344,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02785;partial=true;start_range=.,1 PYKI01000368.1 Protein Homology CDS 1 344 . - 2 ID=cds-TGE23187.1;Parent=gene-C9F07_02785;Dbxref=NCBI_GP:TGE23187.1;Name=TGE23187.1;end_range=344,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458296.1;locus_tag=C9F07_02785;partial=true;product=hypothetical protein;protein_id=TGE23187.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000121.1 1 344 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000121.1 Genbank region 1 344 . + . ID=PYKI01000121.1:1..344;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000121.1 Genbank pseudogene 56 344 . + . ID=gene-C9F07_00820;Name=C9F07_00820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00820;pseudo=true PYKI01000121.1 Protein Homology CDS 56 344 . + 0 ID=cds-C9F07_00820;Parent=gene-C9F07_00820;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458829.1;locus_tag=C9F07_00820;product=EamA family transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01003526.1 1 344 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003526.1 Genbank region 1 344 . + . ID=PYKI01003526.1:1..344;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003526.1 Genbank pseudogene 176 274 . + . ID=gene-C9F07_35600;Name=C9F07_35600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35600;pseudo=true PYKI01003526.1 Protein Homology CDS 176 274 . + 0 ID=cds-C9F07_35600;Parent=gene-C9F07_35600;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454888.1;locus_tag=C9F07_35600;product=cytoplasmic protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000243.1 1 343 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000243.1 Genbank region 1 343 . + . ID=PYKI01000243.1:1..343;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000243.1 Genbank gene 206 343 . + . ID=gene-C9F07_01595;Name=C9F07_01595;end_range=343,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01595;partial=true PYKI01000243.1 Protein Homology CDS 206 343 . + 0 ID=cds-TGE27864.1;Parent=gene-C9F07_01595;Dbxref=NCBI_GP:TGE27864.1;Name=TGE27864.1;Note=catalyzes the formation of D-ribose 5-phosphate from ribose;end_range=343,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458058.1;locus_tag=C9F07_01595;partial=true;product=ribokinase;protein_id=TGE27864.1;transl_table=11 ##sequence-region PYKI01001541.1 1 342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001541.1 Genbank region 1 342 . + . ID=PYKI01001541.1:1..342;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001541.1 Genbank gene 1 342 . - . ID=gene-C9F07_14740;Name=hypB;end_range=342,.;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=C9F07_14740;partial=true;start_range=.,1 PYKI01001541.1 Protein Homology CDS 1 342 . - 1 ID=cds-TGD75498.1;Parent=gene-C9F07_14740;Dbxref=NCBI_GP:TGD75498.1;Name=TGD75498.1;end_range=342,.;gbkey=CDS;gene=hypB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457249.1;locus_tag=C9F07_14740;partial=true;product=hydrogenase accessory protein HypB;protein_id=TGD75498.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002970.1 1 342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002970.1 Genbank region 1 342 . + . ID=PYKI01002970.1:1..342;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002970.1 Genbank gene 1 342 . - . ID=gene-C9F07_29770;Name=C9F07_29770;end_range=342,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29770;partial=true;start_range=.,1 PYKI01002970.1 Protein Homology CDS 1 342 . - 0 ID=cds-TGD41673.1;Parent=gene-C9F07_29770;Dbxref=NCBI_GP:TGD41673.1;Name=TGD41673.1;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme;end_range=342,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457592.1;locus_tag=C9F07_29770;partial=true;product=bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase;protein_id=TGD41673.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002679.1 1 341 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002679.1 Genbank region 1 341 . + . ID=PYKI01002679.1:1..341;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002679.1 Genbank gene 1 341 . - . ID=gene-C9F07_26695;Name=C9F07_26695;end_range=341,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26695;partial=true;start_range=.,1 PYKI01002679.1 Protein Homology CDS 1 341 . - 1 ID=cds-TGD48674.1;Parent=gene-C9F07_26695;Dbxref=NCBI_GP:TGD48674.1;Name=TGD48674.1;end_range=341,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457189.1;locus_tag=C9F07_26695;partial=true;product=hypothetical protein;protein_id=TGD48674.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000296.1 1 341 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000296.1 Genbank region 1 341 . + . ID=PYKI01000296.1:1..341;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000296.1 Genbank gene 1 341 . + . ID=gene-C9F07_01955;Name=recD;end_range=341,.;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=C9F07_01955;partial=true;start_range=.,1 PYKI01000296.1 Protein Homology CDS 1 341 . + 2 ID=cds-TGE27806.1;Parent=gene-C9F07_01955;Dbxref=NCBI_GP:TGE27806.1;Name=TGE27806.1;Note=helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;end_range=341,.;gbkey=CDS;gene=recD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457386.1;locus_tag=C9F07_01955;partial=true;product=exodeoxyribonuclease V subunit alpha;protein_id=TGE27806.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003099.1 1 2908 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003099.1 Genbank region 1 2908 . + . ID=PYKI01003099.1:1..2908;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003099.1 Genbank gene 1 327 . + . ID=gene-C9F07_31010;Name=C9F07_31010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31010;partial=true;start_range=.,1 PYKI01003099.1 Protein Homology CDS 1 327 . + 0 ID=cds-TGD39795.1;Parent=gene-C9F07_31010;Dbxref=NCBI_GP:TGD39795.1;Name=TGD39795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818745.1;locus_tag=C9F07_31010;partial=true;product=peroxiredoxin;protein_id=TGD39795.1;start_range=.,1;transl_table=11 PYKI01003099.1 Genbank pseudogene 350 442 . + . ID=gene-C9F07_31015;Name=C9F07_31015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31015;pseudo=true PYKI01003099.1 Protein Homology CDS 350 442 . + 0 ID=cds-C9F07_31015;Parent=gene-C9F07_31015;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000244729.1;locus_tag=C9F07_31015;product=peroxiredoxin;pseudo=true;transl_table=11 PYKI01003099.1 Genbank gene 399 2216 . - . ID=gene-C9F07_31020;Name=C9F07_31020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31020 PYKI01003099.1 Protein Homology CDS 399 2216 . - 0 ID=cds-TGD39796.1;Parent=gene-C9F07_31020;Dbxref=NCBI_GP:TGD39796.1;Name=TGD39796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=C9F07_31020;product=maltodextrin glucosidase;protein_id=TGD39796.1;transl_table=11 PYKI01003099.1 Genbank gene 2378 2908 . - . ID=gene-C9F07_31025;Name=proY;end_range=2908,.;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=C9F07_31025;partial=true PYKI01003099.1 Protein Homology CDS 2378 2908 . - 0 ID=cds-TGD39797.1;Parent=gene-C9F07_31025;Dbxref=NCBI_GP:TGD39797.1;Name=TGD39797.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;end_range=2908,.;gbkey=CDS;gene=proY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=C9F07_31025;partial=true;product=proline-specific permease ProY;protein_id=TGD39797.1;transl_table=11 ##sequence-region PYKI01003147.1 1 5989 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003147.1 Genbank region 1 5989 . + . ID=PYKI01003147.1:1..5989;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003147.1 Genbank gene 1 744 . + . ID=gene-C9F07_31550;Name=C9F07_31550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31550;partial=true;start_range=.,1 PYKI01003147.1 Protein Homology CDS 1 744 . + 0 ID=cds-TGD38515.1;Parent=gene-C9F07_31550;Dbxref=NCBI_GP:TGD38515.1;Name=TGD38515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=C9F07_31550;partial=true;product=serine--tRNA ligase;protein_id=TGD38515.1;start_range=.,1;transl_table=11 PYKI01003147.1 Genbank gene 982 3426 . + . ID=gene-C9F07_31555;Name=C9F07_31555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31555 PYKI01003147.1 Protein Homology CDS 982 3426 . + 0 ID=cds-TGD38516.1;Parent=gene-C9F07_31555;Dbxref=NCBI_GP:TGD38516.1;Name=TGD38516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=C9F07_31555;product=dimethylsulfoxide reductase subunit A;protein_id=TGD38516.1;transl_table=11 PYKI01003147.1 Genbank gene 3437 4054 . + . ID=gene-C9F07_31560;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=C9F07_31560 PYKI01003147.1 Protein Homology CDS 3437 4054 . + 0 ID=cds-TGD38517.1;Parent=gene-C9F07_31560;Dbxref=NCBI_GP:TGD38517.1;Name=TGD38517.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455453.1;locus_tag=C9F07_31560;product=dimethylsulfoxide reductase%2C chain B;protein_id=TGD38517.1;transl_table=11 PYKI01003147.1 Genbank gene 4056 4919 . + . ID=gene-C9F07_31565;Name=C9F07_31565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31565 PYKI01003147.1 Protein Homology CDS 4056 4919 . + 0 ID=cds-TGD38518.1;Parent=gene-C9F07_31565;Dbxref=NCBI_GP:TGD38518.1;Name=TGD38518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455454.1;locus_tag=C9F07_31565;product=dimethyl sulfoxide reductase anchor subunit;protein_id=TGD38518.1;transl_table=11 PYKI01003147.1 Genbank gene 5269 5989 . + . ID=gene-C9F07_31570;Name=C9F07_31570;end_range=5989,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31570;partial=true PYKI01003147.1 Protein Homology CDS 5269 5989 . + 0 ID=cds-TGD38519.1;Parent=gene-C9F07_31570;Dbxref=NCBI_GP:TGD38519.1;Name=TGD38519.1;end_range=5989,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=C9F07_31570;partial=true;product=MFS transporter;protein_id=TGD38519.1;transl_table=11 ##sequence-region PYKI01000221.1 1 340 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000221.1 Genbank region 1 340 . + . ID=PYKI01000221.1:1..340;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000221.1 Genbank pseudogene 20 340 . + . ID=gene-C9F07_01450;Name=C9F07_01450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01450;pseudo=true PYKI01000221.1 Protein Homology CDS 20 340 . + 0 ID=cds-C9F07_01450;Parent=gene-C9F07_01450;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458032.1;locus_tag=C9F07_01450;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003376.1 1 340 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003376.1 Genbank region 1 340 . + . ID=PYKI01003376.1:1..340;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003376.1 Genbank gene 1 340 . - . ID=gene-C9F07_34005;Name=C9F07_34005;end_range=340,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34005;partial=true;start_range=.,1 PYKI01003376.1 Protein Homology CDS 1 340 . - 0 ID=cds-TGD34433.1;Parent=gene-C9F07_34005;Dbxref=NCBI_GP:TGD34433.1;Name=TGD34433.1;end_range=340,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458052.1;locus_tag=C9F07_34005;partial=true;product=hypothetical protein;protein_id=TGD34433.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002151.1 1 340 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002151.1 Genbank region 1 340 . + . ID=PYKI01002151.1:1..340;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002151.1 Genbank pseudogene 1 340 . + . ID=gene-C9F07_20895;Name=C9F07_20895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20895;pseudo=true PYKI01002151.1 Protein Homology CDS 1 340 . + 0 ID=cds-C9F07_20895;Parent=gene-C9F07_20895;Note=sigma-54 dependent activator family protein%3B activates the prpBCDE operon%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454962.1;locus_tag=C9F07_20895;product=propionate catabolism operon regulatory protein PrpR;pseudo=true;transl_table=11 ##sequence-region PYKI01000238.1 1 340 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000238.1 Genbank region 1 340 . + . ID=PYKI01000238.1:1..340;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000238.1 Genbank gene 1 103 . + . ID=gene-C9F07_01555;Name=C9F07_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01555;partial=true;start_range=.,1 PYKI01000238.1 Protein Homology CDS 1 103 . + 1 ID=cds-TGE27868.1;Parent=gene-C9F07_01555;Dbxref=NCBI_GP:TGE27868.1;Name=TGE27868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=C9F07_01555;partial=true;product=translation initiation factor IF-3;protein_id=TGE27868.1;start_range=.,1;transl_table=11 PYKI01000238.1 Genbank gene 199 340 . + . ID=gene-C9F07_01560;Name=C9F07_01560;end_range=340,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01560;partial=true PYKI01000238.1 Protein Homology CDS 199 340 . + 0 ID=cds-TGE27869.1;Parent=gene-C9F07_01560;Dbxref=NCBI_GP:TGE27869.1;Name=TGE27869.1;end_range=340,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=C9F07_01560;partial=true;product=50S ribosomal protein L35;protein_id=TGE27869.1;transl_table=11 ##sequence-region PYKI01002162.1 1 339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002162.1 Genbank region 1 339 . + . ID=PYKI01002162.1:1..339;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002162.1 Genbank pseudogene 66 339 . - . ID=gene-C9F07_21000;Name=C9F07_21000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21000;pseudo=true PYKI01002162.1 Protein Homology CDS 66 339 . - 1 ID=cds-C9F07_21000;Parent=gene-C9F07_21000;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454657.1;locus_tag=C9F07_21000;product=isoleucine--tRNA ligase;pseudo=true;transl_table=11 ##sequence-region PYKI01000400.1 1 339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000400.1 Genbank region 1 339 . + . ID=PYKI01000400.1:1..339;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000400.1 Genbank pseudogene 1 285 . - . ID=gene-C9F07_03050;Name=C9F07_03050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03050;pseudo=true PYKI01000400.1 Protein Homology CDS 1 285 . - 0 ID=cds-C9F07_03050;Parent=gene-C9F07_03050;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=C9F07_03050;product=ssrAB-activated protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000978.1 1 339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000978.1 Genbank region 1 339 . + . ID=PYKI01000978.1:1..339;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000978.1 Genbank gene 1 339 . + . ID=gene-C9F07_08920;Name=C9F07_08920;end_range=339,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08920;partial=true;start_range=.,1 PYKI01000978.1 Protein Homology CDS 1 339 . + 2 ID=cds-TGD99629.1;Parent=gene-C9F07_08920;Dbxref=NCBI_GP:TGD99629.1;Name=TGD99629.1;end_range=339,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457192.1;locus_tag=C9F07_08920;partial=true;product=GABA permease;protein_id=TGD99629.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000844.1 1 339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000844.1 Genbank region 1 339 . + . ID=PYKI01000844.1:1..339;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000844.1 Genbank pseudogene 1 233 . + . ID=gene-C9F07_07695;Name=C9F07_07695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07695;pseudo=true PYKI01000844.1 Protein Homology CDS 1 233 . + 2 ID=cds-C9F07_07695;Parent=gene-C9F07_07695;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463399.3;locus_tag=C9F07_07695;product=glucosamine--fructose-6-phosphate aminotransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01001148.1 1 339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001148.1 Genbank region 1 339 . + . ID=PYKI01001148.1:1..339;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001148.1 Genbank gene 1 339 . + . ID=gene-C9F07_10715;Name=emrD;end_range=339,.;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=C9F07_10715;partial=true;start_range=.,1 PYKI01001148.1 Protein Homology CDS 1 339 . + 0 ID=cds-TGD93868.1;Parent=gene-C9F07_10715;Dbxref=NCBI_GP:TGD93868.1;Name=TGD93868.1;Note=multidrug efflux protein involved in adaptation to low energy shock;end_range=339,.;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=C9F07_10715;partial=true;product=multidrug transporter EmrD;protein_id=TGD93868.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001281.1 1 339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001281.1 Genbank region 1 339 . + . ID=PYKI01001281.1:1..339;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001281.1 Genbank gene 1 339 . + . ID=gene-C9F07_12015;Name=C9F07_12015;end_range=339,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12015;partial=true;start_range=.,1 PYKI01001281.1 Protein Homology CDS 1 339 . + 2 ID=cds-TGD87750.1;Parent=gene-C9F07_12015;Dbxref=NCBI_GP:TGD87750.1;Name=TGD87750.1;Note=with MacA is involved in the export of macrolide;end_range=339,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455432.1;locus_tag=C9F07_12015;partial=true;product=macrolide ABC transporter permease/ATP-binding protein MacB;protein_id=TGD87750.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001239.1 1 2907 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001239.1 Genbank region 1 2907 . + . ID=PYKI01001239.1:1..2907;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001239.1 Genbank pseudogene 54 1028 . + . ID=gene-C9F07_11560;Name=C9F07_11560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11560;pseudo=true PYKI01001239.1 Protein Homology CDS 54 1028 . + 0 ID=cds-C9F07_11560;Parent=gene-C9F07_11560;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455902.1;locus_tag=C9F07_11560;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001239.1 Genbank pseudogene 1025 2907 . + . ID=gene-C9F07_11565;Name=C9F07_11565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11565;pseudo=true PYKI01001239.1 Protein Homology CDS 1025 2907 . + 0 ID=cds-C9F07_11565;Parent=gene-C9F07_11565;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455901.1;locus_tag=C9F07_11565;product=virulence effector SrfC;pseudo=true;transl_table=11 ##sequence-region PYKI01000020.1 1 338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000020.1 Genbank region 1 338 . + . ID=PYKI01000020.1:1..338;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000020.1 Genbank gene 1 229 . - . ID=gene-C9F07_00120;Name=C9F07_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00120;partial=true;start_range=.,1 PYKI01000020.1 Protein Homology CDS 1 229 . - 0 ID=cds-TGE30209.1;Parent=gene-C9F07_00120;Dbxref=NCBI_GP:TGE30209.1;Name=TGE30209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457590.1;locus_tag=C9F07_00120;partial=true;product=hypothetical protein;protein_id=TGE30209.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001372.1 1 338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001372.1 Genbank region 1 338 . + . ID=PYKI01001372.1:1..338;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001372.1 Genbank gene 1 338 . - . ID=gene-C9F07_12905;Name=C9F07_12905;end_range=338,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12905;partial=true;start_range=.,1 PYKI01001372.1 Protein Homology CDS 1 338 . - 2 ID=cds-TGD84491.1;Parent=gene-C9F07_12905;Dbxref=NCBI_GP:TGD84491.1;Name=TGD84491.1;end_range=338,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458725.1;locus_tag=C9F07_12905;partial=true;product=integrase;protein_id=TGD84491.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000495.1 1 338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000495.1 Genbank region 1 338 . + . ID=PYKI01000495.1:1..338;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000495.1 Genbank gene 1 338 . - . ID=gene-C9F07_04010;Name=C9F07_04010;end_range=338,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04010;partial=true;start_range=.,1 PYKI01000495.1 Protein Homology CDS 1 338 . - 2 ID=cds-TGE17618.1;Parent=gene-C9F07_04010;Dbxref=NCBI_GP:TGE17618.1;Name=TGE17618.1;end_range=338,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457627.1;locus_tag=C9F07_04010;partial=true;product=hypothetical protein;protein_id=TGE17618.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001949.1 1 338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001949.1 Genbank region 1 338 . + . ID=PYKI01001949.1:1..338;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001949.1 Genbank gene 1 338 . - . ID=gene-C9F07_18780;Name=C9F07_18780;end_range=338,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18780;partial=true;start_range=.,1 PYKI01001949.1 Protein Homology CDS 1 338 . - 0 ID=cds-TGD60553.1;Parent=gene-C9F07_18780;Dbxref=NCBI_GP:TGD60553.1;Name=TGD60553.1;end_range=338,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=C9F07_18780;partial=true;product=3-hydroxyisobutyrate dehydrogenase;protein_id=TGD60553.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001440.1 1 338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001440.1 Genbank region 1 338 . + . ID=PYKI01001440.1:1..338;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001440.1 Genbank gene 1 338 . + . ID=gene-C9F07_13620;Name=C9F07_13620;end_range=338,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13620;partial=true;start_range=.,1 PYKI01001440.1 Protein Homology CDS 1 338 . + 0 ID=cds-TGD83694.1;Parent=gene-C9F07_13620;Dbxref=NCBI_GP:TGD83694.1;Name=TGD83694.1;end_range=338,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=C9F07_13620;partial=true;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=TGD83694.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002261.1 1 338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002261.1 Genbank region 1 338 . + . ID=PYKI01002261.1:1..338;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002261.1 Genbank gene 96 338 . - . ID=gene-C9F07_22125;Name=C9F07_22125;end_range=338,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22125;partial=true PYKI01002261.1 Protein Homology CDS 96 338 . - 0 ID=cds-TGD55375.1;Parent=gene-C9F07_22125;Dbxref=NCBI_GP:TGD55375.1;Name=TGD55375.1;end_range=338,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=C9F07_22125;partial=true;product=peptide ABC transporter permease;protein_id=TGD55375.1;transl_table=11 ##sequence-region PYKI01000247.1 1 338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000247.1 Genbank region 1 338 . + . ID=PYKI01000247.1:1..338;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000247.1 Genbank gene 1 201 . - . ID=gene-C9F07_01615;Name=C9F07_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01615;partial=true;start_range=.,1 PYKI01000247.1 Protein Homology CDS 1 201 . - 0 ID=cds-TGE27861.1;Parent=gene-C9F07_01615;Dbxref=NCBI_GP:TGE27861.1;Name=TGE27861.1;Note=ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458853.1;locus_tag=C9F07_01615;partial=true;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=TGE27861.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002511.1 1 338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002511.1 Genbank region 1 338 . + . ID=PYKI01002511.1:1..338;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002511.1 Genbank gene 1 338 . - . ID=gene-C9F07_24885;Name=C9F07_24885;end_range=338,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24885;partial=true;start_range=.,1 PYKI01002511.1 Protein Homology CDS 1 338 . - 0 ID=cds-TGD50184.1;Parent=gene-C9F07_24885;Dbxref=NCBI_GP:TGD50184.1;Name=TGD50184.1;end_range=338,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456681.1;locus_tag=C9F07_24885;partial=true;product=hypothetical protein;protein_id=TGD50184.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003427.1 1 337 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003427.1 Genbank region 1 337 . + . ID=PYKI01003427.1:1..337;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003427.1 Genbank gene 1 337 . + . ID=gene-C9F07_34445;Name=C9F07_34445;end_range=337,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34445;partial=true;start_range=.,1 PYKI01003427.1 Protein Homology CDS 1 337 . + 2 ID=cds-TGD33561.1;Parent=gene-C9F07_34445;Dbxref=NCBI_GP:TGD33561.1;Name=TGD33561.1;end_range=337,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455480.1;locus_tag=C9F07_34445;partial=true;product=chromosome partition protein MukB;protein_id=TGD33561.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000547.1 1 2902 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000547.1 Genbank region 1 2902 . + . ID=PYKI01000547.1:1..2902;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000547.1 Genbank gene 1 276 . - . ID=gene-C9F07_04550;Name=C9F07_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04550;partial=true;start_range=.,1 PYKI01000547.1 Protein Homology CDS 1 276 . - 0 ID=cds-TGE15351.1;Parent=gene-C9F07_04550;Dbxref=NCBI_GP:TGE15351.1;Name=TGE15351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417800.1;locus_tag=C9F07_04550;partial=true;product=30S ribosomal protein S7;protein_id=TGE15351.1;start_range=.,1;transl_table=11 PYKI01000547.1 Genbank gene 372 746 . - . ID=gene-C9F07_04555;Name=C9F07_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04555 PYKI01000547.1 Protein Homology CDS 372 746 . - 0 ID=cds-TGE15352.1;Parent=gene-C9F07_04555;Dbxref=NCBI_GP:TGE15352.1;Name=TGE15352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312220.1;locus_tag=C9F07_04555;product=30S ribosomal protein S12;protein_id=TGE15352.1;transl_table=11 PYKI01000547.1 Genbank gene 872 1159 . - . ID=gene-C9F07_04560;Name=C9F07_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04560 PYKI01000547.1 Protein Homology CDS 872 1159 . - 0 ID=cds-TGE15353.1;Parent=gene-C9F07_04560;Dbxref=NCBI_GP:TGE15353.1;Name=TGE15353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=C9F07_04560;product=sulfurtransferase TusB;protein_id=TGE15353.1;transl_table=11 PYKI01000547.1 Genbank gene 1167 1523 . - . ID=gene-C9F07_04565;Name=C9F07_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04565 PYKI01000547.1 Protein Homology CDS 1167 1523 . - 0 ID=cds-TGE15354.1;Parent=gene-C9F07_04565;Dbxref=NCBI_GP:TGE15354.1;Name=TGE15354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458450.1;locus_tag=C9F07_04565;product=sulfurtransferase complex subunit TusC;protein_id=TGE15354.1;transl_table=11 PYKI01000547.1 Genbank gene 1523 1909 . - . ID=gene-C9F07_04570;Name=C9F07_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04570 PYKI01000547.1 Protein Homology CDS 1523 1909 . - 0 ID=cds-TGE15355.1;Parent=gene-C9F07_04570;Dbxref=NCBI_GP:TGE15355.1;Name=TGE15355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=C9F07_04570;product=sulfurtransferase TusD;protein_id=TGE15355.1;transl_table=11 PYKI01000547.1 Genbank gene 1909 2631 . - . ID=gene-C9F07_04575;Name=C9F07_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04575 PYKI01000547.1 Protein Homology CDS 1909 2631 . - 0 ID=cds-TGE15356.1;Parent=gene-C9F07_04575;Dbxref=NCBI_GP:TGE15356.1;Name=TGE15356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458448.1;locus_tag=C9F07_04575;product=hypothetical protein;protein_id=TGE15356.1;transl_table=11 ##sequence-region PYKI01001702.1 1 337 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001702.1 Genbank region 1 337 . + . ID=PYKI01001702.1:1..337;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001702.1 Genbank gene 1 337 . + . ID=gene-C9F07_16235;Name=glnG;end_range=337,.;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=C9F07_16235;partial=true;start_range=.,1 PYKI01001702.1 Protein Homology CDS 1 337 . + 2 ID=cds-TGD69388.1;Parent=gene-C9F07_16235;Dbxref=NCBI_GP:TGD69388.1;Name=TGD69388.1;Note=response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54;end_range=337,.;gbkey=CDS;gene=glnG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458044.1;locus_tag=C9F07_16235;partial=true;product=nitrogen regulation protein NR(I);protein_id=TGD69388.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001217.1 1 337 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001217.1 Genbank region 1 337 . + . ID=PYKI01001217.1:1..337;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001217.1 Genbank pseudogene 79 337 . - . ID=gene-C9F07_11390;Name=C9F07_11390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11390;pseudo=true PYKI01001217.1 Protein Homology CDS 79 337 . - 1 ID=cds-C9F07_11390;Parent=gene-C9F07_11390;Note=catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455332.1;locus_tag=C9F07_11390;product=urocanate hydratase;pseudo=true;transl_table=11 ##sequence-region PYKI01001519.1 1 336 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001519.1 Genbank region 1 336 . + . ID=PYKI01001519.1:1..336;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001519.1 Genbank gene 1 336 . - . ID=gene-C9F07_14470;Name=C9F07_14470;end_range=336,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14470;partial=true;start_range=.,1 PYKI01001519.1 Protein Homology CDS 1 336 . - 0 ID=cds-TGD76608.1;Parent=gene-C9F07_14470;Dbxref=NCBI_GP:TGD76608.1;Name=TGD76608.1;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent;end_range=336,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456727.1;locus_tag=C9F07_14470;partial=true;product=D-lactate dehydrogenase;protein_id=TGD76608.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002001.1 1 336 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002001.1 Genbank region 1 336 . + . ID=PYKI01002001.1:1..336;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002001.1 Genbank gene 29 336 . + . ID=gene-C9F07_19295;Name=C9F07_19295;end_range=336,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19295;partial=true PYKI01002001.1 Protein Homology CDS 29 336 . + 0 ID=cds-TGD60149.1;Parent=gene-C9F07_19295;Dbxref=NCBI_GP:TGD60149.1;Name=TGD60149.1;end_range=336,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455349.1;locus_tag=C9F07_19295;partial=true;product=lysylphosphatidylglycerol synthetase family protein;protein_id=TGD60149.1;transl_table=11 ##sequence-region PYKI01000095.1 1 336 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000095.1 Genbank region 1 336 . + . ID=PYKI01000095.1:1..336;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000095.1 Genbank gene 1 284 . - . ID=gene-C9F07_00615;Name=C9F07_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00615;partial=true;start_range=.,1 PYKI01000095.1 Protein Homology CDS 1 284 . - 0 ID=cds-TGE30140.1;Parent=gene-C9F07_00615;Dbxref=NCBI_GP:TGE30140.1;Name=TGE30140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458543.1;locus_tag=C9F07_00615;partial=true;product=quinone oxidoreductase;protein_id=TGE30140.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003320.1 1 335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003320.1 Genbank region 1 335 . + . ID=PYKI01003320.1:1..335;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003320.1 Genbank gene 1 87 . - . ID=gene-C9F07_33395;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F07_33395;partial=true;start_range=.,1 PYKI01003320.1 cmsearch rRNA 1 87 . - . ID=rna-C9F07_33395;Parent=gene-C9F07_33395;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00001,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_33395;partial=true;product=5S ribosomal RNA;start_range=.,1 PYKI01003320.1 cmsearch exon 1 87 . - . ID=exon-C9F07_33395-1;Parent=rna-C9F07_33395;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00001,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_33395;partial=true;product=5S ribosomal RNA;start_range=.,1 PYKI01003320.1 Genbank gene 273 335 . - . ID=gene-C9F07_33400;Name=C9F07_33400;end_range=335,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F07_33400;partial=true PYKI01003320.1 Genbank rRNA 273 335 . - . ID=rna-C9F07_33400;Parent=gene-C9F07_33400;end_range=335,.;gbkey=rRNA;locus_tag=C9F07_33400;partial=true;product=23S ribosomal RNA PYKI01003320.1 Genbank exon 273 335 . - . ID=exon-C9F07_33400-1;Parent=rna-C9F07_33400;end_range=335,.;gbkey=rRNA;locus_tag=C9F07_33400;partial=true;product=23S ribosomal RNA ##sequence-region PYKI01000066.1 1 335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000066.1 Genbank region 1 335 . + . ID=PYKI01000066.1:1..335;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000066.1 Genbank gene 61 335 . + . ID=gene-C9F07_00410;Name=C9F07_00410;end_range=335,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00410;partial=true PYKI01000066.1 Protein Homology CDS 61 335 . + 0 ID=cds-TGE30172.1;Parent=gene-C9F07_00410;Dbxref=NCBI_GP:TGE30172.1;Name=TGE30172.1;end_range=335,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455039.1;locus_tag=C9F07_00410;partial=true;product=cytochrome O ubiquinol oxidase;protein_id=TGE30172.1;transl_table=11 ##sequence-region PYKI01003079.1 1 335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003079.1 Genbank region 1 335 . + . ID=PYKI01003079.1:1..335;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003079.1 Genbank gene 169 335 . - . ID=gene-C9F07_30850;Name=lysS;end_range=335,.;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=C9F07_30850;partial=true PYKI01003079.1 Protein Homology CDS 169 335 . - 2 ID=cds-TGD40419.1;Parent=gene-C9F07_30850;Dbxref=NCBI_GP:TGD40419.1;Name=TGD40419.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;end_range=335,.;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311789.1;locus_tag=C9F07_30850;partial=true;product=lysine--tRNA ligase;protein_id=TGD40419.1;transl_table=11 ##sequence-region PYKI01002508.1 1 335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002508.1 Genbank region 1 335 . + . ID=PYKI01002508.1:1..335;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002508.1 Genbank gene 1 127 . - . ID=gene-C9F07_24855;Name=C9F07_24855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24855;partial=true;start_range=.,1 PYKI01002508.1 Protein Homology CDS 1 127 . - 0 ID=cds-TGD50212.1;Parent=gene-C9F07_24855;Dbxref=NCBI_GP:TGD50212.1;Name=TGD50212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455244.1;locus_tag=C9F07_24855;partial=true;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=TGD50212.1;start_range=.,1;transl_table=11 PYKI01002508.1 Genbank pseudogene 187 335 . - . ID=gene-C9F07_24860;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=pseudogene;locus_tag=C9F07_24860;pseudo=true PYKI01002508.1 Protein Homology CDS 187 335 . - 2 ID=cds-C9F07_24860;Parent=gene-C9F07_24860;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=nagB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=C9F07_24860;product=glucosamine-6-phosphate deaminase;pseudo=true;transl_table=11 ##sequence-region PYKI01002953.1 1 335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002953.1 Genbank region 1 335 . + . ID=PYKI01002953.1:1..335;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002953.1 Genbank gene 1 335 . + . ID=gene-C9F07_29580;Name=C9F07_29580;end_range=335,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29580;partial=true;start_range=.,1 PYKI01002953.1 Protein Homology CDS 1 335 . + 0 ID=cds-TGD42105.1;Parent=gene-C9F07_29580;Dbxref=NCBI_GP:TGD42105.1;Name=TGD42105.1;end_range=335,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458309.1;locus_tag=C9F07_29580;partial=true;product=AsmA family protein;protein_id=TGD42105.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002487.1 1 2901 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002487.1 Genbank region 1 2901 . + . ID=PYKI01002487.1:1..2901;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002487.1 Genbank pseudogene 51 218 . + . ID=gene-C9F07_24585;Name=C9F07_24585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24585;pseudo=true PYKI01002487.1 Protein Homology CDS 51 218 . + 0 ID=cds-C9F07_24585;Parent=gene-C9F07_24585;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458384.1;locus_tag=C9F07_24585;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002487.1 Genbank gene 348 1841 . + . ID=gene-C9F07_24590;Name=C9F07_24590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24590 PYKI01002487.1 Protein Homology CDS 348 1841 . + 0 ID=cds-TGD50411.1;Parent=gene-C9F07_24590;Dbxref=NCBI_GP:TGD50411.1;Name=TGD50411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533932.1;locus_tag=C9F07_24590;product=phosphate ABC transporter substrate-binding protein;protein_id=TGD50411.1;transl_table=11 PYKI01002487.1 Genbank gene 1851 2558 . + . ID=gene-C9F07_24595;Name=C9F07_24595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24595 PYKI01002487.1 Protein Homology CDS 1851 2558 . + 0 ID=cds-TGD50412.1;Parent=gene-C9F07_24595;Dbxref=NCBI_GP:TGD50412.1;Name=TGD50412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728069.1;locus_tag=C9F07_24595;product=hypothetical protein;protein_id=TGD50412.1;transl_table=11 PYKI01002487.1 Genbank gene 2552 2901 . + . ID=gene-C9F07_24600;Name=C9F07_24600;end_range=2901,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24600;partial=true PYKI01002487.1 Protein Homology CDS 2552 2901 . + 0 ID=cds-TGD50413.1;Parent=gene-C9F07_24600;Dbxref=NCBI_GP:TGD50413.1;Name=TGD50413.1;end_range=2901,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000252750.1;locus_tag=C9F07_24600;partial=true;product=hypothetical protein;protein_id=TGD50413.1;transl_table=11 ##sequence-region PYKI01000096.1 1 334 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000096.1 Genbank region 1 334 . + . ID=PYKI01000096.1:1..334;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000096.1 Genbank gene 1 334 . + . ID=gene-C9F07_00620;Name=C9F07_00620;end_range=334,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00620;partial=true;start_range=.,1 PYKI01000096.1 Protein Homology CDS 1 334 . + 2 ID=cds-TGE30139.1;Parent=gene-C9F07_00620;Dbxref=NCBI_GP:TGE30139.1;Name=TGE30139.1;end_range=334,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457196.1;locus_tag=C9F07_00620;partial=true;product=hypothetical protein;protein_id=TGE30139.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001728.1 1 334 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001728.1 Genbank region 1 334 . + . ID=PYKI01001728.1:1..334;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001728.1 Genbank gene 1 330 . - . ID=gene-C9F07_16505;Name=C9F07_16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16505;partial=true;start_range=.,1 PYKI01001728.1 Protein Homology CDS 1 330 . - 0 ID=cds-TGD68697.1;Parent=gene-C9F07_16505;Dbxref=NCBI_GP:TGD68697.1;Name=TGD68697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=C9F07_16505;partial=true;product=2-isopropylmalate synthase;protein_id=TGD68697.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000132.1 1 334 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000132.1 Genbank region 1 334 . + . ID=PYKI01000132.1:1..334;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000132.1 Genbank pseudogene 121 334 . - . ID=gene-C9F07_00900;Name=C9F07_00900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00900;pseudo=true PYKI01000132.1 Protein Homology CDS 121 334 . - 1 ID=cds-C9F07_00900;Parent=gene-C9F07_00900;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458881.1;locus_tag=C9F07_00900;product=C4-dicarboxylate ABC transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01001682.1 1 333 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001682.1 Genbank region 1 333 . + . ID=PYKI01001682.1:1..333;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001682.1 Genbank gene 1 333 . + . ID=gene-C9F07_16075;Name=C9F07_16075;end_range=333,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16075;partial=true;start_range=.,1 PYKI01001682.1 Protein Homology CDS 1 333 . + 2 ID=cds-TGD69738.1;Parent=gene-C9F07_16075;Dbxref=NCBI_GP:TGD69738.1;Name=TGD69738.1;end_range=333,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457726.1;locus_tag=C9F07_16075;partial=true;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=TGD69738.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002441.1 1 333 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002441.1 Genbank region 1 333 . + . ID=PYKI01002441.1:1..333;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002441.1 Genbank gene 1 277 . - . ID=gene-C9F07_24125;Name=C9F07_24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24125;partial=true;start_range=.,1 PYKI01002441.1 Protein Homology CDS 1 277 . - 0 ID=cds-TGD51066.1;Parent=gene-C9F07_24125;Dbxref=NCBI_GP:TGD51066.1;Name=TGD51066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=C9F07_24125;partial=true;product=flagellar motor protein MotA;protein_id=TGD51066.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001324.1 1 333 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001324.1 Genbank region 1 333 . + . ID=PYKI01001324.1:1..333;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001324.1 Genbank gene 82 333 . + . ID=gene-C9F07_12395;Name=C9F07_12395;end_range=333,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12395;partial=true PYKI01001324.1 Protein Homology CDS 82 333 . + 0 ID=cds-TGD86035.1;Parent=gene-C9F07_12395;Dbxref=NCBI_GP:TGD86035.1;Name=TGD86035.1;end_range=333,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=C9F07_12395;partial=true;product=glycoside hydrolase 105 family protein;protein_id=TGD86035.1;transl_table=11 ##sequence-region PYKI01001902.1 1 332 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001902.1 Genbank region 1 332 . + . ID=PYKI01001902.1:1..332;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001902.1 Genbank gene 30 332 . - . ID=gene-C9F07_18325;Name=C9F07_18325;end_range=332,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18325;partial=true PYKI01001902.1 Protein Homology CDS 30 332 . - 0 ID=cds-TGD61463.1;Parent=gene-C9F07_18325;Dbxref=NCBI_GP:TGD61463.1;Name=TGD61463.1;end_range=332,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454775.1;locus_tag=C9F07_18325;partial=true;product=four-carbon acid sugar kinase family protein;protein_id=TGD61463.1;transl_table=11 ##sequence-region PYKI01003347.1 1 2893 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003347.1 Genbank region 1 2893 . + . ID=PYKI01003347.1:1..2893;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003347.1 Genbank gene 1 919 . - . ID=gene-C9F07_33680;Name=C9F07_33680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33680;partial=true;start_range=.,1 PYKI01003347.1 Protein Homology CDS 1 919 . - 0 ID=cds-TGD35041.1;Parent=gene-C9F07_33680;Dbxref=NCBI_GP:TGD35041.1;Name=TGD35041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=C9F07_33680;partial=true;product=murein DD-endopeptidase MepM;protein_id=TGD35041.1;start_range=.,1;transl_table=11 PYKI01003347.1 Genbank gene 935 1894 . - . ID=gene-C9F07_33685;Name=C9F07_33685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33685 PYKI01003347.1 Protein Homology CDS 935 1894 . - 0 ID=cds-TGD35043.1;Parent=gene-C9F07_33685;Dbxref=NCBI_GP:TGD35043.1;Name=TGD35043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456458.3;locus_tag=C9F07_33685;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=TGD35043.1;transl_table=11 PYKI01003347.1 Genbank gene 1958 2713 . + . ID=gene-C9F07_33690;Name=C9F07_33690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33690 PYKI01003347.1 Protein Homology CDS 1958 2713 . + 0 ID=cds-TGD35042.1;Parent=gene-C9F07_33690;Dbxref=NCBI_GP:TGD35042.1;Name=TGD35042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456459.1;locus_tag=C9F07_33690;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=TGD35042.1;transl_table=11 PYKI01003347.1 Genbank pseudogene 2710 2868 . + . ID=gene-C9F07_33695;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=pseudogene;gene_synonym=yebI;locus_tag=C9F07_33695;pseudo=true PYKI01003347.1 Protein Homology CDS 2710 2868 . + 0 ID=cds-C9F07_33695;Parent=gene-C9F07_33695;Note=involved in transport of zinc(II) with ZnuA and C%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=znuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456460.1;locus_tag=C9F07_33695;product=zinc ABC transporter permease;pseudo=true;transl_table=11 ##sequence-region PYKI01003273.1 1 331 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003273.1 Genbank region 1 331 . + . ID=PYKI01003273.1:1..331;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003273.1 Genbank pseudogene 1 331 . - . ID=gene-C9F07_32930;Name=C9F07_32930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32930;pseudo=true PYKI01003273.1 Protein Homology CDS 1 331 . - 1 ID=cds-C9F07_32930;Parent=gene-C9F07_32930;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457531.1;locus_tag=C9F07_32930;product=fructuronate reductase;pseudo=true;transl_table=11 ##sequence-region PYKI01002964.1 1 331 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002964.1 Genbank region 1 331 . + . ID=PYKI01002964.1:1..331;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002964.1 Genbank pseudogene 1 314 . + . ID=gene-C9F07_29715;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=pseudogene;gene_synonym=cgtA,obg,yhbZ;locus_tag=C9F07_29715;pseudo=true PYKI01002964.1 Protein Homology CDS 1 314 . + 2 ID=cds-C9F07_29715;Parent=gene-C9F07_29715;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=obgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457680.1;locus_tag=C9F07_29715;product=GTPase ObgE;pseudo=true;transl_table=11 ##sequence-region PYKI01001605.1 1 330 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001605.1 Genbank region 1 330 . + . ID=PYKI01001605.1:1..330;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001605.1 Genbank pseudogene 15 330 . - . ID=gene-C9F07_15320;Name=C9F07_15320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15320;pseudo=true PYKI01001605.1 Protein Homology CDS 15 330 . - 1 ID=cds-C9F07_15320;Parent=gene-C9F07_15320;Note=P-type%3B involved in magnesium transport into the cytoplasm%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458874.1;locus_tag=C9F07_15320;product=magnesium-translocating P-type ATPase;pseudo=true;transl_table=11 ##sequence-region PYKI01003443.1 1 329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003443.1 Genbank region 1 329 . + . ID=PYKI01003443.1:1..329;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003443.1 Genbank gene 1 329 . - . ID=gene-C9F07_34620;Name=C9F07_34620;end_range=329,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34620;partial=true;start_range=.,1 PYKI01003443.1 Protein Homology CDS 1 329 . - 1 ID=cds-TGD33424.1;Parent=gene-C9F07_34620;Dbxref=NCBI_GP:TGD33424.1;Name=TGD33424.1;end_range=329,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456055.1;locus_tag=C9F07_34620;partial=true;product=arginine:ornithine antiporter;protein_id=TGD33424.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001828.1 1 328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001828.1 Genbank region 1 328 . + . ID=PYKI01001828.1:1..328;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001828.1 Genbank gene 1 328 . + . ID=gene-C9F07_17580;Name=C9F07_17580;end_range=328,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17580;partial=true;start_range=.,1 PYKI01001828.1 Protein Homology CDS 1 328 . + 2 ID=cds-TGD64365.1;Parent=gene-C9F07_17580;Dbxref=NCBI_GP:TGD64365.1;Name=TGD64365.1;end_range=328,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458498.1;locus_tag=C9F07_17580;partial=true;product=shikimate dehydrogenase;protein_id=TGD64365.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003304.1 1 328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003304.1 Genbank region 1 328 . + . ID=PYKI01003304.1:1..328;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003304.1 Genbank gene 1 328 . - . ID=gene-C9F07_33240;Name=C9F07_33240;end_range=328,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33240;partial=true;start_range=.,1 PYKI01003304.1 Protein Homology CDS 1 328 . - 2 ID=cds-TGD36033.1;Parent=gene-C9F07_33240;Dbxref=NCBI_GP:TGD36033.1;Name=TGD36033.1;end_range=328,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458159.1;locus_tag=C9F07_33240;partial=true;product=hypothetical protein;protein_id=TGD36033.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000063.1 1 328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000063.1 Genbank region 1 328 . + . ID=PYKI01000063.1:1..328;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000063.1 Genbank gene 4 328 . + . ID=gene-C9F07_00390;Name=C9F07_00390;end_range=328,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00390;partial=true PYKI01000063.1 Protein Homology CDS 4 328 . + 0 ID=cds-TGE30174.1;Parent=gene-C9F07_00390;Dbxref=NCBI_GP:TGE30174.1;Name=TGE30174.1;Note=catalyzes the formation of 4-aminobutanoate from 4-aminobutanal%3B involved in putrescine degradation;end_range=328,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749632.1;locus_tag=C9F07_00390;partial=true;product=gamma-aminobutyraldehyde dehydrogenase;protein_id=TGE30174.1;transl_table=11 ##sequence-region PYKI01001066.1 1 328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001066.1 Genbank region 1 328 . + . ID=PYKI01001066.1:1..328;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001066.1 Genbank gene 1 281 . - . ID=gene-C9F07_09835;Name=C9F07_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09835;partial=true;start_range=.,1 PYKI01001066.1 Protein Homology CDS 1 281 . - 0 ID=cds-TGD96021.1;Parent=gene-C9F07_09835;Dbxref=NCBI_GP:TGD96021.1;Name=TGD96021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460336.1;locus_tag=C9F07_09835;partial=true;product=hypothetical protein;protein_id=TGD96021.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003410.1 1 2886 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003410.1 Genbank region 1 2886 . + . ID=PYKI01003410.1:1..2886;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003410.1 Genbank pseudogene 1 2886 . - . ID=gene-C9F07_34290;Name=C9F07_34290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34290;pseudo=true PYKI01003410.1 Protein Homology CDS 1 2886 . - 2 ID=cds-C9F07_34290;Parent=gene-C9F07_34290;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463348.1;locus_tag=C9F07_34290;product=DNA helicase;pseudo=true;transl_table=11 ##sequence-region PYKI01001959.1 1 327 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001959.1 Genbank region 1 327 . + . ID=PYKI01001959.1:1..327;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001959.1 Genbank gene 50 327 . + . ID=gene-C9F07_18920;Name=C9F07_18920;end_range=327,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18920;partial=true PYKI01001959.1 Protein Homology CDS 50 327 . + 0 ID=cds-TGD60419.1;Parent=gene-C9F07_18920;Dbxref=NCBI_GP:TGD60419.1;Name=TGD60419.1;Note=uncharacterized member of the major facilitator superfamily (MFS);end_range=327,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456102.1;locus_tag=C9F07_18920;partial=true;product=MFS transporter;protein_id=TGD60419.1;transl_table=11 ##sequence-region PYKI01000248.1 1 327 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000248.1 Genbank region 1 327 . + . ID=PYKI01000248.1:1..327;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000248.1 Genbank gene 1 219 . + . ID=gene-C9F07_01620;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=C9F07_01620;partial=true;start_range=.,1 PYKI01000248.1 Protein Homology CDS 1 219 . + 0 ID=cds-TGE27859.1;Parent=gene-C9F07_01620;Dbxref=NCBI_GP:TGE27859.1;Name=TGE27859.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=C9F07_01620;partial=true;product=preprotein translocase subunit SecE;protein_id=TGE27859.1;start_range=.,1;transl_table=11 PYKI01000248.1 Genbank gene 221 327 . + . ID=gene-C9F07_01625;Name=nusG;end_range=327,.;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=C9F07_01625;partial=true PYKI01000248.1 Protein Homology CDS 221 327 . + 0 ID=cds-TGE27860.1;Parent=gene-C9F07_01625;Dbxref=NCBI_GP:TGE27860.1;Name=TGE27860.1;Note=Modulates Rho-dependent transcription termination;end_range=327,.;gbkey=CDS;gene=nusG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=C9F07_01625;partial=true;product=transcription termination/antitermination protein NusG;protein_id=TGE27860.1;transl_table=11 ##sequence-region PYKI01000163.1 1 326 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000163.1 Genbank region 1 326 . + . ID=PYKI01000163.1:1..326;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000163.1 Genbank gene 1 326 . - . ID=gene-C9F07_01110;Name=C9F07_01110;end_range=326,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01110;partial=true;start_range=.,1 PYKI01000163.1 Protein Homology CDS 1 326 . - 1 ID=cds-TGE30065.1;Parent=gene-C9F07_01110;Dbxref=NCBI_GP:TGE30065.1;Name=TGE30065.1;end_range=326,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457364.1;locus_tag=C9F07_01110;partial=true;product=hypothetical protein;protein_id=TGE30065.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000985.1 1 325 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000985.1 Genbank region 1 325 . + . ID=PYKI01000985.1:1..325;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000985.1 Genbank gene 1 66 . + . ID=gene-C9F07_08995;Name=C9F07_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08995;partial=true;start_range=.,1 PYKI01000985.1 Protein Homology CDS 1 66 . + 0 ID=cds-TGD99508.1;Parent=gene-C9F07_08995;Dbxref=NCBI_GP:TGD99508.1;Name=TGD99508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454839.1;locus_tag=C9F07_08995;partial=true;product=acetyl-CoA carboxyl transferase;protein_id=TGD99508.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000068.1 1 325 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000068.1 Genbank region 1 325 . + . ID=PYKI01000068.1:1..325;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000068.1 Genbank gene 1 301 . + . ID=gene-C9F07_00420;Name=C9F07_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00420;partial=true;start_range=.,1 PYKI01000068.1 Protein Homology CDS 1 301 . + 1 ID=cds-TGE30171.1;Parent=gene-C9F07_00420;Dbxref=NCBI_GP:TGE30171.1;Name=TGE30171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014343985.1;locus_tag=C9F07_00420;partial=true;product=hypothetical protein;protein_id=TGE30171.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000586.1 1 324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000586.1 Genbank region 1 324 . + . ID=PYKI01000586.1:1..324;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000586.1 Genbank pseudogene 1 264 . + . ID=gene-C9F07_04980;Name=C9F07_04980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04980;pseudo=true PYKI01000586.1 Protein Homology CDS 1 264 . + 0 ID=cds-C9F07_04980;Parent=gene-C9F07_04980;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454781.1;locus_tag=C9F07_04980;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002241.1 1 324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002241.1 Genbank region 1 324 . + . ID=PYKI01002241.1:1..324;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002241.1 Genbank gene 1 324 . + . ID=gene-C9F07_21905;Name=C9F07_21905;end_range=324,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21905;partial=true;start_range=.,1 PYKI01002241.1 Protein Homology CDS 1 324 . + 0 ID=cds-TGD55966.1;Parent=gene-C9F07_21905;Dbxref=NCBI_GP:TGD55966.1;Name=TGD55966.1;end_range=324,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458784.1;locus_tag=C9F07_21905;partial=true;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=TGD55966.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001092.1 1 324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001092.1 Genbank region 1 324 . + . ID=PYKI01001092.1:1..324;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001092.1 Genbank gene 1 324 . - . ID=gene-C9F07_10170;Name=C9F07_10170;end_range=324,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10170;partial=true;start_range=.,1 PYKI01001092.1 Protein Homology CDS 1 324 . - 2 ID=cds-TGD95479.1;Parent=gene-C9F07_10170;Dbxref=NCBI_GP:TGD95479.1;Name=TGD95479.1;end_range=324,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=C9F07_10170;partial=true;product=hypothetical protein;protein_id=TGD95479.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000895.1 1 324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000895.1 Genbank region 1 324 . + . ID=PYKI01000895.1:1..324;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000895.1 Genbank gene 22 324 . + . ID=gene-C9F07_08200;Name=C9F07_08200;end_range=324,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08200;partial=true PYKI01000895.1 Protein Homology CDS 22 324 . + 0 ID=cds-TGE03453.1;Parent=gene-C9F07_08200;Dbxref=NCBI_GP:TGE03453.1;Name=TGE03453.1;end_range=324,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457306.1;locus_tag=C9F07_08200;partial=true;product=hypothetical protein;protein_id=TGE03453.1;transl_table=11 ##sequence-region PYKI01003004.1 1 324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003004.1 Genbank region 1 324 . + . ID=PYKI01003004.1:1..324;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003004.1 Genbank gene 1 206 . + . ID=gene-C9F07_30110;Name=C9F07_30110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30110;partial=true;start_range=.,1 PYKI01003004.1 Protein Homology CDS 1 206 . + 2 ID=cds-TGD41222.1;Parent=gene-C9F07_30110;Dbxref=NCBI_GP:TGD41222.1;Name=TGD41222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461865.1;locus_tag=C9F07_30110;partial=true;product=hypothetical protein;protein_id=TGD41222.1;start_range=.,1;transl_table=11 PYKI01003004.1 Genbank gene 218 324 . + . ID=gene-C9F07_30115;Name=C9F07_30115;end_range=324,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30115;partial=true PYKI01003004.1 Protein Homology CDS 218 324 . + 0 ID=cds-TGD41223.1;Parent=gene-C9F07_30115;Dbxref=NCBI_GP:TGD41223.1;Name=TGD41223.1;end_range=324,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461864.1;locus_tag=C9F07_30115;partial=true;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=TGD41223.1;transl_table=11 ##sequence-region PYKI01002027.1 1 2884 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002027.1 Genbank region 1 2884 . + . ID=PYKI01002027.1:1..2884;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002027.1 Genbank gene 1 747 . + . ID=gene-C9F07_19560;Name=C9F07_19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19560;partial=true;start_range=.,1 PYKI01002027.1 Protein Homology CDS 1 747 . + 0 ID=cds-TGD60045.1;Parent=gene-C9F07_19560;Dbxref=NCBI_GP:TGD60045.1;Name=TGD60045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457978.1;locus_tag=C9F07_19560;partial=true;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=TGD60045.1;start_range=.,1;transl_table=11 PYKI01002027.1 Genbank gene 741 1784 . + . ID=gene-C9F07_19565;Name=C9F07_19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19565 PYKI01002027.1 Protein Homology CDS 741 1784 . + 0 ID=cds-TGD60046.1;Parent=gene-C9F07_19565;Dbxref=NCBI_GP:TGD60046.1;Name=TGD60046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457977.1;locus_tag=C9F07_19565;product=autoinducer 2 ABC transporter permease LsrC;protein_id=TGD60046.1;transl_table=11 PYKI01002027.1 Genbank gene 1781 2782 . + . ID=gene-C9F07_19570;Name=C9F07_19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19570 PYKI01002027.1 Protein Homology CDS 1781 2782 . + 0 ID=cds-TGD60047.1;Parent=gene-C9F07_19570;Dbxref=NCBI_GP:TGD60047.1;Name=TGD60047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=C9F07_19570;product=autoinducer 2 ABC transporter permease LsrD;protein_id=TGD60047.1;transl_table=11 ##sequence-region PYKI01000200.1 1 323 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000200.1 Genbank region 1 323 . + . ID=PYKI01000200.1:1..323;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000200.1 Genbank gene 1 323 . - . ID=gene-C9F07_01340;Name=C9F07_01340;end_range=323,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01340;partial=true;start_range=.,1 PYKI01000200.1 Protein Homology CDS 1 323 . - 2 ID=cds-TGE30026.1;Parent=gene-C9F07_01340;Dbxref=NCBI_GP:TGE30026.1;Name=TGE30026.1;end_range=323,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457368.1;locus_tag=C9F07_01340;partial=true;product=hypothetical protein;protein_id=TGE30026.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003562.1 1 323 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003562.1 Genbank region 1 323 . + . ID=PYKI01003562.1:1..323;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003562.1 Genbank gene 1 144 . + . ID=gene-C9F07_35970;Name=spr;gbkey=Gene;gene=spr;gene_biotype=protein_coding;gene_synonym=yeiV;locus_tag=C9F07_35970;partial=true;start_range=.,1 PYKI01003562.1 Protein Homology CDS 1 144 . + 0 ID=cds-TGD30475.1;Parent=gene-C9F07_35970;Dbxref=NCBI_GP:TGD30475.1;Name=TGD30475.1;Note=mutational suppressor of prc thermosensitivity;gbkey=CDS;gene=spr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311094.1;locus_tag=C9F07_35970;partial=true;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=TGD30475.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000412.1 1 322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000412.1 Genbank region 1 322 . + . ID=PYKI01000412.1:1..322;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000412.1 Genbank pseudogene 95 301 . + . ID=gene-C9F07_03165;Name=C9F07_03165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03165;pseudo=true PYKI01000412.1 Protein Homology CDS 95 301 . + 0 ID=cds-C9F07_03165;Parent=gene-C9F07_03165;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001555701.1;locus_tag=C9F07_03165;product=DNA-binding protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001530.1 1 322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001530.1 Genbank region 1 322 . + . ID=PYKI01001530.1:1..322;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001530.1 Genbank gene 1 322 . - . ID=gene-C9F07_14605;Name=recA;end_range=322,.;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=C9F07_14605;partial=true;start_range=.,1 PYKI01001530.1 Protein Homology CDS 1 322 . - 2 ID=cds-TGD76355.1;Parent=gene-C9F07_14605;Dbxref=NCBI_GP:TGD76355.1;Name=TGD76355.1;end_range=322,.;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457222.1;locus_tag=C9F07_14605;partial=true;product=recombinase RecA;protein_id=TGD76355.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000236.1 1 322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000236.1 Genbank region 1 322 . + . ID=PYKI01000236.1:1..322;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000236.1 Genbank gene 1 116 . - . ID=gene-C9F07_01540;Name=C9F07_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01540;partial=true;start_range=.,1 PYKI01000236.1 Protein Homology CDS 1 116 . - 0 ID=cds-TGE27871.1;Parent=gene-C9F07_01540;Dbxref=NCBI_GP:TGE27871.1;Name=TGE27871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456308.1;locus_tag=C9F07_01540;partial=true;product=potassium/proton antiporter;protein_id=TGE27871.1;start_range=.,1;transl_table=11 PYKI01000236.1 Genbank gene 213 322 . - . ID=gene-C9F07_01545;Name=C9F07_01545;end_range=322,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01545;partial=true PYKI01000236.1 Protein Homology CDS 213 322 . - 2 ID=cds-TGE27872.1;Parent=gene-C9F07_01545;Dbxref=NCBI_GP:TGE27872.1;Name=TGE27872.1;end_range=322,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456307.1;locus_tag=C9F07_01545;partial=true;product=muramoyltetrapeptide carboxypeptidase;protein_id=TGE27872.1;transl_table=11 ##sequence-region PYKI01002479.1 1 322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002479.1 Genbank region 1 322 . + . ID=PYKI01002479.1:1..322;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002479.1 Genbank gene 175 322 . + . ID=gene-C9F07_24475;Name=C9F07_24475;end_range=322,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24475;partial=true PYKI01002479.1 Protein Homology CDS 175 322 . + 0 ID=cds-TGD50512.1;Parent=gene-C9F07_24475;Dbxref=NCBI_GP:TGD50512.1;Name=TGD50512.1;Note=catalyzes the formation of 2-oxobutanoate from L-threonine%3B catabolic;end_range=322,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457631.1;locus_tag=C9F07_24475;partial=true;product=threonine ammonia-lyase;protein_id=TGD50512.1;transl_table=11 ##sequence-region PYKI01001999.1 1 322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001999.1 Genbank region 1 322 . + . ID=PYKI01001999.1:1..322;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001999.1 Genbank gene 1 322 . + . ID=gene-C9F07_19275;Name=C9F07_19275;end_range=322,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19275;partial=true;start_range=.,1 PYKI01001999.1 Protein Homology CDS 1 322 . + 0 ID=cds-TGD60156.1;Parent=gene-C9F07_19275;Dbxref=NCBI_GP:TGD60156.1;Name=TGD60156.1;end_range=322,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455395.1;locus_tag=C9F07_19275;partial=true;product=MFS transporter;protein_id=TGD60156.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002717.1 1 322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002717.1 Genbank region 1 322 . + . ID=PYKI01002717.1:1..322;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002717.1 Genbank gene 1 322 . - . ID=gene-C9F07_27095;Name=C9F07_27095;end_range=322,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27095;partial=true;start_range=.,1 PYKI01002717.1 Protein Homology CDS 1 322 . - 1 ID=cds-TGD47797.1;Parent=gene-C9F07_27095;Dbxref=NCBI_GP:TGD47797.1;Name=TGD47797.1;Note=necessary for the synthesis of all three hydrogenase isoenzymes;end_range=322,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457251.1;locus_tag=C9F07_27095;partial=true;product=hydrogenase formation protein HypD;protein_id=TGD47797.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001966.1 1 321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001966.1 Genbank region 1 321 . + . ID=PYKI01001966.1:1..321;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001966.1 Genbank gene 113 277 . - . ID=gene-C9F07_18965;Name=C9F07_18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18965 PYKI01001966.1 Protein Homology CDS 113 277 . - 0 ID=cds-TGD60354.1;Parent=gene-C9F07_18965;Dbxref=NCBI_GP:TGD60354.1;Name=TGD60354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991980.1;locus_tag=C9F07_18965;product=hypothetical protein;protein_id=TGD60354.1;transl_table=11 ##sequence-region PYKI01002082.1 1 2880 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002082.1 Genbank region 1 2880 . + . ID=PYKI01002082.1:1..2880;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002082.1 Genbank gene 1 280 . + . ID=gene-C9F07_20185;Name=C9F07_20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20185;partial=true;start_range=.,1 PYKI01002082.1 Protein Homology CDS 1 280 . + 1 ID=cds-TGD59301.1;Parent=gene-C9F07_20185;Dbxref=NCBI_GP:TGD59301.1;Name=TGD59301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459345.3;locus_tag=C9F07_20185;partial=true;product=multidrug transporter;protein_id=TGD59301.1;start_range=.,1;transl_table=11 PYKI01002082.1 Genbank gene 348 707 . - . ID=gene-C9F07_20190;Name=C9F07_20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20190 PYKI01002082.1 Protein Homology CDS 348 707 . - 0 ID=cds-TGD59302.1;Parent=gene-C9F07_20190;Dbxref=NCBI_GP:TGD59302.1;Name=TGD59302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=C9F07_20190;product=DUF4156 domain-containing protein;protein_id=TGD59302.1;transl_table=11 PYKI01002082.1 Genbank gene 765 989 . - . ID=gene-C9F07_20195;Name=C9F07_20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20195 PYKI01002082.1 Protein Homology CDS 765 989 . - 0 ID=cds-TGD59303.1;Parent=gene-C9F07_20195;Dbxref=NCBI_GP:TGD59303.1;Name=TGD59303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=C9F07_20195;product=hypothetical protein;protein_id=TGD59303.1;transl_table=11 PYKI01002082.1 Genbank gene 1000 1641 . - . ID=gene-C9F07_20200;Name=C9F07_20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20200 PYKI01002082.1 Protein Homology CDS 1000 1641 . - 0 ID=cds-TGD59304.1;Parent=gene-C9F07_20200;Dbxref=NCBI_GP:TGD59304.1;Name=TGD59304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=C9F07_20200;product=helix-turn-helix transcriptional regulator;protein_id=TGD59304.1;transl_table=11 PYKI01002082.1 Genbank gene 1785 2309 . - . ID=gene-C9F07_20205;Name=C9F07_20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20205 PYKI01002082.1 Protein Homology CDS 1785 2309 . - 0 ID=cds-TGD59305.1;Parent=gene-C9F07_20205;Dbxref=NCBI_GP:TGD59305.1;Name=TGD59305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=C9F07_20205;product=outer membrane protein;protein_id=TGD59305.1;transl_table=11 ##sequence-region PYKI01003062.1 1 321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003062.1 Genbank region 1 321 . + . ID=PYKI01003062.1:1..321;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003062.1 Genbank gene 1 321 . + . ID=gene-C9F07_30710;Name=C9F07_30710;end_range=321,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30710;partial=true;start_range=.,1 PYKI01003062.1 Protein Homology CDS 1 321 . + 0 ID=cds-TGD40961.1;Parent=gene-C9F07_30710;Dbxref=NCBI_GP:TGD40961.1;Name=TGD40961.1;end_range=321,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=C9F07_30710;partial=true;product=MFS transporter;protein_id=TGD40961.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002107.1 1 321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002107.1 Genbank region 1 321 . + . ID=PYKI01002107.1:1..321;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002107.1 Genbank pseudogene 75 321 . + . ID=gene-C9F07_20450;Name=C9F07_20450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20450;pseudo=true PYKI01002107.1 Protein Homology CDS 75 321 . + 0 ID=cds-C9F07_20450;Parent=gene-C9F07_20450;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456866.1;locus_tag=C9F07_20450;product=NADH-quinone oxidoreductase subunit F;pseudo=true;transl_table=11 ##sequence-region PYKI01002384.1 1 321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002384.1 Genbank region 1 321 . + . ID=PYKI01002384.1:1..321;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002384.1 Genbank pseudogene 39 321 . - . ID=gene-C9F07_23445;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=pseudogene;gene_synonym=yahU;locus_tag=C9F07_23445;pseudo=true PYKI01002384.1 Protein Homology CDS 39 321 . - 1 ID=cds-C9F07_23445;Parent=gene-C9F07_23445;Note=catalyzes the formation of propionyl-CoA using propionate as a substrate%3B PrpE from Ralstonia solanacearum can produce acetyl-%2C propionyl-%2C butyryl- and acrylyl-coenzyme A%2C and Salmonella enterica produces propionyl- and butyryl-coenzyme A%3B not expressed in Escherichia coli when grown on propionate/minimal media%3B ATP-dependent%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=prpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=C9F07_23445;product=propionyl-CoA synthetase;pseudo=true;transl_table=11 ##sequence-region PYKI01001167.1 1 320 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001167.1 Genbank region 1 320 . + . ID=PYKI01001167.1:1..320;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001167.1 Genbank gene 1 320 . - . ID=gene-C9F07_10905;Name=C9F07_10905;end_range=320,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10905;partial=true;start_range=.,1 PYKI01001167.1 Protein Homology CDS 1 320 . - 0 ID=cds-TGD93156.1;Parent=gene-C9F07_10905;Dbxref=NCBI_GP:TGD93156.1;Name=TGD93156.1;Note=part of the MetNIQ methionine uptake system;end_range=320,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=C9F07_10905;partial=true;product=DL-methionine transporter permease subunit;protein_id=TGD93156.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000116.1 1 320 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000116.1 Genbank region 1 320 . + . ID=PYKI01000116.1:1..320;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000116.1 Genbank gene 1 320 . - . ID=gene-C9F07_00795;Name=C9F07_00795;end_range=320,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00795;partial=true;start_range=.,1 PYKI01000116.1 Protein Homology CDS 1 320 . - 0 ID=cds-TGE30108.1;Parent=gene-C9F07_00795;Dbxref=NCBI_GP:TGE30108.1;Name=TGE30108.1;Note=catalyzes the formation of acetaldehyde from ethanolamine;end_range=320,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456992.1;locus_tag=C9F07_00795;partial=true;product=ethanolamine ammonia lyase small subunit;protein_id=TGE30108.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001970.1 1 320 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001970.1 Genbank region 1 320 . + . ID=PYKI01001970.1:1..320;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001970.1 Genbank gene 1 320 . - . ID=gene-C9F07_19005;Name=C9F07_19005;end_range=320,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19005;partial=true;start_range=.,1 PYKI01001970.1 Protein Homology CDS 1 320 . - 1 ID=cds-TGD60308.1;Parent=gene-C9F07_19005;Dbxref=NCBI_GP:TGD60308.1;Name=TGD60308.1;end_range=320,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455993.1;locus_tag=C9F07_19005;partial=true;product=MFS transporter;protein_id=TGD60308.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003176.1 1 320 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003176.1 Genbank region 1 320 . + . ID=PYKI01003176.1:1..320;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003176.1 Genbank pseudogene 47 320 . - . ID=gene-C9F07_31860;Name=C9F07_31860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31860;pseudo=true PYKI01003176.1 Protein Homology CDS 47 320 . - 1 ID=cds-C9F07_31860;Parent=gene-C9F07_31860;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457412.1;locus_tag=C9F07_31860;product=2-deoxy-D-gluconate 3-dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01000681.1 1 319 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000681.1 Genbank region 1 319 . + . ID=PYKI01000681.1:1..319;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000681.1 Genbank gene 1 319 . + . ID=gene-C9F07_05920;Name=C9F07_05920;end_range=319,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05920;partial=true;start_range=.,1 PYKI01000681.1 Protein Homology CDS 1 319 . + 2 ID=cds-TGE11524.1;Parent=gene-C9F07_05920;Dbxref=NCBI_GP:TGE11524.1;Name=TGE11524.1;end_range=319,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132887.1;locus_tag=C9F07_05920;partial=true;product=hypothetical protein;protein_id=TGE11524.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001285.1 1 319 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001285.1 Genbank region 1 319 . + . ID=PYKI01001285.1:1..319;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001285.1 Genbank pseudogene 1 248 . - . ID=gene-C9F07_12040;Name=C9F07_12040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12040;pseudo=true PYKI01001285.1 Protein Homology CDS 1 248 . - 0 ID=cds-C9F07_12040;Parent=gene-C9F07_12040;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455093.1;locus_tag=C9F07_12040;product=copper-transporting ATPase;pseudo=true;transl_table=11 ##sequence-region PYKI01000301.1 1 2880 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000301.1 Genbank region 1 2880 . + . ID=PYKI01000301.1:1..2880;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000301.1 Genbank gene 1 206 . + . ID=gene-C9F07_01985;Name=C9F07_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01985;partial=true;start_range=.,1 PYKI01000301.1 Protein Homology CDS 1 206 . + 2 ID=cds-TGE27797.1;Parent=gene-C9F07_01985;Dbxref=NCBI_GP:TGE27797.1;Name=TGE27797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=C9F07_01985;partial=true;product=MFS transporter;protein_id=TGE27797.1;start_range=.,1;transl_table=11 PYKI01000301.1 Genbank gene 221 1423 . + . ID=gene-C9F07_01990;Name=C9F07_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01990 PYKI01000301.1 Protein Homology CDS 221 1423 . + 0 ID=cds-TGE27798.1;Parent=gene-C9F07_01990;Dbxref=NCBI_GP:TGE27798.1;Name=TGE27798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=C9F07_01990;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=TGE27798.1;transl_table=11 PYKI01000301.1 Genbank gene 1523 1753 . - . ID=gene-C9F07_01995;Name=C9F07_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01995 PYKI01000301.1 Protein Homology CDS 1523 1753 . - 0 ID=cds-TGE27799.1;Parent=gene-C9F07_01995;Dbxref=NCBI_GP:TGE27799.1;Name=TGE27799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526363.1;locus_tag=C9F07_01995;product=hypothetical protein;protein_id=TGE27799.1;transl_table=11 PYKI01000301.1 Genbank gene 1833 2880 . + . ID=gene-C9F07_02000;Name=C9F07_02000;end_range=2880,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02000;partial=true PYKI01000301.1 Protein Homology CDS 1833 2880 . + 0 ID=cds-TGE27800.1;Parent=gene-C9F07_02000;Dbxref=NCBI_GP:TGE27800.1;Name=TGE27800.1;end_range=2880,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=C9F07_02000;partial=true;product=DNA gyrase subunit A;protein_id=TGE27800.1;transl_table=11 ##sequence-region PYKI01001139.1 1 318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001139.1 Genbank region 1 318 . + . ID=PYKI01001139.1:1..318;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001139.1 Genbank gene 118 318 . + . ID=gene-C9F07_10610;Name=C9F07_10610;end_range=318,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10610;partial=true PYKI01001139.1 Protein Homology CDS 118 318 . + 0 ID=cds-TGD94310.1;Parent=gene-C9F07_10610;Dbxref=NCBI_GP:TGD94310.1;Name=TGD94310.1;end_range=318,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=C9F07_10610;partial=true;product=DNA-directed RNA polymerase subunit omega;protein_id=TGD94310.1;transl_table=11 ##sequence-region PYKI01000058.1 1 318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000058.1 Genbank region 1 318 . + . ID=PYKI01000058.1:1..318;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000058.1 Genbank pseudogene 46 318 . - . ID=gene-C9F07_00350;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=pseudogene;locus_tag=C9F07_00350;pseudo=true PYKI01000058.1 Protein Homology CDS 46 318 . - 0 ID=cds-C9F07_00350;Parent=gene-C9F07_00350;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=rlmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=C9F07_00350;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;pseudo=true;transl_table=11 ##sequence-region PYKI01003027.1 1 318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003027.1 Genbank region 1 318 . + . ID=PYKI01003027.1:1..318;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003027.1 Genbank gene 92 318 . - . ID=gene-C9F07_30390;Name=C9F07_30390;end_range=318,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30390;partial=true PYKI01003027.1 Protein Homology CDS 92 318 . - 2 ID=cds-TGD41097.1;Parent=gene-C9F07_30390;Dbxref=NCBI_GP:TGD41097.1;Name=TGD41097.1;Note=activates sgrS under glucose-phosphate stress conditions;end_range=318,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=C9F07_30390;partial=true;product=transcriptional regulator SgrR;protein_id=TGD41097.1;transl_table=11 ##sequence-region PYKI01002656.1 1 318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002656.1 Genbank region 1 318 . + . ID=PYKI01002656.1:1..318;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002656.1 Genbank gene 1 318 . + . ID=gene-C9F07_26430;Name=C9F07_26430;end_range=318,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26430;partial=true;start_range=.,1 PYKI01002656.1 Protein Homology CDS 1 318 . + 1 ID=cds-TGD49345.1;Parent=gene-C9F07_26430;Dbxref=NCBI_GP:TGD49345.1;Name=TGD49345.1;end_range=318,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462038.1;locus_tag=C9F07_26430;partial=true;product=hypothetical protein;protein_id=TGD49345.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000580.1 1 318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000580.1 Genbank region 1 318 . + . ID=PYKI01000580.1:1..318;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000580.1 Genbank gene 1 318 . - . ID=gene-C9F07_04910;Name=C9F07_04910;end_range=318,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04910;partial=true;start_range=.,1 PYKI01000580.1 Protein Homology CDS 1 318 . - 0 ID=cds-TGE14430.1;Parent=gene-C9F07_04910;Dbxref=NCBI_GP:TGE14430.1;Name=TGE14430.1;Note=involved in the transporte of L-asparagine;end_range=318,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455912.1;locus_tag=C9F07_04910;partial=true;product=amino acid permease;protein_id=TGE14430.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000033.1 1 318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000033.1 Genbank region 1 318 . + . ID=PYKI01000033.1:1..318;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000033.1 Genbank pseudogene 1 292 . + . ID=gene-C9F07_00190;Name=C9F07_00190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00190;pseudo=true PYKI01000033.1 Protein Homology CDS 1 292 . + 1 ID=cds-C9F07_00190;Parent=gene-C9F07_00190;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455332.1;locus_tag=C9F07_00190;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002229.1 1 318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002229.1 Genbank region 1 318 . + . ID=PYKI01002229.1:1..318;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002229.1 Genbank gene 1 318 . - . ID=gene-C9F07_21745;Name=C9F07_21745;end_range=318,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21745;partial=true;start_range=.,1 PYKI01002229.1 Protein Homology CDS 1 318 . - 2 ID=cds-TGD56200.1;Parent=gene-C9F07_21745;Dbxref=NCBI_GP:TGD56200.1;Name=TGD56200.1;Note=cleaves DNA 25 basepairs downstream from the recognition site;end_range=318,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=C9F07_21745;partial=true;product=type III restriction endonuclease subunit R;protein_id=TGD56200.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000977.1 1 318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000977.1 Genbank region 1 318 . + . ID=PYKI01000977.1:1..318;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000977.1 Genbank pseudogene 1 318 . + . ID=gene-C9F07_08915;Name=C9F07_08915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08915;pseudo=true PYKI01000977.1 Protein Homology CDS 1 318 . + 0 ID=cds-C9F07_08915;Parent=gene-C9F07_08915;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=C9F07_08915;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000826.1 1 318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000826.1 Genbank region 1 318 . + . ID=PYKI01000826.1:1..318;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000826.1 Genbank pseudogene 1 243 . - . ID=gene-C9F07_07525;Name=C9F07_07525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07525;pseudo=true PYKI01000826.1 Protein Homology CDS 1 243 . - 0 ID=cds-C9F07_07525;Parent=gene-C9F07_07525;Note=cetylates the wobble base C34 of the elongation-specific methionine tRNA%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457019.1;locus_tag=C9F07_07525;product=tRNA cytosine(34) acetyltransferase TmcA;pseudo=true;transl_table=11 ##sequence-region PYKI01002006.1 1 318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002006.1 Genbank region 1 318 . + . ID=PYKI01002006.1:1..318;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002006.1 Genbank pseudogene 25 246 . + . ID=gene-C9F07_19345;Name=C9F07_19345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19345;pseudo=true PYKI01002006.1 Protein Homology CDS 25 246 . + 0 ID=cds-C9F07_19345;Parent=gene-C9F07_19345;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455720.1;locus_tag=C9F07_19345;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003349.1 1 2875 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003349.1 Genbank region 1 2875 . + . ID=PYKI01003349.1:1..2875;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003349.1 Genbank gene 1 670 . - . ID=gene-C9F07_33705;Name=C9F07_33705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33705;partial=true;start_range=.,1 PYKI01003349.1 Protein Homology CDS 1 670 . - 0 ID=cds-TGD35029.1;Parent=gene-C9F07_33705;Dbxref=NCBI_GP:TGD35029.1;Name=TGD35029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=C9F07_33705;partial=true;product=hydrolase;protein_id=TGD35029.1;start_range=.,1;transl_table=11 PYKI01003349.1 Genbank gene 761 1144 . + . ID=gene-C9F07_33710;Name=C9F07_33710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33710 PYKI01003349.1 Protein Homology CDS 761 1144 . + 0 ID=cds-TGD35030.1;Parent=gene-C9F07_33710;Dbxref=NCBI_GP:TGD35030.1;Name=TGD35030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455207.1;locus_tag=C9F07_33710;product=fluoride efflux transporter CrcB;protein_id=TGD35030.1;transl_table=11 PYKI01003349.1 Genbank gene 1203 1412 . - . ID=gene-C9F07_33715;Name=C9F07_33715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33715 PYKI01003349.1 Protein Homology CDS 1203 1412 . - 0 ID=cds-TGD35031.1;Parent=gene-C9F07_33715;Dbxref=NCBI_GP:TGD35031.1;Name=TGD35031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455206.1;locus_tag=C9F07_33715;product=cold-shock protein;protein_id=TGD35031.1;transl_table=11 PYKI01003349.1 Genbank gene 1600 2172 . - . ID=gene-C9F07_33720;Name=pagp;gbkey=Gene;gene=pagp;gene_biotype=protein_coding;locus_tag=C9F07_33720 PYKI01003349.1 Protein Homology CDS 1600 2172 . - 0 ID=cds-TGD35033.1;Parent=gene-C9F07_33720;Dbxref=NCBI_GP:TGD35033.1;Name=TGD35033.1;gbkey=CDS;gene=pagp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455205.1;locus_tag=C9F07_33720;product=lipid IV(A) palmitoyltransferase PagP;protein_id=TGD35033.1;transl_table=11 PYKI01003349.1 Genbank pseudogene 2308 2489 . - . ID=gene-C9F07_33725;Name=C9F07_33725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33725;pseudo=true PYKI01003349.1 Protein Homology CDS 2308 2489 . - 0 ID=cds-C9F07_33725;Parent=gene-C9F07_33725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002948650.1;locus_tag=C9F07_33725;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01003349.1 Genbank gene 2550 2875 . + . ID=gene-C9F07_33730;Name=dcuC;end_range=2875,.;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=C9F07_33730;partial=true PYKI01003349.1 Protein Homology CDS 2550 2875 . + 0 ID=cds-TGD35032.1;Parent=gene-C9F07_33730;Dbxref=NCBI_GP:TGD35032.1;Name=TGD35032.1;Note=responsible for the transport of C4-dicarboxylates during anaerobic growth;end_range=2875,.;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455204.1;locus_tag=C9F07_33730;partial=true;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=TGD35032.1;transl_table=11 ##sequence-region PYKI01000666.1 1 317 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000666.1 Genbank region 1 317 . + . ID=PYKI01000666.1:1..317;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000666.1 Genbank gene 1 317 . - . ID=gene-C9F07_05815;Name=C9F07_05815;end_range=317,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05815;partial=true;start_range=.,1 PYKI01000666.1 Protein Homology CDS 1 317 . - 0 ID=cds-TGE11895.1;Parent=gene-C9F07_05815;Dbxref=NCBI_GP:TGE11895.1;Name=TGE11895.1;end_range=317,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456353.1;locus_tag=C9F07_05815;partial=true;product=hypothetical protein;protein_id=TGE11895.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003236.1 1 317 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003236.1 Genbank region 1 317 . + . ID=PYKI01003236.1:1..317;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003236.1 Genbank gene 141 317 . + . ID=gene-C9F07_32595;Name=C9F07_32595;end_range=317,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32595;partial=true PYKI01003236.1 Protein Homology CDS 141 317 . + 0 ID=cds-TGD36485.1;Parent=gene-C9F07_32595;Dbxref=NCBI_GP:TGD36485.1;Name=TGD36485.1;Note=involved in the transport of aldohexuronates;end_range=317,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457529.1;locus_tag=C9F07_32595;partial=true;product=MFS transporter;protein_id=TGD36485.1;transl_table=11 ##sequence-region PYKI01000946.1 1 317 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000946.1 Genbank region 1 317 . + . ID=PYKI01000946.1:1..317;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000946.1 Genbank gene 1 317 . + . ID=gene-C9F07_08615;Name=C9F07_08615;end_range=317,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08615;partial=true;start_range=.,1 PYKI01000946.1 Protein Homology CDS 1 317 . + 0 ID=cds-TGE01621.1;Parent=gene-C9F07_08615;Dbxref=NCBI_GP:TGE01621.1;Name=TGE01621.1;Note=c-di-GMP phosphodiesterase%3B probably degrades signalling molecule c-di-GMP;end_range=317,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455794.1;locus_tag=C9F07_08615;partial=true;product=cyclic di-GMP phosphodiesterase;protein_id=TGE01621.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000224.1 1 316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000224.1 Genbank region 1 316 . + . ID=PYKI01000224.1:1..316;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000224.1 Genbank pseudogene 124 267 . + . ID=gene-C9F07_01465;Name=C9F07_01465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01465;pseudo=true PYKI01000224.1 Protein Homology CDS 124 267 . + 0 ID=cds-C9F07_01465;Parent=gene-C9F07_01465;Note=membrane protein conferring nickel and cobalt resistance%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=C9F07_01465;product=nickel/cobalt efflux protein RcnA;pseudo=true;transl_table=11 ##sequence-region PYKI01000001.1 1 316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000001.1 Genbank region 1 316 . + . ID=PYKI01000001.1:1..316;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000001.1 Genbank gene 1 264 . - . ID=gene-C9F07_00005;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=C9F07_00005;partial=true;start_range=.,1 PYKI01000001.1 Protein Homology CDS 1 264 . - 0 ID=cds-TGE30225.1;Parent=gene-C9F07_00005;Dbxref=NCBI_GP:TGE30225.1;Name=TGE30225.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;gbkey=CDS;gene=hflB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457675.1;locus_tag=C9F07_00005;partial=true;product=ATP-dependent metalloprotease;protein_id=TGE30225.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002952.1 1 316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002952.1 Genbank region 1 316 . + . ID=PYKI01002952.1:1..316;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002952.1 Genbank gene 131 316 . - . ID=gene-C9F07_29575;Name=C9F07_29575;end_range=316,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29575;partial=true PYKI01002952.1 Protein Homology CDS 131 316 . - 0 ID=cds-TGD42202.1;Parent=gene-C9F07_29575;Dbxref=NCBI_GP:TGD42202.1;Name=TGD42202.1;end_range=316,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455601.1;locus_tag=C9F07_29575;partial=true;product=2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase;protein_id=TGD42202.1;transl_table=11 ##sequence-region PYKI01002715.1 1 316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002715.1 Genbank region 1 316 . + . ID=PYKI01002715.1:1..316;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002715.1 Genbank pseudogene 1 295 . - . ID=gene-C9F07_27085;Name=C9F07_27085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27085;pseudo=true PYKI01002715.1 Protein Homology CDS 1 295 . - 0 ID=cds-C9F07_27085;Parent=gene-C9F07_27085;Note=septal ring protein%2C suppressor of prc%2C minor lipoprotein%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=C9F07_27085;product=septal ring lytic transglycosylase RlpA;pseudo=true;transl_table=11 ##sequence-region PYKI01001674.1 1 316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001674.1 Genbank region 1 316 . + . ID=PYKI01001674.1:1..316;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001674.1 Genbank pseudogene 1 219 . - . ID=gene-C9F07_15990;Name=C9F07_15990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15990;pseudo=true PYKI01001674.1 Protein Homology CDS 1 219 . - 0 ID=cds-C9F07_15990;Parent=gene-C9F07_15990;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456648.1;locus_tag=C9F07_15990;product=colanic acid biosynthesis protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000930.1 1 316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000930.1 Genbank region 1 316 . + . ID=PYKI01000930.1:1..316;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000930.1 Genbank pseudogene 52 316 . + . ID=gene-C9F07_08490;Name=C9F07_08490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08490;pseudo=true PYKI01000930.1 Protein Homology CDS 52 316 . + 0 ID=cds-C9F07_08490;Parent=gene-C9F07_08490;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454677.1;locus_tag=C9F07_08490;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002721.1 1 2874 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002721.1 Genbank region 1 2874 . + . ID=PYKI01002721.1:1..2874;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002721.1 Genbank gene 1 1432 . - . ID=gene-C9F07_27130;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=C9F07_27130;partial=true;start_range=.,1 PYKI01002721.1 Protein Homology CDS 1 1432 . - 0 ID=cds-TGD47574.1;Parent=gene-C9F07_27130;Dbxref=NCBI_GP:TGD47574.1;Name=TGD47574.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=C9F07_27130;partial=true;product=transcription termination/antitermination protein NusA;protein_id=TGD47574.1;start_range=.,1;transl_table=11 PYKI01002721.1 Genbank gene 1460 1924 . - . ID=gene-C9F07_27135;Name=C9F07_27135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27135 PYKI01002721.1 Protein Homology CDS 1460 1924 . - 0 ID=cds-TGD47575.1;Parent=gene-C9F07_27135;Dbxref=NCBI_GP:TGD47575.1;Name=TGD47575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014171786.1;locus_tag=C9F07_27135;product=ribosome maturation factor;protein_id=TGD47575.1;transl_table=11 PYKI01002721.1 Genbank gene 2120 2196 . - . ID=gene-C9F07_27140;Name=C9F07_27140;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_27140 PYKI01002721.1 tRNAscan-SE tRNA 2120 2196 . - . ID=rna-C9F07_27140;Parent=gene-C9F07_27140;anticodon=(pos:complement(2160..2162));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_27140;product=tRNA-Met PYKI01002721.1 tRNAscan-SE exon 2120 2196 . - . ID=exon-C9F07_27140-1;Parent=rna-C9F07_27140;anticodon=(pos:complement(2160..2162));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_27140;product=tRNA-Met PYKI01002721.1 Genbank pseudogene 2474 2839 . + . ID=gene-C9F07_27145;Name=C9F07_27145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27145;pseudo=true PYKI01002721.1 Protein Homology CDS 2474 2839 . + 0 ID=cds-C9F07_27145;Parent=gene-C9F07_27145;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457671.3;locus_tag=C9F07_27145;product=argininosuccinate synthase;pseudo=true;transl_table=11 ##sequence-region PYKI01001545.1 1 5953 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001545.1 Genbank region 1 5953 . + . ID=PYKI01001545.1:1..5953;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001545.1 Genbank gene 1 1327 . + . ID=gene-C9F07_14770;Name=C9F07_14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14770;partial=true;start_range=.,1 PYKI01001545.1 Protein Homology CDS 1 1327 . + 1 ID=cds-TGD74995.1;Parent=gene-C9F07_14770;Dbxref=NCBI_GP:TGD74995.1;Name=TGD74995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458592.1;locus_tag=C9F07_14770;partial=true;product=phosphoethanolamine transferase EptA;protein_id=TGD74995.1;start_range=.,1;transl_table=11 PYKI01001545.1 Genbank gene 1324 1992 . + . ID=gene-C9F07_14775;Name=C9F07_14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14775 PYKI01001545.1 Protein Homology CDS 1324 1992 . + 0 ID=cds-TGD74990.1;Parent=gene-C9F07_14775;Dbxref=NCBI_GP:TGD74990.1;Name=TGD74990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458591.1;locus_tag=C9F07_14775;product=two-component system response regulator BasR;protein_id=TGD74990.1;transl_table=11 PYKI01001545.1 Genbank gene 2002 3072 . + . ID=gene-C9F07_14780;Name=C9F07_14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14780 PYKI01001545.1 Protein Homology CDS 2002 3072 . + 0 ID=cds-TGD74996.1;Parent=gene-C9F07_14780;Dbxref=NCBI_GP:TGD74996.1;Name=TGD74996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=C9F07_14780;product=two-component system sensor histidine kinase BasS;protein_id=TGD74996.1;transl_table=11 PYKI01001545.1 Genbank gene 3080 3169 . - . ID=gene-C9F07_14785;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=C9F07_14785 PYKI01001545.1 Protein Homology CDS 3080 3169 . - 0 ID=cds-TGD74991.1;Parent=gene-C9F07_14785;Dbxref=NCBI_GP:TGD74991.1;Name=TGD74991.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=C9F07_14785;product=LpxT activity modulator PmrR;protein_id=TGD74991.1;transl_table=11 PYKI01001545.1 Genbank gene 3239 4741 . - . ID=gene-C9F07_14790;Name=C9F07_14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14790 PYKI01001545.1 Protein Homology CDS 3239 4741 . - 0 ID=cds-TGD74992.1;Parent=gene-C9F07_14790;Dbxref=NCBI_GP:TGD74992.1;Name=TGD74992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=C9F07_14790;product=proline/glycine betaine transporter ProP;protein_id=TGD74992.1;transl_table=11 PYKI01001545.1 Genbank gene 5209 5544 . + . ID=gene-C9F07_14795;Name=C9F07_14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14795 PYKI01001545.1 Protein Homology CDS 5209 5544 . + 0 ID=cds-TGD74993.1;Parent=gene-C9F07_14795;Dbxref=NCBI_GP:TGD74993.1;Name=TGD74993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458588.1;locus_tag=C9F07_14795;product=hypothetical protein;protein_id=TGD74993.1;transl_table=11 PYKI01001545.1 Genbank gene 5664 5953 . + . ID=gene-C9F07_14800;Name=C9F07_14800;end_range=5953,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14800;partial=true PYKI01001545.1 Protein Homology CDS 5664 5953 . + 0 ID=cds-TGD74994.1;Parent=gene-C9F07_14800;Dbxref=NCBI_GP:TGD74994.1;Name=TGD74994.1;end_range=5953,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458587.1;locus_tag=C9F07_14800;partial=true;product=VOC family protein;protein_id=TGD74994.1;transl_table=11 ##sequence-region PYKI01000185.1 1 315 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000185.1 Genbank region 1 315 . + . ID=PYKI01000185.1:1..315;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000185.1 Genbank gene 1 197 . - . ID=gene-C9F07_01250;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=C9F07_01250;partial=true;start_range=.,1 PYKI01000185.1 Protein Homology CDS 1 197 . - 0 ID=cds-TGE30041.1;Parent=gene-C9F07_01250;Dbxref=NCBI_GP:TGE30041.1;Name=TGE30041.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311667.1;locus_tag=C9F07_01250;partial=true;product=CTP synthetase;protein_id=TGE30041.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001681.1 1 314 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001681.1 Genbank region 1 314 . + . ID=PYKI01001681.1:1..314;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001681.1 Genbank pseudogene 28 314 . - . ID=gene-C9F07_16070;Name=C9F07_16070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16070;pseudo=true PYKI01001681.1 Protein Homology CDS 28 314 . - 2 ID=cds-C9F07_16070;Parent=gene-C9F07_16070;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458428.1;locus_tag=C9F07_16070;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002194.1 1 314 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002194.1 Genbank region 1 314 . + . ID=PYKI01002194.1:1..314;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002194.1 Genbank pseudogene 49 314 . - . ID=gene-C9F07_21335;Name=C9F07_21335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21335;pseudo=true PYKI01002194.1 Protein Homology CDS 49 314 . - 2 ID=cds-C9F07_21335;Parent=gene-C9F07_21335;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458340.1;locus_tag=C9F07_21335;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01002018.1 1 312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002018.1 Genbank region 1 312 . + . ID=PYKI01002018.1:1..312;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002018.1 Genbank gene 1 269 . + . ID=gene-C9F07_19465;Name=C9F07_19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19465;partial=true;start_range=.,1 PYKI01002018.1 Protein Homology CDS 1 269 . + 2 ID=cds-TGD60081.1;Parent=gene-C9F07_19465;Dbxref=NCBI_GP:TGD60081.1;Name=TGD60081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=C9F07_19465;partial=true;product=hypothetical protein;protein_id=TGD60081.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001642.1 1 312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001642.1 Genbank region 1 312 . + . ID=PYKI01001642.1:1..312;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001642.1 Genbank gene 1 312 . - . ID=gene-C9F07_15690;Name=C9F07_15690;end_range=312,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15690;partial=true;start_range=.,1 PYKI01001642.1 Protein Homology CDS 1 312 . - 1 ID=cds-TGD70347.1;Parent=gene-C9F07_15690;Dbxref=NCBI_GP:TGD70347.1;Name=TGD70347.1;end_range=312,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001107324.1;locus_tag=C9F07_15690;partial=true;product=phage portal protein;protein_id=TGD70347.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000617.1 1 311 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000617.1 Genbank region 1 311 . + . ID=PYKI01000617.1:1..311;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000617.1 Genbank pseudogene 72 311 . - . ID=gene-C9F07_05310;Name=C9F07_05310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05310;pseudo=true PYKI01000617.1 Protein Homology CDS 72 311 . - 0 ID=cds-C9F07_05310;Parent=gene-C9F07_05310;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458112.1;locus_tag=C9F07_05310;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000056.1 1 311 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000056.1 Genbank region 1 311 . + . ID=PYKI01000056.1:1..311;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000056.1 Genbank gene 1 311 . - . ID=gene-C9F07_00340;Name=C9F07_00340;end_range=311,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00340;partial=true;start_range=.,1 PYKI01000056.1 Protein Homology CDS 1 311 . - 1 ID=cds-TGE30180.1;Parent=gene-C9F07_00340;Dbxref=NCBI_GP:TGE30180.1;Name=TGE30180.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;end_range=311,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456762.1;locus_tag=C9F07_00340;partial=true;product=PTS fructose transporter subunit EIIBC;protein_id=TGE30180.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000004.1 1 311 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000004.1 Genbank region 1 311 . + . ID=PYKI01000004.1:1..311;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000004.1 Genbank pseudogene 1 275 . - . ID=gene-C9F07_00025;Name=C9F07_00025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00025;pseudo=true PYKI01000004.1 Protein Homology CDS 1 275 . - 0 ID=cds-C9F07_00025;Parent=gene-C9F07_00025;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455954.1;locus_tag=C9F07_00025;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001539.1 1 311 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001539.1 Genbank region 1 311 . + . ID=PYKI01001539.1:1..311;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001539.1 Genbank gene 1 311 . - . ID=gene-C9F07_14720;Name=ligA;end_range=311,.;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=C9F07_14720;partial=true;start_range=.,1 PYKI01001539.1 Protein Homology CDS 1 311 . - 0 ID=cds-TGD75550.1;Parent=gene-C9F07_14720;Dbxref=NCBI_GP:TGD75550.1;Name=TGD75550.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;end_range=311,.;gbkey=CDS;gene=ligA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=C9F07_14720;partial=true;product=DNA ligase;protein_id=TGD75550.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002201.1 1 310 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002201.1 Genbank region 1 310 . + . ID=PYKI01002201.1:1..310;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002201.1 Genbank gene 1 310 . - . ID=gene-C9F07_21420;Name=ggt;end_range=310,.;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=C9F07_21420;partial=true;start_range=.,1 PYKI01002201.1 Protein Homology CDS 1 310 . - 1 ID=cds-TGD56533.1;Parent=gene-C9F07_21420;Dbxref=NCBI_GP:TGD56533.1;Name=TGD56533.1;Note=periplasmic enzyme%3B post-translationally processed into two subunits which are required for wild-type enzyme activity%3B cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptides;end_range=310,.;gbkey=CDS;gene=ggt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458368.1;locus_tag=C9F07_21420;partial=true;product=gamma-glutamyltransferase;protein_id=TGD56533.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002319.1 1 310 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002319.1 Genbank region 1 310 . + . ID=PYKI01002319.1:1..310;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002319.1 Genbank pseudogene 118 276 . + . ID=gene-C9F07_22740;Name=C9F07_22740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22740;pseudo=true PYKI01002319.1 Protein Homology CDS 118 276 . + 0 ID=cds-C9F07_22740;Parent=gene-C9F07_22740;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455096.1;locus_tag=C9F07_22740;product=paraslipin;pseudo=true;transl_table=11 ##sequence-region PYKI01000130.1 1 310 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000130.1 Genbank region 1 310 . + . ID=PYKI01000130.1:1..310;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000130.1 Genbank gene 1 310 . + . ID=gene-C9F07_00890;Name=C9F07_00890;end_range=310,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00890;partial=true;start_range=.,1 PYKI01000130.1 Protein Homology CDS 1 310 . + 1 ID=cds-TGE30094.1;Parent=gene-C9F07_00890;Dbxref=NCBI_GP:TGE30094.1;Name=TGE30094.1;end_range=310,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458010.1;locus_tag=C9F07_00890;partial=true;product=hypothetical protein;protein_id=TGE30094.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001479.1 1 310 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001479.1 Genbank region 1 310 . + . ID=PYKI01001479.1:1..310;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001479.1 Genbank pseudogene 1 266 . + . ID=gene-C9F07_14060;Name=garD;gbkey=Gene;gene=garD;gene_biotype=pseudogene;locus_tag=C9F07_14060;pseudo=true PYKI01001479.1 Protein Homology CDS 1 266 . + 2 ID=cds-C9F07_14060;Parent=gene-C9F07_14060;Note=catalyzes the formation of 5-dehydro-4-deoxy-D-glucarate from D-galactarate%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=garD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312033.1;locus_tag=C9F07_14060;product=galactarate dehydratase;pseudo=true;transl_table=11 ##sequence-region PYKI01000433.1 1 310 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000433.1 Genbank region 1 310 . + . ID=PYKI01000433.1:1..310;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000433.1 Genbank gene 1 310 . - . ID=gene-C9F07_03335;Name=C9F07_03335;end_range=310,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03335;partial=true;start_range=.,1 PYKI01000433.1 Protein Homology CDS 1 310 . - 2 ID=cds-TGE20832.1;Parent=gene-C9F07_03335;Dbxref=NCBI_GP:TGE20832.1;Name=TGE20832.1;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;end_range=310,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455464.1;locus_tag=C9F07_03335;partial=true;product=phosphoserine transaminase;protein_id=TGE20832.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001938.1 1 309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001938.1 Genbank region 1 309 . + . ID=PYKI01001938.1:1..309;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001938.1 Genbank gene 1 69 . - . ID=gene-C9F07_18690;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F07_18690;partial=true;start_range=.,1 PYKI01001938.1 cmsearch rRNA 1 69 . - . ID=rna-C9F07_18690;Parent=gene-C9F07_18690;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00001,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_18690;partial=true;product=5S ribosomal RNA;start_range=.,1 PYKI01001938.1 cmsearch exon 1 69 . - . ID=exon-C9F07_18690-1;Parent=rna-C9F07_18690;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00001,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_18690;partial=true;product=5S ribosomal RNA;start_range=.,1 PYKI01001938.1 Genbank gene 251 309 . - . ID=gene-C9F07_18695;Name=C9F07_18695;end_range=309,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F07_18695;partial=true PYKI01001938.1 Genbank rRNA 251 309 . - . ID=rna-C9F07_18695;Parent=gene-C9F07_18695;end_range=309,.;gbkey=rRNA;locus_tag=C9F07_18695;partial=true;product=23S ribosomal RNA PYKI01001938.1 Genbank exon 251 309 . - . ID=exon-C9F07_18695-1;Parent=rna-C9F07_18695;end_range=309,.;gbkey=rRNA;locus_tag=C9F07_18695;partial=true;product=23S ribosomal RNA ##sequence-region PYKI01001145.1 1 309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001145.1 Genbank region 1 309 . + . ID=PYKI01001145.1:1..309;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001145.1 Genbank gene 1 309 . - . ID=gene-C9F07_10680;Name=C9F07_10680;end_range=309,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10680;partial=true;start_range=.,1 PYKI01001145.1 Protein Homology CDS 1 309 . - 0 ID=cds-TGD94083.1;Parent=gene-C9F07_10680;Dbxref=NCBI_GP:TGD94083.1;Name=TGD94083.1;end_range=309,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456447.1;locus_tag=C9F07_10680;partial=true;product=oligopeptidase B;protein_id=TGD94083.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001272.1 1 309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001272.1 Genbank region 1 309 . + . ID=PYKI01001272.1:1..309;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001272.1 Genbank pseudogene 23 309 . - . ID=gene-C9F07_11900;Name=C9F07_11900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11900;pseudo=true PYKI01001272.1 Protein Homology CDS 23 309 . - 2 ID=cds-C9F07_11900;Parent=gene-C9F07_11900;Note=high-affinity transporter for xanthine%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312557.1;locus_tag=C9F07_11900;product=xanthine permease XanP;pseudo=true;transl_table=11 ##sequence-region PYKI01001685.1 1 309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001685.1 Genbank region 1 309 . + . ID=PYKI01001685.1:1..309;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001685.1 Genbank pseudogene 1 309 . + . ID=gene-C9F07_16095;Name=C9F07_16095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16095;pseudo=true PYKI01001685.1 Protein Homology CDS 1 309 . + 1 ID=cds-C9F07_16095;Parent=gene-C9F07_16095;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455284.1;locus_tag=C9F07_16095;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000695.1 1 309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000695.1 Genbank region 1 309 . + . ID=PYKI01000695.1:1..309;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000695.1 Genbank gene 1 309 . - . ID=gene-C9F07_06095;Name=lplA;end_range=309,.;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=C9F07_06095;partial=true;start_range=.,1 PYKI01000695.1 Protein Homology CDS 1 309 . - 2 ID=cds-TGE11324.1;Parent=gene-C9F07_06095;Dbxref=NCBI_GP:TGE11324.1;Name=TGE11324.1;end_range=309,.;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458984.1;locus_tag=C9F07_06095;partial=true;product=lipoate-protein ligase LplA;protein_id=TGE11324.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001138.1 1 309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001138.1 Genbank region 1 309 . + . ID=PYKI01001138.1:1..309;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001138.1 Genbank pseudogene 65 304 . + . ID=gene-C9F07_10605;Name=C9F07_10605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10605;pseudo=true PYKI01001138.1 Protein Homology CDS 65 304 . + 0 ID=cds-C9F07_10605;Parent=gene-C9F07_10605;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000124310.1;locus_tag=C9F07_10605;product=ECF transporter S component;pseudo=true;transl_table=11 ##sequence-region PYKI01000467.1 1 308 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000467.1 Genbank region 1 308 . + . ID=PYKI01000467.1:1..308;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000467.1 Genbank pseudogene 24 308 . - . ID=gene-C9F07_03675;Name=C9F07_03675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03675;pseudo=true PYKI01000467.1 Protein Homology CDS 24 308 . - 0 ID=cds-C9F07_03675;Parent=gene-C9F07_03675;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454657.1;locus_tag=C9F07_03675;product=isoleucine--tRNA ligase;pseudo=true;transl_table=11 ##sequence-region PYKI01000222.1 1 308 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000222.1 Genbank region 1 308 . + . ID=PYKI01000222.1:1..308;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000222.1 Genbank gene 55 308 . + . ID=gene-C9F07_01455;Name=C9F07_01455;end_range=308,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01455;partial=true PYKI01000222.1 Protein Homology CDS 55 308 . + 0 ID=cds-TGE30012.1;Parent=gene-C9F07_01455;Dbxref=NCBI_GP:TGE30012.1;Name=TGE30012.1;end_range=308,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457206.1;locus_tag=C9F07_01455;partial=true;product=hypothetical protein;protein_id=TGE30012.1;transl_table=11 ##sequence-region PYKI01003227.1 1 308 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003227.1 Genbank region 1 308 . + . ID=PYKI01003227.1:1..308;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003227.1 Genbank gene 1 308 . - . ID=gene-C9F07_32500;Name=C9F07_32500;end_range=308,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32500;partial=true;start_range=.,1 PYKI01003227.1 Protein Homology CDS 1 308 . - 2 ID=cds-TGD36633.1;Parent=gene-C9F07_32500;Dbxref=NCBI_GP:TGD36633.1;Name=TGD36633.1;end_range=308,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=C9F07_32500;partial=true;product=hypothetical protein;protein_id=TGD36633.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000123.1 1 308 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000123.1 Genbank region 1 308 . + . ID=PYKI01000123.1:1..308;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000123.1 Genbank pseudogene 61 308 . + . ID=gene-C9F07_00830;Name=potG;gbkey=Gene;gene=potG;gene_biotype=pseudogene;locus_tag=C9F07_00830;pseudo=true PYKI01000123.1 Protein Homology CDS 61 308 . + 0 ID=cds-C9F07_00830;Parent=gene-C9F07_00830;Note=part of the PotFGHI ATP-dependent putrescine transporter%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=potG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=C9F07_00830;product=polyamine ABC transporter ATP-binding protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000690.1 1 307 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000690.1 Genbank region 1 307 . + . ID=PYKI01000690.1:1..307;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000690.1 Genbank pseudogene 52 307 . + . ID=gene-C9F07_06025;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=pseudogene;locus_tag=C9F07_06025;pseudo=true PYKI01000690.1 Protein Homology CDS 52 307 . + 0 ID=cds-C9F07_06025;Parent=gene-C9F07_06025;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=zntB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=C9F07_06025;product=zinc transporter ZntB;pseudo=true;transl_table=11 ##sequence-region PYKI01001466.1 1 307 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001466.1 Genbank region 1 307 . + . ID=PYKI01001466.1:1..307;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001466.1 Genbank pseudogene 1 307 . + . ID=gene-C9F07_13900;Name=helD;gbkey=Gene;gene=helD;gene_biotype=pseudogene;locus_tag=C9F07_13900;pseudo=true PYKI01001466.1 Protein Homology CDS 1 307 . + 1 ID=cds-C9F07_13900;Parent=gene-C9F07_13900;Note=catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;gene=helD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455573.1;locus_tag=C9F07_13900;product=DNA helicase IV;pseudo=true;transl_table=11 ##sequence-region PYKI01000313.1 1 307 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000313.1 Genbank region 1 307 . + . ID=PYKI01000313.1:1..307;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000313.1 Genbank gene 1 190 . - . ID=gene-C9F07_02135;Name=C9F07_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02135;partial=true;start_range=.,1 PYKI01000313.1 Protein Homology CDS 1 190 . - 0 ID=cds-TGE27771.1;Parent=gene-C9F07_02135;Dbxref=NCBI_GP:TGE27771.1;Name=TGE27771.1;Note=citryl-ACP lyase%3B catalyzes the formation of acetate and oxaloacetate from citrate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=C9F07_02135;partial=true;product=citrate lyase subunit beta;protein_id=TGE27771.1;start_range=.,1;transl_table=11 PYKI01000313.1 Genbank gene 187 307 . - . ID=gene-C9F07_02140;Name=C9F07_02140;end_range=307,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02140;partial=true PYKI01000313.1 Protein Homology CDS 187 307 . - 1 ID=cds-TGE27772.1;Parent=gene-C9F07_02140;Dbxref=NCBI_GP:TGE27772.1;Name=TGE27772.1;end_range=307,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455200.1;locus_tag=C9F07_02140;partial=true;product=citrate lyase acyl carrier protein 1;protein_id=TGE27772.1;transl_table=11 ##sequence-region PYKI01003269.1 1 2866 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003269.1 Genbank region 1 2866 . + . ID=PYKI01003269.1:1..2866;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003269.1 Genbank gene 1 852 . - . ID=gene-C9F07_32880;Name=C9F07_32880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32880;partial=true;start_range=.,1 PYKI01003269.1 Protein Homology CDS 1 852 . - 0 ID=cds-TGD36204.1;Parent=gene-C9F07_32880;Dbxref=NCBI_GP:TGD36204.1;Name=TGD36204.1;Note=YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=C9F07_32880;partial=true;product=cation:proton antiport protein;protein_id=TGD36204.1;start_range=.,1;transl_table=11 PYKI01003269.1 Genbank gene 1067 2287 . - . ID=gene-C9F07_32885;Name=C9F07_32885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32885 PYKI01003269.1 Protein Homology CDS 1067 2287 . - 0 ID=cds-TGD36205.1;Parent=gene-C9F07_32885;Dbxref=NCBI_GP:TGD36205.1;Name=TGD36205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=C9F07_32885;product=MFS transporter;protein_id=TGD36205.1;transl_table=11 PYKI01003269.1 Genbank gene 2460 2866 . + . ID=gene-C9F07_32890;Name=C9F07_32890;end_range=2866,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32890;partial=true PYKI01003269.1 Protein Homology CDS 2460 2866 . + 0 ID=cds-TGD36206.1;Parent=gene-C9F07_32890;Dbxref=NCBI_GP:TGD36206.1;Name=TGD36206.1;end_range=2866,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=C9F07_32890;partial=true;product=hypothetical protein;protein_id=TGD36206.1;transl_table=11 ##sequence-region PYKI01001778.1 1 306 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001778.1 Genbank region 1 306 . + . ID=PYKI01001778.1:1..306;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001778.1 Genbank gene 1 306 . - . ID=gene-C9F07_17070;Name=C9F07_17070;end_range=306,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17070;partial=true;start_range=.,1 PYKI01001778.1 Protein Homology CDS 1 306 . - 0 ID=cds-TGD66957.1;Parent=gene-C9F07_17070;Dbxref=NCBI_GP:TGD66957.1;Name=TGD66957.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;end_range=306,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313242.1;locus_tag=C9F07_17070;partial=true;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=TGD66957.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001113.1 1 306 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001113.1 Genbank region 1 306 . + . ID=PYKI01001113.1:1..306;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001113.1 Genbank gene 1 306 . + . ID=gene-C9F07_10375;Name=C9F07_10375;end_range=306,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10375;partial=true;start_range=.,1 PYKI01001113.1 Protein Homology CDS 1 306 . + 2 ID=cds-TGD95017.1;Parent=gene-C9F07_10375;Dbxref=NCBI_GP:TGD95017.1;Name=TGD95017.1;end_range=306,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454767.1;locus_tag=C9F07_10375;partial=true;product=hypothetical protein;protein_id=TGD95017.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002445.1 1 305 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002445.1 Genbank region 1 305 . + . ID=PYKI01002445.1:1..305;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002445.1 Genbank gene 50 305 . + . ID=gene-C9F07_24180;Name=C9F07_24180;end_range=305,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24180;partial=true PYKI01002445.1 Protein Homology CDS 50 305 . + 0 ID=cds-TGD50987.1;Parent=gene-C9F07_24180;Dbxref=NCBI_GP:TGD50987.1;Name=TGD50987.1;end_range=305,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001720572.1;locus_tag=C9F07_24180;partial=true;product=YbjN domain-containing protein;protein_id=TGD50987.1;transl_table=11 ##sequence-region PYKI01003516.1 1 305 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003516.1 Genbank region 1 305 . + . ID=PYKI01003516.1:1..305;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003516.1 Genbank gene 1 305 . - . ID=gene-C9F07_35470;Name=C9F07_35470;end_range=305,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35470;partial=true;start_range=.,1 PYKI01003516.1 Protein Homology CDS 1 305 . - 0 ID=cds-TGD31702.1;Parent=gene-C9F07_35470;Dbxref=NCBI_GP:TGD31702.1;Name=TGD31702.1;Note=with SufCD activates cysteine desulfurase SufS;end_range=305,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=C9F07_35470;partial=true;product=Fe-S cluster assembly protein SufB;protein_id=TGD31702.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003063.1 1 305 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003063.1 Genbank region 1 305 . + . ID=PYKI01003063.1:1..305;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003063.1 Genbank gene 1 305 . - . ID=gene-C9F07_30715;Name=C9F07_30715;end_range=305,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30715;partial=true;start_range=.,1 PYKI01003063.1 Protein Homology CDS 1 305 . - 0 ID=cds-TGD40956.1;Parent=gene-C9F07_30715;Dbxref=NCBI_GP:TGD40956.1;Name=TGD40956.1;Note=catalyzes the formation of pyruvate from D-cysteine;end_range=305,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=C9F07_30715;partial=true;product=D-cysteine desulfhydrase;protein_id=TGD40956.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000090.1 1 305 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000090.1 Genbank region 1 305 . + . ID=PYKI01000090.1:1..305;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000090.1 Genbank pseudogene 1 305 . + . ID=gene-C9F07_00585;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=pseudogene;locus_tag=C9F07_00585;pseudo=true PYKI01000090.1 Protein Homology CDS 1 305 . + 2 ID=cds-C9F07_00585;Parent=gene-C9F07_00585;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis%3B frameshifted%3B incomplete%3B missing start and stop;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458417.1;locus_tag=C9F07_00585;product=shikimate kinase I;pseudo=true;transl_table=11 ##sequence-region PYKI01001643.1 1 305 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001643.1 Genbank region 1 305 . + . ID=PYKI01001643.1:1..305;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001643.1 Genbank pseudogene 73 273 . + . ID=gene-C9F07_15695;Name=C9F07_15695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15695;pseudo=true PYKI01001643.1 Protein Homology CDS 73 273 . + 0 ID=cds-C9F07_15695;Parent=gene-C9F07_15695;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004233694.1;locus_tag=C9F07_15695;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002047.1 1 304 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002047.1 Genbank region 1 304 . + . ID=PYKI01002047.1:1..304;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002047.1 Genbank gene 1 304 . - . ID=gene-C9F07_19800;Name=C9F07_19800;end_range=304,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19800;partial=true;start_range=.,1 PYKI01002047.1 Protein Homology CDS 1 304 . - 0 ID=cds-TGD59973.1;Parent=gene-C9F07_19800;Dbxref=NCBI_GP:TGD59973.1;Name=TGD59973.1;end_range=304,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457095.1;locus_tag=C9F07_19800;partial=true;product=hypothetical protein;protein_id=TGD59973.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000429.1 1 303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000429.1 Genbank region 1 303 . + . ID=PYKI01000429.1:1..303;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000429.1 Genbank pseudogene 1 265 . - . ID=gene-C9F07_03315;Name=C9F07_03315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03315;pseudo=true PYKI01000429.1 Protein Homology CDS 1 265 . - 0 ID=cds-C9F07_03315;Parent=gene-C9F07_03315;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457789.1;locus_tag=C9F07_03315;product=sugar/pyridoxal phosphate phosphatase YigL;pseudo=true;transl_table=11 ##sequence-region PYKI01001583.1 1 303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001583.1 Genbank region 1 303 . + . ID=PYKI01001583.1:1..303;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001583.1 Genbank gene 1 303 . - . ID=gene-C9F07_15140;Name=C9F07_15140;end_range=303,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15140;partial=true;start_range=.,1 PYKI01001583.1 Protein Homology CDS 1 303 . - 0 ID=cds-TGD72403.1;Parent=gene-C9F07_15140;Dbxref=NCBI_GP:TGD72403.1;Name=TGD72403.1;Note=transcriptional activator of tricarboxylate transport system genes;end_range=303,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=C9F07_15140;partial=true;product=DNA-binding response regulator;protein_id=TGD72403.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000856.1 1 303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000856.1 Genbank region 1 303 . + . ID=PYKI01000856.1:1..303;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000856.1 Genbank gene 1 100 . + . ID=gene-C9F07_07840;Name=C9F07_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07840;partial=true;start_range=.,1 PYKI01000856.1 Protein Homology CDS 1 100 . + 1 ID=cds-TGE05872.1;Parent=gene-C9F07_07840;Dbxref=NCBI_GP:TGE05872.1;Name=TGE05872.1;Note=catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=C9F07_07840;partial=true;product=homoserine O-succinyltransferase;protein_id=TGE05872.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002765.1 1 303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002765.1 Genbank region 1 303 . + . ID=PYKI01002765.1:1..303;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002765.1 Genbank gene 1 303 . + . ID=gene-C9F07_27630;Name=C9F07_27630;end_range=303,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27630;partial=true;start_range=.,1 PYKI01002765.1 Protein Homology CDS 1 303 . + 0 ID=cds-TGD46529.1;Parent=gene-C9F07_27630;Dbxref=NCBI_GP:TGD46529.1;Name=TGD46529.1;end_range=303,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455103.1;locus_tag=C9F07_27630;partial=true;product=ABC transporter permease;protein_id=TGD46529.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000115.1 1 303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000115.1 Genbank region 1 303 . + . ID=PYKI01000115.1:1..303;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000115.1 Genbank gene 1 303 . + . ID=gene-C9F07_00790;Name=C9F07_00790;end_range=303,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00790;partial=true;start_range=.,1 PYKI01000115.1 Protein Homology CDS 1 303 . + 1 ID=cds-TGE30109.1;Parent=gene-C9F07_00790;Dbxref=NCBI_GP:TGE30109.1;Name=TGE30109.1;end_range=303,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456063.1;locus_tag=C9F07_00790;partial=true;product=hypothetical protein;protein_id=TGE30109.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001725.1 1 303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001725.1 Genbank region 1 303 . + . ID=PYKI01001725.1:1..303;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001725.1 Genbank gene 1 278 . + . ID=gene-C9F07_16485;Name=C9F07_16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16485;partial=true;start_range=.,1 PYKI01001725.1 Protein Homology CDS 1 278 . + 2 ID=cds-TGD68885.1;Parent=gene-C9F07_16485;Dbxref=NCBI_GP:TGD68885.1;Name=TGD68885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277881.1;locus_tag=C9F07_16485;partial=true;product=hypothetical protein;protein_id=TGD68885.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002091.1 1 302 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002091.1 Genbank region 1 302 . + . ID=PYKI01002091.1:1..302;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002091.1 Genbank gene 1 302 . + . ID=gene-C9F07_20295;Name=C9F07_20295;end_range=302,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20295;partial=true;start_range=.,1 PYKI01002091.1 Protein Homology CDS 1 302 . + 1 ID=cds-TGD58813.1;Parent=gene-C9F07_20295;Dbxref=NCBI_GP:TGD58813.1;Name=TGD58813.1;end_range=302,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454896.1;locus_tag=C9F07_20295;partial=true;product=type VI secretion system tip protein VgrG;protein_id=TGD58813.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001924.1 1 302 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001924.1 Genbank region 1 302 . + . ID=PYKI01001924.1:1..302;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001924.1 Genbank gene 1 302 . + . ID=gene-C9F07_18560;Name=C9F07_18560;end_range=302,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18560;partial=true;start_range=.,1 PYKI01001924.1 Protein Homology CDS 1 302 . + 0 ID=cds-TGD60953.1;Parent=gene-C9F07_18560;Dbxref=NCBI_GP:TGD60953.1;Name=TGD60953.1;Note=citryl-ACP lyase%3B catalyzes the formation of acetate and oxaloacetate from citrate;end_range=302,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455199.1;locus_tag=C9F07_18560;partial=true;product=citrate lyase subunit beta;protein_id=TGD60953.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002893.1 1 301 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002893.1 Genbank region 1 301 . + . ID=PYKI01002893.1:1..301;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002893.1 Genbank pseudogene 79 301 . - . ID=gene-C9F07_28970;Name=C9F07_28970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28970;pseudo=true PYKI01002893.1 Protein Homology CDS 79 301 . - 1 ID=cds-C9F07_28970;Parent=gene-C9F07_28970;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456485.1;locus_tag=C9F07_28970;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000097.1 1 301 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000097.1 Genbank region 1 301 . + . ID=PYKI01000097.1:1..301;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000097.1 Genbank gene 94 301 . + . ID=gene-C9F07_00625;Name=C9F07_00625;end_range=301,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00625;partial=true PYKI01000097.1 Protein Homology CDS 94 301 . + 0 ID=cds-TGE30138.1;Parent=gene-C9F07_00625;Dbxref=NCBI_GP:TGE30138.1;Name=TGE30138.1;end_range=301,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313263.1;locus_tag=C9F07_00625;partial=true;product=hypothetical protein;protein_id=TGE30138.1;transl_table=11 ##sequence-region PYKI01000548.1 1 301 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000548.1 Genbank region 1 301 . + . ID=PYKI01000548.1:1..301;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01003350.1 1 2863 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003350.1 Genbank region 1 2863 . + . ID=PYKI01003350.1:1..2863;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003350.1 Genbank pseudogene 67 825 . - . ID=gene-C9F07_33735;Name=C9F07_33735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33735;pseudo=true PYKI01003350.1 Protein Homology CDS 67 825 . - 0 ID=cds-C9F07_33735;Parent=gene-C9F07_33735;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001639862.1;locus_tag=C9F07_33735;product=DNA topoisomerase IV subunit A;pseudo=true;transl_table=11 PYKI01003350.1 Genbank gene 936 1802 . - . ID=gene-C9F07_33740;Name=C9F07_33740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33740 PYKI01003350.1 Protein Homology CDS 936 1802 . - 0 ID=cds-TGD35025.1;Parent=gene-C9F07_33740;Dbxref=NCBI_GP:TGD35025.1;Name=TGD35025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=C9F07_33740;product=AraC family transcriptional regulator;protein_id=TGD35025.1;transl_table=11 PYKI01003350.1 Genbank pseudogene 1874 2266 . - . ID=gene-C9F07_33745;Name=C9F07_33745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33745;pseudo=true PYKI01003350.1 Protein Homology CDS 1874 2266 . - 0 ID=cds-C9F07_33745;Parent=gene-C9F07_33745;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457569.1;locus_tag=C9F07_33745;product=TIGR00156 family protein;pseudo=true;transl_table=11 PYKI01003350.1 Genbank gene 2418 2863 . + . ID=gene-C9F07_33750;Name=C9F07_33750;end_range=2863,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33750;partial=true PYKI01003350.1 Protein Homology CDS 2418 2863 . + 0 ID=cds-TGD35026.1;Parent=gene-C9F07_33750;Dbxref=NCBI_GP:TGD35026.1;Name=TGD35026.1;Note=response regulator in two-component regulatory system with QseC%3B regulates FlhCD which is the master regulator for flagella and motility genes;end_range=2863,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457570.1;locus_tag=C9F07_33750;partial=true;product=two-component system response regulator QseB;protein_id=TGD35026.1;transl_table=11 ##sequence-region PYKI01002611.1 1 301 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002611.1 Genbank region 1 301 . + . ID=PYKI01002611.1:1..301;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002611.1 Genbank pseudogene 1 240 . + . ID=gene-C9F07_25970;Name=C9F07_25970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25970;pseudo=true PYKI01002611.1 Protein Homology CDS 1 240 . + 0 ID=cds-C9F07_25970;Parent=gene-C9F07_25970;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=C9F07_25970;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000101.1 1 301 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000101.1 Genbank region 1 301 . + . ID=PYKI01000101.1:1..301;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000101.1 Genbank pseudogene 70 301 . + . ID=gene-C9F07_00645;Name=C9F07_00645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00645;pseudo=true PYKI01000101.1 Protein Homology CDS 70 301 . + 0 ID=cds-C9F07_00645;Parent=gene-C9F07_00645;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454674.1;locus_tag=C9F07_00645;product=triphosphoribosyl-dephospho-CoA synthase;pseudo=true;transl_table=11 ##sequence-region PYKI01002754.1 1 301 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002754.1 Genbank region 1 301 . + . ID=PYKI01002754.1:1..301;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002754.1 Genbank pseudogene 1 253 . + . ID=gene-C9F07_27490;Name=C9F07_27490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27490;pseudo=true PYKI01002754.1 Protein Homology CDS 1 253 . + 1 ID=cds-C9F07_27490;Parent=gene-C9F07_27490;Note=Fep%3B Cbt%3B Cbr%3B FeuB%3B FepA%3B PfeA%3B IroN%3B BfeA%3B outer membrane receptor of ferric enterobactin and colicins B and D%3B interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461704.3;locus_tag=C9F07_27490;product=TonB-dependent siderophore receptor;pseudo=true;transl_table=11 ##sequence-region PYKI01000910.1 1 300 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000910.1 Genbank region 1 300 . + . ID=PYKI01000910.1:1..300;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000910.1 Genbank gene 1 300 . + . ID=gene-C9F07_08295;Name=nagA;end_range=300,.;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=C9F07_08295;partial=true;start_range=.,1 PYKI01000910.1 Protein Homology CDS 1 300 . + 0 ID=cds-TGE03102.1;Parent=gene-C9F07_08295;Dbxref=NCBI_GP:TGE03102.1;Name=TGE03102.1;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;end_range=300,.;gbkey=CDS;gene=nagA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455244.1;locus_tag=C9F07_08295;partial=true;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=TGE03102.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003400.1 1 300 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003400.1 Genbank region 1 300 . + . ID=PYKI01003400.1:1..300;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003400.1 Genbank gene 1 300 . + . ID=gene-C9F07_34180;Name=C9F07_34180;end_range=300,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34180;partial=true;start_range=.,1 PYKI01003400.1 Protein Homology CDS 1 300 . + 1 ID=cds-TGD33927.1;Parent=gene-C9F07_34180;Dbxref=NCBI_GP:TGD33927.1;Name=TGD33927.1;end_range=300,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456217.1;locus_tag=C9F07_34180;partial=true;product=hypothetical protein;protein_id=TGD33927.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000428.1 1 300 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000428.1 Genbank region 1 300 . + . ID=PYKI01000428.1:1..300;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000428.1 Genbank gene 51 300 . + . ID=gene-C9F07_03310;Name=xerD;end_range=300,.;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=C9F07_03310;partial=true PYKI01000428.1 Protein Homology CDS 51 300 . + 0 ID=cds-TGE20834.1;Parent=gene-C9F07_03310;Dbxref=NCBI_GP:TGE20834.1;Name=TGE20834.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;end_range=300,.;gbkey=CDS;gene=xerD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457442.1;locus_tag=C9F07_03310;partial=true;product=site-specific tyrosine recombinase XerD;protein_id=TGE20834.1;transl_table=11 ##sequence-region PYKI01003128.1 1 299 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003128.1 Genbank region 1 299 . + . ID=PYKI01003128.1:1..299;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003128.1 Genbank gene 1 299 . + . ID=gene-C9F07_31320;Name=C9F07_31320;end_range=299,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31320;partial=true;start_range=.,1 PYKI01003128.1 Protein Homology CDS 1 299 . + 1 ID=cds-TGD39141.1;Parent=gene-C9F07_31320;Dbxref=NCBI_GP:TGD39141.1;Name=TGD39141.1;end_range=299,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458584.1;locus_tag=C9F07_31320;partial=true;product=formate dehydrogenase subunit alpha;protein_id=TGD39141.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001033.1 1 299 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001033.1 Genbank region 1 299 . + . ID=PYKI01001033.1:1..299;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001033.1 Genbank pseudogene 33 299 . - . ID=gene-C9F07_09530;Name=C9F07_09530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09530;pseudo=true PYKI01001033.1 Protein Homology CDS 33 299 . - 0 ID=cds-C9F07_09530;Parent=gene-C9F07_09530;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454775.1;locus_tag=C9F07_09530;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002183.1 1 298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002183.1 Genbank region 1 298 . + . ID=PYKI01002183.1:1..298;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002183.1 Genbank gene 1 298 . - . ID=gene-C9F07_21215;Name=treF;end_range=298,.;gbkey=Gene;gene=treF;gene_biotype=protein_coding;locus_tag=C9F07_21215;partial=true;start_range=.,1 PYKI01002183.1 Protein Homology CDS 1 298 . - 2 ID=cds-TGD56819.1;Parent=gene-C9F07_21215;Dbxref=NCBI_GP:TGD56819.1;Name=TGD56819.1;Note=cytoplasmic%3B catalyzes the hydrolysis of trehalose to glucose;end_range=298,.;gbkey=CDS;gene=treF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458316.1;locus_tag=C9F07_21215;partial=true;product=alpha%2Calpha-trehalase;protein_id=TGD56819.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000459.1 1 298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000459.1 Genbank region 1 298 . + . ID=PYKI01000459.1:1..298;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01001743.1 1 2855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001743.1 Genbank region 1 2855 . + . ID=PYKI01001743.1:1..2855;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001743.1 Genbank gene 1 197 . + . ID=gene-C9F07_16670;Name=C9F07_16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16670;partial=true;start_range=.,1 PYKI01001743.1 Protein Homology CDS 1 197 . + 2 ID=cds-TGD68472.1;Parent=gene-C9F07_16670;Dbxref=NCBI_GP:TGD68472.1;Name=TGD68472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456510.1;locus_tag=C9F07_16670;partial=true;product=hypothetical protein;protein_id=TGD68472.1;start_range=.,1;transl_table=11 PYKI01001743.1 Genbank gene 194 2026 . + . ID=gene-C9F07_16675;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=C9F07_16675 PYKI01001743.1 Protein Homology CDS 194 2026 . + 0 ID=cds-TGD68473.1;Parent=gene-C9F07_16675;Dbxref=NCBI_GP:TGD68473.1;Name=TGD68473.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=C9F07_16675;product=excinuclease ABC subunit C;protein_id=TGD68473.1;transl_table=11 PYKI01001743.1 Genbank gene 2083 2631 . + . ID=gene-C9F07_16680;Name=C9F07_16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16680 PYKI01001743.1 Protein Homology CDS 2083 2631 . + 0 ID=cds-TGD68474.1;Parent=gene-C9F07_16680;Dbxref=NCBI_GP:TGD68474.1;Name=TGD68474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456508.1;locus_tag=C9F07_16680;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=TGD68474.1;transl_table=11 PYKI01001743.1 Genbank gene 2783 2855 . + . ID=gene-C9F07_16685;Name=C9F07_16685;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_16685 PYKI01001743.1 tRNAscan-SE tRNA 2783 2855 . + . ID=rna-C9F07_16685;Parent=gene-C9F07_16685;anticodon=(pos:2816..2818);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_16685;product=tRNA-Gly PYKI01001743.1 tRNAscan-SE exon 2783 2855 . + . ID=exon-C9F07_16685-1;Parent=rna-C9F07_16685;anticodon=(pos:2816..2818);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_16685;product=tRNA-Gly ##sequence-region PYKI01000271.1 1 298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000271.1 Genbank region 1 298 . + . ID=PYKI01000271.1:1..298;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000271.1 Genbank gene 1 298 . + . ID=gene-C9F07_01755;Name=obgE;end_range=298,.;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=C9F07_01755;partial=true;start_range=.,1 PYKI01000271.1 Protein Homology CDS 1 298 . + 0 ID=cds-TGE27839.1;Parent=gene-C9F07_01755;Dbxref=NCBI_GP:TGE27839.1;Name=TGE27839.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;end_range=298,.;gbkey=CDS;gene=obgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457680.1;locus_tag=C9F07_01755;partial=true;product=GTPase ObgE;protein_id=TGE27839.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001777.1 1 298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001777.1 Genbank region 1 298 . + . ID=PYKI01001777.1:1..298;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001777.1 Genbank pseudogene 78 298 . - . ID=gene-C9F07_17065;Name=C9F07_17065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17065;pseudo=true PYKI01001777.1 Protein Homology CDS 78 298 . - 2 ID=cds-C9F07_17065;Parent=gene-C9F07_17065;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002901278.1;locus_tag=C9F07_17065;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01001053.1 1 297 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001053.1 Genbank region 1 297 . + . ID=PYKI01001053.1:1..297;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001053.1 Genbank pseudogene 9 297 . + . ID=gene-C9F07_09735;Name=C9F07_09735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09735;pseudo=true PYKI01001053.1 Protein Homology CDS 9 297 . + 0 ID=cds-C9F07_09735;Parent=gene-C9F07_09735;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458378.1;locus_tag=C9F07_09735;product=gluconate transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01003579.1 1 297 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003579.1 Genbank region 1 297 . + . ID=PYKI01003579.1:1..297;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003579.1 Genbank gene 1 297 . + . ID=gene-C9F07_36125;Name=C9F07_36125;end_range=297,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36125;partial=true;start_range=.,1 PYKI01003579.1 Protein Homology CDS 1 297 . + 1 ID=cds-TGD30078.1;Parent=gene-C9F07_36125;Dbxref=NCBI_GP:TGD30078.1;Name=TGD30078.1;Note=binds the polymerase to DNA and acts as a sliding clamp;end_range=297,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=C9F07_36125;partial=true;product=DNA polymerase III subunit beta;protein_id=TGD30078.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002094.1 1 297 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002094.1 Genbank region 1 297 . + . ID=PYKI01002094.1:1..297;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002094.1 Genbank gene 1 297 . + . ID=gene-C9F07_20310;Name=C9F07_20310;end_range=297,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20310;partial=true;start_range=.,1 PYKI01002094.1 Protein Homology CDS 1 297 . + 2 ID=cds-TGD58806.1;Parent=gene-C9F07_20310;Dbxref=NCBI_GP:TGD58806.1;Name=TGD58806.1;Note=catalyzes the hydrolysis of terminal beta-D-glucosyl residues;end_range=297,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456726.1;locus_tag=C9F07_20310;partial=true;product=beta-glucosidase;protein_id=TGD58806.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001908.1 1 296 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001908.1 Genbank region 1 296 . + . ID=PYKI01001908.1:1..296;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001908.1 Genbank gene 1 296 . - . ID=gene-C9F07_18380;Name=C9F07_18380;end_range=296,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18380;partial=true;start_range=.,1 PYKI01001908.1 Protein Homology CDS 1 296 . - 1 ID=cds-TGD61323.1;Parent=gene-C9F07_18380;Dbxref=NCBI_GP:TGD61323.1;Name=TGD61323.1;Note=c-di-GMP phosphodiesterase%3B probably degrades signalling molecule c-di-GMP;end_range=296,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455794.1;locus_tag=C9F07_18380;partial=true;product=cyclic di-GMP phosphodiesterase;protein_id=TGD61323.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002876.1 1 296 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002876.1 Genbank region 1 296 . + . ID=PYKI01002876.1:1..296;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002876.1 Genbank gene 1 296 . - . ID=gene-C9F07_28810;Name=C9F07_28810;end_range=296,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28810;partial=true;start_range=.,1 PYKI01002876.1 Protein Homology CDS 1 296 . - 2 ID=cds-TGD44485.1;Parent=gene-C9F07_28810;Dbxref=NCBI_GP:TGD44485.1;Name=TGD44485.1;end_range=296,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456293.1;locus_tag=C9F07_28810;partial=true;product=aminoacyl-tRNA hydrolase;protein_id=TGD44485.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002275.1 1 296 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002275.1 Genbank region 1 296 . + . ID=PYKI01002275.1:1..296;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002275.1 Genbank gene 1 296 . + . ID=gene-C9F07_22265;Name=C9F07_22265;end_range=296,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22265;partial=true;start_range=.,1 PYKI01002275.1 Protein Homology CDS 1 296 . + 2 ID=cds-TGD55036.1;Parent=gene-C9F07_22265;Dbxref=NCBI_GP:TGD55036.1;Name=TGD55036.1;end_range=296,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455008.1;locus_tag=C9F07_22265;partial=true;product=nucleoside-specific channel-forming protein Tsx;protein_id=TGD55036.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002007.1 1 2854 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002007.1 Genbank region 1 2854 . + . ID=PYKI01002007.1:1..2854;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002007.1 Genbank gene 1 835 . + . ID=gene-C9F07_19350;Name=C9F07_19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19350;partial=true;start_range=.,1 PYKI01002007.1 Protein Homology CDS 1 835 . + 1 ID=cds-TGD60124.1;Parent=gene-C9F07_19350;Dbxref=NCBI_GP:TGD60124.1;Name=TGD60124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=C9F07_19350;partial=true;product=membrane-bound lytic murein transglycosylase MltF;protein_id=TGD60124.1;start_range=.,1;transl_table=11 PYKI01002007.1 Genbank gene 886 1437 . - . ID=gene-C9F07_19355;Name=C9F07_19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19355 PYKI01002007.1 Protein Homology CDS 886 1437 . - 0 ID=cds-TGD60125.1;Parent=gene-C9F07_19355;Dbxref=NCBI_GP:TGD60125.1;Name=TGD60125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457097.1;locus_tag=C9F07_19355;product=tRNA adenosine(34) deaminase TadA;protein_id=TGD60125.1;transl_table=11 PYKI01002007.1 Genbank gene 1462 2097 . - . ID=gene-C9F07_19360;Name=C9F07_19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19360 PYKI01002007.1 Protein Homology CDS 1462 2097 . - 0 ID=cds-TGD60126.1;Parent=gene-C9F07_19360;Dbxref=NCBI_GP:TGD60126.1;Name=TGD60126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=C9F07_19360;product=phosphatidylglycerophosphatase C;protein_id=TGD60126.1;transl_table=11 PYKI01002007.1 Genbank gene 2167 2854 . - . ID=gene-C9F07_19365;Name=C9F07_19365;end_range=2854,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19365;partial=true PYKI01002007.1 Protein Homology CDS 2167 2854 . - 1 ID=cds-TGD60127.1;Parent=gene-C9F07_19365;Dbxref=NCBI_GP:TGD60127.1;Name=TGD60127.1;end_range=2854,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361650.1;locus_tag=C9F07_19365;partial=true;product=PTS sugar transporter subunit IIC;protein_id=TGD60127.1;transl_table=11 ##sequence-region PYKI01003546.1 1 296 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003546.1 Genbank region 1 296 . + . ID=PYKI01003546.1:1..296;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003546.1 Genbank gene 1 296 . - . ID=gene-C9F07_35785;Name=acpT;end_range=296,.;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=C9F07_35785;partial=true;start_range=.,1 PYKI01003546.1 Protein Homology CDS 1 296 . - 1 ID=cds-TGD30935.1;Parent=gene-C9F07_35785;Dbxref=NCBI_GP:TGD30935.1;Name=TGD30935.1;end_range=296,.;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458338.1;locus_tag=C9F07_35785;partial=true;product=4'-phosphopantetheinyl transferase AcpT;protein_id=TGD30935.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000211.1 1 296 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000211.1 Genbank region 1 296 . + . ID=PYKI01000211.1:1..296;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000211.1 Genbank gene 1 296 . - . ID=gene-C9F07_01400;Name=C9F07_01400;end_range=296,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01400;partial=true;start_range=.,1 PYKI01000211.1 Protein Homology CDS 1 296 . - 1 ID=cds-TGE30018.1;Parent=gene-C9F07_01400;Dbxref=NCBI_GP:TGE30018.1;Name=TGE30018.1;end_range=296,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455981.1;locus_tag=C9F07_01400;partial=true;product=hypothetical protein;protein_id=TGE30018.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003072.1 1 295 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003072.1 Genbank region 1 295 . + . ID=PYKI01003072.1:1..295;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003072.1 Genbank gene 1 295 . - . ID=gene-C9F07_30805;Name=pspF;end_range=295,.;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=C9F07_30805;partial=true;start_range=.,1 PYKI01003072.1 Protein Homology CDS 1 295 . - 2 ID=cds-TGD40445.1;Parent=gene-C9F07_30805;Dbxref=NCBI_GP:TGD40445.1;Name=TGD40445.1;Note=transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor;end_range=295,.;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455812.1;locus_tag=C9F07_30805;partial=true;product=phage shock protein operon transcriptional activator;protein_id=TGD40445.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001965.1 1 295 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001965.1 Genbank region 1 295 . + . ID=PYKI01001965.1:1..295;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001965.1 Genbank pseudogene 18 251 . - . ID=gene-C9F07_18960;Name=C9F07_18960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18960;pseudo=true PYKI01001965.1 Protein Homology CDS 18 251 . - 0 ID=cds-C9F07_18960;Parent=gene-C9F07_18960;Note=converts 1%2C4-alpha-D-glucans to maltodextrin%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=C9F07_18960;product=alpha-amylase;pseudo=true;transl_table=11 ##sequence-region PYKI01000619.1 1 295 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000619.1 Genbank region 1 295 . + . ID=PYKI01000619.1:1..295;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000619.1 Genbank gene 1 295 . - . ID=gene-C9F07_05320;Name=C9F07_05320;end_range=295,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05320;partial=true;start_range=.,1 PYKI01000619.1 Protein Homology CDS 1 295 . - 0 ID=cds-TGE13804.1;Parent=gene-C9F07_05320;Dbxref=NCBI_GP:TGE13804.1;Name=TGE13804.1;Note=catalyzes the formation of acetate from pyruvate;end_range=295,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455425.1;locus_tag=C9F07_05320;partial=true;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=TGE13804.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000151.1 1 294 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000151.1 Genbank region 1 294 . + . ID=PYKI01000151.1:1..294;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000151.1 Genbank gene 1 294 . - . ID=gene-C9F07_01010;Name=C9F07_01010;end_range=294,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01010;partial=true;start_range=.,1 PYKI01000151.1 Protein Homology CDS 1 294 . - 1 ID=cds-TGE30074.1;Parent=gene-C9F07_01010;Dbxref=NCBI_GP:TGE30074.1;Name=TGE30074.1;end_range=294,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=C9F07_01010;partial=true;product=DUF3418 domain-containing protein;protein_id=TGE30074.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003274.1 1 293 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003274.1 Genbank region 1 293 . + . ID=PYKI01003274.1:1..293;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003274.1 Genbank pseudogene 1 293 . + . ID=gene-C9F07_32935;Name=C9F07_32935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32935;pseudo=true PYKI01003274.1 Protein Homology CDS 1 293 . + 1 ID=cds-C9F07_32935;Parent=gene-C9F07_32935;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415931.4;locus_tag=C9F07_32935;product=ATP-dependent RNA helicase HrpA;pseudo=true;transl_table=11 ##sequence-region PYKI01000102.1 1 293 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000102.1 Genbank region 1 293 . + . ID=PYKI01000102.1:1..293;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000102.1 Genbank pseudogene 146 250 . - . ID=gene-C9F07_00650;Name=C9F07_00650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00650;pseudo=true PYKI01000102.1 Protein Homology CDS 146 250 . - 0 ID=cds-C9F07_00650;Parent=gene-C9F07_00650;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456611.1;locus_tag=C9F07_00650;product=thiosulfate reductase cytochrome B subunit;pseudo=true;transl_table=11 ##sequence-region PYKI01001532.1 1 2846 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001532.1 Genbank region 1 2846 . + . ID=PYKI01001532.1:1..2846;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001532.1 Genbank gene 1 484 . - . ID=gene-C9F07_14620;Name=C9F07_14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14620;partial=true;start_range=.,1 PYKI01001532.1 Protein Homology CDS 1 484 . - 0 ID=cds-TGD76285.1;Parent=gene-C9F07_14620;Dbxref=NCBI_GP:TGD76285.1;Name=TGD76285.1;Note=catalyzes the oxidation of formate to carbon dioxide and molecular hydrogen%3B formate hydrogenlyase comprises of a formate dehydrogenase%2C unidentified electron carriers and a hydrogenase (subunit 3);gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457245.1;locus_tag=C9F07_14620;partial=true;product=formate hydrogenlyase subunit 3;protein_id=TGD76285.1;start_range=.,1;transl_table=11 PYKI01001532.1 Genbank gene 484 1092 . - . ID=gene-C9F07_14625;Name=C9F07_14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14625 PYKI01001532.1 Protein Homology CDS 484 1092 . - 0 ID=cds-TGD76281.1;Parent=gene-C9F07_14625;Dbxref=NCBI_GP:TGD76281.1;Name=TGD76281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457246.1;locus_tag=C9F07_14625;product=4Fe-4S dicluster domain-containing protein;protein_id=TGD76281.1;transl_table=11 PYKI01001532.1 Genbank gene 1238 1699 . - . ID=gene-C9F07_14630;Name=C9F07_14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14630 PYKI01001532.1 Protein Homology CDS 1238 1699 . - 0 ID=cds-TGD76282.1;Parent=gene-C9F07_14630;Dbxref=NCBI_GP:TGD76282.1;Name=TGD76282.1;Note=regulates several genes involved in the formate hydrogenlyase system%3B seems to prevent binding of FhlA transcriptional activator to the activator sequence of hyc operon;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457247.1;locus_tag=C9F07_14630;product=transcriptional regulator;protein_id=TGD76282.1;transl_table=11 PYKI01001532.1 Genbank gene 1745 1948 . + . ID=gene-C9F07_14635;Name=C9F07_14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14635 PYKI01001532.1 Protein Homology CDS 1745 1948 . + 0 ID=cds-TGD76283.1;Parent=gene-C9F07_14635;Dbxref=NCBI_GP:TGD76283.1;Name=TGD76283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519037.1;locus_tag=C9F07_14635;product=hypothetical protein;protein_id=TGD76283.1;transl_table=11 PYKI01001532.1 Genbank gene 1909 2265 . + . ID=gene-C9F07_14640;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=C9F07_14640 PYKI01001532.1 Protein Homology CDS 1909 2265 . + 0 ID=cds-TGD76284.1;Parent=gene-C9F07_14640;Dbxref=NCBI_GP:TGD76284.1;Name=TGD76284.1;gbkey=CDS;gene=hypA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457248.1;locus_tag=C9F07_14640;product=protein HypA;protein_id=TGD76284.1;transl_table=11 PYKI01001532.1 Genbank pseudogene 2334 2783 . + . ID=gene-C9F07_14645;Name=C9F07_14645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14645;pseudo=true PYKI01001532.1 Protein Homology CDS 2334 2783 . + 0 ID=cds-C9F07_14645;Parent=gene-C9F07_14645;Note=GTP hydrolase involved in nickel liganding into hydrogenases%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=C9F07_14645;product=hydrogenase nickel incorporation protein HypB;pseudo=true;transl_table=11 ##sequence-region PYKI01001374.1 1 292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001374.1 Genbank region 1 292 . + . ID=PYKI01001374.1:1..292;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001374.1 Genbank gene 1 292 . + . ID=gene-C9F07_12925;Name=C9F07_12925;end_range=292,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12925;partial=true;start_range=.,1 PYKI01001374.1 Protein Homology CDS 1 292 . + 0 ID=cds-TGD84486.1;Parent=gene-C9F07_12925;Dbxref=NCBI_GP:TGD84486.1;Name=TGD84486.1;end_range=292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457725.1;locus_tag=C9F07_12925;partial=true;product=serine endoprotease DegQ;protein_id=TGD84486.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000216.1 1 292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000216.1 Genbank region 1 292 . + . ID=PYKI01000216.1:1..292;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000216.1 Genbank pseudogene 57 292 . - . ID=gene-C9F07_01425;Name=C9F07_01425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01425;pseudo=true PYKI01000216.1 Protein Homology CDS 57 292 . - 2 ID=cds-C9F07_01425;Parent=gene-C9F07_01425;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458317.1;locus_tag=C9F07_01425;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01003229.1 1 292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003229.1 Genbank region 1 292 . + . ID=PYKI01003229.1:1..292;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003229.1 Genbank pseudogene 60 292 . - . ID=gene-C9F07_32515;Name=C9F07_32515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32515;pseudo=true PYKI01003229.1 Protein Homology CDS 60 292 . - 2 ID=cds-C9F07_32515;Parent=gene-C9F07_32515;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=C9F07_32515;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000007.1 1 292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000007.1 Genbank region 1 292 . + . ID=PYKI01000007.1:1..292;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000007.1 Genbank gene 1 292 . + . ID=gene-C9F07_00040;Name=moaA;end_range=292,.;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=C9F07_00040;partial=true;start_range=.,1 PYKI01000007.1 Protein Homology CDS 1 292 . + 0 ID=cds-TGE30222.1;Parent=gene-C9F07_00040;Dbxref=NCBI_GP:TGE30222.1;Name=TGE30222.1;Note=together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z;end_range=292,.;gbkey=CDS;gene=moaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455343.1;locus_tag=C9F07_00040;partial=true;product=GTP 3'%2C8-cyclase MoaA;protein_id=TGE30222.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000182.1 1 292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000182.1 Genbank region 1 292 . + . ID=PYKI01000182.1:1..292;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000182.1 Genbank gene 1 292 . + . ID=gene-C9F07_01235;Name=C9F07_01235;end_range=292,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01235;partial=true;start_range=.,1 PYKI01000182.1 Protein Homology CDS 1 292 . + 2 ID=cds-TGE30044.1;Parent=gene-C9F07_01235;Dbxref=NCBI_GP:TGE30044.1;Name=TGE30044.1;end_range=292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=C9F07_01235;partial=true;product=hypothetical protein;protein_id=TGE30044.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002206.1 1 292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002206.1 Genbank region 1 292 . + . ID=PYKI01002206.1:1..292;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002206.1 Genbank gene 51 292 . + . ID=gene-C9F07_21470;Name=C9F07_21470;end_range=292,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21470;partial=true PYKI01002206.1 Protein Homology CDS 51 292 . + 0 ID=cds-TGD56514.1;Parent=gene-C9F07_21470;Dbxref=NCBI_GP:TGD56514.1;Name=TGD56514.1;end_range=292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458296.1;locus_tag=C9F07_21470;partial=true;product=cellulose biosynthesis protein BcsG;protein_id=TGD56514.1;transl_table=11 ##sequence-region PYKI01002375.1 1 291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002375.1 Genbank region 1 291 . + . ID=PYKI01002375.1:1..291;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002375.1 Genbank gene 1 291 . - . ID=gene-C9F07_23330;Name=oppD;end_range=291,.;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=C9F07_23330;partial=true;start_range=.,1 PYKI01002375.1 Protein Homology CDS 1 291 . - 1 ID=cds-TGD52581.1;Parent=gene-C9F07_23330;Dbxref=NCBI_GP:TGD52581.1;Name=TGD52581.1;end_range=291,.;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455755.1;locus_tag=C9F07_23330;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGD52581.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002235.1 1 291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002235.1 Genbank region 1 291 . + . ID=PYKI01002235.1:1..291;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002235.1 Genbank pseudogene 1 172 . + . ID=gene-C9F07_21810;Name=C9F07_21810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21810;pseudo=true PYKI01002235.1 Protein Homology CDS 1 172 . + 1 ID=cds-C9F07_21810;Parent=gene-C9F07_21810;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456546.1;locus_tag=C9F07_21810;product=mannosyl-3-phosphoglycerate phosphatase-related protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001237.1 1 291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001237.1 Genbank region 1 291 . + . ID=PYKI01001237.1:1..291;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001237.1 Genbank gene 1 212 . + . ID=gene-C9F07_11550;Name=C9F07_11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11550;partial=true;start_range=.,1 PYKI01001237.1 Protein Homology CDS 1 212 . + 2 ID=cds-TGD90933.1;Parent=gene-C9F07_11550;Dbxref=NCBI_GP:TGD90933.1;Name=TGD90933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457966.1;locus_tag=C9F07_11550;partial=true;product=glycerol kinase;protein_id=TGD90933.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000436.1 1 291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000436.1 Genbank region 1 291 . + . ID=PYKI01000436.1:1..291;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000436.1 Genbank gene 1 291 . - . ID=gene-C9F07_03355;Name=lamB;end_range=291,.;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=C9F07_03355;partial=true;start_range=.,1 PYKI01000436.1 Protein Homology CDS 1 291 . - 1 ID=cds-TGE20828.1;Parent=gene-C9F07_03355;Dbxref=NCBI_GP:TGE20828.1;Name=TGE20828.1;Note=porin involved in the transport of maltose and maltodextrins;end_range=291,.;gbkey=CDS;gene=lamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458529.1;locus_tag=C9F07_03355;partial=true;product=maltoporin;protein_id=TGE20828.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002315.1 1 2844 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002315.1 Genbank region 1 2844 . + . ID=PYKI01002315.1:1..2844;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002315.1 Genbank gene 1 2003 . - . ID=gene-C9F07_22700;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=C9F07_22700;partial=true;start_range=.,1 PYKI01002315.1 Protein Homology CDS 1 2003 . - 0 ID=cds-TGD54235.1;Parent=gene-C9F07_22700;Dbxref=NCBI_GP:TGD54235.1;Name=TGD54235.1;gbkey=CDS;gene=yccS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=C9F07_22700;partial=true;product=TIGR01666 family membrane protein;protein_id=TGD54235.1;start_range=.,1;transl_table=11 PYKI01002315.1 Genbank gene 2022 2468 . - . ID=gene-C9F07_22705;Name=C9F07_22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22705 PYKI01002315.1 Protein Homology CDS 2022 2468 . - 0 ID=cds-TGD54236.1;Parent=gene-C9F07_22705;Dbxref=NCBI_GP:TGD54236.1;Name=TGD54236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455572.1;locus_tag=C9F07_22705;product=YccF domain-containing protein;protein_id=TGD54236.1;transl_table=11 PYKI01002315.1 Genbank gene 2592 2844 . + . ID=gene-C9F07_22710;Name=helD;end_range=2844,.;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=C9F07_22710;partial=true PYKI01002315.1 Protein Homology CDS 2592 2844 . + 0 ID=cds-TGD54237.1;Parent=gene-C9F07_22710;Dbxref=NCBI_GP:TGD54237.1;Name=TGD54237.1;Note=catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand;end_range=2844,.;gbkey=CDS;gene=helD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=C9F07_22710;partial=true;product=DNA helicase IV;protein_id=TGD54237.1;transl_table=11 ##sequence-region PYKI01003541.1 1 291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003541.1 Genbank region 1 291 . + . ID=PYKI01003541.1:1..291;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003541.1 Genbank gene 1 291 . + . ID=gene-C9F07_35745;Name=C9F07_35745;end_range=291,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35745;partial=true;start_range=.,1 PYKI01003541.1 Protein Homology CDS 1 291 . + 1 ID=cds-TGD30957.1;Parent=gene-C9F07_35745;Dbxref=NCBI_GP:TGD30957.1;Name=TGD30957.1;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;end_range=291,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=C9F07_35745;partial=true;product=energy-dependent translational throttle protein EttA;protein_id=TGD30957.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000258.1 1 290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000258.1 Genbank region 1 290 . + . ID=PYKI01000258.1:1..290;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000258.1 Genbank gene 1 281 . - . ID=gene-C9F07_01680;Name=C9F07_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01680;partial=true;start_range=.,1 PYKI01000258.1 Protein Homology CDS 1 281 . - 0 ID=cds-TGE27853.1;Parent=gene-C9F07_01680;Dbxref=NCBI_GP:TGE27853.1;Name=TGE27853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454689.1;locus_tag=C9F07_01680;partial=true;product=MFS transporter;protein_id=TGE27853.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000231.1 1 290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000231.1 Genbank region 1 290 . + . ID=PYKI01000231.1:1..290;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000231.1 Genbank gene 1 142 . - . ID=gene-C9F07_01510;Name=C9F07_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01510;partial=true;start_range=.,1 PYKI01000231.1 Protein Homology CDS 1 142 . - 0 ID=cds-TGE27877.1;Parent=gene-C9F07_01510;Dbxref=NCBI_GP:TGE27877.1;Name=TGE27877.1;Note=catalyzes the formation of 2%2C4-dinitrophenyl-S-glutathione from 1-chloro-2%2C4-dinitrobenzene and glutathione;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001645380.1;locus_tag=C9F07_01510;partial=true;product=glutathione S-transferase;protein_id=TGE27877.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001980.1 1 290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001980.1 Genbank region 1 290 . + . ID=PYKI01001980.1:1..290;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001980.1 Genbank gene 1 261 . - . ID=gene-C9F07_19085;Name=C9F07_19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19085;partial=true;start_range=.,1 PYKI01001980.1 Protein Homology CDS 1 261 . - 0 ID=cds-TGD60252.1;Parent=gene-C9F07_19085;Dbxref=NCBI_GP:TGD60252.1;Name=TGD60252.1;Note=binds with fimbrial subunit LpfA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001714479.1;locus_tag=C9F07_19085;partial=true;product=long polar fimbrial chaperone LpfB;protein_id=TGD60252.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000169.1 1 290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000169.1 Genbank region 1 290 . + . ID=PYKI01000169.1:1..290;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000169.1 Genbank gene 1 290 . - . ID=gene-C9F07_01155;Name=hflB;end_range=290,.;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=C9F07_01155;partial=true;start_range=.,1 PYKI01000169.1 Protein Homology CDS 1 290 . - 1 ID=cds-TGE30058.1;Parent=gene-C9F07_01155;Dbxref=NCBI_GP:TGE30058.1;Name=TGE30058.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;end_range=290,.;gbkey=CDS;gene=hflB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312084.1;locus_tag=C9F07_01155;partial=true;product=ATP-dependent metalloprotease;protein_id=TGE30058.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002099.1 1 290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002099.1 Genbank region 1 290 . + . ID=PYKI01002099.1:1..290;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002099.1 Genbank gene 1 191 . - . ID=gene-C9F07_20380;Name=tbpA;gbkey=Gene;gene=tbpA;gene_biotype=protein_coding;locus_tag=C9F07_20380;partial=true;start_range=.,1 PYKI01002099.1 Protein Homology CDS 1 191 . - 0 ID=cds-TGD58788.1;Parent=gene-C9F07_20380;Dbxref=NCBI_GP:TGD58788.1;Name=TGD58788.1;Note=part of the thiamine and TPP transport system tbpA-thiPQ;gbkey=CDS;gene=tbpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124536.1;locus_tag=C9F07_20380;partial=true;product=thiamine ABC transporter substrate-binding protein;protein_id=TGD58788.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000564.1 1 289 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000564.1 Genbank region 1 289 . + . ID=PYKI01000564.1:1..289;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000564.1 Genbank gene 1 289 . + . ID=gene-C9F07_04760;Name=C9F07_04760;end_range=289,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04760;partial=true;start_range=.,1 PYKI01000564.1 Protein Homology CDS 1 289 . + 2 ID=cds-TGE14797.1;Parent=gene-C9F07_04760;Dbxref=NCBI_GP:TGE14797.1;Name=TGE14797.1;end_range=289,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=C9F07_04760;partial=true;product=indolepyruvate decarboxylase;protein_id=TGE14797.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000031.1 1 288 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000031.1 Genbank region 1 288 . + . ID=PYKI01000031.1:1..288;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000031.1 Genbank pseudogene 68 288 . - . ID=gene-C9F07_00180;Name=tppB;gbkey=Gene;gene=tppB;gene_biotype=pseudogene;gene_synonym=ydgR;locus_tag=C9F07_00180;pseudo=true PYKI01000031.1 Protein Homology CDS 68 288 . - 2 ID=cds-C9F07_00180;Parent=gene-C9F07_00180;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=tppB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456078.1;locus_tag=C9F07_00180;product=dipeptide/tripeptide permease;pseudo=true;transl_table=11 ##sequence-region PYKI01000575.1 1 288 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000575.1 Genbank region 1 288 . + . ID=PYKI01000575.1:1..288;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000575.1 Genbank gene 1 288 . - . ID=gene-C9F07_04855;Name=C9F07_04855;end_range=288,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04855;partial=true;start_range=.,1 PYKI01000575.1 Protein Homology CDS 1 288 . - 1 ID=cds-TGE14494.1;Parent=gene-C9F07_04855;Dbxref=NCBI_GP:TGE14494.1;Name=TGE14494.1;end_range=288,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457849.1;locus_tag=C9F07_04855;partial=true;product=integrase;protein_id=TGE14494.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002298.1 1 288 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002298.1 Genbank region 1 288 . + . ID=PYKI01002298.1:1..288;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002298.1 Genbank pseudogene 1 288 . + . ID=gene-C9F07_22550;Name=C9F07_22550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22550;pseudo=true PYKI01002298.1 Protein Homology CDS 1 288 . + 2 ID=cds-C9F07_22550;Parent=gene-C9F07_22550;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456868.1;locus_tag=C9F07_22550;product=NADH-quinone oxidoreductase subunit C/D;pseudo=true;transl_table=11 ##sequence-region PYKI01001202.1 1 2843 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001202.1 Genbank region 1 2843 . + . ID=PYKI01001202.1:1..2843;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001202.1 Genbank gene 245 808 . - . ID=gene-C9F07_11255;Name=C9F07_11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11255 PYKI01001202.1 Protein Homology CDS 245 808 . - 0 ID=cds-TGD91587.1;Parent=gene-C9F07_11255;Dbxref=NCBI_GP:TGD91587.1;Name=TGD91587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=C9F07_11255;product=acyloxyacyl hydrolase;protein_id=TGD91587.1;transl_table=11 PYKI01001202.1 Genbank pseudogene 799 996 . - . ID=gene-C9F07_11260;Name=C9F07_11260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11260;pseudo=true PYKI01001202.1 Protein Homology CDS 799 996 . - 0 ID=cds-C9F07_11260;Parent=gene-C9F07_11260;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530362.1;locus_tag=C9F07_11260;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001202.1 Genbank gene 1482 1628 . - . ID=gene-C9F07_11265;Name=C9F07_11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11265 PYKI01001202.1 Protein Homology CDS 1482 1628 . - 0 ID=cds-TGD91588.1;Parent=gene-C9F07_11265;Dbxref=NCBI_GP:TGD91588.1;Name=TGD91588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554888.1;locus_tag=C9F07_11265;product=transcriptional regulator;protein_id=TGD91588.1;transl_table=11 PYKI01001202.1 Genbank gene 1627 2274 . + . ID=gene-C9F07_11270;Name=C9F07_11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11270 PYKI01001202.1 Protein Homology CDS 1627 2274 . + 0 ID=cds-TGD91589.1;Parent=gene-C9F07_11270;Dbxref=NCBI_GP:TGD91589.1;Name=TGD91589.1;Note=nitrate/nitrite response regulator NarP%3B NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems%3B represses expression of other anaerobic genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456791.1;locus_tag=C9F07_11270;product=DNA-binding response regulator;protein_id=TGD91589.1;transl_table=11 PYKI01001202.1 Genbank gene 2318 2740 . - . ID=gene-C9F07_11275;Name=C9F07_11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11275 PYKI01001202.1 Protein Homology CDS 2318 2740 . - 0 ID=cds-TGD91590.1;Parent=gene-C9F07_11275;Dbxref=NCBI_GP:TGD91590.1;Name=TGD91590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739714.1;locus_tag=C9F07_11275;product=cytochrome C biogenesis protein;protein_id=TGD91590.1;transl_table=11 ##sequence-region PYKI01003162.1 1 5942 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003162.1 Genbank region 1 5942 . + . ID=PYKI01003162.1:1..5942;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003162.1 Genbank gene 44 157 . - . ID=gene-C9F07_31705;Name=C9F07_31705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31705 PYKI01003162.1 Protein Homology CDS 44 157 . - 0 ID=cds-TGD38152.1;Parent=gene-C9F07_31705;Dbxref=NCBI_GP:TGD38152.1;Name=TGD38152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=C9F07_31705;product=hypothetical protein;protein_id=TGD38152.1;transl_table=11 PYKI01003162.1 Genbank gene 154 1479 . - . ID=gene-C9F07_31710;Name=C9F07_31710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31710 PYKI01003162.1 Protein Homology CDS 154 1479 . - 0 ID=cds-TGD38149.1;Parent=gene-C9F07_31710;Dbxref=NCBI_GP:TGD38149.1;Name=TGD38149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=C9F07_31710;product=MATE family efflux transporter DinF;protein_id=TGD38149.1;transl_table=11 PYKI01003162.1 Genbank gene 1658 2266 . - . ID=gene-C9F07_31715;Name=C9F07_31715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31715 PYKI01003162.1 Protein Homology CDS 1658 2266 . - 0 ID=cds-TGD38150.1;Parent=gene-C9F07_31715;Dbxref=NCBI_GP:TGD38150.1;Name=TGD38150.1;Note=Represses a number of genes involved in the response to DNA damage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=C9F07_31715;product=LexA repressor;protein_id=TGD38150.1;transl_table=11 PYKI01003162.1 Genbank gene 2375 2743 . - . ID=gene-C9F07_31720;Name=C9F07_31720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31720 PYKI01003162.1 Protein Homology CDS 2375 2743 . - 0 ID=cds-TGD38151.1;Parent=gene-C9F07_31720;Dbxref=NCBI_GP:TGD38151.1;Name=TGD38151.1;Note=catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458534.1;locus_tag=C9F07_31720;product=diacylglycerol kinase;protein_id=TGD38151.1;transl_table=11 PYKI01003162.1 Genbank pseudogene 2914 5334 . + . ID=gene-C9F07_31725;Name=C9F07_31725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31725;pseudo=true PYKI01003162.1 Protein Homology CDS 2914 5334 . + 0 ID=cds-C9F07_31725;Parent=gene-C9F07_31725;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=C9F07_31725;product=glycerol-3-phosphate 1-O-acyltransferase;pseudo=true;transl_table=11 PYKI01003162.1 Genbank pseudogene 5433 5867 . - . ID=gene-C9F07_31730;Name=C9F07_31730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31730;pseudo=true PYKI01003162.1 Protein Homology CDS 5433 5867 . - 0 ID=cds-C9F07_31730;Parent=gene-C9F07_31730;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458532.1;locus_tag=C9F07_31730;product=4-hydroxybenzoate octaprenyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01000215.1 1 288 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000215.1 Genbank region 1 288 . + . ID=PYKI01000215.1:1..288;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000215.1 Genbank pseudogene 63 288 . + . ID=gene-C9F07_01420;Name=C9F07_01420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01420;pseudo=true PYKI01000215.1 Protein Homology CDS 63 288 . + 0 ID=cds-C9F07_01420;Parent=gene-C9F07_01420;Note=with HisPMQ is involved in the transport of histidine%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456897.1;locus_tag=C9F07_01420;product=histidine ABC transporter substrate-binding protein HisJ;pseudo=true;transl_table=11 ##sequence-region PYKI01000026.1 1 287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000026.1 Genbank region 1 287 . + . ID=PYKI01000026.1:1..287;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000026.1 Genbank gene 1 287 . - . ID=gene-C9F07_00155;Name=C9F07_00155;end_range=287,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00155;partial=true;start_range=.,1 PYKI01000026.1 GeneMarkS+ CDS 1 287 . - 0 ID=cds-TGE30206.1;Parent=gene-C9F07_00155;Dbxref=NCBI_GP:TGE30206.1;Name=TGE30206.1;end_range=287,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F07_00155;partial=true;product=hypothetical protein;protein_id=TGE30206.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000145.1 1 287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000145.1 Genbank region 1 287 . + . ID=PYKI01000145.1:1..287;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000145.1 Genbank gene 1 287 . + . ID=gene-C9F07_00980;Name=C9F07_00980;end_range=287,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00980;partial=true;start_range=.,1 PYKI01000145.1 Protein Homology CDS 1 287 . + 0 ID=cds-TGE30078.1;Parent=gene-C9F07_00980;Dbxref=NCBI_GP:TGE30078.1;Name=TGE30078.1;end_range=287,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456727.1;locus_tag=C9F07_00980;partial=true;product=D-lactate dehydrogenase;protein_id=TGE30078.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000824.1 1 287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000824.1 Genbank region 1 287 . + . ID=PYKI01000824.1:1..287;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000824.1 Genbank gene 1 287 . - . ID=gene-C9F07_07515;Name=C9F07_07515;end_range=287,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07515;partial=true;start_range=.,1 PYKI01000824.1 Protein Homology CDS 1 287 . - 1 ID=cds-TGE07356.1;Parent=gene-C9F07_07515;Dbxref=NCBI_GP:TGE07356.1;Name=TGE07356.1;end_range=287,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457555.1;locus_tag=C9F07_07515;partial=true;product=DedA family protein;protein_id=TGE07356.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001354.1 1 287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001354.1 Genbank region 1 287 . + . ID=PYKI01001354.1:1..287;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01001568.1 1 287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001568.1 Genbank region 1 287 . + . ID=PYKI01001568.1:1..287;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001568.1 Genbank gene 1 287 . + . ID=gene-C9F07_15015;Name=C9F07_15015;end_range=287,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15015;partial=true;start_range=.,1 PYKI01001568.1 Protein Homology CDS 1 287 . + 2 ID=cds-TGD73722.1;Parent=gene-C9F07_15015;Dbxref=NCBI_GP:TGD73722.1;Name=TGD73722.1;end_range=287,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455919.1;locus_tag=C9F07_15015;partial=true;product=nitrate reductase subunit alpha;protein_id=TGD73722.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001501.1 1 287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001501.1 Genbank region 1 287 . + . ID=PYKI01001501.1:1..287;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001501.1 Genbank gene 1 287 . + . ID=gene-C9F07_14290;Name=C9F07_14290;end_range=287,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14290;partial=true;start_range=.,1 PYKI01001501.1 Protein Homology CDS 1 287 . + 2 ID=cds-TGD78120.1;Parent=gene-C9F07_14290;Dbxref=NCBI_GP:TGD78120.1;Name=TGD78120.1;end_range=287,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458579.1;locus_tag=C9F07_14290;partial=true;product=heme lyase NrfEFG subunit NrfE;protein_id=TGD78120.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000047.1 1 286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000047.1 Genbank region 1 286 . + . ID=PYKI01000047.1:1..286;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000047.1 Genbank gene 1 286 . - . ID=gene-C9F07_00260;Name=garR;end_range=286,.;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=C9F07_00260;partial=true;start_range=.,1 PYKI01000047.1 Protein Homology CDS 1 286 . - 1 ID=cds-TGE30192.1;Parent=gene-C9F07_00260;Dbxref=NCBI_GP:TGE30192.1;Name=TGE30192.1;Note=catalyzes the reduction of tartronate semialdehyde to glycerate;end_range=286,.;gbkey=CDS;gene=garR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=C9F07_00260;partial=true;product=2-hydroxy-3-oxopropionate reductase;protein_id=TGE30192.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003068.1 1 286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003068.1 Genbank region 1 286 . + . ID=PYKI01003068.1:1..286;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01001376.1 1 2841 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001376.1 Genbank region 1 2841 . + . ID=PYKI01001376.1:1..2841;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001376.1 Genbank pseudogene 1 2454 . + . ID=gene-C9F07_12940;Name=C9F07_12940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12940;pseudo=true PYKI01001376.1 Protein Homology CDS 1 2454 . + 0 ID=cds-C9F07_12940;Parent=gene-C9F07_12940;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219113.1;locus_tag=C9F07_12940;product=ATP-dependent chaperone ClpB;pseudo=true;transl_table=11 PYKI01001376.1 Genbank gene 2650 2841 . - . ID=gene-C9F07_12945;Name=C9F07_12945;end_range=2841,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12945;partial=true PYKI01001376.1 Protein Homology CDS 2650 2841 . - 0 ID=cds-TGD84483.1;Parent=gene-C9F07_12945;Dbxref=NCBI_GP:TGD84483.1;Name=TGD84483.1;end_range=2841,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344137.1;locus_tag=C9F07_12945;partial=true;product=hypothetical protein;protein_id=TGD84483.1;transl_table=11 ##sequence-region PYKI01001023.1 1 286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001023.1 Genbank region 1 286 . + . ID=PYKI01001023.1:1..286;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001023.1 Genbank pseudogene 40 286 . - . ID=gene-C9F07_09425;Name=C9F07_09425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09425;pseudo=true PYKI01001023.1 Protein Homology CDS 40 286 . - 1 ID=cds-C9F07_09425;Parent=gene-C9F07_09425;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101092.1;locus_tag=C9F07_09425;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003381.1 1 286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003381.1 Genbank region 1 286 . + . ID=PYKI01003381.1:1..286;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003381.1 Genbank gene 1 286 . - . ID=gene-C9F07_34045;Name=C9F07_34045;end_range=286,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34045;partial=true;start_range=.,1 PYKI01003381.1 Protein Homology CDS 1 286 . - 2 ID=cds-TGD34420.1;Parent=gene-C9F07_34045;Dbxref=NCBI_GP:TGD34420.1;Name=TGD34420.1;Note=periplasmic substrate-binding component of the ATP-dependent ribose transport system;end_range=286,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458059.1;locus_tag=C9F07_34045;partial=true;product=D-ribose ABC transporter substrate-binding protein;protein_id=TGD34420.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000905.1 1 286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000905.1 Genbank region 1 286 . + . ID=PYKI01000905.1:1..286;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000905.1 Genbank gene 88 286 . - . ID=gene-C9F07_08265;Name=xni;end_range=286,.;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=C9F07_08265;partial=true PYKI01000905.1 Protein Homology CDS 88 286 . - 1 ID=cds-TGE03200.1;Parent=gene-C9F07_08265;Dbxref=NCBI_GP:TGE03200.1;Name=TGE03200.1;end_range=286,.;gbkey=CDS;gene=xni;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461892.3;locus_tag=C9F07_08265;partial=true;product=flap endonuclease Xni;protein_id=TGE03200.1;transl_table=11 ##sequence-region PYKI01001875.1 1 286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001875.1 Genbank region 1 286 . + . ID=PYKI01001875.1:1..286;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001875.1 Genbank gene 1 286 . - . ID=gene-C9F07_18065;Name=C9F07_18065;end_range=286,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18065;partial=true;start_range=.,1 PYKI01001875.1 Protein Homology CDS 1 286 . - 0 ID=cds-TGD62482.1;Parent=gene-C9F07_18065;Dbxref=NCBI_GP:TGD62482.1;Name=TGD62482.1;end_range=286,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457908.1;locus_tag=C9F07_18065;partial=true;product=NAD(+) diphosphatase;protein_id=TGD62482.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000240.1 1 286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000240.1 Genbank region 1 286 . + . ID=PYKI01000240.1:1..286;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000240.1 Genbank pseudogene 1 242 . + . ID=gene-C9F07_01570;Name=C9F07_01570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01570;pseudo=true PYKI01000240.1 Protein Homology CDS 1 242 . + 2 ID=cds-C9F07_01570;Parent=gene-C9F07_01570;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455658.1;locus_tag=C9F07_01570;product=glutaredoxin;pseudo=true;transl_table=11 ##sequence-region PYKI01000950.1 1 286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000950.1 Genbank region 1 286 . + . ID=PYKI01000950.1:1..286;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000950.1 Genbank gene 24 286 . - . ID=gene-C9F07_08690;Name=C9F07_08690;end_range=286,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08690;partial=true PYKI01000950.1 Protein Homology CDS 24 286 . - 2 ID=cds-TGE01548.1;Parent=gene-C9F07_08690;Dbxref=NCBI_GP:TGE01548.1;Name=TGE01548.1;end_range=286,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458836.1;locus_tag=C9F07_08690;partial=true;product=EamA family transporter;protein_id=TGE01548.1;transl_table=11 ##sequence-region PYKI01002197.1 1 285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002197.1 Genbank region 1 285 . + . ID=PYKI01002197.1:1..285;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002197.1 Genbank gene 1 285 . - . ID=gene-C9F07_21375;Name=C9F07_21375;end_range=285,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21375;partial=true;start_range=.,1 PYKI01002197.1 Protein Homology CDS 1 285 . - 0 ID=cds-TGD56554.1;Parent=gene-C9F07_21375;Dbxref=NCBI_GP:TGD56554.1;Name=TGD56554.1;end_range=285,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=C9F07_21375;partial=true;product=invasin;protein_id=TGD56554.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000798.1 1 285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000798.1 Genbank region 1 285 . + . ID=PYKI01000798.1:1..285;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000798.1 Genbank gene 36 285 . - . ID=gene-C9F07_07180;Name=C9F07_07180;end_range=285,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07180;partial=true PYKI01000798.1 Protein Homology CDS 36 285 . - 1 ID=cds-TGE09144.1;Parent=gene-C9F07_07180;Dbxref=NCBI_GP:TGE09144.1;Name=TGE09144.1;end_range=285,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001206792.1;locus_tag=C9F07_07180;partial=true;product=oligosaccharide repeat unit polymerase;protein_id=TGE09144.1;transl_table=11 ##sequence-region PYKI01000041.1 1 285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000041.1 Genbank region 1 285 . + . ID=PYKI01000041.1:1..285;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000041.1 Genbank gene 1 285 . - . ID=gene-C9F07_00230;Name=C9F07_00230;end_range=285,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00230;partial=true;start_range=.,1 PYKI01000041.1 Protein Homology CDS 1 285 . - 1 ID=cds-TGE30197.1;Parent=gene-C9F07_00230;Dbxref=NCBI_GP:TGE30197.1;Name=TGE30197.1;end_range=285,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=C9F07_00230;partial=true;product=two-component sensor histidine kinase;protein_id=TGE30197.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001076.1 1 285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001076.1 Genbank region 1 285 . + . ID=PYKI01001076.1:1..285;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001076.1 Genbank gene 1 285 . + . ID=gene-C9F07_09985;Name=C9F07_09985;end_range=285,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09985;partial=true;start_range=.,1 PYKI01001076.1 Protein Homology CDS 1 285 . + 1 ID=cds-TGD95828.1;Parent=gene-C9F07_09985;Dbxref=NCBI_GP:TGD95828.1;Name=TGD95828.1;end_range=285,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441950.1;locus_tag=C9F07_09985;partial=true;product=Holliday junction branch migration DNA helicase RuvB;protein_id=TGD95828.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002143.1 1 2837 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002143.1 Genbank region 1 2837 . + . ID=PYKI01002143.1:1..2837;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002143.1 Genbank gene 1 212 . - . ID=gene-C9F07_20775;Name=C9F07_20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20775;partial=true;start_range=.,1 PYKI01002143.1 Protein Homology CDS 1 212 . - 0 ID=cds-TGD57805.1;Parent=gene-C9F07_20775;Dbxref=NCBI_GP:TGD57805.1;Name=TGD57805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456442.1;locus_tag=C9F07_20775;partial=true;product=copper resistance protein CopD;protein_id=TGD57805.1;start_range=.,1;transl_table=11 PYKI01002143.1 Genbank gene 213 587 . - . ID=gene-C9F07_20780;Name=C9F07_20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20780 PYKI01002143.1 Protein Homology CDS 213 587 . - 0 ID=cds-TGD57806.1;Parent=gene-C9F07_20780;Dbxref=NCBI_GP:TGD57806.1;Name=TGD57806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=C9F07_20780;product=CopC domain-containing protein YobA;protein_id=TGD57806.1;transl_table=11 PYKI01002143.1 Genbank gene 725 955 . + . ID=gene-C9F07_20785;Name=C9F07_20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20785 PYKI01002143.1 Protein Homology CDS 725 955 . + 0 ID=cds-TGD57807.1;Parent=gene-C9F07_20785;Dbxref=NCBI_GP:TGD57807.1;Name=TGD57807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456444.1;locus_tag=C9F07_20785;product=DNA polymerase III subunit theta;protein_id=TGD57807.1;transl_table=11 PYKI01002143.1 Genbank gene 1063 1719 . + . ID=gene-C9F07_20790;Name=C9F07_20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20790 PYKI01002143.1 Protein Homology CDS 1063 1719 . + 0 ID=cds-TGD57808.1;Parent=gene-C9F07_20790;Dbxref=NCBI_GP:TGD57808.1;Name=TGD57808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=C9F07_20790;product=carbon-nitrogen hydrolase family protein;protein_id=TGD57808.1;transl_table=11 PYKI01002143.1 Genbank gene 1743 2441 . + . ID=gene-C9F07_20795;Name=C9F07_20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20795 PYKI01002143.1 Protein Homology CDS 1743 2441 . + 0 ID=cds-TGD57809.1;Parent=gene-C9F07_20795;Dbxref=NCBI_GP:TGD57809.1;Name=TGD57809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456446.1;locus_tag=C9F07_20795;product=exodeoxyribonuclease X;protein_id=TGD57809.1;transl_table=11 PYKI01002143.1 Genbank gene 2478 2837 . - . ID=gene-C9F07_20800;Name=C9F07_20800;end_range=2837,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20800;partial=true PYKI01002143.1 Protein Homology CDS 2478 2837 . - 0 ID=cds-TGD57810.1;Parent=gene-C9F07_20800;Dbxref=NCBI_GP:TGD57810.1;Name=TGD57810.1;Note=PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues;end_range=2837,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456447.1;locus_tag=C9F07_20800;partial=true;product=oligopeptidase B;protein_id=TGD57810.1;transl_table=11 ##sequence-region PYKI01002945.1 1 285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002945.1 Genbank region 1 285 . + . ID=PYKI01002945.1:1..285;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002945.1 Genbank gene 1 227 . + . ID=gene-C9F07_29515;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=C9F07_29515;partial=true;start_range=.,1 PYKI01002945.1 Protein Homology CDS 1 227 . + 2 ID=cds-TGD42318.1;Parent=gene-C9F07_29515;Dbxref=NCBI_GP:TGD42318.1;Name=TGD42318.1;Note=regulates the expression of citrate fermentation genes;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=C9F07_29515;partial=true;product=response regulator;protein_id=TGD42318.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000848.1 1 285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000848.1 Genbank region 1 285 . + . ID=PYKI01000848.1:1..285;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000848.1 Genbank pseudogene 1 285 . - . ID=gene-C9F07_07725;Name=C9F07_07725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07725;pseudo=true PYKI01000848.1 Protein Homology CDS 1 285 . - 1 ID=cds-C9F07_07725;Parent=gene-C9F07_07725;Note=catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455266.1;locus_tag=C9F07_07725;product=potassium-transporting ATPase subunit KdpA;pseudo=true;transl_table=11 ##sequence-region PYKI01000120.1 1 284 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000120.1 Genbank region 1 284 . + . ID=PYKI01000120.1:1..284;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000120.1 Genbank pseudogene 19 284 . - . ID=gene-C9F07_00815;Name=C9F07_00815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00815;pseudo=true PYKI01000120.1 Protein Homology CDS 19 284 . - 2 ID=cds-C9F07_00815;Parent=gene-C9F07_00815;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457220.1;locus_tag=C9F07_00815;product=alanine--tRNA ligase;pseudo=true;transl_table=11 ##sequence-region PYKI01000073.1 1 284 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000073.1 Genbank region 1 284 . + . ID=PYKI01000073.1:1..284;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000073.1 Genbank gene 1 284 . + . ID=gene-C9F07_00445;Name=C9F07_00445;end_range=284,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00445;partial=true;start_range=.,1 PYKI01000073.1 Protein Homology CDS 1 284 . + 2 ID=cds-TGE30166.1;Parent=gene-C9F07_00445;Dbxref=NCBI_GP:TGE30166.1;Name=TGE30166.1;end_range=284,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458145.1;locus_tag=C9F07_00445;partial=true;product=L-fucose:H+ symporter permease;protein_id=TGE30166.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002767.1 1 284 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002767.1 Genbank region 1 284 . + . ID=PYKI01002767.1:1..284;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002767.1 Genbank gene 82 284 . + . ID=gene-C9F07_27650;Name=C9F07_27650;end_range=284,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27650;partial=true PYKI01002767.1 Protein Homology CDS 82 284 . + 0 ID=cds-TGD46524.1;Parent=gene-C9F07_27650;Dbxref=NCBI_GP:TGD46524.1;Name=TGD46524.1;end_range=284,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455393.1;locus_tag=C9F07_27650;partial=true;product=multidrug transporter MdfA;protein_id=TGD46524.1;transl_table=11 ##sequence-region PYKI01000261.1 1 283 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000261.1 Genbank region 1 283 . + . ID=PYKI01000261.1:1..283;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000261.1 Genbank gene 1 283 . + . ID=gene-C9F07_01695;Name=C9F07_01695;end_range=283,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01695;partial=true;start_range=.,1 PYKI01000261.1 Protein Homology CDS 1 283 . + 0 ID=cds-TGE27850.1;Parent=gene-C9F07_01695;Dbxref=NCBI_GP:TGE27850.1;Name=TGE27850.1;end_range=283,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=C9F07_01695;partial=true;product=lytic transglycosylase F;protein_id=TGE27850.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000246.1 1 283 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000246.1 Genbank region 1 283 . + . ID=PYKI01000246.1:1..283;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000246.1 Genbank gene 78 283 . + . ID=gene-C9F07_01610;Name=C9F07_01610;end_range=283,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01610;partial=true PYKI01000246.1 Protein Homology CDS 78 283 . + 0 ID=cds-TGE27862.1;Parent=gene-C9F07_01610;Dbxref=NCBI_GP:TGE27862.1;Name=TGE27862.1;end_range=283,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157916.1;locus_tag=C9F07_01610;partial=true;product=DNA-binding transcriptional regulator CytR;protein_id=TGE27862.1;transl_table=11 ##sequence-region PYKI01003017.1 1 283 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003017.1 Genbank region 1 283 . + . ID=PYKI01003017.1:1..283;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003017.1 Genbank gene 1 283 . + . ID=gene-C9F07_30260;Name=C9F07_30260;end_range=283,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30260;partial=true;start_range=.,1 PYKI01003017.1 Protein Homology CDS 1 283 . + 0 ID=cds-TGD41151.1;Parent=gene-C9F07_30260;Dbxref=NCBI_GP:TGD41151.1;Name=TGD41151.1;end_range=283,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837149.1;locus_tag=C9F07_30260;partial=true;product=hypothetical protein;protein_id=TGD41151.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000672.1 1 283 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000672.1 Genbank region 1 283 . + . ID=PYKI01000672.1:1..283;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000672.1 Genbank gene 1 283 . + . ID=gene-C9F07_05855;Name=C9F07_05855;end_range=283,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05855;partial=true;start_range=.,1 PYKI01000672.1 Protein Homology CDS 1 283 . + 0 ID=cds-TGE11783.1;Parent=gene-C9F07_05855;Dbxref=NCBI_GP:TGE11783.1;Name=TGE11783.1;Note=transport system that facilitates potassium-efflux;end_range=283,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=C9F07_05855;partial=true;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=TGE11783.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000909.1 1 282 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000909.1 Genbank region 1 282 . + . ID=PYKI01000909.1:1..282;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000909.1 Genbank gene 25 282 . - . ID=gene-C9F07_08290;Name=C9F07_08290;end_range=282,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08290;partial=true PYKI01000909.1 Protein Homology CDS 25 282 . - 0 ID=cds-TGE03103.1;Parent=gene-C9F07_08290;Dbxref=NCBI_GP:TGE03103.1;Name=TGE03103.1;end_range=282,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458937.1;locus_tag=C9F07_08290;partial=true;product=beta-aspartyl-peptidase;protein_id=TGE03103.1;transl_table=11 ##sequence-region PYKI01000740.1 1 2827 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000740.1 Genbank region 1 2827 . + . ID=PYKI01000740.1:1..2827;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000740.1 Genbank pseudogene 144 1256 . + . ID=gene-C9F07_06505;Name=C9F07_06505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06505;pseudo=true PYKI01000740.1 Protein Homology CDS 144 1256 . + 0 ID=cds-C9F07_06505;Parent=gene-C9F07_06505;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001722632.1;locus_tag=C9F07_06505;product=acetylneuraminate ABC transporter;pseudo=true;transl_table=11 PYKI01000740.1 Genbank gene 1542 2423 . + . ID=gene-C9F07_06510;Name=C9F07_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06510 PYKI01000740.1 Protein Homology CDS 1542 2423 . + 0 ID=cds-TGE10826.1;Parent=gene-C9F07_06510;Dbxref=NCBI_GP:TGE10826.1;Name=TGE10826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460099.1;locus_tag=C9F07_06510;product=MurR/RpiR family transcriptional regulator;protein_id=TGE10826.1;transl_table=11 PYKI01000740.1 Genbank gene 2529 2827 . - . ID=gene-C9F07_06515;Name=C9F07_06515;end_range=2827,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06515;partial=true PYKI01000740.1 Protein Homology CDS 2529 2827 . - 2 ID=cds-TGE10827.1;Parent=gene-C9F07_06515;Dbxref=NCBI_GP:TGE10827.1;Name=TGE10827.1;end_range=2827,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455620.1;locus_tag=C9F07_06515;partial=true;product=phosphate starvation protein PhoH;protein_id=TGE10827.1;transl_table=11 ##sequence-region PYKI01002934.1 1 282 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002934.1 Genbank region 1 282 . + . ID=PYKI01002934.1:1..282;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002934.1 Genbank gene 1 282 . - . ID=gene-C9F07_29390;Name=C9F07_29390;end_range=282,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29390;partial=true;start_range=.,1 PYKI01002934.1 Protein Homology CDS 1 282 . - 2 ID=cds-TGD42808.1;Parent=gene-C9F07_29390;Dbxref=NCBI_GP:TGD42808.1;Name=TGD42808.1;Note=with malEFG is involved in import of maltose/maltodextrin;end_range=282,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=C9F07_29390;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGD42808.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000220.1 1 282 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000220.1 Genbank region 1 282 . + . ID=PYKI01000220.1:1..282;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000220.1 Genbank pseudogene 1 238 . - . ID=gene-C9F07_01445;Name=C9F07_01445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01445;pseudo=true PYKI01000220.1 Protein Homology CDS 1 238 . - 0 ID=cds-C9F07_01445;Parent=gene-C9F07_01445;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=C9F07_01445;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001046.1 1 282 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001046.1 Genbank region 1 282 . + . ID=PYKI01001046.1:1..282;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001046.1 Genbank gene 1 282 . + . ID=gene-C9F07_09660;Name=mnmC;end_range=282,.;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;gene_synonym=trmC,yfcK;locus_tag=C9F07_09660;partial=true;start_range=.,1 PYKI01001046.1 Protein Homology CDS 1 282 . + 2 ID=cds-TGD96546.1;Parent=gene-C9F07_09660;Dbxref=NCBI_GP:TGD96546.1;Name=TGD96546.1;Note=5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme;end_range=282,.;gbkey=CDS;gene=mnmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456921.3;locus_tag=C9F07_09660;partial=true;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=TGD96546.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001286.1 1 281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001286.1 Genbank region 1 281 . + . ID=PYKI01001286.1:1..281;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001286.1 Genbank pseudogene 61 281 . + . ID=gene-C9F07_12045;Name=C9F07_12045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12045;pseudo=true PYKI01001286.1 Protein Homology CDS 61 281 . + 0 ID=cds-C9F07_12045;Parent=gene-C9F07_12045;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=C9F07_12045;product=hydrogenase maturation nickel metallochaperone HypA;pseudo=true;transl_table=11 ##sequence-region PYKI01000422.1 1 281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000422.1 Genbank region 1 281 . + . ID=PYKI01000422.1:1..281;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000422.1 Genbank pseudogene 1 260 . + . ID=gene-C9F07_03255;Name=galM;gbkey=Gene;gene=galM;gene_biotype=pseudogene;locus_tag=C9F07_03255;pseudo=true PYKI01000422.1 Protein Homology CDS 1 260 . + 2 ID=cds-C9F07_03255;Parent=gene-C9F07_03255;Note=mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=galM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=C9F07_03255;product=galactose-1-epimerase;pseudo=true;transl_table=11 ##sequence-region PYKI01000147.1 1 281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000147.1 Genbank region 1 281 . + . ID=PYKI01000147.1:1..281;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000147.1 Genbank pseudogene 1 281 . - . ID=gene-C9F07_00990;Name=C9F07_00990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00990;pseudo=true PYKI01000147.1 Protein Homology CDS 1 281 . - 0 ID=cds-C9F07_00990;Parent=gene-C9F07_00990;Note=membrane protein conferring nickel and cobalt resistance%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=C9F07_00990;product=nickel/cobalt efflux protein RcnA;pseudo=true;transl_table=11 ##sequence-region PYKI01001318.1 1 281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001318.1 Genbank region 1 281 . + . ID=PYKI01001318.1:1..281;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001318.1 Genbank gene 1 281 . + . ID=gene-C9F07_12350;Name=C9F07_12350;end_range=281,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12350;partial=true;start_range=.,1 PYKI01001318.1 Protein Homology CDS 1 281 . + 0 ID=cds-TGD86194.1;Parent=gene-C9F07_12350;Dbxref=NCBI_GP:TGD86194.1;Name=TGD86194.1;end_range=281,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455739.1;locus_tag=C9F07_12350;partial=true;product=hypothetical protein;protein_id=TGD86194.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001634.1 1 281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001634.1 Genbank region 1 281 . + . ID=PYKI01001634.1:1..281;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001634.1 Genbank pseudogene 44 281 . - . ID=gene-C9F07_15615;Name=C9F07_15615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15615;pseudo=true PYKI01001634.1 Protein Homology CDS 44 281 . - 1 ID=cds-C9F07_15615;Parent=gene-C9F07_15615;Note=secreted by salmonella pathogenicity islands 1 and 2%3B involved in survival of Salmonella in host cells%3B interferes with host cell ubiquination pathway%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=C9F07_15615;product=E3 ubiquitin--protein ligase;pseudo=true;transl_table=11 ##sequence-region PYKI01002362.1 1 281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002362.1 Genbank region 1 281 . + . ID=PYKI01002362.1:1..281;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002362.1 Genbank gene 1 281 . + . ID=gene-C9F07_23220;Name=malE;end_range=281,.;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=C9F07_23220;partial=true;start_range=.,1 PYKI01002362.1 Protein Homology CDS 1 281 . + 2 ID=cds-TGD52954.1;Parent=gene-C9F07_23220;Dbxref=NCBI_GP:TGD52954.1;Name=TGD52954.1;Note=functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis;end_range=281,.;gbkey=CDS;gene=malE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458527.1;locus_tag=C9F07_23220;partial=true;product=maltose ABC transporter substrate-binding protein MalE;protein_id=TGD52954.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001149.1 1 280 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001149.1 Genbank region 1 280 . + . ID=PYKI01001149.1:1..280;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001149.1 Genbank gene 1 280 . - . ID=gene-C9F07_10720;Name=C9F07_10720;end_range=280,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10720;partial=true;start_range=.,1 PYKI01001149.1 Protein Homology CDS 1 280 . - 1 ID=cds-TGD93756.1;Parent=gene-C9F07_10720;Dbxref=NCBI_GP:TGD93756.1;Name=TGD93756.1;end_range=280,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456253.1;locus_tag=C9F07_10720;partial=true;product=peptide ABC transporter permease;protein_id=TGD93756.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003262.1 1 2823 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003262.1 Genbank region 1 2823 . + . ID=PYKI01003262.1:1..2823;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003262.1 Genbank gene 1 571 . - . ID=gene-C9F07_32795;Name=C9F07_32795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32795;partial=true;start_range=.,1 PYKI01003262.1 Protein Homology CDS 1 571 . - 0 ID=cds-TGD36249.1;Parent=gene-C9F07_32795;Dbxref=NCBI_GP:TGD36249.1;Name=TGD36249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458611.1;locus_tag=C9F07_32795;partial=true;product=AraC family transcriptional regulator;protein_id=TGD36249.1;start_range=.,1;transl_table=11 PYKI01003262.1 Genbank gene 835 1053 . - . ID=gene-C9F07_32800;Name=C9F07_32800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32800 PYKI01003262.1 Protein Homology CDS 835 1053 . - 0 ID=cds-TGD36250.1;Parent=gene-C9F07_32800;Dbxref=NCBI_GP:TGD36250.1;Name=TGD36250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989281.1;locus_tag=C9F07_32800;product=hypothetical protein;protein_id=TGD36250.1;transl_table=11 PYKI01003262.1 Genbank gene 1375 1668 . + . ID=gene-C9F07_32805;Name=C9F07_32805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32805 PYKI01003262.1 Protein Homology CDS 1375 1668 . + 0 ID=cds-TGD36251.1;Parent=gene-C9F07_32805;Dbxref=NCBI_GP:TGD36251.1;Name=TGD36251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=C9F07_32805;product=DUF1778 domain-containing protein;protein_id=TGD36251.1;transl_table=11 PYKI01003262.1 Genbank gene 1665 2156 . + . ID=gene-C9F07_32810;Name=C9F07_32810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32810 PYKI01003262.1 Protein Homology CDS 1665 2156 . + 0 ID=cds-TGD36252.1;Parent=gene-C9F07_32810;Dbxref=NCBI_GP:TGD36252.1;Name=TGD36252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458614.1;locus_tag=C9F07_32810;product=GNAT family N-acetyltransferase;protein_id=TGD36252.1;transl_table=11 PYKI01003262.1 Genbank pseudogene 2371 2619 . + . ID=gene-C9F07_32815;Name=C9F07_32815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32815;pseudo=true PYKI01003262.1 Protein Homology CDS 2371 2619 . + 0 ID=cds-C9F07_32815;Parent=gene-C9F07_32815;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=C9F07_32815;product=IS481 family transposase;pseudo=true;transl_table=11 ##sequence-region PYKI01001913.1 1 280 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001913.1 Genbank region 1 280 . + . ID=PYKI01001913.1:1..280;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001913.1 Genbank gene 121 280 . + . ID=gene-C9F07_18420;Name=C9F07_18420;end_range=280,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18420;partial=true PYKI01001913.1 Protein Homology CDS 121 280 . + 0 ID=cds-TGD61229.1;Parent=gene-C9F07_18420;Dbxref=NCBI_GP:TGD61229.1;Name=TGD61229.1;end_range=280,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001677061.1;locus_tag=C9F07_18420;partial=true;product=acyl dehydratase;protein_id=TGD61229.1;transl_table=11 ##sequence-region PYKI01000199.1 1 280 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000199.1 Genbank region 1 280 . + . ID=PYKI01000199.1:1..280;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000199.1 Genbank gene 1 280 . + . ID=gene-C9F07_01335;Name=C9F07_01335;end_range=280,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01335;partial=true;start_range=.,1 PYKI01000199.1 Protein Homology CDS 1 280 . + 1 ID=cds-TGE30027.1;Parent=gene-C9F07_01335;Dbxref=NCBI_GP:TGE30027.1;Name=TGE30027.1;Note=decatenates replicating daughter chromosomes;end_range=280,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456214.1;locus_tag=C9F07_01335;partial=true;product=DNA topoisomerase III;protein_id=TGE30027.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000392.1 1 279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000392.1 Genbank region 1 279 . + . ID=PYKI01000392.1:1..279;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000392.1 Genbank gene 1 279 . - . ID=gene-C9F07_02965;Name=C9F07_02965;end_range=279,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02965;partial=true;start_range=.,1 PYKI01000392.1 Protein Homology CDS 1 279 . - 1 ID=cds-TGE22779.1;Parent=gene-C9F07_02965;Dbxref=NCBI_GP:TGE22779.1;Name=TGE22779.1;Note=transport system that facilitates potassium-efflux;end_range=279,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454698.1;locus_tag=C9F07_02965;partial=true;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=TGE22779.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000106.1 1 279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000106.1 Genbank region 1 279 . + . ID=PYKI01000106.1:1..279;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000106.1 Genbank gene 1 256 . + . ID=gene-C9F07_00665;Name=C9F07_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00665;partial=true;start_range=.,1 PYKI01000106.1 Protein Homology CDS 1 256 . + 1 ID=cds-TGE30133.1;Parent=gene-C9F07_00665;Dbxref=NCBI_GP:TGE30133.1;Name=TGE30133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458197.1;locus_tag=C9F07_00665;partial=true;product=hypothetical protein;protein_id=TGE30133.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000738.1 1 279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000738.1 Genbank region 1 279 . + . ID=PYKI01000738.1:1..279;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000738.1 Genbank gene 1 279 . + . ID=gene-C9F07_06495;Name=C9F07_06495;end_range=279,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06495;partial=true;start_range=.,1 PYKI01000738.1 Protein Homology CDS 1 279 . + 0 ID=cds-TGE10831.1;Parent=gene-C9F07_06495;Dbxref=NCBI_GP:TGE10831.1;Name=TGE10831.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;end_range=279,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457567.1;locus_tag=C9F07_06495;partial=true;product=DNA topoisomerase IV subunit A;protein_id=TGE10831.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003011.1 1 279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003011.1 Genbank region 1 279 . + . ID=PYKI01003011.1:1..279;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003011.1 Genbank pseudogene 1 279 . - . ID=gene-C9F07_30190;Name=C9F07_30190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30190;pseudo=true PYKI01003011.1 Protein Homology CDS 1 279 . - 1 ID=cds-C9F07_30190;Parent=gene-C9F07_30190;Note=catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=C9F07_30190;product=tRNA 4-thiouridine(8) synthase ThiI;pseudo=true;transl_table=11 ##sequence-region PYKI01001853.1 1 279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001853.1 Genbank region 1 279 . + . ID=PYKI01001853.1:1..279;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001853.1 Genbank gene 1 279 . + . ID=gene-C9F07_17830;Name=C9F07_17830;end_range=279,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17830;partial=true;start_range=.,1 PYKI01001853.1 Protein Homology CDS 1 279 . + 2 ID=cds-TGD63411.1;Parent=gene-C9F07_17830;Dbxref=NCBI_GP:TGD63411.1;Name=TGD63411.1;end_range=279,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457158.1;locus_tag=C9F07_17830;partial=true;product=large repetitive protein;protein_id=TGD63411.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000952.1 1 279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000952.1 Genbank region 1 279 . + . ID=PYKI01000952.1:1..279;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000952.1 Genbank gene 1 279 . + . ID=gene-C9F07_08700;Name=ggt;end_range=279,.;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=C9F07_08700;partial=true;start_range=.,1 PYKI01000952.1 Protein Homology CDS 1 279 . + 1 ID=cds-TGE01487.1;Parent=gene-C9F07_08700;Dbxref=NCBI_GP:TGE01487.1;Name=TGE01487.1;Note=periplasmic enzyme%3B post-translationally processed into two subunits which are required for wild-type enzyme activity%3B cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptides;end_range=279,.;gbkey=CDS;gene=ggt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458368.1;locus_tag=C9F07_08700;partial=true;product=gamma-glutamyltransferase;protein_id=TGE01487.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001729.1 1 279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001729.1 Genbank region 1 279 . + . ID=PYKI01001729.1:1..279;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001729.1 Genbank gene 1 99 . + . ID=gene-C9F07_16510;Name=C9F07_16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16510;partial=true;start_range=.,1 PYKI01001729.1 Protein Homology CDS 1 99 . + 0 ID=cds-TGD68694.1;Parent=gene-C9F07_16510;Dbxref=NCBI_GP:TGD68694.1;Name=TGD68694.1;Note=hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455014.1;locus_tag=C9F07_16510;partial=true;product=phosphatidylglycerophosphatase A;protein_id=TGD68694.1;start_range=.,1;transl_table=11 PYKI01001729.1 Genbank gene 92 279 . - . ID=gene-C9F07_16515;Name=C9F07_16515;end_range=279,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16515;partial=true PYKI01001729.1 Protein Homology CDS 92 279 . - 2 ID=cds-TGD68695.1;Parent=gene-C9F07_16515;Dbxref=NCBI_GP:TGD68695.1;Name=TGD68695.1;end_range=279,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000930686.1;locus_tag=C9F07_16515;partial=true;product=hypothetical protein;protein_id=TGD68695.1;transl_table=11 ##sequence-region PYKI01002273.1 1 2822 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002273.1 Genbank region 1 2822 . + . ID=PYKI01002273.1:1..2822;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002273.1 Genbank gene 1 2822 . - . ID=gene-C9F07_22240;Name=icmF;end_range=2822,.;gbkey=Gene;gene=icmF;gene_biotype=protein_coding;locus_tag=C9F07_22240;partial=true;start_range=.,1 PYKI01002273.1 Protein Homology CDS 1 2822 . - 2 ID=cds-TGD55042.1;Parent=gene-C9F07_22240;Dbxref=NCBI_GP:TGD55042.1;Name=TGD55042.1;end_range=2822,.;gbkey=CDS;gene=icmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=C9F07_22240;partial=true;product=type VI secretion system membrane subunit TssM;protein_id=TGD55042.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003411.1 1 278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003411.1 Genbank region 1 278 . + . ID=PYKI01003411.1:1..278;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003411.1 Genbank gene 64 278 . - . ID=gene-C9F07_34295;Name=C9F07_34295;end_range=278,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34295;partial=true PYKI01003411.1 Protein Homology CDS 64 278 . - 2 ID=cds-TGD33848.1;Parent=gene-C9F07_34295;Dbxref=NCBI_GP:TGD33848.1;Name=TGD33848.1;end_range=278,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454821.1;locus_tag=C9F07_34295;partial=true;product=hypothetical protein;protein_id=TGD33848.1;transl_table=11 ##sequence-region PYKI01000674.1 1 278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000674.1 Genbank region 1 278 . + . ID=PYKI01000674.1:1..278;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000674.1 Genbank gene 1 278 . + . ID=gene-C9F07_05865;Name=C9F07_05865;end_range=278,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05865;partial=true;start_range=.,1 PYKI01000674.1 Protein Homology CDS 1 278 . + 1 ID=cds-TGE11679.1;Parent=gene-C9F07_05865;Dbxref=NCBI_GP:TGE11679.1;Name=TGE11679.1;end_range=278,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=C9F07_05865;partial=true;product=hypothetical protein;protein_id=TGE11679.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002702.1 1 278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002702.1 Genbank region 1 278 . + . ID=PYKI01002702.1:1..278;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002702.1 Genbank pseudogene 1 278 . - . ID=gene-C9F07_26960;Name=C9F07_26960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26960;pseudo=true PYKI01002702.1 Protein Homology CDS 1 278 . - 0 ID=cds-C9F07_26960;Parent=gene-C9F07_26960;Note=catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458267.1;locus_tag=C9F07_26960;product=xylulokinase;pseudo=true;transl_table=11 ##sequence-region PYKI01000443.1 1 277 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000443.1 Genbank region 1 277 . + . ID=PYKI01000443.1:1..277;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000443.1 Genbank gene 1 277 . - . ID=gene-C9F07_03425;Name=C9F07_03425;end_range=277,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03425;partial=true;start_range=.,1 PYKI01000443.1 Protein Homology CDS 1 277 . - 0 ID=cds-TGE20816.1;Parent=gene-C9F07_03425;Dbxref=NCBI_GP:TGE20816.1;Name=TGE20816.1;end_range=277,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458378.1;locus_tag=C9F07_03425;partial=true;product=gluconate transporter;protein_id=TGE20816.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000525.1 1 277 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000525.1 Genbank region 1 277 . + . ID=PYKI01000525.1:1..277;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000525.1 Genbank pseudogene 84 277 . + . ID=gene-C9F07_04355;Name=C9F07_04355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04355;pseudo=true PYKI01000525.1 Protein Homology CDS 84 277 . + 0 ID=cds-C9F07_04355;Parent=gene-C9F07_04355;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309756.1;locus_tag=C9F07_04355;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001688.1 1 277 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001688.1 Genbank region 1 277 . + . ID=PYKI01001688.1:1..277;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001688.1 Genbank pseudogene 89 277 . + . ID=gene-C9F07_16115;Name=C9F07_16115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16115;pseudo=true PYKI01001688.1 Protein Homology CDS 89 277 . + 0 ID=cds-C9F07_16115;Parent=gene-C9F07_16115;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457373.1;locus_tag=C9F07_16115;product=fucose isomerase;pseudo=true;transl_table=11 ##sequence-region PYKI01000567.1 1 276 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000567.1 Genbank region 1 276 . + . ID=PYKI01000567.1:1..276;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000567.1 Genbank gene 1 276 . - . ID=gene-C9F07_04800;Name=C9F07_04800;end_range=276,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04800;partial=true;start_range=.,1 PYKI01000567.1 Protein Homology CDS 1 276 . - 2 ID=cds-TGE14721.1;Parent=gene-C9F07_04800;Dbxref=NCBI_GP:TGE14721.1;Name=TGE14721.1;end_range=276,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=C9F07_04800;partial=true;product=hypothetical protein;protein_id=TGE14721.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002746.1 1 276 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002746.1 Genbank region 1 276 . + . ID=PYKI01002746.1:1..276;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01002530.1 1 276 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002530.1 Genbank region 1 276 . + . ID=PYKI01002530.1:1..276;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002530.1 Genbank gene 41 276 . + . ID=gene-C9F07_25110;Name=sopB;end_range=276,.;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;gene_synonym=ipgD,sigD;locus_tag=C9F07_25110;partial=true PYKI01002530.1 Protein Homology CDS 41 276 . + 0 ID=cds-TGD50040.1;Parent=gene-C9F07_25110;Dbxref=NCBI_GP:TGD50040.1;Name=TGD50040.1;Note=pathogenicity island 1 protein%3B catalyzes the formation of phosphatidylinositol-3 phosphate from phosphatidylinositol-3%2C4%2C5-triphosphate%3B involved in the formation and maintenance of Salmonella-containing vacuole in the host cell;end_range=276,.;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455588.1;locus_tag=C9F07_25110;partial=true;product=inositol phosphatase;protein_id=TGD50040.1;transl_table=11 ##sequence-region PYKI01000708.1 1 276 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000708.1 Genbank region 1 276 . + . ID=PYKI01000708.1:1..276;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000708.1 Genbank gene 1 276 . - . ID=gene-C9F07_06215;Name=C9F07_06215;end_range=276,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06215;partial=true;start_range=.,1 PYKI01000708.1 Protein Homology CDS 1 276 . - 2 ID=cds-TGE11305.1;Parent=gene-C9F07_06215;Dbxref=NCBI_GP:TGE11305.1;Name=TGE11305.1;end_range=276,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458350.1;locus_tag=C9F07_06215;partial=true;product=signal recognition particle-docking protein FtsY;protein_id=TGE11305.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000925.1 1 2817 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000925.1 Genbank region 1 2817 . + . ID=PYKI01000925.1:1..2817;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000925.1 Genbank gene 232 1845 . + . ID=gene-C9F07_08435;Name=C9F07_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08435 PYKI01000925.1 Protein Homology CDS 232 1845 . + 0 ID=cds-TGE02823.1;Parent=gene-C9F07_08435;Dbxref=NCBI_GP:TGE02823.1;Name=TGE02823.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=C9F07_08435;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=TGE02823.1;transl_table=11 PYKI01000925.1 Genbank gene 1942 2817 . - . ID=gene-C9F07_08440;Name=C9F07_08440;end_range=2817,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08440;partial=true PYKI01000925.1 Protein Homology CDS 1942 2817 . - 0 ID=cds-TGE02824.1;Parent=gene-C9F07_08440;Dbxref=NCBI_GP:TGE02824.1;Name=TGE02824.1;end_range=2817,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=C9F07_08440;partial=true;product=aromatic alcohol reductase;protein_id=TGE02824.1;transl_table=11 ##sequence-region PYKI01002130.1 1 276 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002130.1 Genbank region 1 276 . + . ID=PYKI01002130.1:1..276;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002130.1 Genbank gene 1 276 . + . ID=gene-C9F07_20610;Name=C9F07_20610;end_range=276,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20610;partial=true;start_range=.,1 PYKI01002130.1 Protein Homology CDS 1 276 . + 1 ID=cds-TGD57850.1;Parent=gene-C9F07_20610;Dbxref=NCBI_GP:TGD57850.1;Name=TGD57850.1;end_range=276,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456530.1;locus_tag=C9F07_20610;partial=true;product=flagellar M-ring protein FliF;protein_id=TGD57850.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002785.1 1 275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002785.1 Genbank region 1 275 . + . ID=PYKI01002785.1:1..275;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002785.1 Genbank gene 1 275 . - . ID=gene-C9F07_27835;Name=mtgA;end_range=275,.;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=C9F07_27835;partial=true;start_range=.,1 PYKI01002785.1 Protein Homology CDS 1 275 . - 2 ID=cds-TGD46176.1;Parent=gene-C9F07_27835;Dbxref=NCBI_GP:TGD46176.1;Name=TGD46176.1;Note=glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan;end_range=275,.;gbkey=CDS;gene=mtgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=C9F07_27835;partial=true;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=TGD46176.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001509.1 1 275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001509.1 Genbank region 1 275 . + . ID=PYKI01001509.1:1..275;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001509.1 Genbank gene 1 275 . - . ID=gene-C9F07_14395;Name=C9F07_14395;end_range=275,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14395;partial=true;start_range=.,1 PYKI01001509.1 Protein Homology CDS 1 275 . - 0 ID=cds-TGD77441.1;Parent=gene-C9F07_14395;Dbxref=NCBI_GP:TGD77441.1;Name=TGD77441.1;Note=with EutC catalyzes the formation of acetaldehyde and ammonia from ethanolamine;end_range=275,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311339.1;locus_tag=C9F07_14395;partial=true;product=ethanolamine ammonia lyase large subunit;protein_id=TGD77441.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001894.1 1 275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001894.1 Genbank region 1 275 . + . ID=PYKI01001894.1:1..275;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001894.1 Genbank gene 1 220 . + . ID=gene-C9F07_18270;Name=C9F07_18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18270;partial=true;start_range=.,1 PYKI01001894.1 Protein Homology CDS 1 220 . + 1 ID=cds-TGD61716.1;Parent=gene-C9F07_18270;Dbxref=NCBI_GP:TGD61716.1;Name=TGD61716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=C9F07_18270;partial=true;product=hypothetical protein;protein_id=TGD61716.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002471.1 1 275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002471.1 Genbank region 1 275 . + . ID=PYKI01002471.1:1..275;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01003174.1 1 275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003174.1 Genbank region 1 275 . + . ID=PYKI01003174.1:1..275;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003174.1 Genbank pseudogene 1 266 . - . ID=gene-C9F07_31850;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=pseudogene;locus_tag=C9F07_31850;pseudo=true PYKI01003174.1 Protein Homology CDS 1 266 . - 0 ID=cds-C9F07_31850;Parent=gene-C9F07_31850;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=cysJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=C9F07_31850;product=sulfite reductase subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKI01000135.1 1 275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000135.1 Genbank region 1 275 . + . ID=PYKI01000135.1:1..275;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01001428.1 1 274 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001428.1 Genbank region 1 274 . + . ID=PYKI01001428.1:1..274;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001428.1 Genbank gene 1 274 . + . ID=gene-C9F07_13530;Name=C9F07_13530;end_range=274,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13530;partial=true;start_range=.,1 PYKI01001428.1 Protein Homology CDS 1 274 . + 2 ID=cds-TGD83717.1;Parent=gene-C9F07_13530;Dbxref=NCBI_GP:TGD83717.1;Name=TGD83717.1;Note=Catalyzes the conversion of citrate to isocitrate;end_range=274,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=C9F07_13530;partial=true;product=aconitate hydratase;protein_id=TGD83717.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000263.1 1 274 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000263.1 Genbank region 1 274 . + . ID=PYKI01000263.1:1..274;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000263.1 Genbank gene 1 274 . - . ID=gene-C9F07_01720;Name=sdhA;end_range=274,.;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=C9F07_01720;partial=true;start_range=.,1 PYKI01000263.1 Protein Homology CDS 1 274 . - 2 ID=cds-TGE27845.1;Parent=gene-C9F07_01720;Dbxref=NCBI_GP:TGE27845.1;Name=TGE27845.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;end_range=274,.;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=C9F07_01720;partial=true;product=succinate dehydrogenase flavoprotein subunit;protein_id=TGE27845.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000072.1 1 274 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000072.1 Genbank region 1 274 . + . ID=PYKI01000072.1:1..274;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000072.1 Genbank gene 3 218 . + . ID=gene-C9F07_00440;Name=C9F07_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00440 PYKI01000072.1 Protein Homology CDS 3 218 . + 0 ID=cds-TGE30167.1;Parent=gene-C9F07_00440;Dbxref=NCBI_GP:TGE30167.1;Name=TGE30167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=C9F07_00440;product=hypothetical protein;protein_id=TGE30167.1;transl_table=11 ##sequence-region PYKI01001540.1 1 2817 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001540.1 Genbank region 1 2817 . + . ID=PYKI01001540.1:1..2817;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001540.1 Genbank pseudogene 61 741 . - . ID=gene-C9F07_14725;Name=C9F07_14725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14725;pseudo=true PYKI01001540.1 Protein Homology CDS 61 741 . - 0 ID=cds-C9F07_14725;Parent=gene-C9F07_14725;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456784.1;locus_tag=C9F07_14725;product=nucleoid-associated protein YejK;pseudo=true;transl_table=11 PYKI01001540.1 Genbank gene 921 1148 . + . ID=gene-C9F07_14730;Name=C9F07_14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14730 PYKI01001540.1 Protein Homology CDS 921 1148 . + 0 ID=cds-TGD75548.1;Parent=gene-C9F07_14730;Dbxref=NCBI_GP:TGD75548.1;Name=TGD75548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456785.1;locus_tag=C9F07_14730;product=hypothetical protein;protein_id=TGD75548.1;transl_table=11 PYKI01001540.1 Genbank gene 1180 2817 . + . ID=gene-C9F07_14735;Name=C9F07_14735;end_range=2817,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14735;partial=true PYKI01001540.1 Protein Homology CDS 1180 2817 . + 0 ID=cds-TGD75549.1;Parent=gene-C9F07_14735;Dbxref=NCBI_GP:TGD75549.1;Name=TGD75549.1;end_range=2817,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=C9F07_14735;partial=true;product=hypothetical protein;protein_id=TGD75549.1;transl_table=11 ##sequence-region PYKI01000107.1 1 273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000107.1 Genbank region 1 273 . + . ID=PYKI01000107.1:1..273;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000107.1 Genbank gene 1 273 . - . ID=gene-C9F07_00670;Name=C9F07_00670;end_range=273,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00670;partial=true;start_range=.,1 PYKI01000107.1 Protein Homology CDS 1 273 . - 0 ID=cds-TGE30132.1;Parent=gene-C9F07_00670;Dbxref=NCBI_GP:TGE30132.1;Name=TGE30132.1;end_range=273,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455663.1;locus_tag=C9F07_00670;partial=true;product=lipid II flippase MurJ;protein_id=TGE30132.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002281.1 1 273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002281.1 Genbank region 1 273 . + . ID=PYKI01002281.1:1..273;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002281.1 Genbank pseudogene 41 273 . - . ID=gene-C9F07_22340;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=pseudogene;locus_tag=C9F07_22340;pseudo=true PYKI01002281.1 Protein Homology CDS 41 273 . - 2 ID=cds-C9F07_22340;Parent=gene-C9F07_22340;Note=in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458054.1;locus_tag=C9F07_22340;product=molybdenum cofactor guanylyltransferase MobA;pseudo=true;transl_table=11 ##sequence-region PYKI01001176.1 1 273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001176.1 Genbank region 1 273 . + . ID=PYKI01001176.1:1..273;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001176.1 Genbank pseudogene 10 180 . + . ID=gene-C9F07_10985;Name=C9F07_10985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10985;pseudo=true PYKI01001176.1 Protein Homology CDS 10 180 . + 0 ID=cds-C9F07_10985;Parent=gene-C9F07_10985;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003837391.1;locus_tag=C9F07_10985;product=DUF4751 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000134.1 1 273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000134.1 Genbank region 1 273 . + . ID=PYKI01000134.1:1..273;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000134.1 Genbank gene 1 273 . - . ID=gene-C9F07_00910;Name=C9F07_00910;end_range=273,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00910;partial=true;start_range=.,1 PYKI01000134.1 Protein Homology CDS 1 273 . - 2 ID=cds-TGE30091.1;Parent=gene-C9F07_00910;Dbxref=NCBI_GP:TGE30091.1;Name=TGE30091.1;end_range=273,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=C9F07_00910;partial=true;product=hypothetical protein;protein_id=TGE30091.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000114.1 1 273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000114.1 Genbank region 1 273 . + . ID=PYKI01000114.1:1..273;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000114.1 Genbank gene 1 273 . - . ID=gene-C9F07_00785;Name=sbcB;end_range=273,.;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=C9F07_00785;partial=true;start_range=.,1 PYKI01000114.1 Protein Homology CDS 1 273 . - 0 ID=cds-TGE30110.1;Parent=gene-C9F07_00785;Dbxref=NCBI_GP:TGE30110.1;Name=TGE30110.1;Note=Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates;end_range=273,.;gbkey=CDS;gene=sbcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=C9F07_00785;partial=true;product=exodeoxyribonuclease I;protein_id=TGE30110.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000082.1 1 273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000082.1 Genbank region 1 273 . + . ID=PYKI01000082.1:1..273;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000082.1 Genbank pseudogene 1 273 . + . ID=gene-C9F07_00515;Name=C9F07_00515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00515;pseudo=true PYKI01000082.1 Protein Homology CDS 1 273 . + 1 ID=cds-C9F07_00515;Parent=gene-C9F07_00515;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=C9F07_00515;product=phosphogluconate dehydrogenase (NADP(+)-dependent%2C decarboxylating);pseudo=true;transl_table=11 ##sequence-region PYKI01000024.1 1 273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000024.1 Genbank region 1 273 . + . ID=PYKI01000024.1:1..273;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000024.1 Genbank gene 1 248 . - . ID=gene-C9F07_00145;Name=C9F07_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00145;partial=true;start_range=.,1 PYKI01000024.1 Protein Homology CDS 1 248 . - 0 ID=cds-TGE30207.1;Parent=gene-C9F07_00145;Dbxref=NCBI_GP:TGE30207.1;Name=TGE30207.1;Note=involved in drug resistance;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=C9F07_00145;partial=true;product=NADPH quinone reductase MdaB;protein_id=TGE30207.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001427.1 1 272 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001427.1 Genbank region 1 272 . + . ID=PYKI01001427.1:1..272;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001427.1 Genbank pseudogene 1 235 . - . ID=gene-C9F07_13525;Name=C9F07_13525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13525;pseudo=true PYKI01001427.1 Protein Homology CDS 1 235 . - 0 ID=cds-C9F07_13525;Parent=gene-C9F07_13525;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455562.1;locus_tag=C9F07_13525;product=paraquat-inducible protein B;pseudo=true;transl_table=11 ##sequence-region PYKI01002117.1 1 272 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002117.1 Genbank region 1 272 . + . ID=PYKI01002117.1:1..272;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002117.1 Genbank gene 1 272 . - . ID=gene-C9F07_20505;Name=C9F07_20505;end_range=272,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20505;partial=true;start_range=.,1 PYKI01002117.1 Protein Homology CDS 1 272 . - 0 ID=cds-TGD58329.1;Parent=gene-C9F07_20505;Dbxref=NCBI_GP:TGD58329.1;Name=TGD58329.1;end_range=272,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458296.1;locus_tag=C9F07_20505;partial=true;product=cellulose biosynthesis protein BcsG;protein_id=TGD58329.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000944.1 1 272 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000944.1 Genbank region 1 272 . + . ID=PYKI01000944.1:1..272;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000944.1 Genbank pseudogene 1 223 . + . ID=gene-C9F07_08605;Name=C9F07_08605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08605;pseudo=true PYKI01000944.1 Protein Homology CDS 1 223 . + 1 ID=cds-C9F07_08605;Parent=gene-C9F07_08605;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454759.1;locus_tag=C9F07_08605;product=nicotinate-nucleotide diphosphorylase;pseudo=true;transl_table=11 ##sequence-region PYKI01002218.1 1 2814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002218.1 Genbank region 1 2814 . + . ID=PYKI01002218.1:1..2814;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002218.1 Genbank gene 1 227 . + . ID=gene-C9F07_21625;Name=C9F07_21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21625;partial=true;start_range=.,1 PYKI01002218.1 Protein Homology CDS 1 227 . + 2 ID=cds-TGD56470.1;Parent=gene-C9F07_21625;Dbxref=NCBI_GP:TGD56470.1;Name=TGD56470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457901.1;locus_tag=C9F07_21625;partial=true;product=sensor protein ZraS;protein_id=TGD56470.1;start_range=.,1;transl_table=11 PYKI01002218.1 Genbank gene 233 1558 . + . ID=gene-C9F07_21630;Name=C9F07_21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21630 PYKI01002218.1 Protein Homology CDS 233 1558 . + 0 ID=cds-TGD56471.1;Parent=gene-C9F07_21630;Dbxref=NCBI_GP:TGD56471.1;Name=TGD56471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=C9F07_21630;product=two-component system response regulator ZraR;protein_id=TGD56471.1;transl_table=11 PYKI01002218.1 Genbank gene 1555 2814 . - . ID=gene-C9F07_21635;Name=C9F07_21635;end_range=2814,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21635;partial=true PYKI01002218.1 Protein Homology CDS 1555 2814 . - 0 ID=cds-TGD56472.1;Parent=gene-C9F07_21635;Dbxref=NCBI_GP:TGD56472.1;Name=TGD56472.1;end_range=2814,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457899.1;locus_tag=C9F07_21635;partial=true;product=phosphoribosylamine--glycine ligase;protein_id=TGD56472.1;transl_table=11 ##sequence-region PYKI01000006.1 1 272 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000006.1 Genbank region 1 272 . + . ID=PYKI01000006.1:1..272;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000006.1 Genbank pseudogene 15 257 . + . ID=gene-C9F07_00035;Name=C9F07_00035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00035;pseudo=true PYKI01000006.1 Protein Homology CDS 15 257 . + 0 ID=cds-C9F07_00035;Parent=gene-C9F07_00035;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000128176.1;locus_tag=C9F07_00035;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000529.1 1 272 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000529.1 Genbank region 1 272 . + . ID=PYKI01000529.1:1..272;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000529.1 Genbank pseudogene 1 272 . + . ID=gene-C9F07_04395;Name=C9F07_04395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04395;pseudo=true PYKI01000529.1 Protein Homology CDS 1 272 . + 0 ID=cds-C9F07_04395;Parent=gene-C9F07_04395;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=C9F07_04395;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001269.1 1 272 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001269.1 Genbank region 1 272 . + . ID=PYKI01001269.1:1..272;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001269.1 Genbank gene 1 272 . + . ID=gene-C9F07_11875;Name=C9F07_11875;end_range=272,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11875;partial=true;start_range=.,1 PYKI01001269.1 Protein Homology CDS 1 272 . + 2 ID=cds-TGD88734.1;Parent=gene-C9F07_11875;Dbxref=NCBI_GP:TGD88734.1;Name=TGD88734.1;end_range=272,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456468.1;locus_tag=C9F07_11875;partial=true;product=hypothetical protein;protein_id=TGD88734.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000675.1 1 272 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000675.1 Genbank region 1 272 . + . ID=PYKI01000675.1:1..272;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000675.1 Genbank gene 1 272 . + . ID=gene-C9F07_05870;Name=C9F07_05870;end_range=272,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05870;partial=true;start_range=.,1 PYKI01000675.1 Protein Homology CDS 1 272 . + 2 ID=cds-TGE11677.1;Parent=gene-C9F07_05870;Dbxref=NCBI_GP:TGE11677.1;Name=TGE11677.1;end_range=272,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457063.1;locus_tag=C9F07_05870;partial=true;product=hypothetical protein;protein_id=TGE11677.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002112.1 1 271 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002112.1 Genbank region 1 271 . + . ID=PYKI01002112.1:1..271;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002112.1 Genbank pseudogene 40 271 . - . ID=gene-C9F07_20480;Name=C9F07_20480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20480;pseudo=true PYKI01002112.1 Protein Homology CDS 40 271 . - 1 ID=cds-C9F07_20480;Parent=gene-C9F07_20480;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=C9F07_20480;product=valine--tRNA ligase;pseudo=true;transl_table=11 ##sequence-region PYKI01000036.1 1 270 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000036.1 Genbank region 1 270 . + . ID=PYKI01000036.1:1..270;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000036.1 Genbank pseudogene 73 270 . + . ID=gene-C9F07_00205;Name=C9F07_00205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00205;pseudo=true PYKI01000036.1 Protein Homology CDS 73 270 . + 0 ID=cds-C9F07_00205;Parent=gene-C9F07_00205;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456776.1;locus_tag=C9F07_00205;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003435.1 1 270 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003435.1 Genbank region 1 270 . + . ID=PYKI01003435.1:1..270;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003435.1 Genbank gene 1 270 . - . ID=gene-C9F07_34540;Name=pabB;end_range=270,.;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=C9F07_34540;partial=true;start_range=.,1 PYKI01003435.1 Protein Homology CDS 1 270 . - 1 ID=cds-TGD33490.1;Parent=gene-C9F07_34540;Dbxref=NCBI_GP:TGD33490.1;Name=TGD33490.1;Note=para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine;end_range=270,.;gbkey=CDS;gene=pabB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456331.1;locus_tag=C9F07_34540;partial=true;product=aminodeoxychorismate synthase component I;protein_id=TGD33490.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003035.1 1 239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003035.1 Genbank region 1 239 . + . ID=PYKI01003035.1:1..239;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003035.1 Genbank pseudogene 1 200 . + . ID=gene-C9F07_30460;Name=C9F07_30460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30460;pseudo=true PYKI01003035.1 Protein Homology CDS 1 200 . + 2 ID=cds-C9F07_30460;Parent=gene-C9F07_30460;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456590.1;locus_tag=C9F07_30460;product=propanediol dehydratase;pseudo=true;transl_table=11 ##sequence-region PYKI01000833.1 1 270 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000833.1 Genbank region 1 270 . + . ID=PYKI01000833.1:1..270;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000833.1 Genbank gene 68 270 . + . ID=gene-C9F07_07600;Name=C9F07_07600;end_range=270,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07600;partial=true PYKI01000833.1 Protein Homology CDS 68 270 . + 0 ID=cds-TGE07223.1;Parent=gene-C9F07_07600;Dbxref=NCBI_GP:TGE07223.1;Name=TGE07223.1;end_range=270,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001546785.1;locus_tag=C9F07_07600;partial=true;product=hypothetical protein;protein_id=TGE07223.1;transl_table=11 ##sequence-region PYKI01003207.1 1 2811 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003207.1 Genbank region 1 2811 . + . ID=PYKI01003207.1:1..2811;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003207.1 Genbank gene 272 934 . + . ID=gene-C9F07_32245;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=C9F07_32245 PYKI01003207.1 Protein Homology CDS 272 934 . + 0 ID=cds-TGD37102.1;Parent=gene-C9F07_32245;Dbxref=NCBI_GP:TGD37102.1;Name=TGD37102.1;gbkey=CDS;gene=fsa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=C9F07_32245;product=fructose-6-phosphate aldolase;protein_id=TGD37102.1;transl_table=11 PYKI01003207.1 Genbank gene 946 2049 . + . ID=gene-C9F07_32250;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=C9F07_32250 PYKI01003207.1 Protein Homology CDS 946 2049 . + 0 ID=cds-TGD37103.1;Parent=gene-C9F07_32250;Dbxref=NCBI_GP:TGD37103.1;Name=TGD37103.1;Note=forms dimers and octamers%3B involved in conversion of glycerol to dihydroxy-acetone;gbkey=CDS;gene=gldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=C9F07_32250;product=glycerol dehydrogenase;protein_id=TGD37103.1;transl_table=11 PYKI01003207.1 Genbank gene 2156 2811 . - . ID=gene-C9F07_32255;Name=C9F07_32255;end_range=2811,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32255;partial=true PYKI01003207.1 Protein Homology CDS 2156 2811 . - 2 ID=cds-TGD37104.1;Parent=gene-C9F07_32255;Dbxref=NCBI_GP:TGD37104.1;Name=TGD37104.1;end_range=2811,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457945.1;locus_tag=C9F07_32255;partial=true;product=catalase-peroxidase;protein_id=TGD37104.1;transl_table=11 ##sequence-region PYKI01000055.1 1 270 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000055.1 Genbank region 1 270 . + . ID=PYKI01000055.1:1..270;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000055.1 Genbank gene 51 270 . - . ID=gene-C9F07_00335;Name=C9F07_00335;end_range=270,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00335;partial=true PYKI01000055.1 Protein Homology CDS 51 270 . - 1 ID=cds-TGE30181.1;Parent=gene-C9F07_00335;Dbxref=NCBI_GP:TGE30181.1;Name=TGE30181.1;Note=involved in type 1 fimbriae biosynthesis%2C interacts with FimH;end_range=270,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455134.1;locus_tag=C9F07_00335;partial=true;product=fimbrial chaperone protein FimC;protein_id=TGE30181.1;transl_table=11 ##sequence-region PYKI01000397.1 1 270 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000397.1 Genbank region 1 270 . + . ID=PYKI01000397.1:1..270;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000397.1 Genbank gene 1 270 . + . ID=gene-C9F07_03015;Name=C9F07_03015;end_range=270,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03015;partial=true;start_range=.,1 PYKI01000397.1 Protein Homology CDS 1 270 . + 1 ID=cds-TGE22771.1;Parent=gene-C9F07_03015;Dbxref=NCBI_GP:TGE22771.1;Name=TGE22771.1;Note=activates sgrS under glucose-phosphate stress conditions;end_range=270,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454721.1;locus_tag=C9F07_03015;partial=true;product=transcriptional regulator SgrR;protein_id=TGE22771.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000080.1 1 269 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000080.1 Genbank region 1 269 . + . ID=PYKI01000080.1:1..269;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000080.1 Genbank gene 1 176 . - . ID=gene-C9F07_00500;Name=C9F07_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00500;partial=true;start_range=.,1 PYKI01000080.1 Protein Homology CDS 1 176 . - 0 ID=cds-TGE30158.1;Parent=gene-C9F07_00500;Dbxref=NCBI_GP:TGE30158.1;Name=TGE30158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001637494.1;locus_tag=C9F07_00500;partial=true;product=oligopeptidase B;protein_id=TGE30158.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001629.1 1 269 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001629.1 Genbank region 1 269 . + . ID=PYKI01001629.1:1..269;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001629.1 Genbank gene 1 269 . + . ID=gene-C9F07_15560;Name=C9F07_15560;end_range=269,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15560;partial=true;start_range=.,1 PYKI01001629.1 Protein Homology CDS 1 269 . + 1 ID=cds-TGD70527.1;Parent=gene-C9F07_15560;Dbxref=NCBI_GP:TGD70527.1;Name=TGD70527.1;Note=sigma-54 dependent activator family protein%3B activates the prpBCDE operon;end_range=269,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454962.1;locus_tag=C9F07_15560;partial=true;product=propionate catabolism operon regulatory protein PrpR;protein_id=TGD70527.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003043.1 1 269 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003043.1 Genbank region 1 269 . + . ID=PYKI01003043.1:1..269;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003043.1 Genbank pseudogene 108 263 . + . ID=gene-C9F07_30545;Name=C9F07_30545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30545;pseudo=true PYKI01003043.1 Protein Homology CDS 108 263 . + 0 ID=cds-C9F07_30545;Parent=gene-C9F07_30545;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457823.1;locus_tag=C9F07_30545;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01000142.1 1 268 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000142.1 Genbank region 1 268 . + . ID=PYKI01000142.1:1..268;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000142.1 Genbank pseudogene 53 214 . - . ID=gene-C9F07_00965;Name=C9F07_00965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00965;pseudo=true PYKI01000142.1 Protein Homology CDS 53 214 . - 0 ID=cds-C9F07_00965;Parent=gene-C9F07_00965;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417930.2;locus_tag=C9F07_00965;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01000968.1 1 268 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000968.1 Genbank region 1 268 . + . ID=PYKI01000968.1:1..268;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000968.1 Genbank gene 1 268 . - . ID=gene-C9F07_08845;Name=C9F07_08845;end_range=268,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08845;partial=true;start_range=.,1 PYKI01000968.1 Protein Homology CDS 1 268 . - 1 ID=cds-TGE00402.1;Parent=gene-C9F07_08845;Dbxref=NCBI_GP:TGE00402.1;Name=TGE00402.1;end_range=268,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835222.1;locus_tag=C9F07_08845;partial=true;product=DUF4765 domain-containing protein;protein_id=TGE00402.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003165.1 1 268 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003165.1 Genbank region 1 268 . + . ID=PYKI01003165.1:1..268;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003165.1 Genbank pseudogene 78 268 . - . ID=gene-C9F07_31765;Name=C9F07_31765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31765;pseudo=true PYKI01003165.1 Protein Homology CDS 78 268 . - 2 ID=cds-C9F07_31765;Parent=gene-C9F07_31765;Note=with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate%3B subunit Z may act as a chaperone for the Y subunit%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000676007.1;locus_tag=C9F07_31765;product=tagatose-bisphosphate aldolase;pseudo=true;transl_table=11 ##sequence-region PYKI01000599.1 1 268 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000599.1 Genbank region 1 268 . + . ID=PYKI01000599.1:1..268;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000599.1 Genbank gene 1 268 . + . ID=gene-C9F07_05125;Name=C9F07_05125;end_range=268,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05125;partial=true;start_range=.,1 PYKI01000599.1 Protein Homology CDS 1 268 . + 2 ID=cds-TGE14060.1;Parent=gene-C9F07_05125;Dbxref=NCBI_GP:TGE14060.1;Name=TGE14060.1;end_range=268,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455381.1;locus_tag=C9F07_05125;partial=true;product=hypothetical protein;protein_id=TGE14060.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003343.1 1 2808 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003343.1 Genbank region 1 2808 . + . ID=PYKI01003343.1:1..2808;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003343.1 Genbank gene 1 792 . + . ID=gene-C9F07_33640;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=C9F07_33640;partial=true;start_range=.,1 PYKI01003343.1 Protein Homology CDS 1 792 . + 0 ID=cds-TGD35062.1;Parent=gene-C9F07_33640;Dbxref=NCBI_GP:TGD35062.1;Name=TGD35062.1;gbkey=CDS;gene=leuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=C9F07_33640;partial=true;product=3-isopropylmalate dehydrogenase;protein_id=TGD35062.1;start_range=.,1;transl_table=11 PYKI01003343.1 Genbank gene 795 2195 . + . ID=gene-C9F07_33645;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=C9F07_33645 PYKI01003343.1 Protein Homology CDS 795 2195 . + 0 ID=cds-TGD35063.1;Parent=gene-C9F07_33645;Dbxref=NCBI_GP:TGD35063.1;Name=TGD35063.1;gbkey=CDS;gene=leuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454723.1;locus_tag=C9F07_33645;product=3-isopropylmalate dehydratase large subunit;protein_id=TGD35063.1;transl_table=11 PYKI01003343.1 Genbank gene 2206 2808 . + . ID=gene-C9F07_33650;Name=leuD;end_range=2808,.;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=C9F07_33650;partial=true PYKI01003343.1 Protein Homology CDS 2206 2808 . + 0 ID=cds-TGD35064.1;Parent=gene-C9F07_33650;Dbxref=NCBI_GP:TGD35064.1;Name=TGD35064.1;end_range=2808,.;gbkey=CDS;gene=leuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=C9F07_33650;partial=true;product=3-isopropylmalate dehydratase small subunit;protein_id=TGD35064.1;transl_table=11 ##sequence-region PYKI01002422.1 1 5911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002422.1 Genbank region 1 5911 . + . ID=PYKI01002422.1:1..5911;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002422.1 Genbank pseudogene 1 5116 . - . ID=gene-C9F07_23945;Name=C9F07_23945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23945;pseudo=true PYKI01002422.1 Protein Homology CDS 1 5116 . - 0 ID=cds-C9F07_23945;Parent=gene-C9F07_23945;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=C9F07_23945;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002422.1 Genbank gene 5236 5911 . - . ID=gene-C9F07_23950;Name=C9F07_23950;end_range=5911,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23950;partial=true PYKI01002422.1 Protein Homology CDS 5236 5911 . - 1 ID=cds-TGD51446.1;Parent=gene-C9F07_23950;Dbxref=NCBI_GP:TGD51446.1;Name=TGD51446.1;end_range=5911,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457049.1;locus_tag=C9F07_23950;partial=true;product=hypothetical protein;protein_id=TGD51446.1;transl_table=11 ##sequence-region PYKI01000239.1 1 267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000239.1 Genbank region 1 267 . + . ID=PYKI01000239.1:1..267;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000239.1 Genbank gene 1 267 . - . ID=gene-C9F07_01565;Name=dnaA;end_range=267,.;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=C9F07_01565;partial=true;start_range=.,1 PYKI01000239.1 Protein Homology CDS 1 267 . - 0 ID=cds-TGE27867.1;Parent=gene-C9F07_01565;Dbxref=NCBI_GP:TGE27867.1;Name=TGE27867.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;end_range=267,.;gbkey=CDS;gene=dnaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458104.1;locus_tag=C9F07_01565;partial=true;product=chromosomal replication initiator protein DnaA;protein_id=TGE27867.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003299.1 1 267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003299.1 Genbank region 1 267 . + . ID=PYKI01003299.1:1..267;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003299.1 Genbank gene 1 267 . - . ID=gene-C9F07_33170;Name=glnP;end_range=267,.;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=C9F07_33170;partial=true;start_range=.,1 PYKI01003299.1 Protein Homology CDS 1 267 . - 0 ID=cds-TGD36056.1;Parent=gene-C9F07_33170;Dbxref=NCBI_GP:TGD36056.1;Name=TGD36056.1;Note=similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine;end_range=267,.;gbkey=CDS;gene=glnP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=C9F07_33170;partial=true;product=glutamine ABC transporter permease GlnP;protein_id=TGD36056.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000758.1 1 267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000758.1 Genbank region 1 267 . + . ID=PYKI01000758.1:1..267;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000758.1 Genbank gene 1 267 . + . ID=gene-C9F07_06690;Name=C9F07_06690;end_range=267,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06690;partial=true;start_range=.,1 PYKI01000758.1 Protein Homology CDS 1 267 . + 0 ID=cds-TGE09257.1;Parent=gene-C9F07_06690;Dbxref=NCBI_GP:TGE09257.1;Name=TGE09257.1;end_range=267,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455566.1;locus_tag=C9F07_06690;partial=true;product=hypothetical protein;protein_id=TGE09257.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000212.1 1 267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000212.1 Genbank region 1 267 . + . ID=PYKI01000212.1:1..267;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01001607.1 1 267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001607.1 Genbank region 1 267 . + . ID=PYKI01001607.1:1..267;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001607.1 Genbank gene 1 267 . - . ID=gene-C9F07_15330;Name=C9F07_15330;end_range=267,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15330;partial=true;start_range=.,1 PYKI01001607.1 Protein Homology CDS 1 267 . - 2 ID=cds-TGD71164.1;Parent=gene-C9F07_15330;Dbxref=NCBI_GP:TGD71164.1;Name=TGD71164.1;end_range=267,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454989.1;locus_tag=C9F07_15330;partial=true;product=nuclease;protein_id=TGD71164.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002257.1 1 267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002257.1 Genbank region 1 267 . + . ID=PYKI01002257.1:1..267;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002257.1 Genbank pseudogene 94 237 . + . ID=gene-C9F07_22095;Name=C9F07_22095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22095;pseudo=true PYKI01002257.1 Protein Homology CDS 94 237 . + 0 ID=cds-C9F07_22095;Parent=gene-C9F07_22095;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456852.1;locus_tag=C9F07_22095;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;pseudo=true;transl_table=11 ##sequence-region PYKI01000237.1 1 267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000237.1 Genbank region 1 267 . + . ID=PYKI01000237.1:1..267;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000237.1 Genbank gene 1 267 . + . ID=gene-C9F07_01550;Name=C9F07_01550;end_range=267,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01550;partial=true;start_range=.,1 PYKI01000237.1 Protein Homology CDS 1 267 . + 0 ID=cds-TGE27870.1;Parent=gene-C9F07_01550;Dbxref=NCBI_GP:TGE27870.1;Name=TGE27870.1;end_range=267,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311976.1;locus_tag=C9F07_01550;partial=true;product=hypothetical protein;protein_id=TGE27870.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000027.1 1 266 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000027.1 Genbank region 1 266 . + . ID=PYKI01000027.1:1..266;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000027.1 Genbank gene 1 266 . + . ID=gene-C9F07_00160;Name=C9F07_00160;end_range=266,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00160;partial=true;start_range=.,1 PYKI01000027.1 Protein Homology CDS 1 266 . + 0 ID=cds-TGE30205.1;Parent=gene-C9F07_00160;Dbxref=NCBI_GP:TGE30205.1;Name=TGE30205.1;end_range=266,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454664.1;locus_tag=C9F07_00160;partial=true;product=sensor histidine kinase;protein_id=TGE30205.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002684.1 1 266 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002684.1 Genbank region 1 266 . + . ID=PYKI01002684.1:1..266;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002684.1 Genbank gene 1 266 . - . ID=gene-C9F07_26735;Name=C9F07_26735;end_range=266,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26735;partial=true;start_range=.,1 PYKI01002684.1 Protein Homology CDS 1 266 . - 0 ID=cds-TGD48652.1;Parent=gene-C9F07_26735;Dbxref=NCBI_GP:TGD48652.1;Name=TGD48652.1;end_range=266,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=C9F07_26735;partial=true;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=TGD48652.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001477.1 1 2807 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001477.1 Genbank region 1 2807 . + . ID=PYKI01001477.1:1..2807;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001477.1 Genbank gene 1 225 . - . ID=gene-C9F07_14010;Name=C9F07_14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14010;partial=true;start_range=.,1 PYKI01001477.1 Protein Homology CDS 1 225 . - 0 ID=cds-TGD80077.1;Parent=gene-C9F07_14010;Dbxref=NCBI_GP:TGD80077.1;Name=TGD80077.1;Note=catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455013.1;locus_tag=C9F07_14010;partial=true;product=thiamine-phosphate kinase;protein_id=TGD80077.1;start_range=.,1;transl_table=11 PYKI01001477.1 Genbank gene 304 723 . - . ID=gene-C9F07_14015;Name=C9F07_14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14015 PYKI01001477.1 Protein Homology CDS 304 723 . - 0 ID=cds-TGD80078.1;Parent=gene-C9F07_14015;Dbxref=NCBI_GP:TGD80078.1;Name=TGD80078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=C9F07_14015;product=N utilization substance protein B;protein_id=TGD80078.1;transl_table=11 PYKI01001477.1 Genbank gene 744 1214 . - . ID=gene-C9F07_14020;Name=C9F07_14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14020 PYKI01001477.1 Protein Homology CDS 744 1214 . - 0 ID=cds-TGD80079.1;Parent=gene-C9F07_14020;Dbxref=NCBI_GP:TGD80079.1;Name=TGD80079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455011.1;locus_tag=C9F07_14020;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=TGD80079.1;transl_table=11 PYKI01001477.1 Genbank gene 1303 2406 . - . ID=gene-C9F07_14025;Name=C9F07_14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14025 PYKI01001477.1 Protein Homology CDS 1303 2406 . - 0 ID=cds-TGD80080.1;Parent=gene-C9F07_14025;Dbxref=NCBI_GP:TGD80080.1;Name=TGD80080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001150223.1;locus_tag=C9F07_14025;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=TGD80080.1;transl_table=11 PYKI01001477.1 Genbank gene 2410 2807 . - . ID=gene-C9F07_14030;Name=C9F07_14030;end_range=2807,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14030;partial=true PYKI01001477.1 Protein Homology CDS 2410 2807 . - 2 ID=cds-TGD80081.1;Parent=gene-C9F07_14030;Dbxref=NCBI_GP:TGD80081.1;Name=TGD80081.1;end_range=2807,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=C9F07_14030;partial=true;product=transcriptional regulator NrdR;protein_id=TGD80081.1;transl_table=11 ##sequence-region PYKI01000872.1 1 266 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000872.1 Genbank region 1 266 . + . ID=PYKI01000872.1:1..266;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000872.1 Genbank gene 1 237 . - . ID=gene-C9F07_08010;Name=C9F07_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08010;partial=true;start_range=.,1 PYKI01000872.1 Protein Homology CDS 1 237 . - 0 ID=cds-TGE05068.1;Parent=gene-C9F07_08010;Dbxref=NCBI_GP:TGE05068.1;Name=TGE05068.1;Note=part of the MetNIQ methionine uptake system;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=C9F07_08010;partial=true;product=DL-methionine transporter permease subunit;protein_id=TGE05068.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000017.1 1 266 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000017.1 Genbank region 1 266 . + . ID=PYKI01000017.1:1..266;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000017.1 Genbank gene 1 266 . + . ID=gene-C9F07_00095;Name=C9F07_00095;end_range=266,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00095;partial=true;start_range=.,1 PYKI01000017.1 Protein Homology CDS 1 266 . + 0 ID=cds-TGE30213.1;Parent=gene-C9F07_00095;Dbxref=NCBI_GP:TGE30213.1;Name=TGE30213.1;end_range=266,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458408.1;locus_tag=C9F07_00095;partial=true;product=GMP/IMP nucleotidase;protein_id=TGE30213.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000317.1 1 266 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000317.1 Genbank region 1 266 . + . ID=PYKI01000317.1:1..266;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000317.1 Genbank pseudogene 59 266 . - . ID=gene-C9F07_02175;Name=C9F07_02175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02175;pseudo=true PYKI01000317.1 Protein Homology CDS 59 266 . - 1 ID=cds-C9F07_02175;Parent=gene-C9F07_02175;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=C9F07_02175;product=hydroxylamine reductase;pseudo=true;transl_table=11 ##sequence-region PYKI01000034.1 1 265 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000034.1 Genbank region 1 265 . + . ID=PYKI01000034.1:1..265;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000034.1 Genbank pseudogene 19 265 . - . ID=gene-C9F07_00195;Name=C9F07_00195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00195;pseudo=true PYKI01000034.1 Protein Homology CDS 19 265 . - 1 ID=cds-C9F07_00195;Parent=gene-C9F07_00195;Note=catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457111.1;locus_tag=C9F07_00195;product=S26 family signal peptidase;pseudo=true;transl_table=11 ##sequence-region PYKI01001088.1 1 265 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001088.1 Genbank region 1 265 . + . ID=PYKI01001088.1:1..265;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001088.1 Genbank gene 1 261 . - . ID=gene-C9F07_10140;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=C9F07_10140;partial=true;start_range=.,1 PYKI01001088.1 Protein Homology CDS 1 261 . - 0 ID=cds-TGD95559.1;Parent=gene-C9F07_10140;Dbxref=NCBI_GP:TGD95559.1;Name=TGD95559.1;gbkey=CDS;gene=ycgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=C9F07_10140;partial=true;product=flagellar brake protein YcgR;protein_id=TGD95559.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000083.1 1 265 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000083.1 Genbank region 1 265 . + . ID=PYKI01000083.1:1..265;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000083.1 Genbank gene 68 265 . - . ID=gene-C9F07_00520;Name=C9F07_00520;end_range=265,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00520;partial=true PYKI01000083.1 Protein Homology CDS 68 265 . - 0 ID=cds-TGE30155.1;Parent=gene-C9F07_00520;Dbxref=NCBI_GP:TGE30155.1;Name=TGE30155.1;end_range=265,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461440.1;locus_tag=C9F07_00520;partial=true;product=hypothetical protein;protein_id=TGE30155.1;transl_table=11 ##sequence-region PYKI01002518.1 1 265 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002518.1 Genbank region 1 265 . + . ID=PYKI01002518.1:1..265;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002518.1 Genbank gene 1 265 . - . ID=gene-C9F07_24950;Name=C9F07_24950;end_range=265,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24950;partial=true;start_range=.,1 PYKI01002518.1 Protein Homology CDS 1 265 . - 0 ID=cds-TGD50141.1;Parent=gene-C9F07_24950;Dbxref=NCBI_GP:TGD50141.1;Name=TGD50141.1;end_range=265,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458784.1;locus_tag=C9F07_24950;partial=true;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=TGD50141.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000949.1 1 265 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000949.1 Genbank region 1 265 . + . ID=PYKI01000949.1:1..265;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000949.1 Genbank gene 1 265 . - . ID=gene-C9F07_08685;Name=C9F07_08685;end_range=265,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08685;partial=true;start_range=.,1 PYKI01000949.1 Protein Homology CDS 1 265 . - 1 ID=cds-TGE01549.1;Parent=gene-C9F07_08685;Dbxref=NCBI_GP:TGE01549.1;Name=TGE01549.1;end_range=265,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454782.1;locus_tag=C9F07_08685;partial=true;product=hypothetical protein;protein_id=TGE01549.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000277.1 1 265 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000277.1 Genbank region 1 265 . + . ID=PYKI01000277.1:1..265;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000277.1 Genbank gene 1 265 . - . ID=gene-C9F07_01805;Name=C9F07_01805;end_range=265,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01805;partial=true;start_range=.,1 PYKI01000277.1 Protein Homology CDS 1 265 . - 1 ID=cds-TGE27830.1;Parent=gene-C9F07_01805;Dbxref=NCBI_GP:TGE27830.1;Name=TGE27830.1;end_range=265,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457558.1;locus_tag=C9F07_01805;partial=true;product=anion permease;protein_id=TGE27830.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001768.1 1 265 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001768.1 Genbank region 1 265 . + . ID=PYKI01001768.1:1..265;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001768.1 Genbank gene 1 265 . + . ID=gene-C9F07_16990;Name=C9F07_16990;end_range=265,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16990;partial=true;start_range=.,1 PYKI01001768.1 Protein Homology CDS 1 265 . + 1 ID=cds-TGD67842.1;Parent=gene-C9F07_16990;Dbxref=NCBI_GP:TGD67842.1;Name=TGD67842.1;end_range=265,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458329.1;locus_tag=C9F07_16990;partial=true;product=hypothetical protein;protein_id=TGD67842.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002282.1 1 2803 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002282.1 Genbank region 1 2803 . + . ID=PYKI01002282.1:1..2803;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002282.1 Genbank gene 1 545 . + . ID=gene-C9F07_22345;Name=C9F07_22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22345;partial=true;start_range=.,1 PYKI01002282.1 Protein Homology CDS 1 545 . + 2 ID=cds-TGD54848.1;Parent=gene-C9F07_22345;Dbxref=NCBI_GP:TGD54848.1;Name=TGD54848.1;Note=catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=C9F07_22345;partial=true;product=fructose-bisphosphatase class I;protein_id=TGD54848.1;start_range=.,1;transl_table=11 PYKI01002282.1 Genbank gene 772 1302 . + . ID=gene-C9F07_22350;Name=C9F07_22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22350 PYKI01002282.1 Protein Homology CDS 772 1302 . + 0 ID=cds-TGD54849.1;Parent=gene-C9F07_22350;Dbxref=NCBI_GP:TGD54849.1;Name=TGD54849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458851.1;locus_tag=C9F07_22350;product=inorganic pyrophosphatase;protein_id=TGD54849.1;transl_table=11 PYKI01002282.1 Genbank gene 1712 2803 . + . ID=gene-C9F07_22355;Name=C9F07_22355;end_range=2803,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22355;partial=true PYKI01002282.1 Protein Homology CDS 1712 2803 . + 0 ID=cds-TGD54850.1;Parent=gene-C9F07_22355;Dbxref=NCBI_GP:TGD54850.1;Name=TGD54850.1;end_range=2803,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=C9F07_22355;partial=true;product=metal-dependent hydrolase;protein_id=TGD54850.1;transl_table=11 ##sequence-region PYKI01002034.1 1 265 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002034.1 Genbank region 1 265 . + . ID=PYKI01002034.1:1..265;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002034.1 Genbank gene 1 265 . + . ID=gene-C9F07_19640;Name=flgL;end_range=265,.;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=C9F07_19640;partial=true;start_range=.,1 PYKI01002034.1 Protein Homology CDS 1 265 . + 0 ID=cds-TGD60020.1;Parent=gene-C9F07_19640;Dbxref=NCBI_GP:TGD60020.1;Name=TGD60020.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes;end_range=265,.;gbkey=CDS;gene=flgL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455677.1;locus_tag=C9F07_19640;partial=true;product=flagellar hook-filament junction protein FlgL;protein_id=TGD60020.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000060.1 1 264 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000060.1 Genbank region 1 264 . + . ID=PYKI01000060.1:1..264;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000060.1 Genbank gene 1 264 . - . ID=gene-C9F07_00360;Name=C9F07_00360;end_range=264,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00360;partial=true;start_range=.,1 PYKI01000060.1 Protein Homology CDS 1 264 . - 0 ID=cds-TGE30178.1;Parent=gene-C9F07_00360;Dbxref=NCBI_GP:TGE30178.1;Name=TGE30178.1;end_range=264,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=C9F07_00360;partial=true;product=zinc-binding dehydrogenase;protein_id=TGE30178.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000265.1 1 264 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000265.1 Genbank region 1 264 . + . ID=PYKI01000265.1:1..264;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000265.1 Genbank gene 1 193 . + . ID=gene-C9F07_01725;Name=C9F07_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01725;partial=true;start_range=.,1 PYKI01000265.1 Protein Homology CDS 1 193 . + 1 ID=cds-TGE27844.1;Parent=gene-C9F07_01725;Dbxref=NCBI_GP:TGE27844.1;Name=TGE27844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=C9F07_01725;partial=true;product=hypothetical protein;protein_id=TGE27844.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000161.1 1 264 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000161.1 Genbank region 1 264 . + . ID=PYKI01000161.1:1..264;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000161.1 Genbank pseudogene 1 264 . - . ID=gene-C9F07_01100;Name=C9F07_01100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01100;pseudo=true PYKI01000161.1 Protein Homology CDS 1 264 . - 1 ID=cds-C9F07_01100;Parent=gene-C9F07_01100;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417544.5;locus_tag=C9F07_01100;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002843.1 1 263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002843.1 Genbank region 1 263 . + . ID=PYKI01002843.1:1..263;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002843.1 Genbank pseudogene 62 263 . - . ID=gene-C9F07_28435;Name=C9F07_28435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28435;pseudo=true PYKI01002843.1 Protein Homology CDS 62 263 . - 1 ID=cds-C9F07_28435;Parent=gene-C9F07_28435;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049823.1;locus_tag=C9F07_28435;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001234.1 1 263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001234.1 Genbank region 1 263 . + . ID=PYKI01001234.1:1..263;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001234.1 Genbank gene 1 263 . + . ID=gene-C9F07_11530;Name=glnP;end_range=263,.;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=C9F07_11530;partial=true;start_range=.,1 PYKI01001234.1 Protein Homology CDS 1 263 . + 1 ID=cds-TGD90979.1;Parent=gene-C9F07_11530;Dbxref=NCBI_GP:TGD90979.1;Name=TGD90979.1;Note=similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine;end_range=263,.;gbkey=CDS;gene=glnP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=C9F07_11530;partial=true;product=glutamine ABC transporter permease GlnP;protein_id=TGD90979.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000357.1 1 263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000357.1 Genbank region 1 263 . + . ID=PYKI01000357.1:1..263;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000357.1 Genbank gene 1 263 . + . ID=gene-C9F07_02700;Name=C9F07_02700;end_range=263,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02700;partial=true;start_range=.,1 PYKI01000357.1 Protein Homology CDS 1 263 . + 1 ID=cds-TGE23635.1;Parent=gene-C9F07_02700;Dbxref=NCBI_GP:TGE23635.1;Name=TGE23635.1;end_range=263,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455735.1;locus_tag=C9F07_02700;partial=true;product=hypothetical protein;protein_id=TGE23635.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002546.1 1 262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002546.1 Genbank region 1 262 . + . ID=PYKI01002546.1:1..262;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002546.1 Genbank gene 1 262 . - . ID=gene-C9F07_25265;Name=ghrA;end_range=262,.;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=C9F07_25265;partial=true;start_range=.,1 PYKI01002546.1 Protein Homology CDS 1 262 . - 2 ID=cds-TGD49954.1;Parent=gene-C9F07_25265;Dbxref=NCBI_GP:TGD49954.1;Name=TGD49954.1;Note=catalyzes the formation of glycolate and glycerate from glyoxylate and hydroxypyruvate%2C respectively;end_range=262,.;gbkey=CDS;gene=ghrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=C9F07_25265;partial=true;product=bifunctional glyoxylate/hydroxypyruvate reductase A;protein_id=TGD49954.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001784.1 1 262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001784.1 Genbank region 1 262 . + . ID=PYKI01001784.1:1..262;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001784.1 Genbank gene 1 262 . - . ID=gene-C9F07_17145;Name=C9F07_17145;end_range=262,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17145;partial=true;start_range=.,1 PYKI01001784.1 Protein Homology CDS 1 262 . - 1 ID=cds-TGD66819.1;Parent=gene-C9F07_17145;Dbxref=NCBI_GP:TGD66819.1;Name=TGD66819.1;end_range=262,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458507.1;locus_tag=C9F07_17145;partial=true;product=vitamin B12 dependent methionine synthase%2C activation domain protein;protein_id=TGD66819.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000799.1 1 2802 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000799.1 Genbank region 1 2802 . + . ID=PYKI01000799.1:1..2802;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000799.1 Genbank gene 1 1120 . + . ID=gene-C9F07_07185;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=C9F07_07185;partial=true;start_range=.,1 PYKI01000799.1 Protein Homology CDS 1 1120 . + 1 ID=cds-TGE09140.1;Parent=gene-C9F07_07185;Dbxref=NCBI_GP:TGE09140.1;Name=TGE09140.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454677.1;locus_tag=C9F07_07185;partial=true;product=carbamoyl phosphate synthase large subunit;protein_id=TGE09140.1;start_range=.,1;transl_table=11 PYKI01000799.1 Genbank gene 1394 1789 . + . ID=gene-C9F07_07190;Name=C9F07_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07190 PYKI01000799.1 Protein Homology CDS 1394 1789 . + 0 ID=cds-TGE09141.1;Parent=gene-C9F07_07190;Dbxref=NCBI_GP:TGE09141.1;Name=TGE09141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454678.1;locus_tag=C9F07_07190;product=CaiF/GrlA family transcriptional regulator;protein_id=TGE09141.1;transl_table=11 PYKI01000799.1 Genbank gene 1866 2462 . - . ID=gene-C9F07_07195;Name=C9F07_07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07195 PYKI01000799.1 Protein Homology CDS 1866 2462 . - 0 ID=cds-TGE09142.1;Parent=gene-C9F07_07195;Dbxref=NCBI_GP:TGE09142.1;Name=TGE09142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454679.1;locus_tag=C9F07_07195;product=carnitine operon protein CaiE;protein_id=TGE09142.1;transl_table=11 PYKI01000799.1 Genbank gene 2571 2802 . - . ID=gene-C9F07_07200;Name=C9F07_07200;end_range=2802,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07200;partial=true PYKI01000799.1 Protein Homology CDS 2571 2802 . - 1 ID=cds-TGE09143.1;Parent=gene-C9F07_07200;Dbxref=NCBI_GP:TGE09143.1;Name=TGE09143.1;Note=catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA;end_range=2802,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=C9F07_07200;partial=true;product=carnitinyl-CoA dehydratase;protein_id=TGE09143.1;transl_table=11 ##sequence-region PYKI01003327.1 1 262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003327.1 Genbank region 1 262 . + . ID=PYKI01003327.1:1..262;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003327.1 Genbank gene 1 262 . - . ID=gene-C9F07_33470;Name=C9F07_33470;end_range=262,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33470;partial=true;start_range=.,1 PYKI01003327.1 Protein Homology CDS 1 262 . - 0 ID=cds-TGD35918.1;Parent=gene-C9F07_33470;Dbxref=NCBI_GP:TGD35918.1;Name=TGD35918.1;end_range=262,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458065.1;locus_tag=C9F07_33470;partial=true;product=hypothetical protein;protein_id=TGD35918.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000890.1 1 262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000890.1 Genbank region 1 262 . + . ID=PYKI01000890.1:1..262;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000890.1 Genbank gene 1 262 . + . ID=gene-C9F07_08145;Name=C9F07_08145;end_range=262,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08145;partial=true;start_range=.,1 PYKI01000890.1 Protein Homology CDS 1 262 . + 2 ID=cds-TGE03675.1;Parent=gene-C9F07_08145;Dbxref=NCBI_GP:TGE03675.1;Name=TGE03675.1;end_range=262,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=C9F07_08145;partial=true;product=hypothetical protein;protein_id=TGE03675.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000050.1 1 262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000050.1 Genbank region 1 262 . + . ID=PYKI01000050.1:1..262;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000050.1 Genbank gene 33 262 . + . ID=gene-C9F07_00275;Name=C9F07_00275;end_range=262,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00275;partial=true PYKI01000050.1 Protein Homology CDS 33 262 . + 0 ID=cds-TGE30191.1;Parent=gene-C9F07_00275;Dbxref=NCBI_GP:TGE30191.1;Name=TGE30191.1;end_range=262,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954556.1;locus_tag=C9F07_00275;partial=true;product=serine endoprotease DegQ;protein_id=TGE30191.1;transl_table=11 ##sequence-region PYKI01000162.1 1 262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000162.1 Genbank region 1 262 . + . ID=PYKI01000162.1:1..262;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000162.1 Genbank pseudogene 77 214 . - . ID=gene-C9F07_01105;Name=C9F07_01105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01105;pseudo=true PYKI01000162.1 Protein Homology CDS 77 214 . - 0 ID=cds-C9F07_01105;Parent=gene-C9F07_01105;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457359.1;locus_tag=C9F07_01105;product=flavodoxin;pseudo=true;transl_table=11 ##sequence-region PYKI01001849.1 1 262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001849.1 Genbank region 1 262 . + . ID=PYKI01001849.1:1..262;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001849.1 Genbank gene 1 262 . - . ID=gene-C9F07_17775;Name=cpxA;end_range=262,.;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=C9F07_17775;partial=true;start_range=.,1 PYKI01001849.1 Protein Homology CDS 1 262 . - 2 ID=cds-TGD63477.1;Parent=gene-C9F07_17775;Dbxref=NCBI_GP:TGD63477.1;Name=TGD63477.1;Note=part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors;end_range=262,.;gbkey=CDS;gene=cpxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457993.1;locus_tag=C9F07_17775;partial=true;product=two-component system sensor histidine kinase CpxA;protein_id=TGD63477.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003005.1 1 262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003005.1 Genbank region 1 262 . + . ID=PYKI01003005.1:1..262;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003005.1 Genbank gene 1 262 . + . ID=gene-C9F07_30120;Name=C9F07_30120;end_range=262,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30120;partial=true;start_range=.,1 PYKI01003005.1 Protein Homology CDS 1 262 . + 0 ID=cds-TGD41215.1;Parent=gene-C9F07_30120;Dbxref=NCBI_GP:TGD41215.1;Name=TGD41215.1;end_range=262,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458428.1;locus_tag=C9F07_30120;partial=true;product=hypothetical protein;protein_id=TGD41215.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001358.1 1 261 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001358.1 Genbank region 1 261 . + . ID=PYKI01001358.1:1..261;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001358.1 Genbank gene 1 261 . - . ID=gene-C9F07_12760;Name=C9F07_12760;end_range=261,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12760;partial=true;start_range=.,1 PYKI01001358.1 Protein Homology CDS 1 261 . - 2 ID=cds-TGD85017.1;Parent=gene-C9F07_12760;Dbxref=NCBI_GP:TGD85017.1;Name=TGD85017.1;end_range=261,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=C9F07_12760;partial=true;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=TGD85017.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000091.1 1 261 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000091.1 Genbank region 1 261 . + . ID=PYKI01000091.1:1..261;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000091.1 Genbank gene 146 261 . + . ID=gene-C9F07_00590;Name=C9F07_00590;end_range=261,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00590;partial=true PYKI01000091.1 Protein Homology CDS 146 261 . + 0 ID=cds-TGE30144.1;Parent=gene-C9F07_00590;Dbxref=NCBI_GP:TGE30144.1;Name=TGE30144.1;end_range=261,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308550.1;locus_tag=C9F07_00590;partial=true;product=DNA polymerase III subunit gamma/tau;protein_id=TGE30144.1;transl_table=11 ##sequence-region PYKI01000716.1 1 261 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000716.1 Genbank region 1 261 . + . ID=PYKI01000716.1:1..261;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000716.1 Genbank pseudogene 36 261 . - . ID=gene-C9F07_06280;Name=C9F07_06280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06280;pseudo=true PYKI01000716.1 Protein Homology CDS 36 261 . - 1 ID=cds-C9F07_06280;Parent=gene-C9F07_06280;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101092.1;locus_tag=C9F07_06280;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001245.1 1 261 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001245.1 Genbank region 1 261 . + . ID=PYKI01001245.1:1..261;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001245.1 Genbank gene 1 261 . - . ID=gene-C9F07_11615;Name=C9F07_11615;end_range=261,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11615;partial=true;start_range=.,1 PYKI01001245.1 Protein Homology CDS 1 261 . - 0 ID=cds-TGD90206.1;Parent=gene-C9F07_11615;Dbxref=NCBI_GP:TGD90206.1;Name=TGD90206.1;end_range=261,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458149.1;locus_tag=C9F07_11615;partial=true;product=hypothetical protein;protein_id=TGD90206.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002139.1 1 2800 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002139.1 Genbank region 1 2800 . + . ID=PYKI01002139.1:1..2800;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002139.1 Genbank gene 1 299 . - . ID=gene-C9F07_20735;Name=C9F07_20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20735;partial=true;start_range=.,1 PYKI01002139.1 Protein Homology CDS 1 299 . - 0 ID=cds-TGD57818.1;Parent=gene-C9F07_20735;Dbxref=NCBI_GP:TGD57818.1;Name=TGD57818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=C9F07_20735;partial=true;product=elongation factor Tu;protein_id=TGD57818.1;start_range=.,1;transl_table=11 PYKI01002139.1 Genbank pseudogene 371 2485 . - . ID=gene-C9F07_20740;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=pseudogene;locus_tag=C9F07_20740;pseudo=true PYKI01002139.1 Protein Homology CDS 371 2485 . - 0 ID=cds-C9F07_20740;Parent=gene-C9F07_20740;Note=internal stop;gbkey=CDS;gene=fusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=C9F07_20740;product=elongation factor G;pseudo=true;transl_table=11 PYKI01002139.1 Genbank gene 2582 2800 . - . ID=gene-C9F07_20745;Name=C9F07_20745;end_range=2800,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20745;partial=true PYKI01002139.1 Protein Homology CDS 2582 2800 . - 0 ID=cds-TGD57819.1;Parent=gene-C9F07_20745;Dbxref=NCBI_GP:TGD57819.1;Name=TGD57819.1;end_range=2800,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007644345.1;locus_tag=C9F07_20745;partial=true;product=hypothetical protein;protein_id=TGD57819.1;transl_table=11 ##sequence-region PYKI01000042.1 1 261 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000042.1 Genbank region 1 261 . + . ID=PYKI01000042.1:1..261;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000042.1 Genbank gene 83 261 . + . ID=gene-C9F07_00235;Name=C9F07_00235;end_range=261,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00235;partial=true PYKI01000042.1 Protein Homology CDS 83 261 . + 0 ID=cds-TGE30196.1;Parent=gene-C9F07_00235;Dbxref=NCBI_GP:TGE30196.1;Name=TGE30196.1;end_range=261,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=C9F07_00235;partial=true;product=DNA polymerase III subunit beta;protein_id=TGE30196.1;transl_table=11 ##sequence-region PYKI01001690.1 1 260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001690.1 Genbank region 1 260 . + . ID=PYKI01001690.1:1..260;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001690.1 Genbank gene 65 198 . + . ID=gene-C9F07_16125;Name=C9F07_16125;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F07_16125 PYKI01001690.1 cmsearch ncRNA 65 198 . + . ID=rna-C9F07_16125;Parent=gene-C9F07_16125;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_16125;product=RtT sRNA PYKI01001690.1 cmsearch exon 65 198 . + . ID=exon-C9F07_16125-1;Parent=rna-C9F07_16125;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_16125;product=RtT sRNA ##sequence-region PYKI01002686.1 1 260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002686.1 Genbank region 1 260 . + . ID=PYKI01002686.1:1..260;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002686.1 Genbank pseudogene 1 260 . + . ID=gene-C9F07_26745;Name=C9F07_26745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26745;pseudo=true PYKI01002686.1 Protein Homology CDS 1 260 . + 0 ID=cds-C9F07_26745;Parent=gene-C9F07_26745;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456496.1;locus_tag=C9F07_26745;product=DJ-1 family protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000154.1 1 260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000154.1 Genbank region 1 260 . + . ID=PYKI01000154.1:1..260;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000154.1 Genbank pseudogene 44 199 . - . ID=gene-C9F07_01030;Name=C9F07_01030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01030;pseudo=true PYKI01000154.1 Protein Homology CDS 44 199 . - 0 ID=cds-C9F07_01030;Parent=gene-C9F07_01030;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=C9F07_01030;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002155.1 1 260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002155.1 Genbank region 1 260 . + . ID=PYKI01002155.1:1..260;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002155.1 Genbank pseudogene 25 260 . - . ID=gene-C9F07_20930;Name=C9F07_20930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20930;pseudo=true PYKI01002155.1 Protein Homology CDS 25 260 . - 2 ID=cds-C9F07_20930;Parent=gene-C9F07_20930;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456911.1;locus_tag=C9F07_20930;product=aspartate-semialdehyde dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01001136.1 1 260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001136.1 Genbank region 1 260 . + . ID=PYKI01001136.1:1..260;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001136.1 Genbank gene 1 260 . + . ID=gene-C9F07_10595;Name=C9F07_10595;end_range=260,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10595;partial=true;start_range=.,1 PYKI01001136.1 Protein Homology CDS 1 260 . + 0 ID=cds-TGD94638.1;Parent=gene-C9F07_10595;Dbxref=NCBI_GP:TGD94638.1;Name=TGD94638.1;end_range=260,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=C9F07_10595;partial=true;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=TGD94638.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000506.1 1 259 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000506.1 Genbank region 1 259 . + . ID=PYKI01000506.1:1..259;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01001468.1 1 259 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001468.1 Genbank region 1 259 . + . ID=PYKI01001468.1:1..259;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001468.1 Genbank gene 1 259 . - . ID=gene-C9F07_13920;Name=C9F07_13920;end_range=259,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13920;partial=true;start_range=.,1 PYKI01001468.1 Protein Homology CDS 1 259 . - 0 ID=cds-TGD81036.1;Parent=gene-C9F07_13920;Dbxref=NCBI_GP:TGD81036.1;Name=TGD81036.1;Note=Confers resistance to norfloxacin and enoxacin;end_range=259,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=C9F07_13920;partial=true;product=MFS transporter;protein_id=TGD81036.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001289.1 1 259 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001289.1 Genbank region 1 259 . + . ID=PYKI01001289.1:1..259;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001289.1 Genbank gene 1 259 . - . ID=gene-C9F07_12065;Name=C9F07_12065;end_range=259,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12065;partial=true;start_range=.,1 PYKI01001289.1 Protein Homology CDS 1 259 . - 2 ID=cds-TGD87670.1;Parent=gene-C9F07_12065;Dbxref=NCBI_GP:TGD87670.1;Name=TGD87670.1;end_range=259,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455738.1;locus_tag=C9F07_12065;partial=true;product=hypothetical protein;protein_id=TGD87670.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001075.1 1 259 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001075.1 Genbank region 1 259 . + . ID=PYKI01001075.1:1..259;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001075.1 Genbank gene 1 259 . - . ID=gene-C9F07_09980;Name=C9F07_09980;end_range=259,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09980;partial=true;start_range=.,1 PYKI01001075.1 Protein Homology CDS 1 259 . - 0 ID=cds-TGD95829.1;Parent=gene-C9F07_09980;Dbxref=NCBI_GP:TGD95829.1;Name=TGD95829.1;end_range=259,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455922.1;locus_tag=C9F07_09980;partial=true;product=hypothetical protein;protein_id=TGD95829.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002600.1 1 259 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002600.1 Genbank region 1 259 . + . ID=PYKI01002600.1:1..259;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002600.1 Genbank gene 1 259 . + . ID=gene-C9F07_25820;Name=cysN;end_range=259,.;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=C9F07_25820;partial=true;start_range=.,1 PYKI01002600.1 Protein Homology CDS 1 259 . + 2 ID=cds-TGD49615.1;Parent=gene-C9F07_25820;Dbxref=NCBI_GP:TGD49615.1;Name=TGD49615.1;Note=may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ;end_range=259,.;gbkey=CDS;gene=cysN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457323.1;locus_tag=C9F07_25820;partial=true;product=sulfate adenylyltransferase subunit CysN;protein_id=TGD49615.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002013.1 1 259 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002013.1 Genbank region 1 259 . + . ID=PYKI01002013.1:1..259;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002013.1 Genbank pseudogene 1 259 . - . ID=gene-C9F07_19410;Name=C9F07_19410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19410;pseudo=true PYKI01002013.1 Protein Homology CDS 1 259 . - 2 ID=cds-C9F07_19410;Parent=gene-C9F07_19410;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=C9F07_19410;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000903.1 1 259 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000903.1 Genbank region 1 259 . + . ID=PYKI01000903.1:1..259;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000903.1 Genbank gene 1 259 . - . ID=gene-C9F07_08250;Name=C9F07_08250;end_range=259,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08250;partial=true;start_range=.,1 PYKI01000903.1 Protein Homology CDS 1 259 . - 0 ID=cds-TGE03205.1;Parent=gene-C9F07_08250;Dbxref=NCBI_GP:TGE03205.1;Name=TGE03205.1;Note=PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues;end_range=259,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456447.1;locus_tag=C9F07_08250;partial=true;product=oligopeptidase B;protein_id=TGE03205.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000341.1 1 259 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000341.1 Genbank region 1 259 . + . ID=PYKI01000341.1:1..259;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000341.1 Genbank gene 1 259 . + . ID=gene-C9F07_02525;Name=C9F07_02525;end_range=259,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02525;partial=true;start_range=.,1 PYKI01000341.1 Protein Homology CDS 1 259 . + 2 ID=cds-TGE26833.1;Parent=gene-C9F07_02525;Dbxref=NCBI_GP:TGE26833.1;Name=TGE26833.1;Note=citryl-ACP lyase%3B catalyzes the formation of acetate and oxaloacetate from citrate;end_range=259,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308682.2;locus_tag=C9F07_02525;partial=true;product=citrate lyase subunit beta;protein_id=TGE26833.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000403.1 1 258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000403.1 Genbank region 1 258 . + . ID=PYKI01000403.1:1..258;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000403.1 Genbank pseudogene 1 250 . - . ID=gene-C9F07_03085;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=pseudogene;locus_tag=C9F07_03085;pseudo=true PYKI01000403.1 Protein Homology CDS 1 250 . - 0 ID=cds-C9F07_03085;Parent=gene-C9F07_03085;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=pgi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=C9F07_03085;product=glucose-6-phosphate isomerase;pseudo=true;transl_table=11 ##sequence-region PYKI01001981.1 1 258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001981.1 Genbank region 1 258 . + . ID=PYKI01001981.1:1..258;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01000300.1 1 258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000300.1 Genbank region 1 258 . + . ID=PYKI01000300.1:1..258;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000300.1 Genbank gene 1 176 . - . ID=gene-C9F07_01980;Name=C9F07_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01980;partial=true;start_range=.,1 PYKI01000300.1 Protein Homology CDS 1 176 . - 0 ID=cds-TGE27801.1;Parent=gene-C9F07_01980;Dbxref=NCBI_GP:TGE27801.1;Name=TGE27801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=C9F07_01980;partial=true;product=peptidoglycan-binding protein LysM;protein_id=TGE27801.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001410.1 1 258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001410.1 Genbank region 1 258 . + . ID=PYKI01001410.1:1..258;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001410.1 Genbank gene 1 258 . + . ID=gene-C9F07_13370;Name=C9F07_13370;end_range=258,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13370;partial=true;start_range=.,1 PYKI01001410.1 Protein Homology CDS 1 258 . + 2 ID=cds-TGD83840.1;Parent=gene-C9F07_13370;Dbxref=NCBI_GP:TGD83840.1;Name=TGD83840.1;end_range=258,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458190.1;locus_tag=C9F07_13370;partial=true;product=LysR family transcriptional regulator;protein_id=TGD83840.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002982.1 1 2791 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002982.1 Genbank region 1 2791 . + . ID=PYKI01002982.1:1..2791;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002982.1 Genbank gene 1 294 . - . ID=gene-C9F07_29890;Name=C9F07_29890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29890;partial=true;start_range=.,1 PYKI01002982.1 Protein Homology CDS 1 294 . - 0 ID=cds-TGD41472.1;Parent=gene-C9F07_29890;Dbxref=NCBI_GP:TGD41472.1;Name=TGD41472.1;Note=NAD-binding;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=C9F07_29890;partial=true;product=L-idonate 5-dehydrogenase;protein_id=TGD41472.1;start_range=.,1;transl_table=11 PYKI01002982.1 Genbank gene 511 1041 . + . ID=gene-C9F07_29895;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=C9F07_29895 PYKI01002982.1 Protein Homology CDS 511 1041 . + 0 ID=cds-TGD41473.1;Parent=gene-C9F07_29895;Dbxref=NCBI_GP:TGD41473.1;Name=TGD41473.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=C9F07_29895;product=gluconate kinase;protein_id=TGD41473.1;transl_table=11 PYKI01002982.1 Genbank gene 1069 2088 . - . ID=gene-C9F07_29900;Name=C9F07_29900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29900 PYKI01002982.1 Protein Homology CDS 1069 2088 . - 0 ID=cds-TGD41474.1;Parent=gene-C9F07_29900;Dbxref=NCBI_GP:TGD41474.1;Name=TGD41474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=C9F07_29900;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=TGD41474.1;transl_table=11 PYKI01002982.1 Genbank gene 2311 2395 . + . ID=gene-C9F07_29905;Name=C9F07_29905;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_29905 PYKI01002982.1 tRNAscan-SE tRNA 2311 2395 . + . ID=rna-C9F07_29905;Parent=gene-C9F07_29905;anticodon=(pos:2345..2347);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_29905;product=tRNA-Leu PYKI01002982.1 tRNAscan-SE exon 2311 2395 . + . ID=exon-C9F07_29905-1;Parent=rna-C9F07_29905;anticodon=(pos:2345..2347);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_29905;product=tRNA-Leu ##sequence-region PYKI01000133.1 1 258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000133.1 Genbank region 1 258 . + . ID=PYKI01000133.1:1..258;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000133.1 Genbank gene 1 258 . - . ID=gene-C9F07_00905;Name=C9F07_00905;end_range=258,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00905;partial=true;start_range=.,1 PYKI01000133.1 Protein Homology CDS 1 258 . - 0 ID=cds-TGE30092.1;Parent=gene-C9F07_00905;Dbxref=NCBI_GP:TGE30092.1;Name=TGE30092.1;Note=electron transport protein;end_range=258,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458856.1;locus_tag=C9F07_00905;partial=true;product=cytochrome b562;protein_id=TGE30092.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001481.1 1 258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001481.1 Genbank region 1 258 . + . ID=PYKI01001481.1:1..258;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001481.1 Genbank gene 40 258 . + . ID=gene-C9F07_14070;Name=C9F07_14070;end_range=258,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14070;partial=true PYKI01001481.1 Protein Homology CDS 40 258 . + 0 ID=cds-TGD80071.1;Parent=gene-C9F07_14070;Dbxref=NCBI_GP:TGD80071.1;Name=TGD80071.1;end_range=258,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000146588.1;locus_tag=C9F07_14070;partial=true;product=hypothetical protein;protein_id=TGD80071.1;transl_table=11 ##sequence-region PYKI01002838.1 1 257 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002838.1 Genbank region 1 257 . + . ID=PYKI01002838.1:1..257;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002838.1 Genbank gene 1 257 . + . ID=gene-C9F07_28385;Name=C9F07_28385;end_range=257,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28385;partial=true;start_range=.,1 PYKI01002838.1 Protein Homology CDS 1 257 . + 1 ID=cds-TGD45575.1;Parent=gene-C9F07_28385;Dbxref=NCBI_GP:TGD45575.1;Name=TGD45575.1;Note=catalyzes the formation of acetate from pyruvate;end_range=257,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532507.1;locus_tag=C9F07_28385;partial=true;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=TGD45575.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001125.1 1 257 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001125.1 Genbank region 1 257 . + . ID=PYKI01001125.1:1..257;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001125.1 Genbank pseudogene 68 257 . + . ID=gene-C9F07_10470;Name=C9F07_10470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10470;pseudo=true PYKI01001125.1 Protein Homology CDS 68 257 . + 0 ID=cds-C9F07_10470;Parent=gene-C9F07_10470;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456468.1;locus_tag=C9F07_10470;product=aspartate--tRNA ligase;pseudo=true;transl_table=11 ##sequence-region PYKI01000190.1 1 257 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000190.1 Genbank region 1 257 . + . ID=PYKI01000190.1:1..257;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000190.1 Genbank gene 90 257 . + . ID=gene-C9F07_01285;Name=C9F07_01285;end_range=257,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01285;partial=true PYKI01000190.1 Protein Homology CDS 90 257 . + 0 ID=cds-TGE30035.1;Parent=gene-C9F07_01285;Dbxref=NCBI_GP:TGE30035.1;Name=TGE30035.1;end_range=257,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455238.1;locus_tag=C9F07_01285;partial=true;product=nucleoside triphosphate hydrolase;protein_id=TGE30035.1;transl_table=11 ##sequence-region PYKI01002930.1 1 257 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002930.1 Genbank region 1 257 . + . ID=PYKI01002930.1:1..257;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002930.1 Genbank gene 1 257 . - . ID=gene-C9F07_29355;Name=C9F07_29355;end_range=257,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29355;partial=true;start_range=.,1 PYKI01002930.1 Protein Homology CDS 1 257 . - 1 ID=cds-TGD42826.1;Parent=gene-C9F07_29355;Dbxref=NCBI_GP:TGD42826.1;Name=TGD42826.1;end_range=257,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455738.1;locus_tag=C9F07_29355;partial=true;product=hypothetical protein;protein_id=TGD42826.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002805.1 1 257 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002805.1 Genbank region 1 257 . + . ID=PYKI01002805.1:1..257;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002805.1 Genbank gene 1 257 . - . ID=gene-C9F07_28075;Name=C9F07_28075;end_range=257,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28075;partial=true;start_range=.,1 PYKI01002805.1 Protein Homology CDS 1 257 . - 1 ID=cds-TGD45784.1;Parent=gene-C9F07_28075;Dbxref=NCBI_GP:TGD45784.1;Name=TGD45784.1;end_range=257,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456848.1;locus_tag=C9F07_28075;partial=true;product=hypothetical protein;protein_id=TGD45784.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001945.1 1 257 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001945.1 Genbank region 1 257 . + . ID=PYKI01001945.1:1..257;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001945.1 Genbank pseudogene 1 194 . + . ID=gene-C9F07_18740;Name=C9F07_18740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18740;pseudo=true PYKI01001945.1 Protein Homology CDS 1 194 . + 2 ID=cds-C9F07_18740;Parent=gene-C9F07_18740;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=C9F07_18740;product=DUF1338 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000153.1 1 257 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000153.1 Genbank region 1 257 . + . ID=PYKI01000153.1:1..257;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000153.1 Genbank pseudogene 1 257 . - . ID=gene-C9F07_01025;Name=C9F07_01025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01025;pseudo=true PYKI01000153.1 Protein Homology CDS 1 257 . - 1 ID=cds-C9F07_01025;Parent=gene-C9F07_01025;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004593457.1;locus_tag=C9F07_01025;product=ribonuclease E;pseudo=true;transl_table=11 ##sequence-region PYKI01000030.1 1 256 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000030.1 Genbank region 1 256 . + . ID=PYKI01000030.1:1..256;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000030.1 Genbank gene 103 256 . - . ID=gene-C9F07_00175;Name=C9F07_00175;end_range=256,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00175;partial=true PYKI01000030.1 Protein Homology CDS 103 256 . - 1 ID=cds-TGE30202.1;Parent=gene-C9F07_00175;Dbxref=NCBI_GP:TGE30202.1;Name=TGE30202.1;end_range=256,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313247.1;locus_tag=C9F07_00175;partial=true;product=hypothetical protein;protein_id=TGE30202.1;transl_table=11 ##sequence-region PYKI01003472.1 1 2788 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003472.1 Genbank region 1 2788 . + . ID=PYKI01003472.1:1..2788;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003472.1 Genbank pseudogene 39 857 . - . ID=gene-C9F07_34915;Name=malS;gbkey=Gene;gene=malS;gene_biotype=pseudogene;locus_tag=C9F07_34915;pseudo=true PYKI01003472.1 Protein Homology CDS 39 857 . - 0 ID=cds-C9F07_34915;Parent=gene-C9F07_34915;Note=periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=malS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=C9F07_34915;product=alpha-amylase;pseudo=true;transl_table=11 PYKI01003472.1 Genbank gene 1173 1997 . + . ID=gene-C9F07_34920;Name=C9F07_34920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34920 PYKI01003472.1 Protein Homology CDS 1173 1997 . + 0 ID=cds-TGD32876.1;Parent=gene-C9F07_34920;Dbxref=NCBI_GP:TGD32876.1;Name=TGD32876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=C9F07_34920;product=hypothetical protein;protein_id=TGD32876.1;transl_table=11 PYKI01003472.1 Genbank gene 2058 2788 . - . ID=gene-C9F07_34925;Name=C9F07_34925;end_range=2788,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34925;partial=true PYKI01003472.1 Protein Homology CDS 2058 2788 . - 2 ID=cds-TGD32877.1;Parent=gene-C9F07_34925;Dbxref=NCBI_GP:TGD32877.1;Name=TGD32877.1;end_range=2788,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458265.1;locus_tag=C9F07_34925;partial=true;product=hypothetical protein;protein_id=TGD32877.1;transl_table=11 ##sequence-region PYKI01002302.1 1 256 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002302.1 Genbank region 1 256 . + . ID=PYKI01002302.1:1..256;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002302.1 Genbank gene 1 256 . - . ID=gene-C9F07_22580;Name=C9F07_22580;end_range=256,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22580;partial=true;start_range=.,1 PYKI01002302.1 Protein Homology CDS 1 256 . - 2 ID=cds-TGD54527.1;Parent=gene-C9F07_22580;Dbxref=NCBI_GP:TGD54527.1;Name=TGD54527.1;end_range=256,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=C9F07_22580;partial=true;product=ABC transporter permease;protein_id=TGD54527.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003187.1 1 256 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003187.1 Genbank region 1 256 . + . ID=PYKI01003187.1:1..256;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003187.1 Genbank gene 1 256 . + . ID=gene-C9F07_31985;Name=C9F07_31985;end_range=256,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31985;partial=true;start_range=.,1 PYKI01003187.1 Protein Homology CDS 1 256 . + 2 ID=cds-TGD37532.1;Parent=gene-C9F07_31985;Dbxref=NCBI_GP:TGD37532.1;Name=TGD37532.1;Note=response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter;end_range=256,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458147.1;locus_tag=C9F07_31985;partial=true;product=transcriptional regulator UhpA;protein_id=TGD37532.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003373.1 1 256 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003373.1 Genbank region 1 256 . + . ID=PYKI01003373.1:1..256;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003373.1 Genbank gene 1 256 . + . ID=gene-C9F07_33980;Name=nepI;end_range=256,.;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;gene_synonym=yicM;locus_tag=C9F07_33980;partial=true;start_range=.,1 PYKI01003373.1 Protein Homology CDS 1 256 . + 1 ID=cds-TGD34450.1;Parent=gene-C9F07_33980;Dbxref=NCBI_GP:TGD34450.1;Name=TGD34450.1;Note=experimental results in Escherichia coli suggest that this gene encodes an inosine export protein%3B member of major facilitator superfamily%3B MFS;end_range=256,.;gbkey=CDS;gene=nepI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458159.1;locus_tag=C9F07_33980;partial=true;product=MFS transporter;protein_id=TGD34450.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000955.1 1 256 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000955.1 Genbank region 1 256 . + . ID=PYKI01000955.1:1..256;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000955.1 Genbank pseudogene 1 204 . + . ID=gene-C9F07_08720;Name=C9F07_08720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08720;pseudo=true PYKI01000955.1 Protein Homology CDS 1 204 . + 0 ID=cds-C9F07_08720;Parent=gene-C9F07_08720;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016158396.1;locus_tag=C9F07_08720;product=tryptophan synthase subunit beta;pseudo=true;transl_table=11 ##sequence-region PYKI01001336.1 1 255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001336.1 Genbank region 1 255 . + . ID=PYKI01001336.1:1..255;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01000205.1 1 255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000205.1 Genbank region 1 255 . + . ID=PYKI01000205.1:1..255;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000205.1 Genbank pseudogene 20 255 . - . ID=gene-C9F07_01370;Name=C9F07_01370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01370;pseudo=true PYKI01000205.1 Protein Homology CDS 20 255 . - 2 ID=cds-C9F07_01370;Parent=gene-C9F07_01370;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456144.1;locus_tag=C9F07_01370;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002469.1 1 2788 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002469.1 Genbank region 1 2788 . + . ID=PYKI01002469.1:1..2788;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002469.1 Genbank pseudogene 118 294 . - . ID=gene-C9F07_24380;Name=C9F07_24380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24380;pseudo=true PYKI01002469.1 Protein Homology CDS 118 294 . - 0 ID=cds-C9F07_24380;Parent=gene-C9F07_24380;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458778.1;locus_tag=C9F07_24380;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002469.1 Genbank gene 405 764 . - . ID=gene-C9F07_24385;Name=C9F07_24385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24385 PYKI01002469.1 Protein Homology CDS 405 764 . - 0 ID=cds-TGD50635.1;Parent=gene-C9F07_24385;Dbxref=NCBI_GP:TGD50635.1;Name=TGD50635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458779.1;locus_tag=C9F07_24385;product=fumarate reductase subunit D;protein_id=TGD50635.1;transl_table=11 PYKI01002469.1 Genbank gene 775 1170 . - . ID=gene-C9F07_24390;Name=C9F07_24390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24390 PYKI01002469.1 Protein Homology CDS 775 1170 . - 0 ID=cds-TGD50636.1;Parent=gene-C9F07_24390;Dbxref=NCBI_GP:TGD50636.1;Name=TGD50636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458780.1;locus_tag=C9F07_24390;product=fumarate reductase subunit C;protein_id=TGD50636.1;transl_table=11 PYKI01002469.1 Genbank gene 1181 1915 . - . ID=gene-C9F07_24395;Name=C9F07_24395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24395 PYKI01002469.1 Protein Homology CDS 1181 1915 . - 0 ID=cds-TGD50637.1;Parent=gene-C9F07_24395;Dbxref=NCBI_GP:TGD50637.1;Name=TGD50637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463206.1;locus_tag=C9F07_24395;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=TGD50637.1;transl_table=11 PYKI01002469.1 Genbank gene 1908 2788 . - . ID=gene-C9F07_24400;Name=C9F07_24400;end_range=2788,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24400;partial=true PYKI01002469.1 Protein Homology CDS 1908 2788 . - 2 ID=cds-TGD50638.1;Parent=gene-C9F07_24400;Dbxref=NCBI_GP:TGD50638.1;Name=TGD50638.1;end_range=2788,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458782.1;locus_tag=C9F07_24400;partial=true;product=hypothetical protein;protein_id=TGD50638.1;transl_table=11 ##sequence-region PYKI01000847.1 1 255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000847.1 Genbank region 1 255 . + . ID=PYKI01000847.1:1..255;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000847.1 Genbank gene 1 255 . - . ID=gene-C9F07_07720;Name=C9F07_07720;end_range=255,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07720;partial=true;start_range=.,1 PYKI01000847.1 Protein Homology CDS 1 255 . - 0 ID=cds-TGE06974.1;Parent=gene-C9F07_07720;Dbxref=NCBI_GP:TGE06974.1;Name=TGE06974.1;end_range=255,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458041.1;locus_tag=C9F07_07720;partial=true;product=translational GTPase TypA;protein_id=TGE06974.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001306.1 1 255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001306.1 Genbank region 1 255 . + . ID=PYKI01001306.1:1..255;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01000268.1 1 255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000268.1 Genbank region 1 255 . + . ID=PYKI01000268.1:1..255;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000268.1 Genbank pseudogene 1 193 . + . ID=gene-C9F07_01740;Name=C9F07_01740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01740;pseudo=true PYKI01000268.1 Protein Homology CDS 1 193 . + 1 ID=cds-C9F07_01740;Parent=gene-C9F07_01740;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=C9F07_01740;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000150.1 1 255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000150.1 Genbank region 1 255 . + . ID=PYKI01000150.1:1..255;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000150.1 Genbank gene 1 255 . - . ID=gene-C9F07_01005;Name=C9F07_01005;end_range=255,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01005;partial=true;start_range=.,1 PYKI01000150.1 Protein Homology CDS 1 255 . - 1 ID=cds-TGE30075.1;Parent=gene-C9F07_01005;Dbxref=NCBI_GP:TGE30075.1;Name=TGE30075.1;end_range=255,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455165.1;locus_tag=C9F07_01005;partial=true;product=enterobactin synthetase subunit F;protein_id=TGE30075.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001419.1 1 254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001419.1 Genbank region 1 254 . + . ID=PYKI01001419.1:1..254;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001419.1 Genbank gene 1 254 . + . ID=gene-C9F07_13455;Name=C9F07_13455;end_range=254,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13455;partial=true;start_range=.,1 PYKI01001419.1 Protein Homology CDS 1 254 . + 1 ID=cds-TGD83746.1;Parent=gene-C9F07_13455;Dbxref=NCBI_GP:TGD83746.1;Name=TGD83746.1;end_range=254,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457649.1;locus_tag=C9F07_13455;partial=true;product=YraN family protein;protein_id=TGD83746.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000039.1 1 254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000039.1 Genbank region 1 254 . + . ID=PYKI01000039.1:1..254;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000039.1 Genbank gene 1 254 . - . ID=gene-C9F07_00220;Name=C9F07_00220;end_range=254,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00220;partial=true;start_range=.,1 PYKI01000039.1 Protein Homology CDS 1 254 . - 1 ID=cds-TGE30198.1;Parent=gene-C9F07_00220;Dbxref=NCBI_GP:TGE30198.1;Name=TGE30198.1;end_range=254,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310458.1;locus_tag=C9F07_00220;partial=true;product=fructosamine kinase family protein;protein_id=TGE30198.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000266.1 1 254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000266.1 Genbank region 1 254 . + . ID=PYKI01000266.1:1..254;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000266.1 Genbank gene 1 254 . - . ID=gene-C9F07_01730;Name=C9F07_01730;end_range=254,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01730;partial=true;start_range=.,1 PYKI01000266.1 Protein Homology CDS 1 254 . - 2 ID=cds-TGE27843.1;Parent=gene-C9F07_01730;Dbxref=NCBI_GP:TGE27843.1;Name=TGE27843.1;end_range=254,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001490315.1;locus_tag=C9F07_01730;partial=true;product=hypothetical protein;protein_id=TGE27843.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002554.1 1 253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002554.1 Genbank region 1 253 . + . ID=PYKI01002554.1:1..253;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002554.1 Genbank gene 1 253 . - . ID=gene-C9F07_25350;Name=C9F07_25350;end_range=253,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25350;partial=true;start_range=.,1 PYKI01002554.1 Protein Homology CDS 1 253 . - 0 ID=cds-TGD49893.1;Parent=gene-C9F07_25350;Dbxref=NCBI_GP:TGD49893.1;Name=TGD49893.1;end_range=253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455258.1;locus_tag=C9F07_25350;partial=true;product=replication initiation regulator SeqA;protein_id=TGD49893.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002544.1 1 2786 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002544.1 Genbank region 1 2786 . + . ID=PYKI01002544.1:1..2786;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002544.1 Genbank gene 276 1580 . - . ID=gene-C9F07_25245;Name=C9F07_25245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25245 PYKI01002544.1 Protein Homology CDS 276 1580 . - 0 ID=cds-TGD49962.1;Parent=gene-C9F07_25245;Dbxref=NCBI_GP:TGD49962.1;Name=TGD49962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455703.1;locus_tag=C9F07_25245;product=FAD-dependent oxidoreductase;protein_id=TGD49962.1;transl_table=11 PYKI01002544.1 Genbank gene 1834 2376 . - . ID=gene-C9F07_25250;Name=C9F07_25250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25250 PYKI01002544.1 Protein Homology CDS 1834 2376 . - 0 ID=cds-TGD49963.1;Parent=gene-C9F07_25250;Dbxref=NCBI_GP:TGD49963.1;Name=TGD49963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=C9F07_25250;product=hypothetical protein;protein_id=TGD49963.1;transl_table=11 PYKI01002544.1 Genbank gene 2401 2786 . - . ID=gene-C9F07_25255;Name=C9F07_25255;end_range=2786,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25255;partial=true PYKI01002544.1 Protein Homology CDS 2401 2786 . - 2 ID=cds-TGD49964.1;Parent=gene-C9F07_25255;Dbxref=NCBI_GP:TGD49964.1;Name=TGD49964.1;Note=hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides;end_range=2786,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455701.1;locus_tag=C9F07_25255;partial=true;product=beta-N-acetylhexosaminidase;protein_id=TGD49964.1;transl_table=11 ##sequence-region PYKI01000032.1 1 253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000032.1 Genbank region 1 253 . + . ID=PYKI01000032.1:1..253;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000032.1 Genbank gene 1 253 . - . ID=gene-C9F07_00185;Name=C9F07_00185;end_range=253,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00185;partial=true;start_range=.,1 PYKI01000032.1 Protein Homology CDS 1 253 . - 1 ID=cds-TGE30201.1;Parent=gene-C9F07_00185;Dbxref=NCBI_GP:TGE30201.1;Name=TGE30201.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;end_range=253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457776.1;locus_tag=C9F07_00185;partial=true;product=twin-arginine translocase subunit TatC;protein_id=TGE30201.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002664.1 1 253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002664.1 Genbank region 1 253 . + . ID=PYKI01002664.1:1..253;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01002883.1 1 253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002883.1 Genbank region 1 253 . + . ID=PYKI01002883.1:1..253;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002883.1 Genbank pseudogene 35 253 . - . ID=gene-C9F07_28870;Name=C9F07_28870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28870;pseudo=true PYKI01002883.1 Protein Homology CDS 35 253 . - 0 ID=cds-C9F07_28870;Parent=gene-C9F07_28870;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000626463.1;locus_tag=C9F07_28870;product=glycosyl transferase;pseudo=true;transl_table=11 ##sequence-region PYKI01003519.1 1 253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003519.1 Genbank region 1 253 . + . ID=PYKI01003519.1:1..253;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003519.1 Genbank gene 1 253 . + . ID=gene-C9F07_35490;Name=mreD;end_range=253,.;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=C9F07_35490;partial=true;start_range=.,1 PYKI01003519.1 Protein Homology CDS 1 253 . + 0 ID=cds-TGD31541.1;Parent=gene-C9F07_35490;Dbxref=NCBI_GP:TGD31541.1;Name=TGD31541.1;end_range=253,.;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457748.1;locus_tag=C9F07_35490;partial=true;product=rod shape-determining protein MreD;protein_id=TGD31541.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001734.1 1 253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001734.1 Genbank region 1 253 . + . ID=PYKI01001734.1:1..253;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001734.1 Genbank gene 129 253 . - . ID=gene-C9F07_16585;Name=C9F07_16585;end_range=253,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16585;partial=true PYKI01001734.1 Protein Homology CDS 129 253 . - 2 ID=cds-TGD68675.1;Parent=gene-C9F07_16585;Dbxref=NCBI_GP:TGD68675.1;Name=TGD68675.1;end_range=253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001047120.1;locus_tag=C9F07_16585;partial=true;product=antitermination protein;protein_id=TGD68675.1;transl_table=11 ##sequence-region PYKI01002779.1 1 253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002779.1 Genbank region 1 253 . + . ID=PYKI01002779.1:1..253;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002779.1 Genbank gene 1 253 . + . ID=gene-C9F07_27755;Name=C9F07_27755;end_range=253,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27755;partial=true;start_range=.,1 PYKI01002779.1 Protein Homology CDS 1 253 . + 0 ID=cds-TGD46315.1;Parent=gene-C9F07_27755;Dbxref=NCBI_GP:TGD46315.1;Name=TGD46315.1;Note=catalyzes the formation of asparagine from aspartate and ammonia;end_range=253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=C9F07_27755;partial=true;product=asparagine synthetase A;protein_id=TGD46315.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001988.1 1 253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001988.1 Genbank region 1 253 . + . ID=PYKI01001988.1:1..253;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001988.1 Genbank pseudogene 74 253 . - . ID=gene-C9F07_19175;Name=C9F07_19175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19175;pseudo=true PYKI01001988.1 Protein Homology CDS 74 253 . - 0 ID=cds-C9F07_19175;Parent=gene-C9F07_19175;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=C9F07_19175;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;pseudo=true;transl_table=11 ##sequence-region PYKI01000008.1 1 253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000008.1 Genbank region 1 253 . + . ID=PYKI01000008.1:1..253;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000008.1 Genbank gene 1 253 . + . ID=gene-C9F07_00045;Name=mazG;end_range=253,.;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=C9F07_00045;partial=true;start_range=.,1 PYKI01000008.1 Protein Homology CDS 1 253 . + 2 ID=cds-TGE30221.1;Parent=gene-C9F07_00045;Dbxref=NCBI_GP:TGE30221.1;Name=TGE30221.1;Note=functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era;end_range=253,.;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=C9F07_00045;partial=true;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=TGE30221.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003089.1 1 252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003089.1 Genbank region 1 252 . + . ID=PYKI01003089.1:1..252;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003089.1 Genbank gene 1 252 . - . ID=gene-C9F07_30920;Name=C9F07_30920;end_range=252,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30920;partial=true;start_range=.,1 PYKI01003089.1 Protein Homology CDS 1 252 . - 2 ID=cds-TGD40080.1;Parent=gene-C9F07_30920;Dbxref=NCBI_GP:TGD40080.1;Name=TGD40080.1;end_range=252,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457307.1;locus_tag=C9F07_30920;partial=true;product=hypothetical protein;protein_id=TGD40080.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003143.1 1 5894 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003143.1 Genbank region 1 5894 . + . ID=PYKI01003143.1:1..5894;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003143.1 Genbank gene 1 178 . - . ID=gene-C9F07_31460;Name=C9F07_31460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31460;partial=true;start_range=.,1 PYKI01003143.1 Protein Homology CDS 1 178 . - 0 ID=cds-TGD38708.1;Parent=gene-C9F07_31460;Dbxref=NCBI_GP:TGD38708.1;Name=TGD38708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=C9F07_31460;partial=true;product=EamA family transporter;protein_id=TGD38708.1;start_range=.,1;transl_table=11 PYKI01003143.1 Genbank pseudogene 308 565 . - . ID=gene-C9F07_31465;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=pseudogene;locus_tag=C9F07_31465;pseudo=true PYKI01003143.1 Protein Homology CDS 308 565 . - 0 ID=cds-C9F07_31465;Parent=gene-C9F07_31465;Note=internal stop;gbkey=CDS;gene=rpmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007369914.1;locus_tag=C9F07_31465;product=50S ribosomal protein L27;pseudo=true;transl_table=11 PYKI01003143.1 Genbank gene 585 896 . - . ID=gene-C9F07_31470;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=C9F07_31470 PYKI01003143.1 Protein Homology CDS 585 896 . - 0 ID=cds-TGD38709.1;Parent=gene-C9F07_31470;Dbxref=NCBI_GP:TGD38709.1;Name=TGD38709.1;gbkey=CDS;gene=rplU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=C9F07_31470;product=50S ribosomal protein L21;protein_id=TGD38709.1;transl_table=11 PYKI01003143.1 Genbank gene 1154 2125 . + . ID=gene-C9F07_31475;Name=C9F07_31475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31475 PYKI01003143.1 Protein Homology CDS 1154 2125 . + 0 ID=cds-TGD38716.1;Parent=gene-C9F07_31475;Dbxref=NCBI_GP:TGD38716.1;Name=TGD38716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457684.1;locus_tag=C9F07_31475;product=octaprenyl diphosphate synthase;protein_id=TGD38716.1;transl_table=11 PYKI01003143.1 Genbank gene 2358 2645 . + . ID=gene-C9F07_31480;Name=C9F07_31480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31480 PYKI01003143.1 Protein Homology CDS 2358 2645 . + 0 ID=cds-TGD38710.1;Parent=gene-C9F07_31480;Dbxref=NCBI_GP:TGD38710.1;Name=TGD38710.1;Note=activator of maltose metabolism genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=C9F07_31480;product=transcriptional regulator;protein_id=TGD38710.1;transl_table=11 PYKI01003143.1 Genbank gene 2703 3962 . - . ID=gene-C9F07_31485;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=C9F07_31485 PYKI01003143.1 Protein Homology CDS 2703 3962 . - 0 ID=cds-TGD38711.1;Parent=gene-C9F07_31485;Dbxref=NCBI_GP:TGD38711.1;Name=TGD38711.1;gbkey=CDS;gene=murA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457686.1;locus_tag=C9F07_31485;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=TGD38711.1;transl_table=11 PYKI01003143.1 Genbank gene 4016 4309 . - . ID=gene-C9F07_31490;Name=C9F07_31490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31490 PYKI01003143.1 Protein Homology CDS 4016 4309 . - 0 ID=cds-TGD38712.1;Parent=gene-C9F07_31490;Dbxref=NCBI_GP:TGD38712.1;Name=TGD38712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457687.1;locus_tag=C9F07_31490;product=hypothetical protein;protein_id=TGD38712.1;transl_table=11 PYKI01003143.1 Genbank gene 4458 4754 . - . ID=gene-C9F07_31495;Name=C9F07_31495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31495 PYKI01003143.1 Protein Homology CDS 4458 4754 . - 0 ID=cds-TGD38713.1;Parent=gene-C9F07_31495;Dbxref=NCBI_GP:TGD38713.1;Name=TGD38713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457688.1;locus_tag=C9F07_31495;product=phospholipid ABC transporter substrate-binding protein;protein_id=TGD38713.1;transl_table=11 PYKI01003143.1 Genbank gene 4754 5389 . - . ID=gene-C9F07_31500;Name=C9F07_31500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31500 PYKI01003143.1 Protein Homology CDS 4754 5389 . - 0 ID=cds-TGD38714.1;Parent=gene-C9F07_31500;Dbxref=NCBI_GP:TGD38714.1;Name=TGD38714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457689.1;locus_tag=C9F07_31500;product=phospholipid-binding protein MlaC;protein_id=TGD38714.1;transl_table=11 PYKI01003143.1 Genbank gene 5408 5890 . - . ID=gene-C9F07_31505;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=C9F07_31505 PYKI01003143.1 Protein Homology CDS 5408 5890 . - 0 ID=cds-TGD38715.1;Parent=gene-C9F07_31505;Dbxref=NCBI_GP:TGD38715.1;Name=TGD38715.1;gbkey=CDS;gene=mlaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121317.1;locus_tag=C9F07_31505;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=TGD38715.1;transl_table=11 ##sequence-region PYKI01000044.1 1 252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000044.1 Genbank region 1 252 . + . ID=PYKI01000044.1:1..252;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000044.1 Genbank gene 1 235 . - . ID=gene-C9F07_00245;Name=C9F07_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00245;partial=true;start_range=.,1 PYKI01000044.1 Protein Homology CDS 1 235 . - 0 ID=cds-TGE30194.1;Parent=gene-C9F07_00245;Dbxref=NCBI_GP:TGE30194.1;Name=TGE30194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456909.1;locus_tag=C9F07_00245;partial=true;product=hypothetical protein;protein_id=TGE30194.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002812.1 1 252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002812.1 Genbank region 1 252 . + . ID=PYKI01002812.1:1..252;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002812.1 Genbank gene 1 145 . - . ID=gene-C9F07_28165;Name=C9F07_28165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28165;partial=true;start_range=.,1 PYKI01002812.1 Protein Homology CDS 1 145 . - 0 ID=cds-TGD45726.1;Parent=gene-C9F07_28165;Dbxref=NCBI_GP:TGD45726.1;Name=TGD45726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458503.1;locus_tag=C9F07_28165;partial=true;product=malate synthase;protein_id=TGD45726.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001823.1 1 252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001823.1 Genbank region 1 252 . + . ID=PYKI01001823.1:1..252;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001823.1 Genbank gene 1 252 . + . ID=gene-C9F07_17535;Name=C9F07_17535;end_range=252,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17535;partial=true;start_range=.,1 PYKI01001823.1 Protein Homology CDS 1 252 . + 0 ID=cds-TGD64371.1;Parent=gene-C9F07_17535;Dbxref=NCBI_GP:TGD64371.1;Name=TGD64371.1;end_range=252,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=C9F07_17535;partial=true;product=hypothetical protein;protein_id=TGD64371.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003552.1 1 252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003552.1 Genbank region 1 252 . + . ID=PYKI01003552.1:1..252;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003552.1 Genbank gene 3 252 . + . ID=gene-C9F07_35870;Name=C9F07_35870;end_range=252,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35870;partial=true PYKI01003552.1 Protein Homology CDS 3 252 . + 0 ID=cds-TGD30711.1;Parent=gene-C9F07_35870;Dbxref=NCBI_GP:TGD30711.1;Name=TGD30711.1;Note=highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein;end_range=252,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210649.1;locus_tag=C9F07_35870;partial=true;product=dsDNA-mimic protein;protein_id=TGD30711.1;transl_table=11 ##sequence-region PYKI01000198.1 1 252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000198.1 Genbank region 1 252 . + . ID=PYKI01000198.1:1..252;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000198.1 Genbank gene 1 252 . - . ID=gene-C9F07_01330;Name=C9F07_01330;end_range=252,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01330;partial=true;start_range=.,1 PYKI01000198.1 Protein Homology CDS 1 252 . - 2 ID=cds-TGE30028.1;Parent=gene-C9F07_01330;Dbxref=NCBI_GP:TGE30028.1;Name=TGE30028.1;end_range=252,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454668.1;locus_tag=C9F07_01330;partial=true;product=citrate:sodium symporter;protein_id=TGE30028.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002885.1 1 252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002885.1 Genbank region 1 252 . + . ID=PYKI01002885.1:1..252;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002885.1 Genbank pseudogene 1 209 . + . ID=gene-C9F07_28885;Name=C9F07_28885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28885;pseudo=true PYKI01002885.1 Protein Homology CDS 1 209 . + 2 ID=cds-C9F07_28885;Parent=gene-C9F07_28885;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456868.1;locus_tag=C9F07_28885;product=NADH-quinone oxidoreductase subunit C/D;pseudo=true;transl_table=11 ##sequence-region PYKI01000297.1 1 252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000297.1 Genbank region 1 252 . + . ID=PYKI01000297.1:1..252;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000297.1 Genbank gene 1 252 . + . ID=gene-C9F07_01960;Name=C9F07_01960;end_range=252,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01960;partial=true;start_range=.,1 PYKI01000297.1 Protein Homology CDS 1 252 . + 0 ID=cds-TGE27805.1;Parent=gene-C9F07_01960;Dbxref=NCBI_GP:TGE27805.1;Name=TGE27805.1;end_range=252,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456590.1;locus_tag=C9F07_01960;partial=true;product=propanediol dehydratase;protein_id=TGE27805.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000117.1 1 252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000117.1 Genbank region 1 252 . + . ID=PYKI01000117.1:1..252;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000117.1 Genbank gene 67 252 . + . ID=gene-C9F07_00800;Name=C9F07_00800;end_range=252,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00800;partial=true PYKI01000117.1 GeneMarkS+ CDS 67 252 . + 0 ID=cds-TGE30107.1;Parent=gene-C9F07_00800;Dbxref=NCBI_GP:TGE30107.1;Name=TGE30107.1;end_range=252,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F07_00800;partial=true;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=TGE30107.1;transl_table=11 ##sequence-region PYKI01001922.1 1 2776 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001922.1 Genbank region 1 2776 . + . ID=PYKI01001922.1:1..2776;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001922.1 Genbank gene 183 2582 . - . ID=gene-C9F07_18515;Name=C9F07_18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18515 PYKI01001922.1 Protein Homology CDS 183 2582 . - 0 ID=cds-TGD61020.1;Parent=gene-C9F07_18515;Dbxref=NCBI_GP:TGD61020.1;Name=TGD61020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463170.3;locus_tag=C9F07_18515;product=dimethyl sulfoxide reductase subunit A;protein_id=TGD61020.1;transl_table=11 ##sequence-region PYKI01003571.1 1 252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003571.1 Genbank region 1 252 . + . ID=PYKI01003571.1:1..252;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003571.1 Genbank gene 1 252 . - . ID=gene-C9F07_36055;Name=C9F07_36055;end_range=252,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36055;partial=true;start_range=.,1 PYKI01003571.1 Protein Homology CDS 1 252 . - 1 ID=cds-TGD30242.1;Parent=gene-C9F07_36055;Dbxref=NCBI_GP:TGD30242.1;Name=TGD30242.1;end_range=252,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458559.1;locus_tag=C9F07_36055;partial=true;product=hypothetical protein;protein_id=TGD30242.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002816.1 1 252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002816.1 Genbank region 1 252 . + . ID=PYKI01002816.1:1..252;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002816.1 Genbank gene 1 252 . + . ID=gene-C9F07_28195;Name=C9F07_28195;end_range=252,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28195;partial=true;start_range=.,1 PYKI01002816.1 Protein Homology CDS 1 252 . + 0 ID=cds-TGD45703.1;Parent=gene-C9F07_28195;Dbxref=NCBI_GP:TGD45703.1;Name=TGD45703.1;end_range=252,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456241.1;locus_tag=C9F07_28195;partial=true;product=leucine efflux protein LeuE;protein_id=TGD45703.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001401.1 1 251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001401.1 Genbank region 1 251 . + . ID=PYKI01001401.1:1..251;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001401.1 Genbank gene 1 251 . + . ID=gene-C9F07_13270;Name=C9F07_13270;end_range=251,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13270;partial=true;start_range=.,1 PYKI01001401.1 Protein Homology CDS 1 251 . + 0 ID=cds-TGD83969.1;Parent=gene-C9F07_13270;Dbxref=NCBI_GP:TGD83969.1;Name=TGD83969.1;end_range=251,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455980.1;locus_tag=C9F07_13270;partial=true;product=dimethyl sulfoxide reductase subunit A;protein_id=TGD83969.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000919.1 1 251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000919.1 Genbank region 1 251 . + . ID=PYKI01000919.1:1..251;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000919.1 Genbank pseudogene 78 251 . + . ID=gene-C9F07_08385;Name=treR;gbkey=Gene;gene=treR;gene_biotype=pseudogene;locus_tag=C9F07_08385;pseudo=true PYKI01000919.1 Protein Homology CDS 78 251 . + 0 ID=cds-C9F07_08385;Parent=gene-C9F07_08385;Note=regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon%3B frameshifted%3B incomplete%3B missing stop;gbkey=CDS;gene=treR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663341.1;locus_tag=C9F07_08385;product=trehalose operon repressor;pseudo=true;transl_table=11 ##sequence-region PYKI01001617.1 1 251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001617.1 Genbank region 1 251 . + . ID=PYKI01001617.1:1..251;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001617.1 Genbank gene 1 251 . - . ID=gene-C9F07_15420;Name=C9F07_15420;end_range=251,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15420;partial=true;start_range=.,1 PYKI01001617.1 Protein Homology CDS 1 251 . - 1 ID=cds-TGD70750.1;Parent=gene-C9F07_15420;Dbxref=NCBI_GP:TGD70750.1;Name=TGD70750.1;end_range=251,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456324.1;locus_tag=C9F07_15420;partial=true;product=ribonuclease D;protein_id=TGD70750.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000194.1 1 251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000194.1 Genbank region 1 251 . + . ID=PYKI01000194.1:1..251;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000194.1 Genbank gene 55 251 . - . ID=gene-C9F07_01310;Name=C9F07_01310;end_range=251,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01310;partial=true PYKI01000194.1 Protein Homology CDS 55 251 . - 2 ID=cds-TGE30032.1;Parent=gene-C9F07_01310;Dbxref=NCBI_GP:TGE30032.1;Name=TGE30032.1;end_range=251,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344044.1;locus_tag=C9F07_01310;partial=true;product=hypothetical protein;protein_id=TGE30032.1;transl_table=11 ##sequence-region PYKI01002880.1 1 250 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002880.1 Genbank region 1 250 . + . ID=PYKI01002880.1:1..250;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002880.1 Genbank pseudogene 1 222 . - . ID=gene-C9F07_28845;Name=C9F07_28845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28845;pseudo=true PYKI01002880.1 Protein Homology CDS 1 222 . - 0 ID=cds-C9F07_28845;Parent=gene-C9F07_28845;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005294830.1;locus_tag=C9F07_28845;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000945.1 1 250 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000945.1 Genbank region 1 250 . + . ID=PYKI01000945.1:1..250;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000945.1 Genbank pseudogene 66 215 . - . ID=gene-C9F07_08610;Name=C9F07_08610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08610;pseudo=true PYKI01000945.1 Protein Homology CDS 66 215 . - 0 ID=cds-C9F07_08610;Parent=gene-C9F07_08610;Note=catalyzes the formation of arginine from (N-L-arginino)succinate%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457936.1;locus_tag=C9F07_08610;product=argininosuccinate lyase;pseudo=true;transl_table=11 ##sequence-region PYKI01000208.1 1 250 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000208.1 Genbank region 1 250 . + . ID=PYKI01000208.1:1..250;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000208.1 Genbank gene 30 250 . + . ID=gene-C9F07_01380;Name=C9F07_01380;end_range=250,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01380;partial=true PYKI01000208.1 Protein Homology CDS 30 250 . + 0 ID=cds-TGE30021.1;Parent=gene-C9F07_01380;Dbxref=NCBI_GP:TGE30021.1;Name=TGE30021.1;end_range=250,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001430286.1;locus_tag=C9F07_01380;partial=true;product=hypothetical protein;protein_id=TGE30021.1;transl_table=11 ##sequence-region PYKI01001047.1 1 2776 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001047.1 Genbank region 1 2776 . + . ID=PYKI01001047.1:1..2776;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001047.1 Genbank gene 1 2001 . + . ID=gene-C9F07_09665;Name=clpV;gbkey=Gene;gene=clpV;gene_biotype=protein_coding;locus_tag=C9F07_09665;partial=true;start_range=.,1 PYKI01001047.1 Protein Homology CDS 1 2001 . + 0 ID=cds-TGD96537.1;Parent=gene-C9F07_09665;Dbxref=NCBI_GP:TGD96537.1;Name=TGD96537.1;gbkey=CDS;gene=clpV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454876.1;locus_tag=C9F07_09665;partial=true;product=type VI secretion system ATPase TssH;protein_id=TGD96537.1;start_range=.,1;transl_table=11 PYKI01001047.1 Genbank gene 2060 2350 . + . ID=gene-C9F07_09670;Name=C9F07_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09670 PYKI01001047.1 Protein Homology CDS 2060 2350 . + 0 ID=cds-TGD96538.1;Parent=gene-C9F07_09670;Dbxref=NCBI_GP:TGD96538.1;Name=TGD96538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175185.1;locus_tag=C9F07_09670;product=hypothetical protein;protein_id=TGD96538.1;transl_table=11 PYKI01001047.1 Genbank gene 2412 2776 . + . ID=gene-C9F07_09675;Name=tssB;end_range=2776,.;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=C9F07_09675;partial=true PYKI01001047.1 Protein Homology CDS 2412 2776 . + 0 ID=cds-TGD96539.1;Parent=gene-C9F07_09675;Dbxref=NCBI_GP:TGD96539.1;Name=TGD96539.1;end_range=2776,.;gbkey=CDS;gene=tssB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454879.1;locus_tag=C9F07_09675;partial=true;product=type VI secretion system contractile sheath small subunit;protein_id=TGD96539.1;transl_table=11 ##sequence-region PYKI01000592.1 1 250 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000592.1 Genbank region 1 250 . + . ID=PYKI01000592.1:1..250;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000592.1 Genbank pseudogene 66 250 . - . ID=gene-C9F07_05065;Name=C9F07_05065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05065;pseudo=true PYKI01000592.1 Protein Homology CDS 66 250 . - 2 ID=cds-C9F07_05065;Parent=gene-C9F07_05065;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=C9F07_05065;product=D-hexose-6-phosphate mutarotase;pseudo=true;transl_table=11 ##sequence-region PYKI01003252.1 1 250 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003252.1 Genbank region 1 250 . + . ID=PYKI01003252.1:1..250;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003252.1 Genbank pseudogene 15 250 . + . ID=gene-C9F07_32725;Name=C9F07_32725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32725;pseudo=true PYKI01003252.1 Protein Homology CDS 15 250 . + 0 ID=cds-C9F07_32725;Parent=gene-C9F07_32725;Note=Required for the expression of anaerobic nitric oxide (NO) reductase%3B acts as a transcriptional activator for the norVW operon%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457233.1;locus_tag=C9F07_32725;product=nitric oxide reductase transcription regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01003206.1 1 250 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003206.1 Genbank region 1 250 . + . ID=PYKI01003206.1:1..250;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003206.1 Genbank pseudogene 1 233 . + . ID=gene-C9F07_32240;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=pseudogene;locus_tag=C9F07_32240;pseudo=true PYKI01003206.1 Protein Homology CDS 1 233 . + 2 ID=cds-C9F07_32240;Parent=gene-C9F07_32240;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=prfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=C9F07_32240;product=peptide chain release factor 1;pseudo=true;transl_table=11 ##sequence-region PYKI01003405.1 1 249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003405.1 Genbank region 1 249 . + . ID=PYKI01003405.1:1..249;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003405.1 Genbank gene 1 126 . + . ID=gene-C9F07_34230;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=C9F07_34230;partial=true;start_range=.,1 PYKI01003405.1 Protein Homology CDS 1 126 . + 0 ID=cds-TGD33905.1;Parent=gene-C9F07_34230;Dbxref=NCBI_GP:TGD33905.1;Name=TGD33905.1;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;gbkey=CDS;gene=mepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456924.1;locus_tag=C9F07_34230;partial=true;product=penicillin-insensitive murein endopeptidase;protein_id=TGD33905.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003544.1 1 249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003544.1 Genbank region 1 249 . + . ID=PYKI01003544.1:1..249;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003544.1 Genbank pseudogene 56 249 . - . ID=gene-C9F07_35775;Name=C9F07_35775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35775;pseudo=true PYKI01003544.1 Protein Homology CDS 56 249 . - 2 ID=cds-C9F07_35775;Parent=gene-C9F07_35775;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=C9F07_35775;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003210.1 1 249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003210.1 Genbank region 1 249 . + . ID=PYKI01003210.1:1..249;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003210.1 Genbank gene 23 249 . + . ID=gene-C9F07_32285;Name=C9F07_32285;end_range=249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32285;partial=true PYKI01003210.1 Protein Homology CDS 23 249 . + 0 ID=cds-TGD37016.1;Parent=gene-C9F07_32285;Dbxref=NCBI_GP:TGD37016.1;Name=TGD37016.1;end_range=249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=C9F07_32285;partial=true;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=TGD37016.1;transl_table=11 ##sequence-region PYKI01001045.1 1 249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001045.1 Genbank region 1 249 . + . ID=PYKI01001045.1:1..249;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001045.1 Genbank gene 1 249 . - . ID=gene-C9F07_09655;Name=C9F07_09655;end_range=249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09655;partial=true;start_range=.,1 PYKI01001045.1 Protein Homology CDS 1 249 . - 2 ID=cds-TGD96676.1;Parent=gene-C9F07_09655;Dbxref=NCBI_GP:TGD96676.1;Name=TGD96676.1;end_range=249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455426.1;locus_tag=C9F07_09655;partial=true;product=NADH oxidoreductase;protein_id=TGD96676.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003133.1 1 2774 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003133.1 Genbank region 1 2774 . + . ID=PYKI01003133.1:1..2774;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003133.1 Genbank gene 254 859 . + . ID=gene-C9F07_31375;Name=C9F07_31375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31375 PYKI01003133.1 Protein Homology CDS 254 859 . + 0 ID=cds-TGD38938.1;Parent=gene-C9F07_31375;Dbxref=NCBI_GP:TGD38938.1;Name=TGD38938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=C9F07_31375;product=glutathione transferase GstA;protein_id=TGD38938.1;transl_table=11 PYKI01003133.1 Genbank gene 918 1778 . - . ID=gene-C9F07_31380;Name=C9F07_31380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31380 PYKI01003133.1 Protein Homology CDS 918 1778 . - 0 ID=cds-TGD38939.1;Parent=gene-C9F07_31380;Dbxref=NCBI_GP:TGD38939.1;Name=TGD38939.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=C9F07_31380;product=pyridoxal kinase;protein_id=TGD38939.1;transl_table=11 PYKI01003133.1 Genbank gene 1838 2774 . - . ID=gene-C9F07_31385;Name=C9F07_31385;end_range=2774,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31385;partial=true PYKI01003133.1 Protein Homology CDS 1838 2774 . - 1 ID=cds-TGD38940.1;Parent=gene-C9F07_31385;Dbxref=NCBI_GP:TGD38940.1;Name=TGD38940.1;end_range=2774,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456081.1;locus_tag=C9F07_31385;partial=true;product=tyrosine--tRNA ligase;protein_id=TGD38940.1;transl_table=11 ##sequence-region PYKI01000896.1 1 249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000896.1 Genbank region 1 249 . + . ID=PYKI01000896.1:1..249;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000896.1 Genbank pseudogene 1 198 . + . ID=gene-C9F07_08205;Name=C9F07_08205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08205;pseudo=true PYKI01000896.1 Protein Homology CDS 1 198 . + 0 ID=cds-C9F07_08205;Parent=gene-C9F07_08205;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=C9F07_08205;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002560.1 1 249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002560.1 Genbank region 1 249 . + . ID=PYKI01002560.1:1..249;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002560.1 Genbank gene 1 249 . + . ID=gene-C9F07_25425;Name=C9F07_25425;end_range=249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25425;partial=true;start_range=.,1 PYKI01002560.1 Protein Homology CDS 1 249 . + 0 ID=cds-TGD49864.1;Parent=gene-C9F07_25425;Dbxref=NCBI_GP:TGD49864.1;Name=TGD49864.1;end_range=249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456095.1;locus_tag=C9F07_25425;partial=true;product=hypothetical protein;protein_id=TGD49864.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001657.1 1 249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001657.1 Genbank region 1 249 . + . ID=PYKI01001657.1:1..249;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001657.1 Genbank gene 1 249 . - . ID=gene-C9F07_15815;Name=C9F07_15815;end_range=249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15815;partial=true;start_range=.,1 PYKI01001657.1 Protein Homology CDS 1 249 . - 2 ID=cds-TGD70199.1;Parent=gene-C9F07_15815;Dbxref=NCBI_GP:TGD70199.1;Name=TGD70199.1;end_range=249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=C9F07_15815;partial=true;product=serine hydroxymethyltransferase;protein_id=TGD70199.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002730.1 1 249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002730.1 Genbank region 1 249 . + . ID=PYKI01002730.1:1..249;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002730.1 Genbank gene 1 249 . - . ID=gene-C9F07_27245;Name=C9F07_27245;end_range=249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27245;partial=true;start_range=.,1 PYKI01002730.1 Protein Homology CDS 1 249 . - 1 ID=cds-TGD47403.1;Parent=gene-C9F07_27245;Dbxref=NCBI_GP:TGD47403.1;Name=TGD47403.1;end_range=249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310616.1;locus_tag=C9F07_27245;partial=true;product=hypothetical protein;protein_id=TGD47403.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000816.1 1 248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000816.1 Genbank region 1 248 . + . ID=PYKI01000816.1:1..248;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000816.1 Genbank gene 51 248 . - . ID=gene-C9F07_07390;Name=C9F07_07390;end_range=248,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07390;partial=true PYKI01000816.1 Protein Homology CDS 51 248 . - 0 ID=cds-TGE07513.1;Parent=gene-C9F07_07390;Dbxref=NCBI_GP:TGE07513.1;Name=TGE07513.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;end_range=248,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=C9F07_07390;partial=true;product=glutamine--fructose-6-phosphate aminotransferase;protein_id=TGE07513.1;transl_table=11 ##sequence-region PYKI01000144.1 1 248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000144.1 Genbank region 1 248 . + . ID=PYKI01000144.1:1..248;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000144.1 Genbank gene 1 248 . - . ID=gene-C9F07_00975;Name=C9F07_00975;end_range=248,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00975;partial=true;start_range=.,1 PYKI01000144.1 Protein Homology CDS 1 248 . - 0 ID=cds-TGE30079.1;Parent=gene-C9F07_00975;Dbxref=NCBI_GP:TGE30079.1;Name=TGE30079.1;end_range=248,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455561.1;locus_tag=C9F07_00975;partial=true;product=paraquat-inducible protein A;protein_id=TGE30079.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000053.1 1 248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000053.1 Genbank region 1 248 . + . ID=PYKI01000053.1:1..248;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000053.1 Genbank pseudogene 50 248 . - . ID=gene-C9F07_00320;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=pseudogene;locus_tag=C9F07_00320;pseudo=true PYKI01000053.1 Protein Homology CDS 50 248 . - 1 ID=cds-C9F07_00320;Parent=gene-C9F07_00320;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=flgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455674.1;locus_tag=C9F07_00320;product=flagellar biosynthesis protein FlgA;pseudo=true;transl_table=11 ##sequence-region PYKI01003450.1 1 248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003450.1 Genbank region 1 248 . + . ID=PYKI01003450.1:1..248;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003450.1 Genbank gene 1 248 . + . ID=gene-C9F07_34680;Name=C9F07_34680;end_range=248,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34680;partial=true;start_range=.,1 PYKI01003450.1 Protein Homology CDS 1 248 . + 1 ID=cds-TGD33399.1;Parent=gene-C9F07_34680;Dbxref=NCBI_GP:TGD33399.1;Name=TGD33399.1;end_range=248,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457592.1;locus_tag=C9F07_34680;partial=true;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=TGD33399.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002797.1 1 2767 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002797.1 Genbank region 1 2767 . + . ID=PYKI01002797.1:1..2767;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002797.1 Genbank gene 1 838 . + . ID=gene-C9F07_27960;Name=C9F07_27960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27960;partial=true;start_range=.,1 PYKI01002797.1 Protein Homology CDS 1 838 . + 1 ID=cds-TGD45950.1;Parent=gene-C9F07_27960;Dbxref=NCBI_GP:TGD45950.1;Name=TGD45950.1;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455460.1;locus_tag=C9F07_27960;partial=true;product=formate acetyltransferase;protein_id=TGD45950.1;start_range=.,1;transl_table=11 PYKI01002797.1 Genbank gene 910 1869 . - . ID=gene-C9F07_27965;Name=C9F07_27965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27965 PYKI01002797.1 Protein Homology CDS 910 1869 . - 0 ID=cds-TGD45951.1;Parent=gene-C9F07_27965;Dbxref=NCBI_GP:TGD45951.1;Name=TGD45951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459947.1;locus_tag=C9F07_27965;product=type III secretion system effector SopD2;protein_id=TGD45951.1;transl_table=11 PYKI01002797.1 Genbank gene 2418 2767 . + . ID=gene-C9F07_27970;Name=pflA;end_range=2767,.;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=C9F07_27970;partial=true PYKI01002797.1 Protein Homology CDS 2418 2767 . + 0 ID=cds-TGD45952.1;Parent=gene-C9F07_27970;Dbxref=NCBI_GP:TGD45952.1;Name=TGD45952.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;end_range=2767,.;gbkey=CDS;gene=pflA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459945.3;locus_tag=C9F07_27970;partial=true;product=pyruvate formate lyase-activating protein;protein_id=TGD45952.1;transl_table=11 ##sequence-region PYKI01000667.1 1 247 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000667.1 Genbank region 1 247 . + . ID=PYKI01000667.1:1..247;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000667.1 Genbank pseudogene 1 175 . + . ID=gene-C9F07_05820;Name=C9F07_05820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05820;pseudo=true PYKI01000667.1 Protein Homology CDS 1 175 . + 1 ID=cds-C9F07_05820;Parent=gene-C9F07_05820;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312864.1;locus_tag=C9F07_05820;product=two-component system sensor histidine kinase CpxA;pseudo=true;transl_table=11 ##sequence-region PYKI01000118.1 1 247 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000118.1 Genbank region 1 247 . + . ID=PYKI01000118.1:1..247;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01003177.1 1 247 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003177.1 Genbank region 1 247 . + . ID=PYKI01003177.1:1..247;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003177.1 Genbank gene 1 247 . + . ID=gene-C9F07_31865;Name=C9F07_31865;end_range=247,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31865;partial=true;start_range=.,1 PYKI01003177.1 Protein Homology CDS 1 247 . + 0 ID=cds-TGD37817.1;Parent=gene-C9F07_31865;Dbxref=NCBI_GP:TGD37817.1;Name=TGD37817.1;end_range=247,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=C9F07_31865;partial=true;product=hypothetical protein;protein_id=TGD37817.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000480.1 1 247 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000480.1 Genbank region 1 247 . + . ID=PYKI01000480.1:1..247;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000480.1 Genbank pseudogene 1 161 . + . ID=gene-C9F07_03845;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=pseudogene;locus_tag=C9F07_03845;pseudo=true PYKI01000480.1 Protein Homology CDS 1 161 . + 2 ID=cds-C9F07_03845;Parent=gene-C9F07_03845;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=mglC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=C9F07_03845;product=beta-methylgalactoside transporter permease;pseudo=true;transl_table=11 ##sequence-region PYKI01000002.1 1 247 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000002.1 Genbank region 1 247 . + . ID=PYKI01000002.1:1..247;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000002.1 Genbank gene 5 89 . + . ID=gene-C9F07_00010;Name=C9F07_00010;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_00010 PYKI01000002.1 tRNAscan-SE tRNA 5 89 . + . ID=rna-C9F07_00010;Parent=gene-C9F07_00010;anticodon=(pos:39..41);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_00010;product=tRNA-Tyr PYKI01000002.1 tRNAscan-SE exon 5 89 . + . ID=exon-C9F07_00010-1;Parent=rna-C9F07_00010;anticodon=(pos:39..41);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_00010;product=tRNA-Tyr PYKI01000002.1 Genbank gene 134 247 . + . ID=gene-C9F07_00015;Name=C9F07_00015;end_range=247,.;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F07_00015;partial=true PYKI01000002.1 cmsearch ncRNA 134 247 . + . ID=rna-C9F07_00015;Parent=gene-C9F07_00015;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;end_range=247,.;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_00015;partial=true;product=RtT sRNA PYKI01000002.1 cmsearch exon 134 247 . + . ID=exon-C9F07_00015-1;Parent=rna-C9F07_00015;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;end_range=247,.;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_00015;partial=true;product=RtT sRNA ##sequence-region PYKI01000665.1 1 247 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000665.1 Genbank region 1 247 . + . ID=PYKI01000665.1:1..247;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000665.1 Genbank pseudogene 1 180 . - . ID=gene-C9F07_05810;Name=C9F07_05810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05810;pseudo=true PYKI01000665.1 Protein Homology CDS 1 180 . - 0 ID=cds-C9F07_05810;Parent=gene-C9F07_05810;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455480.1;locus_tag=C9F07_05810;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001340.1 1 247 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001340.1 Genbank region 1 247 . + . ID=PYKI01001340.1:1..247;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001340.1 Genbank pseudogene 24 232 . + . ID=gene-C9F07_12500;Name=C9F07_12500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12500;pseudo=true PYKI01001340.1 Protein Homology CDS 24 232 . + 0 ID=cds-C9F07_12500;Parent=gene-C9F07_12500;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454797.1;locus_tag=C9F07_12500;product=fimbrial chaperone;pseudo=true;transl_table=11 ##sequence-region PYKI01000323.1 1 246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000323.1 Genbank region 1 246 . + . ID=PYKI01000323.1:1..246;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000323.1 Genbank pseudogene 60 246 . + . ID=gene-C9F07_02240;Name=C9F07_02240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02240;pseudo=true PYKI01000323.1 Protein Homology CDS 60 246 . + 0 ID=cds-C9F07_02240;Parent=gene-C9F07_02240;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455874.1;locus_tag=C9F07_02240;product=carboxylesterase;pseudo=true;transl_table=11 ##sequence-region PYKI01000045.1 1 246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000045.1 Genbank region 1 246 . + . ID=PYKI01000045.1:1..246;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000045.1 Genbank gene 99 246 . + . ID=gene-C9F07_00250;Name=C9F07_00250;end_range=246,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00250;partial=true PYKI01000045.1 Protein Homology CDS 99 246 . + 0 ID=cds-TGE30193.1;Parent=gene-C9F07_00250;Dbxref=NCBI_GP:TGE30193.1;Name=TGE30193.1;end_range=246,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455687.1;locus_tag=C9F07_00250;partial=true;product=malonyl CoA-acyl carrier protein transacylase;protein_id=TGE30193.1;transl_table=11 ##sequence-region PYKI01000772.1 1 2766 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000772.1 Genbank region 1 2766 . + . ID=PYKI01000772.1:1..2766;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000772.1 Genbank gene 1 273 . + . ID=gene-C9F07_06855;Name=C9F07_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06855;partial=true;start_range=.,1 PYKI01000772.1 Protein Homology CDS 1 273 . + 0 ID=cds-TGE09203.1;Parent=gene-C9F07_06855;Dbxref=NCBI_GP:TGE09203.1;Name=TGE09203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463216.3;locus_tag=C9F07_06855;partial=true;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=TGE09203.1;start_range=.,1;transl_table=11 PYKI01000772.1 Genbank gene 543 618 . - . ID=gene-C9F07_06860;Name=C9F07_06860;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_06860 PYKI01000772.1 tRNAscan-SE tRNA 543 618 . - . ID=rna-C9F07_06860;Parent=gene-C9F07_06860;anticodon=(pos:complement(583..585));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_06860;product=tRNA-Gly PYKI01000772.1 tRNAscan-SE exon 543 618 . - . ID=exon-C9F07_06860-1;Parent=rna-C9F07_06860;anticodon=(pos:complement(583..585));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_06860;product=tRNA-Gly PYKI01000772.1 Genbank gene 894 1634 . + . ID=gene-C9F07_06865;Name=C9F07_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06865 PYKI01000772.1 Protein Homology CDS 894 1634 . + 0 ID=cds-TGE09204.1;Parent=gene-C9F07_06865;Dbxref=NCBI_GP:TGE09204.1;Name=TGE09204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=C9F07_06865;product=arginine ABC transporter substrate-binding protein;protein_id=TGE09204.1;transl_table=11 PYKI01000772.1 Genbank gene 1696 2241 . - . ID=gene-C9F07_06870;Name=C9F07_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06870 PYKI01000772.1 Protein Homology CDS 1696 2241 . - 0 ID=cds-TGE09205.1;Parent=gene-C9F07_06870;Dbxref=NCBI_GP:TGE09205.1;Name=TGE09205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458789.1;locus_tag=C9F07_06870;product=oligoribonuclease;protein_id=TGE09205.1;transl_table=11 PYKI01000772.1 Genbank pseudogene 2324 2716 . + . ID=gene-C9F07_06875;Name=C9F07_06875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06875;pseudo=true PYKI01000772.1 Protein Homology CDS 2324 2716 . + 0 ID=cds-C9F07_06875;Parent=gene-C9F07_06875;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458788.3;locus_tag=C9F07_06875;product=ribosome biogenesis GTPase RsgA;pseudo=true;transl_table=11 ##sequence-region PYKI01001165.1 1 246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001165.1 Genbank region 1 246 . + . ID=PYKI01001165.1:1..246;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001165.1 Genbank gene 1 111 . + . ID=gene-C9F07_10890;Name=C9F07_10890;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F07_10890;partial=true;start_range=.,1 PYKI01001165.1 cmsearch ncRNA 1 111 . + . ID=rna-C9F07_10890;Parent=gene-C9F07_10890;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_10890;partial=true;product=RtT sRNA;start_range=.,1 PYKI01001165.1 cmsearch exon 1 111 . + . ID=exon-C9F07_10890-1;Parent=rna-C9F07_10890;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_10890;partial=true;product=RtT sRNA;start_range=.,1 PYKI01001165.1 Genbank gene 147 246 . + . ID=gene-C9F07_10895;Name=C9F07_10895;end_range=246,.;gbkey=Gene;gene_biotype=ncRNA;locus_tag=C9F07_10895;partial=true PYKI01001165.1 cmsearch ncRNA 147 246 . + . ID=rna-C9F07_10895;Parent=gene-C9F07_10895;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;end_range=246,.;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_10895;partial=true;product=RtT sRNA PYKI01001165.1 cmsearch exon 147 246 . + . ID=exon-C9F07_10895-1;Parent=rna-C9F07_10895;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;end_range=246,.;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00391,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_10895;partial=true;product=RtT sRNA ##sequence-region PYKI01003359.1 1 246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003359.1 Genbank region 1 246 . + . ID=PYKI01003359.1:1..246;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003359.1 Genbank pseudogene 1 246 . + . ID=gene-C9F07_33835;Name=C9F07_33835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33835;pseudo=true PYKI01003359.1 Protein Homology CDS 1 246 . + 2 ID=cds-C9F07_33835;Parent=gene-C9F07_33835;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933952.1;locus_tag=C9F07_33835;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002216.1 1 246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002216.1 Genbank region 1 246 . + . ID=PYKI01002216.1:1..246;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002216.1 Genbank gene 1 246 . - . ID=gene-C9F07_21610;Name=C9F07_21610;end_range=246,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21610;partial=true;start_range=.,1 PYKI01002216.1 Protein Homology CDS 1 246 . - 1 ID=cds-TGD56477.1;Parent=gene-C9F07_21610;Dbxref=NCBI_GP:TGD56477.1;Name=TGD56477.1;end_range=246,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313264.1;locus_tag=C9F07_21610;partial=true;product=hypothetical protein;protein_id=TGD56477.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003092.1 1 246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003092.1 Genbank region 1 246 . + . ID=PYKI01003092.1:1..246;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003092.1 Genbank pseudogene 67 246 . + . ID=gene-C9F07_30940;Name=C9F07_30940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30940;pseudo=true PYKI01003092.1 Protein Homology CDS 67 246 . + 0 ID=cds-C9F07_30940;Parent=gene-C9F07_30940;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=C9F07_30940;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000157.1 1 246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000157.1 Genbank region 1 246 . + . ID=PYKI01000157.1:1..246;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000157.1 Genbank gene 1 246 . + . ID=gene-C9F07_01085;Name=C9F07_01085;end_range=246,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01085;partial=true;start_range=.,1 PYKI01000157.1 Protein Homology CDS 1 246 . + 1 ID=cds-TGE30067.1;Parent=gene-C9F07_01085;Dbxref=NCBI_GP:TGE30067.1;Name=TGE30067.1;end_range=246,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455783.1;locus_tag=C9F07_01085;partial=true;product=hypothetical protein;protein_id=TGE30067.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001438.1 1 245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001438.1 Genbank region 1 245 . + . ID=PYKI01001438.1:1..245;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001438.1 Genbank gene 1 245 . + . ID=gene-C9F07_13610;Name=C9F07_13610;end_range=245,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13610;partial=true;start_range=.,1 PYKI01001438.1 Protein Homology CDS 1 245 . + 0 ID=cds-TGD83696.1;Parent=gene-C9F07_13610;Dbxref=NCBI_GP:TGD83696.1;Name=TGD83696.1;end_range=245,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456650.1;locus_tag=C9F07_13610;partial=true;product=colanic acid exporter;protein_id=TGD83696.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001153.1 1 245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001153.1 Genbank region 1 245 . + . ID=PYKI01001153.1:1..245;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001153.1 Genbank gene 1 245 . + . ID=gene-C9F07_10770;Name=C9F07_10770;end_range=245,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10770;partial=true;start_range=.,1 PYKI01001153.1 Protein Homology CDS 1 245 . + 1 ID=cds-TGD93582.1;Parent=gene-C9F07_10770;Dbxref=NCBI_GP:TGD93582.1;Name=TGD93582.1;end_range=245,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457015.1;locus_tag=C9F07_10770;partial=true;product=hypothetical protein;protein_id=TGD93582.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003204.1 1 245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003204.1 Genbank region 1 245 . + . ID=PYKI01003204.1:1..245;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003204.1 Genbank pseudogene 1 245 . - . ID=gene-C9F07_32220;Name=C9F07_32220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32220;pseudo=true PYKI01003204.1 Protein Homology CDS 1 245 . - 2 ID=cds-C9F07_32220;Parent=gene-C9F07_32220;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=C9F07_32220;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000670.1 1 245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000670.1 Genbank region 1 245 . + . ID=PYKI01000670.1:1..245;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000670.1 Genbank gene 1 245 . - . ID=gene-C9F07_05840;Name=C9F07_05840;end_range=245,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05840;partial=true;start_range=.,1 PYKI01000670.1 Protein Homology CDS 1 245 . - 0 ID=cds-TGE11790.1;Parent=gene-C9F07_05840;Dbxref=NCBI_GP:TGE11790.1;Name=TGE11790.1;end_range=245,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455251.1;locus_tag=C9F07_05840;partial=true;product=hypothetical protein;protein_id=TGE11790.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000181.1 1 245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000181.1 Genbank region 1 245 . + . ID=PYKI01000181.1:1..245;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000181.1 Genbank gene 88 245 . + . ID=gene-C9F07_01230;Name=C9F07_01230;end_range=245,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01230;partial=true PYKI01000181.1 Protein Homology CDS 88 245 . + 0 ID=cds-TGE30045.1;Parent=gene-C9F07_01230;Dbxref=NCBI_GP:TGE30045.1;Name=TGE30045.1;Note=catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism;end_range=245,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457532.1;locus_tag=C9F07_01230;partial=true;product=glucuronate isomerase;protein_id=TGE30045.1;transl_table=11 ##sequence-region PYKI01003361.1 1 2759 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003361.1 Genbank region 1 2759 . + . ID=PYKI01003361.1:1..2759;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003361.1 Genbank gene 1 795 . - . ID=gene-C9F07_33850;Name=C9F07_33850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33850;partial=true;start_range=.,1 PYKI01003361.1 Protein Homology CDS 1 795 . - 0 ID=cds-TGD34730.1;Parent=gene-C9F07_33850;Dbxref=NCBI_GP:TGD34730.1;Name=TGD34730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457161.1;locus_tag=C9F07_33850;partial=true;product=secretion protein HlyD;protein_id=TGD34730.1;start_range=.,1;transl_table=11 PYKI01003361.1 Genbank gene 803 2647 . - . ID=gene-C9F07_33855;Name=C9F07_33855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33855 PYKI01003361.1 Protein Homology CDS 803 2647 . - 0 ID=cds-TGD34729.1;Parent=gene-C9F07_33855;Dbxref=NCBI_GP:TGD34729.1;Name=TGD34729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=C9F07_33855;product=ATP-binding protein;protein_id=TGD34729.1;transl_table=11 ##sequence-region PYKI01001069.1 1 245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001069.1 Genbank region 1 245 . + . ID=PYKI01001069.1:1..245;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001069.1 Genbank gene 1 245 . - . ID=gene-C9F07_09890;Name=C9F07_09890;end_range=245,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09890;partial=true;start_range=.,1 PYKI01001069.1 Protein Homology CDS 1 245 . - 1 ID=cds-TGD95929.1;Parent=gene-C9F07_09890;Dbxref=NCBI_GP:TGD95929.1;Name=TGD95929.1;Note=catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate;end_range=245,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417185.1;locus_tag=C9F07_09890;partial=true;product=sorbitol-6-phosphate 2-dehydrogenase;protein_id=TGD95929.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001994.1 1 245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001994.1 Genbank region 1 245 . + . ID=PYKI01001994.1:1..245;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001994.1 Genbank gene 1 245 . - . ID=gene-C9F07_19245;Name=C9F07_19245;end_range=245,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19245;partial=true;start_range=.,1 PYKI01001994.1 Protein Homology CDS 1 245 . - 2 ID=cds-TGD60181.1;Parent=gene-C9F07_19245;Dbxref=NCBI_GP:TGD60181.1;Name=TGD60181.1;end_range=245,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458587.1;locus_tag=C9F07_19245;partial=true;product=hypothetical protein;protein_id=TGD60181.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002063.1 1 245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002063.1 Genbank region 1 245 . + . ID=PYKI01002063.1:1..245;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002063.1 Genbank pseudogene 1 218 . + . ID=gene-C9F07_19975;Name=C9F07_19975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19975;pseudo=true PYKI01002063.1 Protein Homology CDS 1 218 . + 2 ID=cds-C9F07_19975;Parent=gene-C9F07_19975;Note=catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454613.1;locus_tag=C9F07_19975;product=homoserine kinase;pseudo=true;transl_table=11 ##sequence-region PYKI01000249.1 1 245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000249.1 Genbank region 1 245 . + . ID=PYKI01000249.1:1..245;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000249.1 Genbank pseudogene 65 245 . + . ID=gene-C9F07_01630;Name=C9F07_01630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01630;pseudo=true PYKI01000249.1 Protein Homology CDS 65 245 . + 0 ID=cds-C9F07_01630;Parent=gene-C9F07_01630;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456738.1;locus_tag=C9F07_01630;product=aromatic acid/H+ symport family MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01000014.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000014.1 Genbank region 1 244 . + . ID=PYKI01000014.1:1..244;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000014.1 Genbank gene 116 244 . + . ID=gene-C9F07_00075;Name=C9F07_00075;end_range=244,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00075;partial=true PYKI01000014.1 Protein Homology CDS 116 244 . + 0 ID=cds-TGE30217.1;Parent=gene-C9F07_00075;Dbxref=NCBI_GP:TGE30217.1;Name=TGE30217.1;end_range=244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455996.1;locus_tag=C9F07_00075;partial=true;product=serine protease;protein_id=TGE30217.1;transl_table=11 ##sequence-region PYKI01001404.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001404.1 Genbank region 1 244 . + . ID=PYKI01001404.1:1..244;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001404.1 Genbank pseudogene 37 244 . - . ID=gene-C9F07_13290;Name=C9F07_13290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13290;pseudo=true PYKI01001404.1 Protein Homology CDS 37 244 . - 1 ID=cds-C9F07_13290;Parent=gene-C9F07_13290;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455940.1;locus_tag=C9F07_13290;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01003257.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003257.1 Genbank region 1 244 . + . ID=PYKI01003257.1:1..244;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003257.1 Genbank gene 1 244 . - . ID=gene-C9F07_32755;Name=C9F07_32755;end_range=244,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32755;partial=true;start_range=.,1 PYKI01003257.1 Protein Homology CDS 1 244 . - 2 ID=cds-TGD36282.1;Parent=gene-C9F07_32755;Dbxref=NCBI_GP:TGD36282.1;Name=TGD36282.1;end_range=244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=C9F07_32755;partial=true;product=hydrogenase 2 large subunit;protein_id=TGD36282.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001106.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001106.1 Genbank region 1 244 . + . ID=PYKI01001106.1:1..244;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001106.1 Genbank gene 1 244 . - . ID=gene-C9F07_10320;Name=C9F07_10320;end_range=244,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10320;partial=true;start_range=.,1 PYKI01001106.1 Protein Homology CDS 1 244 . - 0 ID=cds-TGD95154.1;Parent=gene-C9F07_10320;Dbxref=NCBI_GP:TGD95154.1;Name=TGD95154.1;end_range=244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455075.1;locus_tag=C9F07_10320;partial=true;product=hypothetical protein;protein_id=TGD95154.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001696.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001696.1 Genbank region 1 244 . + . ID=PYKI01001696.1:1..244;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001696.1 Genbank gene 1 244 . + . ID=gene-C9F07_16180;Name=C9F07_16180;end_range=244,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16180;partial=true;start_range=.,1 PYKI01001696.1 Protein Homology CDS 1 244 . + 0 ID=cds-TGD69406.1;Parent=gene-C9F07_16180;Dbxref=NCBI_GP:TGD69406.1;Name=TGD69406.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;end_range=244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455247.1;locus_tag=C9F07_16180;partial=true;product=glutamine--tRNA ligase;protein_id=TGD69406.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002948.1 1 2757 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002948.1 Genbank region 1 2757 . + . ID=PYKI01002948.1:1..2757;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002948.1 Genbank pseudogene 1 213 . + . ID=gene-C9F07_29540;Name=C9F07_29540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29540;pseudo=true PYKI01002948.1 Protein Homology CDS 1 213 . + 0 ID=cds-C9F07_29540;Parent=gene-C9F07_29540;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457185.1;locus_tag=C9F07_29540;product=tricarboxylic transporter;pseudo=true;transl_table=11 PYKI01002948.1 Genbank gene 225 659 . + . ID=gene-C9F07_29545;Name=C9F07_29545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29545 PYKI01002948.1 Protein Homology CDS 225 659 . + 0 ID=cds-TGD42300.1;Parent=gene-C9F07_29545;Dbxref=NCBI_GP:TGD42300.1;Name=TGD42300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=C9F07_29545;product=tripartite tricarboxylate transporter TctB family protein;protein_id=TGD42300.1;transl_table=11 PYKI01002948.1 Genbank gene 670 2184 . + . ID=gene-C9F07_29550;Name=C9F07_29550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29550 PYKI01002948.1 Protein Homology CDS 670 2184 . + 0 ID=cds-TGD42301.1;Parent=gene-C9F07_29550;Dbxref=NCBI_GP:TGD42301.1;Name=TGD42301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=C9F07_29550;product=tripartite tricarboxylate transporter TctA;protein_id=TGD42301.1;transl_table=11 PYKI01002948.1 Genbank gene 2478 2757 . + . ID=gene-C9F07_29555;Name=C9F07_29555;end_range=2757,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29555;partial=true PYKI01002948.1 Protein Homology CDS 2478 2757 . + 0 ID=cds-TGD42302.1;Parent=gene-C9F07_29555;Dbxref=NCBI_GP:TGD42302.1;Name=TGD42302.1;end_range=2757,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457188.3;locus_tag=C9F07_29555;partial=true;product=carbon starvation induced protein;protein_id=TGD42302.1;transl_table=11 ##sequence-region PYKI01001538.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001538.1 Genbank region 1 244 . + . ID=PYKI01001538.1:1..244;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01000203.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000203.1 Genbank region 1 244 . + . ID=PYKI01000203.1:1..244;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000203.1 Genbank gene 1 211 . + . ID=gene-C9F07_01360;Name=C9F07_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01360;partial=true;start_range=.,1 PYKI01000203.1 Protein Homology CDS 1 211 . + 1 ID=cds-TGE30023.1;Parent=gene-C9F07_01360;Dbxref=NCBI_GP:TGE30023.1;Name=TGE30023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=C9F07_01360;partial=true;product=hypothetical protein;protein_id=TGE30023.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000536.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000536.1 Genbank region 1 244 . + . ID=PYKI01000536.1:1..244;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000536.1 Genbank gene 1 244 . + . ID=gene-C9F07_04455;Name=C9F07_04455;end_range=244,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04455;partial=true;start_range=.,1 PYKI01000536.1 Protein Homology CDS 1 244 . + 2 ID=cds-TGE15769.1;Parent=gene-C9F07_04455;Dbxref=NCBI_GP:TGE15769.1;Name=TGE15769.1;end_range=244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456674.1;locus_tag=C9F07_04455;partial=true;product=multidrug transporter;protein_id=TGE15769.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000837.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000837.1 Genbank region 1 244 . + . ID=PYKI01000837.1:1..244;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000837.1 Genbank gene 6 244 . + . ID=gene-C9F07_07640;Name=C9F07_07640;end_range=244,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07640;partial=true PYKI01000837.1 Protein Homology CDS 6 244 . + 0 ID=cds-TGE07105.1;Parent=gene-C9F07_07640;Dbxref=NCBI_GP:TGE07105.1;Name=TGE07105.1;end_range=244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457400.1;locus_tag=C9F07_07640;partial=true;product=hypothetical protein;protein_id=TGE07105.1;transl_table=11 ##sequence-region PYKI01000023.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000023.1 Genbank region 1 244 . + . ID=PYKI01000023.1:1..244;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000023.1 Genbank gene 1 244 . - . ID=gene-C9F07_00140;Name=C9F07_00140;end_range=244,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00140;partial=true;start_range=.,1 PYKI01000023.1 Protein Homology CDS 1 244 . - 0 ID=cds-TGE30208.1;Parent=gene-C9F07_00140;Dbxref=NCBI_GP:TGE30208.1;Name=TGE30208.1;end_range=244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457823.1;locus_tag=C9F07_00140;partial=true;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=TGE30208.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001637.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001637.1 Genbank region 1 244 . + . ID=PYKI01001637.1:1..244;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001637.1 Genbank pseudogene 1 201 . + . ID=gene-C9F07_15645;Name=C9F07_15645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15645;pseudo=true PYKI01001637.1 Protein Homology CDS 1 201 . + 0 ID=cds-C9F07_15645;Parent=gene-C9F07_15645;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457028.1;locus_tag=C9F07_15645;product=AI-2E family transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01002284.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002284.1 Genbank region 1 244 . + . ID=PYKI01002284.1:1..244;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002284.1 Genbank gene 1 244 . + . ID=gene-C9F07_22385;Name=C9F07_22385;end_range=244,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22385;partial=true;start_range=.,1 PYKI01002284.1 Protein Homology CDS 1 244 . + 1 ID=cds-TGD54840.1;Parent=gene-C9F07_22385;Dbxref=NCBI_GP:TGD54840.1;Name=TGD54840.1;end_range=244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000011516.1;locus_tag=C9F07_22385;partial=true;product=type VI secretion system tip protein VgrG;protein_id=TGD54840.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003479.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003479.1 Genbank region 1 244 . + . ID=PYKI01003479.1:1..244;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003479.1 Genbank pseudogene 44 244 . - . ID=gene-C9F07_35020;Name=C9F07_35020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35020;pseudo=true PYKI01003479.1 Protein Homology CDS 44 244 . - 0 ID=cds-C9F07_35020;Parent=gene-C9F07_35020;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458441.1;locus_tag=C9F07_35020;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000092.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000092.1 Genbank region 1 244 . + . ID=PYKI01000092.1:1..244;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000092.1 Genbank pseudogene 1 220 . - . ID=gene-C9F07_00595;Name=C9F07_00595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00595;pseudo=true PYKI01000092.1 Protein Homology CDS 1 220 . - 0 ID=cds-C9F07_00595;Parent=gene-C9F07_00595;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455799.1;locus_tag=C9F07_00595;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000305.1 1 2749 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000305.1 Genbank region 1 2749 . + . ID=PYKI01000305.1:1..2749;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000305.1 Genbank gene 35 973 . + . ID=gene-C9F07_02045;Name=C9F07_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02045 PYKI01000305.1 Protein Homology CDS 35 973 . + 0 ID=cds-TGE27787.1;Parent=gene-C9F07_02045;Dbxref=NCBI_GP:TGE27787.1;Name=TGE27787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454656.1;locus_tag=C9F07_02045;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=TGE27787.1;transl_table=11 PYKI01000305.1 Genbank gene 1018 2749 . + . ID=gene-C9F07_02050;Name=C9F07_02050;end_range=2749,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02050;partial=true PYKI01000305.1 Protein Homology CDS 1018 2749 . + 0 ID=cds-TGE27788.1;Parent=gene-C9F07_02050;Dbxref=NCBI_GP:TGE27788.1;Name=TGE27788.1;end_range=2749,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454657.1;locus_tag=C9F07_02050;partial=true;product=isoleucine--tRNA ligase;protein_id=TGE27788.1;transl_table=11 ##sequence-region PYKI01000148.1 1 243 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000148.1 Genbank region 1 243 . + . ID=PYKI01000148.1:1..243;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000148.1 Genbank gene 1 243 . - . ID=gene-C9F07_00995;Name=C9F07_00995;end_range=243,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00995;partial=true;start_range=.,1 PYKI01000148.1 Protein Homology CDS 1 243 . - 0 ID=cds-TGE30076.1;Parent=gene-C9F07_00995;Dbxref=NCBI_GP:TGE30076.1;Name=TGE30076.1;Note=catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety;end_range=243,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455019.1;locus_tag=C9F07_00995;partial=true;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=TGE30076.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002489.1 1 243 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002489.1 Genbank region 1 243 . + . ID=PYKI01002489.1:1..243;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002489.1 Genbank pseudogene 1 223 . + . ID=gene-C9F07_24625;Name=C9F07_24625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24625;pseudo=true PYKI01002489.1 Protein Homology CDS 1 223 . + 1 ID=cds-C9F07_24625;Parent=gene-C9F07_24625;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309876.1;locus_tag=C9F07_24625;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000251.1 1 243 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000251.1 Genbank region 1 243 . + . ID=PYKI01000251.1:1..243;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000251.1 Genbank gene 1 243 . - . ID=gene-C9F07_01640;Name=C9F07_01640;end_range=243,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01640;partial=true;start_range=.,1 PYKI01000251.1 Protein Homology CDS 1 243 . - 1 ID=cds-TGE27857.1;Parent=gene-C9F07_01640;Dbxref=NCBI_GP:TGE27857.1;Name=TGE27857.1;end_range=243,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457027.1;locus_tag=C9F07_01640;partial=true;product=gluconate:proton symporter;protein_id=TGE27857.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001986.1 1 242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001986.1 Genbank region 1 242 . + . ID=PYKI01001986.1:1..242;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001986.1 Genbank gene 1 242 . - . ID=gene-C9F07_19150;Name=C9F07_19150;end_range=242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19150;partial=true;start_range=.,1 PYKI01001986.1 Protein Homology CDS 1 242 . - 2 ID=cds-TGD60223.1;Parent=gene-C9F07_19150;Dbxref=NCBI_GP:TGD60223.1;Name=TGD60223.1;end_range=242,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455751.1;locus_tag=C9F07_19150;partial=true;product=hypothetical protein;protein_id=TGD60223.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000292.1 1 242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000292.1 Genbank region 1 242 . + . ID=PYKI01000292.1:1..242;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000292.1 Genbank pseudogene 1 120 . + . ID=gene-C9F07_01905;Name=C9F07_01905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01905;pseudo=true PYKI01000292.1 Protein Homology CDS 1 120 . + 0 ID=cds-C9F07_01905;Parent=gene-C9F07_01905;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462951.1;locus_tag=C9F07_01905;product=CDP-diacylglycerol pyrophosphatase;pseudo=true;transl_table=11 ##sequence-region PYKI01002972.1 1 242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002972.1 Genbank region 1 242 . + . ID=PYKI01002972.1:1..242;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002972.1 Genbank gene 1 114 . - . ID=gene-C9F07_29800;Name=C9F07_29800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29800;partial=true;start_range=.,1 PYKI01002972.1 Protein Homology CDS 1 114 . - 0 ID=cds-TGD41628.1;Parent=gene-C9F07_29800;Dbxref=NCBI_GP:TGD41628.1;Name=TGD41628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455899.1;locus_tag=C9F07_29800;partial=true;product=hypothetical protein;protein_id=TGD41628.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000658.1 1 242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000658.1 Genbank region 1 242 . + . ID=PYKI01000658.1:1..242;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000658.1 Genbank gene 1 242 . - . ID=gene-C9F07_05730;Name=C9F07_05730;end_range=242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05730;partial=true;start_range=.,1 PYKI01000658.1 Protein Homology CDS 1 242 . - 0 ID=cds-TGE12091.1;Parent=gene-C9F07_05730;Dbxref=NCBI_GP:TGE12091.1;Name=TGE12091.1;end_range=242,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454831.1;locus_tag=C9F07_05730;partial=true;product=hypothetical protein;protein_id=TGE12091.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002668.1 1 2742 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002668.1 Genbank region 1 2742 . + . ID=PYKI01002668.1:1..2742;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002668.1 Genbank gene 1 245 . + . ID=gene-C9F07_26565;Name=C9F07_26565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26565;partial=true;start_range=.,1 PYKI01002668.1 Protein Homology CDS 1 245 . + 2 ID=cds-TGD48979.1;Parent=gene-C9F07_26565;Dbxref=NCBI_GP:TGD48979.1;Name=TGD48979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454933.1;locus_tag=C9F07_26565;partial=true;product=hypothetical protein;protein_id=TGD48979.1;start_range=.,1;transl_table=11 PYKI01002668.1 Genbank gene 257 1507 . + . ID=gene-C9F07_26570;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=C9F07_26570 PYKI01002668.1 Protein Homology CDS 257 1507 . + 0 ID=cds-TGD48980.1;Parent=gene-C9F07_26570;Dbxref=NCBI_GP:TGD48980.1;Name=TGD48980.1;gbkey=CDS;gene=proA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=C9F07_26570;product=gamma-glutamyl-phosphate reductase;protein_id=TGD48980.1;transl_table=11 PYKI01002668.1 Genbank gene 1623 1698 . + . ID=gene-C9F07_26575;Name=C9F07_26575;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_26575 PYKI01002668.1 tRNAscan-SE tRNA 1623 1698 . + . ID=rna-C9F07_26575;Parent=gene-C9F07_26575;anticodon=(pos:1656..1658);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_26575;product=tRNA-Thr PYKI01002668.1 tRNAscan-SE exon 1623 1698 . + . ID=exon-C9F07_26575-1;Parent=rna-C9F07_26575;anticodon=(pos:1656..1658);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_26575;product=tRNA-Thr PYKI01002668.1 Genbank gene 1859 2053 . + . ID=gene-C9F07_26580;Name=C9F07_26580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26580 PYKI01002668.1 Protein Homology CDS 1859 2053 . + 0 ID=cds-TGD48981.1;Parent=gene-C9F07_26580;Dbxref=NCBI_GP:TGD48981.1;Name=TGD48981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000206919.1;locus_tag=C9F07_26580;product=hypothetical protein;protein_id=TGD48981.1;transl_table=11 PYKI01002668.1 Genbank pseudogene 2101 2706 . - . ID=gene-C9F07_26585;Name=C9F07_26585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26585;pseudo=true PYKI01002668.1 Protein Homology CDS 2101 2706 . - 0 ID=cds-C9F07_26585;Parent=gene-C9F07_26585;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454936.1;locus_tag=C9F07_26585;product=fimbrial assembly protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000206.1 1 242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000206.1 Genbank region 1 242 . + . ID=PYKI01000206.1:1..242;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01003474.1 1 242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003474.1 Genbank region 1 242 . + . ID=PYKI01003474.1:1..242;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003474.1 Genbank gene 1 242 . + . ID=gene-C9F07_34940;Name=C9F07_34940;end_range=242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34940;partial=true;start_range=.,1 PYKI01003474.1 Protein Homology CDS 1 242 . + 2 ID=cds-TGD32532.1;Parent=gene-C9F07_34940;Dbxref=NCBI_GP:TGD32532.1;Name=TGD32532.1;end_range=242,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463399.3;locus_tag=C9F07_34940;partial=true;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=TGD32532.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001671.1 1 242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001671.1 Genbank region 1 242 . + . ID=PYKI01001671.1:1..242;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001671.1 Genbank gene 1 227 . - . ID=gene-C9F07_15950;Name=C9F07_15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15950;partial=true;start_range=.,1 PYKI01001671.1 Protein Homology CDS 1 227 . - 0 ID=cds-TGD70111.1;Parent=gene-C9F07_15950;Dbxref=NCBI_GP:TGD70111.1;Name=TGD70111.1;Note=responsible for the influx of magnesium ions;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=C9F07_15950;partial=true;product=magnesium transporter CorA;protein_id=TGD70111.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000696.1 1 242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000696.1 Genbank region 1 242 . + . ID=PYKI01000696.1:1..242;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000696.1 Genbank pseudogene 73 171 . - . ID=gene-C9F07_06100;Name=C9F07_06100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06100;pseudo=true PYKI01000696.1 Protein Homology CDS 73 171 . - 0 ID=cds-C9F07_06100;Parent=gene-C9F07_06100;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457137.1;locus_tag=C9F07_06100;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001824.1 1 242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001824.1 Genbank region 1 242 . + . ID=PYKI01001824.1:1..242;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001824.1 Genbank gene 1 242 . + . ID=gene-C9F07_17540;Name=C9F07_17540;end_range=242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17540;partial=true;start_range=.,1 PYKI01001824.1 Protein Homology CDS 1 242 . + 2 ID=cds-TGD64370.1;Parent=gene-C9F07_17540;Dbxref=NCBI_GP:TGD64370.1;Name=TGD64370.1;end_range=242,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454884.1;locus_tag=C9F07_17540;partial=true;product=type VI secretion system baseplate subunit TssK;protein_id=TGD64370.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000218.1 1 242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000218.1 Genbank region 1 242 . + . ID=PYKI01000218.1:1..242;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000218.1 Genbank pseudogene 76 201 . + . ID=gene-C9F07_01435;Name=C9F07_01435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01435;pseudo=true PYKI01000218.1 Protein Homology CDS 76 201 . + 0 ID=cds-C9F07_01435;Parent=gene-C9F07_01435;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456852.1;locus_tag=C9F07_01435;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;pseudo=true;transl_table=11 ##sequence-region PYKI01000010.1 1 242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000010.1 Genbank region 1 242 . + . ID=PYKI01000010.1:1..242;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000010.1 Genbank gene 1 242 . + . ID=gene-C9F07_00055;Name=C9F07_00055;end_range=242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00055;partial=true;start_range=.,1 PYKI01000010.1 Protein Homology CDS 1 242 . + 0 ID=cds-TGE30219.1;Parent=gene-C9F07_00055;Dbxref=NCBI_GP:TGE30219.1;Name=TGE30219.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;end_range=242,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=C9F07_00055;partial=true;product=undecaprenyl-diphosphatase;protein_id=TGE30219.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001379.1 1 241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001379.1 Genbank region 1 241 . + . ID=PYKI01001379.1:1..241;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001379.1 Genbank gene 1 241 . - . ID=gene-C9F07_12970;Name=C9F07_12970;end_range=241,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12970;partial=true;start_range=.,1 PYKI01001379.1 Protein Homology CDS 1 241 . - 2 ID=cds-TGD84474.1;Parent=gene-C9F07_12970;Dbxref=NCBI_GP:TGD84474.1;Name=TGD84474.1;end_range=241,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458441.1;locus_tag=C9F07_12970;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGD84474.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000013.1 1 241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000013.1 Genbank region 1 241 . + . ID=PYKI01000013.1:1..241;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000013.1 Genbank pseudogene 1 221 . + . ID=gene-C9F07_00070;Name=C9F07_00070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00070;pseudo=true PYKI01000013.1 Protein Homology CDS 1 221 . + 2 ID=cds-C9F07_00070;Parent=gene-C9F07_00070;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004166081.1;locus_tag=C9F07_00070;product=phosphoenolpyruvate carboxylase;pseudo=true;transl_table=11 ##sequence-region PYKI01000270.1 1 241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000270.1 Genbank region 1 241 . + . ID=PYKI01000270.1:1..241;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000270.1 Genbank gene 31 231 . - . ID=gene-C9F07_01750;Name=C9F07_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01750 PYKI01000270.1 Protein Homology CDS 31 231 . - 0 ID=cds-TGE27840.1;Parent=gene-C9F07_01750;Dbxref=NCBI_GP:TGE27840.1;Name=TGE27840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=C9F07_01750;product=hypothetical protein;protein_id=TGE27840.1;transl_table=11 ##sequence-region PYKI01000691.1 1 2742 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000691.1 Genbank region 1 2742 . + . ID=PYKI01000691.1:1..2742;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000691.1 Genbank gene 1 202 . - . ID=gene-C9F07_06030;Name=C9F07_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06030;partial=true;start_range=.,1 PYKI01000691.1 Protein Homology CDS 1 202 . - 0 ID=cds-TGE11334.1;Parent=gene-C9F07_06030;Dbxref=NCBI_GP:TGE11334.1;Name=TGE11334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454674.1;locus_tag=C9F07_06030;partial=true;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=TGE11334.1;start_range=.,1;transl_table=11 PYKI01000691.1 Genbank gene 180 731 . - . ID=gene-C9F07_06035;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=C9F07_06035 PYKI01000691.1 Protein Homology CDS 180 731 . - 0 ID=cds-TGE11335.1;Parent=gene-C9F07_06035;Dbxref=NCBI_GP:TGE11335.1;Name=TGE11335.1;gbkey=CDS;gene=citX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454673.1;locus_tag=C9F07_06035;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=TGE11335.1;transl_table=11 PYKI01000691.1 Genbank gene 731 2251 . - . ID=gene-C9F07_06040;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=C9F07_06040 PYKI01000691.1 Protein Homology CDS 731 2251 . - 0 ID=cds-TGE11336.1;Parent=gene-C9F07_06040;Dbxref=NCBI_GP:TGE11336.1;Name=TGE11336.1;gbkey=CDS;gene=citF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=C9F07_06040;product=citrate lyase subunit alpha;protein_id=TGE11336.1;transl_table=11 PYKI01000691.1 Genbank gene 2262 2742 . - . ID=gene-C9F07_06045;Name=C9F07_06045;end_range=2742,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06045;partial=true PYKI01000691.1 Protein Homology CDS 2262 2742 . - 1 ID=cds-TGE11337.1;Parent=gene-C9F07_06045;Dbxref=NCBI_GP:TGE11337.1;Name=TGE11337.1;Note=citryl-ACP lyase%3B catalyzes the formation of acetate and oxaloacetate from citrate;end_range=2742,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=C9F07_06045;partial=true;product=citrate lyase subunit beta;protein_id=TGE11337.1;transl_table=11 ##sequence-region PYKI01003548.1 1 5874 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003548.1 Genbank region 1 5874 . + . ID=PYKI01003548.1:1..5874;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003548.1 Genbank pseudogene 1 136 . + . ID=gene-C9F07_35800;Name=C9F07_35800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35800;pseudo=true PYKI01003548.1 Protein Homology CDS 1 136 . + 1 ID=cds-C9F07_35800;Parent=gene-C9F07_35800;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459042.1;locus_tag=C9F07_35800;product=cytoplasmic protein;pseudo=true;transl_table=11 PYKI01003548.1 Genbank pseudogene 127 1023 . - . ID=gene-C9F07_35805;Name=C9F07_35805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35805;pseudo=true PYKI01003548.1 Protein Homology CDS 127 1023 . - 0 ID=cds-C9F07_35805;Parent=gene-C9F07_35805;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459042.1;locus_tag=C9F07_35805;product=cytoplasmic protein;pseudo=true;transl_table=11 PYKI01003548.1 Genbank gene 1042 2232 . - . ID=gene-C9F07_35810;Name=C9F07_35810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35810 PYKI01003548.1 Protein Homology CDS 1042 2232 . - 0 ID=cds-TGD30825.1;Parent=gene-C9F07_35810;Dbxref=NCBI_GP:TGD30825.1;Name=TGD30825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459041.1;locus_tag=C9F07_35810;product=anaerobic sulfatase maturase;protein_id=TGD30825.1;transl_table=11 PYKI01003548.1 Genbank gene 2331 3824 . - . ID=gene-C9F07_35815;Name=C9F07_35815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35815 PYKI01003548.1 Protein Homology CDS 2331 3824 . - 0 ID=cds-TGD30826.1;Parent=gene-C9F07_35815;Dbxref=NCBI_GP:TGD30826.1;Name=TGD30826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=C9F07_35815;product=arylsulfatase;protein_id=TGD30826.1;transl_table=11 PYKI01003548.1 Genbank gene 3906 4112 . + . ID=gene-C9F07_35820;Name=C9F07_35820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35820 PYKI01003548.1 Protein Homology CDS 3906 4112 . + 0 ID=cds-TGD30827.1;Parent=gene-C9F07_35820;Dbxref=NCBI_GP:TGD30827.1;Name=TGD30827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559136.1;locus_tag=C9F07_35820;product=hypothetical protein;protein_id=TGD30827.1;transl_table=11 PYKI01003548.1 Genbank gene 4420 5181 . + . ID=gene-C9F07_35825;Name=C9F07_35825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35825 PYKI01003548.1 Protein Homology CDS 4420 5181 . + 0 ID=cds-TGD30828.1;Parent=gene-C9F07_35825;Dbxref=NCBI_GP:TGD30828.1;Name=TGD30828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459039.1;locus_tag=C9F07_35825;product=hypothetical protein;protein_id=TGD30828.1;transl_table=11 PYKI01003548.1 Genbank gene 5280 5874 . + . ID=gene-C9F07_35830;Name=C9F07_35830;end_range=5874,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35830;partial=true PYKI01003548.1 Protein Homology CDS 5280 5874 . + 0 ID=cds-TGD30829.1;Parent=gene-C9F07_35830;Dbxref=NCBI_GP:TGD30829.1;Name=TGD30829.1;end_range=5874,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454644.1;locus_tag=C9F07_35830;partial=true;product=multifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase;protein_id=TGD30829.1;transl_table=11 ##sequence-region PYKI01000264.1 1 241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000264.1 Genbank region 1 241 . + . ID=PYKI01000264.1:1..241;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01000970.1 1 241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000970.1 Genbank region 1 241 . + . ID=PYKI01000970.1:1..241;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000970.1 Genbank pseudogene 1 188 . + . ID=gene-C9F07_08855;Name=C9F07_08855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08855;pseudo=true PYKI01000970.1 Protein Homology CDS 1 188 . + 2 ID=cds-C9F07_08855;Parent=gene-C9F07_08855;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456067.1;locus_tag=C9F07_08855;product=adenosine deaminase;pseudo=true;transl_table=11 ##sequence-region PYKI01000867.1 1 240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000867.1 Genbank region 1 240 . + . ID=PYKI01000867.1:1..240;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000867.1 Genbank gene 1 240 . + . ID=gene-C9F07_07970;Name=C9F07_07970;end_range=240,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07970;partial=true;start_range=.,1 PYKI01000867.1 Protein Homology CDS 1 240 . + 1 ID=cds-TGE05180.1;Parent=gene-C9F07_07970;Dbxref=NCBI_GP:TGE05180.1;Name=TGE05180.1;end_range=240,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458113.1;locus_tag=C9F07_07970;partial=true;product=hypothetical protein;protein_id=TGE05180.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000223.1 1 240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000223.1 Genbank region 1 240 . + . ID=PYKI01000223.1:1..240;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000223.1 Genbank gene 1 240 . - . ID=gene-C9F07_01460;Name=C9F07_01460;end_range=240,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01460;partial=true;start_range=.,1 PYKI01000223.1 Protein Homology CDS 1 240 . - 0 ID=cds-TGE30011.1;Parent=gene-C9F07_01460;Dbxref=NCBI_GP:TGE30011.1;Name=TGE30011.1;end_range=240,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457083.1;locus_tag=C9F07_01460;partial=true;product=stationary phase inducible protein CsiE;protein_id=TGE30011.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000411.1 1 240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000411.1 Genbank region 1 240 . + . ID=PYKI01000411.1:1..240;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000411.1 Genbank pseudogene 1 180 . - . ID=gene-C9F07_03160;Name=C9F07_03160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03160;pseudo=true PYKI01000411.1 Protein Homology CDS 1 180 . - 0 ID=cds-C9F07_03160;Parent=gene-C9F07_03160;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458432.1;locus_tag=C9F07_03160;product=cell filamentation protein Fic;pseudo=true;transl_table=11 ##sequence-region PYKI01001126.1 1 240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001126.1 Genbank region 1 240 . + . ID=PYKI01001126.1:1..240;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001126.1 Genbank gene 1 240 . - . ID=gene-C9F07_10475;Name=C9F07_10475;end_range=240,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10475;partial=true;start_range=.,1 PYKI01001126.1 Protein Homology CDS 1 240 . - 0 ID=cds-TGD94807.1;Parent=gene-C9F07_10475;Dbxref=NCBI_GP:TGD94807.1;Name=TGD94807.1;end_range=240,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454914.1;locus_tag=C9F07_10475;partial=true;product=hypothetical protein;protein_id=TGD94807.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001194.1 1 240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001194.1 Genbank region 1 240 . + . ID=PYKI01001194.1:1..240;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001194.1 Genbank gene 1 240 . - . ID=gene-C9F07_11185;Name=C9F07_11185;end_range=240,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11185;partial=true;start_range=.,1 PYKI01001194.1 Protein Homology CDS 1 240 . - 0 ID=cds-TGD91811.1;Parent=gene-C9F07_11185;Dbxref=NCBI_GP:TGD91811.1;Name=TGD91811.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock;end_range=240,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456943.1;locus_tag=C9F07_11185;partial=true;product=lipid A biosynthesis palmitoleoyl acyltransferase;protein_id=TGD91811.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000474.1 1 240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000474.1 Genbank region 1 240 . + . ID=PYKI01000474.1:1..240;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000474.1 Genbank gene 1 240 . - . ID=gene-C9F07_03770;Name=C9F07_03770;end_range=240,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03770;partial=true;start_range=.,1 PYKI01000474.1 Protein Homology CDS 1 240 . - 1 ID=cds-TGE19376.1;Parent=gene-C9F07_03770;Dbxref=NCBI_GP:TGE19376.1;Name=TGE19376.1;end_range=240,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454666.1;locus_tag=C9F07_03770;partial=true;product=hypothetical protein;protein_id=TGE19376.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002666.1 1 2740 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002666.1 Genbank region 1 2740 . + . ID=PYKI01002666.1:1..2740;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002666.1 Genbank gene 1 233 . - . ID=gene-C9F07_26530;Name=C9F07_26530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26530;partial=true;start_range=.,1 PYKI01002666.1 Protein Homology CDS 1 233 . - 0 ID=cds-TGD48991.1;Parent=gene-C9F07_26530;Dbxref=NCBI_GP:TGD48991.1;Name=TGD48991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455156.1;locus_tag=C9F07_26530;partial=true;product=hypothetical protein;protein_id=TGD48991.1;start_range=.,1;transl_table=11 PYKI01002666.1 Genbank gene 233 814 . - . ID=gene-C9F07_26535;Name=C9F07_26535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26535 PYKI01002666.1 Protein Homology CDS 233 814 . - 0 ID=cds-TGD48992.1;Parent=gene-C9F07_26535;Dbxref=NCBI_GP:TGD48992.1;Name=TGD48992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=C9F07_26535;product=TetR/AcrR family transcriptional regulator;protein_id=TGD48992.1;transl_table=11 PYKI01002666.1 Genbank gene 1103 1444 . + . ID=gene-C9F07_26540;Name=ramA;gbkey=Gene;gene=ramA;gene_biotype=protein_coding;locus_tag=C9F07_26540 PYKI01002666.1 Protein Homology CDS 1103 1444 . + 0 ID=cds-TGD48993.1;Parent=gene-C9F07_26540;Dbxref=NCBI_GP:TGD48993.1;Name=TGD48993.1;gbkey=CDS;gene=ramA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455158.1;locus_tag=C9F07_26540;product=RamA family antibiotic efflux transcriptional regulator;protein_id=TGD48993.1;transl_table=11 PYKI01002666.1 Genbank gene 1450 1698 . - . ID=gene-C9F07_26545;Name=C9F07_26545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26545 PYKI01002666.1 Protein Homology CDS 1450 1698 . - 0 ID=cds-TGD48994.1;Parent=gene-C9F07_26545;Dbxref=NCBI_GP:TGD48994.1;Name=TGD48994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=C9F07_26545;product=DUF1158 domain-containing protein;protein_id=TGD48994.1;transl_table=11 PYKI01002666.1 Genbank pseudogene 1765 2740 . - . ID=gene-C9F07_26550;Name=C9F07_26550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26550;pseudo=true PYKI01002666.1 Protein Homology CDS 1765 2740 . - 1 ID=cds-C9F07_26550;Parent=gene-C9F07_26550;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455160.1;locus_tag=C9F07_26550;product=glutamate--cysteine ligase;pseudo=true;transl_table=11 ##sequence-region PYKI01000875.1 1 240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000875.1 Genbank region 1 240 . + . ID=PYKI01000875.1:1..240;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000875.1 Genbank gene 1 174 . + . ID=gene-C9F07_08040;Name=C9F07_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08040;partial=true;start_range=.,1 PYKI01000875.1 Protein Homology CDS 1 174 . + 0 ID=cds-TGE04971.1;Parent=gene-C9F07_08040;Dbxref=NCBI_GP:TGE04971.1;Name=TGE04971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459277.1;locus_tag=C9F07_08040;partial=true;product=type VI secretion system tube protein Hcp;protein_id=TGE04971.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003592.1 1 240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003592.1 Genbank region 1 240 . + . ID=PYKI01003592.1:1..240;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003592.1 Genbank gene 1 185 . - . ID=gene-C9F07_36225;Name=C9F07_36225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36225;partial=true;start_range=.,1 PYKI01003592.1 Protein Homology CDS 1 185 . - 0 ID=cds-TGD29825.1;Parent=gene-C9F07_36225;Dbxref=NCBI_GP:TGD29825.1;Name=TGD29825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457095.1;locus_tag=C9F07_36225;partial=true;product=phosphoribosylglycinamide synthetase;protein_id=TGD29825.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000769.1 1 240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000769.1 Genbank region 1 240 . + . ID=PYKI01000769.1:1..240;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000769.1 Genbank pseudogene 1 224 . - . ID=gene-C9F07_06795;Name=C9F07_06795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06795;pseudo=true PYKI01000769.1 Protein Homology CDS 1 224 . - 0 ID=cds-C9F07_06795;Parent=gene-C9F07_06795;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013366615.1;locus_tag=C9F07_06795;product=DUF441 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001595.1 1 239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001595.1 Genbank region 1 239 . + . ID=PYKI01001595.1:1..239;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001595.1 Genbank gene 1 239 . + . ID=gene-C9F07_15240;Name=C9F07_15240;end_range=239,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15240;partial=true;start_range=.,1 PYKI01001595.1 Protein Homology CDS 1 239 . + 0 ID=cds-TGD71667.1;Parent=gene-C9F07_15240;Dbxref=NCBI_GP:TGD71667.1;Name=TGD71667.1;end_range=239,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819335.1;locus_tag=C9F07_15240;partial=true;product=asparagine--tRNA ligase;protein_id=TGD71667.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002347.1 1 239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002347.1 Genbank region 1 239 . + . ID=PYKI01002347.1:1..239;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002347.1 Genbank gene 1 239 . - . ID=gene-C9F07_23065;Name=C9F07_23065;end_range=239,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23065;partial=true;start_range=.,1 PYKI01002347.1 Protein Homology CDS 1 239 . - 2 ID=cds-TGD53398.1;Parent=gene-C9F07_23065;Dbxref=NCBI_GP:TGD53398.1;Name=TGD53398.1;end_range=239,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458235.1;locus_tag=C9F07_23065;partial=true;product=hypothetical protein;protein_id=TGD53398.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002371.1 1 239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002371.1 Genbank region 1 239 . + . ID=PYKI01002371.1:1..239;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002371.1 Genbank gene 58 239 . + . ID=gene-C9F07_23310;Name=lpxK;end_range=239,.;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=C9F07_23310;partial=true PYKI01002371.1 Protein Homology CDS 58 239 . + 0 ID=cds-TGD52747.1;Parent=gene-C9F07_23310;Dbxref=NCBI_GP:TGD52747.1;Name=TGD52747.1;Note=transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate;end_range=239,.;gbkey=CDS;gene=lpxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=C9F07_23310;partial=true;product=tetraacyldisaccharide 4'-kinase;protein_id=TGD52747.1;transl_table=11 ##sequence-region PYKI01002083.1 1 239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002083.1 Genbank region 1 239 . + . ID=PYKI01002083.1:1..239;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002083.1 Genbank pseudogene 1 109 . + . ID=gene-C9F07_20210;Name=C9F07_20210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20210;pseudo=true PYKI01002083.1 Protein Homology CDS 1 109 . + 1 ID=cds-C9F07_20210;Parent=gene-C9F07_20210;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805558.1;locus_tag=C9F07_20210;product=DNA-invertase;pseudo=true;transl_table=11 ##sequence-region PYKI01000783.1 1 2739 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000783.1 Genbank region 1 2739 . + . ID=PYKI01000783.1:1..2739;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000783.1 Genbank gene 1 2739 . - . ID=gene-C9F07_07070;Name=C9F07_07070;end_range=2739,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07070;partial=true;start_range=.,1 PYKI01000783.1 Protein Homology CDS 1 2739 . - 2 ID=cds-TGE09165.1;Parent=gene-C9F07_07070;Dbxref=NCBI_GP:TGE09165.1;Name=TGE09165.1;end_range=2739,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000526060.1;locus_tag=C9F07_07070;partial=true;product=phage tail tape measure protein;protein_id=TGE09165.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000159.1 1 239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000159.1 Genbank region 1 239 . + . ID=PYKI01000159.1:1..239;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000159.1 Genbank gene 1 239 . + . ID=gene-C9F07_01090;Name=C9F07_01090;end_range=239,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01090;partial=true;start_range=.,1 PYKI01000159.1 Protein Homology CDS 1 239 . + 0 ID=cds-TGE30066.1;Parent=gene-C9F07_01090;Dbxref=NCBI_GP:TGE30066.1;Name=TGE30066.1;end_range=239,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456526.1;locus_tag=C9F07_01090;partial=true;product=hypothetical protein;protein_id=TGE30066.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002188.1 1 238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002188.1 Genbank region 1 238 . + . ID=PYKI01002188.1:1..238;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002188.1 Genbank gene 1 238 . - . ID=gene-C9F07_21265;Name=C9F07_21265;end_range=238,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21265;partial=true;start_range=.,1 PYKI01002188.1 Protein Homology CDS 1 238 . - 1 ID=cds-TGD56622.1;Parent=gene-C9F07_21265;Dbxref=NCBI_GP:TGD56622.1;Name=TGD56622.1;end_range=238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455811.1;locus_tag=C9F07_21265;partial=true;product=peptide ABC transporter substrate-binding protein SapA;protein_id=TGD56622.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001333.1 1 237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001333.1 Genbank region 1 237 . + . ID=PYKI01001333.1:1..237;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001333.1 Genbank gene 108 237 . + . ID=gene-C9F07_12455;Name=C9F07_12455;end_range=237,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12455;partial=true PYKI01001333.1 Protein Homology CDS 108 237 . + 0 ID=cds-TGD85788.1;Parent=gene-C9F07_12455;Dbxref=NCBI_GP:TGD85788.1;Name=TGD85788.1;end_range=237,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457795.1;locus_tag=C9F07_12455;partial=true;product=thioesterase family protein;protein_id=TGD85788.1;transl_table=11 ##sequence-region PYKI01001230.1 1 237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001230.1 Genbank region 1 237 . + . ID=PYKI01001230.1:1..237;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001230.1 Genbank pseudogene 32 237 . - . ID=gene-C9F07_11510;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=pseudogene;locus_tag=C9F07_11510;pseudo=true PYKI01001230.1 Protein Homology CDS 32 237 . - 2 ID=cds-C9F07_11510;Parent=gene-C9F07_11510;Note=activates pyruvate formate-lyase 1 under anaerobic conditions%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=pflA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455458.1;locus_tag=C9F07_11510;product=pyruvate formate lyase-activating protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000196.1 1 237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000196.1 Genbank region 1 237 . + . ID=PYKI01000196.1:1..237;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000196.1 Genbank gene 54 237 . + . ID=gene-C9F07_01320;Name=C9F07_01320;end_range=237,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01320;partial=true PYKI01000196.1 Protein Homology CDS 54 237 . + 0 ID=cds-TGE30030.1;Parent=gene-C9F07_01320;Dbxref=NCBI_GP:TGE30030.1;Name=TGE30030.1;end_range=237,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019076872.1;locus_tag=C9F07_01320;partial=true;product=phosphatidylglycerophosphatase B;protein_id=TGE30030.1;transl_table=11 ##sequence-region PYKI01000012.1 1 237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000012.1 Genbank region 1 237 . + . ID=PYKI01000012.1:1..237;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000012.1 Genbank gene 1 237 . + . ID=gene-C9F07_00065;Name=C9F07_00065;end_range=237,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00065;partial=true;start_range=.,1 PYKI01000012.1 Protein Homology CDS 1 237 . + 1 ID=cds-TGE30218.1;Parent=gene-C9F07_00065;Dbxref=NCBI_GP:TGE30218.1;Name=TGE30218.1;Note=response regulator in two-component regulatory system with KdpD%3B regulates the kdp operon involved in potassium transport;end_range=237,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455262.1;locus_tag=C9F07_00065;partial=true;product=two-component system response regulator KdpE;protein_id=TGE30218.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003420.1 1 237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003420.1 Genbank region 1 237 . + . ID=PYKI01003420.1:1..237;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003420.1 Genbank gene 1 237 . - . ID=gene-C9F07_34395;Name=C9F07_34395;end_range=237,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34395;partial=true;start_range=.,1 PYKI01003420.1 Protein Homology CDS 1 237 . - 1 ID=cds-TGD33644.1;Parent=gene-C9F07_34395;Dbxref=NCBI_GP:TGD33644.1;Name=TGD33644.1;end_range=237,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457206.1;locus_tag=C9F07_34395;partial=true;product=hypothetical protein;protein_id=TGD33644.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000508.1 1 2739 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000508.1 Genbank region 1 2739 . + . ID=PYKI01000508.1:1..2739;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000508.1 Genbank pseudogene 47 259 . - . ID=gene-C9F07_04165;Name=C9F07_04165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04165;pseudo=true PYKI01000508.1 Protein Homology CDS 47 259 . - 0 ID=cds-C9F07_04165;Parent=gene-C9F07_04165;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458695.1;locus_tag=C9F07_04165;product=baseplate assembly protein;pseudo=true;transl_table=11 PYKI01000508.1 Genbank gene 246 605 . - . ID=gene-C9F07_04170;Name=C9F07_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04170 PYKI01000508.1 Protein Homology CDS 246 605 . - 0 ID=cds-TGE16940.1;Parent=gene-C9F07_04170;Dbxref=NCBI_GP:TGE16940.1;Name=TGE16940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458696.1;locus_tag=C9F07_04170;product=baseplate assembly protein;protein_id=TGE16940.1;transl_table=11 PYKI01000508.1 Genbank gene 602 1180 . - . ID=gene-C9F07_04175;Name=C9F07_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04175 PYKI01000508.1 Protein Homology CDS 602 1180 . - 0 ID=cds-TGE16941.1;Parent=gene-C9F07_04175;Dbxref=NCBI_GP:TGE16941.1;Name=TGE16941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458697.1;locus_tag=C9F07_04175;product=phage baseplate assembly protein V;protein_id=TGE16941.1;transl_table=11 PYKI01000508.1 Genbank gene 1249 1695 . - . ID=gene-C9F07_04180;Name=C9F07_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04180 PYKI01000508.1 Protein Homology CDS 1249 1695 . - 0 ID=cds-TGE16942.1;Parent=gene-C9F07_04180;Dbxref=NCBI_GP:TGE16942.1;Name=TGE16942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458698.1;locus_tag=C9F07_04180;product=phage virion morphogenesis protein;protein_id=TGE16942.1;transl_table=11 PYKI01000508.1 Genbank gene 1688 2119 . - . ID=gene-C9F07_04185;Name=C9F07_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04185 PYKI01000508.1 Protein Homology CDS 1688 2119 . - 0 ID=cds-TGE16943.1;Parent=gene-C9F07_04185;Dbxref=NCBI_GP:TGE16943.1;Name=TGE16943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457876.1;locus_tag=C9F07_04185;product=phage tail protein;protein_id=TGE16943.1;transl_table=11 PYKI01000508.1 Genbank gene 2082 2285 . - . ID=gene-C9F07_04190;Name=C9F07_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04190 PYKI01000508.1 Protein Homology CDS 2082 2285 . - 0 ID=cds-TGE16944.1;Parent=gene-C9F07_04190;Dbxref=NCBI_GP:TGE16944.1;Name=TGE16944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001177678.1;locus_tag=C9F07_04190;product=hypothetical protein;protein_id=TGE16944.1;transl_table=11 PYKI01000508.1 Genbank gene 2215 2640 . - . ID=gene-C9F07_04195;Name=C9F07_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04195 PYKI01000508.1 Protein Homology CDS 2215 2640 . - 0 ID=cds-TGE16945.1;Parent=gene-C9F07_04195;Dbxref=NCBI_GP:TGE16945.1;Name=TGE16945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458700.1;locus_tag=C9F07_04195;product=LysB family phage lysis regulatory protein;protein_id=TGE16945.1;transl_table=11 PYKI01000508.1 Genbank gene 2640 2739 . - . ID=gene-C9F07_04200;Name=C9F07_04200;end_range=2739,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04200;partial=true PYKI01000508.1 Protein Homology CDS 2640 2739 . - 1 ID=cds-TGE16946.1;Parent=gene-C9F07_04200;Dbxref=NCBI_GP:TGE16946.1;Name=TGE16946.1;end_range=2739,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458701.1;locus_tag=C9F07_04200;partial=true;product=peptidase;protein_id=TGE16946.1;transl_table=11 ##sequence-region PYKI01000997.1 1 237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000997.1 Genbank region 1 237 . + . ID=PYKI01000997.1:1..237;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000997.1 Genbank gene 1 237 . + . ID=gene-C9F07_09105;Name=C9F07_09105;end_range=237,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09105;partial=true;start_range=.,1 PYKI01000997.1 Protein Homology CDS 1 237 . + 1 ID=cds-TGD98845.1;Parent=gene-C9F07_09105;Dbxref=NCBI_GP:TGD98845.1;Name=TGD98845.1;end_range=237,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543403.1;locus_tag=C9F07_09105;partial=true;product=hypothetical protein;protein_id=TGD98845.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002670.1 1 237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002670.1 Genbank region 1 237 . + . ID=PYKI01002670.1:1..237;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01002596.1 1 237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002596.1 Genbank region 1 237 . + . ID=PYKI01002596.1:1..237;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002596.1 Genbank gene 1 237 . - . ID=gene-C9F07_25775;Name=C9F07_25775;end_range=237,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25775;partial=true;start_range=.,1 PYKI01002596.1 Protein Homology CDS 1 237 . - 1 ID=cds-TGD49647.1;Parent=gene-C9F07_25775;Dbxref=NCBI_GP:TGD49647.1;Name=TGD49647.1;end_range=237,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=C9F07_25775;partial=true;product=hypothetical protein;protein_id=TGD49647.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000071.1 1 237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000071.1 Genbank region 1 237 . + . ID=PYKI01000071.1:1..237;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000071.1 Genbank gene 1 237 . + . ID=gene-C9F07_00435;Name=C9F07_00435;end_range=237,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00435;partial=true;start_range=.,1 PYKI01000071.1 Protein Homology CDS 1 237 . + 1 ID=cds-TGE30168.1;Parent=gene-C9F07_00435;Dbxref=NCBI_GP:TGE30168.1;Name=TGE30168.1;Note=required for cellulose biosynthesis;end_range=237,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458298.1;locus_tag=C9F07_00435;partial=true;product=cellulose biosynthesis protein BcsE;protein_id=TGE30168.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002769.1 1 237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002769.1 Genbank region 1 237 . + . ID=PYKI01002769.1:1..237;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002769.1 Genbank gene 34 237 . + . ID=gene-C9F07_27665;Name=C9F07_27665;end_range=237,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27665;partial=true PYKI01002769.1 Protein Homology CDS 34 237 . + 0 ID=cds-TGD46492.1;Parent=gene-C9F07_27665;Dbxref=NCBI_GP:TGD46492.1;Name=TGD46492.1;end_range=237,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519578.1;locus_tag=C9F07_27665;partial=true;product=hypothetical protein;protein_id=TGD46492.1;transl_table=11 ##sequence-region PYKI01001834.1 1 237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001834.1 Genbank region 1 237 . + . ID=PYKI01001834.1:1..237;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01000164.1 1 237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000164.1 Genbank region 1 237 . + . ID=PYKI01000164.1:1..237;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000164.1 Genbank pseudogene 1 167 . - . ID=gene-C9F07_01115;Name=C9F07_01115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01115;pseudo=true PYKI01000164.1 Protein Homology CDS 1 167 . - 0 ID=cds-C9F07_01115;Parent=gene-C9F07_01115;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458579.1;locus_tag=C9F07_01115;product=cytochrome C heme lyase;pseudo=true;transl_table=11 ##sequence-region PYKI01003088.1 1 236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003088.1 Genbank region 1 236 . + . ID=PYKI01003088.1:1..236;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003088.1 Genbank gene 1 236 . + . ID=gene-C9F07_30915;Name=pntA;end_range=236,.;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=C9F07_30915;partial=true;start_range=.,1 PYKI01003088.1 Protein Homology CDS 1 236 . + 2 ID=cds-TGD40084.1;Parent=gene-C9F07_30915;Dbxref=NCBI_GP:TGD40084.1;Name=TGD40084.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;end_range=236,.;gbkey=CDS;gene=pntA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456001.1;locus_tag=C9F07_30915;partial=true;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha;protein_id=TGD40084.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001332.1 1 236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001332.1 Genbank region 1 236 . + . ID=PYKI01001332.1:1..236;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001332.1 Genbank gene 1 236 . + . ID=gene-C9F07_12450;Name=C9F07_12450;end_range=236,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12450;partial=true;start_range=.,1 PYKI01001332.1 Protein Homology CDS 1 236 . + 1 ID=cds-TGD85789.1;Parent=gene-C9F07_12450;Dbxref=NCBI_GP:TGD85789.1;Name=TGD85789.1;end_range=236,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=C9F07_12450;partial=true;product=hypothetical protein;protein_id=TGD85789.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000037.1 1 236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000037.1 Genbank region 1 236 . + . ID=PYKI01000037.1:1..236;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000037.1 Genbank gene 1 236 . - . ID=gene-C9F07_00210;Name=C9F07_00210;end_range=236,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00210;partial=true;start_range=.,1 PYKI01000037.1 Protein Homology CDS 1 236 . - 1 ID=cds-TGE30200.1;Parent=gene-C9F07_00210;Dbxref=NCBI_GP:TGE30200.1;Name=TGE30200.1;end_range=236,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457732.1;locus_tag=C9F07_00210;partial=true;product=cation transporter;protein_id=TGE30200.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002003.1 1 2738 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002003.1 Genbank region 1 2738 . + . ID=PYKI01002003.1:1..2738;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002003.1 Genbank pseudogene 39 416 . - . ID=gene-C9F07_19305;Name=C9F07_19305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19305;pseudo=true PYKI01002003.1 Protein Homology CDS 39 416 . - 0 ID=cds-C9F07_19305;Parent=gene-C9F07_19305;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=C9F07_19305;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;pseudo=true;transl_table=11 PYKI01002003.1 Genbank gene 618 1412 . - . ID=gene-C9F07_19310;Name=C9F07_19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19310 PYKI01002003.1 Protein Homology CDS 618 1412 . - 0 ID=cds-TGD60142.1;Parent=gene-C9F07_19310;Dbxref=NCBI_GP:TGD60142.1;Name=TGD60142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=C9F07_19310;product=polysaccharide biosynthesis protein GumN;protein_id=TGD60142.1;transl_table=11 PYKI01002003.1 Genbank gene 1498 2325 . - . ID=gene-C9F07_19315;Name=C9F07_19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19315 PYKI01002003.1 Protein Homology CDS 1498 2325 . - 0 ID=cds-TGD60143.1;Parent=gene-C9F07_19315;Dbxref=NCBI_GP:TGD60143.1;Name=TGD60143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=C9F07_19315;product=DUF1311 domain-containing protein;protein_id=TGD60143.1;transl_table=11 PYKI01002003.1 Genbank gene 2478 2738 . - . ID=gene-C9F07_19320;Name=C9F07_19320;end_range=2738,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19320;partial=true PYKI01002003.1 Protein Homology CDS 2478 2738 . - 0 ID=cds-TGD60144.1;Parent=gene-C9F07_19320;Dbxref=NCBI_GP:TGD60144.1;Name=TGD60144.1;end_range=2738,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455093.1;locus_tag=C9F07_19320;partial=true;product=hypothetical protein;protein_id=TGD60144.1;transl_table=11 ##sequence-region PYKI01000046.1 1 236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000046.1 Genbank region 1 236 . + . ID=PYKI01000046.1:1..236;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000046.1 Genbank pseudogene 78 236 . + . ID=gene-C9F07_00255;Name=C9F07_00255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00255;pseudo=true PYKI01000046.1 Protein Homology CDS 78 236 . + 0 ID=cds-C9F07_00255;Parent=gene-C9F07_00255;Note=lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457790.1;locus_tag=C9F07_00255;product=lysophospholipase;pseudo=true;transl_table=11 ##sequence-region PYKI01000094.1 1 236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000094.1 Genbank region 1 236 . + . ID=PYKI01000094.1:1..236;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000094.1 Genbank gene 1 236 . - . ID=gene-C9F07_00610;Name=C9F07_00610;end_range=236,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00610;partial=true;start_range=.,1 PYKI01000094.1 Protein Homology CDS 1 236 . - 0 ID=cds-TGE30141.1;Parent=gene-C9F07_00610;Dbxref=NCBI_GP:TGE30141.1;Name=TGE30141.1;end_range=236,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456650.1;locus_tag=C9F07_00610;partial=true;product=colanic acid exporter;protein_id=TGE30141.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002415.1 1 236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002415.1 Genbank region 1 236 . + . ID=PYKI01002415.1:1..236;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002415.1 Genbank pseudogene 39 167 . - . ID=gene-C9F07_23880;Name=C9F07_23880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23880;pseudo=true PYKI01002415.1 Protein Homology CDS 39 167 . - 0 ID=cds-C9F07_23880;Parent=gene-C9F07_23880;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458941.1;locus_tag=C9F07_23880;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01003139.1 1 236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003139.1 Genbank region 1 236 . + . ID=PYKI01003139.1:1..236;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003139.1 Genbank gene 59 236 . - . ID=gene-C9F07_31425;Name=C9F07_31425;end_range=236,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31425;partial=true PYKI01003139.1 Protein Homology CDS 59 236 . - 1 ID=cds-TGD38734.1;Parent=gene-C9F07_31425;Dbxref=NCBI_GP:TGD38734.1;Name=TGD38734.1;end_range=236,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004592123.1;locus_tag=C9F07_31425;partial=true;product=hypothetical protein;protein_id=TGD38734.1;transl_table=11 ##sequence-region PYKI01001809.1 1 236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001809.1 Genbank region 1 236 . + . ID=PYKI01001809.1:1..236;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01002297.1 1 235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002297.1 Genbank region 1 235 . + . ID=PYKI01002297.1:1..235;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002297.1 Genbank pseudogene 11 235 . + . ID=gene-C9F07_22545;Name=C9F07_22545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22545;pseudo=true PYKI01002297.1 Protein Homology CDS 11 235 . + 0 ID=cds-C9F07_22545;Parent=gene-C9F07_22545;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455625.1;locus_tag=C9F07_22545;product=N-acetylneuraminic acid mutarotase;pseudo=true;transl_table=11 ##sequence-region PYKI01000171.1 1 235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000171.1 Genbank region 1 235 . + . ID=PYKI01000171.1:1..235;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000171.1 Genbank gene 1 182 . + . ID=gene-C9F07_01165;Name=C9F07_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01165;partial=true;start_range=.,1 PYKI01000171.1 Protein Homology CDS 1 182 . + 2 ID=cds-TGE30056.1;Parent=gene-C9F07_01165;Dbxref=NCBI_GP:TGE30056.1;Name=TGE30056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527926.1;locus_tag=C9F07_01165;partial=true;product=hypothetical protein;protein_id=TGE30056.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002496.1 1 235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002496.1 Genbank region 1 235 . + . ID=PYKI01002496.1:1..235;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002496.1 Genbank gene 1 235 . - . ID=gene-C9F07_24695;Name=C9F07_24695;end_range=235,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24695;partial=true;start_range=.,1 PYKI01002496.1 Protein Homology CDS 1 235 . - 0 ID=cds-TGD50325.1;Parent=gene-C9F07_24695;Dbxref=NCBI_GP:TGD50325.1;Name=TGD50325.1;end_range=235,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=C9F07_24695;partial=true;product=transcriptional regulator;protein_id=TGD50325.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001448.1 1 235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001448.1 Genbank region 1 235 . + . ID=PYKI01001448.1:1..235;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001448.1 Genbank gene 1 235 . - . ID=gene-C9F07_13720;Name=potE;end_range=235,.;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=C9F07_13720;partial=true;start_range=.,1 PYKI01001448.1 Protein Homology CDS 1 235 . - 2 ID=cds-TGD83675.1;Parent=gene-C9F07_13720;Dbxref=NCBI_GP:TGD83675.1;Name=TGD83675.1;Note=catalyzes the uptake of putrescine via a proton symport mechanism%2C as well as the efflux of putrescine by a putrescine/ornithine antiport system;end_range=235,.;gbkey=CDS;gene=potE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455261.1;locus_tag=C9F07_13720;partial=true;product=putrescine-ornithine antiporter;protein_id=TGD83675.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000018.1 1 235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000018.1 Genbank region 1 235 . + . ID=PYKI01000018.1:1..235;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000018.1 Genbank pseudogene 1 193 . - . ID=gene-C9F07_00100;Name=C9F07_00100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00100;pseudo=true PYKI01000018.1 Protein Homology CDS 1 193 . - 0 ID=cds-C9F07_00100;Parent=gene-C9F07_00100;Note=DNA-binding%3B binds the RcnA promotor%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457418.1;locus_tag=C9F07_00100;product=transcriptional repressor RcnR to maintain nickel and cobalt homeostasis;pseudo=true;transl_table=11 ##sequence-region PYKI01001027.1 1 2735 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001027.1 Genbank region 1 2735 . + . ID=PYKI01001027.1:1..2735;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001027.1 Genbank gene 80 1378 . - . ID=gene-C9F07_09465;Name=C9F07_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09465 PYKI01001027.1 Protein Homology CDS 80 1378 . - 0 ID=cds-TGD97269.1;Parent=gene-C9F07_09465;Dbxref=NCBI_GP:TGD97269.1;Name=TGD97269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457012.1;locus_tag=C9F07_09465;product=penicillin binding protein PBP4B;protein_id=TGD97269.1;transl_table=11 PYKI01001027.1 Genbank gene 1582 2157 . + . ID=gene-C9F07_09470;Name=C9F07_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09470 PYKI01001027.1 Protein Homology CDS 1582 2157 . + 0 ID=cds-TGD97270.1;Parent=gene-C9F07_09470;Dbxref=NCBI_GP:TGD97270.1;Name=TGD97270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457011.1;locus_tag=C9F07_09470;product=GDP-mannose pyrophosphatase NudK;protein_id=TGD97270.1;transl_table=11 PYKI01001027.1 Genbank gene 2282 2735 . + . ID=gene-C9F07_09475;Name=C9F07_09475;end_range=2735,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09475;partial=true PYKI01001027.1 Protein Homology CDS 2282 2735 . + 0 ID=cds-TGD97271.1;Parent=gene-C9F07_09475;Dbxref=NCBI_GP:TGD97271.1;Name=TGD97271.1;end_range=2735,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=C9F07_09475;partial=true;product=DUF1176 domain-containing protein;protein_id=TGD97271.1;transl_table=11 ##sequence-region PYKI01000446.1 1 235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000446.1 Genbank region 1 235 . + . ID=PYKI01000446.1:1..235;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000446.1 Genbank gene 1 235 . + . ID=gene-C9F07_03450;Name=C9F07_03450;end_range=235,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03450;partial=true;start_range=.,1 PYKI01000446.1 Protein Homology CDS 1 235 . + 1 ID=cds-TGE19986.1;Parent=gene-C9F07_03450;Dbxref=NCBI_GP:TGE19986.1;Name=TGE19986.1;Note=similar to flap endonuclease%3B FEN family%3B protein from E. coli does not have exonuclease activity;end_range=235,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461892.3;locus_tag=C9F07_03450;partial=true;product=flap endonuclease Xni;protein_id=TGE19986.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000187.1 1 234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000187.1 Genbank region 1 234 . + . ID=PYKI01000187.1:1..234;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000187.1 Genbank gene 1 234 . + . ID=gene-C9F07_01265;Name=C9F07_01265;end_range=234,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01265;partial=true;start_range=.,1 PYKI01000187.1 Protein Homology CDS 1 234 . + 2 ID=cds-TGE30038.1;Parent=gene-C9F07_01265;Dbxref=NCBI_GP:TGE30038.1;Name=TGE30038.1;end_range=234,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=C9F07_01265;partial=true;product=MFS transporter;protein_id=TGE30038.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001528.1 1 234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001528.1 Genbank region 1 234 . + . ID=PYKI01001528.1:1..234;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001528.1 Genbank gene 1 234 . - . ID=gene-C9F07_14590;Name=C9F07_14590;end_range=234,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14590;partial=true;start_range=.,1 PYKI01001528.1 Protein Homology CDS 1 234 . - 0 ID=cds-TGD76358.1;Parent=gene-C9F07_14590;Dbxref=NCBI_GP:TGD76358.1;Name=TGD76358.1;Note=catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate;end_range=234,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455025.1;locus_tag=C9F07_14590;partial=true;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=TGD76358.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000122.1 1 234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000122.1 Genbank region 1 234 . + . ID=PYKI01000122.1:1..234;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000122.1 Genbank gene 1 234 . + . ID=gene-C9F07_00825;Name=C9F07_00825;end_range=234,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00825;partial=true;start_range=.,1 PYKI01000122.1 Protein Homology CDS 1 234 . + 0 ID=cds-TGE30104.1;Parent=gene-C9F07_00825;Dbxref=NCBI_GP:TGE30104.1;Name=TGE30104.1;Note=with UspC and UspD is involved in resistance to UV irradiation;end_range=234,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=C9F07_00825;partial=true;product=universal stress protein UspE;protein_id=TGE30104.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002725.1 1 234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002725.1 Genbank region 1 234 . + . ID=PYKI01002725.1:1..234;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002725.1 Genbank gene 1 234 . + . ID=gene-C9F07_27205;Name=C9F07_27205;end_range=234,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27205;partial=true;start_range=.,1 PYKI01002725.1 Protein Homology CDS 1 234 . + 2 ID=cds-TGD47543.1;Parent=gene-C9F07_27205;Dbxref=NCBI_GP:TGD47543.1;Name=TGD47543.1;Note=WcaJ%3B glucose-1-phosphate transferase responsible for the addition of the first glucose-1-phosphate from UDP-glucose to the lipid carrier undecaprenyl phosphate in the biosynthesis of colanic acid;end_range=234,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=C9F07_27205;partial=true;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=TGD47543.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000735.1 1 234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000735.1 Genbank region 1 234 . + . ID=PYKI01000735.1:1..234;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000735.1 Genbank gene 1 234 . - . ID=gene-C9F07_06460;Name=cobU;end_range=234,.;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=C9F07_06460;partial=true;start_range=.,1 PYKI01000735.1 Protein Homology CDS 1 234 . - 1 ID=cds-TGE10898.1;Parent=gene-C9F07_06460;Dbxref=NCBI_GP:TGE10898.1;Name=TGE10898.1;Note=catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP;end_range=234,.;gbkey=CDS;gene=cobU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456572.1;locus_tag=C9F07_06460;partial=true;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=TGE10898.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000448.1 1 234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000448.1 Genbank region 1 234 . + . ID=PYKI01000448.1:1..234;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000448.1 Genbank gene 1 234 . - . ID=gene-C9F07_03460;Name=C9F07_03460;end_range=234,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03460;partial=true;start_range=.,1 PYKI01000448.1 Protein Homology CDS 1 234 . - 1 ID=cds-TGE19984.1;Parent=gene-C9F07_03460;Dbxref=NCBI_GP:TGE19984.1;Name=TGE19984.1;end_range=234,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837149.1;locus_tag=C9F07_03460;partial=true;product=hypothetical protein;protein_id=TGE19984.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000158.1 1 234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000158.1 Genbank region 1 234 . + . ID=PYKI01000158.1:1..234;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01000819.1 1 234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000819.1 Genbank region 1 234 . + . ID=PYKI01000819.1:1..234;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000819.1 Genbank gene 1 234 . - . ID=gene-C9F07_07405;Name=C9F07_07405;end_range=234,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07405;partial=true;start_range=.,1 PYKI01000819.1 Protein Homology CDS 1 234 . - 0 ID=cds-TGE07372.1;Parent=gene-C9F07_07405;Dbxref=NCBI_GP:TGE07372.1;Name=TGE07372.1;end_range=234,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455149.1;locus_tag=C9F07_07405;partial=true;product=hypothetical protein;protein_id=TGE07372.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000035.1 1 234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000035.1 Genbank region 1 234 . + . ID=PYKI01000035.1:1..234;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000035.1 Genbank pseudogene 30 234 . - . ID=gene-C9F07_00200;Name=surE;gbkey=Gene;gene=surE;gene_biotype=pseudogene;locus_tag=C9F07_00200;pseudo=true PYKI01000035.1 Protein Homology CDS 30 234 . - 1 ID=cds-C9F07_00200;Parent=gene-C9F07_00200;Note=broad specificity 5'(3')-nucleotidase and polyphosphatase%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;gene=surE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457316.1;locus_tag=C9F07_00200;product=5'/3'-nucleotidase SurE;pseudo=true;transl_table=11 ##sequence-region PYKI01000638.1 1 2731 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000638.1 Genbank region 1 2731 . + . ID=PYKI01000638.1:1..2731;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000638.1 Genbank gene 1 176 . + . ID=gene-C9F07_05515;Name=C9F07_05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05515;partial=true;start_range=.,1 PYKI01000638.1 Protein Homology CDS 1 176 . + 2 ID=cds-TGE12835.1;Parent=gene-C9F07_05515;Dbxref=NCBI_GP:TGE12835.1;Name=TGE12835.1;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311195.1;locus_tag=C9F07_05515;partial=true;product=NADH-quinone oxidoreductase subunit F;protein_id=TGE12835.1;start_range=.,1;transl_table=11 PYKI01000638.1 Genbank pseudogene 201 2726 . + . ID=gene-C9F07_05520;Name=C9F07_05520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05520;pseudo=true PYKI01000638.1 Protein Homology CDS 201 2726 . + 0 ID=cds-C9F07_05520;Parent=gene-C9F07_05520;Note=Catalyzes the transfer of electrons from NADH to quinone%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456865.1;locus_tag=C9F07_05520;product=NADH-quinone oxidoreductase subunit G;pseudo=true;transl_table=11 ##sequence-region PYKI01000255.1 1 234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000255.1 Genbank region 1 234 . + . ID=PYKI01000255.1:1..234;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000255.1 Genbank gene 1 234 . + . ID=gene-C9F07_01665;Name=oppD;end_range=234,.;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=C9F07_01665;partial=true;start_range=.,1 PYKI01000255.1 Protein Homology CDS 1 234 . + 0 ID=cds-TGE27854.1;Parent=gene-C9F07_01665;Dbxref=NCBI_GP:TGE27854.1;Name=TGE27854.1;end_range=234,.;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455755.1;locus_tag=C9F07_01665;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGE27854.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000210.1 1 234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000210.1 Genbank region 1 234 . + . ID=PYKI01000210.1:1..234;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000210.1 Genbank pseudogene 1 143 . - . ID=gene-C9F07_01395;Name=C9F07_01395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01395;pseudo=true PYKI01000210.1 Protein Homology CDS 1 143 . - 0 ID=cds-C9F07_01395;Parent=gene-C9F07_01395;Note=with UgpABC is involved in uptake of glycerol-3-phosphate%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458364.1;locus_tag=C9F07_01395;product=glycerol-3-phosphate transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01000618.1 1 234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000618.1 Genbank region 1 234 . + . ID=PYKI01000618.1:1..234;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000618.1 Genbank gene 1 234 . + . ID=gene-C9F07_05315;Name=C9F07_05315;end_range=234,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05315;partial=true;start_range=.,1 PYKI01000618.1 Protein Homology CDS 1 234 . + 0 ID=cds-TGE13825.1;Parent=gene-C9F07_05315;Dbxref=NCBI_GP:TGE13825.1;Name=TGE13825.1;end_range=234,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455783.1;locus_tag=C9F07_05315;partial=true;product=topoisomerase;protein_id=TGE13825.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000059.1 1 233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000059.1 Genbank region 1 233 . + . ID=PYKI01000059.1:1..233;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000059.1 Genbank pseudogene 1 145 . + . ID=gene-C9F07_00355;Name=C9F07_00355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00355;pseudo=true PYKI01000059.1 Protein Homology CDS 1 145 . + 1 ID=cds-C9F07_00355;Parent=gene-C9F07_00355;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458340.1;locus_tag=C9F07_00355;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01003335.1 1 233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003335.1 Genbank region 1 233 . + . ID=PYKI01003335.1:1..233;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003335.1 Genbank gene 1 233 . + . ID=gene-C9F07_33555;Name=C9F07_33555;end_range=233,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33555;partial=true;start_range=.,1 PYKI01003335.1 Protein Homology CDS 1 233 . + 1 ID=cds-TGD35093.1;Parent=gene-C9F07_33555;Dbxref=NCBI_GP:TGD35093.1;Name=TGD35093.1;end_range=233,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000879522.1;locus_tag=C9F07_33555;partial=true;product=hypothetical protein;protein_id=TGD35093.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000131.1 1 233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000131.1 Genbank region 1 233 . + . ID=PYKI01000131.1:1..233;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000131.1 Genbank gene 19 233 . + . ID=gene-C9F07_00895;Name=secY;end_range=233,.;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=C9F07_00895;partial=true PYKI01000131.1 Protein Homology CDS 19 233 . + 0 ID=cds-TGE30093.1;Parent=gene-C9F07_00895;Dbxref=NCBI_GP:TGE30093.1;Name=TGE30093.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;end_range=233,.;gbkey=CDS;gene=secY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=C9F07_00895;partial=true;product=preprotein translocase subunit SecY;protein_id=TGE30093.1;transl_table=11 ##sequence-region PYKI01001337.1 1 233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001337.1 Genbank region 1 233 . + . ID=PYKI01001337.1:1..233;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001337.1 Genbank gene 1 233 . + . ID=gene-C9F07_12475;Name=C9F07_12475;end_range=233,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12475;partial=true;start_range=.,1 PYKI01001337.1 Protein Homology CDS 1 233 . + 0 ID=cds-TGD85762.1;Parent=gene-C9F07_12475;Dbxref=NCBI_GP:TGD85762.1;Name=TGD85762.1;end_range=233,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456815.1;locus_tag=C9F07_12475;partial=true;product=hypothetical protein;protein_id=TGD85762.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000545.1 1 233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000545.1 Genbank region 1 233 . + . ID=PYKI01000545.1:1..233;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000545.1 Genbank pseudogene 17 233 . - . ID=gene-C9F07_04525;Name=C9F07_04525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04525;pseudo=true PYKI01000545.1 Protein Homology CDS 17 233 . - 1 ID=cds-C9F07_04525;Parent=gene-C9F07_04525;Note=catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate%3B also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454964.1;locus_tag=C9F07_04525;product=2-methylcitrate synthase;pseudo=true;transl_table=11 ##sequence-region PYKI01003250.1 1 2729 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003250.1 Genbank region 1 2729 . + . ID=PYKI01003250.1:1..2729;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003250.1 Genbank gene 713 898 . - . ID=gene-C9F07_32705;Name=C9F07_32705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32705 PYKI01003250.1 Protein Homology CDS 713 898 . - 0 ID=cds-TGD36339.1;Parent=gene-C9F07_32705;Dbxref=NCBI_GP:TGD36339.1;Name=TGD36339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001522444.1;locus_tag=C9F07_32705;product=hypothetical protein;protein_id=TGD36339.1;transl_table=11 PYKI01003250.1 Genbank gene 980 2194 . + . ID=gene-C9F07_32710;Name=C9F07_32710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32710 PYKI01003250.1 Protein Homology CDS 980 2194 . + 0 ID=cds-TGD36340.1;Parent=gene-C9F07_32710;Dbxref=NCBI_GP:TGD36340.1;Name=TGD36340.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456873.1;locus_tag=C9F07_32710;product=pyridoxal phosphate-dependent aminotransferase;protein_id=TGD36340.1;transl_table=11 PYKI01003250.1 Genbank gene 2288 2729 . + . ID=gene-C9F07_32715;Name=C9F07_32715;end_range=2729,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32715;partial=true PYKI01003250.1 Protein Homology CDS 2288 2729 . + 0 ID=cds-TGD36341.1;Parent=gene-C9F07_32715;Dbxref=NCBI_GP:TGD36341.1;Name=TGD36341.1;end_range=2729,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=C9F07_32715;partial=true;product=5'-deoxynucleotidase;protein_id=TGD36341.1;transl_table=11 ##sequence-region PYKI01000207.1 1 233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000207.1 Genbank region 1 233 . + . ID=PYKI01000207.1:1..233;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000207.1 Genbank pseudogene 90 233 . + . ID=gene-C9F07_01375;Name=C9F07_01375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01375;pseudo=true PYKI01000207.1 Protein Homology CDS 90 233 . + 0 ID=cds-C9F07_01375;Parent=gene-C9F07_01375;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457725.1;locus_tag=C9F07_01375;product=serine endoprotease DegQ;pseudo=true;transl_table=11 ##sequence-region PYKI01001368.1 1 233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001368.1 Genbank region 1 233 . + . ID=PYKI01001368.1:1..233;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001368.1 Genbank gene 121 233 . + . ID=gene-C9F07_12865;Name=C9F07_12865;end_range=233,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12865;partial=true PYKI01001368.1 Protein Homology CDS 121 233 . + 0 ID=cds-TGD84773.1;Parent=gene-C9F07_12865;Dbxref=NCBI_GP:TGD84773.1;Name=TGD84773.1;end_range=233,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308055.1;locus_tag=C9F07_12865;partial=true;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=TGD84773.1;transl_table=11 ##sequence-region PYKI01000891.1 1 233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000891.1 Genbank region 1 233 . + . ID=PYKI01000891.1:1..233;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000891.1 Genbank gene 1 233 . - . ID=gene-C9F07_08150;Name=C9F07_08150;end_range=233,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08150;partial=true;start_range=.,1 PYKI01000891.1 Protein Homology CDS 1 233 . - 1 ID=cds-TGE03674.1;Parent=gene-C9F07_08150;Dbxref=NCBI_GP:TGE03674.1;Name=TGE03674.1;end_range=233,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455238.1;locus_tag=C9F07_08150;partial=true;product=hypothetical protein;protein_id=TGE03674.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001899.1 1 232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001899.1 Genbank region 1 232 . + . ID=PYKI01001899.1:1..232;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001899.1 Genbank gene 1 232 . - . ID=gene-C9F07_18300;Name=C9F07_18300;end_range=232,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18300;partial=true;start_range=.,1 PYKI01001899.1 Protein Homology CDS 1 232 . - 2 ID=cds-TGD61577.1;Parent=gene-C9F07_18300;Dbxref=NCBI_GP:TGD61577.1;Name=TGD61577.1;end_range=232,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458973.1;locus_tag=C9F07_18300;partial=true;product=molecular chaperone OsmY;protein_id=TGD61577.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000657.1 1 232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000657.1 Genbank region 1 232 . + . ID=PYKI01000657.1:1..232;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000657.1 Genbank pseudogene 36 203 . - . ID=gene-C9F07_05725;Name=C9F07_05725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05725;pseudo=true PYKI01000657.1 Protein Homology CDS 36 203 . - 0 ID=cds-C9F07_05725;Parent=gene-C9F07_05725;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231138.1;locus_tag=C9F07_05725;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000099.1 1 232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000099.1 Genbank region 1 232 . + . ID=PYKI01000099.1:1..232;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000099.1 Genbank gene 1 104 . - . ID=gene-C9F07_00635;Name=C9F07_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00635;partial=true;start_range=.,1 PYKI01000099.1 Protein Homology CDS 1 104 . - 0 ID=cds-TGE30136.1;Parent=gene-C9F07_00635;Dbxref=NCBI_GP:TGE30136.1;Name=TGE30136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418799.1;locus_tag=C9F07_00635;partial=true;product=hypothetical protein;protein_id=TGE30136.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002127.1 1 210 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002127.1 Genbank region 1 210 . + . ID=PYKI01002127.1:1..210;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002127.1 Genbank gene 29 210 . + . ID=gene-C9F07_20585;Name=C9F07_20585;end_range=210,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20585;partial=true PYKI01002127.1 Protein Homology CDS 29 210 . + 0 ID=cds-TGD58308.1;Parent=gene-C9F07_20585;Dbxref=NCBI_GP:TGD58308.1;Name=TGD58308.1;Note=DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides;end_range=210,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806899.1;locus_tag=C9F07_20585;partial=true;product=ABC transporter substrate-binding protein;protein_id=TGD58308.1;transl_table=11 ##sequence-region PYKI01003085.1 1 232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003085.1 Genbank region 1 232 . + . ID=PYKI01003085.1:1..232;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003085.1 Genbank gene 1 232 . + . ID=gene-C9F07_30890;Name=C9F07_30890;end_range=232,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30890;partial=true;start_range=.,1 PYKI01003085.1 Protein Homology CDS 1 232 . + 0 ID=cds-TGD40094.1;Parent=gene-C9F07_30890;Dbxref=NCBI_GP:TGD40094.1;Name=TGD40094.1;end_range=232,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=C9F07_30890;partial=true;product=hypothetical protein;protein_id=TGD40094.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000038.1 1 232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000038.1 Genbank region 1 232 . + . ID=PYKI01000038.1:1..232;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000038.1 Genbank gene 1 232 . + . ID=gene-C9F07_00215;Name=C9F07_00215;end_range=232,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00215;partial=true;start_range=.,1 PYKI01000038.1 Protein Homology CDS 1 232 . + 1 ID=cds-TGE30199.1;Parent=gene-C9F07_00215;Dbxref=NCBI_GP:TGE30199.1;Name=TGE30199.1;end_range=232,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458552.1;locus_tag=C9F07_00215;partial=true;product=hypothetical protein;protein_id=TGE30199.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000192.1 1 232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000192.1 Genbank region 1 232 . + . ID=PYKI01000192.1:1..232;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000192.1 Genbank pseudogene 1 232 . + . ID=gene-C9F07_01300;Name=C9F07_01300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01300;pseudo=true PYKI01000192.1 Protein Homology CDS 1 232 . + 0 ID=cds-C9F07_01300;Parent=gene-C9F07_01300;Note=inducible%2C catalyzes the hydrolysis of alkylated DNA%2C releasing 3-methyladenine%2C 3-methylguanine%2C 7-methylguanine and 7-methyladenine%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456670.1;locus_tag=C9F07_01300;product=DNA-3-methyladenine glycosylase 2;pseudo=true;transl_table=11 ##sequence-region PYKI01003457.1 1 232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003457.1 Genbank region 1 232 . + . ID=PYKI01003457.1:1..232;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003457.1 Genbank gene 1 232 . - . ID=gene-C9F07_34760;Name=C9F07_34760;end_range=232,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34760;partial=true;start_range=.,1 PYKI01003457.1 Protein Homology CDS 1 232 . - 1 ID=cds-TGD33368.1;Parent=gene-C9F07_34760;Dbxref=NCBI_GP:TGD33368.1;Name=TGD33368.1;end_range=232,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=C9F07_34760;partial=true;product=hypothetical protein;protein_id=TGD33368.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000539.1 1 231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000539.1 Genbank region 1 231 . + . ID=PYKI01000539.1:1..231;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000539.1 Genbank gene 1 231 . + . ID=gene-C9F07_04475;Name=C9F07_04475;end_range=231,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04475;partial=true;start_range=.,1 PYKI01000539.1 Protein Homology CDS 1 231 . + 1 ID=cds-TGE15637.1;Parent=gene-C9F07_04475;Dbxref=NCBI_GP:TGE15637.1;Name=TGE15637.1;end_range=231,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457711.1;locus_tag=C9F07_04475;partial=true;product=DUF1016 domain-containing protein;protein_id=TGE15637.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000226.1 1 231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000226.1 Genbank region 1 231 . + . ID=PYKI01000226.1:1..231;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa ##sequence-region PYKI01003114.1 1 231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003114.1 Genbank region 1 231 . + . ID=PYKI01003114.1:1..231;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003114.1 Genbank pseudogene 71 231 . - . ID=gene-C9F07_31150;Name=C9F07_31150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31150;pseudo=true PYKI01003114.1 Protein Homology CDS 71 231 . - 2 ID=cds-C9F07_31150;Parent=gene-C9F07_31150;Note=with EutC catalyzes the formation of acetaldehyde and ammonia from ethanolamine%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=C9F07_31150;product=ethanolamine ammonia lyase large subunit;pseudo=true;transl_table=11 ##sequence-region PYKI01000087.1 1 231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000087.1 Genbank region 1 231 . + . ID=PYKI01000087.1:1..231;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000087.1 Genbank gene 1 231 . + . ID=gene-C9F07_00550;Name=truB;end_range=231,.;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=C9F07_00550;partial=true;start_range=.,1 PYKI01000087.1 Protein Homology CDS 1 231 . + 2 ID=cds-TGE30149.1;Parent=gene-C9F07_00550;Dbxref=NCBI_GP:TGE30149.1;Name=TGE30149.1;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;end_range=231,.;gbkey=CDS;gene=truB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=C9F07_00550;partial=true;product=tRNA pseudouridine(55) synthase TruB;protein_id=TGE30149.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001317.1 1 2727 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001317.1 Genbank region 1 2727 . + . ID=PYKI01001317.1:1..2727;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001317.1 Genbank gene 1 344 . + . ID=gene-C9F07_12325;Name=C9F07_12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12325;partial=true;start_range=.,1 PYKI01001317.1 Protein Homology CDS 1 344 . + 2 ID=cds-TGD86211.1;Parent=gene-C9F07_12325;Dbxref=NCBI_GP:TGD86211.1;Name=TGD86211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457102.1;locus_tag=C9F07_12325;partial=true;product=oxidoreductase;protein_id=TGD86211.1;start_range=.,1;transl_table=11 PYKI01001317.1 Genbank pseudogene 383 1114 . - . ID=gene-C9F07_12330;Name=C9F07_12330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12330;pseudo=true PYKI01001317.1 Protein Homology CDS 383 1114 . - 0 ID=cds-C9F07_12330;Parent=gene-C9F07_12330;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=C9F07_12330;product=MurR/RpiR family transcriptional regulator;pseudo=true;transl_table=11 PYKI01001317.1 Genbank pseudogene 1106 1774 . + . ID=gene-C9F07_12335;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=pseudogene;locus_tag=C9F07_12335;pseudo=true PYKI01001317.1 Protein Homology CDS 1106 1774 . + 0 ID=cds-C9F07_12335;Parent=gene-C9F07_12335;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455801.1;locus_tag=C9F07_12335;product=peptide ABC transporter ATP-binding protein SapD;pseudo=true;transl_table=11 PYKI01001317.1 Genbank gene 1776 2582 . + . ID=gene-C9F07_12340;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=C9F07_12340 PYKI01001317.1 Protein Homology CDS 1776 2582 . + 0 ID=cds-TGD86212.1;Parent=gene-C9F07_12340;Dbxref=NCBI_GP:TGD86212.1;Name=TGD86212.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=C9F07_12340;product=peptide ABC transporter ATP-binding protein SapF;protein_id=TGD86212.1;transl_table=11 PYKI01001317.1 Genbank gene 2598 2727 . - . ID=gene-C9F07_12345;Name=C9F07_12345;end_range=2727,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12345;partial=true PYKI01001317.1 Protein Homology CDS 2598 2727 . - 1 ID=cds-TGD86213.1;Parent=gene-C9F07_12345;Dbxref=NCBI_GP:TGD86213.1;Name=TGD86213.1;end_range=2727,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455799.1;locus_tag=C9F07_12345;partial=true;product=diguanylate phosphodiesterase;protein_id=TGD86213.1;transl_table=11 ##sequence-region PYKI01000184.1 1 231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000184.1 Genbank region 1 231 . + . ID=PYKI01000184.1:1..231;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000184.1 Genbank gene 1 173 . - . ID=gene-C9F07_01245;Name=C9F07_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01245;partial=true;start_range=.,1 PYKI01000184.1 Protein Homology CDS 1 173 . - 0 ID=cds-TGE30042.1;Parent=gene-C9F07_01245;Dbxref=NCBI_GP:TGE30042.1;Name=TGE30042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751756.1;locus_tag=C9F07_01245;partial=true;product=aminoacetone oxidase family FAD-binding enzyme;protein_id=TGE30042.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000472.1 1 230 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000472.1 Genbank region 1 230 . + . ID=PYKI01000472.1:1..230;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000472.1 Genbank gene 28 230 . + . ID=gene-C9F07_03755;Name=C9F07_03755;end_range=230,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03755;partial=true PYKI01000472.1 Protein Homology CDS 28 230 . + 0 ID=cds-TGE19601.1;Parent=gene-C9F07_03755;Dbxref=NCBI_GP:TGE19601.1;Name=TGE19601.1;end_range=230,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458341.1;locus_tag=C9F07_03755;partial=true;product=hypothetical protein;protein_id=TGE19601.1;transl_table=11 ##sequence-region PYKI01000040.1 1 230 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000040.1 Genbank region 1 230 . + . ID=PYKI01000040.1:1..230;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000040.1 Genbank pseudogene 79 230 . - . ID=gene-C9F07_00225;Name=C9F07_00225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00225;pseudo=true PYKI01000040.1 Protein Homology CDS 79 230 . - 2 ID=cds-C9F07_00225;Parent=gene-C9F07_00225;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454967.1;locus_tag=C9F07_00225;product=porphobilinogen synthase;pseudo=true;transl_table=11 ##sequence-region PYKI01000078.1 1 230 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000078.1 Genbank region 1 230 . + . ID=PYKI01000078.1:1..230;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000078.1 Genbank gene 1 230 . + . ID=gene-C9F07_00490;Name=C9F07_00490;end_range=230,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00490;partial=true;start_range=.,1 PYKI01000078.1 Protein Homology CDS 1 230 . + 0 ID=cds-TGE30159.1;Parent=gene-C9F07_00490;Dbxref=NCBI_GP:TGE30159.1;Name=TGE30159.1;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;end_range=230,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456489.1;locus_tag=C9F07_00490;partial=true;product=flagellar motor stator protein MotA;protein_id=TGE30159.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000076.1 1 230 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000076.1 Genbank region 1 230 . + . ID=PYKI01000076.1:1..230;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000076.1 Genbank gene 33 230 . + . ID=gene-C9F07_00470;Name=C9F07_00470;end_range=230,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00470;partial=true PYKI01000076.1 Protein Homology CDS 33 230 . + 0 ID=cds-TGE30163.1;Parent=gene-C9F07_00470;Dbxref=NCBI_GP:TGE30163.1;Name=TGE30163.1;end_range=230,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463276.1;locus_tag=C9F07_00470;partial=true;product=hypothetical protein;protein_id=TGE30163.1;transl_table=11 ##sequence-region PYKI01000889.1 1 230 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000889.1 Genbank region 1 230 . + . ID=PYKI01000889.1:1..230;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000889.1 Genbank gene 1 230 . + . ID=gene-C9F07_08140;Name=C9F07_08140;end_range=230,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08140;partial=true;start_range=.,1 PYKI01000889.1 Protein Homology CDS 1 230 . + 0 ID=cds-TGE03676.1;Parent=gene-C9F07_08140;Dbxref=NCBI_GP:TGE03676.1;Name=TGE03676.1;end_range=230,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455426.1;locus_tag=C9F07_08140;partial=true;product=NADH oxidoreductase;protein_id=TGE03676.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001462.1 1 229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001462.1 Genbank region 1 229 . + . ID=PYKI01001462.1:1..229;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001462.1 Genbank gene 1 229 . + . ID=gene-C9F07_13870;Name=C9F07_13870;end_range=229,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13870;partial=true;start_range=.,1 PYKI01001462.1 Protein Homology CDS 1 229 . + 2 ID=cds-TGD82067.1;Parent=gene-C9F07_13870;Dbxref=NCBI_GP:TGD82067.1;Name=TGD82067.1;end_range=229,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458844.1;locus_tag=C9F07_13870;partial=true;product=hypothetical protein;protein_id=TGD82067.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001464.1 1 229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001464.1 Genbank region 1 229 . + . ID=PYKI01001464.1:1..229;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001464.1 Genbank gene 1 229 . - . ID=gene-C9F07_13890;Name=C9F07_13890;end_range=229,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13890;partial=true;start_range=.,1 PYKI01001464.1 Protein Homology CDS 1 229 . - 2 ID=cds-TGD82063.1;Parent=gene-C9F07_13890;Dbxref=NCBI_GP:TGD82063.1;Name=TGD82063.1;end_range=229,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=C9F07_13890;partial=true;product=hypothetical protein;protein_id=TGD82063.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002943.1 1 229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002943.1 Genbank region 1 229 . + . ID=PYKI01002943.1:1..229;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002943.1 Genbank gene 1 213 . - . ID=gene-C9F07_29490;Name=C9F07_29490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29490;partial=true;start_range=.,1 PYKI01002943.1 Protein Homology CDS 1 213 . - 0 ID=cds-TGD42330.1;Parent=gene-C9F07_29490;Dbxref=NCBI_GP:TGD42330.1;Name=TGD42330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462370.1;locus_tag=C9F07_29490;partial=true;product=hypothetical protein;protein_id=TGD42330.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002967.1 1 229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002967.1 Genbank region 1 229 . + . ID=PYKI01002967.1:1..229;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002967.1 Genbank pseudogene 1 169 . + . ID=gene-C9F07_29740;Name=C9F07_29740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29740;pseudo=true PYKI01002967.1 Protein Homology CDS 1 169 . + 1 ID=cds-C9F07_29740;Parent=gene-C9F07_29740;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458784.1;locus_tag=C9F07_29740;product=glutamate/gamma-aminobutyrate family transporter YjeM;pseudo=true;transl_table=11 ##sequence-region PYKI01001781.1 1 2726 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001781.1 Genbank region 1 2726 . + . ID=PYKI01001781.1:1..2726;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001781.1 Genbank gene 1 413 . + . ID=gene-C9F07_17090;Name=C9F07_17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17090;partial=true;start_range=.,1 PYKI01001781.1 Protein Homology CDS 1 413 . + 2 ID=cds-TGD66826.1;Parent=gene-C9F07_17090;Dbxref=NCBI_GP:TGD66826.1;Name=TGD66826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456326.1;locus_tag=C9F07_17090;partial=true;product=hypothetical protein;protein_id=TGD66826.1;start_range=.,1;transl_table=11 PYKI01001781.1 Genbank gene 392 598 . - . ID=gene-C9F07_17095;Name=C9F07_17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17095 PYKI01001781.1 Protein Homology CDS 392 598 . - 0 ID=cds-TGD66827.1;Parent=gene-C9F07_17095;Dbxref=NCBI_GP:TGD66827.1;Name=TGD66827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664103.1;locus_tag=C9F07_17095;product=hypothetical protein;protein_id=TGD66827.1;transl_table=11 PYKI01001781.1 Genbank gene 618 2303 . + . ID=gene-C9F07_17100;Name=C9F07_17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17100 PYKI01001781.1 Protein Homology CDS 618 2303 . + 0 ID=cds-TGD66828.1;Parent=gene-C9F07_17100;Dbxref=NCBI_GP:TGD66828.1;Name=TGD66828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456325.1;locus_tag=C9F07_17100;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=TGD66828.1;transl_table=11 PYKI01001781.1 Genbank gene 2376 2726 . + . ID=gene-C9F07_17105;Name=C9F07_17105;end_range=2726,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17105;partial=true PYKI01001781.1 Protein Homology CDS 2376 2726 . + 0 ID=cds-TGD66829.1;Parent=gene-C9F07_17105;Dbxref=NCBI_GP:TGD66829.1;Name=TGD66829.1;end_range=2726,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456324.1;locus_tag=C9F07_17105;partial=true;product=ribonuclease D;protein_id=TGD66829.1;transl_table=11 ##sequence-region PYKI01000507.1 1 5771 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000507.1 Genbank region 1 5771 . + . ID=PYKI01000507.1:1..5771;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000507.1 Genbank gene 1 542 . - . ID=gene-C9F07_04130;Name=C9F07_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04130;partial=true;start_range=.,1 PYKI01000507.1 Protein Homology CDS 1 542 . - 0 ID=cds-TGE17046.1;Parent=gene-C9F07_04130;Dbxref=NCBI_GP:TGE17046.1;Name=TGE17046.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=C9F07_04130;partial=true;product=F0F1 ATP synthase subunit A;protein_id=TGE17046.1;start_range=.,1;transl_table=11 PYKI01000507.1 Genbank gene 551 931 . - . ID=gene-C9F07_04135;Name=C9F07_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04135 PYKI01000507.1 Protein Homology CDS 551 931 . - 0 ID=cds-TGE17047.1;Parent=gene-C9F07_04135;Dbxref=NCBI_GP:TGE17047.1;Name=TGE17047.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=C9F07_04135;product=ATP F0F1 synthase subunit I;protein_id=TGE17047.1;transl_table=11 PYKI01000507.1 Genbank gene 1547 2170 . - . ID=gene-C9F07_04140;Name=C9F07_04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04140 PYKI01000507.1 Protein Homology CDS 1547 2170 . - 0 ID=cds-TGE17050.1;Parent=gene-C9F07_04140;Dbxref=NCBI_GP:TGE17050.1;Name=TGE17050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458070.1;locus_tag=C9F07_04140;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=TGE17050.1;transl_table=11 PYKI01000507.1 Genbank gene 2273 4162 . - . ID=gene-C9F07_04145;Name=C9F07_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04145 PYKI01000507.1 Protein Homology CDS 2273 4162 . - 0 ID=cds-TGE17048.1;Parent=gene-C9F07_04145;Dbxref=NCBI_GP:TGE17048.1;Name=TGE17048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=C9F07_04145;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=TGE17048.1;transl_table=11 PYKI01000507.1 Genbank pseudogene 4331 4552 . + . ID=gene-C9F07_04150;Name=C9F07_04150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04150;pseudo=true PYKI01000507.1 Protein Homology CDS 4331 4552 . + 0 ID=cds-C9F07_04150;Parent=gene-C9F07_04150;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017095241.1;locus_tag=C9F07_04150;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000507.1 Genbank gene 4541 4984 . - . ID=gene-C9F07_04155;Name=C9F07_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04155 PYKI01000507.1 Protein Homology CDS 4541 4984 . - 0 ID=cds-TGE17051.1;Parent=gene-C9F07_04155;Dbxref=NCBI_GP:TGE17051.1;Name=TGE17051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458068.1;locus_tag=C9F07_04155;product=FMN-binding protein MioC;protein_id=TGE17051.1;transl_table=11 PYKI01000507.1 Genbank gene 5074 5532 . - . ID=gene-C9F07_04160;Name=C9F07_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04160 PYKI01000507.1 Protein Homology CDS 5074 5532 . - 0 ID=cds-TGE17049.1;Parent=gene-C9F07_04160;Dbxref=NCBI_GP:TGE17049.1;Name=TGE17049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458067.1;locus_tag=C9F07_04160;product=transcriptional regulator AsnC;protein_id=TGE17049.1;transl_table=11 ##sequence-region PYKI01001556.1 1 229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001556.1 Genbank region 1 229 . + . ID=PYKI01001556.1:1..229;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001556.1 Genbank gene 1 229 . - . ID=gene-C9F07_14910;Name=C9F07_14910;end_range=229,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14910;partial=true;start_range=.,1 PYKI01001556.1 Protein Homology CDS 1 229 . - 2 ID=cds-TGD74437.1;Parent=gene-C9F07_14910;Dbxref=NCBI_GP:TGD74437.1;Name=TGD74437.1;end_range=229,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=C9F07_14910;partial=true;product=ABC transporter permease;protein_id=TGD74437.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001242.1 1 229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001242.1 Genbank region 1 229 . + . ID=PYKI01001242.1:1..229;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001242.1 Genbank gene 1 213 . - . ID=gene-C9F07_11585;Name=C9F07_11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11585;partial=true;start_range=.,1 PYKI01001242.1 Protein Homology CDS 1 213 . - 0 ID=cds-TGD90250.1;Parent=gene-C9F07_11585;Dbxref=NCBI_GP:TGD90250.1;Name=TGD90250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535042.1;locus_tag=C9F07_11585;partial=true;product=flagellar M-ring protein FliF;protein_id=TGD90250.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000003.1 1 229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000003.1 Genbank region 1 229 . + . ID=PYKI01000003.1:1..229;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000003.1 Genbank gene 6 229 . + . ID=gene-C9F07_00020;Name=C9F07_00020;end_range=229,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00020;partial=true PYKI01000003.1 Protein Homology CDS 6 229 . + 0 ID=cds-TGE30224.1;Parent=gene-C9F07_00020;Dbxref=NCBI_GP:TGE30224.1;Name=TGE30224.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;end_range=229,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455247.1;locus_tag=C9F07_00020;partial=true;product=glutamine--tRNA ligase;protein_id=TGE30224.1;transl_table=11 ##sequence-region PYKI01003338.1 1 229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003338.1 Genbank region 1 229 . + . ID=PYKI01003338.1:1..229;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003338.1 Genbank gene 1 229 . - . ID=gene-C9F07_33580;Name=fruK;end_range=229,.;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=C9F07_33580;partial=true;start_range=.,1 PYKI01003338.1 Protein Homology CDS 1 229 . - 1 ID=cds-TGD35084.1;Parent=gene-C9F07_33580;Dbxref=NCBI_GP:TGD35084.1;Name=TGD35084.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;end_range=229,.;gbkey=CDS;gene=fruK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311087.1;locus_tag=C9F07_33580;partial=true;product=1-phosphofructokinase;protein_id=TGD35084.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000228.1 1 229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000228.1 Genbank region 1 229 . + . ID=PYKI01000228.1:1..229;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000228.1 Genbank pseudogene 131 229 . - . ID=gene-C9F07_01485;Name=C9F07_01485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_01485;pseudo=true PYKI01000228.1 Protein Homology CDS 131 229 . - 0 ID=cds-C9F07_01485;Parent=gene-C9F07_01485;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312257.1;locus_tag=C9F07_01485;product=SPOR domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001757.1 1 229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001757.1 Genbank region 1 229 . + . ID=PYKI01001757.1:1..229;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001757.1 Genbank gene 1 229 . - . ID=gene-C9F07_16880;Name=hflB;end_range=229,.;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=C9F07_16880;partial=true;start_range=.,1 PYKI01001757.1 Protein Homology CDS 1 229 . - 1 ID=cds-TGD68138.1;Parent=gene-C9F07_16880;Dbxref=NCBI_GP:TGD68138.1;Name=TGD68138.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;end_range=229,.;gbkey=CDS;gene=hflB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=C9F07_16880;partial=true;product=ATP-dependent metalloprotease;protein_id=TGD68138.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000374.1 1 222 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000374.1 Genbank region 1 222 . + . ID=PYKI01000374.1:1..222;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000374.1 Genbank gene 120 222 . + . ID=gene-C9F07_02830;Name=C9F07_02830;end_range=222,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02830;partial=true PYKI01000374.1 Protein Homology CDS 120 222 . + 0 ID=cds-TGE23181.1;Parent=gene-C9F07_02830;Dbxref=NCBI_GP:TGE23181.1;Name=TGE23181.1;end_range=222,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007772075.1;locus_tag=C9F07_02830;partial=true;product=replication initiation protein;protein_id=TGE23181.1;transl_table=11 ##sequence-region PYKI01001718.1 1 2725 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001718.1 Genbank region 1 2725 . + . ID=PYKI01001718.1:1..2725;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001718.1 Genbank gene 1 732 . - . ID=gene-C9F07_16425;Name=C9F07_16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16425;partial=true;start_range=.,1 PYKI01001718.1 Protein Homology CDS 1 732 . - 0 ID=cds-TGD69089.1;Parent=gene-C9F07_16425;Dbxref=NCBI_GP:TGD69089.1;Name=TGD69089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457604.1;locus_tag=C9F07_16425;partial=true;product=NADPH-dependent ferric siderophore reductase;protein_id=TGD69089.1;start_range=.,1;transl_table=11 PYKI01001718.1 Genbank gene 964 1611 . + . ID=gene-C9F07_16430;Name=C9F07_16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16430 PYKI01001718.1 Protein Homology CDS 964 1611 . + 0 ID=cds-TGD69090.1;Parent=gene-C9F07_16430;Dbxref=NCBI_GP:TGD69090.1;Name=TGD69090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=C9F07_16430;product=PadR family transcriptional regulator;protein_id=TGD69090.1;transl_table=11 PYKI01001718.1 Genbank gene 1608 2725 . - . ID=gene-C9F07_16435;Name=C9F07_16435;end_range=2725,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16435;partial=true PYKI01001718.1 Protein Homology CDS 1608 2725 . - 2 ID=cds-TGD69091.1;Parent=gene-C9F07_16435;Dbxref=NCBI_GP:TGD69091.1;Name=TGD69091.1;end_range=2725,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457606.1;locus_tag=C9F07_16435;partial=true;product=methyl-accepting chemotaxis protein;protein_id=TGD69091.1;transl_table=11 ##sequence-region PYKI01000379.1 1 220 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000379.1 Genbank region 1 220 . + . ID=PYKI01000379.1:1..220;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000379.1 Genbank gene 1 59 . + . ID=gene-C9F07_02865;Name=C9F07_02865;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F07_02865;partial=true;start_range=.,1 PYKI01000379.1 Genbank rRNA 1 59 . + . ID=rna-C9F07_02865;Parent=gene-C9F07_02865;gbkey=rRNA;locus_tag=C9F07_02865;partial=true;product=23S ribosomal RNA;start_range=.,1 PYKI01000379.1 Genbank exon 1 59 . + . ID=exon-C9F07_02865-1;Parent=rna-C9F07_02865;gbkey=rRNA;locus_tag=C9F07_02865;partial=true;product=23S ribosomal RNA;start_range=.,1 PYKI01000379.1 Genbank gene 143 220 . + . ID=gene-C9F07_02870;Name=rrf;end_range=220,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C9F07_02870;partial=true PYKI01000379.1 cmsearch rRNA 143 220 . + . ID=rna-C9F07_02870;Parent=gene-C9F07_02870;Dbxref=RFAM:RF00001;end_range=220,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00001,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_02870;partial=true;product=5S ribosomal RNA PYKI01000379.1 cmsearch exon 143 220 . + . ID=exon-C9F07_02870-1;Parent=rna-C9F07_02870;Dbxref=RFAM:RF00001;end_range=220,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00001,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_02870;partial=true;product=5S ribosomal RNA ##sequence-region PYKI01000887.1 1 217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000887.1 Genbank region 1 217 . + . ID=PYKI01000887.1:1..217;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000887.1 Genbank gene 1 213 . + . ID=gene-C9F07_08130;Name=C9F07_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08130;partial=true;start_range=.,1 PYKI01000887.1 Protein Homology CDS 1 213 . + 0 ID=cds-TGE03987.1;Parent=gene-C9F07_08130;Dbxref=NCBI_GP:TGE03987.1;Name=TGE03987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001520314.1;locus_tag=C9F07_08130;partial=true;product=hypothetical protein;protein_id=TGE03987.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000062.1 1 213 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000062.1 Genbank region 1 213 . + . ID=PYKI01000062.1:1..213;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000062.1 Genbank gene 1 76 . + . ID=gene-C9F07_00380;Name=C9F07_00380;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_00380 PYKI01000062.1 tRNAscan-SE tRNA 1 76 . + . ID=rna-C9F07_00380;Parent=gene-C9F07_00380;anticodon=(pos:34..36);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_00380;product=tRNA-Arg PYKI01000062.1 tRNAscan-SE exon 1 76 . + . ID=exon-C9F07_00380-1;Parent=rna-C9F07_00380;anticodon=(pos:34..36);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_00380;product=tRNA-Arg PYKI01000062.1 Genbank gene 138 211 . + . ID=gene-C9F07_00385;Name=C9F07_00385;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_00385 PYKI01000062.1 tRNAscan-SE tRNA 138 211 . + . ID=rna-C9F07_00385;Parent=gene-C9F07_00385;anticodon=(pos:172..174);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_00385;product=tRNA-Arg PYKI01000062.1 tRNAscan-SE exon 138 211 . + . ID=exon-C9F07_00385-1;Parent=rna-C9F07_00385;anticodon=(pos:172..174);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_00385;product=tRNA-Arg ##sequence-region PYKI01000057.1 1 209 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000057.1 Genbank region 1 209 . + . ID=PYKI01000057.1:1..209;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000057.1 Genbank gene 1 179 . - . ID=gene-C9F07_00345;Name=C9F07_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00345;partial=true;start_range=.,1 PYKI01000057.1 Protein Homology CDS 1 179 . - 0 ID=cds-TGE30179.1;Parent=gene-C9F07_00345;Dbxref=NCBI_GP:TGE30179.1;Name=TGE30179.1;Note=structural flagella protein%3B individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella%2C termed phase 1 and phase 2%2C each specified by separate structural genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456520.1;locus_tag=C9F07_00345;partial=true;product=flagellin FliC;protein_id=TGE30179.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002519.1 1 2722 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002519.1 Genbank region 1 2722 . + . ID=PYKI01002519.1:1..2722;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002519.1 Genbank gene 1 305 . - . ID=gene-C9F07_24955;Name=C9F07_24955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24955;partial=true;start_range=.,1 PYKI01002519.1 Protein Homology CDS 1 305 . - 0 ID=cds-TGD50135.1;Parent=gene-C9F07_24955;Dbxref=NCBI_GP:TGD50135.1;Name=TGD50135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458514.1;locus_tag=C9F07_24955;partial=true;product=DeoR/GlpR transcriptional regulator;protein_id=TGD50135.1;start_range=.,1;transl_table=11 PYKI01002519.1 Genbank gene 292 1155 . - . ID=gene-C9F07_24960;Name=C9F07_24960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24960 PYKI01002519.1 Protein Homology CDS 292 1155 . - 0 ID=cds-TGD50136.1;Parent=gene-C9F07_24960;Dbxref=NCBI_GP:TGD50136.1;Name=TGD50136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458515.1;locus_tag=C9F07_24960;product=Cof-type HAD-IIB family hydrolase;protein_id=TGD50136.1;transl_table=11 PYKI01002519.1 Genbank gene 1172 2011 . - . ID=gene-C9F07_24965;Name=C9F07_24965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24965 PYKI01002519.1 Protein Homology CDS 1172 2011 . - 0 ID=cds-TGD50137.1;Parent=gene-C9F07_24965;Dbxref=NCBI_GP:TGD50137.1;Name=TGD50137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458516.1;locus_tag=C9F07_24965;product=histidine biosynthesis protein;protein_id=TGD50137.1;transl_table=11 PYKI01002519.1 Genbank gene 2035 2722 . - . ID=gene-C9F07_24970;Name=C9F07_24970;end_range=2722,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24970;partial=true PYKI01002519.1 Protein Homology CDS 2035 2722 . - 1 ID=cds-TGD50138.1;Parent=gene-C9F07_24970;Dbxref=NCBI_GP:TGD50138.1;Name=TGD50138.1;end_range=2722,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458517.1;locus_tag=C9F07_24970;partial=true;product=PTS sugar transporter;protein_id=TGD50138.1;transl_table=11 ##sequence-region PYKI01001026.1 1 2721 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001026.1 Genbank region 1 2721 . + . ID=PYKI01001026.1:1..2721;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001026.1 Genbank gene 1 326 . + . ID=gene-C9F07_09450;Name=C9F07_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09450;partial=true;start_range=.,1 PYKI01001026.1 Protein Homology CDS 1 326 . + 2 ID=cds-TGD97288.1;Parent=gene-C9F07_09450;Dbxref=NCBI_GP:TGD97288.1;Name=TGD97288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=C9F07_09450;partial=true;product=impE family protein;protein_id=TGD97288.1;start_range=.,1;transl_table=11 PYKI01001026.1 Genbank gene 323 817 . + . ID=gene-C9F07_09455;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=C9F07_09455 PYKI01001026.1 Protein Homology CDS 323 817 . + 0 ID=cds-TGD97289.1;Parent=gene-C9F07_09455;Dbxref=NCBI_GP:TGD97289.1;Name=TGD97289.1;gbkey=CDS;gene=tssE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=C9F07_09455;product=type VI secretion system baseplate subunit TssE;protein_id=TGD97289.1;transl_table=11 PYKI01001026.1 Genbank gene 833 2721 . + . ID=gene-C9F07_09460;Name=vasA;end_range=2721,.;gbkey=Gene;gene=vasA;gene_biotype=protein_coding;locus_tag=C9F07_09460;partial=true PYKI01001026.1 Protein Homology CDS 833 2721 . + 0 ID=cds-TGD97290.1;Parent=gene-C9F07_09460;Dbxref=NCBI_GP:TGD97290.1;Name=TGD97290.1;end_range=2721,.;gbkey=CDS;gene=vasA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=C9F07_09460;partial=true;product=type VI secretion system baseplate subunit TssF;protein_id=TGD97290.1;transl_table=11 ##sequence-region PYKI01003141.1 1 2715 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003141.1 Genbank region 1 2715 . + . ID=PYKI01003141.1:1..2715;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003141.1 Genbank pseudogene 41 484 . - . ID=gene-C9F07_31435;Name=C9F07_31435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31435;pseudo=true PYKI01003141.1 Protein Homology CDS 41 484 . - 0 ID=cds-C9F07_31435;Parent=gene-C9F07_31435;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454759.1;locus_tag=C9F07_31435;product=nicotinate-nucleotide diphosphorylase;pseudo=true;transl_table=11 PYKI01003141.1 Genbank gene 572 1135 . + . ID=gene-C9F07_31440;Name=C9F07_31440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31440 PYKI01003141.1 Protein Homology CDS 572 1135 . + 0 ID=cds-TGD38724.1;Parent=gene-C9F07_31440;Dbxref=NCBI_GP:TGD38724.1;Name=TGD38724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454760.1;locus_tag=C9F07_31440;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=TGD38724.1;transl_table=11 PYKI01003141.1 Genbank gene 1132 1986 . + . ID=gene-C9F07_31445;Name=C9F07_31445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31445 PYKI01003141.1 Protein Homology CDS 1132 1986 . + 0 ID=cds-TGD38725.1;Parent=gene-C9F07_31445;Dbxref=NCBI_GP:TGD38725.1;Name=TGD38725.1;Note=involved in regulation of beta-lactamase%3B putative signaling protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=C9F07_31445;product=beta-lactamase regulator AmpE;protein_id=TGD38725.1;transl_table=11 PYKI01003141.1 Genbank gene 2078 2715 . - . ID=gene-C9F07_31450;Name=C9F07_31450;end_range=2715,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31450;partial=true PYKI01003141.1 Protein Homology CDS 2078 2715 . - 2 ID=cds-TGD38726.1;Parent=gene-C9F07_31450;Dbxref=NCBI_GP:TGD38726.1;Name=TGD38726.1;end_range=2715,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454762.1;locus_tag=C9F07_31450;partial=true;product=alpha-N-arabinofuranosidase;protein_id=TGD38726.1;transl_table=11 ##sequence-region PYKI01000565.1 1 2708 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000565.1 Genbank region 1 2708 . + . ID=PYKI01000565.1:1..2708;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000565.1 Genbank gene 1 718 . - . ID=gene-C9F07_04765;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=C9F07_04765;partial=true;start_range=.,1 PYKI01000565.1 Protein Homology CDS 1 718 . - 0 ID=cds-TGE14733.1;Parent=gene-C9F07_04765;Dbxref=NCBI_GP:TGE14733.1;Name=TGE14733.1;Note=multidrug efflux protein involved in adaptation to low energy shock;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458139.1;locus_tag=C9F07_04765;partial=true;product=multidrug transporter EmrD;protein_id=TGE14733.1;start_range=.,1;transl_table=11 PYKI01000565.1 Genbank gene 921 1781 . - . ID=gene-C9F07_04770;Name=C9F07_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04770 PYKI01000565.1 Protein Homology CDS 921 1781 . - 0 ID=cds-TGE14729.1;Parent=gene-C9F07_04770;Dbxref=NCBI_GP:TGE14729.1;Name=TGE14729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=C9F07_04770;product=EamA family transporter;protein_id=TGE14729.1;transl_table=11 PYKI01000565.1 Genbank gene 1778 1963 . - . ID=gene-C9F07_04775;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=C9F07_04775 PYKI01000565.1 Protein Homology CDS 1778 1963 . - 0 ID=cds-TGE14730.1;Parent=gene-C9F07_04775;Dbxref=NCBI_GP:TGE14730.1;Name=TGE14730.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=C9F07_04775;product=type I toxin-antitoxin system toxin TisB;protein_id=TGE14730.1;transl_table=11 PYKI01000565.1 Genbank pseudogene 1960 2074 . - . ID=gene-C9F07_04780;Name=C9F07_04780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04780;pseudo=true PYKI01000565.1 Protein Homology CDS 1960 2074 . - 0 ID=cds-C9F07_04780;Parent=gene-C9F07_04780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=C9F07_04780;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000565.1 Genbank gene 2419 2610 . - . ID=gene-C9F07_04785;Name=C9F07_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04785 PYKI01000565.1 Protein Homology CDS 2419 2610 . - 0 ID=cds-TGE14731.1;Parent=gene-C9F07_04785;Dbxref=NCBI_GP:TGE14731.1;Name=TGE14731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752280.1;locus_tag=C9F07_04785;product=hypothetical protein;protein_id=TGE14731.1;transl_table=11 PYKI01000565.1 Genbank gene 2597 2695 . + . ID=gene-C9F07_04790;Name=C9F07_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04790 PYKI01000565.1 Protein Homology CDS 2597 2695 . + 0 ID=cds-TGE14732.1;Parent=gene-C9F07_04790;Dbxref=NCBI_GP:TGE14732.1;Name=TGE14732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458140.1;locus_tag=C9F07_04790;product=ilvB operon leader peptide IvbL;protein_id=TGE14732.1;transl_table=11 ##sequence-region PYKI01003190.1 1 2708 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003190.1 Genbank region 1 2708 . + . ID=PYKI01003190.1:1..2708;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003190.1 Genbank gene 1 1410 . - . ID=gene-C9F07_32020;Name=C9F07_32020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32020;partial=true;start_range=.,1 PYKI01003190.1 Protein Homology CDS 1 1410 . - 0 ID=cds-TGD37523.1;Parent=gene-C9F07_32020;Dbxref=NCBI_GP:TGD37523.1;Name=TGD37523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457089.1;locus_tag=C9F07_32020;partial=true;product=lysine decarboxylase CadA;protein_id=TGD37523.1;start_range=.,1;transl_table=11 PYKI01003190.1 Genbank gene 1493 2708 . - . ID=gene-C9F07_32025;Name=cadB;end_range=2708,.;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=C9F07_32025;partial=true PYKI01003190.1 Protein Homology CDS 1493 2708 . - 1 ID=cds-TGD37524.1;Parent=gene-C9F07_32025;Dbxref=NCBI_GP:TGD37524.1;Name=TGD37524.1;Note=antiporter protein responsible for lysine import and cadaverine export%3B member of the lysine-dependent acid resistance system 4 (AR4)%3B inner membrane protein;end_range=2708,.;gbkey=CDS;gene=cadB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=C9F07_32025;partial=true;product=lysine:cadaverine antiporter;protein_id=TGD37524.1;transl_table=11 ##sequence-region PYKI01002561.1 1 2708 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002561.1 Genbank region 1 2708 . + . ID=PYKI01002561.1:1..2708;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002561.1 Genbank gene 1 2121 . + . ID=gene-C9F07_25430;Name=C9F07_25430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25430;partial=true;start_range=.,1 PYKI01002561.1 Protein Homology CDS 1 2121 . + 0 ID=cds-TGD49859.1;Parent=gene-C9F07_25430;Dbxref=NCBI_GP:TGD49859.1;Name=TGD49859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=C9F07_25430;partial=true;product=maltodextrin phosphorylase;protein_id=TGD49859.1;start_range=.,1;transl_table=11 PYKI01002561.1 Genbank gene 2131 2708 . + . ID=gene-C9F07_25435;Name=malQ;end_range=2708,.;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=C9F07_25435;partial=true PYKI01002561.1 Protein Homology CDS 2131 2708 . + 0 ID=cds-TGD49860.1;Parent=gene-C9F07_25435;Dbxref=NCBI_GP:TGD49860.1;Name=TGD49860.1;Note=amylomaltase%3B acts to release glucose from maltodextrins;end_range=2708,.;gbkey=CDS;gene=malQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=C9F07_25435;partial=true;product=4-alpha-glucanotransferase;protein_id=TGD49860.1;transl_table=11 ##sequence-region PYKI01003576.1 1 2708 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003576.1 Genbank region 1 2708 . + . ID=PYKI01003576.1:1..2708;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003576.1 Genbank gene 1 390 . - . ID=gene-C9F07_36095;Name=C9F07_36095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36095;partial=true;start_range=.,1 PYKI01003576.1 Protein Homology CDS 1 390 . - 0 ID=cds-TGD30150.1;Parent=gene-C9F07_36095;Dbxref=NCBI_GP:TGD30150.1;Name=TGD30150.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455432.1;locus_tag=C9F07_36095;partial=true;product=macrolide ABC transporter permease/ATP-binding protein MacB;protein_id=TGD30150.1;start_range=.,1;transl_table=11 PYKI01003576.1 Genbank gene 387 1505 . - . ID=gene-C9F07_36100;Name=C9F07_36100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36100 PYKI01003576.1 Protein Homology CDS 387 1505 . - 0 ID=cds-TGD30151.1;Parent=gene-C9F07_36100;Dbxref=NCBI_GP:TGD30151.1;Name=TGD30151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=C9F07_36100;product=macrolide transporter subunit MacA;protein_id=TGD30151.1;transl_table=11 PYKI01003576.1 Genbank gene 1633 2601 . + . ID=gene-C9F07_36105;Name=C9F07_36105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36105 PYKI01003576.1 Protein Homology CDS 1633 2601 . + 0 ID=cds-TGD30152.1;Parent=gene-C9F07_36105;Dbxref=NCBI_GP:TGD30152.1;Name=TGD30152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459917.1;locus_tag=C9F07_36105;product=DUF535 domain-containing protein;protein_id=TGD30152.1;transl_table=11 ##sequence-region PYKI01000774.1 1 2705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000774.1 Genbank region 1 2705 . + . ID=PYKI01000774.1:1..2705;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000774.1 Genbank pseudogene 76 771 . - . ID=gene-C9F07_06895;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=pseudogene;locus_tag=C9F07_06895;pseudo=true PYKI01000774.1 Protein Homology CDS 76 771 . - 0 ID=cds-C9F07_06895;Parent=gene-C9F07_06895;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=mrdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=C9F07_06895;product=serine-type D-Ala-D-Ala carboxypeptidase MrdA;pseudo=true;transl_table=11 PYKI01000774.1 Genbank gene 960 2687 . - . ID=gene-C9F07_06900;Name=C9F07_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06900 PYKI01000774.1 Protein Homology CDS 960 2687 . - 0 ID=cds-TGE09199.1;Parent=gene-C9F07_06900;Dbxref=NCBI_GP:TGE09199.1;Name=TGE09199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=C9F07_06900;product=arginine--tRNA ligase;protein_id=TGE09199.1;transl_table=11 ##sequence-region PYKI01002808.1 1 2698 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002808.1 Genbank region 1 2698 . + . ID=PYKI01002808.1:1..2698;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002808.1 Genbank pseudogene 13 657 . - . ID=gene-C9F07_28135;Name=C9F07_28135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28135;pseudo=true PYKI01002808.1 Protein Homology CDS 13 657 . - 0 ID=cds-C9F07_28135;Parent=gene-C9F07_28135;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=C9F07_28135;product=metal ABC transporter substrate-binding protein;pseudo=true;transl_table=11 PYKI01002808.1 Genbank gene 914 2047 . - . ID=gene-C9F07_28140;Name=C9F07_28140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28140 PYKI01002808.1 Protein Homology CDS 914 2047 . - 0 ID=cds-TGD45745.1;Parent=gene-C9F07_28140;Dbxref=NCBI_GP:TGD45745.1;Name=TGD45745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=C9F07_28140;product=porin;protein_id=TGD45745.1;transl_table=11 PYKI01002808.1 Genbank gene 2233 2698 . - . ID=gene-C9F07_28145;Name=C9F07_28145;end_range=2698,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28145;partial=true PYKI01002808.1 Protein Homology CDS 2233 2698 . - 1 ID=cds-TGD45746.1;Parent=gene-C9F07_28145;Dbxref=NCBI_GP:TGD45746.1;Name=TGD45746.1;end_range=2698,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=C9F07_28145;partial=true;product=ABC transporter permease;protein_id=TGD45746.1;transl_table=11 ##sequence-region PYKI01000587.1 1 5765 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000587.1 Genbank region 1 5765 . + . ID=PYKI01000587.1:1..5765;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000587.1 Genbank gene 1 2702 . + . ID=gene-C9F07_04985;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=C9F07_04985;partial=true;start_range=.,1 PYKI01000587.1 Protein Homology CDS 1 2702 . + 2 ID=cds-TGE14301.1;Parent=gene-C9F07_04985;Dbxref=NCBI_GP:TGE14301.1;Name=TGE14301.1;gbkey=CDS;gene=rpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457917.1;locus_tag=C9F07_04985;partial=true;product=DNA-directed RNA polymerase subunit beta;protein_id=TGE14301.1;start_range=.,1;transl_table=11 PYKI01000587.1 Genbank pseudogene 2779 5754 . + . ID=gene-C9F07_04990;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=pseudogene;locus_tag=C9F07_04990;pseudo=true PYKI01000587.1 Protein Homology CDS 2779 5754 . + 0 ID=cds-C9F07_04990;Parent=gene-C9F07_04990;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=rpoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457916.1;locus_tag=C9F07_04990;product=DNA-directed RNA polymerase subunit beta';pseudo=true;transl_table=11 ##sequence-region PYKI01002405.1 1 10694 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002405.1 Genbank region 1 10694 . + . ID=PYKI01002405.1:1..10694;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002405.1 Genbank pseudogene 1 879 . + . ID=gene-C9F07_23710;Name=C9F07_23710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23710;pseudo=true PYKI01002405.1 Protein Homology CDS 1 879 . + 0 ID=cds-C9F07_23710;Parent=gene-C9F07_23710;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458990.3;locus_tag=C9F07_23710;product=murein transglycosylase;pseudo=true;transl_table=11 PYKI01002405.1 Genbank gene 937 1263 . + . ID=gene-C9F07_23715;Name=C9F07_23715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23715 PYKI01002405.1 Protein Homology CDS 937 1263 . + 0 ID=cds-TGD51849.1;Parent=gene-C9F07_23715;Dbxref=NCBI_GP:TGD51849.1;Name=TGD51849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=C9F07_23715;product=trp operon repressor;protein_id=TGD51849.1;transl_table=11 PYKI01002405.1 Genbank gene 1181 1360 . - . ID=gene-C9F07_23720;Name=C9F07_23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23720 PYKI01002405.1 Protein Homology CDS 1181 1360 . - 0 ID=cds-TGD51850.1;Parent=gene-C9F07_23720;Dbxref=NCBI_GP:TGD51850.1;Name=TGD51850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341252.1;locus_tag=C9F07_23720;product=hypothetical protein;protein_id=TGD51850.1;transl_table=11 PYKI01002405.1 Genbank gene 1365 1880 . - . ID=gene-C9F07_23725;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=C9F07_23725 PYKI01002405.1 Protein Homology CDS 1365 1880 . - 0 ID=cds-TGD51851.1;Parent=gene-C9F07_23725;Dbxref=NCBI_GP:TGD51851.1;Name=TGD51851.1;Note=pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=C9F07_23725;product=non-canonical purine NTP phosphatase;protein_id=TGD51851.1;transl_table=11 PYKI01002405.1 Genbank gene 1929 2576 . + . ID=gene-C9F07_23730;Name=C9F07_23730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23730 PYKI01002405.1 Protein Homology CDS 1929 2576 . + 0 ID=cds-TGD51852.1;Parent=gene-C9F07_23730;Dbxref=NCBI_GP:TGD51852.1;Name=TGD51852.1;Note=catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=C9F07_23730;product=phosphoglycerate mutase GpmB;protein_id=TGD51852.1;transl_table=11 PYKI01002405.1 Genbank gene 2573 3442 . - . ID=gene-C9F07_23735;Name=C9F07_23735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23735 PYKI01002405.1 Protein Homology CDS 2573 3442 . - 0 ID=cds-TGD51853.1;Parent=gene-C9F07_23735;Dbxref=NCBI_GP:TGD51853.1;Name=TGD51853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=C9F07_23735;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=TGD51853.1;transl_table=11 PYKI01002405.1 Genbank gene 3654 4127 . + . ID=gene-C9F07_23740;Name=C9F07_23740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23740 PYKI01002405.1 Protein Homology CDS 3654 4127 . + 0 ID=cds-TGD51854.1;Parent=gene-C9F07_23740;Dbxref=NCBI_GP:TGD51854.1;Name=TGD51854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458994.1;locus_tag=C9F07_23740;product=hypothetical protein;protein_id=TGD51854.1;transl_table=11 PYKI01002405.1 Genbank gene 4140 4829 . + . ID=gene-C9F07_23745;Name=C9F07_23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23745 PYKI01002405.1 Protein Homology CDS 4140 4829 . + 0 ID=cds-TGD51855.1;Parent=gene-C9F07_23745;Dbxref=NCBI_GP:TGD51855.1;Name=TGD51855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=C9F07_23745;product=two-component system response regulator CreB;protein_id=TGD51855.1;transl_table=11 PYKI01002405.1 Genbank gene 4829 6253 . + . ID=gene-C9F07_23750;Name=C9F07_23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23750 PYKI01002405.1 Protein Homology CDS 4829 6253 . + 0 ID=cds-TGD51856.1;Parent=gene-C9F07_23750;Dbxref=NCBI_GP:TGD51856.1;Name=TGD51856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458996.1;locus_tag=C9F07_23750;product=two-component system sensor histidine kinase CreC;protein_id=TGD51856.1;transl_table=11 PYKI01002405.1 Genbank gene 6311 7660 . + . ID=gene-C9F07_23755;Name=C9F07_23755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23755 PYKI01002405.1 Protein Homology CDS 6311 7660 . + 0 ID=cds-TGD51857.1;Parent=gene-C9F07_23755;Dbxref=NCBI_GP:TGD51857.1;Name=TGD51857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458997.1;locus_tag=C9F07_23755;product=cell envelope integrity protein CreD;protein_id=TGD51857.1;transl_table=11 PYKI01002405.1 Genbank gene 7718 8803 . - . ID=gene-C9F07_23760;Name=C9F07_23760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23760 PYKI01002405.1 Protein Homology CDS 7718 8803 . - 0 ID=cds-TGD51858.1;Parent=gene-C9F07_23760;Dbxref=NCBI_GP:TGD51858.1;Name=TGD51858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=C9F07_23760;product=type 1 fimbrial protein;protein_id=TGD51858.1;transl_table=11 PYKI01002405.1 Genbank gene 8844 9401 . - . ID=gene-C9F07_23765;Name=C9F07_23765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23765 PYKI01002405.1 Protein Homology CDS 8844 9401 . - 0 ID=cds-TGD51859.1;Parent=gene-C9F07_23765;Dbxref=NCBI_GP:TGD51859.1;Name=TGD51859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=C9F07_23765;product=fimbrial protein SthD;protein_id=TGD51859.1;transl_table=11 PYKI01002405.1 Genbank gene 9419 10694 . - . ID=gene-C9F07_23770;Name=C9F07_23770;end_range=10694,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23770;partial=true PYKI01002405.1 Protein Homology CDS 9419 10694 . - 1 ID=cds-TGD51860.1;Parent=gene-C9F07_23770;Dbxref=NCBI_GP:TGD51860.1;Name=TGD51860.1;end_range=10694,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=C9F07_23770;partial=true;product=fimbrial assembly protein;protein_id=TGD51860.1;transl_table=11 ##sequence-region PYKI01002971.1 1 2696 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002971.1 Genbank region 1 2696 . + . ID=PYKI01002971.1:1..2696;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002971.1 Genbank gene 1 966 . + . ID=gene-C9F07_29775;Name=C9F07_29775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29775;partial=true;start_range=.,1 PYKI01002971.1 Protein Homology CDS 1 966 . + 0 ID=cds-TGD41634.1;Parent=gene-C9F07_29775;Dbxref=NCBI_GP:TGD41634.1;Name=TGD41634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461478.1;locus_tag=C9F07_29775;partial=true;product=IscS subfamily cysteine desulfurase;protein_id=TGD41634.1;start_range=.,1;transl_table=11 PYKI01002971.1 Genbank gene 994 1380 . + . ID=gene-C9F07_29780;Name=C9F07_29780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29780 PYKI01002971.1 Protein Homology CDS 994 1380 . + 0 ID=cds-TGD41630.1;Parent=gene-C9F07_29780;Dbxref=NCBI_GP:TGD41630.1;Name=TGD41630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=C9F07_29780;product=iron-sulfur cluster scaffold-like protein;protein_id=TGD41630.1;transl_table=11 PYKI01002971.1 Genbank gene 1409 1732 . + . ID=gene-C9F07_29785;Name=C9F07_29785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29785 PYKI01002971.1 Protein Homology CDS 1409 1732 . + 0 ID=cds-TGD41631.1;Parent=gene-C9F07_29785;Dbxref=NCBI_GP:TGD41631.1;Name=TGD41631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457072.1;locus_tag=C9F07_29785;product=iron-sulfur cluster assembly accessory protein;protein_id=TGD41631.1;transl_table=11 PYKI01002971.1 Genbank gene 1928 2443 . + . ID=gene-C9F07_29790;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=C9F07_29790 PYKI01002971.1 Protein Homology CDS 1928 2443 . + 0 ID=cds-TGD41632.1;Parent=gene-C9F07_29790;Dbxref=NCBI_GP:TGD41632.1;Name=TGD41632.1;Note=J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins;gbkey=CDS;gene=hscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=C9F07_29790;product=co-chaperone protein HscB;protein_id=TGD41632.1;transl_table=11 PYKI01002971.1 Genbank gene 2456 2696 . + . ID=gene-C9F07_29795;Name=hscA;end_range=2696,.;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=C9F07_29795;partial=true PYKI01002971.1 Protein Homology CDS 2456 2696 . + 0 ID=cds-TGD41633.1;Parent=gene-C9F07_29795;Dbxref=NCBI_GP:TGD41633.1;Name=TGD41633.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;end_range=2696,.;gbkey=CDS;gene=hscA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=C9F07_29795;partial=true;product=Fe-S protein assembly chaperone HscA;protein_id=TGD41633.1;transl_table=11 ##sequence-region PYKI01002742.1 1 2696 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002742.1 Genbank region 1 2696 . + . ID=PYKI01002742.1:1..2696;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002742.1 Genbank gene 1 224 . - . ID=gene-C9F07_27370;Name=C9F07_27370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27370;partial=true;start_range=.,1 PYKI01002742.1 Protein Homology CDS 1 224 . - 0 ID=cds-TGD47125.1;Parent=gene-C9F07_27370;Dbxref=NCBI_GP:TGD47125.1;Name=TGD47125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458837.1;locus_tag=C9F07_27370;partial=true;product=NAD(P)-dependent oxidoreductase;protein_id=TGD47125.1;start_range=.,1;transl_table=11 PYKI01002742.1 Genbank gene 312 698 . + . ID=gene-C9F07_27375;Name=C9F07_27375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27375 PYKI01002742.1 Protein Homology CDS 312 698 . + 0 ID=cds-TGD47126.1;Parent=gene-C9F07_27375;Dbxref=NCBI_GP:TGD47126.1;Name=TGD47126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458838.1;locus_tag=C9F07_27375;product=transcriptional regulator;protein_id=TGD47126.1;transl_table=11 PYKI01002742.1 Genbank gene 756 2696 . - . ID=gene-C9F07_27380;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=C9F07_27380 PYKI01002742.1 Protein Homology CDS 756 2696 . - 0 ID=cds-TGD47127.1;Parent=gene-C9F07_27380;Dbxref=NCBI_GP:TGD47127.1;Name=TGD47127.1;Note=periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;gbkey=CDS;gene=cpdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=C9F07_27380;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=TGD47127.1;transl_table=11 ##sequence-region PYKI01002738.1 1 2667 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002738.1 Genbank region 1 2667 . + . ID=PYKI01002738.1:1..2667;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002738.1 Genbank gene 99 449 . - . ID=gene-C9F07_27325;Name=C9F07_27325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27325 PYKI01002738.1 Protein Homology CDS 99 449 . - 0 ID=cds-TGD47187.1;Parent=gene-C9F07_27325;Dbxref=NCBI_GP:TGD47187.1;Name=TGD47187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=C9F07_27325;product=succinate dehydrogenase membrane anchor subunit;protein_id=TGD47187.1;transl_table=11 PYKI01002738.1 Genbank gene 443 832 . - . ID=gene-C9F07_27330;Name=C9F07_27330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27330 PYKI01002738.1 Protein Homology CDS 443 832 . - 0 ID=cds-TGD47189.1;Parent=gene-C9F07_27330;Dbxref=NCBI_GP:TGD47189.1;Name=TGD47189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455288.1;locus_tag=C9F07_27330;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=TGD47189.1;transl_table=11 PYKI01002738.1 Genbank pseudogene 918 1106 . + . ID=gene-C9F07_27335;Name=C9F07_27335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27335;pseudo=true PYKI01002738.1 Protein Homology CDS 918 1106 . + 0 ID=cds-C9F07_27335;Parent=gene-C9F07_27335;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308495.1;locus_tag=C9F07_27335;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002738.1 Genbank gene 1241 1627 . - . ID=gene-C9F07_27340;Name=C9F07_27340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27340 PYKI01002738.1 Protein Homology CDS 1241 1627 . - 0 ID=cds-TGD47188.1;Parent=gene-C9F07_27340;Dbxref=NCBI_GP:TGD47188.1;Name=TGD47188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459716.1;locus_tag=C9F07_27340;product=hypothetical protein;protein_id=TGD47188.1;transl_table=11 PYKI01002738.1 Genbank gene 1587 2667 . + . ID=gene-C9F07_27345;Name=gltA;end_range=2667,.;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=C9F07_27345;partial=true PYKI01002738.1 Protein Homology CDS 1587 2667 . + 0 ID=cds-TGD47190.1;Parent=gene-C9F07_27345;Dbxref=NCBI_GP:TGD47190.1;Name=TGD47190.1;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;end_range=2667,.;gbkey=CDS;gene=gltA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455286.1;locus_tag=C9F07_27345;partial=true;product=citrate (Si)-synthase;protein_id=TGD47190.1;transl_table=11 ##sequence-region PYKI01001109.1 1 2694 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001109.1 Genbank region 1 2694 . + . ID=PYKI01001109.1:1..2694;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001109.1 Genbank gene 1 926 . - . ID=gene-C9F07_10340;Name=C9F07_10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10340;partial=true;start_range=.,1 PYKI01001109.1 Protein Homology CDS 1 926 . - 0 ID=cds-TGD95090.1;Parent=gene-C9F07_10340;Dbxref=NCBI_GP:TGD95090.1;Name=TGD95090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=C9F07_10340;partial=true;product=two-component system sensor histidine kinase RstB;protein_id=TGD95090.1;start_range=.,1;transl_table=11 PYKI01001109.1 Genbank gene 1037 2694 . - . ID=gene-C9F07_10345;Name=C9F07_10345;end_range=2694,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10345;partial=true PYKI01001109.1 Protein Homology CDS 1037 2694 . - 2 ID=cds-TGD95091.1;Parent=gene-C9F07_10345;Dbxref=NCBI_GP:TGD95091.1;Name=TGD95091.1;end_range=2694,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456060.1;locus_tag=C9F07_10345;partial=true;product=amidohydrolase;protein_id=TGD95091.1;transl_table=11 ##sequence-region PYKI01001877.1 1 2691 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001877.1 Genbank region 1 2691 . + . ID=PYKI01001877.1:1..2691;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001877.1 Genbank gene 1 1248 . - . ID=gene-C9F07_18085;Name=C9F07_18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18085;partial=true;start_range=.,1 PYKI01001877.1 Protein Homology CDS 1 1248 . - 0 ID=cds-TGD62367.1;Parent=gene-C9F07_18085;Dbxref=NCBI_GP:TGD62367.1;Name=TGD62367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455480.1;locus_tag=C9F07_18085;partial=true;product=chromosome partition protein MukB;protein_id=TGD62367.1;start_range=.,1;transl_table=11 PYKI01001877.1 Genbank gene 1248 1952 . - . ID=gene-C9F07_18090;Name=C9F07_18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18090 PYKI01001877.1 Protein Homology CDS 1248 1952 . - 0 ID=cds-TGD62368.1;Parent=gene-C9F07_18090;Dbxref=NCBI_GP:TGD62368.1;Name=TGD62368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=C9F07_18090;product=chromosome partition protein MukE;protein_id=TGD62368.1;transl_table=11 PYKI01001877.1 Genbank gene 1933 2691 . - . ID=gene-C9F07_18095;Name=C9F07_18095;end_range=2691,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18095;partial=true PYKI01001877.1 Protein Homology CDS 1933 2691 . - 0 ID=cds-TGD62369.1;Parent=gene-C9F07_18095;Dbxref=NCBI_GP:TGD62369.1;Name=TGD62369.1;end_range=2691,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=C9F07_18095;partial=true;product=chromosome partition protein MukF;protein_id=TGD62369.1;transl_table=11 ##sequence-region PYKI01003434.1 1 2688 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003434.1 Genbank region 1 2688 . + . ID=PYKI01003434.1:1..2688;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003434.1 Genbank pseudogene 53 931 . + . ID=gene-C9F07_34525;Name=C9F07_34525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34525;pseudo=true PYKI01003434.1 Protein Homology CDS 53 931 . + 0 ID=cds-C9F07_34525;Parent=gene-C9F07_34525;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=C9F07_34525;product=anthranilate synthase component I;pseudo=true;transl_table=11 PYKI01003434.1 Genbank gene 931 2526 . + . ID=gene-C9F07_34530;Name=C9F07_34530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34530 PYKI01003434.1 Protein Homology CDS 931 2526 . + 0 ID=cds-TGD33499.1;Parent=gene-C9F07_34530;Dbxref=NCBI_GP:TGD33499.1;Name=TGD33499.1;Note=bifunctional anthranilate synthase II/anthranilate phosphoribosyltransferase%3B TrpD%3B forms a heterotetramer with Trp E and the complex catalyzes the formation of anthranilate from chorismate and glutamine%3B also catalyzes the formation of N-(5-phospho-D-ribosyl)-anthranilate from athranilate and 5-phospho-alpha-D-ribose 1-diphosphate%3B functions in tryptophan biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=C9F07_34530;product=bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase;protein_id=TGD33499.1;transl_table=11 PYKI01003434.1 Genbank gene 2530 2688 . + . ID=gene-C9F07_34535;Name=C9F07_34535;end_range=2688,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34535;partial=true PYKI01003434.1 Protein Homology CDS 2530 2688 . + 0 ID=cds-TGD33500.1;Parent=gene-C9F07_34535;Dbxref=NCBI_GP:TGD33500.1;Name=TGD33500.1;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;end_range=2688,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455773.1;locus_tag=C9F07_34535;partial=true;product=bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase;protein_id=TGD33500.1;transl_table=11 ##sequence-region PYKI01000385.1 1 2684 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000385.1 Genbank region 1 2684 . + . ID=PYKI01000385.1:1..2684;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000385.1 Genbank gene 482 1327 . + . ID=gene-C9F07_02905;Name=C9F07_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02905 PYKI01000385.1 Protein Homology CDS 482 1327 . + 0 ID=cds-TGE22786.1;Parent=gene-C9F07_02905;Dbxref=NCBI_GP:TGE22786.1;Name=TGE22786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=C9F07_02905;product=arabinose operon regulatory protein;protein_id=TGE22786.1;transl_table=11 PYKI01000385.1 Genbank gene 1446 2213 . + . ID=gene-C9F07_02910;Name=C9F07_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02910 PYKI01000385.1 Protein Homology CDS 1446 2213 . + 0 ID=cds-TGE22787.1;Parent=gene-C9F07_02910;Dbxref=NCBI_GP:TGE22787.1;Name=TGE22787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454717.1;locus_tag=C9F07_02910;product=hypothetical protein;protein_id=TGE22787.1;transl_table=11 PYKI01000385.1 Genbank gene 2252 2684 . - . ID=gene-C9F07_02915;Name=thiQ;end_range=2684,.;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=C9F07_02915;partial=true PYKI01000385.1 Protein Homology CDS 2252 2684 . - 1 ID=cds-TGE22788.1;Parent=gene-C9F07_02915;Dbxref=NCBI_GP:TGE22788.1;Name=TGE22788.1;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;end_range=2684,.;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=C9F07_02915;partial=true;product=thiamine ABC transporter ATP-binding protein;protein_id=TGE22788.1;transl_table=11 ##sequence-region PYKI01003022.1 1 2683 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003022.1 Genbank region 1 2683 . + . ID=PYKI01003022.1:1..2683;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003022.1 Genbank gene 1 701 . - . ID=gene-C9F07_30320;Name=C9F07_30320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30320;partial=true;start_range=.,1 PYKI01003022.1 Protein Homology CDS 1 701 . - 0 ID=cds-TGD41123.1;Parent=gene-C9F07_30320;Dbxref=NCBI_GP:TGD41123.1;Name=TGD41123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457208.1;locus_tag=C9F07_30320;partial=true;product=proline/glycine betaine ABC transporter permease ProW;protein_id=TGD41123.1;start_range=.,1;transl_table=11 PYKI01003022.1 Genbank gene 694 1896 . - . ID=gene-C9F07_30325;Name=C9F07_30325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30325 PYKI01003022.1 Protein Homology CDS 694 1896 . - 0 ID=cds-TGD41124.1;Parent=gene-C9F07_30325;Dbxref=NCBI_GP:TGD41124.1;Name=TGD41124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=C9F07_30325;product=proline/glycine betaine ABC transporter ATP-binding protein ProV;protein_id=TGD41124.1;transl_table=11 PYKI01003022.1 Genbank pseudogene 2251 2683 . - . ID=gene-C9F07_30330;Name=C9F07_30330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30330;pseudo=true PYKI01003022.1 Protein Homology CDS 2251 2683 . - 1 ID=cds-C9F07_30330;Parent=gene-C9F07_30330;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457207.1;locus_tag=C9F07_30330;product=ribonucleotide-diphosphate reductase subunit beta;pseudo=true;transl_table=11 ##sequence-region PYKI01001326.1 1 2682 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001326.1 Genbank region 1 2682 . + . ID=PYKI01001326.1:1..2682;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001326.1 Genbank gene 1 304 . - . ID=gene-C9F07_12400;Name=C9F07_12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12400;partial=true;start_range=.,1 PYKI01001326.1 Protein Homology CDS 1 304 . - 0 ID=cds-TGD86019.1;Parent=gene-C9F07_12400;Dbxref=NCBI_GP:TGD86019.1;Name=TGD86019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458342.1;locus_tag=C9F07_12400;partial=true;product=hypothetical protein;protein_id=TGD86019.1;start_range=.,1;transl_table=11 PYKI01001326.1 Genbank gene 474 719 . + . ID=gene-C9F07_12405;Name=C9F07_12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12405 PYKI01001326.1 Protein Homology CDS 474 719 . + 0 ID=cds-TGD86020.1;Parent=gene-C9F07_12405;Dbxref=NCBI_GP:TGD86020.1;Name=TGD86020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458343.1;locus_tag=C9F07_12405;product=sulfurtransferase TusA;protein_id=TGD86020.1;transl_table=11 PYKI01001326.1 Genbank gene 743 2386 . - . ID=gene-C9F07_12410;Name=C9F07_12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12410 PYKI01001326.1 Protein Homology CDS 743 2386 . - 0 ID=cds-TGD86018.1;Parent=gene-C9F07_12410;Dbxref=NCBI_GP:TGD86018.1;Name=TGD86018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458344.1;locus_tag=C9F07_12410;product=methyl-accepting chemotaxis citrate transducer;protein_id=TGD86018.1;transl_table=11 ##sequence-region PYKI01002089.1 1 2681 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002089.1 Genbank region 1 2681 . + . ID=PYKI01002089.1:1..2681;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002089.1 Genbank gene 1 909 . - . ID=gene-C9F07_20275;Name=C9F07_20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20275;partial=true;start_range=.,1 PYKI01002089.1 Protein Homology CDS 1 909 . - 0 ID=cds-TGD58817.1;Parent=gene-C9F07_20275;Dbxref=NCBI_GP:TGD58817.1;Name=TGD58817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459345.3;locus_tag=C9F07_20275;partial=true;product=multidrug transporter;protein_id=TGD58817.1;start_range=.,1;transl_table=11 PYKI01002089.1 Genbank gene 872 2681 . - . ID=gene-C9F07_20280;Name=C9F07_20280;end_range=2681,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20280;partial=true PYKI01002089.1 Protein Homology CDS 872 2681 . - 1 ID=cds-TGD58816.1;Parent=gene-C9F07_20280;Dbxref=NCBI_GP:TGD58816.1;Name=TGD58816.1;end_range=2681,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=C9F07_20280;partial=true;product=multidrug efflux RND transporter permease subunit;protein_id=TGD58816.1;transl_table=11 ##sequence-region PYKI01000293.1 1 5718 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000293.1 Genbank region 1 5718 . + . ID=PYKI01000293.1:1..5718;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000293.1 Genbank gene 1 1773 . - . ID=gene-C9F07_01910;Name=C9F07_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01910;partial=true;start_range=.,1 PYKI01000293.1 Protein Homology CDS 1 1773 . - 0 ID=cds-TGE27811.1;Parent=gene-C9F07_01910;Dbxref=NCBI_GP:TGE27811.1;Name=TGE27811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458400.1;locus_tag=C9F07_01910;partial=true;product=RNA-binding transcriptional accessory protein;protein_id=TGE27811.1;start_range=.,1;transl_table=11 PYKI01000293.1 Genbank gene 1872 2345 . - . ID=gene-C9F07_01915;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=C9F07_01915 PYKI01000293.1 Protein Homology CDS 1872 2345 . - 0 ID=cds-TGE27812.1;Parent=gene-C9F07_01915;Dbxref=NCBI_GP:TGE27812.1;Name=TGE27812.1;gbkey=CDS;gene=greB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458401.1;locus_tag=C9F07_01915;product=transcription elongation factor GreB;protein_id=TGE27812.1;transl_table=11 PYKI01000293.1 Genbank gene 2571 3290 . + . ID=gene-C9F07_01920;Name=C9F07_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01920 PYKI01000293.1 Protein Homology CDS 2571 3290 . + 0 ID=cds-TGE27813.1;Parent=gene-C9F07_01920;Dbxref=NCBI_GP:TGE27813.1;Name=TGE27813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312274.1;locus_tag=C9F07_01920;product=DNA-binding response regulator;protein_id=TGE27813.1;transl_table=11 PYKI01000293.1 Genbank gene 3287 4639 . + . ID=gene-C9F07_01925;Name=C9F07_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01925 PYKI01000293.1 Protein Homology CDS 3287 4639 . + 0 ID=cds-TGE27814.1;Parent=gene-C9F07_01925;Dbxref=NCBI_GP:TGE27814.1;Name=TGE27814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=C9F07_01925;product=two-component system sensor histidine kinase EnvZ;protein_id=TGE27814.1;transl_table=11 PYKI01000293.1 Genbank pseudogene 4714 5718 . - . ID=gene-C9F07_01930;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=pseudogene;locus_tag=C9F07_01930;pseudo=true PYKI01000293.1 Protein Homology CDS 4714 5718 . - 0 ID=cds-C9F07_01930;Parent=gene-C9F07_01930;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=pckA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458404.1;locus_tag=C9F07_01930;product=phosphoenolpyruvate carboxykinase (ATP);pseudo=true;transl_table=11 ##sequence-region PYKI01002360.1 1 2679 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002360.1 Genbank region 1 2679 . + . ID=PYKI01002360.1:1..2679;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002360.1 Genbank gene 1 2679 . + . ID=gene-C9F07_23205;Name=C9F07_23205;end_range=2679,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23205;partial=true;start_range=.,1 PYKI01002360.1 Protein Homology CDS 1 2679 . + 2 ID=cds-TGD53045.1;Parent=gene-C9F07_23205;Dbxref=NCBI_GP:TGD53045.1;Name=TGD53045.1;end_range=2679,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549708.1;locus_tag=C9F07_23205;partial=true;product=autotransporter adhesin BigA;protein_id=TGD53045.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002028.1 1 2678 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002028.1 Genbank region 1 2678 . + . ID=PYKI01002028.1:1..2678;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002028.1 Genbank gene 1 999 . - . ID=gene-C9F07_19575;Name=C9F07_19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19575 PYKI01002028.1 Protein Homology CDS 1 999 . - 0 ID=cds-TGD60041.1;Parent=gene-C9F07_19575;Dbxref=NCBI_GP:TGD60041.1;Name=TGD60041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457787.1;locus_tag=C9F07_19575;product=HTH-type transcriptional regulator MetR;protein_id=TGD60041.1;transl_table=11 PYKI01002028.1 Genbank gene 1248 2678 . + . ID=gene-C9F07_19580;Name=C9F07_19580;end_range=2678,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19580;partial=true PYKI01002028.1 Protein Homology CDS 1248 2678 . + 0 ID=cds-TGD60042.1;Parent=gene-C9F07_19580;Dbxref=NCBI_GP:TGD60042.1;Name=TGD60042.1;end_range=2678,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=C9F07_19580;partial=true;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=TGD60042.1;transl_table=11 ##sequence-region PYKI01000051.1 1 2677 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000051.1 Genbank region 1 2677 . + . ID=PYKI01000051.1:1..2677;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000051.1 Genbank gene 19 210 . + . ID=gene-C9F07_00280;Name=C9F07_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00280 PYKI01000051.1 Protein Homology CDS 19 210 . + 0 ID=cds-TGE30184.1;Parent=gene-C9F07_00280;Dbxref=NCBI_GP:TGE30184.1;Name=TGE30184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=C9F07_00280;product=50S ribosomal protein L29;protein_id=TGE30184.1;transl_table=11 PYKI01000051.1 Genbank gene 210 464 . + . ID=gene-C9F07_00285;Name=C9F07_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00285 PYKI01000051.1 Protein Homology CDS 210 464 . + 0 ID=cds-TGE30185.1;Parent=gene-C9F07_00285;Dbxref=NCBI_GP:TGE30185.1;Name=TGE30185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=C9F07_00285;product=30S ribosomal protein S17;protein_id=TGE30185.1;transl_table=11 PYKI01000051.1 Genbank gene 628 999 . + . ID=gene-C9F07_00290;Name=C9F07_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00290 PYKI01000051.1 Protein Homology CDS 628 999 . + 0 ID=cds-TGE30186.1;Parent=gene-C9F07_00290;Dbxref=NCBI_GP:TGE30186.1;Name=TGE30186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458470.1;locus_tag=C9F07_00290;product=50S ribosomal protein L14;protein_id=TGE30186.1;transl_table=11 PYKI01000051.1 Genbank gene 1010 1324 . + . ID=gene-C9F07_00295;Name=C9F07_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00295 PYKI01000051.1 Protein Homology CDS 1010 1324 . + 0 ID=cds-TGE30187.1;Parent=gene-C9F07_00295;Dbxref=NCBI_GP:TGE30187.1;Name=TGE30187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=C9F07_00295;product=50S ribosomal protein L24;protein_id=TGE30187.1;transl_table=11 PYKI01000051.1 Genbank gene 1339 1878 . + . ID=gene-C9F07_00300;Name=C9F07_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00300 PYKI01000051.1 Protein Homology CDS 1339 1878 . + 0 ID=cds-TGE30188.1;Parent=gene-C9F07_00300;Dbxref=NCBI_GP:TGE30188.1;Name=TGE30188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=C9F07_00300;product=50S ribosomal protein L5;protein_id=TGE30188.1;transl_table=11 PYKI01000051.1 Genbank gene 1893 2198 . + . ID=gene-C9F07_00305;Name=C9F07_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00305 PYKI01000051.1 Protein Homology CDS 1893 2198 . + 0 ID=cds-TGE30189.1;Parent=gene-C9F07_00305;Dbxref=NCBI_GP:TGE30189.1;Name=TGE30189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438702.1;locus_tag=C9F07_00305;product=30S ribosomal protein S14;protein_id=TGE30189.1;transl_table=11 PYKI01000051.1 Genbank gene 2232 2677 . + . ID=gene-C9F07_00310;Name=C9F07_00310;end_range=2677,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00310;partial=true PYKI01000051.1 Protein Homology CDS 2232 2677 . + 0 ID=cds-TGE30190.1;Parent=gene-C9F07_00310;Dbxref=NCBI_GP:TGE30190.1;Name=TGE30190.1;end_range=2677,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=C9F07_00310;partial=true;product=30S ribosomal protein S8;protein_id=TGE30190.1;transl_table=11 ##sequence-region PYKI01002313.1 1 2671 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002313.1 Genbank region 1 2671 . + . ID=PYKI01002313.1:1..2671;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002313.1 Genbank gene 1 235 . - . ID=gene-C9F07_22670;Name=C9F07_22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22670;partial=true;start_range=.,1 PYKI01002313.1 Protein Homology CDS 1 235 . - 0 ID=cds-TGD54243.1;Parent=gene-C9F07_22670;Dbxref=NCBI_GP:TGD54243.1;Name=TGD54243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=C9F07_22670;partial=true;product=acetolactate synthase 2 small subunit;protein_id=TGD54243.1;start_range=.,1;transl_table=11 PYKI01002313.1 Genbank gene 232 1878 . - . ID=gene-C9F07_22675;Name=C9F07_22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22675 PYKI01002313.1 Protein Homology CDS 232 1878 . - 0 ID=cds-TGD54244.1;Parent=gene-C9F07_22675;Dbxref=NCBI_GP:TGD54244.1;Name=TGD54244.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=C9F07_22675;product=acetolactate synthase 2 catalytic subunit;protein_id=TGD54244.1;transl_table=11 PYKI01002313.1 Genbank gene 2018 2116 . - . ID=gene-C9F07_22680;Name=C9F07_22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22680 PYKI01002313.1 Protein Homology CDS 2018 2116 . - 0 ID=cds-TGD54245.1;Parent=gene-C9F07_22680;Dbxref=NCBI_GP:TGD54245.1;Name=TGD54245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=C9F07_22680;product=IlvGMEDA operon leader peptide;protein_id=TGD54245.1;transl_table=11 PYKI01002313.1 Genbank gene 2467 2671 . + . ID=gene-C9F07_22685;Name=C9F07_22685;end_range=2671,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22685;partial=true PYKI01002313.1 Protein Homology CDS 2467 2671 . + 0 ID=cds-TGD54246.1;Parent=gene-C9F07_22685;Dbxref=NCBI_GP:TGD54246.1;Name=TGD54246.1;end_range=2671,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=C9F07_22685;partial=true;product=hypothetical protein;protein_id=TGD54246.1;transl_table=11 ##sequence-region PYKI01002048.1 1 2670 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002048.1 Genbank region 1 2670 . + . ID=PYKI01002048.1:1..2670;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002048.1 Genbank gene 141 335 . - . ID=gene-C9F07_19805;Name=C9F07_19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19805 PYKI01002048.1 Protein Homology CDS 141 335 . - 0 ID=cds-TGD59967.1;Parent=gene-C9F07_19805;Dbxref=NCBI_GP:TGD59967.1;Name=TGD59967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446547.1;locus_tag=C9F07_19805;product=hypothetical protein;protein_id=TGD59967.1;transl_table=11 PYKI01002048.1 Genbank gene 545 835 . + . ID=gene-C9F07_19810;Name=C9F07_19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19810 PYKI01002048.1 Protein Homology CDS 545 835 . + 0 ID=cds-TGD59968.1;Parent=gene-C9F07_19810;Dbxref=NCBI_GP:TGD59968.1;Name=TGD59968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454692.1;locus_tag=C9F07_19810;product=DUF1471 domain-containing protein;protein_id=TGD59968.1;transl_table=11 PYKI01002048.1 Genbank gene 1059 1481 . - . ID=gene-C9F07_19815;Name=C9F07_19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19815 PYKI01002048.1 Protein Homology CDS 1059 1481 . - 0 ID=cds-TGD59969.1;Parent=gene-C9F07_19815;Dbxref=NCBI_GP:TGD59969.1;Name=TGD59969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454691.1;locus_tag=C9F07_19815;product=hypothetical protein;protein_id=TGD59969.1;transl_table=11 PYKI01002048.1 Genbank pseudogene 1775 2005 . - . ID=gene-C9F07_19820;Name=C9F07_19820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19820;pseudo=true PYKI01002048.1 Protein Homology CDS 1775 2005 . - 0 ID=cds-C9F07_19820;Parent=gene-C9F07_19820;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454690.1;locus_tag=C9F07_19820;product=YgdI/YgdR family lipoprotein;pseudo=true;transl_table=11 PYKI01002048.1 Genbank gene 2109 2670 . - . ID=gene-C9F07_19825;Name=C9F07_19825;end_range=2670,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19825;partial=true PYKI01002048.1 Protein Homology CDS 2109 2670 . - 1 ID=cds-TGD59970.1;Parent=gene-C9F07_19825;Dbxref=NCBI_GP:TGD59970.1;Name=TGD59970.1;end_range=2670,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=C9F07_19825;partial=true;product=MFS transporter;protein_id=TGD59970.1;transl_table=11 ##sequence-region PYKI01003016.1 1 2669 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003016.1 Genbank region 1 2669 . + . ID=PYKI01003016.1:1..2669;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003016.1 Genbank gene 1 770 . + . ID=gene-C9F07_30240;Name=C9F07_30240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30240;partial=true;start_range=.,1 PYKI01003016.1 Protein Homology CDS 1 770 . + 2 ID=cds-TGD41158.1;Parent=gene-C9F07_30240;Dbxref=NCBI_GP:TGD41158.1;Name=TGD41158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457525.1;locus_tag=C9F07_30240;partial=true;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=TGD41158.1;start_range=.,1;transl_table=11 PYKI01003016.1 Genbank gene 905 1285 . - . ID=gene-C9F07_30245;Name=C9F07_30245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30245 PYKI01003016.1 Protein Homology CDS 905 1285 . - 0 ID=cds-TGD41161.1;Parent=gene-C9F07_30245;Dbxref=NCBI_GP:TGD41161.1;Name=TGD41161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=C9F07_30245;product=anti-adapter protein IraD;protein_id=TGD41161.1;transl_table=11 PYKI01003016.1 Genbank gene 1285 1770 . - . ID=gene-C9F07_30250;Name=C9F07_30250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30250 PYKI01003016.1 Protein Homology CDS 1285 1770 . - 0 ID=cds-TGD41159.1;Parent=gene-C9F07_30250;Dbxref=NCBI_GP:TGD41159.1;Name=TGD41159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457526.1;locus_tag=C9F07_30250;product=type VI secretion system tube protein Hcp;protein_id=TGD41159.1;transl_table=11 PYKI01003016.1 Genbank gene 2496 2669 . - . ID=gene-C9F07_30255;Name=C9F07_30255;end_range=2669,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30255;partial=true PYKI01003016.1 Protein Homology CDS 2496 2669 . - 0 ID=cds-TGD41160.1;Parent=gene-C9F07_30255;Dbxref=NCBI_GP:TGD41160.1;Name=TGD41160.1;end_range=2669,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457527.1;locus_tag=C9F07_30255;partial=true;product=xylanase deacetylase;protein_id=TGD41160.1;transl_table=11 ##sequence-region PYKI01003057.1 1 2668 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003057.1 Genbank region 1 2668 . + . ID=PYKI01003057.1:1..2668;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003057.1 Genbank gene 1 289 . - . ID=gene-C9F07_30660;Name=C9F07_30660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30660;partial=true;start_range=.,1 PYKI01003057.1 Protein Homology CDS 1 289 . - 0 ID=cds-TGD40977.1;Parent=gene-C9F07_30660;Dbxref=NCBI_GP:TGD40977.1;Name=TGD40977.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B transduces proton motive force of the cytoplasmic membrane to outer membrane transporters%3B involved in the transport of ron-siderophore complexes%2C vitamin B12 and colicins;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=C9F07_30660;partial=true;product=TonB system transport protein TonB;protein_id=TGD40977.1;start_range=.,1;transl_table=11 PYKI01003057.1 Genbank gene 512 808 . + . ID=gene-C9F07_30665;Name=C9F07_30665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30665 PYKI01003057.1 Protein Homology CDS 512 808 . + 0 ID=cds-TGD40975.1;Parent=gene-C9F07_30665;Dbxref=NCBI_GP:TGD40975.1;Name=TGD40975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455760.1;locus_tag=C9F07_30665;product=hypothetical protein;protein_id=TGD40975.1;transl_table=11 PYKI01003057.1 Genbank gene 1168 2628 . + . ID=gene-C9F07_30670;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=C9F07_30670 PYKI01003057.1 Protein Homology CDS 1168 2628 . + 0 ID=cds-TGD40976.1;Parent=gene-C9F07_30670;Dbxref=NCBI_GP:TGD40976.1;Name=TGD40976.1;gbkey=CDS;gene=cls;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=C9F07_30670;product=cardiolipin synthase A;protein_id=TGD40976.1;transl_table=11 ##sequence-region PYKI01000450.1 1 2667 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000450.1 Genbank region 1 2667 . + . ID=PYKI01000450.1:1..2667;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000450.1 Genbank gene 1 203 . + . ID=gene-C9F07_03475;Name=C9F07_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03475;partial=true;start_range=.,1 PYKI01000450.1 Protein Homology CDS 1 203 . + 2 ID=cds-TGE19978.1;Parent=gene-C9F07_03475;Dbxref=NCBI_GP:TGE19978.1;Name=TGE19978.1;Note=catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1%2C6-bisphosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=C9F07_03475;partial=true;product=fructose-bisphosphate aldolase;protein_id=TGE19978.1;start_range=.,1;transl_table=11 PYKI01000450.1 Genbank gene 256 1155 . - . ID=gene-C9F07_03480;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=C9F07_03480 PYKI01000450.1 Protein Homology CDS 256 1155 . - 0 ID=cds-TGE19979.1;Parent=gene-C9F07_03480;Dbxref=NCBI_GP:TGE19979.1;Name=TGE19979.1;gbkey=CDS;gene=yegS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991989.1;locus_tag=C9F07_03480;product=lipid kinase YegS;protein_id=TGE19979.1;transl_table=11 PYKI01000450.1 Genbank gene 1711 2046 . + . ID=gene-C9F07_03485;Name=C9F07_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03485 PYKI01000450.1 Protein Homology CDS 1711 2046 . + 0 ID=cds-TGE19980.1;Parent=gene-C9F07_03485;Dbxref=NCBI_GP:TGE19980.1;Name=TGE19980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=C9F07_03485;product=hypothetical protein;protein_id=TGE19980.1;transl_table=11 PYKI01000450.1 Genbank gene 2168 2584 . + . ID=gene-C9F07_03490;Name=C9F07_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03490 PYKI01000450.1 Protein Homology CDS 2168 2584 . + 0 ID=cds-TGE19981.1;Parent=gene-C9F07_03490;Dbxref=NCBI_GP:TGE19981.1;Name=TGE19981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456697.1;locus_tag=C9F07_03490;product=CesT family type III secretion system chaperone;protein_id=TGE19981.1;transl_table=11 ##sequence-region PYKI01003303.1 1 2667 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003303.1 Genbank region 1 2667 . + . ID=PYKI01003303.1:1..2667;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003303.1 Genbank gene 1 600 . - . ID=gene-C9F07_33215;Name=C9F07_33215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33215;partial=true;start_range=.,1 PYKI01003303.1 Protein Homology CDS 1 600 . - 0 ID=cds-TGD36039.1;Parent=gene-C9F07_33215;Dbxref=NCBI_GP:TGD36039.1;Name=TGD36039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=C9F07_33215;partial=true;product=flagellar transcriptional regulator FlhC;protein_id=TGD36039.1;start_range=.,1;transl_table=11 PYKI01003303.1 Genbank gene 597 947 . - . ID=gene-C9F07_33220;Name=C9F07_33220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33220 PYKI01003303.1 Protein Homology CDS 597 947 . - 0 ID=cds-TGD36036.1;Parent=gene-C9F07_33220;Dbxref=NCBI_GP:TGD36036.1;Name=TGD36036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456491.1;locus_tag=C9F07_33220;product=flagellar transcriptional regulator FlhD;protein_id=TGD36036.1;transl_table=11 PYKI01003303.1 Genbank gene 1621 1737 . + . ID=gene-C9F07_33225;Name=C9F07_33225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33225 PYKI01003303.1 Protein Homology CDS 1621 1737 . + 0 ID=cds-TGD36037.1;Parent=gene-C9F07_33225;Dbxref=NCBI_GP:TGD36037.1;Name=TGD36037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=C9F07_33225;product=hypothetical protein;protein_id=TGD36037.1;transl_table=11 PYKI01003303.1 Genbank gene 1734 2162 . + . ID=gene-C9F07_33230;Name=C9F07_33230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33230 PYKI01003303.1 Protein Homology CDS 1734 2162 . + 0 ID=cds-TGD36038.1;Parent=gene-C9F07_33230;Dbxref=NCBI_GP:TGD36038.1;Name=TGD36038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=C9F07_33230;product=universal stress protein UspC;protein_id=TGD36038.1;transl_table=11 PYKI01003303.1 Genbank pseudogene 2180 2667 . - . ID=gene-C9F07_33235;Name=C9F07_33235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33235;pseudo=true PYKI01003303.1 Protein Homology CDS 2180 2667 . - 2 ID=cds-C9F07_33235;Parent=gene-C9F07_33235;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456494.1;locus_tag=C9F07_33235;product=alpha%2Calpha-trehalose-phosphate synthase;pseudo=true;transl_table=11 ##sequence-region PYKI01003437.1 1 2662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003437.1 Genbank region 1 2662 . + . ID=PYKI01003437.1:1..2662;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003437.1 Genbank gene 1 733 . + . ID=gene-C9F07_34555;Name=C9F07_34555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34555;partial=true;start_range=.,1 PYKI01003437.1 Protein Homology CDS 1 733 . + 1 ID=cds-TGD33471.1;Parent=gene-C9F07_34555;Dbxref=NCBI_GP:TGD33471.1;Name=TGD33471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=C9F07_34555;partial=true;product=hypothetical protein;protein_id=TGD33471.1;start_range=.,1;transl_table=11 PYKI01003437.1 Genbank gene 797 1597 . + . ID=gene-C9F07_34560;Name=C9F07_34560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34560 PYKI01003437.1 Protein Homology CDS 797 1597 . + 0 ID=cds-TGD33472.1;Parent=gene-C9F07_34560;Dbxref=NCBI_GP:TGD33472.1;Name=TGD33472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455864.1;locus_tag=C9F07_34560;product=hypothetical protein;protein_id=TGD33472.1;transl_table=11 PYKI01003437.1 Genbank gene 1714 2244 . + . ID=gene-C9F07_34565;Name=C9F07_34565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34565 PYKI01003437.1 Protein Homology CDS 1714 2244 . + 0 ID=cds-TGD33473.1;Parent=gene-C9F07_34565;Dbxref=NCBI_GP:TGD33473.1;Name=TGD33473.1;Note=B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=C9F07_34565;product=cytochrome B;protein_id=TGD33473.1;transl_table=11 PYKI01003437.1 Genbank gene 2516 2662 . - . ID=gene-C9F07_34570;Name=C9F07_34570;end_range=2662,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34570;partial=true PYKI01003437.1 Protein Homology CDS 2516 2662 . - 0 ID=cds-TGD33474.1;Parent=gene-C9F07_34570;Dbxref=NCBI_GP:TGD33474.1;Name=TGD33474.1;end_range=2662,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551832.1;locus_tag=C9F07_34570;partial=true;product=class I SAM-dependent methyltransferase;protein_id=TGD33474.1;transl_table=11 ##sequence-region PYKI01000402.1 1 2662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000402.1 Genbank region 1 2662 . + . ID=PYKI01000402.1:1..2662;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000402.1 Genbank gene 1 837 . - . ID=gene-C9F07_03070;Name=C9F07_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03070;partial=true;start_range=.,1 PYKI01000402.1 Protein Homology CDS 1 837 . - 0 ID=cds-TGE22763.1;Parent=gene-C9F07_03070;Dbxref=NCBI_GP:TGE22763.1;Name=TGE22763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=C9F07_03070;partial=true;product=nucleobase:cation symporter;protein_id=TGE22763.1;start_range=.,1;transl_table=11 PYKI01000402.1 Genbank gene 895 2040 . - . ID=gene-C9F07_03075;Name=C9F07_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03075 PYKI01000402.1 Protein Homology CDS 895 2040 . - 0 ID=cds-TGE22765.1;Parent=gene-C9F07_03075;Dbxref=NCBI_GP:TGE22765.1;Name=TGE22765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458288.1;locus_tag=C9F07_03075;product=aryl sulfotransferase;protein_id=TGE22765.1;transl_table=11 PYKI01000402.1 Genbank gene 2169 2662 . + . ID=gene-C9F07_03080;Name=C9F07_03080;end_range=2662,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03080;partial=true PYKI01000402.1 Protein Homology CDS 2169 2662 . + 0 ID=cds-TGE22764.1;Parent=gene-C9F07_03080;Dbxref=NCBI_GP:TGE22764.1;Name=TGE22764.1;end_range=2662,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=C9F07_03080;partial=true;product=LacI family transcriptional regulator;protein_id=TGE22764.1;transl_table=11 ##sequence-region PYKI01002272.1 1 2662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002272.1 Genbank region 1 2662 . + . ID=PYKI01002272.1:1..2662;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002272.1 Genbank gene 248 838 . + . ID=gene-C9F07_22230;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=C9F07_22230 PYKI01002272.1 Protein Homology CDS 248 838 . + 0 ID=cds-TGD55195.1;Parent=gene-C9F07_22230;Dbxref=NCBI_GP:TGD55195.1;Name=TGD55195.1;gbkey=CDS;gene=ribA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455786.1;locus_tag=C9F07_22230;product=GTP cyclohydrolase II;protein_id=TGD55195.1;transl_table=11 PYKI01002272.1 Genbank gene 894 2662 . - . ID=gene-C9F07_22235;Name=acnA;end_range=2662,.;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=C9F07_22235;partial=true PYKI01002272.1 Protein Homology CDS 894 2662 . - 2 ID=cds-TGD55196.1;Parent=gene-C9F07_22235;Dbxref=NCBI_GP:TGD55196.1;Name=TGD55196.1;end_range=2662,.;gbkey=CDS;gene=acnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=C9F07_22235;partial=true;product=aconitate hydratase AcnA;protein_id=TGD55196.1;transl_table=11 ##sequence-region PYKI01002352.1 1 2658 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002352.1 Genbank region 1 2658 . + . ID=PYKI01002352.1:1..2658;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002352.1 Genbank gene 1 266 . - . ID=gene-C9F07_23095;Name=C9F07_23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23095;partial=true;start_range=.,1 PYKI01002352.1 Protein Homology CDS 1 266 . - 0 ID=cds-TGD53204.1;Parent=gene-C9F07_23095;Dbxref=NCBI_GP:TGD53204.1;Name=TGD53204.1;Note=catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457369.1;locus_tag=C9F07_23095;partial=true;product=L-fuculose phosphate aldolase;protein_id=TGD53204.1;start_range=.,1;transl_table=11 PYKI01002352.1 Genbank gene 822 2138 . + . ID=gene-C9F07_23100;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=C9F07_23100 PYKI01002352.1 Protein Homology CDS 822 2138 . + 0 ID=cds-TGD53202.1;Parent=gene-C9F07_23100;Dbxref=NCBI_GP:TGD53202.1;Name=TGD53202.1;gbkey=CDS;gene=fucP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457370.1;locus_tag=C9F07_23100;product=L-fucose:H+ symporter permease;protein_id=TGD53202.1;transl_table=11 PYKI01002352.1 Genbank gene 2170 2658 . + . ID=gene-C9F07_23105;Name=fucI;end_range=2658,.;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=C9F07_23105;partial=true PYKI01002352.1 Protein Homology CDS 2170 2658 . + 0 ID=cds-TGD53203.1;Parent=gene-C9F07_23105;Dbxref=NCBI_GP:TGD53203.1;Name=TGD53203.1;Note=catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose;end_range=2658,.;gbkey=CDS;gene=fucI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457371.1;locus_tag=C9F07_23105;partial=true;product=L-fucose isomerase;protein_id=TGD53203.1;transl_table=11 ##sequence-region PYKI01001738.1 1 2655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001738.1 Genbank region 1 2655 . + . ID=PYKI01001738.1:1..2655;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001738.1 Genbank gene 53 568 . - . ID=gene-C9F07_16615;Name=C9F07_16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16615 PYKI01001738.1 Protein Homology CDS 53 568 . - 0 ID=cds-TGD68486.1;Parent=gene-C9F07_16615;Dbxref=NCBI_GP:TGD68486.1;Name=TGD68486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456792.1;locus_tag=C9F07_16615;product=cytochrome c-type biogenesis protein H1;protein_id=TGD68486.1;transl_table=11 PYKI01001738.1 Genbank gene 565 1122 . - . ID=gene-C9F07_16620;Name=C9F07_16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16620 PYKI01001738.1 Protein Homology CDS 565 1122 . - 0 ID=cds-TGD68487.1;Parent=gene-C9F07_16620;Dbxref=NCBI_GP:TGD68487.1;Name=TGD68487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456793.1;locus_tag=C9F07_16620;product=thiol:disulfide interchange protein;protein_id=TGD68487.1;transl_table=11 PYKI01001738.1 Genbank gene 1119 2655 . - . ID=gene-C9F07_16625;Name=C9F07_16625;end_range=2655,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16625;partial=true PYKI01001738.1 Protein Homology CDS 1119 2655 . - 1 ID=cds-TGD68488.1;Parent=gene-C9F07_16625;Dbxref=NCBI_GP:TGD68488.1;Name=TGD68488.1;Note=cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c;end_range=2655,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456794.1;locus_tag=C9F07_16625;partial=true;product=heme lyase NrfEFG subunit NrfE;protein_id=TGD68488.1;transl_table=11 ##sequence-region PYKI01000515.1 1 2648 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000515.1 Genbank region 1 2648 . + . ID=PYKI01000515.1:1..2648;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000515.1 Genbank gene 61 330 . + . ID=gene-C9F07_04270;Name=C9F07_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04270 PYKI01000515.1 GeneMarkS+ CDS 61 330 . + 0 ID=cds-TGE16529.1;Parent=gene-C9F07_04270;Dbxref=NCBI_GP:TGE16529.1;Name=TGE16529.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F07_04270;product=hypothetical protein;protein_id=TGE16529.1;transl_table=11 PYKI01000515.1 Genbank gene 375 2036 . + . ID=gene-C9F07_04275;Name=C9F07_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04275 PYKI01000515.1 Protein Homology CDS 375 2036 . + 0 ID=cds-TGE16531.1;Parent=gene-C9F07_04275;Dbxref=NCBI_GP:TGE16531.1;Name=TGE16531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001615170.1;locus_tag=C9F07_04275;product=hypothetical protein;protein_id=TGE16531.1;transl_table=11 PYKI01000515.1 Genbank gene 2008 2648 . + . ID=gene-C9F07_04280;Name=C9F07_04280;end_range=2648,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04280;partial=true PYKI01000515.1 Protein Homology CDS 2008 2648 . + 0 ID=cds-TGE16530.1;Parent=gene-C9F07_04280;Dbxref=NCBI_GP:TGE16530.1;Name=TGE16530.1;end_range=2648,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001588220.1;locus_tag=C9F07_04280;partial=true;product=GTP-binding protein;protein_id=TGE16530.1;transl_table=11 ##sequence-region PYKI01001694.1 1 2646 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001694.1 Genbank region 1 2646 . + . ID=PYKI01001694.1:1..2646;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001694.1 Genbank gene 1 834 . - . ID=gene-C9F07_16155;Name=C9F07_16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16155;partial=true;start_range=.,1 PYKI01001694.1 Protein Homology CDS 1 834 . - 0 ID=cds-TGD69713.1;Parent=gene-C9F07_16155;Dbxref=NCBI_GP:TGD69713.1;Name=TGD69713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457806.1;locus_tag=C9F07_16155;partial=true;product=hypothetical protein;protein_id=TGD69713.1;start_range=.,1;transl_table=11 PYKI01001694.1 Genbank gene 1020 1223 . + . ID=gene-C9F07_16160;Name=C9F07_16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16160 PYKI01001694.1 Protein Homology CDS 1020 1223 . + 0 ID=cds-TGD69710.1;Parent=gene-C9F07_16160;Dbxref=NCBI_GP:TGD69710.1;Name=TGD69710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457805.1;locus_tag=C9F07_16160;product=lipoprotein;protein_id=TGD69710.1;transl_table=11 PYKI01001694.1 Genbank gene 1260 2084 . + . ID=gene-C9F07_16165;Name=C9F07_16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16165 PYKI01001694.1 Protein Homology CDS 1260 2084 . + 0 ID=cds-TGD69711.1;Parent=gene-C9F07_16165;Dbxref=NCBI_GP:TGD69711.1;Name=TGD69711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=C9F07_16165;product=diaminopimelate epimerase;protein_id=TGD69711.1;transl_table=11 PYKI01001694.1 Genbank gene 2081 2646 . + . ID=gene-C9F07_16170;Name=C9F07_16170;end_range=2646,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16170;partial=true PYKI01001694.1 Protein Homology CDS 2081 2646 . + 0 ID=cds-TGD69712.1;Parent=gene-C9F07_16170;Dbxref=NCBI_GP:TGD69712.1;Name=TGD69712.1;end_range=2646,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457803.1;locus_tag=C9F07_16170;partial=true;product=DUF484 family protein;protein_id=TGD69712.1;transl_table=11 ##sequence-region PYKI01000335.1 1 2645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000335.1 Genbank region 1 2645 . + . ID=PYKI01000335.1:1..2645;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000335.1 Genbank gene 1 722 . - . ID=gene-C9F07_02420;Name=C9F07_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02420;partial=true;start_range=.,1 PYKI01000335.1 Protein Homology CDS 1 722 . - 0 ID=cds-TGE26848.1;Parent=gene-C9F07_02420;Dbxref=NCBI_GP:TGE26848.1;Name=TGE26848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=C9F07_02420;partial=true;product=hypothetical protein;protein_id=TGE26848.1;start_range=.,1;transl_table=11 PYKI01000335.1 Genbank gene 719 2158 . - . ID=gene-C9F07_02425;Name=C9F07_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02425 PYKI01000335.1 Protein Homology CDS 719 2158 . - 0 ID=cds-TGE26849.1;Parent=gene-C9F07_02425;Dbxref=NCBI_GP:TGE26849.1;Name=TGE26849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457234.1;locus_tag=C9F07_02425;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=TGE26849.1;transl_table=11 PYKI01000335.1 Genbank gene 2344 2645 . + . ID=gene-C9F07_02430;Name=C9F07_02430;end_range=2645,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02430;partial=true PYKI01000335.1 Protein Homology CDS 2344 2645 . + 0 ID=cds-TGE26850.1;Parent=gene-C9F07_02430;Dbxref=NCBI_GP:TGE26850.1;Name=TGE26850.1;Note=Required for the expression of anaerobic nitric oxide (NO) reductase%3B acts as a transcriptional activator for the norVW operon;end_range=2645,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457233.1;locus_tag=C9F07_02430;partial=true;product=nitric oxide reductase transcription regulator;protein_id=TGE26850.1;transl_table=11 ##sequence-region PYKI01002771.1 1 2643 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002771.1 Genbank region 1 2643 . + . ID=PYKI01002771.1:1..2643;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002771.1 Genbank gene 1 790 . - . ID=gene-C9F07_27695;Name=C9F07_27695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27695;partial=true;start_range=.,1 PYKI01002771.1 Protein Homology CDS 1 790 . - 0 ID=cds-TGD46431.1;Parent=gene-C9F07_27695;Dbxref=NCBI_GP:TGD46431.1;Name=TGD46431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458517.1;locus_tag=C9F07_27695;partial=true;product=PTS sugar transporter;protein_id=TGD46431.1;start_range=.,1;transl_table=11 PYKI01002771.1 Genbank gene 1281 2573 . - . ID=gene-C9F07_27700;Name=C9F07_27700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27700 PYKI01002771.1 Protein Homology CDS 1281 2573 . - 0 ID=cds-TGD46432.1;Parent=gene-C9F07_27700;Dbxref=NCBI_GP:TGD46432.1;Name=TGD46432.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458518.1;locus_tag=C9F07_27700;product=lysine-sensitive aspartokinase 3;protein_id=TGD46432.1;transl_table=11 ##sequence-region PYKI01003341.1 1 2641 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003341.1 Genbank region 1 2641 . + . ID=PYKI01003341.1:1..2641;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003341.1 Genbank gene 174 836 . - . ID=gene-C9F07_33610;Name=C9F07_33610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33610 PYKI01003341.1 Protein Homology CDS 174 836 . - 0 ID=cds-TGD35071.1;Parent=gene-C9F07_33610;Dbxref=NCBI_GP:TGD35071.1;Name=TGD35071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458280.1;locus_tag=C9F07_33610;product=OmpA family lipoprotein;protein_id=TGD35071.1;transl_table=11 PYKI01003341.1 Genbank gene 989 2641 . + . ID=gene-C9F07_33615;Name=C9F07_33615;end_range=2641,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33615;partial=true PYKI01003341.1 Protein Homology CDS 989 2641 . + 0 ID=cds-TGD35072.1;Parent=gene-C9F07_33615;Dbxref=NCBI_GP:TGD35072.1;Name=TGD35072.1;Note=catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine;end_range=2641,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=C9F07_33615;partial=true;product=trimethylamine-N-oxide reductase TorA;protein_id=TGD35072.1;transl_table=11 ##sequence-region PYKI01003459.1 1 2637 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003459.1 Genbank region 1 2637 . + . ID=PYKI01003459.1:1..2637;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003459.1 Genbank gene 1 682 . + . ID=gene-C9F07_34775;Name=C9F07_34775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34775;partial=true;start_range=.,1 PYKI01003459.1 Protein Homology CDS 1 682 . + 1 ID=cds-TGD32939.1;Parent=gene-C9F07_34775;Dbxref=NCBI_GP:TGD32939.1;Name=TGD32939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=C9F07_34775;partial=true;product=fatty acid metabolism transcriptional regulator FadR;protein_id=TGD32939.1;start_range=.,1;transl_table=11 PYKI01003459.1 Genbank gene 729 2261 . - . ID=gene-C9F07_34780;Name=C9F07_34780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34780 PYKI01003459.1 Protein Homology CDS 729 2261 . - 0 ID=cds-TGD32940.1;Parent=gene-C9F07_34780;Dbxref=NCBI_GP:TGD32940.1;Name=TGD32940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456311.1;locus_tag=C9F07_34780;product=SpoVR family protein;protein_id=TGD32940.1;transl_table=11 ##sequence-region PYKI01002021.1 1 2637 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002021.1 Genbank region 1 2637 . + . ID=PYKI01002021.1:1..2637;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002021.1 Genbank gene 1 450 . + . ID=gene-C9F07_19490;Name=C9F07_19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19490;partial=true;start_range=.,1 PYKI01002021.1 Protein Homology CDS 1 450 . + 0 ID=cds-TGD60066.1;Parent=gene-C9F07_19490;Dbxref=NCBI_GP:TGD60066.1;Name=TGD60066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457577.1;locus_tag=C9F07_19490;partial=true;product=ADP-ribose diphosphatase;protein_id=TGD60066.1;start_range=.,1;transl_table=11 PYKI01002021.1 Genbank gene 447 869 . + . ID=gene-C9F07_19495;Name=C9F07_19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19495 PYKI01002021.1 Protein Homology CDS 447 869 . + 0 ID=cds-TGD60067.1;Parent=gene-C9F07_19495;Dbxref=NCBI_GP:TGD60067.1;Name=TGD60067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457576.1;locus_tag=C9F07_19495;product=hypothetical protein;protein_id=TGD60067.1;transl_table=11 PYKI01002021.1 Genbank gene 1065 1721 . + . ID=gene-C9F07_19500;Name=C9F07_19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19500 PYKI01002021.1 Protein Homology CDS 1065 1721 . + 0 ID=cds-TGD60068.1;Parent=gene-C9F07_19500;Dbxref=NCBI_GP:TGD60068.1;Name=TGD60068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001726458.1;locus_tag=C9F07_19500;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=TGD60068.1;transl_table=11 PYKI01002021.1 Genbank gene 1721 2302 . + . ID=gene-C9F07_19505;Name=C9F07_19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19505 PYKI01002021.1 Protein Homology CDS 1721 2302 . + 0 ID=cds-TGD60069.1;Parent=gene-C9F07_19505;Dbxref=NCBI_GP:TGD60069.1;Name=TGD60069.1;Note=Displays esterase activity toward palmitoyl-CoA and pNP-butyrate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457574.1;locus_tag=C9F07_19505;product=esterase YqiA;protein_id=TGD60069.1;transl_table=11 PYKI01002021.1 Genbank gene 2330 2637 . + . ID=gene-C9F07_19510;Name=C9F07_19510;end_range=2637,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19510;partial=true PYKI01002021.1 Protein Homology CDS 2330 2637 . + 0 ID=cds-TGD60070.1;Parent=gene-C9F07_19510;Dbxref=NCBI_GP:TGD60070.1;Name=TGD60070.1;end_range=2637,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311945.1;locus_tag=C9F07_19510;partial=true;product=DNA topoisomerase IV;protein_id=TGD60070.1;transl_table=11 ##sequence-region PYKI01003425.1 1 2635 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003425.1 Genbank region 1 2635 . + . ID=PYKI01003425.1:1..2635;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003425.1 Genbank gene 11 1906 . - . ID=gene-C9F07_34430;Name=C9F07_34430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34430 PYKI01003425.1 Protein Homology CDS 11 1906 . - 0 ID=cds-TGD33581.1;Parent=gene-C9F07_34430;Dbxref=NCBI_GP:TGD33581.1;Name=TGD33581.1;Note=catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457910.1;locus_tag=C9F07_34430;product=phosphomethylpyrimidine synthase ThiC;protein_id=TGD33581.1;transl_table=11 PYKI01003425.1 cmsearch riboswitch 1992 2155 . - . ID=id-PYKI01003425.1:1992..2155;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00059,COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PYKI01003425.1 Genbank gene 2270 2635 . - . ID=gene-C9F07_34435;Name=C9F07_34435;end_range=2635,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34435;partial=true PYKI01003425.1 Protein Homology CDS 2270 2635 . - 0 ID=cds-TGD33582.1;Parent=gene-C9F07_34435;Dbxref=NCBI_GP:TGD33582.1;Name=TGD33582.1;end_range=2635,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457909.1;locus_tag=C9F07_34435;partial=true;product=sigma D regulator;protein_id=TGD33582.1;transl_table=11 ##sequence-region PYKI01003506.1 1 2633 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003506.1 Genbank region 1 2633 . + . ID=PYKI01003506.1:1..2633;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003506.1 Genbank gene 1 722 . - . ID=gene-C9F07_35320;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=C9F07_35320;partial=true;start_range=.,1 PYKI01003506.1 Protein Homology CDS 1 722 . - 0 ID=cds-TGD31898.1;Parent=gene-C9F07_35320;Dbxref=NCBI_GP:TGD31898.1;Name=TGD31898.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=C9F07_35320;partial=true;product=propanediol diffusion facilitator PduF;protein_id=TGD31898.1;start_range=.,1;transl_table=11 PYKI01003506.1 Genbank gene 1247 1531 . + . ID=gene-C9F07_35325;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=C9F07_35325 PYKI01003506.1 Protein Homology CDS 1247 1531 . + 0 ID=cds-TGD31899.1;Parent=gene-C9F07_35325;Dbxref=NCBI_GP:TGD31899.1;Name=TGD31899.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456588.1;locus_tag=C9F07_35325;product=propanediol utilization microcompartment protein PduA;protein_id=TGD31899.1;transl_table=11 PYKI01003506.1 Genbank gene 1528 2340 . + . ID=gene-C9F07_35330;Name=C9F07_35330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35330 PYKI01003506.1 Protein Homology CDS 1528 2340 . + 0 ID=cds-TGD31900.1;Parent=gene-C9F07_35330;Dbxref=NCBI_GP:TGD31900.1;Name=TGD31900.1;Note=carboxysome shell protein%3B may be involved in the formation of the polyhedral organelles involved in propanediol degradation;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002413051.1;locus_tag=C9F07_35330;product=propanediol utilization microcompartment protein PduB;protein_id=TGD31900.1;transl_table=11 PYKI01003506.1 Genbank pseudogene 2359 2511 . + . ID=gene-C9F07_35335;Name=C9F07_35335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35335;pseudo=true PYKI01003506.1 Protein Homology CDS 2359 2511 . + 0 ID=cds-C9F07_35335;Parent=gene-C9F07_35335;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456590.1;locus_tag=C9F07_35335;product=propanediol dehydratase;pseudo=true;transl_table=11 ##sequence-region PYKI01002774.1 1 2629 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002774.1 Genbank region 1 2629 . + . ID=PYKI01002774.1:1..2629;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002774.1 Genbank pseudogene 55 1281 . - . ID=gene-C9F07_27715;Name=C9F07_27715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27715;pseudo=true PYKI01002774.1 Protein Homology CDS 55 1281 . - 0 ID=cds-C9F07_27715;Parent=gene-C9F07_27715;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=C9F07_27715;product=peptidylprolyl isomerase;pseudo=true;transl_table=11 PYKI01002774.1 Genbank gene 1572 1844 . - . ID=gene-C9F07_27720;Name=C9F07_27720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27720 PYKI01002774.1 Protein Homology CDS 1572 1844 . - 0 ID=cds-TGD46393.1;Parent=gene-C9F07_27720;Dbxref=NCBI_GP:TGD46393.1;Name=TGD46393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1;locus_tag=C9F07_27720;product=DNA-binding protein HU-beta;protein_id=TGD46393.1;transl_table=11 PYKI01002774.1 Genbank gene 2053 2629 . - . ID=gene-C9F07_27725;Name=C9F07_27725;end_range=2629,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27725;partial=true PYKI01002774.1 Protein Homology CDS 2053 2629 . - 1 ID=cds-TGD46394.1;Parent=gene-C9F07_27725;Dbxref=NCBI_GP:TGD46394.1;Name=TGD46394.1;end_range=2629,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308520.1;locus_tag=C9F07_27725;partial=true;product=hypothetical protein;protein_id=TGD46394.1;transl_table=11 ##sequence-region PYKI01003416.1 1 2627 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003416.1 Genbank region 1 2627 . + . ID=PYKI01003416.1:1..2627;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003416.1 Genbank gene 71 1141 . - . ID=gene-C9F07_34355;Name=C9F07_34355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34355 PYKI01003416.1 Protein Homology CDS 71 1141 . - 0 ID=cds-TGD33707.1;Parent=gene-C9F07_34355;Dbxref=NCBI_GP:TGD33707.1;Name=TGD33707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457140.1;locus_tag=C9F07_34355;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=TGD33707.1;transl_table=11 PYKI01003416.1 Genbank gene 1580 2098 . + . ID=gene-C9F07_34360;Name=C9F07_34360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34360 PYKI01003416.1 Protein Homology CDS 1580 2098 . + 0 ID=cds-TGD33708.1;Parent=gene-C9F07_34360;Dbxref=NCBI_GP:TGD33708.1;Name=TGD33708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=C9F07_34360;product=DUF4154 domain-containing protein;protein_id=TGD33708.1;transl_table=11 PYKI01003416.1 Genbank gene 2091 2627 . + . ID=gene-C9F07_34365;Name=C9F07_34365;end_range=2627,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34365;partial=true PYKI01003416.1 Protein Homology CDS 2091 2627 . + 0 ID=cds-TGD33709.1;Parent=gene-C9F07_34365;Dbxref=NCBI_GP:TGD33709.1;Name=TGD33709.1;end_range=2627,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=C9F07_34365;partial=true;product=GGDEF domain-containing protein;protein_id=TGD33709.1;transl_table=11 ##sequence-region PYKI01001529.1 1 2627 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001529.1 Genbank region 1 2627 . + . ID=PYKI01001529.1:1..2627;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001529.1 Genbank gene 1 1880 . - . ID=gene-C9F07_14595;Name=C9F07_14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14595;partial=true;start_range=.,1 PYKI01001529.1 Protein Homology CDS 1 1880 . - 0 ID=cds-TGD76356.1;Parent=gene-C9F07_14595;Dbxref=NCBI_GP:TGD76356.1;Name=TGD76356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459446.1;locus_tag=C9F07_14595;partial=true;product=endopeptidase La;protein_id=TGD76356.1;start_range=.,1;transl_table=11 PYKI01001529.1 Genbank gene 2066 2627 . - . ID=gene-C9F07_14600;Name=clpX;end_range=2627,.;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=C9F07_14600;partial=true PYKI01001529.1 Protein Homology CDS 2066 2627 . - 1 ID=cds-TGD76357.1;Parent=gene-C9F07_14600;Dbxref=NCBI_GP:TGD76357.1;Name=TGD76357.1;Note=binds and unfolds substrates as part of the ClpXP protease;end_range=2627,.;gbkey=CDS;gene=clpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=C9F07_14600;partial=true;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=TGD76357.1;transl_table=11 ##sequence-region PYKI01003363.1 1 2620 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003363.1 Genbank region 1 2620 . + . ID=PYKI01003363.1:1..2620;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003363.1 Genbank gene 1 1483 . + . ID=gene-C9F07_33865;Name=C9F07_33865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33865;partial=true;start_range=.,1 PYKI01003363.1 Protein Homology CDS 1 1483 . + 1 ID=cds-TGD34722.1;Parent=gene-C9F07_33865;Dbxref=NCBI_GP:TGD34722.1;Name=TGD34722.1;Note=SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456217.1;locus_tag=C9F07_33865;partial=true;product=signal peptide peptidase SppA;protein_id=TGD34722.1;start_range=.,1;transl_table=11 PYKI01003363.1 Genbank gene 1579 2595 . + . ID=gene-C9F07_33870;Name=C9F07_33870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33870 PYKI01003363.1 Protein Homology CDS 1579 2595 . + 0 ID=cds-TGD34723.1;Parent=gene-C9F07_33870;Dbxref=NCBI_GP:TGD34723.1;Name=TGD34723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=C9F07_33870;product=L-asparaginase 1;protein_id=TGD34723.1;transl_table=11 ##sequence-region PYKI01003070.1 1 5637 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003070.1 Genbank region 1 5637 . + . ID=PYKI01003070.1:1..5637;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003070.1 Genbank gene 1 158 . + . ID=gene-C9F07_30755;Name=C9F07_30755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30755;partial=true;start_range=.,1 PYKI01003070.1 Protein Homology CDS 1 158 . + 2 ID=cds-TGD40451.1;Parent=gene-C9F07_30755;Dbxref=NCBI_GP:TGD40451.1;Name=TGD40451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664703.1;locus_tag=C9F07_30755;partial=true;product=UDP-glucose--(glucosyl)LPS alpha-1%2C2-glucosyltransferase;protein_id=TGD40451.1;start_range=.,1;transl_table=11 PYKI01003070.1 Genbank gene 215 1429 . - . ID=gene-C9F07_30760;Name=C9F07_30760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30760 PYKI01003070.1 Protein Homology CDS 215 1429 . - 0 ID=cds-TGD40452.1;Parent=gene-C9F07_30760;Dbxref=NCBI_GP:TGD40452.1;Name=TGD40452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=C9F07_30760;product=O-antigen ligase RfaL;protein_id=TGD40452.1;transl_table=11 PYKI01003070.1 Genbank gene 1469 2422 . - . ID=gene-C9F07_30765;Name=C9F07_30765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30765 PYKI01003070.1 Protein Homology CDS 1469 2422 . - 0 ID=cds-TGD40453.1;Parent=gene-C9F07_30765;Dbxref=NCBI_GP:TGD40453.1;Name=TGD40453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458215.1;locus_tag=C9F07_30765;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=TGD40453.1;transl_table=11 PYKI01003070.1 Genbank gene 2422 3468 . - . ID=gene-C9F07_30770;Name=C9F07_30770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30770 PYKI01003070.1 Protein Homology CDS 2422 3468 . - 0 ID=cds-TGD40454.1;Parent=gene-C9F07_30770;Dbxref=NCBI_GP:TGD40454.1;Name=TGD40454.1;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=C9F07_30770;product=ADP-heptose--LPS heptosyltransferase;protein_id=TGD40454.1;transl_table=11 PYKI01003070.1 Genbank gene 3471 4403 . - . ID=gene-C9F07_30775;Name=C9F07_30775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30775 PYKI01003070.1 Protein Homology CDS 3471 4403 . - 0 ID=cds-TGD40455.1;Parent=gene-C9F07_30775;Dbxref=NCBI_GP:TGD40455.1;Name=TGD40455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=C9F07_30775;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=TGD40455.1;transl_table=11 PYKI01003070.1 Genbank gene 4606 5637 . + . ID=gene-C9F07_30780;Name=kbl;end_range=5637,.;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=C9F07_30780;partial=true PYKI01003070.1 Protein Homology CDS 4606 5637 . + 0 ID=cds-TGD40456.1;Parent=gene-C9F07_30780;Dbxref=NCBI_GP:TGD40456.1;Name=TGD40456.1;end_range=5637,.;gbkey=CDS;gene=kbl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=C9F07_30780;partial=true;product=glycine C-acetyltransferase;protein_id=TGD40456.1;transl_table=11 ##sequence-region PYKI01002068.1 1 2618 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002068.1 Genbank region 1 2618 . + . ID=PYKI01002068.1:1..2618;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002068.1 Genbank gene 1 121 . + . ID=gene-C9F07_20015;Name=C9F07_20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20015;partial=true;start_range=.,1 PYKI01002068.1 Protein Homology CDS 1 121 . + 1 ID=cds-TGD59343.1;Parent=gene-C9F07_20015;Dbxref=NCBI_GP:TGD59343.1;Name=TGD59343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=C9F07_20015;partial=true;product=metal-dependent hydrolase;protein_id=TGD59343.1;start_range=.,1;transl_table=11 PYKI01002068.1 Genbank gene 118 1326 . + . ID=gene-C9F07_20020;Name=C9F07_20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20020 PYKI01002068.1 Protein Homology CDS 118 1326 . + 0 ID=cds-TGD59344.1;Parent=gene-C9F07_20020;Dbxref=NCBI_GP:TGD59344.1;Name=TGD59344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=C9F07_20020;product=MFS transporter;protein_id=TGD59344.1;transl_table=11 PYKI01002068.1 Genbank gene 1380 1724 . - . ID=gene-C9F07_20025;Name=C9F07_20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20025 PYKI01002068.1 Protein Homology CDS 1380 1724 . - 0 ID=cds-TGD59345.1;Parent=gene-C9F07_20025;Dbxref=NCBI_GP:TGD59345.1;Name=TGD59345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458848.1;locus_tag=C9F07_20025;product=gamma-glutamylcyclotransferase;protein_id=TGD59345.1;transl_table=11 PYKI01002068.1 Genbank gene 1727 2618 . - . ID=gene-C9F07_20030;Name=C9F07_20030;end_range=2618,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20030;partial=true PYKI01002068.1 Protein Homology CDS 1727 2618 . - 1 ID=cds-TGD59346.1;Parent=gene-C9F07_20030;Dbxref=NCBI_GP:TGD59346.1;Name=TGD59346.1;end_range=2618,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458847.1;locus_tag=C9F07_20030;partial=true;product=hypothetical protein;protein_id=TGD59346.1;transl_table=11 ##sequence-region PYKI01001984.1 1 2618 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001984.1 Genbank region 1 2618 . + . ID=PYKI01001984.1:1..2618;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001984.1 Genbank gene 1 845 . - . ID=gene-C9F07_19130;Name=C9F07_19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19130;partial=true;start_range=.,1 PYKI01001984.1 Protein Homology CDS 1 845 . - 0 ID=cds-TGD60227.1;Parent=gene-C9F07_19130;Dbxref=NCBI_GP:TGD60227.1;Name=TGD60227.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125442.1;locus_tag=C9F07_19130;partial=true;product=cytochrome d terminal oxidase subunit 1;protein_id=TGD60227.1;start_range=.,1;transl_table=11 PYKI01001984.1 Genbank pseudogene 1989 2093 . - . ID=gene-C9F07_19135;Name=C9F07_19135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19135;pseudo=true PYKI01001984.1 Protein Homology CDS 1989 2093 . - 0 ID=cds-C9F07_19135;Parent=gene-C9F07_19135;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022931.1;locus_tag=C9F07_19135;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 PYKI01001984.1 Genbank gene 2429 2618 . - . ID=gene-C9F07_19140;Name=C9F07_19140;end_range=2618,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19140;partial=true PYKI01001984.1 Protein Homology CDS 2429 2618 . - 1 ID=cds-TGD60228.1;Parent=gene-C9F07_19140;Dbxref=NCBI_GP:TGD60228.1;Name=TGD60228.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;end_range=2618,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455295.1;locus_tag=C9F07_19140;partial=true;product=succinate--CoA ligase subunit alpha;protein_id=TGD60228.1;transl_table=11 ##sequence-region PYKI01002960.1 1 2616 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002960.1 Genbank region 1 2616 . + . ID=PYKI01002960.1:1..2616;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002960.1 Genbank gene 46 228 . - . ID=gene-C9F07_29650;Name=C9F07_29650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29650 PYKI01002960.1 Protein Homology CDS 46 228 . - 0 ID=cds-TGD41887.1;Parent=gene-C9F07_29650;Dbxref=NCBI_GP:TGD41887.1;Name=TGD41887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641436.1;locus_tag=C9F07_29650;product=hypothetical protein;protein_id=TGD41887.1;transl_table=11 PYKI01002960.1 Genbank gene 267 488 . + . ID=gene-C9F07_29655;Name=C9F07_29655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29655 PYKI01002960.1 Protein Homology CDS 267 488 . + 0 ID=cds-TGD41888.1;Parent=gene-C9F07_29655;Dbxref=NCBI_GP:TGD41888.1;Name=TGD41888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219346.1;locus_tag=C9F07_29655;product=hypothetical protein;protein_id=TGD41888.1;transl_table=11 PYKI01002960.1 Genbank gene 394 696 . + . ID=gene-C9F07_29660;Name=C9F07_29660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29660 PYKI01002960.1 Protein Homology CDS 394 696 . + 0 ID=cds-TGD41889.1;Parent=gene-C9F07_29660;Dbxref=NCBI_GP:TGD41889.1;Name=TGD41889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458269.1;locus_tag=C9F07_29660;product=lipoprotein;protein_id=TGD41889.1;transl_table=11 PYKI01002960.1 Genbank pseudogene 835 1575 . + . ID=gene-C9F07_29665;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=pseudogene;locus_tag=C9F07_29665;pseudo=true PYKI01002960.1 Protein Homology CDS 835 1575 . + 0 ID=cds-C9F07_29665;Parent=gene-C9F07_29665;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=glyQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458270.1;locus_tag=C9F07_29665;product=glycine--tRNA ligase subunit alpha;pseudo=true;transl_table=11 PYKI01002960.1 Genbank gene 1606 2058 . + . ID=gene-C9F07_29670;Name=C9F07_29670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29670 PYKI01002960.1 Protein Homology CDS 1606 2058 . + 0 ID=cds-TGD41890.1;Parent=gene-C9F07_29670;Dbxref=NCBI_GP:TGD41890.1;Name=TGD41890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002925118.1;locus_tag=C9F07_29670;product=integrase;protein_id=TGD41890.1;transl_table=11 PYKI01002960.1 Genbank gene 1997 2311 . + . ID=gene-C9F07_29675;Name=C9F07_29675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29675 PYKI01002960.1 Protein Homology CDS 1997 2311 . + 0 ID=cds-TGD41891.1;Parent=gene-C9F07_29675;Dbxref=NCBI_GP:TGD41891.1;Name=TGD41891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001337774.1;locus_tag=C9F07_29675;product=transposase;protein_id=TGD41891.1;transl_table=11 PYKI01002960.1 Genbank pseudogene 2451 2540 . + . ID=gene-C9F07_29680;Name=C9F07_29680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29680;pseudo=true PYKI01002960.1 Protein Homology CDS 2451 2540 . + 0 ID=cds-C9F07_29680;Parent=gene-C9F07_29680;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749988.1;locus_tag=C9F07_29680;product=recombinase family protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003284.1 1 2612 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003284.1 Genbank region 1 2612 . + . ID=PYKI01003284.1:1..2612;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003284.1 Genbank gene 1 264 . - . ID=gene-C9F07_33030;Name=C9F07_33030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33030;partial=true;start_range=.,1 PYKI01003284.1 Protein Homology CDS 1 264 . - 0 ID=cds-TGD36130.1;Parent=gene-C9F07_33030;Dbxref=NCBI_GP:TGD36130.1;Name=TGD36130.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=C9F07_33030;partial=true;product=D-serine dehydratase;protein_id=TGD36130.1;start_range=.,1;transl_table=11 PYKI01003284.1 Genbank gene 282 1619 . - . ID=gene-C9F07_33035;Name=C9F07_33035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33035 PYKI01003284.1 Protein Homology CDS 282 1619 . - 0 ID=cds-TGD36131.1;Parent=gene-C9F07_33035;Dbxref=NCBI_GP:TGD36131.1;Name=TGD36131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=C9F07_33035;product=D-serine transporter DsdX;protein_id=TGD36131.1;transl_table=11 PYKI01003284.1 Genbank gene 1845 2612 . + . ID=gene-C9F07_33040;Name=C9F07_33040;end_range=2612,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33040;partial=true PYKI01003284.1 Protein Homology CDS 1845 2612 . + 0 ID=cds-TGD36132.1;Parent=gene-C9F07_33040;Dbxref=NCBI_GP:TGD36132.1;Name=TGD36132.1;end_range=2612,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458137.1;locus_tag=C9F07_33040;partial=true;product=DNA-binding transcriptional regulator DsdC;protein_id=TGD36132.1;transl_table=11 ##sequence-region PYKI01001705.1 1 2608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001705.1 Genbank region 1 2608 . + . ID=PYKI01001705.1:1..2608;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001705.1 Genbank gene 1 309 . - . ID=gene-C9F07_16255;Name=C9F07_16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16255;partial=true;start_range=.,1 PYKI01001705.1 Protein Homology CDS 1 309 . - 0 ID=cds-TGD69381.1;Parent=gene-C9F07_16255;Dbxref=NCBI_GP:TGD69381.1;Name=TGD69381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457053.1;locus_tag=C9F07_16255;partial=true;product=hypothetical protein;protein_id=TGD69381.1;start_range=.,1;transl_table=11 PYKI01001705.1 Genbank gene 323 1597 . - . ID=gene-C9F07_16260;Name=C9F07_16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16260 PYKI01001705.1 Protein Homology CDS 323 1597 . - 0 ID=cds-TGD69382.1;Parent=gene-C9F07_16260;Dbxref=NCBI_GP:TGD69382.1;Name=TGD69382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120428.1;locus_tag=C9F07_16260;product=histidine--tRNA ligase;protein_id=TGD69382.1;transl_table=11 PYKI01001705.1 Genbank gene 1708 2608 . - . ID=gene-C9F07_16265;Name=C9F07_16265;end_range=2608,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16265;partial=true PYKI01001705.1 Protein Homology CDS 1708 2608 . - 1 ID=cds-TGD69383.1;Parent=gene-C9F07_16265;Dbxref=NCBI_GP:TGD69383.1;Name=TGD69383.1;end_range=2608,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=C9F07_16265;partial=true;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=TGD69383.1;transl_table=11 ##sequence-region PYKI01002328.1 1 2603 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002328.1 Genbank region 1 2603 . + . ID=PYKI01002328.1:1..2603;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002328.1 Genbank gene 68 1159 . - . ID=gene-C9F07_22830;Name=C9F07_22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22830 PYKI01002328.1 Protein Homology CDS 68 1159 . - 0 ID=cds-TGD53846.1;Parent=gene-C9F07_22830;Dbxref=NCBI_GP:TGD53846.1;Name=TGD53846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455945.1;locus_tag=C9F07_22830;product=linear amide C-N hydrolase;protein_id=TGD53846.1;transl_table=11 PYKI01002328.1 Genbank pseudogene 1577 2551 . + . ID=gene-C9F07_22835;Name=C9F07_22835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22835;pseudo=true PYKI01002328.1 Protein Homology CDS 1577 2551 . + 0 ID=cds-C9F07_22835;Parent=gene-C9F07_22835;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=C9F07_22835;product=uptake hydrogenase small subunit;pseudo=true;transl_table=11 ##sequence-region PYKI01002842.1 1 2598 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002842.1 Genbank region 1 2598 . + . ID=PYKI01002842.1:1..2598;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002842.1 Genbank gene 1 663 . - . ID=gene-C9F07_28420;Name=C9F07_28420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28420;partial=true;start_range=.,1 PYKI01002842.1 Protein Homology CDS 1 663 . - 0 ID=cds-TGD45561.1;Parent=gene-C9F07_28420;Dbxref=NCBI_GP:TGD45561.1;Name=TGD45561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459348.1;locus_tag=C9F07_28420;partial=true;product=ATPase;protein_id=TGD45561.1;start_range=.,1;transl_table=11 PYKI01002842.1 Genbank gene 940 2166 . + . ID=gene-C9F07_28425;Name=C9F07_28425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28425 PYKI01002842.1 Protein Homology CDS 940 2166 . + 0 ID=cds-TGD45562.1;Parent=gene-C9F07_28425;Dbxref=NCBI_GP:TGD45562.1;Name=TGD45562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=C9F07_28425;product=efflux transporter periplasmic adaptor subunit;protein_id=TGD45562.1;transl_table=11 PYKI01002842.1 Genbank gene 2163 2598 . + . ID=gene-C9F07_28430;Name=C9F07_28430;end_range=2598,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28430;partial=true PYKI01002842.1 Protein Homology CDS 2163 2598 . + 0 ID=cds-TGD45563.1;Parent=gene-C9F07_28430;Dbxref=NCBI_GP:TGD45563.1;Name=TGD45563.1;end_range=2598,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=C9F07_28430;partial=true;product=multidrug efflux RND transporter permease subunit;protein_id=TGD45563.1;transl_table=11 ##sequence-region PYKI01002574.1 1 2597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002574.1 Genbank region 1 2597 . + . ID=PYKI01002574.1:1..2597;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002574.1 Genbank gene 1 737 . - . ID=gene-C9F07_25555;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=C9F07_25555;partial=true;start_range=.,1 PYKI01002574.1 Protein Homology CDS 1 737 . - 0 ID=cds-TGD49774.1;Parent=gene-C9F07_25555;Dbxref=NCBI_GP:TGD49774.1;Name=TGD49774.1;gbkey=CDS;gene=miaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=C9F07_25555;partial=true;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=TGD49774.1;start_range=.,1;transl_table=11 PYKI01002574.1 Genbank gene 749 1165 . - . ID=gene-C9F07_25560;Name=C9F07_25560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25560 PYKI01002574.1 Protein Homology CDS 749 1165 . - 0 ID=cds-TGD49771.1;Parent=gene-C9F07_25560;Dbxref=NCBI_GP:TGD49771.1;Name=TGD49771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458887.1;locus_tag=C9F07_25560;product=regulator of ribonuclease activity B;protein_id=TGD49771.1;transl_table=11 PYKI01002574.1 Genbank gene 1331 2335 . + . ID=gene-C9F07_25565;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=C9F07_25565 PYKI01002574.1 Protein Homology CDS 1331 2335 . + 0 ID=cds-TGD49772.1;Parent=gene-C9F07_25565;Dbxref=NCBI_GP:TGD49772.1;Name=TGD49772.1;gbkey=CDS;gene=argF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=C9F07_25565;product=ornithine carbamoyltransferase;protein_id=TGD49772.1;transl_table=11 PYKI01002574.1 Genbank gene 2408 2597 . - . ID=gene-C9F07_25570;Name=C9F07_25570;end_range=2597,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25570;partial=true PYKI01002574.1 Protein Homology CDS 2408 2597 . - 1 ID=cds-TGD49773.1;Parent=gene-C9F07_25570;Dbxref=NCBI_GP:TGD49773.1;Name=TGD49773.1;end_range=2597,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313256.2;locus_tag=C9F07_25570;partial=true;product=YhcH/YjgK/YiaL family protein;protein_id=TGD49773.1;transl_table=11 ##sequence-region PYKI01003071.1 1 2594 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003071.1 Genbank region 1 2594 . + . ID=PYKI01003071.1:1..2594;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003071.1 Genbank gene 1 245 . - . ID=gene-C9F07_30785;Name=C9F07_30785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30785;partial=true;start_range=.,1 PYKI01003071.1 Protein Homology CDS 1 245 . - 0 ID=cds-TGD40446.1;Parent=gene-C9F07_30785;Dbxref=NCBI_GP:TGD40446.1;Name=TGD40446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462032.1;locus_tag=C9F07_30785;partial=true;product=VOC family virulence protein;protein_id=TGD40446.1;start_range=.,1;transl_table=11 PYKI01003071.1 Genbank gene 256 1581 . - . ID=gene-C9F07_30790;Name=C9F07_30790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30790 PYKI01003071.1 Protein Homology CDS 256 1581 . - 0 ID=cds-TGD40447.1;Parent=gene-C9F07_30790;Dbxref=NCBI_GP:TGD40447.1;Name=TGD40447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462033.1;locus_tag=C9F07_30790;product=4-hydroxybutyrate--acetyl-CoA CoA transferase;protein_id=TGD40447.1;transl_table=11 PYKI01003071.1 Genbank gene 1606 2133 . - . ID=gene-C9F07_30795;Name=C9F07_30795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30795 PYKI01003071.1 Protein Homology CDS 1606 2133 . - 0 ID=cds-TGD40448.1;Parent=gene-C9F07_30795;Dbxref=NCBI_GP:TGD40448.1;Name=TGD40448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462034.1;locus_tag=C9F07_30795;product=molybdenum cofactor biosynthesis protein MoeC;protein_id=TGD40448.1;transl_table=11 PYKI01003071.1 Genbank gene 2157 2594 . - . ID=gene-C9F07_30800;Name=C9F07_30800;end_range=2594,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30800;partial=true PYKI01003071.1 Protein Homology CDS 2157 2594 . - 0 ID=cds-TGD40449.1;Parent=gene-C9F07_30800;Dbxref=NCBI_GP:TGD40449.1;Name=TGD40449.1;end_range=2594,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462035.1;locus_tag=C9F07_30800;partial=true;product=CoA ester lyase;protein_id=TGD40449.1;transl_table=11 ##sequence-region PYKI01001141.1 1 5580 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001141.1 Genbank region 1 5580 . + . ID=PYKI01001141.1:1..5580;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001141.1 Genbank gene 1 738 . + . ID=gene-C9F07_10620;Name=C9F07_10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10620;partial=true;start_range=.,1 PYKI01001141.1 Protein Homology CDS 1 738 . + 0 ID=cds-TGD94262.1;Parent=gene-C9F07_10620;Dbxref=NCBI_GP:TGD94262.1;Name=TGD94262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=C9F07_10620;partial=true;product=hypothetical protein;protein_id=TGD94262.1;start_range=.,1;transl_table=11 PYKI01001141.1 Genbank gene 1128 2237 . + . ID=gene-C9F07_10625;Name=C9F07_10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10625 PYKI01001141.1 Protein Homology CDS 1128 2237 . + 0 ID=cds-TGD94263.1;Parent=gene-C9F07_10625;Dbxref=NCBI_GP:TGD94263.1;Name=TGD94263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=C9F07_10625;product=hypothetical protein;protein_id=TGD94263.1;transl_table=11 PYKI01001141.1 Genbank gene 2451 2687 . - . ID=gene-C9F07_10630;Name=C9F07_10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10630 PYKI01001141.1 Protein Homology CDS 2451 2687 . - 0 ID=cds-TGD94264.1;Parent=gene-C9F07_10630;Dbxref=NCBI_GP:TGD94264.1;Name=TGD94264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455831.3;locus_tag=C9F07_10630;product=YgdI/YgdR family lipoprotein;protein_id=TGD94264.1;transl_table=11 PYKI01001141.1 Genbank gene 2815 3405 . - . ID=gene-C9F07_10635;Name=C9F07_10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10635 PYKI01001141.1 Protein Homology CDS 2815 3405 . - 0 ID=cds-TGD94265.1;Parent=gene-C9F07_10635;Dbxref=NCBI_GP:TGD94265.1;Name=TGD94265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455830.1;locus_tag=C9F07_10635;product=TetR/AcrR family transcriptional regulator;protein_id=TGD94265.1;transl_table=11 PYKI01001141.1 Genbank gene 3483 4196 . + . ID=gene-C9F07_10640;Name=C9F07_10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10640 PYKI01001141.1 Protein Homology CDS 3483 4196 . + 0 ID=cds-TGD94266.1;Parent=gene-C9F07_10640;Dbxref=NCBI_GP:TGD94266.1;Name=TGD94266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455829.1;locus_tag=C9F07_10640;product=oxidoreductase;protein_id=TGD94266.1;transl_table=11 PYKI01001141.1 Genbank gene 4287 5156 . - . ID=gene-C9F07_10645;Name=C9F07_10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10645 PYKI01001141.1 Protein Homology CDS 4287 5156 . - 0 ID=cds-TGD94267.1;Parent=gene-C9F07_10645;Dbxref=NCBI_GP:TGD94267.1;Name=TGD94267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455828.1;locus_tag=C9F07_10645;product=aldo/keto reductase;protein_id=TGD94267.1;transl_table=11 PYKI01001141.1 Genbank gene 5432 5580 . - . ID=gene-C9F07_10650;Name=C9F07_10650;end_range=5580,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10650;partial=true PYKI01001141.1 Protein Homology CDS 5432 5580 . - 2 ID=cds-TGD94268.1;Parent=gene-C9F07_10650;Dbxref=NCBI_GP:TGD94268.1;Name=TGD94268.1;end_range=5580,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=C9F07_10650;partial=true;product=LysR family transcriptional regulator;protein_id=TGD94268.1;transl_table=11 ##sequence-region PYKI01002438.1 1 2591 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002438.1 Genbank region 1 2591 . + . ID=PYKI01002438.1:1..2591;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002438.1 Genbank gene 1 2022 . - . ID=gene-C9F07_24105;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=C9F07_24105;partial=true;start_range=.,1 PYKI01002438.1 Protein Homology CDS 1 2022 . - 0 ID=cds-TGD51105.1;Parent=gene-C9F07_24105;Dbxref=NCBI_GP:TGD51105.1;Name=TGD51105.1;gbkey=CDS;gene=gcvP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=C9F07_24105;partial=true;product=glycine dehydrogenase (aminomethyl-transferring);protein_id=TGD51105.1;start_range=.,1;transl_table=11 PYKI01002438.1 Genbank pseudogene 2185 2586 . - . ID=gene-C9F07_24110;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=pseudogene;locus_tag=C9F07_24110;pseudo=true PYKI01002438.1 Protein Homology CDS 2185 2586 . - 0 ID=cds-C9F07_24110;Parent=gene-C9F07_24110;Note=internal stop;gbkey=CDS;gene=gcvH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=C9F07_24110;product=glycine cleavage system protein H;pseudo=true;transl_table=11 ##sequence-region PYKI01000736.1 1 2586 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000736.1 Genbank region 1 2586 . + . ID=PYKI01000736.1:1..2586;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000736.1 Genbank gene 72 299 . - . ID=gene-C9F07_06465;Name=C9F07_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06465 PYKI01000736.1 Protein Homology CDS 72 299 . - 0 ID=cds-TGE10856.1;Parent=gene-C9F07_06465;Dbxref=NCBI_GP:TGE10856.1;Name=TGE10856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752195.1;locus_tag=C9F07_06465;product=hypothetical protein;protein_id=TGE10856.1;transl_table=11 PYKI01000736.1 Genbank gene 726 1412 . - . ID=gene-C9F07_06470;Name=C9F07_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06470 PYKI01000736.1 Protein Homology CDS 726 1412 . - 0 ID=cds-TGE10857.1;Parent=gene-C9F07_06470;Dbxref=NCBI_GP:TGE10857.1;Name=TGE10857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=C9F07_06470;product=dethiobiotin synthase;protein_id=TGE10857.1;transl_table=11 PYKI01000736.1 Genbank gene 1405 2160 . - . ID=gene-C9F07_06475;Name=C9F07_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06475 PYKI01000736.1 Protein Homology CDS 1405 2160 . - 0 ID=cds-TGE10858.1;Parent=gene-C9F07_06475;Dbxref=NCBI_GP:TGE10858.1;Name=TGE10858.1;Note=methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon (bioABFCD)%3B in Escherichia coli%2C bioC-null mutants require biotin for growth;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=C9F07_06475;product=malonyl-ACP O-methyltransferase BioC;protein_id=TGE10858.1;transl_table=11 PYKI01000736.1 Genbank pseudogene 2144 2503 . - . ID=gene-C9F07_06480;Name=C9F07_06480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06480;pseudo=true PYKI01000736.1 Protein Homology CDS 2144 2503 . - 0 ID=cds-C9F07_06480;Parent=gene-C9F07_06480;Note=catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=C9F07_06480;product=8-amino-7-oxononanoate synthase;pseudo=true;transl_table=11 ##sequence-region PYKI01003197.1 1 2581 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003197.1 Genbank region 1 2581 . + . ID=PYKI01003197.1:1..2581;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003197.1 Genbank pseudogene 39 1550 . - . ID=gene-C9F07_32130;Name=C9F07_32130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32130;pseudo=true PYKI01003197.1 Protein Homology CDS 39 1550 . - 0 ID=cds-C9F07_32130;Parent=gene-C9F07_32130;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=C9F07_32130;product=AsmA family protein;pseudo=true;transl_table=11 PYKI01003197.1 Genbank gene 1671 2581 . - . ID=gene-C9F07_32135;Name=C9F07_32135;end_range=2581,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32135;partial=true PYKI01003197.1 Protein Homology CDS 1671 2581 . - 2 ID=cds-TGD37387.1;Parent=gene-C9F07_32135;Dbxref=NCBI_GP:TGD37387.1;Name=TGD37387.1;Note=high-affinity transporter for xanthine;end_range=2581,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458181.1;locus_tag=C9F07_32135;partial=true;product=xanthine permease XanP;protein_id=TGD37387.1;transl_table=11 ##sequence-region PYKI01000767.1 1 2575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000767.1 Genbank region 1 2575 . + . ID=PYKI01000767.1:1..2575;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000767.1 Genbank gene 1 634 . + . ID=gene-C9F07_06765;Name=C9F07_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06765;partial=true;start_range=.,1 PYKI01000767.1 Protein Homology CDS 1 634 . + 1 ID=cds-TGE09222.1;Parent=gene-C9F07_06765;Dbxref=NCBI_GP:TGE09222.1;Name=TGE09222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457911.1;locus_tag=C9F07_06765;partial=true;product=thiamine phosphate synthase;protein_id=TGE09222.1;start_range=.,1;transl_table=11 PYKI01000767.1 Genbank gene 645 1385 . + . ID=gene-C9F07_06770;Name=C9F07_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06770 PYKI01000767.1 Protein Homology CDS 645 1385 . + 0 ID=cds-TGE09223.1;Parent=gene-C9F07_06770;Dbxref=NCBI_GP:TGE09223.1;Name=TGE09223.1;Note=ATP-dependent adenylate transferase%2C transfers adenyl moiety to the MoeD subunit of molybdopterin synthase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001614949.1;locus_tag=C9F07_06770;product=molybdopterin biosynthesis protein MoeB;protein_id=TGE09223.1;transl_table=11 PYKI01000767.1 Genbank gene 1366 1566 . + . ID=gene-C9F07_06775;Name=C9F07_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06775 PYKI01000767.1 Protein Homology CDS 1366 1566 . + 0 ID=cds-TGE09224.1;Parent=gene-C9F07_06775;Dbxref=NCBI_GP:TGE09224.1;Name=TGE09224.1;Note=with ThiF%2C ThiG%2C and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=C9F07_06775;product=sulfur carrier protein ThiS;protein_id=TGE09224.1;transl_table=11 PYKI01000767.1 Genbank gene 1568 2338 . + . ID=gene-C9F07_06780;Name=C9F07_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06780 PYKI01000767.1 Protein Homology CDS 1568 2338 . + 0 ID=cds-TGE09225.1;Parent=gene-C9F07_06780;Dbxref=NCBI_GP:TGE09225.1;Name=TGE09225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457914.1;locus_tag=C9F07_06780;product=thiazole synthase;protein_id=TGE09225.1;transl_table=11 PYKI01000767.1 Genbank gene 2335 2575 . + . ID=gene-C9F07_06785;Name=C9F07_06785;end_range=2575,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06785;partial=true PYKI01000767.1 Protein Homology CDS 2335 2575 . + 0 ID=cds-TGE09226.1;Parent=gene-C9F07_06785;Dbxref=NCBI_GP:TGE09226.1;Name=TGE09226.1;end_range=2575,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=C9F07_06785;partial=true;product=hypothetical protein;protein_id=TGE09226.1;transl_table=11 ##sequence-region PYKI01003121.1 1 2567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003121.1 Genbank region 1 2567 . + . ID=PYKI01003121.1:1..2567;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003121.1 Genbank gene 1 2555 . + . ID=gene-C9F07_31215;Name=C9F07_31215;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F07_31215;partial=true;start_range=.,1 PYKI01003121.1 Genbank rRNA 1 2555 . + . ID=rna-C9F07_31215;Parent=gene-C9F07_31215;gbkey=rRNA;locus_tag=C9F07_31215;partial=true;product=23S ribosomal RNA;start_range=.,1 PYKI01003121.1 Genbank exon 1 2555 . + . ID=exon-C9F07_31215-1;Parent=rna-C9F07_31215;gbkey=rRNA;locus_tag=C9F07_31215;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region PYKI01002230.1 1 2563 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002230.1 Genbank region 1 2563 . + . ID=PYKI01002230.1:1..2563;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002230.1 Genbank gene 1 924 . + . ID=gene-C9F07_21750;Name=C9F07_21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21750;partial=true;start_range=.,1 PYKI01002230.1 Protein Homology CDS 1 924 . + 0 ID=cds-TGD56198.1;Parent=gene-C9F07_21750;Dbxref=NCBI_GP:TGD56198.1;Name=TGD56198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528704.1;locus_tag=C9F07_21750;partial=true;product=glycosyl transferase;protein_id=TGD56198.1;start_range=.,1;transl_table=11 PYKI01002230.1 Genbank gene 1005 2563 . + . ID=gene-C9F07_21755;Name=C9F07_21755;end_range=2563,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21755;partial=true PYKI01002230.1 Protein Homology CDS 1005 2563 . + 0 ID=cds-TGD56199.1;Parent=gene-C9F07_21755;Dbxref=NCBI_GP:TGD56199.1;Name=TGD56199.1;end_range=2563,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=C9F07_21755;partial=true;product=multidrug ABC transporter ATP-binding protein;protein_id=TGD56199.1;transl_table=11 ##sequence-region PYKI01002274.1 1 2556 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002274.1 Genbank region 1 2556 . + . ID=PYKI01002274.1:1..2556;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002274.1 Genbank gene 1 271 . + . ID=gene-C9F07_22245;Name=C9F07_22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22245;partial=true;start_range=.,1 PYKI01002274.1 Protein Homology CDS 1 271 . + 1 ID=cds-TGD55038.1;Parent=gene-C9F07_22245;Dbxref=NCBI_GP:TGD55038.1;Name=TGD55038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455891.1;locus_tag=C9F07_22245;partial=true;product=benzoate transporter;protein_id=TGD55038.1;start_range=.,1;transl_table=11 PYKI01002274.1 Genbank gene 325 993 . - . ID=gene-C9F07_22250;Name=C9F07_22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22250 PYKI01002274.1 Protein Homology CDS 325 993 . - 0 ID=cds-TGD55039.1;Parent=gene-C9F07_22250;Dbxref=NCBI_GP:TGD55039.1;Name=TGD55039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=C9F07_22250;product=DUF3313 domain-containing protein;protein_id=TGD55039.1;transl_table=11 PYKI01002274.1 Genbank gene 1149 1745 . - . ID=gene-C9F07_22255;Name=C9F07_22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22255 PYKI01002274.1 Protein Homology CDS 1149 1745 . - 0 ID=cds-TGD55040.1;Parent=gene-C9F07_22255;Dbxref=NCBI_GP:TGD55040.1;Name=TGD55040.1;Note=with TehA confers resistance to tellurite;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=C9F07_22255;product=tellurite resistance methyltransferase TehB;protein_id=TGD55040.1;transl_table=11 PYKI01002274.1 Genbank pseudogene 1732 2556 . - . ID=gene-C9F07_22260;Name=C9F07_22260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22260;pseudo=true PYKI01002274.1 Protein Homology CDS 1732 2556 . - 0 ID=cds-C9F07_22260;Parent=gene-C9F07_22260;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=C9F07_22260;product=dicarboxylate transporter/tellurite-resistance protein TehA;pseudo=true;transl_table=11 ##sequence-region PYKI01000544.1 1 2550 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000544.1 Genbank region 1 2550 . + . ID=PYKI01000544.1:1..2550;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000544.1 Genbank gene 1 435 . + . ID=gene-C9F07_04510;Name=C9F07_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04510;partial=true;start_range=.,1 PYKI01000544.1 Protein Homology CDS 1 435 . + 0 ID=cds-TGE15475.1;Parent=gene-C9F07_04510;Dbxref=NCBI_GP:TGE15475.1;Name=TGE15475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456824.1;locus_tag=C9F07_04510;partial=true;product=transcriptional regulator;protein_id=TGE15475.1;start_range=.,1;transl_table=11 PYKI01000544.1 Genbank gene 551 1621 . - . ID=gene-C9F07_04515;Name=C9F07_04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04515 PYKI01000544.1 Protein Homology CDS 551 1621 . - 0 ID=cds-TGE15476.1;Parent=gene-C9F07_04515;Dbxref=NCBI_GP:TGE15476.1;Name=TGE15476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=C9F07_04515;product=glycerophosphodiester phosphodiesterase;protein_id=TGE15476.1;transl_table=11 PYKI01000544.1 Genbank gene 1626 2550 . - . ID=gene-C9F07_04520;Name=glpT;end_range=2550,.;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=C9F07_04520;partial=true PYKI01000544.1 Protein Homology CDS 1626 2550 . - 1 ID=cds-TGE15477.1;Parent=gene-C9F07_04520;Dbxref=NCBI_GP:TGE15477.1;Name=TGE15477.1;Note=catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell;end_range=2550,.;gbkey=CDS;gene=glpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=C9F07_04520;partial=true;product=glycerol-3-phosphate transporter;protein_id=TGE15477.1;transl_table=11 ##sequence-region PYKI01003500.1 1 2545 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003500.1 Genbank region 1 2545 . + . ID=PYKI01003500.1:1..2545;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003500.1 Genbank gene 1 286 . - . ID=gene-C9F07_35225;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=C9F07_35225;partial=true;start_range=.,1 PYKI01003500.1 Protein Homology CDS 1 286 . - 0 ID=cds-TGD32148.1;Parent=gene-C9F07_35225;Dbxref=NCBI_GP:TGD32148.1;Name=TGD32148.1;Note=similar to periplasmic-binding component of ABC transporters;gbkey=CDS;gene=glnH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455365.1;locus_tag=C9F07_35225;partial=true;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=TGD32148.1;start_range=.,1;transl_table=11 PYKI01003500.1 Genbank gene 763 1266 . - . ID=gene-C9F07_35230;Name=C9F07_35230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35230 PYKI01003500.1 Protein Homology CDS 763 1266 . - 0 ID=cds-TGD32149.1;Parent=gene-C9F07_35230;Dbxref=NCBI_GP:TGD32149.1;Name=TGD32149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455366.1;locus_tag=C9F07_35230;product=DNA starvation/stationary phase protection protein Dps;protein_id=TGD32149.1;transl_table=11 PYKI01003500.1 Genbank gene 1569 2456 . - . ID=gene-C9F07_35235;Name=C9F07_35235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35235 PYKI01003500.1 Protein Homology CDS 1569 2456 . - 0 ID=cds-TGD32150.1;Parent=gene-C9F07_35235;Dbxref=NCBI_GP:TGD32150.1;Name=TGD32150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=C9F07_35235;product=threonine/homoserine exporter RhtA;protein_id=TGD32150.1;transl_table=11 ##sequence-region PYKI01002144.1 1 2541 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002144.1 Genbank region 1 2541 . + . ID=PYKI01002144.1:1..2541;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002144.1 Genbank gene 213 668 . + . ID=gene-C9F07_20805;Name=C9F07_20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20805 PYKI01002144.1 Protein Homology CDS 213 668 . + 0 ID=cds-TGD57801.1;Parent=gene-C9F07_20805;Dbxref=NCBI_GP:TGD57801.1;Name=TGD57801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=C9F07_20805;product=DUF4385 domain-containing protein;protein_id=TGD57801.1;transl_table=11 PYKI01002144.1 Genbank gene 772 2073 . + . ID=gene-C9F07_20810;Name=C9F07_20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20810 PYKI01002144.1 Protein Homology CDS 772 2073 . + 0 ID=cds-TGD57802.1;Parent=gene-C9F07_20810;Dbxref=NCBI_GP:TGD57802.1;Name=TGD57802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=C9F07_20810;product=alpha-ketoglutarate transporter;protein_id=TGD57802.1;transl_table=11 PYKI01002144.1 Genbank gene 2070 2393 . - . ID=gene-C9F07_20815;Name=C9F07_20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20815 PYKI01002144.1 Protein Homology CDS 2070 2393 . - 0 ID=cds-TGD57803.1;Parent=gene-C9F07_20815;Dbxref=NCBI_GP:TGD57803.1;Name=TGD57803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457128.1;locus_tag=C9F07_20815;product=hypothetical protein;protein_id=TGD57803.1;transl_table=11 ##sequence-region PYKI01001911.1 1 2540 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001911.1 Genbank region 1 2540 . + . ID=PYKI01001911.1:1..2540;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001911.1 Genbank gene 1 1271 . - . ID=gene-C9F07_18405;Name=C9F07_18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18405;partial=true;start_range=.,1 PYKI01001911.1 Protein Homology CDS 1 1271 . - 0 ID=cds-TGD61265.1;Parent=gene-C9F07_18405;Dbxref=NCBI_GP:TGD61265.1;Name=TGD61265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002412634.1;locus_tag=C9F07_18405;partial=true;product=glucuronide uptake porin UidC;protein_id=TGD61265.1;start_range=.,1;transl_table=11 PYKI01001911.1 Genbank gene 1307 2540 . - . ID=gene-C9F07_18410;Name=C9F07_18410;end_range=2540,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18410;partial=true PYKI01001911.1 Protein Homology CDS 1307 2540 . - 1 ID=cds-TGD61266.1;Parent=gene-C9F07_18410;Dbxref=NCBI_GP:TGD61266.1;Name=TGD61266.1;end_range=2540,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075548.1;locus_tag=C9F07_18410;partial=true;product=MFS transporter;protein_id=TGD61266.1;transl_table=11 ##sequence-region PYKI01002700.1 1 2539 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002700.1 Genbank region 1 2539 . + . ID=PYKI01002700.1:1..2539;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002700.1 Genbank gene 1 364 . - . ID=gene-C9F07_26940;Name=C9F07_26940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26940;partial=true;start_range=.,1 PYKI01002700.1 Protein Homology CDS 1 364 . - 0 ID=cds-TGD48150.1;Parent=gene-C9F07_26940;Dbxref=NCBI_GP:TGD48150.1;Name=TGD48150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000156299.1;locus_tag=C9F07_26940;partial=true;product=baseplate protein;protein_id=TGD48150.1;start_range=.,1;transl_table=11 PYKI01002700.1 Genbank gene 361 735 . - . ID=gene-C9F07_26945;Name=C9F07_26945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26945 PYKI01002700.1 Protein Homology CDS 361 735 . - 0 ID=cds-TGD48151.1;Parent=gene-C9F07_26945;Dbxref=NCBI_GP:TGD48151.1;Name=TGD48151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001557703.1;locus_tag=C9F07_26945;product=hypothetical protein;protein_id=TGD48151.1;transl_table=11 PYKI01002700.1 Genbank gene 741 2539 . - . ID=gene-C9F07_26950;Name=C9F07_26950;end_range=2539,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26950;partial=true PYKI01002700.1 Protein Homology CDS 741 2539 . - 2 ID=cds-TGD48152.1;Parent=gene-C9F07_26950;Dbxref=NCBI_GP:TGD48152.1;Name=TGD48152.1;end_range=2539,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000355353.1;locus_tag=C9F07_26950;partial=true;product=transglycosylase;protein_id=TGD48152.1;transl_table=11 ##sequence-region PYKI01003203.1 1 2539 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003203.1 Genbank region 1 2539 . + . ID=PYKI01003203.1:1..2539;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003203.1 Genbank gene 530 1636 . - . ID=gene-C9F07_32205;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=C9F07_32205 PYKI01003203.1 Protein Homology CDS 530 1636 . - 0 ID=cds-TGD37183.1;Parent=gene-C9F07_32205;Dbxref=NCBI_GP:TGD37183.1;Name=TGD37183.1;gbkey=CDS;gene=asd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121607.1;locus_tag=C9F07_32205;product=aspartate-semialdehyde dehydrogenase;protein_id=TGD37183.1;transl_table=11 PYKI01003203.1 Genbank pseudogene 1763 2137 . + . ID=gene-C9F07_32210;Name=C9F07_32210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32210;pseudo=true PYKI01003203.1 Protein Homology CDS 1763 2137 . + 0 ID=cds-C9F07_32210;Parent=gene-C9F07_32210;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_452851.1;locus_tag=C9F07_32210;product=MarC family protein;pseudo=true;transl_table=11 PYKI01003203.1 Genbank gene 2060 2539 . - . ID=gene-C9F07_32215;Name=C9F07_32215;end_range=2539,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32215;partial=true PYKI01003203.1 Protein Homology CDS 2060 2539 . - 0 ID=cds-TGD37184.1;Parent=gene-C9F07_32215;Dbxref=NCBI_GP:TGD37184.1;Name=TGD37184.1;end_range=2539,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458378.1;locus_tag=C9F07_32215;partial=true;product=gluconate transporter;protein_id=TGD37184.1;transl_table=11 ##sequence-region PYKI01001708.1 1 2536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001708.1 Genbank region 1 2536 . + . ID=PYKI01001708.1:1..2536;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001708.1 Genbank pseudogene 46 180 . - . ID=gene-C9F07_16280;Name=C9F07_16280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16280;pseudo=true PYKI01001708.1 Protein Homology CDS 46 180 . - 0 ID=cds-C9F07_16280;Parent=gene-C9F07_16280;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=C9F07_16280;product=multidrug transporter subunit MdtA;pseudo=true;transl_table=11 PYKI01001708.1 Genbank gene 463 522 . + . ID=gene-C9F07_16285;Name=C9F07_16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16285 PYKI01001708.1 Protein Homology CDS 463 522 . + 0 ID=cds-TGD69374.1;Parent=gene-C9F07_16285;Dbxref=NCBI_GP:TGD69374.1;Name=TGD69374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=C9F07_16285;product=type I toxin-antitoxin system Ibs family toxin;protein_id=TGD69374.1;transl_table=11 PYKI01001708.1 Genbank gene 621 1973 . - . ID=gene-C9F07_16290;Name=C9F07_16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16290 PYKI01001708.1 Protein Homology CDS 621 1973 . - 0 ID=cds-TGD69373.1;Parent=gene-C9F07_16290;Dbxref=NCBI_GP:TGD69373.1;Name=TGD69373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456671.1;locus_tag=C9F07_16290;product=molecular chaperone;protein_id=TGD69373.1;transl_table=11 PYKI01001708.1 Genbank pseudogene 1986 2084 . + . ID=gene-C9F07_16295;Name=C9F07_16295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16295;pseudo=true PYKI01001708.1 Protein Homology CDS 1986 2084 . + 0 ID=cds-C9F07_16295;Parent=gene-C9F07_16295;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001144486.1;locus_tag=C9F07_16295;product=DNA-3-methyladenine glycosidase;pseudo=true;transl_table=11 PYKI01001708.1 Genbank pseudogene 2107 2448 . + . ID=gene-C9F07_16300;Name=C9F07_16300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16300;pseudo=true PYKI01001708.1 Protein Homology CDS 2107 2448 . + 0 ID=cds-C9F07_16300;Parent=gene-C9F07_16300;Note=inducible%2C catalyzes the hydrolysis of alkylated DNA%2C releasing 3-methyladenine%2C 3-methylguanine%2C 7-methylguanine and 7-methyladenine%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=C9F07_16300;product=DNA-3-methyladenine glycosylase 2;pseudo=true;transl_table=11 ##sequence-region PYKI01002000.1 1 2535 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002000.1 Genbank region 1 2535 . + . ID=PYKI01002000.1:1..2535;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002000.1 Genbank pseudogene 105 1331 . + . ID=gene-C9F07_19280;Name=C9F07_19280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19280;pseudo=true PYKI01002000.1 Protein Homology CDS 105 1331 . + 0 ID=cds-C9F07_19280;Parent=gene-C9F07_19280;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=C9F07_19280;product=pilin outer membrane usher protein SafC;pseudo=true;transl_table=11 PYKI01002000.1 Genbank gene 1353 1823 . + . ID=gene-C9F07_19285;Name=C9F07_19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19285 PYKI01002000.1 Protein Homology CDS 1353 1823 . + 0 ID=cds-TGD60151.1;Parent=gene-C9F07_19285;Dbxref=NCBI_GP:TGD60151.1;Name=TGD60151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454908.1;locus_tag=C9F07_19285;product=pilin structural protein SafD;protein_id=TGD60151.1;transl_table=11 PYKI01002000.1 Genbank gene 2233 2535 . + . ID=gene-C9F07_19290;Name=C9F07_19290;end_range=2535,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19290;partial=true PYKI01002000.1 Protein Homology CDS 2233 2535 . + 0 ID=cds-TGD60152.1;Parent=gene-C9F07_19290;Dbxref=NCBI_GP:TGD60152.1;Name=TGD60152.1;end_range=2535,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=C9F07_19290;partial=true;product=carbohydrate transporter;protein_id=TGD60152.1;transl_table=11 ##sequence-region PYKI01002437.1 1 2535 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002437.1 Genbank region 1 2535 . + . ID=PYKI01002437.1:1..2535;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002437.1 Genbank gene 99 182 . + . ID=gene-C9F07_24090;Name=C9F07_24090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24090 PYKI01002437.1 Protein Homology CDS 99 182 . + 0 ID=cds-TGD51160.1;Parent=gene-C9F07_24090;Dbxref=NCBI_GP:TGD51160.1;Name=TGD51160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020230.1;locus_tag=C9F07_24090;product=DUF2474 domain-containing protein;protein_id=TGD51160.1;transl_table=11 PYKI01002437.1 Genbank gene 389 1393 . + . ID=gene-C9F07_24095;Name=C9F07_24095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24095 PYKI01002437.1 Protein Homology CDS 389 1393 . + 0 ID=cds-TGD51158.1;Parent=gene-C9F07_24095;Dbxref=NCBI_GP:TGD51158.1;Name=TGD51158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454958.1;locus_tag=C9F07_24095;product=AraC family transcriptional regulator;protein_id=TGD51158.1;transl_table=11 PYKI01002437.1 Genbank gene 1539 2535 . + . ID=gene-C9F07_24100;Name=foxA;end_range=2535,.;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=C9F07_24100;partial=true PYKI01002437.1 Protein Homology CDS 1539 2535 . + 0 ID=cds-TGD51159.1;Parent=gene-C9F07_24100;Dbxref=NCBI_GP:TGD51159.1;Name=TGD51159.1;end_range=2535,.;gbkey=CDS;gene=foxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=C9F07_24100;partial=true;product=ferrioxamine B receptor FoxA;protein_id=TGD51159.1;transl_table=11 ##sequence-region PYKI01001737.1 1 2528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001737.1 Genbank region 1 2528 . + . ID=PYKI01001737.1:1..2528;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001737.1 Genbank gene 1 634 . - . ID=gene-C9F07_16600;Name=C9F07_16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16600;partial=true;start_range=.,1 PYKI01001737.1 Protein Homology CDS 1 634 . - 0 ID=cds-TGD68490.1;Parent=gene-C9F07_16600;Dbxref=NCBI_GP:TGD68490.1;Name=TGD68490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455849.1;locus_tag=C9F07_16600;partial=true;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=TGD68490.1;start_range=.,1;transl_table=11 PYKI01001737.1 Genbank pseudogene 686 892 . - . ID=gene-C9F07_16605;Name=C9F07_16605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16605;pseudo=true PYKI01001737.1 Protein Homology CDS 686 892 . - 0 ID=cds-C9F07_16605;Parent=gene-C9F07_16605;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=C9F07_16605;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001737.1 Genbank gene 1322 2528 . + . ID=gene-C9F07_16610;Name=C9F07_16610;end_range=2528,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16610;partial=true PYKI01001737.1 Protein Homology CDS 1322 2528 . + 0 ID=cds-TGD68491.1;Parent=gene-C9F07_16610;Dbxref=NCBI_GP:TGD68491.1;Name=TGD68491.1;end_range=2528,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001223407.1;locus_tag=C9F07_16610;partial=true;product=DUF4765 domain-containing protein;protein_id=TGD68491.1;transl_table=11 ##sequence-region PYKI01002887.1 1 5476 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002887.1 Genbank region 1 5476 . + . ID=PYKI01002887.1:1..5476;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002887.1 Genbank gene 47 727 . - . ID=gene-C9F07_28900;Name=C9F07_28900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28900 PYKI01002887.1 Protein Homology CDS 47 727 . - 0 ID=cds-TGD44037.1;Parent=gene-C9F07_28900;Dbxref=NCBI_GP:TGD44037.1;Name=TGD44037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458172.1;locus_tag=C9F07_28900;product=hydrolase;protein_id=TGD44037.1;transl_table=11 PYKI01002887.1 Genbank pseudogene 1330 1573 . + . ID=gene-C9F07_28905;Name=C9F07_28905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28905;pseudo=true PYKI01002887.1 Protein Homology CDS 1330 1573 . + 0 ID=cds-C9F07_28905;Parent=gene-C9F07_28905;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462651.1;locus_tag=C9F07_28905;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002887.1 Genbank pseudogene 1936 2235 . + . ID=gene-C9F07_28910;Name=C9F07_28910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28910;pseudo=true PYKI01002887.1 Protein Homology CDS 1936 2235 . + 0 ID=cds-C9F07_28910;Parent=gene-C9F07_28910;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304062.1;locus_tag=C9F07_28910;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002887.1 Genbank gene 2504 5476 . + . ID=gene-C9F07_28915;Name=C9F07_28915;end_range=5476,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28915;partial=true PYKI01002887.1 Protein Homology CDS 2504 5476 . + 0 ID=cds-TGD44038.1;Parent=gene-C9F07_28915;Dbxref=NCBI_GP:TGD44038.1;Name=TGD44038.1;end_range=5476,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537629.1;locus_tag=C9F07_28915;partial=true;product=invasin;protein_id=TGD44038.1;transl_table=11 ##sequence-region PYKI01001832.1 1 2523 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001832.1 Genbank region 1 2523 . + . ID=PYKI01001832.1:1..2523;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001832.1 Genbank gene 1 159 . - . ID=gene-C9F07_17610;Name=C9F07_17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17610;partial=true;start_range=.,1 PYKI01001832.1 Protein Homology CDS 1 159 . - 0 ID=cds-TGD64274.1;Parent=gene-C9F07_17610;Dbxref=NCBI_GP:TGD64274.1;Name=TGD64274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=C9F07_17610;partial=true;product=hypothetical protein;protein_id=TGD64274.1;start_range=.,1;transl_table=11 PYKI01001832.1 Genbank gene 213 1058 . - . ID=gene-C9F07_17615;Name=C9F07_17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17615 PYKI01001832.1 Protein Homology CDS 213 1058 . - 0 ID=cds-TGD64275.1;Parent=gene-C9F07_17615;Dbxref=NCBI_GP:TGD64275.1;Name=TGD64275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=C9F07_17615;product=fructoselysine 6-kinase;protein_id=TGD64275.1;transl_table=11 PYKI01001832.1 Genbank gene 1122 2099 . - . ID=gene-C9F07_17620;Name=C9F07_17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17620 PYKI01001832.1 Protein Homology CDS 1122 2099 . - 0 ID=cds-TGD64276.1;Parent=gene-C9F07_17620;Dbxref=NCBI_GP:TGD64276.1;Name=TGD64276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=C9F07_17620;product=phosphosugar isomerase;protein_id=TGD64276.1;transl_table=11 PYKI01001832.1 Genbank pseudogene 2275 2454 . - . ID=gene-C9F07_17625;Name=C9F07_17625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17625;pseudo=true PYKI01001832.1 Protein Homology CDS 2275 2454 . - 0 ID=cds-C9F07_17625;Parent=gene-C9F07_17625;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458317.1;locus_tag=C9F07_17625;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01003106.1 1 2522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003106.1 Genbank region 1 2522 . + . ID=PYKI01003106.1:1..2522;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003106.1 Genbank gene 1 979 . + . ID=gene-C9F07_31100;Name=C9F07_31100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31100;partial=true;start_range=.,1 PYKI01003106.1 Protein Homology CDS 1 979 . + 1 ID=cds-TGD39581.1;Parent=gene-C9F07_31100;Dbxref=NCBI_GP:TGD39581.1;Name=TGD39581.1;Note=secreted by salmonella pathogenicity islands 1 and 2%3B involved in survival of Salmonella in host cells%3B interferes with host cell ubiquination pathway;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=C9F07_31100;partial=true;product=E3 ubiquitin--protein ligase;protein_id=TGD39581.1;start_range=.,1;transl_table=11 PYKI01003106.1 Genbank gene 1071 1979 . - . ID=gene-C9F07_31105;Name=C9F07_31105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31105 PYKI01003106.1 Protein Homology CDS 1071 1979 . - 0 ID=cds-TGD39582.1;Parent=gene-C9F07_31105;Dbxref=NCBI_GP:TGD39582.1;Name=TGD39582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=C9F07_31105;product=hypothetical protein;protein_id=TGD39582.1;transl_table=11 PYKI01003106.1 cmsearch riboswitch 2244 2388 . + . ID=id-PYKI01003106.1:2244..2388;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF01055,COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch ##sequence-region PYKI01002775.1 1 2521 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002775.1 Genbank region 1 2521 . + . ID=PYKI01002775.1:1..2521;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002775.1 Genbank pseudogene 1 2365 . + . ID=gene-C9F07_27730;Name=C9F07_27730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27730;pseudo=true PYKI01002775.1 Protein Homology CDS 1 2365 . + 1 ID=cds-C9F07_27730;Parent=gene-C9F07_27730;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=C9F07_27730;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 ##sequence-region PYKI01002408.1 1 2516 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002408.1 Genbank region 1 2516 . + . ID=PYKI01002408.1:1..2516;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002408.1 Genbank gene 1 969 . - . ID=gene-C9F07_23795;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=C9F07_23795;partial=true;start_range=.,1 PYKI01002408.1 Protein Homology CDS 1 969 . - 0 ID=cds-TGD51743.1;Parent=gene-C9F07_23795;Dbxref=NCBI_GP:TGD51743.1;Name=TGD51743.1;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake;gbkey=CDS;gene=actP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132593.1;locus_tag=C9F07_23795;partial=true;product=cation acetate symporter;protein_id=TGD51743.1;start_range=.,1;transl_table=11 PYKI01002408.1 Genbank gene 966 1280 . - . ID=gene-C9F07_23800;Name=C9F07_23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23800 PYKI01002408.1 Protein Homology CDS 966 1280 . - 0 ID=cds-TGD51744.1;Parent=gene-C9F07_23800;Dbxref=NCBI_GP:TGD51744.1;Name=TGD51744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458572.1;locus_tag=C9F07_23800;product=DUF485 domain-containing protein;protein_id=TGD51744.1;transl_table=11 PYKI01002408.1 Genbank gene 1275 1454 . + . ID=gene-C9F07_23805;Name=C9F07_23805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23805 PYKI01002408.1 Protein Homology CDS 1275 1454 . + 0 ID=cds-TGD51745.1;Parent=gene-C9F07_23805;Dbxref=NCBI_GP:TGD51745.1;Name=TGD51745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218551.1;locus_tag=C9F07_23805;product=hypothetical protein;protein_id=TGD51745.1;transl_table=11 PYKI01002408.1 Genbank pseudogene 1520 2488 . - . ID=gene-C9F07_23810;Name=C9F07_23810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23810;pseudo=true PYKI01002408.1 Protein Homology CDS 1520 2488 . - 0 ID=cds-C9F07_23810;Parent=gene-C9F07_23810;Note=Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006816721.1;locus_tag=C9F07_23810;product=acetyl-coenzyme A synthetase;pseudo=true;transl_table=11 ##sequence-region PYKI01000737.1 1 2514 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000737.1 Genbank region 1 2514 . + . ID=PYKI01000737.1:1..2514;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000737.1 Genbank gene 1 714 . + . ID=gene-C9F07_06485;Name=C9F07_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06485;partial=true;start_range=.,1 PYKI01000737.1 Protein Homology CDS 1 714 . + 0 ID=cds-TGE10854.1;Parent=gene-C9F07_06485;Dbxref=NCBI_GP:TGE10854.1;Name=TGE10854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=C9F07_06485;partial=true;product=DNA gyrase subunit A;protein_id=TGE10854.1;start_range=.,1;transl_table=11 PYKI01000737.1 Genbank gene 832 2514 . + . ID=gene-C9F07_06490;Name=C9F07_06490;end_range=2514,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06490;partial=true PYKI01000737.1 Protein Homology CDS 832 2514 . + 0 ID=cds-TGE10855.1;Parent=gene-C9F07_06490;Dbxref=NCBI_GP:TGE10855.1;Name=TGE10855.1;end_range=2514,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456815.1;locus_tag=C9F07_06490;partial=true;product=two-component system sensor histidine kinase RcsC;protein_id=TGE10855.1;transl_table=11 ##sequence-region PYKI01002573.1 1 2513 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002573.1 Genbank region 1 2513 . + . ID=PYKI01002573.1:1..2513;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002573.1 Genbank gene 191 1495 . - . ID=gene-C9F07_25545;Name=C9F07_25545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25545 PYKI01002573.1 Protein Homology CDS 191 1495 . - 0 ID=cds-TGD49778.1;Parent=gene-C9F07_25545;Dbxref=NCBI_GP:TGD49778.1;Name=TGD49778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001272652.1;locus_tag=C9F07_25545;product=phage tail protein;protein_id=TGD49778.1;transl_table=11 PYKI01002573.1 Genbank gene 1506 2465 . - . ID=gene-C9F07_25550;Name=C9F07_25550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25550 PYKI01002573.1 Protein Homology CDS 1506 2465 . - 0 ID=cds-TGD49779.1;Parent=gene-C9F07_25550;Dbxref=NCBI_GP:TGD49779.1;Name=TGD49779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835813.1;locus_tag=C9F07_25550;product=hypothetical protein;protein_id=TGD49779.1;transl_table=11 ##sequence-region PYKI01002576.1 1 2513 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002576.1 Genbank region 1 2513 . + . ID=PYKI01002576.1:1..2513;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002576.1 Genbank pseudogene 37 843 . + . ID=gene-C9F07_25580;Name=C9F07_25580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25580;pseudo=true PYKI01002576.1 Protein Homology CDS 37 843 . + 0 ID=cds-C9F07_25580;Parent=gene-C9F07_25580;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=C9F07_25580;product=protease;pseudo=true;transl_table=11 PYKI01002576.1 Genbank gene 834 1730 . + . ID=gene-C9F07_25585;Name=C9F07_25585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25585 PYKI01002576.1 Protein Homology CDS 834 1730 . + 0 ID=cds-TGD49757.1;Parent=gene-C9F07_25585;Dbxref=NCBI_GP:TGD49757.1;Name=TGD49757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462188.3;locus_tag=C9F07_25585;product=U32 family peptidase;protein_id=TGD49757.1;transl_table=11 PYKI01002576.1 Genbank gene 1907 2513 . + . ID=gene-C9F07_25590;Name=C9F07_25590;end_range=2513,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25590;partial=true PYKI01002576.1 Protein Homology CDS 1907 2513 . + 0 ID=cds-TGD49758.1;Parent=gene-C9F07_25590;Dbxref=NCBI_GP:TGD49758.1;Name=TGD49758.1;end_range=2513,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131802.1;locus_tag=C9F07_25590;partial=true;product=LLM class flavin-dependent oxidoreductase;protein_id=TGD49758.1;transl_table=11 ##sequence-region PYKI01001219.1 1 2512 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001219.1 Genbank region 1 2512 . + . ID=PYKI01001219.1:1..2512;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001219.1 Genbank gene 1 1425 . - . ID=gene-C9F07_11405;Name=C9F07_11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11405;partial=true;start_range=.,1 PYKI01001219.1 Protein Homology CDS 1 1425 . - 0 ID=cds-TGD91219.1;Parent=gene-C9F07_11405;Dbxref=NCBI_GP:TGD91219.1;Name=TGD91219.1;Note=involved in invasion of epithelial cells;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=C9F07_11405;partial=true;product=intimin-like inverse autotransporter protein SinH;protein_id=TGD91219.1;start_range=.,1;transl_table=11 PYKI01001219.1 Genbank gene 1772 1993 . - . ID=gene-C9F07_11410;Name=C9F07_11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11410 PYKI01001219.1 Protein Homology CDS 1772 1993 . - 0 ID=cds-TGD91220.1;Parent=gene-C9F07_11410;Dbxref=NCBI_GP:TGD91220.1;Name=TGD91220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=C9F07_11410;product=hypothetical protein;protein_id=TGD91220.1;transl_table=11 PYKI01001219.1 Genbank gene 2082 2512 . - . ID=gene-C9F07_11415;Name=C9F07_11415;end_range=2512,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11415;partial=true PYKI01001219.1 Protein Homology CDS 2082 2512 . - 2 ID=cds-TGD91221.1;Parent=gene-C9F07_11415;Dbxref=NCBI_GP:TGD91221.1;Name=TGD91221.1;end_range=2512,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=C9F07_11415;partial=true;product=ribosome biogenesis GTPase Der;protein_id=TGD91221.1;transl_table=11 ##sequence-region PYKI01002037.1 1 2499 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002037.1 Genbank region 1 2499 . + . ID=PYKI01002037.1:1..2499;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002037.1 Genbank gene 1 116 . - . ID=gene-C9F07_19690;Name=C9F07_19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19690;partial=true;start_range=.,1 PYKI01002037.1 Protein Homology CDS 1 116 . - 0 ID=cds-TGD60005.1;Parent=gene-C9F07_19690;Dbxref=NCBI_GP:TGD60005.1;Name=TGD60005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785930.1;locus_tag=C9F07_19690;partial=true;product=D-arabinose 5-phosphate isomerase;protein_id=TGD60005.1;start_range=.,1;transl_table=11 PYKI01002037.1 Genbank gene 109 1086 . - . ID=gene-C9F07_19695;Name=C9F07_19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19695 PYKI01002037.1 Protein Homology CDS 109 1086 . - 0 ID=cds-TGD60002.1;Parent=gene-C9F07_19695;Dbxref=NCBI_GP:TGD60002.1;Name=TGD60002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457693.1;locus_tag=C9F07_19695;product=calcium/sodium antiporter;protein_id=TGD60002.1;transl_table=11 PYKI01002037.1 Genbank gene 1299 2111 . + . ID=gene-C9F07_19700;Name=C9F07_19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19700 PYKI01002037.1 Protein Homology CDS 1299 2111 . + 0 ID=cds-TGD60003.1;Parent=gene-C9F07_19700;Dbxref=NCBI_GP:TGD60003.1;Name=TGD60003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=C9F07_19700;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=TGD60003.1;transl_table=11 PYKI01002037.1 Genbank gene 2119 2499 . + . ID=gene-C9F07_19705;Name=C9F07_19705;end_range=2499,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19705;partial=true PYKI01002037.1 Protein Homology CDS 2119 2499 . + 0 ID=cds-TGD60004.1;Parent=gene-C9F07_19705;Dbxref=NCBI_GP:TGD60004.1;Name=TGD60004.1;end_range=2499,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=C9F07_19705;partial=true;product=ABC transporter permease;protein_id=TGD60004.1;transl_table=11 ##sequence-region PYKI01003201.1 1 5450 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003201.1 Genbank region 1 5450 . + . ID=PYKI01003201.1:1..5450;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003201.1 Genbank gene 1 591 . - . ID=gene-C9F07_32160;Name=dipZ;gbkey=Gene;gene=dipZ;gene_biotype=protein_coding;locus_tag=C9F07_32160;partial=true;start_range=.,1 PYKI01003201.1 Protein Homology CDS 1 591 . - 0 ID=cds-TGD37290.1;Parent=gene-C9F07_32160;Dbxref=NCBI_GP:TGD37290.1;Name=TGD37290.1;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm;gbkey=CDS;gene=dipZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458761.1;locus_tag=C9F07_32160;partial=true;product=protein-disulfide reductase DsbD;protein_id=TGD37290.1;start_range=.,1;transl_table=11 PYKI01003201.1 Genbank gene 567 914 . - . ID=gene-C9F07_32165;Name=C9F07_32165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32165 PYKI01003201.1 Protein Homology CDS 567 914 . - 0 ID=cds-TGD37291.1;Parent=gene-C9F07_32165;Dbxref=NCBI_GP:TGD37291.1;Name=TGD37291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458762.1;locus_tag=C9F07_32165;product=divalent-cation tolerance protein CutA;protein_id=TGD37291.1;transl_table=11 PYKI01003201.1 Genbank pseudogene 1035 2336 . - . ID=gene-C9F07_32170;Name=C9F07_32170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32170;pseudo=true PYKI01003201.1 Protein Homology CDS 1035 2336 . - 0 ID=cds-C9F07_32170;Parent=gene-C9F07_32170;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=C9F07_32170;product=C4-dicarboxylate transporter;pseudo=true;transl_table=11 PYKI01003201.1 Genbank gene 2502 3887 . - . ID=gene-C9F07_32175;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=C9F07_32175 PYKI01003201.1 Protein Homology CDS 2502 3887 . - 0 ID=cds-TGD37292.1;Parent=gene-C9F07_32175;Dbxref=NCBI_GP:TGD37292.1;Name=TGD37292.1;gbkey=CDS;gene=aspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178931.1;locus_tag=C9F07_32175;product=aspartate ammonia-lyase;protein_id=TGD37292.1;transl_table=11 PYKI01003201.1 Genbank gene 4189 4704 . + . ID=gene-C9F07_32180;Name=C9F07_32180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32180 PYKI01003201.1 Protein Homology CDS 4189 4704 . + 0 ID=cds-TGD37293.1;Parent=gene-C9F07_32180;Dbxref=NCBI_GP:TGD37293.1;Name=TGD37293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463191.3;locus_tag=C9F07_32180;product=membrane protein FxsA;protein_id=TGD37293.1;transl_table=11 PYKI01003201.1 Genbank gene 4763 5450 . - . ID=gene-C9F07_32185;Name=C9F07_32185;end_range=5450,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32185;partial=true PYKI01003201.1 Protein Homology CDS 4763 5450 . - 1 ID=cds-TGD37294.1;Parent=gene-C9F07_32185;Dbxref=NCBI_GP:TGD37294.1;Name=TGD37294.1;end_range=5450,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458767.1;locus_tag=C9F07_32185;partial=true;product=L-methionine/branched-chain amino acid transporter;protein_id=TGD37294.1;transl_table=11 ##sequence-region PYKI01002649.1 1 2498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002649.1 Genbank region 1 2498 . + . ID=PYKI01002649.1:1..2498;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002649.1 Genbank gene 1 301 . + . ID=gene-C9F07_26375;Name=C9F07_26375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26375;partial=true;start_range=.,1 PYKI01002649.1 Protein Homology CDS 1 301 . + 1 ID=cds-TGD49371.1;Parent=gene-C9F07_26375;Dbxref=NCBI_GP:TGD49371.1;Name=TGD49371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=C9F07_26375;partial=true;product=iron ABC transporter ATP-binding protein FetA;protein_id=TGD49371.1;start_range=.,1;transl_table=11 PYKI01002649.1 Genbank gene 288 1067 . + . ID=gene-C9F07_26380;Name=C9F07_26380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26380 PYKI01002649.1 Protein Homology CDS 288 1067 . + 0 ID=cds-TGD49372.1;Parent=gene-C9F07_26380;Dbxref=NCBI_GP:TGD49372.1;Name=TGD49372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455098.1;locus_tag=C9F07_26380;product=iron export ABC transporter permease subunit FetB;protein_id=TGD49372.1;transl_table=11 PYKI01002649.1 Genbank pseudogene 1153 2007 . - . ID=gene-C9F07_26385;Name=C9F07_26385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26385;pseudo=true PYKI01002649.1 Protein Homology CDS 1153 2007 . - 0 ID=cds-C9F07_26385;Parent=gene-C9F07_26385;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455099.1;locus_tag=C9F07_26385;product=co-chaperone YbbN;pseudo=true;transl_table=11 PYKI01002649.1 Genbank gene 2067 2498 . - . ID=gene-C9F07_26390;Name=C9F07_26390;end_range=2498,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26390;partial=true PYKI01002649.1 Protein Homology CDS 2067 2498 . - 0 ID=cds-TGD49373.1;Parent=gene-C9F07_26390;Dbxref=NCBI_GP:TGD49373.1;Name=TGD49373.1;end_range=2498,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455100.1;locus_tag=C9F07_26390;partial=true;product=short-chain dehydrogenase;protein_id=TGD49373.1;transl_table=11 ##sequence-region PYKI01000473.1 1 2497 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000473.1 Genbank region 1 2497 . + . ID=PYKI01000473.1:1..2497;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000473.1 Genbank pseudogene 1 2148 . - . ID=gene-C9F07_03760;Name=treY;gbkey=Gene;gene=treY;gene_biotype=pseudogene;locus_tag=C9F07_03760;pseudo=true PYKI01000473.1 Protein Homology CDS 1 2148 . - 0 ID=cds-C9F07_03760;Parent=gene-C9F07_03760;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;gene=treY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=C9F07_03760;product=malto-oligosyltrehalose synthase;pseudo=true;transl_table=11 PYKI01000473.1 Genbank gene 2145 2497 . - . ID=gene-C9F07_03765;Name=C9F07_03765;end_range=2497,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03765;partial=true PYKI01000473.1 Protein Homology CDS 2145 2497 . - 2 ID=cds-TGE19600.1;Parent=gene-C9F07_03765;Dbxref=NCBI_GP:TGE19600.1;Name=TGE19600.1;end_range=2497,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455932.1;locus_tag=C9F07_03765;partial=true;product=hypothetical protein;protein_id=TGE19600.1;transl_table=11 ##sequence-region PYKI01002339.1 1 2493 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002339.1 Genbank region 1 2493 . + . ID=PYKI01002339.1:1..2493;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002339.1 Genbank gene 26 460 . + . ID=gene-C9F07_22945;Name=C9F07_22945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22945 PYKI01002339.1 Protein Homology CDS 26 460 . + 0 ID=cds-TGD53618.1;Parent=gene-C9F07_22945;Dbxref=NCBI_GP:TGD53618.1;Name=TGD53618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001785240.1;locus_tag=C9F07_22945;product=GTP pyrophosphokinase;protein_id=TGD53618.1;transl_table=11 PYKI01002339.1 Genbank gene 531 887 . + . ID=gene-C9F07_22950;Name=C9F07_22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22950 PYKI01002339.1 Protein Homology CDS 531 887 . + 0 ID=cds-TGD53616.1;Parent=gene-C9F07_22950;Dbxref=NCBI_GP:TGD53616.1;Name=TGD53616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461876.3;locus_tag=C9F07_22950;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=TGD53616.1;transl_table=11 PYKI01002339.1 Genbank gene 853 1149 . + . ID=gene-C9F07_22955;Name=C9F07_22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22955 PYKI01002339.1 Protein Homology CDS 853 1149 . + 0 ID=cds-TGD53617.1;Parent=gene-C9F07_22955;Dbxref=NCBI_GP:TGD53617.1;Name=TGD53617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001261203.1;locus_tag=C9F07_22955;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=TGD53617.1;transl_table=11 PYKI01002339.1 Genbank pseudogene 1168 1311 . - . ID=gene-C9F07_22960;Name=C9F07_22960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22960;pseudo=true PYKI01002339.1 Protein Homology CDS 1168 1311 . - 0 ID=cds-C9F07_22960;Parent=gene-C9F07_22960;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=C9F07_22960;product=fimbrial protein SteA;pseudo=true;transl_table=11 PYKI01002339.1 Genbank gene 1917 2493 . + . ID=gene-C9F07_22965;Name=C9F07_22965;end_range=2493,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22965;partial=true PYKI01002339.1 Protein Homology CDS 1917 2493 . + 0 ID=cds-TGD53619.1;Parent=gene-C9F07_22965;Dbxref=NCBI_GP:TGD53619.1;Name=TGD53619.1;end_range=2493,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457343.1;locus_tag=C9F07_22965;partial=true;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=TGD53619.1;transl_table=11 ##sequence-region PYKI01003208.1 1 2493 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003208.1 Genbank region 1 2493 . + . ID=PYKI01003208.1:1..2493;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003208.1 Genbank gene 66 218 . + . ID=gene-C9F07_32260;Name=C9F07_32260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32260 PYKI01003208.1 Protein Homology CDS 66 218 . + 0 ID=cds-TGD37092.1;Parent=gene-C9F07_32260;Dbxref=NCBI_GP:TGD37092.1;Name=TGD37092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007704314.1;locus_tag=C9F07_32260;product=peptidyl-prolyl cis-trans isomerase;protein_id=TGD37092.1;transl_table=11 PYKI01003208.1 Genbank gene 312 1787 . - . ID=gene-C9F07_32265;Name=C9F07_32265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32265 PYKI01003208.1 Protein Homology CDS 312 1787 . - 0 ID=cds-TGD37091.1;Parent=gene-C9F07_32265;Dbxref=NCBI_GP:TGD37091.1;Name=TGD37091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457839.1;locus_tag=C9F07_32265;product=ketol-acid reductoisomerase;protein_id=TGD37091.1;transl_table=11 PYKI01003208.1 Genbank gene 1952 2493 . + . ID=gene-C9F07_32270;Name=C9F07_32270;end_range=2493,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32270;partial=true PYKI01003208.1 Protein Homology CDS 1952 2493 . + 0 ID=cds-TGD37093.1;Parent=gene-C9F07_32270;Dbxref=NCBI_GP:TGD37093.1;Name=TGD37093.1;end_range=2493,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457840.1;locus_tag=C9F07_32270;partial=true;product=HTH-type transcriptional activator IlvY;protein_id=TGD37093.1;transl_table=11 ##sequence-region PYKI01003308.1 1 2490 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003308.1 Genbank region 1 2490 . + . ID=PYKI01003308.1:1..2490;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003308.1 Genbank pseudogene 73 609 . - . ID=gene-C9F07_33270;Name=C9F07_33270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33270;pseudo=true PYKI01003308.1 Protein Homology CDS 73 609 . - 0 ID=cds-C9F07_33270;Parent=gene-C9F07_33270;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456451.1;locus_tag=C9F07_33270;product=phosphoribosylglycinamide formyltransferase 2;pseudo=true;transl_table=11 PYKI01003308.1 Genbank gene 740 1030 . + . ID=gene-C9F07_33275;Name=C9F07_33275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33275 PYKI01003308.1 Protein Homology CDS 740 1030 . + 0 ID=cds-TGD36015.1;Parent=gene-C9F07_33275;Dbxref=NCBI_GP:TGD36015.1;Name=TGD36015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=C9F07_33275;product=damage-inducible protein YebG;protein_id=TGD36015.1;transl_table=11 PYKI01003308.1 Genbank gene 1098 1451 . + . ID=gene-C9F07_33280;Name=C9F07_33280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33280 PYKI01003308.1 Protein Homology CDS 1098 1451 . + 0 ID=cds-TGD36016.1;Parent=gene-C9F07_33280;Dbxref=NCBI_GP:TGD36016.1;Name=TGD36016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456449.1;locus_tag=C9F07_33280;product=hypothetical protein;protein_id=TGD36016.1;transl_table=11 PYKI01003308.1 Genbank gene 1545 2204 . + . ID=gene-C9F07_33285;Name=C9F07_33285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33285 PYKI01003308.1 Protein Homology CDS 1545 2204 . + 0 ID=cds-TGD36017.1;Parent=gene-C9F07_33285;Dbxref=NCBI_GP:TGD36017.1;Name=TGD36017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=C9F07_33285;product=DUF533 domain-containing protein;protein_id=TGD36017.1;transl_table=11 ##sequence-region PYKI01001659.1 1 2487 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001659.1 Genbank region 1 2487 . + . ID=PYKI01001659.1:1..2487;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001659.1 Genbank gene 1 1053 . + . ID=gene-C9F07_15830;Name=C9F07_15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15830;partial=true;start_range=.,1 PYKI01001659.1 Protein Homology CDS 1 1053 . + 0 ID=cds-TGD70180.1;Parent=gene-C9F07_15830;Dbxref=NCBI_GP:TGD70180.1;Name=TGD70180.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455432.1;locus_tag=C9F07_15830;partial=true;product=macrolide ABC transporter permease/ATP-binding protein MacB;protein_id=TGD70180.1;start_range=.,1;transl_table=11 PYKI01001659.1 Genbank gene 1183 1404 . - . ID=gene-C9F07_15835;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=C9F07_15835 PYKI01001659.1 Protein Homology CDS 1183 1404 . - 0 ID=cds-TGD70181.1;Parent=gene-C9F07_15835;Dbxref=NCBI_GP:TGD70181.1;Name=TGD70181.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455433.1;locus_tag=C9F07_15835;product=cold shock domain protein CspD;protein_id=TGD70181.1;transl_table=11 PYKI01001659.1 Genbank gene 1728 2048 . + . ID=gene-C9F07_15840;Name=C9F07_15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15840 PYKI01001659.1 Protein Homology CDS 1728 2048 . + 0 ID=cds-TGD70182.1;Parent=gene-C9F07_15840;Dbxref=NCBI_GP:TGD70182.1;Name=TGD70182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=C9F07_15840;product=ATP-dependent Clp protease adaptor ClpS;protein_id=TGD70182.1;transl_table=11 PYKI01001659.1 Genbank pseudogene 2079 2465 . + . ID=gene-C9F07_15845;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=pseudogene;locus_tag=C9F07_15845;pseudo=true PYKI01001659.1 Protein Homology CDS 2079 2465 . + 0 ID=cds-C9F07_15845;Parent=gene-C9F07_15845;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=clpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455435.1;locus_tag=C9F07_15845;product=ATP-dependent Clp protease ATP-binding subunit ClpA;pseudo=true;transl_table=11 ##sequence-region PYKI01002087.1 1 2486 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002087.1 Genbank region 1 2486 . + . ID=PYKI01002087.1:1..2486;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002087.1 Genbank gene 1 302 . + . ID=gene-C9F07_20235;Name=C9F07_20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20235;partial=true;start_range=.,1 PYKI01002087.1 Protein Homology CDS 1 302 . + 2 ID=cds-TGD58820.1;Parent=gene-C9F07_20235;Dbxref=NCBI_GP:TGD58820.1;Name=TGD58820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458414.1;locus_tag=C9F07_20235;partial=true;product=hypothetical protein;protein_id=TGD58820.1;start_range=.,1;transl_table=11 PYKI01002087.1 Genbank gene 292 693 . + . ID=gene-C9F07_20240;Name=C9F07_20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20240 PYKI01002087.1 Protein Homology CDS 292 693 . + 0 ID=cds-TGD58821.1;Parent=gene-C9F07_20240;Dbxref=NCBI_GP:TGD58821.1;Name=TGD58821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458415.1;locus_tag=C9F07_20240;product=DUF2531 domain-containing protein;protein_id=TGD58821.1;transl_table=11 PYKI01002087.1 Genbank gene 608 1846 . + . ID=gene-C9F07_20245;Name=C9F07_20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20245 PYKI01002087.1 Protein Homology CDS 608 1846 . + 0 ID=cds-TGD58822.1;Parent=gene-C9F07_20245;Dbxref=NCBI_GP:TGD58822.1;Name=TGD58822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458416.1;locus_tag=C9F07_20245;product=DNA transporter HofQ;protein_id=TGD58822.1;transl_table=11 PYKI01002087.1 Genbank gene 1912 2124 . - . ID=gene-C9F07_20250;Name=C9F07_20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20250 PYKI01002087.1 Protein Homology CDS 1912 2124 . - 0 ID=cds-TGD58825.1;Parent=gene-C9F07_20250;Dbxref=NCBI_GP:TGD58825.1;Name=TGD58825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751151.1;locus_tag=C9F07_20250;product=hypothetical protein;protein_id=TGD58825.1;transl_table=11 PYKI01002087.1 Genbank gene 2102 2284 . + . ID=gene-C9F07_20255;Name=C9F07_20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20255 PYKI01002087.1 Protein Homology CDS 2102 2284 . + 0 ID=cds-TGD58824.1;Parent=gene-C9F07_20255;Dbxref=NCBI_GP:TGD58824.1;Name=TGD58824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751150.1;locus_tag=C9F07_20255;product=hypothetical protein;protein_id=TGD58824.1;transl_table=11 PYKI01002087.1 Genbank gene 2311 2486 . + . ID=gene-C9F07_20260;Name=aroK;end_range=2486,.;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=C9F07_20260;partial=true PYKI01002087.1 Protein Homology CDS 2311 2486 . + 0 ID=cds-TGD58823.1;Parent=gene-C9F07_20260;Dbxref=NCBI_GP:TGD58823.1;Name=TGD58823.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;end_range=2486,.;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458417.1;locus_tag=C9F07_20260;partial=true;product=shikimate kinase I;protein_id=TGD58823.1;transl_table=11 ##sequence-region PYKI01002359.1 1 2485 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002359.1 Genbank region 1 2485 . + . ID=PYKI01002359.1:1..2485;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002359.1 Genbank gene 1 318 . - . ID=gene-C9F07_23195;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=C9F07_23195;partial=true;start_range=.,1 PYKI01002359.1 Protein Homology CDS 1 318 . - 0 ID=cds-TGD53048.1;Parent=gene-C9F07_23195;Dbxref=NCBI_GP:TGD53048.1;Name=TGD53048.1;Note=Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates;gbkey=CDS;gene=sbcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456614.1;locus_tag=C9F07_23195;partial=true;product=exodeoxyribonuclease I;protein_id=TGD53048.1;start_range=.,1;transl_table=11 PYKI01002359.1 Genbank gene 661 2485 . - . ID=gene-C9F07_23200;Name=C9F07_23200;end_range=2485,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23200;partial=true PYKI01002359.1 Protein Homology CDS 661 2485 . - 1 ID=cds-TGD53049.1;Parent=gene-C9F07_23200;Dbxref=NCBI_GP:TGD53049.1;Name=TGD53049.1;end_range=2485,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=C9F07_23200;partial=true;product=type III secretion system effector HECT-type E3 ubiquitin transferase;protein_id=TGD53049.1;transl_table=11 ##sequence-region PYKI01002145.1 1 2483 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002145.1 Genbank region 1 2483 . + . ID=PYKI01002145.1:1..2483;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002145.1 Genbank gene 1 479 . + . ID=gene-C9F07_20820;Name=C9F07_20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20820;partial=true;start_range=.,1 PYKI01002145.1 Protein Homology CDS 1 479 . + 2 ID=cds-TGD57477.1;Parent=gene-C9F07_20820;Dbxref=NCBI_GP:TGD57477.1;Name=TGD57477.1;Note=c-di-GMP phosphodiesterase%3B probably degrades signalling molecule c-di-GMP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=C9F07_20820;partial=true;product=cyclic di-GMP phosphodiesterase;protein_id=TGD57477.1;start_range=.,1;transl_table=11 PYKI01002145.1 Genbank gene 601 780 . + . ID=gene-C9F07_20825;Name=C9F07_20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20825 PYKI01002145.1 Protein Homology CDS 601 780 . + 0 ID=cds-TGD57478.1;Parent=gene-C9F07_20825;Dbxref=NCBI_GP:TGD57478.1;Name=TGD57478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=C9F07_20825;product=hypothetical protein;protein_id=TGD57478.1;transl_table=11 PYKI01002145.1 Genbank gene 867 1619 . + . ID=gene-C9F07_20830;Name=C9F07_20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20830 PYKI01002145.1 Protein Homology CDS 867 1619 . + 0 ID=cds-TGD57479.1;Parent=gene-C9F07_20830;Dbxref=NCBI_GP:TGD57479.1;Name=TGD57479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455793.1;locus_tag=C9F07_20830;product=DeoR/GlpR transcriptional regulator;protein_id=TGD57479.1;transl_table=11 PYKI01002145.1 Genbank gene 1878 2096 . + . ID=gene-C9F07_20835;Name=C9F07_20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20835 PYKI01002145.1 Protein Homology CDS 1878 2096 . + 0 ID=cds-TGD57480.1;Parent=gene-C9F07_20835;Dbxref=NCBI_GP:TGD57480.1;Name=TGD57480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=C9F07_20835;product=osmotically-inducible lipoprotein B;protein_id=TGD57480.1;transl_table=11 PYKI01002145.1 Genbank gene 2216 2483 . - . ID=gene-C9F07_20840;Name=C9F07_20840;end_range=2483,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20840;partial=true PYKI01002145.1 Protein Homology CDS 2216 2483 . - 1 ID=cds-TGD57481.1;Parent=gene-C9F07_20840;Dbxref=NCBI_GP:TGD57481.1;Name=TGD57481.1;end_range=2483,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455791.1;locus_tag=C9F07_20840;partial=true;product=stress response translation initiation inhibitor YciH;protein_id=TGD57481.1;transl_table=11 ##sequence-region PYKI01000442.1 1 5407 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000442.1 Genbank region 1 5407 . + . ID=PYKI01000442.1:1..5407;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000442.1 Genbank pseudogene 668 1003 . - . ID=gene-C9F07_03400;Name=C9F07_03400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03400;pseudo=true PYKI01000442.1 Protein Homology CDS 668 1003 . - 0 ID=cds-C9F07_03400;Parent=gene-C9F07_03400;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406331.1;locus_tag=C9F07_03400;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000442.1 Genbank gene 1178 2230 . - . ID=gene-C9F07_03405;Name=C9F07_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03405 PYKI01000442.1 Protein Homology CDS 1178 2230 . - 0 ID=cds-TGE20817.1;Parent=gene-C9F07_03405;Dbxref=NCBI_GP:TGE20817.1;Name=TGE20817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457179.1;locus_tag=C9F07_03405;product=type III secretion system effector PipB2;protein_id=TGE20817.1;transl_table=11 PYKI01000442.1 Genbank gene 2747 3676 . + . ID=gene-C9F07_03410;Name=C9F07_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03410 PYKI01000442.1 Protein Homology CDS 2747 3676 . + 0 ID=cds-TGE20818.1;Parent=gene-C9F07_03410;Dbxref=NCBI_GP:TGE20818.1;Name=TGE20818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457180.1;locus_tag=C9F07_03410;product=DUF535 domain-containing protein;protein_id=TGE20818.1;transl_table=11 PYKI01000442.1 Genbank gene 3776 3973 . + . ID=gene-C9F07_03415;Name=C9F07_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03415 PYKI01000442.1 Protein Homology CDS 3776 3973 . + 0 ID=cds-TGE20819.1;Parent=gene-C9F07_03415;Dbxref=NCBI_GP:TGE20819.1;Name=TGE20819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574832.1;locus_tag=C9F07_03415;product=hypothetical protein;protein_id=TGE20819.1;transl_table=11 PYKI01000442.1 Genbank gene 3970 4866 . + . ID=gene-C9F07_03420;Name=C9F07_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03420 PYKI01000442.1 Protein Homology CDS 3970 4866 . + 0 ID=cds-TGE20820.1;Parent=gene-C9F07_03420;Dbxref=NCBI_GP:TGE20820.1;Name=TGE20820.1;Note=induced within macrophages%3B necessary for the resistance to antimicrobials;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457181.1;locus_tag=C9F07_03420;product=antimicrobial resistance protein Mig-14;protein_id=TGE20820.1;transl_table=11 ##sequence-region PYKI01002815.1 1 2473 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002815.1 Genbank region 1 2473 . + . ID=PYKI01002815.1:1..2473;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002815.1 Genbank gene 245 1012 . - . ID=gene-C9F07_28185;Name=C9F07_28185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28185 PYKI01002815.1 Protein Homology CDS 245 1012 . - 0 ID=cds-TGD45704.1;Parent=gene-C9F07_28185;Dbxref=NCBI_GP:TGD45704.1;Name=TGD45704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=C9F07_28185;product=amidohydrolase;protein_id=TGD45704.1;transl_table=11 PYKI01002815.1 Genbank pseudogene 1121 2473 . - . ID=gene-C9F07_28190;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=pseudogene;locus_tag=C9F07_28190;pseudo=true PYKI01002815.1 Protein Homology CDS 1121 2473 . - 0 ID=cds-C9F07_28190;Parent=gene-C9F07_28190;Note=functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=fadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=C9F07_28190;product=acyl-CoA dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01003178.1 1 2473 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003178.1 Genbank region 1 2473 . + . ID=PYKI01003178.1:1..2473;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003178.1 Genbank gene 1 164 . + . ID=gene-C9F07_31870;Name=C9F07_31870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31870;partial=true;start_range=.,1 PYKI01003178.1 Protein Homology CDS 1 164 . + 2 ID=cds-TGD37809.1;Parent=gene-C9F07_31870;Dbxref=NCBI_GP:TGD37809.1;Name=TGD37809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455257.1;locus_tag=C9F07_31870;partial=true;product=esterase;protein_id=TGD37809.1;start_range=.,1;transl_table=11 PYKI01003178.1 Genbank gene 298 591 . + . ID=gene-C9F07_31875;Name=C9F07_31875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31875 PYKI01003178.1 Protein Homology CDS 298 591 . + 0 ID=cds-TGD37810.1;Parent=gene-C9F07_31875;Dbxref=NCBI_GP:TGD37810.1;Name=TGD37810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455256.1;locus_tag=C9F07_31875;product=LexA regulated protein;protein_id=TGD37810.1;transl_table=11 PYKI01003178.1 Genbank gene 742 1272 . + . ID=gene-C9F07_31880;Name=C9F07_31880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31880 PYKI01003178.1 Protein Homology CDS 742 1272 . + 0 ID=cds-TGD37811.1;Parent=gene-C9F07_31880;Dbxref=NCBI_GP:TGD37811.1;Name=TGD37811.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=C9F07_31880;product=flavodoxin-1;protein_id=TGD37811.1;transl_table=11 PYKI01003178.1 Genbank gene 1554 2006 . + . ID=gene-C9F07_31885;Name=C9F07_31885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31885 PYKI01003178.1 Protein Homology CDS 1554 2006 . + 0 ID=cds-TGD37812.1;Parent=gene-C9F07_31885;Dbxref=NCBI_GP:TGD37812.1;Name=TGD37812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455254.1;locus_tag=C9F07_31885;product=ferric iron uptake transcriptional regulator;protein_id=TGD37812.1;transl_table=11 PYKI01003178.1 Genbank pseudogene 2120 2413 . + . ID=gene-C9F07_31890;Name=C9F07_31890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31890;pseudo=true PYKI01003178.1 Protein Homology CDS 2120 2413 . + 0 ID=cds-C9F07_31890;Parent=gene-C9F07_31890;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455253.1;locus_tag=C9F07_31890;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01001277.1 1 2469 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001277.1 Genbank region 1 2469 . + . ID=PYKI01001277.1:1..2469;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001277.1 Genbank gene 420 1913 . + . ID=gene-C9F07_11960;Name=C9F07_11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11960 PYKI01001277.1 Protein Homology CDS 420 1913 . + 0 ID=cds-TGD87817.1;Parent=gene-C9F07_11960;Dbxref=NCBI_GP:TGD87817.1;Name=TGD87817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=C9F07_11960;product=diguanylate cylase;protein_id=TGD87817.1;transl_table=11 PYKI01001277.1 Genbank gene 1954 2469 . + . ID=gene-C9F07_11965;Name=C9F07_11965;end_range=2469,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11965;partial=true PYKI01001277.1 Protein Homology CDS 1954 2469 . + 0 ID=cds-TGD87818.1;Parent=gene-C9F07_11965;Dbxref=NCBI_GP:TGD87818.1;Name=TGD87818.1;end_range=2469,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456228.1;locus_tag=C9F07_11965;partial=true;product=hypothetical protein;protein_id=TGD87818.1;transl_table=11 ##sequence-region PYKI01002827.1 1 2468 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002827.1 Genbank region 1 2468 . + . ID=PYKI01002827.1:1..2468;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002827.1 Genbank gene 1 371 . + . ID=gene-C9F07_28275;Name=C9F07_28275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28275;partial=true;start_range=.,1 PYKI01002827.1 Protein Homology CDS 1 371 . + 2 ID=cds-TGD45610.1;Parent=gene-C9F07_28275;Dbxref=NCBI_GP:TGD45610.1;Name=TGD45610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=C9F07_28275;partial=true;product=MFS transporter;protein_id=TGD45610.1;start_range=.,1;transl_table=11 PYKI01002827.1 Genbank gene 589 2010 . + . ID=gene-C9F07_28280;Name=C9F07_28280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28280 PYKI01002827.1 Protein Homology CDS 589 2010 . + 0 ID=cds-TGD45611.1;Parent=gene-C9F07_28280;Dbxref=NCBI_GP:TGD45611.1;Name=TGD45611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455457.1;locus_tag=C9F07_28280;product=amino acid permease;protein_id=TGD45611.1;transl_table=11 PYKI01002827.1 Genbank gene 2292 2468 . - . ID=gene-C9F07_28285;Name=C9F07_28285;end_range=2468,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28285;partial=true PYKI01002827.1 Protein Homology CDS 2292 2468 . - 0 ID=cds-TGD45612.1;Parent=gene-C9F07_28285;Dbxref=NCBI_GP:TGD45612.1;Name=TGD45612.1;end_range=2468,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455458.1;locus_tag=C9F07_28285;partial=true;product=pyruvate formate lyase-activating protein;protein_id=TGD45612.1;transl_table=11 ##sequence-region PYKI01002796.1 1 2468 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002796.1 Genbank region 1 2468 . + . ID=PYKI01002796.1:1..2468;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002796.1 Genbank gene 1 456 . + . ID=gene-C9F07_27945;Name=C9F07_27945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27945;partial=true;start_range=.,1 PYKI01002796.1 Protein Homology CDS 1 456 . + 0 ID=cds-TGD45959.1;Parent=gene-C9F07_27945;Dbxref=NCBI_GP:TGD45959.1;Name=TGD45959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=C9F07_27945;partial=true;product=molecular chaperone TorD;protein_id=TGD45959.1;start_range=.,1;transl_table=11 PYKI01002796.1 Genbank gene 646 2046 . + . ID=gene-C9F07_27950;Name=C9F07_27950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27950 PYKI01002796.1 Protein Homology CDS 646 2046 . + 0 ID=cds-TGD45960.1;Parent=gene-C9F07_27950;Dbxref=NCBI_GP:TGD45960.1;Name=TGD45960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458119.1;locus_tag=C9F07_27950;product=cytochrome-c peroxidase;protein_id=TGD45960.1;transl_table=11 PYKI01002796.1 Genbank pseudogene 2052 2408 . + . ID=gene-C9F07_27955;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=pseudogene;locus_tag=C9F07_27955;pseudo=true PYKI01002796.1 Protein Homology CDS 2052 2408 . + 0 ID=cds-C9F07_27955;Parent=gene-C9F07_27955;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=ccmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=C9F07_27955;product=heme ABC exporter ATP-binding protein CcmA;pseudo=true;transl_table=11 ##sequence-region PYKI01001177.1 1 2466 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001177.1 Genbank region 1 2466 . + . ID=PYKI01001177.1:1..2466;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001177.1 Genbank gene 137 213 . + . ID=gene-C9F07_10990;Name=C9F07_10990;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_10990 PYKI01001177.1 tRNAscan-SE tRNA 137 213 . + . ID=rna-C9F07_10990;Parent=gene-C9F07_10990;anticodon=(pos:171..173);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_10990;product=tRNA-Asp PYKI01001177.1 tRNAscan-SE exon 137 213 . + . ID=exon-C9F07_10990-1;Parent=rna-C9F07_10990;anticodon=(pos:171..173);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_10990;product=tRNA-Asp PYKI01001177.1 Genbank pseudogene 437 520 . - . ID=gene-C9F07_10995;Name=C9F07_10995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10995;pseudo=true PYKI01001177.1 Protein Homology CDS 437 520 . - 0 ID=cds-C9F07_10995;Parent=gene-C9F07_10995;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001242259.1;locus_tag=C9F07_10995;product=addiction module antidote protein%2C HigA family;pseudo=true;transl_table=11 PYKI01001177.1 Genbank gene 533 1582 . - . ID=gene-C9F07_11000;Name=C9F07_11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11000 PYKI01001177.1 Protein Homology CDS 533 1582 . - 0 ID=cds-TGD92627.1;Parent=gene-C9F07_11000;Dbxref=NCBI_GP:TGD92627.1;Name=TGD92627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=C9F07_11000;product=cytoplasmic protein;protein_id=TGD92627.1;transl_table=11 PYKI01001177.1 Genbank gene 1593 2453 . - . ID=gene-C9F07_11005;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=C9F07_11005 PYKI01001177.1 Protein Homology CDS 1593 2453 . - 0 ID=cds-TGD92628.1;Parent=gene-C9F07_11005;Dbxref=NCBI_GP:TGD92628.1;Name=TGD92628.1;gbkey=CDS;gene=tssG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410578.1;locus_tag=C9F07_11005;product=type VI secretion system baseplate subunit TssG;protein_id=TGD92628.1;transl_table=11 ##sequence-region PYKI01000423.1 1 2427 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000423.1 Genbank region 1 2427 . + . ID=PYKI01000423.1:1..2427;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000423.1 Genbank gene 134 352 . + . ID=gene-C9F07_03260;Name=C9F07_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03260 PYKI01000423.1 Protein Homology CDS 134 352 . + 0 ID=cds-TGE20842.1;Parent=gene-C9F07_03260;Dbxref=NCBI_GP:TGE20842.1;Name=TGE20842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455816.1;locus_tag=C9F07_03260;product=phage shock protein D;protein_id=TGE20842.1;transl_table=11 PYKI01000423.1 Genbank gene 428 742 . + . ID=gene-C9F07_03265;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=C9F07_03265 PYKI01000423.1 Protein Homology CDS 428 742 . + 0 ID=cds-TGE20843.1;Parent=gene-C9F07_03265;Dbxref=NCBI_GP:TGE20843.1;Name=TGE20843.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455817.1;locus_tag=C9F07_03265;product=thiosulfate sulfurtransferase PspE;protein_id=TGE20843.1;transl_table=11 PYKI01000423.1 Genbank gene 885 2288 . + . ID=gene-C9F07_03270;Name=C9F07_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03270 PYKI01000423.1 Protein Homology CDS 885 2288 . + 0 ID=cds-TGE20844.1;Parent=gene-C9F07_03270;Dbxref=NCBI_GP:TGE20844.1;Name=TGE20844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460643.3;locus_tag=C9F07_03270;product=hypothetical protein;protein_id=TGE20844.1;transl_table=11 PYKI01000423.1 Genbank gene 2285 2427 . + . ID=gene-C9F07_03275;Name=C9F07_03275;end_range=2427,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03275;partial=true PYKI01000423.1 Protein Homology CDS 2285 2427 . + 0 ID=cds-TGE20845.1;Parent=gene-C9F07_03275;Dbxref=NCBI_GP:TGE20845.1;Name=TGE20845.1;end_range=2427,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=C9F07_03275;partial=true;product=TIGR01620 family protein;protein_id=TGE20845.1;transl_table=11 ##sequence-region PYKI01002833.1 1 2462 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002833.1 Genbank region 1 2462 . + . ID=PYKI01002833.1:1..2462;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002833.1 Genbank gene 1 1064 . + . ID=gene-C9F07_28335;Name=C9F07_28335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28335;partial=true;start_range=.,1 PYKI01002833.1 Protein Homology CDS 1 1064 . + 2 ID=cds-TGD45585.1;Parent=gene-C9F07_28335;Dbxref=NCBI_GP:TGD45585.1;Name=TGD45585.1;Note=structural flagella protein%3B individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella%2C termed phase 1 and phase 2%2C each specified by separate structural genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079803.1;locus_tag=C9F07_28335;partial=true;product=flagellin FliC;protein_id=TGD45585.1;start_range=.,1;transl_table=11 PYKI01002833.1 Genbank gene 1132 1671 . + . ID=gene-C9F07_28340;Name=fljA;gbkey=Gene;gene=fljA;gene_biotype=protein_coding;locus_tag=C9F07_28340 PYKI01002833.1 Protein Homology CDS 1132 1671 . + 0 ID=cds-TGD45586.1;Parent=gene-C9F07_28340;Dbxref=NCBI_GP:TGD45586.1;Name=TGD45586.1;gbkey=CDS;gene=fljA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461697.1;locus_tag=C9F07_28340;product=phase 1 flagellin gene repressor FljA;protein_id=TGD45586.1;transl_table=11 PYKI01002833.1 Genbank pseudogene 1699 2055 . + . ID=gene-C9F07_28345;Name=C9F07_28345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28345;pseudo=true PYKI01002833.1 Protein Homology CDS 1699 2055 . + 0 ID=cds-C9F07_28345;Parent=gene-C9F07_28345;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142400.1;locus_tag=C9F07_28345;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002833.1 Genbank gene 2337 2462 . - . ID=gene-C9F07_28350;Name=C9F07_28350;end_range=2462,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28350;partial=true PYKI01002833.1 Protein Homology CDS 2337 2462 . - 0 ID=cds-TGD45587.1;Parent=gene-C9F07_28350;Dbxref=NCBI_GP:TGD45587.1;Name=TGD45587.1;end_range=2462,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458725.1;locus_tag=C9F07_28350;partial=true;product=integrase;protein_id=TGD45587.1;transl_table=11 ##sequence-region PYKI01001940.1 1 2462 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001940.1 Genbank region 1 2462 . + . ID=PYKI01001940.1:1..2462;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001940.1 Genbank gene 1 753 . - . ID=gene-C9F07_18705;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=C9F07_18705;partial=true;start_range=.,1 PYKI01001940.1 Protein Homology CDS 1 753 . - 0 ID=cds-TGD60667.1;Parent=gene-C9F07_18705;Dbxref=NCBI_GP:TGD60667.1;Name=TGD60667.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457279.1;locus_tag=C9F07_18705;partial=true;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=TGD60667.1;start_range=.,1;transl_table=11 PYKI01001940.1 Genbank gene 756 1253 . - . ID=gene-C9F07_18710;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=C9F07_18710 PYKI01001940.1 Protein Homology CDS 756 1253 . - 0 ID=cds-TGD60668.1;Parent=gene-C9F07_18710;Dbxref=NCBI_GP:TGD60668.1;Name=TGD60668.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457280.1;locus_tag=C9F07_18710;product=type III secretion system translocator chaperone SicA;protein_id=TGD60668.1;transl_table=11 PYKI01001940.1 Genbank pseudogene 1391 2461 . - . ID=gene-C9F07_18715;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=pseudogene;locus_tag=C9F07_18715;pseudo=true PYKI01001940.1 Protein Homology CDS 1391 2461 . - 0 ID=cds-C9F07_18715;Parent=gene-C9F07_18715;Note=internal stop;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=C9F07_18715;product=SPI-1 type III secretion system export apparatus protein SpaS;pseudo=true;transl_table=11 ##sequence-region PYKI01002132.1 1 2457 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002132.1 Genbank region 1 2457 . + . ID=PYKI01002132.1:1..2457;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002132.1 Genbank gene 1 1260 . - . ID=gene-C9F07_20630;Name=C9F07_20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20630;partial=true;start_range=.,1 PYKI01002132.1 Protein Homology CDS 1 1260 . - 0 ID=cds-TGD57843.1;Parent=gene-C9F07_20630;Dbxref=NCBI_GP:TGD57843.1;Name=TGD57843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=C9F07_20630;partial=true;product=L-arabinose isomerase;protein_id=TGD57843.1;start_range=.,1;transl_table=11 PYKI01002132.1 Genbank gene 1271 2457 . - . ID=gene-C9F07_20635;Name=C9F07_20635;end_range=2457,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20635;partial=true PYKI01002132.1 Protein Homology CDS 1271 2457 . - 2 ID=cds-TGD57844.1;Parent=gene-C9F07_20635;Dbxref=NCBI_GP:TGD57844.1;Name=TGD57844.1;end_range=2457,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454715.1;locus_tag=C9F07_20635;partial=true;product=ribulokinase;protein_id=TGD57844.1;transl_table=11 ##sequence-region PYKI01002288.1 1 10434 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002288.1 Genbank region 1 10434 . + . ID=PYKI01002288.1:1..10434;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002288.1 Genbank pseudogene 96 1298 . - . ID=gene-C9F07_22435;Name=C9F07_22435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22435;pseudo=true PYKI01002288.1 Protein Homology CDS 96 1298 . - 0 ID=cds-C9F07_22435;Parent=gene-C9F07_22435;Note=involved in fimbria production%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004592353.1;locus_tag=C9F07_22435;product=outer membrane usher protein;pseudo=true;transl_table=11 PYKI01002288.1 Genbank gene 1366 2052 . - . ID=gene-C9F07_22440;Name=C9F07_22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22440 PYKI01002288.1 Protein Homology CDS 1366 2052 . - 0 ID=cds-TGD54820.1;Parent=gene-C9F07_22440;Dbxref=NCBI_GP:TGD54820.1;Name=TGD54820.1;Note=fimbrial protein chaperone%3B interacts with BcfD;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=C9F07_22440;product=fimbrial chaperone protein;protein_id=TGD54820.1;transl_table=11 PYKI01002288.1 Genbank gene 2153 2695 . - . ID=gene-C9F07_22445;Name=C9F07_22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22445 PYKI01002288.1 Protein Homology CDS 2153 2695 . - 0 ID=cds-TGD54821.1;Parent=gene-C9F07_22445;Dbxref=NCBI_GP:TGD54821.1;Name=TGD54821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=C9F07_22445;product=fimbrial protein;protein_id=TGD54821.1;transl_table=11 PYKI01002288.1 Genbank gene 3126 3821 . - . ID=gene-C9F07_22450;Name=C9F07_22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22450 PYKI01002288.1 Protein Homology CDS 3126 3821 . - 0 ID=cds-TGD54822.1;Parent=gene-C9F07_22450;Dbxref=NCBI_GP:TGD54822.1;Name=TGD54822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527260.1;locus_tag=C9F07_22450;product=cytoplasmic protein;protein_id=TGD54822.1;transl_table=11 PYKI01002288.1 Genbank pseudogene 4110 7106 . - . ID=gene-C9F07_22455;Name=C9F07_22455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22455;pseudo=true PYKI01002288.1 Protein Homology CDS 4110 7106 . - 0 ID=cds-C9F07_22455;Parent=gene-C9F07_22455;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=C9F07_22455;product=chitinase;pseudo=true;transl_table=11 PYKI01002288.1 Genbank gene 7199 9298 . - . ID=gene-C9F07_22460;Name=C9F07_22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22460 PYKI01002288.1 Protein Homology CDS 7199 9298 . - 0 ID=cds-TGD54823.1;Parent=gene-C9F07_22460;Dbxref=NCBI_GP:TGD54823.1;Name=TGD54823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454628.1;locus_tag=C9F07_22460;product=chitinase;protein_id=TGD54823.1;transl_table=11 PYKI01002288.1 Genbank gene 9679 10122 . + . ID=gene-C9F07_22465;Name=C9F07_22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22465 PYKI01002288.1 Protein Homology CDS 9679 10122 . + 0 ID=cds-TGD54824.1;Parent=gene-C9F07_22465;Dbxref=NCBI_GP:TGD54824.1;Name=TGD54824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454627.1;locus_tag=C9F07_22465;product=transcriptional regulator;protein_id=TGD54824.1;transl_table=11 PYKI01002288.1 Genbank gene 10139 10434 . + . ID=gene-C9F07_22470;Name=C9F07_22470;end_range=10434,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22470;partial=true PYKI01002288.1 Protein Homology CDS 10139 10434 . + 0 ID=cds-TGD54825.1;Parent=gene-C9F07_22470;Dbxref=NCBI_GP:TGD54825.1;Name=TGD54825.1;end_range=10434,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=C9F07_22470;partial=true;product=hypothetical protein;protein_id=TGD54825.1;transl_table=11 ##sequence-region PYKI01000584.1 1 2454 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000584.1 Genbank region 1 2454 . + . ID=PYKI01000584.1:1..2454;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000584.1 Genbank gene 116 1126 . - . ID=gene-C9F07_04950;Name=C9F07_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04950 PYKI01000584.1 Protein Homology CDS 116 1126 . - 0 ID=cds-TGE14363.1;Parent=gene-C9F07_04950;Dbxref=NCBI_GP:TGE14363.1;Name=TGE14363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455716.1;locus_tag=C9F07_04950;product=type III secretion system effector SifA;protein_id=TGE14363.1;transl_table=11 PYKI01000584.1 Genbank gene 1455 2318 . - . ID=gene-C9F07_04955;Name=C9F07_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04955 PYKI01000584.1 Protein Homology CDS 1455 2318 . - 0 ID=cds-TGE14364.1;Parent=gene-C9F07_04955;Dbxref=NCBI_GP:TGE14364.1;Name=TGE14364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455717.1;locus_tag=C9F07_04955;product=spermidine/putrescine ABC transporter permease;protein_id=TGE14364.1;transl_table=11 ##sequence-region PYKI01002826.1 1 2453 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002826.1 Genbank region 1 2453 . + . ID=PYKI01002826.1:1..2453;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002826.1 Genbank gene 90 176 . - . ID=gene-C9F07_28260;Name=C9F07_28260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28260 PYKI01002826.1 Protein Homology CDS 90 176 . - 0 ID=cds-TGD45619.1;Parent=gene-C9F07_28260;Dbxref=NCBI_GP:TGD45619.1;Name=TGD45619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=C9F07_28260;product=leu operon leader peptide;protein_id=TGD45619.1;transl_table=11 PYKI01002826.1 Genbank gene 833 1777 . + . ID=gene-C9F07_28265;Name=C9F07_28265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28265 PYKI01002826.1 Protein Homology CDS 833 1777 . + 0 ID=cds-TGD45620.1;Parent=gene-C9F07_28265;Dbxref=NCBI_GP:TGD45620.1;Name=TGD45620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=C9F07_28265;product=transcriptional regulator;protein_id=TGD45620.1;transl_table=11 PYKI01002826.1 Genbank gene 2099 2453 . + . ID=gene-C9F07_28270;Name=C9F07_28270;end_range=2453,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28270;partial=true PYKI01002826.1 Protein Homology CDS 2099 2453 . + 0 ID=cds-TGD45621.1;Parent=gene-C9F07_28270;Dbxref=NCBI_GP:TGD45621.1;Name=TGD45621.1;end_range=2453,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454728.1;locus_tag=C9F07_28270;partial=true;product=hypothetical protein;protein_id=TGD45621.1;transl_table=11 ##sequence-region PYKI01000276.1 1 2448 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000276.1 Genbank region 1 2448 . + . ID=PYKI01000276.1:1..2448;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000276.1 Genbank gene 14 142 . - . ID=gene-C9F07_01795;Name=C9F07_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01795 PYKI01000276.1 Protein Homology CDS 14 142 . - 0 ID=cds-TGE27831.1;Parent=gene-C9F07_01795;Dbxref=NCBI_GP:TGE27831.1;Name=TGE27831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219073.1;locus_tag=C9F07_01795;product=DNA metabolism protein;protein_id=TGE27831.1;transl_table=11 PYKI01000276.1 Genbank gene 177 2066 . - . ID=gene-C9F07_01800;Name=C9F07_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01800 PYKI01000276.1 Protein Homology CDS 177 2066 . - 0 ID=cds-TGE27832.1;Parent=gene-C9F07_01800;Dbxref=NCBI_GP:TGE27832.1;Name=TGE27832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=C9F07_01800;product=phosphatase;protein_id=TGE27832.1;transl_table=11 ##sequence-region PYKI01002509.1 1 2445 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002509.1 Genbank region 1 2445 . + . ID=PYKI01002509.1:1..2445;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002509.1 Genbank gene 1 829 . - . ID=gene-C9F07_24865;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=C9F07_24865;partial=true;start_range=.,1 PYKI01002509.1 Protein Homology CDS 1 829 . - 0 ID=cds-TGD50196.1;Parent=gene-C9F07_24865;Dbxref=NCBI_GP:TGD50196.1;Name=TGD50196.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455468.1;locus_tag=C9F07_24865;partial=true;product=30S ribosomal protein S1;protein_id=TGD50196.1;start_range=.,1;transl_table=11 PYKI01002509.1 Genbank gene 943 1626 . - . ID=gene-C9F07_24870;Name=C9F07_24870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24870 PYKI01002509.1 Protein Homology CDS 943 1626 . - 0 ID=cds-TGD50197.1;Parent=gene-C9F07_24870;Dbxref=NCBI_GP:TGD50197.1;Name=TGD50197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=C9F07_24870;product=cytidylate kinase;protein_id=TGD50197.1;transl_table=11 PYKI01002509.1 Genbank gene 1799 2445 . - . ID=gene-C9F07_24875;Name=C9F07_24875;end_range=2445,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24875;partial=true PYKI01002509.1 Protein Homology CDS 1799 2445 . - 2 ID=cds-TGD50198.1;Parent=gene-C9F07_24875;Dbxref=NCBI_GP:TGD50198.1;Name=TGD50198.1;end_range=2445,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=C9F07_24875;partial=true;product=metalloprotease;protein_id=TGD50198.1;transl_table=11 ##sequence-region PYKI01003044.1 1 2443 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003044.1 Genbank region 1 2443 . + . ID=PYKI01003044.1:1..2443;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003044.1 Genbank pseudogene 34 231 . - . ID=gene-C9F07_30550;Name=C9F07_30550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30550;pseudo=true PYKI01003044.1 Protein Homology CDS 34 231 . - 0 ID=cds-C9F07_30550;Parent=gene-C9F07_30550;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456831.1;locus_tag=C9F07_30550;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01003044.1 Genbank gene 221 424 . - . ID=gene-C9F07_30555;Name=C9F07_30555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30555 PYKI01003044.1 Protein Homology CDS 221 424 . - 0 ID=cds-TGD41026.1;Parent=gene-C9F07_30555;Dbxref=NCBI_GP:TGD41026.1;Name=TGD41026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751919.1;locus_tag=C9F07_30555;product=hypothetical protein;protein_id=TGD41026.1;transl_table=11 PYKI01003044.1 Genbank gene 726 1916 . - . ID=gene-C9F07_30560;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=C9F07_30560 PYKI01003044.1 Protein Homology CDS 726 1916 . - 0 ID=cds-TGD41027.1;Parent=gene-C9F07_30560;Dbxref=NCBI_GP:TGD41027.1;Name=TGD41027.1;gbkey=CDS;gene=glpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=C9F07_30560;product=anaerobic glycerol-3-phosphate dehydrogenase subunit C;protein_id=TGD41027.1;transl_table=11 PYKI01003044.1 Genbank gene 1913 2443 . - . ID=gene-C9F07_30565;Name=glpB;end_range=2443,.;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=C9F07_30565;partial=true PYKI01003044.1 Protein Homology CDS 1913 2443 . - 0 ID=cds-TGD41028.1;Parent=gene-C9F07_30565;Dbxref=NCBI_GP:TGD41028.1;Name=TGD41028.1;end_range=2443,.;gbkey=CDS;gene=glpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456828.1;locus_tag=C9F07_30565;partial=true;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=TGD41028.1;transl_table=11 ##sequence-region PYKI01000489.1 1 2443 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000489.1 Genbank region 1 2443 . + . ID=PYKI01000489.1:1..2443;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000489.1 Genbank gene 1 426 . - . ID=gene-C9F07_03935;Name=C9F07_03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03935;partial=true;start_range=.,1 PYKI01000489.1 Protein Homology CDS 1 426 . - 0 ID=cds-TGE18010.1;Parent=gene-C9F07_03935;Dbxref=NCBI_GP:TGE18010.1;Name=TGE18010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457832.1;locus_tag=C9F07_03935;partial=true;product=hypothetical protein;protein_id=TGE18010.1;start_range=.,1;transl_table=11 PYKI01000489.1 Genbank gene 570 899 . + . ID=gene-C9F07_03940;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=C9F07_03940 PYKI01000489.1 Protein Homology CDS 570 899 . + 0 ID=cds-TGE18011.1;Parent=gene-C9F07_03940;Dbxref=NCBI_GP:TGE18011.1;Name=TGE18011.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457831.1;locus_tag=C9F07_03940;product=thiol reductase thioredoxin;protein_id=TGE18011.1;transl_table=11 PYKI01000489.1 Genbank gene 1096 1230 . + . ID=gene-C9F07_03945;Name=C9F07_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03945 PYKI01000489.1 Protein Homology CDS 1096 1230 . + 0 ID=cds-TGE18013.1;Parent=gene-C9F07_03945;Dbxref=NCBI_GP:TGE18013.1;Name=TGE18013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=C9F07_03945;product=rho operon leader peptide;protein_id=TGE18013.1;transl_table=11 PYKI01000489.1 Genbank gene 1318 2443 . + . ID=gene-C9F07_03950;Name=rho;end_range=2443,.;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=C9F07_03950;partial=true PYKI01000489.1 Protein Homology CDS 1318 2443 . + 0 ID=cds-TGE18012.1;Parent=gene-C9F07_03950;Dbxref=NCBI_GP:TGE18012.1;Name=TGE18012.1;end_range=2443,.;gbkey=CDS;gene=rho;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457830.1;locus_tag=C9F07_03950;partial=true;product=transcription termination factor Rho;protein_id=TGE18012.1;transl_table=11 ##sequence-region PYKI01000967.1 1 2443 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000967.1 Genbank region 1 2443 . + . ID=PYKI01000967.1:1..2443;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000967.1 Genbank gene 1 646 . - . ID=gene-C9F07_08830;Name=C9F07_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08830;partial=true;start_range=.,1 PYKI01000967.1 Protein Homology CDS 1 646 . - 0 ID=cds-TGE00403.1;Parent=gene-C9F07_08830;Dbxref=NCBI_GP:TGE00403.1;Name=TGE00403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454744.1;locus_tag=C9F07_08830;partial=true;product=cell division protein FtsA;protein_id=TGE00403.1;start_range=.,1;transl_table=11 PYKI01000967.1 Genbank gene 643 1473 . - . ID=gene-C9F07_08835;Name=C9F07_08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08835 PYKI01000967.1 Protein Homology CDS 643 1473 . - 0 ID=cds-TGE00404.1;Parent=gene-C9F07_08835;Dbxref=NCBI_GP:TGE00404.1;Name=TGE00404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454743.1;locus_tag=C9F07_08835;product=cell division protein FtsQ;protein_id=TGE00404.1;transl_table=11 PYKI01000967.1 Genbank gene 1475 2395 . - . ID=gene-C9F07_08840;Name=ddl;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=C9F07_08840 PYKI01000967.1 Protein Homology CDS 1475 2395 . - 0 ID=cds-TGE00405.1;Parent=gene-C9F07_08840;Dbxref=NCBI_GP:TGE00405.1;Name=TGE00405.1;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;gbkey=CDS;gene=ddl;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454742.1;locus_tag=C9F07_08840;product=D-alanine--D-alanine ligase;protein_id=TGE00405.1;transl_table=11 ##sequence-region PYKI01001991.1 1 2441 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001991.1 Genbank region 1 2441 . + . ID=PYKI01001991.1:1..2441;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001991.1 Genbank gene 1 375 . - . ID=gene-C9F07_19210;Name=C9F07_19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19210;partial=true;start_range=.,1 PYKI01001991.1 Protein Homology CDS 1 375 . - 0 ID=cds-TGD60198.1;Parent=gene-C9F07_19210;Dbxref=NCBI_GP:TGD60198.1;Name=TGD60198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455885.1;locus_tag=C9F07_19210;partial=true;product=hypothetical protein;protein_id=TGD60198.1;start_range=.,1;transl_table=11 PYKI01001991.1 Genbank gene 592 1131 . + . ID=gene-C9F07_19215;Name=C9F07_19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19215 PYKI01001991.1 Protein Homology CDS 592 1131 . + 0 ID=cds-TGD60199.1;Parent=gene-C9F07_19215;Dbxref=NCBI_GP:TGD60199.1;Name=TGD60199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=C9F07_19215;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=TGD60199.1;transl_table=11 PYKI01001991.1 Genbank gene 1128 2108 . - . ID=gene-C9F07_19220;Name=C9F07_19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19220 PYKI01001991.1 Protein Homology CDS 1128 2108 . - 0 ID=cds-TGD60200.1;Parent=gene-C9F07_19220;Dbxref=NCBI_GP:TGD60200.1;Name=TGD60200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455887.1;locus_tag=C9F07_19220;product=hypothetical protein;protein_id=TGD60200.1;transl_table=11 PYKI01001991.1 Genbank gene 2215 2441 . + . ID=gene-C9F07_19225;Name=C9F07_19225;end_range=2441,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19225;partial=true PYKI01001991.1 Protein Homology CDS 2215 2441 . + 0 ID=cds-TGD60201.1;Parent=gene-C9F07_19225;Dbxref=NCBI_GP:TGD60201.1;Name=TGD60201.1;end_range=2441,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455888.1;locus_tag=C9F07_19225;partial=true;product=hypothetical protein;protein_id=TGD60201.1;transl_table=11 ##sequence-region PYKI01001675.1 1 2437 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001675.1 Genbank region 1 2437 . + . ID=PYKI01001675.1:1..2437;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001675.1 Genbank gene 1 776 . + . ID=gene-C9F07_15995;Name=C9F07_15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15995;partial=true;start_range=.,1 PYKI01001675.1 Protein Homology CDS 1 776 . + 2 ID=cds-TGD70096.1;Parent=gene-C9F07_15995;Dbxref=NCBI_GP:TGD70096.1;Name=TGD70096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456601.1;locus_tag=C9F07_15995;partial=true;product=propanediol utilization protein;protein_id=TGD70096.1;start_range=.,1;transl_table=11 PYKI01001675.1 Genbank pseudogene 773 2128 . + . ID=gene-C9F07_16000;Name=C9F07_16000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16000;pseudo=true PYKI01001675.1 Protein Homology CDS 773 2128 . + 0 ID=cds-C9F07_16000;Parent=gene-C9F07_16000;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=C9F07_16000;product=electron transport complex protein RnfC;pseudo=true;transl_table=11 PYKI01001675.1 Genbank gene 2131 2437 . + . ID=gene-C9F07_16005;Name=C9F07_16005;end_range=2437,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16005;partial=true PYKI01001675.1 Protein Homology CDS 2131 2437 . + 0 ID=cds-TGD70097.1;Parent=gene-C9F07_16005;Dbxref=NCBI_GP:TGD70097.1;Name=TGD70097.1;end_range=2437,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=C9F07_16005;partial=true;product=hypothetical protein;protein_id=TGD70097.1;transl_table=11 ##sequence-region PYKI01003520.1 1 2436 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003520.1 Genbank region 1 2436 . + . ID=PYKI01003520.1:1..2436;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003520.1 Genbank gene 1 969 . + . ID=gene-C9F07_35495;Name=C9F07_35495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35495;partial=true;start_range=.,1 PYKI01003520.1 Protein Homology CDS 1 969 . + 0 ID=cds-TGD31537.1;Parent=gene-C9F07_35495;Dbxref=NCBI_GP:TGD31537.1;Name=TGD31537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461465.1;locus_tag=C9F07_35495;partial=true;product=dimethyl sulfoxide reductase subunit A;protein_id=TGD31537.1;start_range=.,1;transl_table=11 PYKI01003520.1 Genbank gene 966 1595 . + . ID=gene-C9F07_35500;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=C9F07_35500 PYKI01003520.1 Protein Homology CDS 966 1595 . + 0 ID=cds-TGD31538.1;Parent=gene-C9F07_35500;Dbxref=NCBI_GP:TGD31538.1;Name=TGD31538.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=C9F07_35500;product=dimethylsulfoxide reductase%2C chain B;protein_id=TGD31538.1;transl_table=11 PYKI01003520.1 Genbank gene 1588 2397 . + . ID=gene-C9F07_35505;Name=C9F07_35505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35505 PYKI01003520.1 Protein Homology CDS 1588 2397 . + 0 ID=cds-TGD31539.1;Parent=gene-C9F07_35505;Dbxref=NCBI_GP:TGD31539.1;Name=TGD31539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457060.1;locus_tag=C9F07_35505;product=dimethyl sulfoxide reductase;protein_id=TGD31539.1;transl_table=11 ##sequence-region PYKI01001344.1 1 5343 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001344.1 Genbank region 1 5343 . + . ID=PYKI01001344.1:1..5343;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001344.1 Genbank gene 1 731 . + . ID=gene-C9F07_12550;Name=C9F07_12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12550;partial=true;start_range=.,1 PYKI01001344.1 Protein Homology CDS 1 731 . + 2 ID=cds-TGD85287.1;Parent=gene-C9F07_12550;Dbxref=NCBI_GP:TGD85287.1;Name=TGD85287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=C9F07_12550;partial=true;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=TGD85287.1;start_range=.,1;transl_table=11 PYKI01001344.1 Genbank gene 812 1948 . - . ID=gene-C9F07_12555;Name=C9F07_12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12555 PYKI01001344.1 Protein Homology CDS 812 1948 . - 0 ID=cds-TGD85288.1;Parent=gene-C9F07_12555;Dbxref=NCBI_GP:TGD85288.1;Name=TGD85288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=C9F07_12555;product=ribosomal RNA large subunit methyltransferase G;protein_id=TGD85288.1;transl_table=11 PYKI01001344.1 Genbank gene 2031 2531 . + . ID=gene-C9F07_12560;Name=C9F07_12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12560 PYKI01001344.1 Protein Homology CDS 2031 2531 . + 0 ID=cds-TGD85289.1;Parent=gene-C9F07_12560;Dbxref=NCBI_GP:TGD85289.1;Name=TGD85289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457610.1;locus_tag=C9F07_12560;product=metal-dependent hydrolase;protein_id=TGD85289.1;transl_table=11 PYKI01001344.1 Genbank gene 2683 3375 . + . ID=gene-C9F07_12565;Name=C9F07_12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12565 PYKI01001344.1 Protein Homology CDS 2683 3375 . + 0 ID=cds-TGD85290.1;Parent=gene-C9F07_12565;Dbxref=NCBI_GP:TGD85290.1;Name=TGD85290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457611.1;locus_tag=C9F07_12565;product=vancomycin high temperature exclusion protein;protein_id=TGD85290.1;transl_table=11 PYKI01001344.1 Genbank gene 3464 4462 . + . ID=gene-C9F07_12570;Name=C9F07_12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12570 PYKI01001344.1 Protein Homology CDS 3464 4462 . + 0 ID=cds-TGD85291.1;Parent=gene-C9F07_12570;Dbxref=NCBI_GP:TGD85291.1;Name=TGD85291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=C9F07_12570;product=oxidoreductase;protein_id=TGD85291.1;transl_table=11 PYKI01001344.1 Genbank gene 4734 5343 . + . ID=gene-C9F07_12575;Name=C9F07_12575;end_range=5343,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12575;partial=true PYKI01001344.1 Protein Homology CDS 4734 5343 . + 0 ID=cds-TGD85292.1;Parent=gene-C9F07_12575;Dbxref=NCBI_GP:TGD85292.1;Name=TGD85292.1;end_range=5343,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457613.1;locus_tag=C9F07_12575;partial=true;product=hypothetical protein;protein_id=TGD85292.1;transl_table=11 ##sequence-region PYKI01001526.1 1 2432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001526.1 Genbank region 1 2432 . + . ID=PYKI01001526.1:1..2432;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001526.1 Genbank gene 1 417 . - . ID=gene-C9F07_14555;Name=C9F07_14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14555;partial=true;start_range=.,1 PYKI01001526.1 Protein Homology CDS 1 417 . - 0 ID=cds-TGD76433.1;Parent=gene-C9F07_14555;Dbxref=NCBI_GP:TGD76433.1;Name=TGD76433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411626.1;locus_tag=C9F07_14555;partial=true;product=helix-turn-helix domain-containing protein;protein_id=TGD76433.1;start_range=.,1;transl_table=11 PYKI01001526.1 Genbank gene 414 638 . - . ID=gene-C9F07_14560;Name=C9F07_14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14560 PYKI01001526.1 Protein Homology CDS 414 638 . - 0 ID=cds-TGD76430.1;Parent=gene-C9F07_14560;Dbxref=NCBI_GP:TGD76430.1;Name=TGD76430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401086.1;locus_tag=C9F07_14560;product=hypothetical protein;protein_id=TGD76430.1;transl_table=11 PYKI01001526.1 Genbank gene 635 1777 . - . ID=gene-C9F07_14565;Name=C9F07_14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14565 PYKI01001526.1 Protein Homology CDS 635 1777 . - 0 ID=cds-TGD76431.1;Parent=gene-C9F07_14565;Dbxref=NCBI_GP:TGD76431.1;Name=TGD76431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087402.1;locus_tag=C9F07_14565;product=peptidase;protein_id=TGD76431.1;transl_table=11 PYKI01001526.1 Genbank gene 1774 2328 . - . ID=gene-C9F07_14570;Name=C9F07_14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14570 PYKI01001526.1 Protein Homology CDS 1774 2328 . - 0 ID=cds-TGD76432.1;Parent=gene-C9F07_14570;Dbxref=NCBI_GP:TGD76432.1;Name=TGD76432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000515837.1;locus_tag=C9F07_14570;product=hypothetical protein;protein_id=TGD76432.1;transl_table=11 ##sequence-region PYKI01001373.1 1 2429 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001373.1 Genbank region 1 2429 . + . ID=PYKI01001373.1:1..2429;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001373.1 Genbank gene 10 513 . + . ID=gene-C9F07_12910;Name=C9F07_12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12910 PYKI01001373.1 Protein Homology CDS 10 513 . + 0 ID=cds-TGD84489.1;Parent=gene-C9F07_12910;Dbxref=NCBI_GP:TGD84489.1;Name=TGD84489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991995.1;locus_tag=C9F07_12910;product=RNA helicase;protein_id=TGD84489.1;transl_table=11 PYKI01001373.1 Genbank pseudogene 584 1078 . + . ID=gene-C9F07_12915;Name=C9F07_12915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12915;pseudo=true PYKI01001373.1 Protein Homology CDS 584 1078 . + 0 ID=cds-C9F07_12915;Parent=gene-C9F07_12915;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=C9F07_12915;product=TIGR00645 family protein;pseudo=true;transl_table=11 PYKI01001373.1 Genbank gene 1385 2429 . + . ID=gene-C9F07_12920;Name=C9F07_12920;end_range=2429,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12920;partial=true PYKI01001373.1 Protein Homology CDS 1385 2429 . + 0 ID=cds-TGD84488.1;Parent=gene-C9F07_12920;Dbxref=NCBI_GP:TGD84488.1;Name=TGD84488.1;end_range=2429,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=C9F07_12920;partial=true;product=methyl-accepting chemotaxis protein;protein_id=TGD84488.1;transl_table=11 ##sequence-region PYKI01000988.1 1 2428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000988.1 Genbank region 1 2428 . + . ID=PYKI01000988.1:1..2428;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000988.1 Genbank gene 1 1519 . + . ID=gene-C9F07_09025;Name=C9F07_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09025;partial=true;start_range=.,1 PYKI01000988.1 Protein Homology CDS 1 1519 . + 1 ID=cds-TGD99213.1;Parent=gene-C9F07_09025;Dbxref=NCBI_GP:TGD99213.1;Name=TGD99213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=C9F07_09025;partial=true;product=molecular chaperone DnaK;protein_id=TGD99213.1;start_range=.,1;transl_table=11 PYKI01000988.1 Genbank gene 1605 2428 . + . ID=gene-C9F07_09030;Name=C9F07_09030;end_range=2428,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09030;partial=true PYKI01000988.1 Protein Homology CDS 1605 2428 . + 0 ID=cds-TGD99214.1;Parent=gene-C9F07_09030;Dbxref=NCBI_GP:TGD99214.1;Name=TGD99214.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;end_range=2428,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454623.1;locus_tag=C9F07_09030;partial=true;product=molecular chaperone DnaJ;protein_id=TGD99214.1;transl_table=11 ##sequence-region PYKI01001676.1 1 2428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001676.1 Genbank region 1 2428 . + . ID=PYKI01001676.1:1..2428;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001676.1 Genbank pseudogene 74 922 . - . ID=gene-C9F07_16010;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=pseudogene;locus_tag=C9F07_16010;pseudo=true PYKI01001676.1 Protein Homology CDS 74 922 . - 0 ID=cds-C9F07_16010;Parent=gene-C9F07_16010;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIB transfers the phosphoryl group to the substrate%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=srlE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=C9F07_16010;product=PTS glucitol/sorbitol transporter subunit IIB;pseudo=true;transl_table=11 PYKI01001676.1 Genbank pseudogene 919 1482 . - . ID=gene-C9F07_16015;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=pseudogene;locus_tag=C9F07_16015;pseudo=true PYKI01001676.1 Protein Homology CDS 919 1482 . - 0 ID=cds-C9F07_16015;Parent=gene-C9F07_16015;Note=catalyzes the phosphorylation of incoming sugar substrates along with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site%3B internal stop;gbkey=CDS;gene=srlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=C9F07_16015;product=PTS glucitol/sorbitol transporter subunit IIC;pseudo=true;transl_table=11 PYKI01001676.1 Genbank gene 1735 2428 . + . ID=gene-C9F07_16020;Name=C9F07_16020;end_range=2428,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16020;partial=true PYKI01001676.1 Protein Homology CDS 1735 2428 . + 0 ID=cds-TGD70092.1;Parent=gene-C9F07_16020;Dbxref=NCBI_GP:TGD70092.1;Name=TGD70092.1;end_range=2428,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457224.1;locus_tag=C9F07_16020;partial=true;product=murein transglycosylase B;protein_id=TGD70092.1;transl_table=11 ##sequence-region PYKI01000409.1 1 2427 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000409.1 Genbank region 1 2427 . + . ID=PYKI01000409.1:1..2427;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000409.1 Genbank gene 1 264 . + . ID=gene-C9F07_03125;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=C9F07_03125;partial=true;start_range=.,1 PYKI01000409.1 Protein Homology CDS 1 264 . + 0 ID=cds-TGE21029.1;Parent=gene-C9F07_03125;Dbxref=NCBI_GP:TGE21029.1;Name=TGE21029.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456472.1;locus_tag=C9F07_03125;partial=true;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=TGE21029.1;start_range=.,1;transl_table=11 PYKI01000409.1 Genbank gene 261 1232 . + . ID=gene-C9F07_03130;Name=C9F07_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03130 PYKI01000409.1 Protein Homology CDS 261 1232 . + 0 ID=cds-TGE21030.1;Parent=gene-C9F07_03130;Dbxref=NCBI_GP:TGE21030.1;Name=TGE21030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456473.1;locus_tag=C9F07_03130;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=TGE21030.1;transl_table=11 PYKI01000409.1 Genbank gene 1281 1490 . - . ID=gene-C9F07_03135;Name=C9F07_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03135 PYKI01000409.1 Protein Homology CDS 1281 1490 . - 0 ID=cds-TGE21031.1;Parent=gene-C9F07_03135;Dbxref=NCBI_GP:TGE21031.1;Name=TGE21031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478351.1;locus_tag=C9F07_03135;product=hypothetical protein;protein_id=TGE21031.1;transl_table=11 PYKI01000409.1 Genbank gene 1468 2214 . - . ID=gene-C9F07_03140;Name=C9F07_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03140 PYKI01000409.1 Protein Homology CDS 1468 2214 . - 0 ID=cds-TGE21032.1;Parent=gene-C9F07_03140;Dbxref=NCBI_GP:TGE21032.1;Name=TGE21032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=C9F07_03140;product=copper homeostasis protein CutC;protein_id=TGE21032.1;transl_table=11 PYKI01000409.1 Genbank gene 2234 2427 . - . ID=gene-C9F07_03145;Name=C9F07_03145;end_range=2427,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03145;partial=true PYKI01000409.1 Protein Homology CDS 2234 2427 . - 2 ID=cds-TGE21033.1;Parent=gene-C9F07_03145;Dbxref=NCBI_GP:TGE21033.1;Name=TGE21033.1;end_range=2427,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=C9F07_03145;partial=true;product=metalloprotein;protein_id=TGE21033.1;transl_table=11 ##sequence-region PYKI01000275.1 1 2425 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000275.1 Genbank region 1 2425 . + . ID=PYKI01000275.1:1..2425;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000275.1 Genbank gene 1 837 . - . ID=gene-C9F07_01775;Name=C9F07_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01775;partial=true;start_range=.,1 PYKI01000275.1 Protein Homology CDS 1 837 . - 0 ID=cds-TGE27833.1;Parent=gene-C9F07_01775;Dbxref=NCBI_GP:TGE27833.1;Name=TGE27833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456328.1;locus_tag=C9F07_01775;partial=true;product=ATP-dependent helicase;protein_id=TGE27833.1;start_range=.,1;transl_table=11 PYKI01000275.1 Genbank gene 969 1313 . + . ID=gene-C9F07_01780;Name=C9F07_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01780 PYKI01000275.1 Protein Homology CDS 969 1313 . + 0 ID=cds-TGE27834.1;Parent=gene-C9F07_01780;Dbxref=NCBI_GP:TGE27834.1;Name=TGE27834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=C9F07_01780;product=RidA family protein;protein_id=TGE27834.1;transl_table=11 PYKI01000275.1 Genbank gene 1319 1498 . - . ID=gene-C9F07_01785;Name=C9F07_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01785 PYKI01000275.1 Protein Homology CDS 1319 1498 . - 0 ID=cds-TGE27835.1;Parent=gene-C9F07_01785;Dbxref=NCBI_GP:TGE27835.1;Name=TGE27835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456330.1;locus_tag=C9F07_01785;product=YoaH family protein;protein_id=TGE27835.1;transl_table=11 PYKI01000275.1 Genbank gene 1579 2425 . + . ID=gene-C9F07_01790;Name=pabB;end_range=2425,.;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=C9F07_01790;partial=true PYKI01000275.1 Protein Homology CDS 1579 2425 . + 0 ID=cds-TGE27836.1;Parent=gene-C9F07_01790;Dbxref=NCBI_GP:TGE27836.1;Name=TGE27836.1;Note=para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine;end_range=2425,.;gbkey=CDS;gene=pabB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456331.1;locus_tag=C9F07_01790;partial=true;product=aminodeoxychorismate synthase component I;protein_id=TGE27836.1;transl_table=11 ##sequence-region PYKI01000771.1 1 2420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000771.1 Genbank region 1 2420 . + . ID=PYKI01000771.1:1..2420;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000771.1 Genbank gene 1 372 . - . ID=gene-C9F07_06830;Name=C9F07_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06830;partial=true;start_range=.,1 PYKI01000771.1 Protein Homology CDS 1 372 . - 0 ID=cds-TGE09211.1;Parent=gene-C9F07_06830;Dbxref=NCBI_GP:TGE09211.1;Name=TGE09211.1;Note=tyrosine specific permease;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456501.1;locus_tag=C9F07_06830;partial=true;product=tyrosine transporter TyrP;protein_id=TGE09211.1;start_range=.,1;transl_table=11 PYKI01000771.1 Genbank gene 599 838 . + . ID=gene-C9F07_06835;Name=C9F07_06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06835 PYKI01000771.1 Protein Homology CDS 599 838 . + 0 ID=cds-TGE09207.1;Parent=gene-C9F07_06835;Dbxref=NCBI_GP:TGE09207.1;Name=TGE09207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456500.1;locus_tag=C9F07_06835;product=DUF2492 domain-containing protein;protein_id=TGE09207.1;transl_table=11 PYKI01000771.1 Genbank gene 884 1381 . - . ID=gene-C9F07_06840;Name=C9F07_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06840 PYKI01000771.1 Protein Homology CDS 884 1381 . - 0 ID=cds-TGE09208.1;Parent=gene-C9F07_06840;Dbxref=NCBI_GP:TGE09208.1;Name=TGE09208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=C9F07_06840;product=non-heme ferritin;protein_id=TGE09208.1;transl_table=11 PYKI01000771.1 Genbank gene 1621 1956 . - . ID=gene-C9F07_06845;Name=C9F07_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06845 PYKI01000771.1 Protein Homology CDS 1621 1956 . - 0 ID=cds-TGE09209.1;Parent=gene-C9F07_06845;Dbxref=NCBI_GP:TGE09209.1;Name=TGE09209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=C9F07_06845;product=hypothetical protein;protein_id=TGE09209.1;transl_table=11 PYKI01000771.1 Genbank gene 2212 2420 . + . ID=gene-C9F07_06850;Name=C9F07_06850;end_range=2420,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06850;partial=true PYKI01000771.1 Protein Homology CDS 2212 2420 . + 0 ID=cds-TGE09210.1;Parent=gene-C9F07_06850;Dbxref=NCBI_GP:TGE09210.1;Name=TGE09210.1;end_range=2420,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=C9F07_06850;partial=true;product=hypothetical protein;protein_id=TGE09210.1;transl_table=11 ##sequence-region PYKI01002036.1 1 2417 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002036.1 Genbank region 1 2417 . + . ID=PYKI01002036.1:1..2417;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002036.1 Genbank gene 179 628 . - . ID=gene-C9F07_19660;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=C9F07_19660 PYKI01002036.1 Protein Homology CDS 179 628 . - 0 ID=cds-TGD60008.1;Parent=gene-C9F07_19660;Dbxref=NCBI_GP:TGD60008.1;Name=TGD60008.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=C9F07_19660;product=L-alanine exporter AlaE;protein_id=TGD60008.1;transl_table=11 PYKI01002036.1 Genbank gene 654 833 . - . ID=gene-C9F07_19665;Name=C9F07_19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19665 PYKI01002036.1 Protein Homology CDS 654 833 . - 0 ID=cds-TGD60009.1;Parent=gene-C9F07_19665;Dbxref=NCBI_GP:TGD60009.1;Name=TGD60009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662860.1;locus_tag=C9F07_19665;product=hypothetical protein;protein_id=TGD60009.1;transl_table=11 PYKI01002036.1 Genbank gene 1041 1250 . - . ID=gene-C9F07_19670;Name=C9F07_19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19670 PYKI01002036.1 Protein Homology CDS 1041 1250 . - 0 ID=cds-TGD60010.1;Parent=gene-C9F07_19670;Dbxref=NCBI_GP:TGD60010.1;Name=TGD60010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219206.1;locus_tag=C9F07_19670;product=hypothetical protein;protein_id=TGD60010.1;transl_table=11 PYKI01002036.1 Genbank gene 1528 1929 . + . ID=gene-C9F07_19675;Name=C9F07_19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19675 PYKI01002036.1 Protein Homology CDS 1528 1929 . + 0 ID=cds-TGD60011.1;Parent=gene-C9F07_19675;Dbxref=NCBI_GP:TGD60011.1;Name=TGD60011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457198.1;locus_tag=C9F07_19675;product=DNA-binding protein StpA;protein_id=TGD60011.1;transl_table=11 PYKI01002036.1 Genbank gene 2019 2198 . - . ID=gene-C9F07_19680;Name=C9F07_19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19680 PYKI01002036.1 Protein Homology CDS 2019 2198 . - 0 ID=cds-TGD60012.1;Parent=gene-C9F07_19680;Dbxref=NCBI_GP:TGD60012.1;Name=TGD60012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004590491.1;locus_tag=C9F07_19680;product=hypothetical protein;protein_id=TGD60012.1;transl_table=11 PYKI01002036.1 Genbank gene 2277 2417 . - . ID=gene-C9F07_19685;Name=C9F07_19685;end_range=2417,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19685;partial=true PYKI01002036.1 Protein Homology CDS 2277 2417 . - 0 ID=cds-TGD60013.1;Parent=gene-C9F07_19685;Dbxref=NCBI_GP:TGD60013.1;Name=TGD60013.1;end_range=2417,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457196.1;locus_tag=C9F07_19685;partial=true;product=hypothetical protein;protein_id=TGD60013.1;transl_table=11 ##sequence-region PYKI01001571.1 1 2406 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001571.1 Genbank region 1 2406 . + . ID=PYKI01001571.1:1..2406;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001571.1 Genbank gene 1 704 . - . ID=gene-C9F07_15035;Name=C9F07_15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15035;partial=true;start_range=.,1 PYKI01001571.1 Protein Homology CDS 1 704 . - 0 ID=cds-TGD73271.1;Parent=gene-C9F07_15035;Dbxref=NCBI_GP:TGD73271.1;Name=TGD73271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=C9F07_15035;partial=true;product=enterochelin esterase;protein_id=TGD73271.1;start_range=.,1;transl_table=11 PYKI01001571.1 Genbank gene 893 2406 . + . ID=gene-C9F07_15040;Name=C9F07_15040;end_range=2406,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15040;partial=true PYKI01001571.1 Protein Homology CDS 893 2406 . + 0 ID=cds-TGD73272.1;Parent=gene-C9F07_15040;Dbxref=NCBI_GP:TGD73272.1;Name=TGD73272.1;Note=Fep%3B Cbt%3B Cbr%3B FeuB%3B FepA%3B PfeA%3B IroN%3B BfeA%3B outer membrane receptor of ferric enterobactin and colicins B and D%3B interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space;end_range=2406,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455162.1;locus_tag=C9F07_15040;partial=true;product=TonB-dependent siderophore receptor;protein_id=TGD73272.1;transl_table=11 ##sequence-region PYKI01003554.1 1 2396 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003554.1 Genbank region 1 2396 . + . ID=PYKI01003554.1:1..2396;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003554.1 Genbank gene 1 152 . - . ID=gene-C9F07_35880;Name=C9F07_35880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35880;partial=true;start_range=.,1 PYKI01003554.1 Protein Homology CDS 1 152 . - 0 ID=cds-TGD30704.1;Parent=gene-C9F07_35880;Dbxref=NCBI_GP:TGD30704.1;Name=TGD30704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455413.1;locus_tag=C9F07_35880;partial=true;product=sulfatase;protein_id=TGD30704.1;start_range=.,1;transl_table=11 PYKI01003554.1 Genbank gene 162 482 . - . ID=gene-C9F07_35885;Name=C9F07_35885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35885 PYKI01003554.1 Protein Homology CDS 162 482 . - 0 ID=cds-TGD30705.1;Parent=gene-C9F07_35885;Dbxref=NCBI_GP:TGD30705.1;Name=TGD30705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=C9F07_35885;product=PTS sugar transporter IIB;protein_id=TGD30705.1;transl_table=11 PYKI01003554.1 Genbank pseudogene 512 1855 . - . ID=gene-C9F07_35890;Name=C9F07_35890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35890;pseudo=true PYKI01003554.1 Protein Homology CDS 512 1855 . - 0 ID=cds-C9F07_35890;Parent=gene-C9F07_35890;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455411.1;locus_tag=C9F07_35890;product=PTS ascorbate transporter subunit IIC;pseudo=true;transl_table=11 PYKI01003554.1 Genbank gene 2150 2396 . - . ID=gene-C9F07_35895;Name=rumB;end_range=2396,.;gbkey=Gene;gene=rumB;gene_biotype=protein_coding;locus_tag=C9F07_35895;partial=true PYKI01003554.1 Protein Homology CDS 2150 2396 . - 1 ID=cds-TGD30706.1;Parent=gene-C9F07_35895;Dbxref=NCBI_GP:TGD30706.1;Name=TGD30706.1;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;end_range=2396,.;gbkey=CDS;gene=rumB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455409.1;locus_tag=C9F07_35895;partial=true;product=23S rRNA (uracil(747)-C(5))-methyltransferase;protein_id=TGD30706.1;transl_table=11 ##sequence-region PYKI01001251.1 1 5329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001251.1 Genbank region 1 5329 . + . ID=PYKI01001251.1:1..5329;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001251.1 Genbank gene 191 916 . - . ID=gene-C9F07_11655;Name=C9F07_11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11655 PYKI01001251.1 Protein Homology CDS 191 916 . - 0 ID=cds-TGD89605.1;Parent=gene-C9F07_11655;Dbxref=NCBI_GP:TGD89605.1;Name=TGD89605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457585.1;locus_tag=C9F07_11655;product=protein-disulfide oxidoreductase DsbI;protein_id=TGD89605.1;transl_table=11 PYKI01001251.1 Genbank gene 882 1553 . - . ID=gene-C9F07_11660;Name=C9F07_11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11660 PYKI01001251.1 Protein Homology CDS 882 1553 . - 0 ID=cds-TGD89601.1;Parent=gene-C9F07_11660;Dbxref=NCBI_GP:TGD89601.1;Name=TGD89601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=C9F07_11660;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=TGD89601.1;transl_table=11 PYKI01001251.1 Genbank gene 1573 3369 . - . ID=gene-C9F07_11665;Name=C9F07_11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11665 PYKI01001251.1 Protein Homology CDS 1573 3369 . - 0 ID=cds-TGD89602.1;Parent=gene-C9F07_11665;Dbxref=NCBI_GP:TGD89602.1;Name=TGD89602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457583.1;locus_tag=C9F07_11665;product=aryl-sulfate sulfotransferase;protein_id=TGD89602.1;transl_table=11 PYKI01001251.1 Genbank gene 3769 3945 . + . ID=gene-C9F07_11670;Name=C9F07_11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11670 PYKI01001251.1 Protein Homology CDS 3769 3945 . + 0 ID=cds-TGD89603.1;Parent=gene-C9F07_11670;Dbxref=NCBI_GP:TGD89603.1;Name=TGD89603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991996.1;locus_tag=C9F07_11670;product=DUF4051 domain-containing protein;protein_id=TGD89603.1;transl_table=11 PYKI01001251.1 Genbank gene 4012 4785 . - . ID=gene-C9F07_11675;Name=C9F07_11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11675 PYKI01001251.1 Protein Homology CDS 4012 4785 . - 0 ID=cds-TGD89604.1;Parent=gene-C9F07_11675;Dbxref=NCBI_GP:TGD89604.1;Name=TGD89604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457582.1;locus_tag=C9F07_11675;product=zinc transporter ZupT;protein_id=TGD89604.1;transl_table=11 PYKI01001251.1 Genbank gene 4884 5329 . + . ID=gene-C9F07_11680;Name=C9F07_11680;end_range=5329,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11680;partial=true PYKI01001251.1 Protein Homology CDS 4884 5329 . + 0 ID=cds-TGD89606.1;Parent=gene-C9F07_11680;Dbxref=NCBI_GP:TGD89606.1;Name=TGD89606.1;Note=seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine;end_range=5329,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457581.1;locus_tag=C9F07_11680;partial=true;product=4%2C5-DOPA dioxygenase extradiol;protein_id=TGD89606.1;transl_table=11 ##sequence-region PYKI01002135.1 1 2393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002135.1 Genbank region 1 2393 . + . ID=PYKI01002135.1:1..2393;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002135.1 Genbank gene 1 200 . - . ID=gene-C9F07_20665;Name=C9F07_20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20665;partial=true;start_range=.,1 PYKI01002135.1 Protein Homology CDS 1 200 . - 0 ID=cds-TGD57831.1;Parent=gene-C9F07_20665;Dbxref=NCBI_GP:TGD57831.1;Name=TGD57831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=C9F07_20665;partial=true;product=hypothetical protein;protein_id=TGD57831.1;start_range=.,1;transl_table=11 PYKI01002135.1 Genbank gene 358 501 . + . ID=gene-C9F07_20670;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=C9F07_20670 PYKI01002135.1 Protein Homology CDS 358 501 . + 0 ID=cds-TGD57832.1;Parent=gene-C9F07_20670;Dbxref=NCBI_GP:TGD57832.1;Name=TGD57832.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456346.1;locus_tag=C9F07_20670;product=PhoP/PhoQ regulator MgrB;protein_id=TGD57832.1;transl_table=11 PYKI01002135.1 Genbank gene 572 859 . + . ID=gene-C9F07_20675;Name=C9F07_20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20675 PYKI01002135.1 Protein Homology CDS 572 859 . + 0 ID=cds-TGD57833.1;Parent=gene-C9F07_20675;Dbxref=NCBI_GP:TGD57833.1;Name=TGD57833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456345.1;locus_tag=C9F07_20675;product=hypothetical protein;protein_id=TGD57833.1;transl_table=11 PYKI01002135.1 Genbank gene 1508 1651 . + . ID=gene-C9F07_20680;Name=C9F07_20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20680 PYKI01002135.1 Protein Homology CDS 1508 1651 . + 0 ID=cds-TGD57834.1;Parent=gene-C9F07_20680;Dbxref=NCBI_GP:TGD57834.1;Name=TGD57834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=C9F07_20680;product=DUF2627 domain-containing protein;protein_id=TGD57834.1;transl_table=11 PYKI01002135.1 Genbank gene 1664 1873 . + . ID=gene-C9F07_20685;Name=C9F07_20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20685 PYKI01002135.1 Protein Homology CDS 1664 1873 . + 0 ID=cds-TGD57835.1;Parent=gene-C9F07_20685;Dbxref=NCBI_GP:TGD57835.1;Name=TGD57835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=C9F07_20685;product=cold-shock protein CspC;protein_id=TGD57835.1;transl_table=11 PYKI01002135.1 Genbank gene 2093 2393 . + . ID=gene-C9F07_20690;Name=C9F07_20690;end_range=2393,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20690;partial=true PYKI01002135.1 Protein Homology CDS 2093 2393 . + 0 ID=cds-TGD57836.1;Parent=gene-C9F07_20690;Dbxref=NCBI_GP:TGD57836.1;Name=TGD57836.1;end_range=2393,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456342.1;locus_tag=C9F07_20690;partial=true;product=peptidoglycan synthase;protein_id=TGD57836.1;transl_table=11 ##sequence-region PYKI01002293.1 1 2387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002293.1 Genbank region 1 2387 . + . ID=PYKI01002293.1:1..2387;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002293.1 Genbank gene 1 119 . - . ID=gene-C9F07_22500;Name=C9F07_22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22500;partial=true;start_range=.,1 PYKI01002293.1 Protein Homology CDS 1 119 . - 0 ID=cds-TGD54668.1;Parent=gene-C9F07_22500;Dbxref=NCBI_GP:TGD54668.1;Name=TGD54668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455403.1;locus_tag=C9F07_22500;partial=true;product=YbjN domain-containing protein;protein_id=TGD54668.1;start_range=.,1;transl_table=11 PYKI01002293.1 Genbank gene 215 1117 . - . ID=gene-C9F07_22505;Name=C9F07_22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22505 PYKI01002293.1 Protein Homology CDS 215 1117 . - 0 ID=cds-TGD54665.1;Parent=gene-C9F07_22505;Dbxref=NCBI_GP:TGD54665.1;Name=TGD54665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455402.1;locus_tag=C9F07_22505;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=TGD54665.1;transl_table=11 PYKI01002293.1 Genbank gene 1175 1897 . - . ID=gene-C9F07_22510;Name=C9F07_22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22510 PYKI01002293.1 Protein Homology CDS 1175 1897 . - 0 ID=cds-TGD54666.1;Parent=gene-C9F07_22510;Dbxref=NCBI_GP:TGD54666.1;Name=TGD54666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=C9F07_22510;product=oxygen-insensitive NADPH nitroreductase;protein_id=TGD54666.1;transl_table=11 PYKI01002293.1 Genbank gene 1881 2171 . - . ID=gene-C9F07_22515;Name=C9F07_22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22515 PYKI01002293.1 Protein Homology CDS 1881 2171 . - 0 ID=cds-TGD54667.1;Parent=gene-C9F07_22515;Dbxref=NCBI_GP:TGD54667.1;Name=TGD54667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=C9F07_22515;product=hypothetical protein;protein_id=TGD54667.1;transl_table=11 ##sequence-region PYKI01001396.1 1 2381 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001396.1 Genbank region 1 2381 . + . ID=PYKI01001396.1:1..2381;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001396.1 Genbank gene 1 88 . - . ID=gene-C9F07_13205;Name=C9F07_13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13205;partial=true;start_range=.,1 PYKI01001396.1 Protein Homology CDS 1 88 . - 0 ID=cds-TGD84048.1;Parent=gene-C9F07_13205;Dbxref=NCBI_GP:TGD84048.1;Name=TGD84048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455037.1;locus_tag=C9F07_13205;partial=true;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=TGD84048.1;start_range=.,1;transl_table=11 PYKI01001396.1 Genbank gene 88 702 . - . ID=gene-C9F07_13210;Name=C9F07_13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13210 PYKI01001396.1 Protein Homology CDS 88 702 . - 0 ID=cds-TGD84049.1;Parent=gene-C9F07_13210;Dbxref=NCBI_GP:TGD84049.1;Name=TGD84049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=C9F07_13210;product=cytochrome o ubiquinol oxidase subunit III;protein_id=TGD84049.1;transl_table=11 PYKI01001396.1 Genbank pseudogene 692 2381 . - . ID=gene-C9F07_13215;Name=C9F07_13215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13215;pseudo=true PYKI01001396.1 Protein Homology CDS 692 2381 . - 1 ID=cds-C9F07_13215;Parent=gene-C9F07_13215;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455039.1;locus_tag=C9F07_13215;product=cytochrome o ubiquinol oxidase subunit I;pseudo=true;transl_table=11 ##sequence-region PYKI01002674.1 1 2380 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002674.1 Genbank region 1 2380 . + . ID=PYKI01002674.1:1..2380;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002674.1 Genbank pseudogene 1 634 . + . ID=gene-C9F07_26645;Name=C9F07_26645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26645;pseudo=true PYKI01002674.1 Protein Homology CDS 1 634 . + 1 ID=cds-C9F07_26645;Parent=gene-C9F07_26645;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=C9F07_26645;product=chromosome partition protein MukB;pseudo=true;transl_table=11 PYKI01002674.1 Genbank gene 979 2380 . + . ID=gene-C9F07_26650;Name=C9F07_26650;end_range=2380,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26650;partial=true PYKI01002674.1 Protein Homology CDS 979 2380 . + 0 ID=cds-TGD48818.1;Parent=gene-C9F07_26650;Dbxref=NCBI_GP:TGD48818.1;Name=TGD48818.1;end_range=2380,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=C9F07_26650;partial=true;product=L%2CD-transpeptidase;protein_id=TGD48818.1;transl_table=11 ##sequence-region PYKI01002639.1 1 2379 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002639.1 Genbank region 1 2379 . + . ID=PYKI01002639.1:1..2379;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002639.1 Genbank gene 1 937 . - . ID=gene-C9F07_26280;Name=C9F07_26280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26280;partial=true;start_range=.,1 PYKI01002639.1 Protein Homology CDS 1 937 . - 0 ID=cds-TGD49406.1;Parent=gene-C9F07_26280;Dbxref=NCBI_GP:TGD49406.1;Name=TGD49406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001206792.1;locus_tag=C9F07_26280;partial=true;product=oligosaccharide repeat unit polymerase;protein_id=TGD49406.1;start_range=.,1;transl_table=11 PYKI01002639.1 Genbank gene 1089 2324 . - . ID=gene-C9F07_26285;Name=C9F07_26285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26285 PYKI01002639.1 Protein Homology CDS 1089 2324 . - 0 ID=cds-TGD49407.1;Parent=gene-C9F07_26285;Dbxref=NCBI_GP:TGD49407.1;Name=TGD49407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000415398.1;locus_tag=C9F07_26285;product=polysaccharide biosynthesis family protein;protein_id=TGD49407.1;transl_table=11 ##sequence-region PYKI01002591.1 1 2378 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002591.1 Genbank region 1 2378 . + . ID=PYKI01002591.1:1..2378;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002591.1 Genbank gene 1 753 . + . ID=gene-C9F07_25710;Name=C9F07_25710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25710;partial=true;start_range=.,1 PYKI01002591.1 Protein Homology CDS 1 753 . + 0 ID=cds-TGD49678.1;Parent=gene-C9F07_25710;Dbxref=NCBI_GP:TGD49678.1;Name=TGD49678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=C9F07_25710;partial=true;product=UDP-N-acetylmuramate dehydrogenase;protein_id=TGD49678.1;start_range=.,1;transl_table=11 PYKI01002591.1 Genbank gene 750 1712 . + . ID=gene-C9F07_25715;Name=C9F07_25715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25715 PYKI01002591.1 Protein Homology CDS 750 1712 . + 0 ID=cds-TGD49679.1;Parent=gene-C9F07_25715;Dbxref=NCBI_GP:TGD49679.1;Name=TGD49679.1;Note=catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457927.1;locus_tag=C9F07_25715;product=biotin--[acetyl-CoA-carboxylase] synthetase;protein_id=TGD49679.1;transl_table=11 PYKI01002591.1 Genbank gene 1747 2378 . - . ID=gene-C9F07_25720;Name=coaA;end_range=2378,.;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=C9F07_25720;partial=true PYKI01002591.1 Protein Homology CDS 1747 2378 . - 2 ID=cds-TGD49680.1;Parent=gene-C9F07_25720;Dbxref=NCBI_GP:TGD49680.1;Name=TGD49680.1;end_range=2378,.;gbkey=CDS;gene=coaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457926.1;locus_tag=C9F07_25720;partial=true;product=type I pantothenate kinase;protein_id=TGD49680.1;transl_table=11 ##sequence-region PYKI01001546.1 1 2373 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001546.1 Genbank region 1 2373 . + . ID=PYKI01001546.1:1..2373;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001546.1 Genbank gene 1 823 . + . ID=gene-C9F07_14805;Name=C9F07_14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14805;partial=true;start_range=.,1 PYKI01001546.1 Protein Homology CDS 1 823 . + 1 ID=cds-TGD74987.1;Parent=gene-C9F07_14805;Dbxref=NCBI_GP:TGD74987.1;Name=TGD74987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458091.1;locus_tag=C9F07_14805;partial=true;product=phosphate ABC transporter permease PtsA;protein_id=TGD74987.1;start_range=.,1;transl_table=11 PYKI01001546.1 Genbank gene 934 1707 . + . ID=gene-C9F07_14810;Name=C9F07_14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14810 PYKI01001546.1 Protein Homology CDS 934 1707 . + 0 ID=cds-TGD74988.1;Parent=gene-C9F07_14810;Dbxref=NCBI_GP:TGD74988.1;Name=TGD74988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=C9F07_14810;product=phosphate ABC transporter ATP-binding protein;protein_id=TGD74988.1;transl_table=11 PYKI01001546.1 Genbank gene 1722 2373 . + . ID=gene-C9F07_14815;Name=phoU;end_range=2373,.;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=C9F07_14815;partial=true PYKI01001546.1 Protein Homology CDS 1722 2373 . + 0 ID=cds-TGD74989.1;Parent=gene-C9F07_14815;Dbxref=NCBI_GP:TGD74989.1;Name=TGD74989.1;end_range=2373,.;gbkey=CDS;gene=phoU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435540.1;locus_tag=C9F07_14815;partial=true;product=phosphate transport system regulatory protein PhoU;protein_id=TGD74989.1;transl_table=11 ##sequence-region PYKI01002124.1 1 2373 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002124.1 Genbank region 1 2373 . + . ID=PYKI01002124.1:1..2373;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002124.1 Genbank gene 1 704 . - . ID=gene-C9F07_20550;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=C9F07_20550;partial=true;start_range=.,1 PYKI01002124.1 Protein Homology CDS 1 704 . - 0 ID=cds-TGD58313.1;Parent=gene-C9F07_20550;Dbxref=NCBI_GP:TGD58313.1;Name=TGD58313.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=C9F07_20550;partial=true;product=osmoprotectant ABC transporter permease OsmY;protein_id=TGD58313.1;start_range=.,1;transl_table=11 PYKI01002124.1 Genbank gene 1009 1623 . - . ID=gene-C9F07_20555;Name=C9F07_20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20555 PYKI01002124.1 Protein Homology CDS 1009 1623 . - 0 ID=cds-TGD58314.1;Parent=gene-C9F07_20555;Dbxref=NCBI_GP:TGD58314.1;Name=TGD58314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=C9F07_20555;product=Tat proofreading chaperone DmsD;protein_id=TGD58314.1;transl_table=11 PYKI01002124.1 Genbank gene 1666 2373 . - . ID=gene-C9F07_20560;Name=C9F07_20560;end_range=2373,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20560;partial=true PYKI01002124.1 Protein Homology CDS 1666 2373 . - 0 ID=cds-TGD58315.1;Parent=gene-C9F07_20560;Dbxref=NCBI_GP:TGD58315.1;Name=TGD58315.1;end_range=2373,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=C9F07_20560;partial=true;product=dimethylsulfoxide reductase;protein_id=TGD58315.1;transl_table=11 ##sequence-region PYKI01001330.1 1 2371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001330.1 Genbank region 1 2371 . + . ID=PYKI01001330.1:1..2371;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001330.1 Genbank gene 1 1921 . - . ID=gene-C9F07_12435;Name=C9F07_12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12435;partial=true;start_range=.,1 PYKI01001330.1 Protein Homology CDS 1 1921 . - 0 ID=cds-TGD85800.1;Parent=gene-C9F07_12435;Dbxref=NCBI_GP:TGD85800.1;Name=TGD85800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454953.1;locus_tag=C9F07_12435;partial=true;product=site-specific DNA-methyltransferase;protein_id=TGD85800.1;start_range=.,1;transl_table=11 PYKI01001330.1 Genbank gene 2110 2371 . - . ID=gene-C9F07_12440;Name=C9F07_12440;end_range=2371,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12440;partial=true PYKI01001330.1 Protein Homology CDS 2110 2371 . - 1 ID=cds-TGD85801.1;Parent=gene-C9F07_12440;Dbxref=NCBI_GP:TGD85801.1;Name=TGD85801.1;end_range=2371,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454952.1;locus_tag=C9F07_12440;partial=true;product=MFS transporter;protein_id=TGD85801.1;transl_table=11 ##sequence-region PYKI01001457.1 1 2370 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001457.1 Genbank region 1 2370 . + . ID=PYKI01001457.1:1..2370;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001457.1 Genbank gene 1 468 . + . ID=gene-C9F07_13830;Name=C9F07_13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13830;partial=true;start_range=.,1 PYKI01001457.1 Protein Homology CDS 1 468 . + 0 ID=cds-TGD82205.1;Parent=gene-C9F07_13830;Dbxref=NCBI_GP:TGD82205.1;Name=TGD82205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458056.1;locus_tag=C9F07_13830;partial=true;product=GntR family transcriptional regulator;protein_id=TGD82205.1;start_range=.,1;transl_table=11 PYKI01001457.1 Genbank gene 480 1907 . + . ID=gene-C9F07_13835;Name=C9F07_13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13835 PYKI01001457.1 Protein Homology CDS 480 1907 . + 0 ID=cds-TGD82206.1;Parent=gene-C9F07_13835;Dbxref=NCBI_GP:TGD82206.1;Name=TGD82206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=C9F07_13835;product=MFS transporter;protein_id=TGD82206.1;transl_table=11 PYKI01001457.1 Genbank gene 1873 2370 . - . ID=gene-C9F07_13840;Name=C9F07_13840;end_range=2370,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13840;partial=true PYKI01001457.1 Protein Homology CDS 1873 2370 . - 0 ID=cds-TGD82207.1;Parent=gene-C9F07_13840;Dbxref=NCBI_GP:TGD82207.1;Name=TGD82207.1;end_range=2370,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458057.1;locus_tag=C9F07_13840;partial=true;product=hypothetical protein;protein_id=TGD82207.1;transl_table=11 ##sequence-region PYKI01002782.1 1 5256 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002782.1 Genbank region 1 5256 . + . ID=PYKI01002782.1:1..5256;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002782.1 Genbank gene 1 532 . + . ID=gene-C9F07_27785;Name=C9F07_27785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27785;partial=true;start_range=.,1 PYKI01002782.1 Protein Homology CDS 1 532 . + 1 ID=cds-TGD46236.1;Parent=gene-C9F07_27785;Dbxref=NCBI_GP:TGD46236.1;Name=TGD46236.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456629.1;locus_tag=C9F07_27785;partial=true;product=phosphogluconate dehydrogenase (NADP(+)-dependent%2C decarboxylating);protein_id=TGD46236.1;start_range=.,1;transl_table=11 PYKI01002782.1 Genbank pseudogene 520 707 . + . ID=gene-C9F07_27790;Name=C9F07_27790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27790;pseudo=true PYKI01002782.1 Protein Homology CDS 520 707 . + 0 ID=cds-C9F07_27790;Parent=gene-C9F07_27790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000232814.1;locus_tag=C9F07_27790;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002782.1 Genbank pseudogene 768 1934 . + . ID=gene-C9F07_27795;Name=C9F07_27795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27795;pseudo=true PYKI01002782.1 Protein Homology CDS 768 1934 . + 0 ID=cds-C9F07_27795;Parent=gene-C9F07_27795;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=C9F07_27795;product=UDP-glucose 6-dehydrogenase;pseudo=true;transl_table=11 PYKI01002782.1 Genbank gene 2077 3060 . + . ID=gene-C9F07_27800;Name=C9F07_27800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27800 PYKI01002782.1 Protein Homology CDS 2077 3060 . + 0 ID=cds-TGD46237.1;Parent=gene-C9F07_27800;Dbxref=NCBI_GP:TGD46237.1;Name=TGD46237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=C9F07_27800;product=LPS O-antigen chain length determinant protein WzzB;protein_id=TGD46237.1;transl_table=11 PYKI01002782.1 Genbank gene 3142 3753 . - . ID=gene-C9F07_27805;Name=C9F07_27805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27805 PYKI01002782.1 Protein Homology CDS 3142 3753 . - 0 ID=cds-TGD46238.1;Parent=gene-C9F07_27805;Dbxref=NCBI_GP:TGD46238.1;Name=TGD46238.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=C9F07_27805;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase;protein_id=TGD46238.1;transl_table=11 PYKI01002782.1 Genbank gene 3747 4523 . - . ID=gene-C9F07_27810;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=C9F07_27810 PYKI01002782.1 Protein Homology CDS 3747 4523 . - 0 ID=cds-TGD46239.1;Parent=gene-C9F07_27810;Dbxref=NCBI_GP:TGD46239.1;Name=TGD46239.1;gbkey=CDS;gene=hisF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456625.1;locus_tag=C9F07_27810;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=TGD46239.1;transl_table=11 PYKI01002782.1 Genbank gene 4505 5242 . - . ID=gene-C9F07_27815;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=C9F07_27815 PYKI01002782.1 Protein Homology CDS 4505 5242 . - 0 ID=cds-TGD46240.1;Parent=gene-C9F07_27815;Dbxref=NCBI_GP:TGD46240.1;Name=TGD46240.1;gbkey=CDS;gene=hisA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=C9F07_27815;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=TGD46240.1;transl_table=11 ##sequence-region PYKI01001357.1 1 2370 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001357.1 Genbank region 1 2370 . + . ID=PYKI01001357.1:1..2370;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001357.1 Genbank gene 1 380 . + . ID=gene-C9F07_12745;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=C9F07_12745;partial=true;start_range=.,1 PYKI01001357.1 Protein Homology CDS 1 380 . + 2 ID=cds-TGD85058.1;Parent=gene-C9F07_12745;Dbxref=NCBI_GP:TGD85058.1;Name=TGD85058.1;Note=catalyzes the uptake of putrescine via a proton symport mechanism%2C as well as the efflux of putrescine by a putrescine/ornithine antiport system;gbkey=CDS;gene=potE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=C9F07_12745;partial=true;product=putrescine-ornithine antiporter;protein_id=TGD85058.1;start_range=.,1;transl_table=11 PYKI01001357.1 Genbank gene 445 930 . + . ID=gene-C9F07_12750;Name=C9F07_12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12750 PYKI01001357.1 Protein Homology CDS 445 930 . + 0 ID=cds-TGD85059.1;Parent=gene-C9F07_12750;Dbxref=NCBI_GP:TGD85059.1;Name=TGD85059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=C9F07_12750;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=TGD85059.1;transl_table=11 PYKI01001357.1 Genbank gene 1045 2370 . - . ID=gene-C9F07_12755;Name=C9F07_12755;end_range=2370,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12755;partial=true PYKI01001357.1 Protein Homology CDS 1045 2370 . - 0 ID=cds-TGD85060.1;Parent=gene-C9F07_12755;Dbxref=NCBI_GP:TGD85060.1;Name=TGD85060.1;Note=catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate;end_range=2370,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455259.1;locus_tag=C9F07_12755;partial=true;product=phosphoglucomutase%2C alpha-D-glucose phosphate-specific;protein_id=TGD85060.1;transl_table=11 ##sequence-region PYKI01001097.1 1 2370 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001097.1 Genbank region 1 2370 . + . ID=PYKI01001097.1:1..2370;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001097.1 Genbank gene 1 732 . + . ID=gene-C9F07_10230;Name=C9F07_10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10230;partial=true;start_range=.,1 PYKI01001097.1 Protein Homology CDS 1 732 . + 0 ID=cds-TGD95311.1;Parent=gene-C9F07_10230;Dbxref=NCBI_GP:TGD95311.1;Name=TGD95311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=C9F07_10230;partial=true;product=hypothetical protein;protein_id=TGD95311.1;start_range=.,1;transl_table=11 PYKI01001097.1 Genbank gene 772 2370 . + . ID=gene-C9F07_10235;Name=C9F07_10235;end_range=2370,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10235;partial=true PYKI01001097.1 Protein Homology CDS 772 2370 . + 0 ID=cds-TGD95312.1;Parent=gene-C9F07_10235;Dbxref=NCBI_GP:TGD95312.1;Name=TGD95312.1;end_range=2370,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=C9F07_10235;partial=true;product=family 31 glucosidase;protein_id=TGD95312.1;transl_table=11 ##sequence-region PYKI01002323.1 1 2368 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002323.1 Genbank region 1 2368 . + . ID=PYKI01002323.1:1..2368;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002323.1 Genbank gene 1 249 . + . ID=gene-C9F07_22780;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=C9F07_22780;partial=true;start_range=.,1 PYKI01002323.1 Protein Homology CDS 1 249 . + 0 ID=cds-TGD53976.1;Parent=gene-C9F07_22780;Dbxref=NCBI_GP:TGD53976.1;Name=TGD53976.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=C9F07_22780;partial=true;product=phosphoglycerate kinase;protein_id=TGD53976.1;start_range=.,1;transl_table=11 PYKI01002323.1 Genbank gene 351 1430 . + . ID=gene-C9F07_22785;Name=C9F07_22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22785 PYKI01002323.1 Protein Homology CDS 351 1430 . + 0 ID=cds-TGD53977.1;Parent=gene-C9F07_22785;Dbxref=NCBI_GP:TGD53977.1;Name=TGD53977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=C9F07_22785;product=class II fructose-bisphosphate aldolase;protein_id=TGD53977.1;transl_table=11 PYKI01002323.1 Genbank gene 1653 2368 . + . ID=gene-C9F07_22790;Name=C9F07_22790;end_range=2368,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22790;partial=true PYKI01002323.1 Protein Homology CDS 1653 2368 . + 0 ID=cds-TGD53978.1;Parent=gene-C9F07_22790;Dbxref=NCBI_GP:TGD53978.1;Name=TGD53978.1;Note=participates in the regulation of osmotic pressure changes within the cel;end_range=2368,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457465.1;locus_tag=C9F07_22790;partial=true;product=mechanosensitive ion channel protein MscS;protein_id=TGD53978.1;transl_table=11 ##sequence-region PYKI01001103.1 1 2367 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001103.1 Genbank region 1 2367 . + . ID=PYKI01001103.1:1..2367;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001103.1 Genbank gene 216 1883 . - . ID=gene-C9F07_10295;Name=C9F07_10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10295 PYKI01001103.1 Protein Homology CDS 216 1883 . - 0 ID=cds-TGD95219.1;Parent=gene-C9F07_10295;Dbxref=NCBI_GP:TGD95219.1;Name=TGD95219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=C9F07_10295;product=glutamine--tRNA ligase;protein_id=TGD95219.1;transl_table=11 PYKI01001103.1 Genbank pseudogene 2094 2324 . - . ID=gene-C9F07_10300;Name=C9F07_10300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10300;pseudo=true PYKI01001103.1 Protein Homology CDS 2094 2324 . - 0 ID=cds-C9F07_10300;Parent=gene-C9F07_10300;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455246.1;locus_tag=C9F07_10300;product=PTS N-acetyl glucosamine transporter subunit IIABC;pseudo=true;transl_table=11 ##sequence-region PYKI01000318.1 1 2367 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000318.1 Genbank region 1 2367 . + . ID=PYKI01000318.1:1..2367;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000318.1 Genbank gene 1 135 . + . ID=gene-C9F07_02180;Name=C9F07_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02180;partial=true;start_range=.,1 PYKI01000318.1 Protein Homology CDS 1 135 . + 0 ID=cds-TGE26885.1;Parent=gene-C9F07_02180;Dbxref=NCBI_GP:TGE26885.1;Name=TGE26885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001228703.1;locus_tag=C9F07_02180;partial=true;product=hypothetical protein;protein_id=TGE26885.1;start_range=.,1;transl_table=11 PYKI01000318.1 Genbank gene 356 859 . + . ID=gene-C9F07_02185;Name=C9F07_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02185 PYKI01000318.1 Protein Homology CDS 356 859 . + 0 ID=cds-TGE26886.1;Parent=gene-C9F07_02185;Dbxref=NCBI_GP:TGE26886.1;Name=TGE26886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252716.1;locus_tag=C9F07_02185;product=hypothetical protein;protein_id=TGE26886.1;transl_table=11 PYKI01000318.1 Genbank gene 927 1271 . + . ID=gene-C9F07_02190;Name=C9F07_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02190 PYKI01000318.1 Protein Homology CDS 927 1271 . + 0 ID=cds-TGE26887.1;Parent=gene-C9F07_02190;Dbxref=NCBI_GP:TGE26887.1;Name=TGE26887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440812.1;locus_tag=C9F07_02190;product=HNH endonuclease;protein_id=TGE26887.1;transl_table=11 PYKI01000318.1 Genbank gene 1404 1868 . + . ID=gene-C9F07_02195;Name=C9F07_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02195 PYKI01000318.1 Protein Homology CDS 1404 1868 . + 0 ID=cds-TGE26888.1;Parent=gene-C9F07_02195;Dbxref=NCBI_GP:TGE26888.1;Name=TGE26888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628364.1;locus_tag=C9F07_02195;product=phage terminase small subunit P27 family;protein_id=TGE26888.1;transl_table=11 PYKI01000318.1 Genbank pseudogene 1822 2298 . + . ID=gene-C9F07_02200;Name=C9F07_02200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02200;pseudo=true PYKI01000318.1 Protein Homology CDS 1822 2298 . + 0 ID=cds-C9F07_02200;Parent=gene-C9F07_02200;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628363.1;locus_tag=C9F07_02200;product=phage terminase small subunit P27 family;pseudo=true;transl_table=11 ##sequence-region PYKI01000926.1 1 2366 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000926.1 Genbank region 1 2366 . + . ID=PYKI01000926.1:1..2366;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000926.1 Genbank gene 1 337 . + . ID=gene-C9F07_08445;Name=C9F07_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08445;partial=true;start_range=.,1 PYKI01000926.1 Protein Homology CDS 1 337 . + 1 ID=cds-TGE02821.1;Parent=gene-C9F07_08445;Dbxref=NCBI_GP:TGE02821.1;Name=TGE02821.1;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455293.1;locus_tag=C9F07_08445;partial=true;product=dihydrolipoamide succinyltransferase;protein_id=TGE02821.1;start_range=.,1;transl_table=11 PYKI01000926.1 Genbank gene 479 1645 . + . ID=gene-C9F07_08450;Name=C9F07_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08450 PYKI01000926.1 Protein Homology CDS 479 1645 . + 0 ID=cds-TGE02822.1;Parent=gene-C9F07_08450;Dbxref=NCBI_GP:TGE02822.1;Name=TGE02822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=C9F07_08450;product=succinyl-CoA ligase subunit beta;protein_id=TGE02822.1;transl_table=11 PYKI01000926.1 Genbank pseudogene 1645 2313 . + . ID=gene-C9F07_08455;Name=C9F07_08455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08455;pseudo=true PYKI01000926.1 Protein Homology CDS 1645 2313 . + 0 ID=cds-C9F07_08455;Parent=gene-C9F07_08455;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=C9F07_08455;product=succinate--CoA ligase subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKI01003008.1 1 2363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003008.1 Genbank region 1 2363 . + . ID=PYKI01003008.1:1..2363;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003008.1 Genbank gene 1 1021 . - . ID=gene-C9F07_30140;Name=C9F07_30140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30140;partial=true;start_range=.,1 PYKI01003008.1 Protein Homology CDS 1 1021 . - 0 ID=cds-TGD41206.1;Parent=gene-C9F07_30140;Dbxref=NCBI_GP:TGD41206.1;Name=TGD41206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455627.1;locus_tag=C9F07_30140;partial=true;product=MFS transporter;protein_id=TGD41206.1;start_range=.,1;transl_table=11 PYKI01003008.1 Genbank gene 1303 1995 . - . ID=gene-C9F07_30145;Name=C9F07_30145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30145 PYKI01003008.1 Protein Homology CDS 1303 1995 . - 0 ID=cds-TGD41207.1;Parent=gene-C9F07_30145;Dbxref=NCBI_GP:TGD41207.1;Name=TGD41207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455626.1;locus_tag=C9F07_30145;product=hypothetical protein;protein_id=TGD41207.1;transl_table=11 PYKI01003008.1 Genbank gene 2040 2363 . - . ID=gene-C9F07_30150;Name=C9F07_30150;end_range=2363,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30150;partial=true PYKI01003008.1 Protein Homology CDS 2040 2363 . - 0 ID=cds-TGD41208.1;Parent=gene-C9F07_30150;Dbxref=NCBI_GP:TGD41208.1;Name=TGD41208.1;end_range=2363,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455625.1;locus_tag=C9F07_30150;partial=true;product=N-acetylneuraminic acid mutarotase;protein_id=TGD41208.1;transl_table=11 ##sequence-region PYKI01000596.1 1 2362 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000596.1 Genbank region 1 2362 . + . ID=PYKI01000596.1:1..2362;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000596.1 Genbank gene 1 1171 . - . ID=gene-C9F07_05085;Name=C9F07_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05085;partial=true;start_range=.,1 PYKI01000596.1 Protein Homology CDS 1 1171 . - 0 ID=cds-TGE14104.1;Parent=gene-C9F07_05085;Dbxref=NCBI_GP:TGE14104.1;Name=TGE14104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455058.1;locus_tag=C9F07_05085;partial=true;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=TGE14104.1;start_range=.,1;transl_table=11 PYKI01000596.1 Genbank gene 1212 1670 . - . ID=gene-C9F07_05090;Name=C9F07_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05090 PYKI01000596.1 Protein Homology CDS 1212 1670 . - 0 ID=cds-TGE14105.1;Parent=gene-C9F07_05090;Dbxref=NCBI_GP:TGE14105.1;Name=TGE14105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455057.1;locus_tag=C9F07_05090;product=Lrp/AsnC family transcriptional regulator;protein_id=TGE14105.1;transl_table=11 PYKI01000596.1 Genbank gene 1783 2362 . + . ID=gene-C9F07_05095;Name=C9F07_05095;end_range=2362,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05095;partial=true PYKI01000596.1 Protein Homology CDS 1783 2362 . + 0 ID=cds-TGE14106.1;Parent=gene-C9F07_05095;Dbxref=NCBI_GP:TGE14106.1;Name=TGE14106.1;end_range=2362,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=C9F07_05095;partial=true;product=cysteine synthase;protein_id=TGE14106.1;transl_table=11 ##sequence-region PYKI01001873.1 1 2360 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001873.1 Genbank region 1 2360 . + . ID=PYKI01001873.1:1..2360;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001873.1 Genbank pseudogene 64 744 . + . ID=gene-C9F07_18035;Name=C9F07_18035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18035;pseudo=true PYKI01001873.1 Protein Homology CDS 64 744 . + 0 ID=cds-C9F07_18035;Parent=gene-C9F07_18035;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455996.1;locus_tag=C9F07_18035;product=serine protease;pseudo=true;transl_table=11 PYKI01001873.1 Genbank gene 784 1113 . - . ID=gene-C9F07_18040;Name=C9F07_18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18040 PYKI01001873.1 Protein Homology CDS 784 1113 . - 0 ID=cds-TGD62598.1;Parent=gene-C9F07_18040;Dbxref=NCBI_GP:TGD62598.1;Name=TGD62598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455997.1;locus_tag=C9F07_18040;product=spermidine export protein MdtI;protein_id=TGD62598.1;transl_table=11 PYKI01001873.1 Genbank gene 1100 1462 . - . ID=gene-C9F07_18045;Name=C9F07_18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18045 PYKI01001873.1 Protein Homology CDS 1100 1462 . - 0 ID=cds-TGD62599.1;Parent=gene-C9F07_18045;Dbxref=NCBI_GP:TGD62599.1;Name=TGD62599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455998.1;locus_tag=C9F07_18045;product=multidrug transporter subunit MdtJ;protein_id=TGD62599.1;transl_table=11 PYKI01001873.1 Genbank gene 1574 1744 . - . ID=gene-C9F07_18050;Name=C9F07_18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18050 PYKI01001873.1 Protein Homology CDS 1574 1744 . - 0 ID=cds-TGD62600.1;Parent=gene-C9F07_18050;Dbxref=NCBI_GP:TGD62600.1;Name=TGD62600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991983.1;locus_tag=C9F07_18050;product=hypothetical protein;protein_id=TGD62600.1;transl_table=11 PYKI01001873.1 Genbank pseudogene 1880 2344 . + . ID=gene-C9F07_18055;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=pseudogene;gene_synonym=ydgG;locus_tag=C9F07_18055;pseudo=true PYKI01001873.1 Protein Homology CDS 1880 2344 . + 0 ID=cds-C9F07_18055;Parent=gene-C9F07_18055;Note=transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=tqsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019076755.1;locus_tag=C9F07_18055;product=pheromone autoinducer 2 transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01003529.1 1 2359 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003529.1 Genbank region 1 2359 . + . ID=PYKI01003529.1:1..2359;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003529.1 Genbank gene 1 1111 . - . ID=gene-C9F07_35625;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=C9F07_35625;partial=true;start_range=.,1 PYKI01003529.1 Protein Homology CDS 1 1111 . - 0 ID=cds-TGD31362.1;Parent=gene-C9F07_35625;Dbxref=NCBI_GP:TGD31362.1;Name=TGD31362.1;gbkey=CDS;gene=deoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458981.1;locus_tag=C9F07_35625;partial=true;product=phosphopentomutase;protein_id=TGD31362.1;start_range=.,1;transl_table=11 PYKI01003529.1 Genbank gene 1163 2359 . - . ID=gene-C9F07_35630;Name=deoA;end_range=2359,.;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=C9F07_35630;partial=true PYKI01003529.1 Protein Homology CDS 1163 2359 . - 0 ID=cds-TGD31363.1;Parent=gene-C9F07_35630;Dbxref=NCBI_GP:TGD31363.1;Name=TGD31363.1;end_range=2359,.;gbkey=CDS;gene=deoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=C9F07_35630;partial=true;product=thymidine phosphorylase;protein_id=TGD31363.1;transl_table=11 ##sequence-region PYKI01002341.1 1 5186 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002341.1 Genbank region 1 5186 . + . ID=PYKI01002341.1:1..5186;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002341.1 Genbank gene 1 1062 . - . ID=gene-C9F07_22980;Name=C9F07_22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22980;partial=true;start_range=.,1 PYKI01002341.1 Protein Homology CDS 1 1062 . - 0 ID=cds-TGD53519.1;Parent=gene-C9F07_22980;Dbxref=NCBI_GP:TGD53519.1;Name=TGD53519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=C9F07_22980;partial=true;product=sensor histidine kinase;protein_id=TGD53519.1;start_range=.,1;transl_table=11 PYKI01002341.1 Genbank gene 1285 2016 . + . ID=gene-C9F07_22985;Name=C9F07_22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22985 PYKI01002341.1 Protein Homology CDS 1285 2016 . + 0 ID=cds-TGD53513.1;Parent=gene-C9F07_22985;Dbxref=NCBI_GP:TGD53513.1;Name=TGD53513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=C9F07_22985;product=HTH-type transcriptional regulator MlrA;protein_id=TGD53513.1;transl_table=11 PYKI01002341.1 Genbank gene 2076 2183 . + . ID=gene-C9F07_22990;Name=C9F07_22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22990 PYKI01002341.1 Protein Homology CDS 2076 2183 . + 0 ID=cds-TGD53514.1;Parent=gene-C9F07_22990;Dbxref=NCBI_GP:TGD53514.1;Name=TGD53514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456721.1;locus_tag=C9F07_22990;product=hypothetical protein;protein_id=TGD53514.1;transl_table=11 PYKI01002341.1 Genbank gene 2164 2895 . - . ID=gene-C9F07_22995;Name=C9F07_22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22995 PYKI01002341.1 Protein Homology CDS 2164 2895 . - 0 ID=cds-TGD53515.1;Parent=gene-C9F07_22995;Dbxref=NCBI_GP:TGD53515.1;Name=TGD53515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456722.1;locus_tag=C9F07_22995;product=osmoprotectant uptake system permease;protein_id=TGD53515.1;transl_table=11 PYKI01002341.1 Genbank gene 2879 3826 . - . ID=gene-C9F07_23000;Name=C9F07_23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23000 PYKI01002341.1 Protein Homology CDS 2879 3826 . - 0 ID=cds-TGD53516.1;Parent=gene-C9F07_23000;Dbxref=NCBI_GP:TGD53516.1;Name=TGD53516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456723.1;locus_tag=C9F07_23000;product=ATP-binding protein;protein_id=TGD53516.1;transl_table=11 PYKI01002341.1 Genbank gene 3819 4988 . - . ID=gene-C9F07_23005;Name=C9F07_23005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23005 PYKI01002341.1 Protein Homology CDS 3819 4988 . - 0 ID=cds-TGD53517.1;Parent=gene-C9F07_23005;Dbxref=NCBI_GP:TGD53517.1;Name=TGD53517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=C9F07_23005;product=osmoprotectant uptake system permease;protein_id=TGD53517.1;transl_table=11 PYKI01002341.1 Genbank gene 4992 5186 . - . ID=gene-C9F07_23010;Name=C9F07_23010;end_range=5186,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23010;partial=true PYKI01002341.1 Protein Homology CDS 4992 5186 . - 0 ID=cds-TGD53518.1;Parent=gene-C9F07_23010;Dbxref=NCBI_GP:TGD53518.1;Name=TGD53518.1;end_range=5186,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456725.1;locus_tag=C9F07_23010;partial=true;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=TGD53518.1;transl_table=11 ##sequence-region PYKI01001987.1 1 2352 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001987.1 Genbank region 1 2352 . + . ID=PYKI01001987.1:1..2352;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001987.1 Genbank gene 1 437 . - . ID=gene-C9F07_19155;Name=C9F07_19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19155;partial=true;start_range=.,1 PYKI01001987.1 Protein Homology CDS 1 437 . - 0 ID=cds-TGD60217.1;Parent=gene-C9F07_19155;Dbxref=NCBI_GP:TGD60217.1;Name=TGD60217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461630.1;locus_tag=C9F07_19155;partial=true;product=DNA-invertase;protein_id=TGD60217.1;start_range=.,1;transl_table=11 PYKI01001987.1 Genbank gene 467 1456 . + . ID=gene-C9F07_19160;Name=C9F07_19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19160 PYKI01001987.1 Protein Homology CDS 467 1456 . + 0 ID=cds-TGD60215.1;Parent=gene-C9F07_19160;Dbxref=NCBI_GP:TGD60215.1;Name=TGD60215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117079.1;locus_tag=C9F07_19160;product=phage tail protein;protein_id=TGD60215.1;transl_table=11 PYKI01001987.1 Genbank gene 1426 2043 . + . ID=gene-C9F07_19165;Name=C9F07_19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19165 PYKI01001987.1 Protein Homology CDS 1426 2043 . + 0 ID=cds-TGD60216.1;Parent=gene-C9F07_19165;Dbxref=NCBI_GP:TGD60216.1;Name=TGD60216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461633.1;locus_tag=C9F07_19165;product=phage tail protein;protein_id=TGD60216.1;transl_table=11 PYKI01001987.1 Genbank gene 2047 2352 . - . ID=gene-C9F07_19170;Name=C9F07_19170;end_range=2352,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19170;partial=true PYKI01001987.1 Protein Homology CDS 2047 2352 . - 0 ID=cds-TGD60218.1;Parent=gene-C9F07_19170;Dbxref=NCBI_GP:TGD60218.1;Name=TGD60218.1;end_range=2352,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000972188.1;locus_tag=C9F07_19170;partial=true;product=phage tail protein;protein_id=TGD60218.1;transl_table=11 ##sequence-region PYKI01002010.1 1 2349 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002010.1 Genbank region 1 2349 . + . ID=PYKI01002010.1:1..2349;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002010.1 Genbank gene 41 1141 . + . ID=gene-C9F07_19385;Name=C9F07_19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19385 PYKI01002010.1 Protein Homology CDS 41 1141 . + 0 ID=cds-TGD60112.1;Parent=gene-C9F07_19385;Dbxref=NCBI_GP:TGD60112.1;Name=TGD60112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457375.1;locus_tag=C9F07_19385;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=TGD60112.1;transl_table=11 PYKI01002010.1 Genbank gene 1200 1910 . - . ID=gene-C9F07_19390;Name=C9F07_19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19390 PYKI01002010.1 Protein Homology CDS 1200 1910 . - 0 ID=cds-TGD60113.1;Parent=gene-C9F07_19390;Dbxref=NCBI_GP:TGD60113.1;Name=TGD60113.1;Note=regulates expression of genes involved in L-fucose utilization;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457374.1;locus_tag=C9F07_19390;product=transcriptional regulator;protein_id=TGD60113.1;transl_table=11 PYKI01002010.1 Genbank gene 1968 2336 . - . ID=gene-C9F07_19395;Name=C9F07_19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19395 PYKI01002010.1 Protein Homology CDS 1968 2336 . - 0 ID=cds-TGD60114.1;Parent=gene-C9F07_19395;Dbxref=NCBI_GP:TGD60114.1;Name=TGD60114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001453565.1;locus_tag=C9F07_19395;product=L-fucose mutarotase;protein_id=TGD60114.1;transl_table=11 ##sequence-region PYKI01002799.1 1 2347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002799.1 Genbank region 1 2347 . + . ID=PYKI01002799.1:1..2347;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002799.1 Genbank gene 1 1760 . + . ID=gene-C9F07_27980;Name=C9F07_27980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27980;partial=true;start_range=.,1 PYKI01002799.1 Protein Homology CDS 1 1760 . + 2 ID=cds-TGD45908.1;Parent=gene-C9F07_27980;Dbxref=NCBI_GP:TGD45908.1;Name=TGD45908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=C9F07_27980;partial=true;product=exoribonuclease II;protein_id=TGD45908.1;start_range=.,1;transl_table=11 PYKI01002799.1 Genbank gene 1786 2007 . + . ID=gene-C9F07_27985;Name=C9F07_27985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27985 PYKI01002799.1 Protein Homology CDS 1786 2007 . + 0 ID=cds-TGD45909.1;Parent=gene-C9F07_27985;Dbxref=NCBI_GP:TGD45909.1;Name=TGD45909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218763.1;locus_tag=C9F07_27985;product=hypothetical protein;protein_id=TGD45909.1;transl_table=11 PYKI01002799.1 Genbank gene 2022 2347 . + . ID=gene-C9F07_27990;Name=C9F07_27990;end_range=2347,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27990;partial=true PYKI01002799.1 Protein Homology CDS 2022 2347 . + 0 ID=cds-TGD45910.1;Parent=gene-C9F07_27990;Dbxref=NCBI_GP:TGD45910.1;Name=TGD45910.1;Note=c-di-GMP phosphodiesterase%3B probably degrades signalling molecule c-di-GMP;end_range=2347,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455794.1;locus_tag=C9F07_27990;partial=true;product=cyclic di-GMP phosphodiesterase;protein_id=TGD45910.1;transl_table=11 ##sequence-region PYKI01000597.1 1 2346 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000597.1 Genbank region 1 2346 . + . ID=PYKI01000597.1:1..2346;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000597.1 Genbank gene 1 415 . + . ID=gene-C9F07_05100;Name=C9F07_05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05100;partial=true;start_range=.,1 PYKI01000597.1 Protein Homology CDS 1 415 . + 1 ID=cds-TGE14101.1;Parent=gene-C9F07_05100;Dbxref=NCBI_GP:TGE14101.1;Name=TGE14101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455666.1;locus_tag=C9F07_05100;partial=true;product=hypothetical protein;protein_id=TGE14101.1;start_range=.,1;transl_table=11 PYKI01000597.1 Genbank gene 507 800 . + . ID=gene-C9F07_05105;Name=C9F07_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05105 PYKI01000597.1 Protein Homology CDS 507 800 . + 0 ID=cds-TGE14099.1;Parent=gene-C9F07_05105;Dbxref=NCBI_GP:TGE14099.1;Name=TGE14099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=C9F07_05105;product=anti-sigma-28 factor FlgM;protein_id=TGE14099.1;transl_table=11 PYKI01000597.1 Genbank gene 805 1227 . + . ID=gene-C9F07_05110;Name=C9F07_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05110 PYKI01000597.1 Protein Homology CDS 805 1227 . + 0 ID=cds-TGE14100.1;Parent=gene-C9F07_05110;Dbxref=NCBI_GP:TGE14100.1;Name=TGE14100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455664.1;locus_tag=C9F07_05110;product=flagella synthesis protein FlgN;protein_id=TGE14100.1;transl_table=11 PYKI01000597.1 Genbank gene 1309 2346 . - . ID=gene-C9F07_05115;Name=mviN;end_range=2346,.;gbkey=Gene;gene=mviN;gene_biotype=protein_coding;locus_tag=C9F07_05115;partial=true PYKI01000597.1 Protein Homology CDS 1309 2346 . - 0 ID=cds-TGE14102.1;Parent=gene-C9F07_05115;Dbxref=NCBI_GP:TGE14102.1;Name=TGE14102.1;end_range=2346,.;gbkey=CDS;gene=mviN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460141.1;locus_tag=C9F07_05115;partial=true;product=murein biosynthesis integral membrane protein MurJ;protein_id=TGE14102.1;transl_table=11 ##sequence-region PYKI01002052.1 1 2346 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002052.1 Genbank region 1 2346 . + . ID=PYKI01002052.1:1..2346;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002052.1 Genbank gene 1 194 . - . ID=gene-C9F07_19860;Name=C9F07_19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19860;partial=true;start_range=.,1 PYKI01002052.1 Protein Homology CDS 1 194 . - 0 ID=cds-TGD59955.1;Parent=gene-C9F07_19860;Dbxref=NCBI_GP:TGD59955.1;Name=TGD59955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749613.1;locus_tag=C9F07_19860;partial=true;product=hypothetical protein;protein_id=TGD59955.1;start_range=.,1;transl_table=11 PYKI01002052.1 Genbank gene 193 1164 . + . ID=gene-C9F07_19865;Name=msbB;gbkey=Gene;gene=msbB;gene_biotype=protein_coding;locus_tag=C9F07_19865 PYKI01002052.1 Protein Homology CDS 193 1164 . + 0 ID=cds-TGD59954.1;Parent=gene-C9F07_19865;Dbxref=NCBI_GP:TGD59954.1;Name=TGD59954.1;gbkey=CDS;gene=msbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456456.1;locus_tag=C9F07_19865;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=TGD59954.1;transl_table=11 PYKI01002052.1 Genbank pseudogene 1236 2346 . - . ID=gene-C9F07_19870;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=pseudogene;locus_tag=C9F07_19870;pseudo=true PYKI01002052.1 Protein Homology CDS 1236 2346 . - 1 ID=cds-C9F07_19870;Parent=gene-C9F07_19870;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=pyk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=C9F07_19870;product=pyruvate kinase;pseudo=true;transl_table=11 ##sequence-region PYKI01001498.1 1 2343 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001498.1 Genbank region 1 2343 . + . ID=PYKI01001498.1:1..2343;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001498.1 Genbank gene 1 1068 . - . ID=gene-C9F07_14260;Name=C9F07_14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14260;partial=true;start_range=.,1 PYKI01001498.1 Protein Homology CDS 1 1068 . - 0 ID=cds-TGD78125.1;Parent=gene-C9F07_14260;Dbxref=NCBI_GP:TGD78125.1;Name=TGD78125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=C9F07_14260;partial=true;product=NADH-dependent alcohol dehydrogenase;protein_id=TGD78125.1;start_range=.,1;transl_table=11 PYKI01001498.1 Genbank gene 1243 2160 . + . ID=gene-C9F07_14265;Name=C9F07_14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14265 PYKI01001498.1 Protein Homology CDS 1243 2160 . + 0 ID=cds-TGD78126.1;Parent=gene-C9F07_14265;Dbxref=NCBI_GP:TGD78126.1;Name=TGD78126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462078.1;locus_tag=C9F07_14265;product=AraC family transcriptional regulator;protein_id=TGD78126.1;transl_table=11 ##sequence-region PYKI01001263.1 1 2343 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001263.1 Genbank region 1 2343 . + . ID=PYKI01001263.1:1..2343;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001263.1 Genbank gene 104 322 . - . ID=gene-C9F07_11805;Name=C9F07_11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11805 PYKI01001263.1 Protein Homology CDS 104 322 . - 0 ID=cds-TGD88835.1;Parent=gene-C9F07_11805;Dbxref=NCBI_GP:TGD88835.1;Name=TGD88835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=C9F07_11805;product=translation initiation factor IF-1;protein_id=TGD88835.1;transl_table=11 PYKI01001263.1 Genbank gene 250 633 . - . ID=gene-C9F07_11810;Name=C9F07_11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11810 PYKI01001263.1 Protein Homology CDS 250 633 . - 0 ID=cds-TGD88836.1;Parent=gene-C9F07_11810;Dbxref=NCBI_GP:TGD88836.1;Name=TGD88836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459930.1;locus_tag=C9F07_11810;product=hypothetical protein;protein_id=TGD88836.1;transl_table=11 PYKI01001263.1 Genbank gene 634 1338 . - . ID=gene-C9F07_11815;Name=C9F07_11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11815 PYKI01001263.1 Protein Homology CDS 634 1338 . - 0 ID=cds-TGD88837.1;Parent=gene-C9F07_11815;Dbxref=NCBI_GP:TGD88837.1;Name=TGD88837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455443.1;locus_tag=C9F07_11815;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=TGD88837.1;transl_table=11 PYKI01001263.1 Genbank gene 1383 2343 . - . ID=gene-C9F07_11820;Name=cydC;end_range=2343,.;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=C9F07_11820;partial=true PYKI01001263.1 Protein Homology CDS 1383 2343 . - 1 ID=cds-TGD88838.1;Parent=gene-C9F07_11820;Dbxref=NCBI_GP:TGD88838.1;Name=TGD88838.1;end_range=2343,.;gbkey=CDS;gene=cydC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=C9F07_11820;partial=true;product=thiol reductant ABC exporter subunit CydC;protein_id=TGD88838.1;transl_table=11 ##sequence-region PYKI01001587.1 1 2342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001587.1 Genbank region 1 2342 . + . ID=PYKI01001587.1:1..2342;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001587.1 Genbank gene 1 112 . + . ID=gene-C9F07_15165;Name=C9F07_15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15165;partial=true;start_range=.,1 PYKI01001587.1 Protein Homology CDS 1 112 . + 1 ID=cds-TGD72365.1;Parent=gene-C9F07_15165;Dbxref=NCBI_GP:TGD72365.1;Name=TGD72365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=C9F07_15165;partial=true;product=ASCH domain-containing protein;protein_id=TGD72365.1;start_range=.,1;transl_table=11 PYKI01001587.1 Genbank gene 76 1827 . - . ID=gene-C9F07_15170;Name=C9F07_15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15170 PYKI01001587.1 Protein Homology CDS 76 1827 . - 0 ID=cds-TGD72366.1;Parent=gene-C9F07_15170;Dbxref=NCBI_GP:TGD72366.1;Name=TGD72366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=C9F07_15170;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=TGD72366.1;transl_table=11 PYKI01001587.1 Genbank gene 1929 2342 . - . ID=gene-C9F07_15175;Name=C9F07_15175;end_range=2342,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15175;partial=true PYKI01001587.1 Protein Homology CDS 1929 2342 . - 0 ID=cds-TGD72367.1;Parent=gene-C9F07_15175;Dbxref=NCBI_GP:TGD72367.1;Name=TGD72367.1;end_range=2342,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458504.1;locus_tag=C9F07_15175;partial=true;product=isocitrate lyase;protein_id=TGD72367.1;transl_table=11 ##sequence-region PYKI01003353.1 1 2340 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003353.1 Genbank region 1 2340 . + . ID=PYKI01003353.1:1..2340;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003353.1 Genbank pseudogene 1 908 . - . ID=gene-C9F07_33770;Name=C9F07_33770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33770;pseudo=true PYKI01003353.1 Protein Homology CDS 1 908 . - 0 ID=cds-C9F07_33770;Parent=gene-C9F07_33770;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455072.1;locus_tag=C9F07_33770;product=hydrophobe/amphiphile efflux-1 family RND transporter;pseudo=true;transl_table=11 PYKI01003353.1 Genbank gene 931 2124 . - . ID=gene-C9F07_33775;Name=C9F07_33775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33775 PYKI01003353.1 Protein Homology CDS 931 2124 . - 0 ID=cds-TGD35015.1;Parent=gene-C9F07_33775;Dbxref=NCBI_GP:TGD35015.1;Name=TGD35015.1;Note=with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=C9F07_33775;product=efflux transporter periplasmic adaptor subunit;protein_id=TGD35015.1;transl_table=11 PYKI01003353.1 Genbank gene 2266 2340 . + . ID=gene-C9F07_33780;Name=C9F07_33780;end_range=2340,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33780;partial=true PYKI01003353.1 Protein Homology CDS 2266 2340 . + 0 ID=cds-TGD35016.1;Parent=gene-C9F07_33780;Dbxref=NCBI_GP:TGD35016.1;Name=TGD35016.1;end_range=2340,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455074.1;locus_tag=C9F07_33780;partial=true;product=DNA-binding transcriptional repressor AcrR;protein_id=TGD35016.1;transl_table=11 ##sequence-region PYKI01000394.1 1 2339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000394.1 Genbank region 1 2339 . + . ID=PYKI01000394.1:1..2339;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000394.1 Genbank gene 1 786 . + . ID=gene-C9F07_02980;Name=C9F07_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02980;partial=true;start_range=.,1 PYKI01000394.1 Protein Homology CDS 1 786 . + 0 ID=cds-TGE22774.1;Parent=gene-C9F07_02980;Dbxref=NCBI_GP:TGE22774.1;Name=TGE22774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456250.1;locus_tag=C9F07_02980;partial=true;product=mechanosensitive ion channel protein MscS;protein_id=TGE22774.1;start_range=.,1;transl_table=11 PYKI01000394.1 Genbank gene 868 1458 . - . ID=gene-C9F07_02985;Name=C9F07_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02985 PYKI01000394.1 Protein Homology CDS 868 1458 . - 0 ID=cds-TGE22775.1;Parent=gene-C9F07_02985;Dbxref=NCBI_GP:TGE22775.1;Name=TGE22775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=C9F07_02985;product=peptide ABC transporter ATP-binding protein;protein_id=TGE22775.1;transl_table=11 PYKI01000394.1 Genbank gene 1452 2249 . - . ID=gene-C9F07_02990;Name=C9F07_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02990 PYKI01000394.1 Protein Homology CDS 1452 2249 . - 0 ID=cds-TGE22776.1;Parent=gene-C9F07_02990;Dbxref=NCBI_GP:TGE22776.1;Name=TGE22776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=C9F07_02990;product=peptide ABC transporter ATP-binding protein;protein_id=TGE22776.1;transl_table=11 PYKI01000394.1 Genbank pseudogene 2243 2339 . - . ID=gene-C9F07_02995;Name=C9F07_02995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02995;pseudo=true PYKI01000394.1 Protein Homology CDS 2243 2339 . - 1 ID=cds-C9F07_02995;Parent=gene-C9F07_02995;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456253.1;locus_tag=C9F07_02995;product=peptide ABC transporter permease;pseudo=true;transl_table=11 ##sequence-region PYKI01000493.1 1 5150 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000493.1 Genbank region 1 5150 . + . ID=PYKI01000493.1:1..5150;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000493.1 Genbank gene 1 875 . + . ID=gene-C9F07_03975;Name=C9F07_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03975;partial=true;start_range=.,1 PYKI01000493.1 Protein Homology CDS 1 875 . + 2 ID=cds-TGE17762.1;Parent=gene-C9F07_03975;Dbxref=NCBI_GP:TGE17762.1;Name=TGE17762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=C9F07_03975;partial=true;product=hypothetical protein;protein_id=TGE17762.1;start_range=.,1;transl_table=11 PYKI01000493.1 Genbank gene 961 1584 . + . ID=gene-C9F07_03980;Name=C9F07_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03980 PYKI01000493.1 Protein Homology CDS 961 1584 . + 0 ID=cds-TGE17763.1;Parent=gene-C9F07_03980;Dbxref=NCBI_GP:TGE17763.1;Name=TGE17763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454969.1;locus_tag=C9F07_03980;product=hydrogen peroxide resistance inhibitor IprA;protein_id=TGE17763.1;transl_table=11 PYKI01000493.1 Genbank gene 1629 2786 . - . ID=gene-C9F07_03985;Name=C9F07_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03985 PYKI01000493.1 Protein Homology CDS 1629 2786 . - 0 ID=cds-TGE17764.1;Parent=gene-C9F07_03985;Dbxref=NCBI_GP:TGE17764.1;Name=TGE17764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454970.1;locus_tag=C9F07_03985;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=TGE17764.1;transl_table=11 PYKI01000493.1 Genbank pseudogene 2844 3035 . - . ID=gene-C9F07_03990;Name=C9F07_03990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03990;pseudo=true PYKI01000493.1 Protein Homology CDS 2844 3035 . - 0 ID=cds-C9F07_03990;Parent=gene-C9F07_03990;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532899.1;locus_tag=C9F07_03990;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000493.1 Genbank gene 3133 4353 . + . ID=gene-C9F07_03995;Name=C9F07_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03995 PYKI01000493.1 Protein Homology CDS 3133 4353 . + 0 ID=cds-TGE17765.1;Parent=gene-C9F07_03995;Dbxref=NCBI_GP:TGE17765.1;Name=TGE17765.1;Note=in Escherichia coli SbmA is involved in uptake of microcin J25%3B functions along with FhuA%2C TonB%2C and ExbB/D in this capacity%3B in Sinorhizobium meliloti%2C BacA is essential and required for symbiosis%3B defects appear to affect the cell envelope;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=C9F07_03995;product=peptide transporter;protein_id=TGE17765.1;transl_table=11 PYKI01000493.1 Genbank gene 4368 5150 . + . ID=gene-C9F07_04000;Name=C9F07_04000;end_range=5150,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04000;partial=true PYKI01000493.1 Protein Homology CDS 4368 5150 . + 0 ID=cds-TGE17766.1;Parent=gene-C9F07_04000;Dbxref=NCBI_GP:TGE17766.1;Name=TGE17766.1;end_range=5150,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=C9F07_04000;partial=true;product=DUF1615 domain-containing protein;protein_id=TGE17766.1;transl_table=11 ##sequence-region PYKI01003555.1 1 2339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003555.1 Genbank region 1 2339 . + . ID=PYKI01003555.1:1..2339;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003555.1 Genbank pseudogene 83 1246 . + . ID=gene-C9F07_35900;Name=C9F07_35900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35900;pseudo=true PYKI01003555.1 Protein Homology CDS 83 1246 . + 0 ID=cds-C9F07_35900;Parent=gene-C9F07_35900;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455075.1;locus_tag=C9F07_35900;product=mechanosensitive channel MscK;pseudo=true;transl_table=11 PYKI01003555.1 Genbank gene 1288 2211 . - . ID=gene-C9F07_35905;Name=C9F07_35905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35905 PYKI01003555.1 Protein Homology CDS 1288 2211 . - 0 ID=cds-TGD30701.1;Parent=gene-C9F07_35905;Dbxref=NCBI_GP:TGD30701.1;Name=TGD30701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455076.1;locus_tag=C9F07_35905;product=transposase;protein_id=TGD30701.1;transl_table=11 ##sequence-region PYKI01002612.1 1 2339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002612.1 Genbank region 1 2339 . + . ID=PYKI01002612.1:1..2339;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002612.1 Genbank gene 1 1031 . + . ID=gene-C9F07_25975;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=C9F07_25975;partial=true;start_range=.,1 PYKI01002612.1 Protein Homology CDS 1 1031 . + 2 ID=cds-TGD49553.1;Parent=gene-C9F07_25975;Dbxref=NCBI_GP:TGD49553.1;Name=TGD49553.1;gbkey=CDS;gene=xylB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458267.1;locus_tag=C9F07_25975;partial=true;product=xylulokinase;protein_id=TGD49553.1;start_range=.,1;transl_table=11 PYKI01002612.1 Genbank gene 1206 1559 . + . ID=gene-C9F07_25980;Name=C9F07_25980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25980 PYKI01002612.1 Protein Homology CDS 1206 1559 . + 0 ID=cds-TGD49554.1;Parent=gene-C9F07_25980;Dbxref=NCBI_GP:TGD49554.1;Name=TGD49554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458268.1;locus_tag=C9F07_25980;product=hypothetical protein;protein_id=TGD49554.1;transl_table=11 PYKI01002612.1 Genbank gene 1582 2339 . - . ID=gene-C9F07_25985;Name=C9F07_25985;end_range=2339,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25985;partial=true PYKI01002612.1 Protein Homology CDS 1582 2339 . - 2 ID=cds-TGD49555.1;Parent=gene-C9F07_25985;Dbxref=NCBI_GP:TGD49555.1;Name=TGD49555.1;Note=involved in enterobacterial common antigen biosynthesis%3B catalyzes the addition of O-acetyl groups to the N-acetyl-D-glucosamine residues of the trisaccharide repeat units of the enterobacterial common antigen;end_range=2339,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=C9F07_25985;partial=true;product=O-acetyltransferase;protein_id=TGD49555.1;transl_table=11 ##sequence-region PYKI01000834.1 1 2338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000834.1 Genbank region 1 2338 . + . ID=PYKI01000834.1:1..2338;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000834.1 Genbank gene 1 286 . + . ID=gene-C9F07_07605;Name=C9F07_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07605;partial=true;start_range=.,1 PYKI01000834.1 Protein Homology CDS 1 286 . + 1 ID=cds-TGE07220.1;Parent=gene-C9F07_07605;Dbxref=NCBI_GP:TGE07220.1;Name=TGE07220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455769.1;locus_tag=C9F07_07605;partial=true;product=hypothetical protein;protein_id=TGE07220.1;start_range=.,1;transl_table=11 PYKI01000834.1 Genbank gene 360 866 . + . ID=gene-C9F07_07610;Name=C9F07_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07610 PYKI01000834.1 Protein Homology CDS 360 866 . + 0 ID=cds-TGE07221.1;Parent=gene-C9F07_07610;Dbxref=NCBI_GP:TGE07221.1;Name=TGE07221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455768.1;locus_tag=C9F07_07610;product=ferritin-like domain-containing protein;protein_id=TGE07221.1;transl_table=11 PYKI01000834.1 Genbank gene 886 1764 . + . ID=gene-C9F07_07615;Name=C9F07_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07615 PYKI01000834.1 Protein Homology CDS 886 1764 . + 0 ID=cds-TGE07222.1;Parent=gene-C9F07_07615;Dbxref=NCBI_GP:TGE07222.1;Name=TGE07222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455767.1;locus_tag=C9F07_07615;product=Mn-containing catalase;protein_id=TGE07222.1;transl_table=11 PYKI01000834.1 Genbank pseudogene 1846 2338 . - . ID=gene-C9F07_07620;Name=C9F07_07620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07620;pseudo=true PYKI01000834.1 Protein Homology CDS 1846 2338 . - 1 ID=cds-C9F07_07620;Parent=gene-C9F07_07620;Note=receptor for colicin S4%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=C9F07_07620;product=outer membrane protein OmpW;pseudo=true;transl_table=11 ##sequence-region PYKI01002314.1 1 2337 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002314.1 Genbank region 1 2337 . + . ID=PYKI01002314.1:1..2337;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002314.1 Genbank gene 92 748 . + . ID=gene-C9F07_22690;Name=C9F07_22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22690 PYKI01002314.1 Protein Homology CDS 92 748 . + 0 ID=cds-TGD54240.1;Parent=gene-C9F07_22690;Dbxref=NCBI_GP:TGD54240.1;Name=TGD54240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752049.1;locus_tag=C9F07_22690;product=HNH endonuclease;protein_id=TGD54240.1;transl_table=11 PYKI01002314.1 Genbank gene 1229 1954 . - . ID=gene-C9F07_22695;Name=C9F07_22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22695 PYKI01002314.1 Protein Homology CDS 1229 1954 . - 0 ID=cds-TGD54239.1;Parent=gene-C9F07_22695;Dbxref=NCBI_GP:TGD54239.1;Name=TGD54239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458924.3;locus_tag=C9F07_22695;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=TGD54239.1;transl_table=11 ##sequence-region PYKI01000332.1 1 2337 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000332.1 Genbank region 1 2337 . + . ID=PYKI01000332.1:1..2337;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000332.1 Genbank gene 1 338 . + . ID=gene-C9F07_02390;Name=C9F07_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02390;partial=true;start_range=.,1 PYKI01000332.1 Protein Homology CDS 1 338 . + 2 ID=cds-TGE26852.1;Parent=gene-C9F07_02390;Dbxref=NCBI_GP:TGE26852.1;Name=TGE26852.1;Note=catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=C9F07_02390;partial=true;product=23S rRNA pseudouridylate synthase;protein_id=TGE26852.1;start_range=.,1;transl_table=11 PYKI01000332.1 Genbank gene 425 1015 . - . ID=gene-C9F07_02395;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=C9F07_02395 PYKI01000332.1 Protein Homology CDS 425 1015 . - 0 ID=cds-TGE26853.1;Parent=gene-C9F07_02395;Dbxref=NCBI_GP:TGE26853.1;Name=TGE26853.1;gbkey=CDS;gene=cobO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=C9F07_02395;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=TGE26853.1;transl_table=11 PYKI01000332.1 Genbank gene 1012 1773 . - . ID=gene-C9F07_02400;Name=C9F07_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02400 PYKI01000332.1 Protein Homology CDS 1012 1773 . - 0 ID=cds-TGE26854.1;Parent=gene-C9F07_02400;Dbxref=NCBI_GP:TGE26854.1;Name=TGE26854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455780.1;locus_tag=C9F07_02400;product=YciK family oxidoreductase;protein_id=TGE26854.1;transl_table=11 PYKI01000332.1 Genbank gene 2011 2337 . + . ID=gene-C9F07_02405;Name=C9F07_02405;end_range=2337,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02405;partial=true PYKI01000332.1 Protein Homology CDS 2011 2337 . + 0 ID=cds-TGE26855.1;Parent=gene-C9F07_02405;Dbxref=NCBI_GP:TGE26855.1;Name=TGE26855.1;Note=multicopy suppressor of htrA(degP);end_range=2337,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455781.1;locus_tag=C9F07_02405;partial=true;product=protease SohB;protein_id=TGE26855.1;transl_table=11 ##sequence-region PYKI01003505.1 1 2336 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003505.1 Genbank region 1 2336 . + . ID=PYKI01003505.1:1..2336;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003505.1 Genbank gene 42 1145 . + . ID=gene-C9F07_35310;Name=C9F07_35310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35310 PYKI01003505.1 Protein Homology CDS 42 1145 . + 0 ID=cds-TGD31904.1;Parent=gene-C9F07_35310;Dbxref=NCBI_GP:TGD31904.1;Name=TGD31904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=C9F07_35310;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=TGD31904.1;transl_table=11 PYKI01003505.1 Genbank gene 1209 2336 . + . ID=gene-C9F07_35315;Name=C9F07_35315;end_range=2336,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35315;partial=true PYKI01003505.1 Protein Homology CDS 1209 2336 . + 0 ID=cds-TGD31905.1;Parent=gene-C9F07_35315;Dbxref=NCBI_GP:TGD31905.1;Name=TGD31905.1;end_range=2336,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456899.1;locus_tag=C9F07_35315;partial=true;product=amino acid permease;protein_id=TGD31905.1;transl_table=11 ##sequence-region PYKI01002866.1 1 2334 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002866.1 Genbank region 1 2334 . + . ID=PYKI01002866.1:1..2334;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002866.1 Genbank gene 1 229 . - . ID=gene-C9F07_28715;Name=C9F07_28715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28715;partial=true;start_range=.,1 PYKI01002866.1 Protein Homology CDS 1 229 . - 0 ID=cds-TGD44954.1;Parent=gene-C9F07_28715;Dbxref=NCBI_GP:TGD44954.1;Name=TGD44954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455319.1;locus_tag=C9F07_28715;partial=true;product=hypothetical protein;protein_id=TGD44954.1;start_range=.,1;transl_table=11 PYKI01002866.1 Genbank gene 400 1875 . - . ID=gene-C9F07_28720;Name=C9F07_28720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28720 PYKI01002866.1 Protein Homology CDS 400 1875 . - 0 ID=cds-TGD44955.1;Parent=gene-C9F07_28720;Dbxref=NCBI_GP:TGD44955.1;Name=TGD44955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455320.1;locus_tag=C9F07_28720;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=TGD44955.1;transl_table=11 PYKI01002866.1 Genbank gene 1943 2329 . - . ID=gene-C9F07_28725;Name=C9F07_28725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28725 PYKI01002866.1 Protein Homology CDS 1943 2329 . - 0 ID=cds-TGD44956.1;Parent=gene-C9F07_28725;Dbxref=NCBI_GP:TGD44956.1;Name=TGD44956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001640297.1;locus_tag=C9F07_28725;product=molybdate-binding domain ModE;protein_id=TGD44956.1;transl_table=11 ##sequence-region PYKI01000325.1 1 2328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000325.1 Genbank region 1 2328 . + . ID=PYKI01000325.1:1..2328;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000325.1 Genbank pseudogene 1 373 . - . ID=gene-C9F07_02260;Name=C9F07_02260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02260;pseudo=true PYKI01000325.1 Protein Homology CDS 1 373 . - 0 ID=cds-C9F07_02260;Parent=gene-C9F07_02260;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=C9F07_02260;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000325.1 Genbank gene 426 632 . + . ID=gene-C9F07_02265;Name=C9F07_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02265 PYKI01000325.1 Protein Homology CDS 426 632 . + 0 ID=cds-TGE26873.1;Parent=gene-C9F07_02265;Dbxref=NCBI_GP:TGE26873.1;Name=TGE26873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446753.1;locus_tag=C9F07_02265;product=type I toxin-antitoxin system SymE family toxin;protein_id=TGE26873.1;transl_table=11 PYKI01000325.1 Genbank gene 807 1085 . - . ID=gene-C9F07_02270;Name=C9F07_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02270 PYKI01000325.1 Protein Homology CDS 807 1085 . - 0 ID=cds-TGE26875.1;Parent=gene-C9F07_02270;Dbxref=NCBI_GP:TGE26875.1;Name=TGE26875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=C9F07_02270;product=hypothetical protein;protein_id=TGE26875.1;transl_table=11 PYKI01000325.1 Genbank pseudogene 1207 1296 . - . ID=gene-C9F07_02275;Name=C9F07_02275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02275;pseudo=true PYKI01000325.1 Protein Homology CDS 1207 1296 . - 0 ID=cds-C9F07_02275;Parent=gene-C9F07_02275;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001366732.1;locus_tag=C9F07_02275;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 PYKI01000325.1 Genbank gene 1649 2095 . - . ID=gene-C9F07_02280;Name=C9F07_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02280 PYKI01000325.1 Protein Homology CDS 1649 2095 . - 0 ID=cds-TGE26874.1;Parent=gene-C9F07_02280;Dbxref=NCBI_GP:TGE26874.1;Name=TGE26874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000116458.1;locus_tag=C9F07_02280;product=hypothetical protein;protein_id=TGE26874.1;transl_table=11 PYKI01000325.1 Genbank gene 2092 2328 . - . ID=gene-C9F07_02285;Name=C9F07_02285;end_range=2328,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02285;partial=true PYKI01000325.1 Protein Homology CDS 2092 2328 . - 0 ID=cds-TGE26876.1;Parent=gene-C9F07_02285;Dbxref=NCBI_GP:TGE26876.1;Name=TGE26876.1;end_range=2328,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001610558.1;locus_tag=C9F07_02285;partial=true;product=Rhs family protein;protein_id=TGE26876.1;transl_table=11 ##sequence-region PYKI01000458.1 1 2328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000458.1 Genbank region 1 2328 . + . ID=PYKI01000458.1:1..2328;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000458.1 Genbank gene 1 1943 . + . ID=gene-C9F07_03585;Name=C9F07_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03585;partial=true;start_range=.,1 PYKI01000458.1 Protein Homology CDS 1 1943 . + 2 ID=cds-TGE19961.1;Parent=gene-C9F07_03585;Dbxref=NCBI_GP:TGE19961.1;Name=TGE19961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462370.1;locus_tag=C9F07_03585;partial=true;product=hypothetical protein;protein_id=TGE19961.1;start_range=.,1;transl_table=11 PYKI01000458.1 Genbank gene 1986 2328 . - . ID=gene-C9F07_03590;Name=C9F07_03590;end_range=2328,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03590;partial=true PYKI01000458.1 Protein Homology CDS 1986 2328 . - 1 ID=cds-TGE19962.1;Parent=gene-C9F07_03590;Dbxref=NCBI_GP:TGE19962.1;Name=TGE19962.1;end_range=2328,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458434.1;locus_tag=C9F07_03590;partial=true;product=hypothetical protein;protein_id=TGE19962.1;transl_table=11 ##sequence-region PYKI01002029.1 1 2326 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002029.1 Genbank region 1 2326 . + . ID=PYKI01002029.1:1..2326;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002029.1 Genbank gene 1 793 . + . ID=gene-C9F07_19585;Name=C9F07_19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19585;partial=true;start_range=.,1 PYKI01002029.1 Protein Homology CDS 1 793 . + 1 ID=cds-TGD60036.1;Parent=gene-C9F07_19585;Dbxref=NCBI_GP:TGD60036.1;Name=TGD60036.1;Note=constitutive%3B catalyzes the formation of cadaverine from lysine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457089.1;locus_tag=C9F07_19585;partial=true;product=lysine decarboxylase LdcC;protein_id=TGD60036.1;start_range=.,1;transl_table=11 PYKI01002029.1 Genbank gene 849 2309 . + . ID=gene-C9F07_19590;Name=C9F07_19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19590 PYKI01002029.1 Protein Homology CDS 849 2309 . + 0 ID=cds-TGD60037.1;Parent=gene-C9F07_19590;Dbxref=NCBI_GP:TGD60037.1;Name=TGD60037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=C9F07_19590;product=MFS transporter;protein_id=TGD60037.1;transl_table=11 ##sequence-region PYKI01003144.1 1 5144 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003144.1 Genbank region 1 5144 . + . ID=PYKI01003144.1:1..5144;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003144.1 Genbank pseudogene 49 642 . + . ID=gene-C9F07_31510;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=pseudogene;locus_tag=C9F07_31510;pseudo=true PYKI01003144.1 Protein Homology CDS 49 642 . + 0 ID=cds-C9F07_31510;Parent=gene-C9F07_31510;Note=internal stop;gbkey=CDS;gene=rdgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=C9F07_31510;product=non-canonical purine NTP pyrophosphatase%2C RdgB/HAM1 family;pseudo=true;transl_table=11 PYKI01003144.1 Genbank gene 635 1771 . + . ID=gene-C9F07_31515;Name=C9F07_31515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31515 PYKI01003144.1 Protein Homology CDS 635 1771 . + 0 ID=cds-TGD38527.1;Parent=gene-C9F07_31515;Dbxref=NCBI_GP:TGD38527.1;Name=TGD38527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457496.1;locus_tag=C9F07_31515;product=YggW family oxidoreductase;protein_id=TGD38527.1;transl_table=11 PYKI01003144.1 Genbank pseudogene 1863 2870 . - . ID=gene-C9F07_31520;Name=C9F07_31520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31520;pseudo=true PYKI01003144.1 Protein Homology CDS 1863 2870 . - 0 ID=cds-C9F07_31520;Parent=gene-C9F07_31520;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457497.1;locus_tag=C9F07_31520;product=DUF1202 domain-containing protein;pseudo=true;transl_table=11 PYKI01003144.1 Genbank gene 3003 4049 . - . ID=gene-C9F07_31525;Name=C9F07_31525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31525 PYKI01003144.1 Protein Homology CDS 3003 4049 . - 0 ID=cds-TGD38528.1;Parent=gene-C9F07_31525;Dbxref=NCBI_GP:TGD38528.1;Name=TGD38528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457498.1;locus_tag=C9F07_31525;product=L-asparaginase 2;protein_id=TGD38528.1;transl_table=11 PYKI01003144.1 Genbank gene 4238 4957 . - . ID=gene-C9F07_31530;Name=C9F07_31530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31530 PYKI01003144.1 Protein Homology CDS 4238 4957 . - 0 ID=cds-TGD38529.1;Parent=gene-C9F07_31530;Dbxref=NCBI_GP:TGD38529.1;Name=TGD38529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457500.1;locus_tag=C9F07_31530;product=DUF2884 domain-containing protein;protein_id=TGD38529.1;transl_table=11 PYKI01003144.1 Genbank gene 5007 5144 . - . ID=gene-C9F07_31535;Name=C9F07_31535;end_range=5144,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31535;partial=true PYKI01003144.1 Protein Homology CDS 5007 5144 . - 0 ID=cds-TGD38530.1;Parent=gene-C9F07_31535;Dbxref=NCBI_GP:TGD38530.1;Name=TGD38530.1;end_range=5144,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457501.1;locus_tag=C9F07_31535;partial=true;product=hypothetical protein;protein_id=TGD38530.1;transl_table=11 ##sequence-region PYKI01002787.1 1 2326 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002787.1 Genbank region 1 2326 . + . ID=PYKI01002787.1:1..2326;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002787.1 Genbank gene 1 290 . - . ID=gene-C9F07_27845;Name=C9F07_27845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27845;partial=true;start_range=.,1 PYKI01002787.1 Protein Homology CDS 1 290 . - 0 ID=cds-TGD46144.1;Parent=gene-C9F07_27845;Dbxref=NCBI_GP:TGD46144.1;Name=TGD46144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456729.1;locus_tag=C9F07_27845;partial=true;product=DedA family protein;protein_id=TGD46144.1;start_range=.,1;transl_table=11 PYKI01002787.1 Genbank gene 422 1009 . + . ID=gene-C9F07_27850;Name=C9F07_27850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27850 PYKI01002787.1 Protein Homology CDS 422 1009 . + 0 ID=cds-TGD46140.1;Parent=gene-C9F07_27850;Dbxref=NCBI_GP:TGD46140.1;Name=TGD46140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456728.1;locus_tag=C9F07_27850;product=YIP1 family protein;protein_id=TGD46140.1;transl_table=11 PYKI01002787.1 Genbank gene 1009 1284 . + . ID=gene-C9F07_27855;Name=C9F07_27855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27855 PYKI01002787.1 Protein Homology CDS 1009 1284 . + 0 ID=cds-TGD46141.1;Parent=gene-C9F07_27855;Dbxref=NCBI_GP:TGD46141.1;Name=TGD46141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344104.1;locus_tag=C9F07_27855;product=hypothetical protein;protein_id=TGD46141.1;transl_table=11 PYKI01002787.1 Genbank gene 1175 2122 . + . ID=gene-C9F07_27860;Name=C9F07_27860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27860 PYKI01002787.1 Protein Homology CDS 1175 2122 . + 0 ID=cds-TGD46142.1;Parent=gene-C9F07_27860;Dbxref=NCBI_GP:TGD46142.1;Name=TGD46142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=C9F07_27860;product=D-alanyl-D-alanine endopeptidase;protein_id=TGD46142.1;transl_table=11 PYKI01002787.1 Genbank gene 2181 2326 . - . ID=gene-C9F07_27865;Name=C9F07_27865;end_range=2326,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27865;partial=true PYKI01002787.1 Protein Homology CDS 2181 2326 . - 2 ID=cds-TGD46143.1;Parent=gene-C9F07_27865;Dbxref=NCBI_GP:TGD46143.1;Name=TGD46143.1;end_range=2326,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456727.1;locus_tag=C9F07_27865;partial=true;product=lactate dehydrogenase;protein_id=TGD46143.1;transl_table=11 ##sequence-region PYKI01001665.1 1 2325 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001665.1 Genbank region 1 2325 . + . ID=PYKI01001665.1:1..2325;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001665.1 Genbank gene 1 114 . + . ID=gene-C9F07_15895;Name=C9F07_15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15895;partial=true;start_range=.,1 PYKI01001665.1 Protein Homology CDS 1 114 . + 0 ID=cds-TGD70131.1;Parent=gene-C9F07_15895;Dbxref=NCBI_GP:TGD70131.1;Name=TGD70131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456736.1;locus_tag=C9F07_15895;partial=true;product=5-carboxymethyl-2-hydroxymuconate isomerase;protein_id=TGD70131.1;start_range=.,1;transl_table=11 PYKI01001665.1 Genbank gene 123 767 . + . ID=gene-C9F07_15900;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=C9F07_15900 PYKI01001665.1 Protein Homology CDS 123 767 . + 0 ID=cds-TGD70132.1;Parent=gene-C9F07_15900;Dbxref=NCBI_GP:TGD70132.1;Name=TGD70132.1;gbkey=CDS;gene=maiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=C9F07_15900;product=maleylacetoacetate isomerase;protein_id=TGD70132.1;transl_table=11 PYKI01001665.1 Genbank gene 782 1975 . + . ID=gene-C9F07_15905;Name=C9F07_15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15905 PYKI01001665.1 Protein Homology CDS 782 1975 . + 0 ID=cds-TGD70133.1;Parent=gene-C9F07_15905;Dbxref=NCBI_GP:TGD70133.1;Name=TGD70133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=C9F07_15905;product=3-hydroxybenzoate 6-monooxygenase;protein_id=TGD70133.1;transl_table=11 PYKI01001665.1 Genbank pseudogene 2084 2275 . + . ID=gene-C9F07_15910;Name=C9F07_15910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15910;pseudo=true PYKI01001665.1 Protein Homology CDS 2084 2275 . + 0 ID=cds-C9F07_15910;Parent=gene-C9F07_15910;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=C9F07_15910;product=tRNA-dihydrouridine synthase;pseudo=true;transl_table=11 ##sequence-region PYKI01000863.1 1 2323 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000863.1 Genbank region 1 2323 . + . ID=PYKI01000863.1:1..2323;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000863.1 Genbank gene 1 125 . - . ID=gene-C9F07_07905;Name=C9F07_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07905;partial=true;start_range=.,1 PYKI01000863.1 Protein Homology CDS 1 125 . - 0 ID=cds-TGE05775.1;Parent=gene-C9F07_07905;Dbxref=NCBI_GP:TGE05775.1;Name=TGE05775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454882.1;locus_tag=C9F07_07905;partial=true;product=type VI secretion system tube protein Hcp;protein_id=TGE05775.1;start_range=.,1;transl_table=11 PYKI01000863.1 Genbank gene 362 787 . - . ID=gene-C9F07_07910;Name=C9F07_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07910 PYKI01000863.1 Protein Homology CDS 362 787 . - 0 ID=cds-TGE05776.1;Parent=gene-C9F07_07910;Dbxref=NCBI_GP:TGE05776.1;Name=TGE05776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001171576.1;locus_tag=C9F07_07910;product=hypothetical protein;protein_id=TGE05776.1;transl_table=11 PYKI01000863.1 Genbank gene 759 1160 . - . ID=gene-C9F07_07915;Name=C9F07_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07915 PYKI01000863.1 Protein Homology CDS 759 1160 . - 0 ID=cds-TGE05777.1;Parent=gene-C9F07_07915;Dbxref=NCBI_GP:TGE05777.1;Name=TGE05777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001147173.1;locus_tag=C9F07_07915;product=hypothetical protein;protein_id=TGE05777.1;transl_table=11 PYKI01000863.1 Genbank gene 1213 2323 . - . ID=gene-C9F07_07920;Name=tssC;end_range=2323,.;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=C9F07_07920;partial=true PYKI01000863.1 Protein Homology CDS 1213 2323 . - 1 ID=cds-TGE05778.1;Parent=gene-C9F07_07920;Dbxref=NCBI_GP:TGE05778.1;Name=TGE05778.1;end_range=2323,.;gbkey=CDS;gene=tssC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=C9F07_07920;partial=true;product=type VI secretion system contractile sheath large subunit;protein_id=TGE05778.1;transl_table=11 ##sequence-region PYKI01001512.1 1 2322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001512.1 Genbank region 1 2322 . + . ID=PYKI01001512.1:1..2322;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001512.1 Genbank gene 1 461 . + . ID=gene-C9F07_14420;Name=C9F07_14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14420;partial=true;start_range=.,1 PYKI01001512.1 Protein Homology CDS 1 461 . + 2 ID=cds-TGD77114.1;Parent=gene-C9F07_14420;Dbxref=NCBI_GP:TGD77114.1;Name=TGD77114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=C9F07_14420;partial=true;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase;protein_id=TGD77114.1;start_range=.,1;transl_table=11 PYKI01001512.1 Genbank gene 446 2068 . - . ID=gene-C9F07_14425;Name=C9F07_14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14425 PYKI01001512.1 Protein Homology CDS 446 2068 . - 0 ID=cds-TGD77115.1;Parent=gene-C9F07_14425;Dbxref=NCBI_GP:TGD77115.1;Name=TGD77115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457117.1;locus_tag=C9F07_14425;product=L-aspartate oxidase;protein_id=TGD77115.1;transl_table=11 ##sequence-region PYKI01001418.1 1 2316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001418.1 Genbank region 1 2316 . + . ID=PYKI01001418.1:1..2316;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001418.1 Genbank gene 1 1534 . + . ID=gene-C9F07_13445;Name=C9F07_13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13445;partial=true;start_range=.,1 PYKI01001418.1 Protein Homology CDS 1 1534 . + 1 ID=cds-TGD83757.1;Parent=gene-C9F07_13445;Dbxref=NCBI_GP:TGD83757.1;Name=TGD83757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=C9F07_13445;partial=true;product=4-alpha-glucanotransferase;protein_id=TGD83757.1;start_range=.,1;transl_table=11 PYKI01001418.1 Genbank gene 1653 2316 . - . ID=gene-C9F07_13450;Name=C9F07_13450;end_range=2316,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13450;partial=true PYKI01001418.1 Protein Homology CDS 1653 2316 . - 1 ID=cds-TGD83758.1;Parent=gene-C9F07_13450;Dbxref=NCBI_GP:TGD83758.1;Name=TGD83758.1;end_range=2316,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458392.1;locus_tag=C9F07_13450;partial=true;product=gluconate transporter;protein_id=TGD83758.1;transl_table=11 ##sequence-region PYKI01002658.1 1 2312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002658.1 Genbank region 1 2312 . + . ID=PYKI01002658.1:1..2312;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002658.1 Genbank gene 1 163 . - . ID=gene-C9F07_26450;Name=C9F07_26450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26450;partial=true;start_range=.,1 PYKI01002658.1 Protein Homology CDS 1 163 . - 0 ID=cds-TGD49217.1;Parent=gene-C9F07_26450;Dbxref=NCBI_GP:TGD49217.1;Name=TGD49217.1;Note=oxidizes malate to oxaloacetate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=C9F07_26450;partial=true;product=malate dehydrogenase;protein_id=TGD49217.1;start_range=.,1;transl_table=11 PYKI01002658.1 Genbank gene 578 1048 . + . ID=gene-C9F07_26455;Name=C9F07_26455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26455 PYKI01002658.1 Protein Homology CDS 578 1048 . + 0 ID=cds-TGD49218.1;Parent=gene-C9F07_26455;Dbxref=NCBI_GP:TGD49218.1;Name=TGD49218.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=C9F07_26455;product=arginine repressor;protein_id=TGD49218.1;transl_table=11 PYKI01002658.1 Genbank gene 1413 1676 . + . ID=gene-C9F07_26460;Name=C9F07_26460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26460 PYKI01002658.1 Protein Homology CDS 1413 1676 . + 0 ID=cds-TGD49219.1;Parent=gene-C9F07_26460;Dbxref=NCBI_GP:TGD49219.1;Name=TGD49219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=C9F07_26460;product=hypothetical protein;protein_id=TGD49219.1;transl_table=11 PYKI01002658.1 Genbank gene 1780 2046 . + . ID=gene-C9F07_26465;Name=C9F07_26465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26465 PYKI01002658.1 Protein Homology CDS 1780 2046 . + 0 ID=cds-TGD49220.1;Parent=gene-C9F07_26465;Dbxref=NCBI_GP:TGD49220.1;Name=TGD49220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457738.1;locus_tag=C9F07_26465;product=DUF1471 domain-containing protein;protein_id=TGD49220.1;transl_table=11 PYKI01002658.1 Genbank gene 2106 2312 . - . ID=gene-C9F07_26470;Name=C9F07_26470;end_range=2312,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26470;partial=true PYKI01002658.1 Protein Homology CDS 2106 2312 . - 0 ID=cds-TGD49221.1;Parent=gene-C9F07_26470;Dbxref=NCBI_GP:TGD49221.1;Name=TGD49221.1;end_range=2312,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457739.1;locus_tag=C9F07_26470;partial=true;product=hypothetical protein;protein_id=TGD49221.1;transl_table=11 ##sequence-region PYKI01003123.1 1 2309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003123.1 Genbank region 1 2309 . + . ID=PYKI01003123.1:1..2309;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003123.1 Genbank gene 1 812 . + . ID=gene-C9F07_31235;Name=C9F07_31235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31235;partial=true;start_range=.,1 PYKI01003123.1 Protein Homology CDS 1 812 . + 2 ID=cds-TGD39164.1;Parent=gene-C9F07_31235;Dbxref=NCBI_GP:TGD39164.1;Name=TGD39164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456976.1;locus_tag=C9F07_31235;partial=true;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=TGD39164.1;start_range=.,1;transl_table=11 PYKI01003123.1 Genbank gene 933 1844 . + . ID=gene-C9F07_31240;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=C9F07_31240 PYKI01003123.1 Protein Homology CDS 933 1844 . + 0 ID=cds-TGD39165.1;Parent=gene-C9F07_31240;Dbxref=NCBI_GP:TGD39165.1;Name=TGD39165.1;Note=catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide;gbkey=CDS;gene=cysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=C9F07_31240;product=cysteine synthase CysM;protein_id=TGD39165.1;transl_table=11 PYKI01003123.1 Genbank gene 1877 2236 . - . ID=gene-C9F07_31245;Name=C9F07_31245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31245 PYKI01003123.1 Protein Homology CDS 1877 2236 . - 0 ID=cds-TGD39166.1;Parent=gene-C9F07_31245;Dbxref=NCBI_GP:TGD39166.1;Name=TGD39166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675230.1;locus_tag=C9F07_31245;product=hypothetical protein;protein_id=TGD39166.1;transl_table=11 ##sequence-region PYKI01001550.1 1 2303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001550.1 Genbank region 1 2303 . + . ID=PYKI01001550.1:1..2303;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001550.1 Genbank gene 1 264 . - . ID=gene-C9F07_14855;Name=C9F07_14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14855;partial=true;start_range=.,1 PYKI01001550.1 Protein Homology CDS 1 264 . - 0 ID=cds-TGD74494.1;Parent=gene-C9F07_14855;Dbxref=NCBI_GP:TGD74494.1;Name=TGD74494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308501.1;locus_tag=C9F07_14855;partial=true;product=hypothetical protein;protein_id=TGD74494.1;start_range=.,1;transl_table=11 PYKI01001550.1 Genbank gene 288 1187 . - . ID=gene-C9F07_14860;Name=C9F07_14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14860 PYKI01001550.1 Protein Homology CDS 288 1187 . - 0 ID=cds-TGD74492.1;Parent=gene-C9F07_14860;Dbxref=NCBI_GP:TGD74492.1;Name=TGD74492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=C9F07_14860;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=TGD74492.1;transl_table=11 PYKI01001550.1 Genbank gene 1188 1430 . - . ID=gene-C9F07_14865;Name=C9F07_14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14865 PYKI01001550.1 Protein Homology CDS 1188 1430 . - 0 ID=cds-TGD74493.1;Parent=gene-C9F07_14865;Dbxref=NCBI_GP:TGD74493.1;Name=TGD74493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455018.1;locus_tag=C9F07_14865;product=exodeoxyribonuclease VII small subunit;protein_id=TGD74493.1;transl_table=11 PYKI01001550.1 Genbank gene 1640 2303 . + . ID=gene-C9F07_14870;Name=thiI;end_range=2303,.;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=C9F07_14870;partial=true PYKI01001550.1 Protein Homology CDS 1640 2303 . + 0 ID=cds-TGD74495.1;Parent=gene-C9F07_14870;Dbxref=NCBI_GP:TGD74495.1;Name=TGD74495.1;end_range=2303,.;gbkey=CDS;gene=thiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455019.1;locus_tag=C9F07_14870;partial=true;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=TGD74495.1;transl_table=11 ##sequence-region PYKI01001800.1 1 2303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001800.1 Genbank region 1 2303 . + . ID=PYKI01001800.1:1..2303;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001800.1 Genbank gene 91 273 . - . ID=gene-C9F07_17325;Name=C9F07_17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17325 PYKI01001800.1 Protein Homology CDS 91 273 . - 0 ID=cds-TGD65907.1;Parent=gene-C9F07_17325;Dbxref=NCBI_GP:TGD65907.1;Name=TGD65907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000896964.1;locus_tag=C9F07_17325;product=hypothetical protein;protein_id=TGD65907.1;transl_table=11 PYKI01001800.1 Genbank gene 283 753 . + . ID=gene-C9F07_17330;Name=C9F07_17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17330 PYKI01001800.1 Protein Homology CDS 283 753 . + 0 ID=cds-TGD65908.1;Parent=gene-C9F07_17330;Dbxref=NCBI_GP:TGD65908.1;Name=TGD65908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=C9F07_17330;product=prepilin peptidase-dependent protein;protein_id=TGD65908.1;transl_table=11 PYKI01001800.1 Genbank gene 744 1307 . + . ID=gene-C9F07_17335;Name=C9F07_17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17335 PYKI01001800.1 Protein Homology CDS 744 1307 . + 0 ID=cds-TGD65909.1;Parent=gene-C9F07_17335;Dbxref=NCBI_GP:TGD65909.1;Name=TGD65909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=C9F07_17335;product=prepilin-type cleavage/methylation domain-containing protein;protein_id=TGD65909.1;transl_table=11 PYKI01001800.1 Genbank gene 1304 1711 . + . ID=gene-C9F07_17340;Name=C9F07_17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17340 PYKI01001800.1 Protein Homology CDS 1304 1711 . + 0 ID=cds-TGD65910.1;Parent=gene-C9F07_17340;Dbxref=NCBI_GP:TGD65910.1;Name=TGD65910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=C9F07_17340;product=DUF2509 domain-containing protein;protein_id=TGD65910.1;transl_table=11 PYKI01001800.1 Genbank gene 1696 2016 . + . ID=gene-C9F07_17345;Name=C9F07_17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17345 PYKI01001800.1 Protein Homology CDS 1696 2016 . + 0 ID=cds-TGD65911.1;Parent=gene-C9F07_17345;Dbxref=NCBI_GP:TGD65911.1;Name=TGD65911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=C9F07_17345;product=prepilin-type cleavage/methylation domain-containing protein;protein_id=TGD65911.1;transl_table=11 PYKI01001800.1 Genbank gene 2032 2303 . + . ID=gene-C9F07_17350;Name=C9F07_17350;end_range=2303,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17350;partial=true PYKI01001800.1 Protein Homology CDS 2032 2303 . + 0 ID=cds-TGD65912.1;Parent=gene-C9F07_17350;Dbxref=NCBI_GP:TGD65912.1;Name=TGD65912.1;end_range=2303,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457389.1;locus_tag=C9F07_17350;partial=true;product=exonuclease V subunit gamma;protein_id=TGD65912.1;transl_table=11 ##sequence-region PYKI01000742.1 1 2299 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000742.1 Genbank region 1 2299 . + . ID=PYKI01000742.1:1..2299;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000742.1 Genbank pseudogene 62 2299 . - . ID=gene-C9F07_06535;Name=C9F07_06535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06535;pseudo=true PYKI01000742.1 Protein Homology CDS 62 2299 . - 0 ID=cds-C9F07_06535;Parent=gene-C9F07_06535;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=C9F07_06535;product=nitrate reductase subunit alpha;pseudo=true;transl_table=11 ##sequence-region PYKI01001717.1 1 5123 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001717.1 Genbank region 1 5123 . + . ID=PYKI01001717.1:1..5123;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001717.1 Genbank gene 1 215 . + . ID=gene-C9F07_16395;Name=C9F07_16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16395;partial=true;start_range=.,1 PYKI01001717.1 Protein Homology CDS 1 215 . + 2 ID=cds-TGD69093.1;Parent=gene-C9F07_16395;Dbxref=NCBI_GP:TGD69093.1;Name=TGD69093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457210.1;locus_tag=C9F07_16395;partial=true;product=MFS transporter;protein_id=TGD69093.1;start_range=.,1;transl_table=11 PYKI01001717.1 Genbank gene 338 523 . - . ID=gene-C9F07_16400;Name=C9F07_16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16400 PYKI01001717.1 Protein Homology CDS 338 523 . - 0 ID=cds-TGD69094.1;Parent=gene-C9F07_16400;Dbxref=NCBI_GP:TGD69094.1;Name=TGD69094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344147.1;locus_tag=C9F07_16400;product=hypothetical protein;protein_id=TGD69094.1;transl_table=11 PYKI01001717.1 Genbank gene 712 1242 . + . ID=gene-C9F07_16405;Name=C9F07_16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16405 PYKI01001717.1 Protein Homology CDS 712 1242 . + 0 ID=cds-TGD69095.1;Parent=gene-C9F07_16405;Dbxref=NCBI_GP:TGD69095.1;Name=TGD69095.1;Note=DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457211.1;locus_tag=C9F07_16405;product=transcriptional repressor MprA;protein_id=TGD69095.1;transl_table=11 PYKI01001717.1 Genbank gene 1369 2541 . + . ID=gene-C9F07_16410;Name=C9F07_16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16410 PYKI01001717.1 Protein Homology CDS 1369 2541 . + 0 ID=cds-TGD69096.1;Parent=gene-C9F07_16410;Dbxref=NCBI_GP:TGD69096.1;Name=TGD69096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=C9F07_16410;product=multidrug export protein EmrA;protein_id=TGD69096.1;transl_table=11 PYKI01001717.1 Genbank gene 2558 4096 . + . ID=gene-C9F07_16415;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=C9F07_16415 PYKI01001717.1 Protein Homology CDS 2558 4096 . + 0 ID=cds-TGD69097.1;Parent=gene-C9F07_16415;Dbxref=NCBI_GP:TGD69097.1;Name=TGD69097.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=C9F07_16415;product=multidrug efflux MFS transporter subunit EmrB;protein_id=TGD69097.1;transl_table=11 PYKI01001717.1 Genbank gene 4145 5123 . - . ID=gene-C9F07_16420;Name=C9F07_16420;end_range=5123,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16420;partial=true PYKI01001717.1 Protein Homology CDS 4145 5123 . - 1 ID=cds-TGD69098.1;Parent=gene-C9F07_16420;Dbxref=NCBI_GP:TGD69098.1;Name=TGD69098.1;end_range=5123,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457214.1;locus_tag=C9F07_16420;partial=true;product=porin;protein_id=TGD69098.1;transl_table=11 ##sequence-region PYKI01000800.1 1 2298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000800.1 Genbank region 1 2298 . + . ID=PYKI01000800.1:1..2298;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000800.1 Genbank gene 1 2006 . + . ID=gene-C9F07_07205;Name=C9F07_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07205;partial=true;start_range=.,1 PYKI01000800.1 Protein Homology CDS 1 2006 . + 2 ID=cds-TGE09138.1;Parent=gene-C9F07_07205;Dbxref=NCBI_GP:TGE09138.1;Name=TGE09138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=C9F07_07205;partial=true;product=fimbrial assembly protein;protein_id=TGE09138.1;start_range=.,1;transl_table=11 PYKI01000800.1 Genbank gene 2015 2298 . + . ID=gene-C9F07_07210;Name=C9F07_07210;end_range=2298,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07210;partial=true PYKI01000800.1 Protein Homology CDS 2015 2298 . + 0 ID=cds-TGE09139.1;Parent=gene-C9F07_07210;Dbxref=NCBI_GP:TGE09139.1;Name=TGE09139.1;end_range=2298,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=C9F07_07210;partial=true;product=hypothetical protein;protein_id=TGE09139.1;transl_table=11 ##sequence-region PYKI01001388.1 1 2298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001388.1 Genbank region 1 2298 . + . ID=PYKI01001388.1:1..2298;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001388.1 Genbank gene 1 182 . + . ID=gene-C9F07_13055;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=C9F07_13055;partial=true;start_range=.,1 PYKI01001388.1 Protein Homology CDS 1 182 . + 2 ID=cds-TGD84331.1;Parent=gene-C9F07_13055;Dbxref=NCBI_GP:TGD84331.1;Name=TGD84331.1;Note=mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose;gbkey=CDS;gene=galM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455315.1;locus_tag=C9F07_13055;partial=true;product=galactose-1-epimerase;protein_id=TGD84331.1;start_range=.,1;transl_table=11 PYKI01001388.1 Genbank gene 197 388 . + . ID=gene-C9F07_13060;Name=C9F07_13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13060 PYKI01001388.1 Protein Homology CDS 197 388 . + 0 ID=cds-TGD84332.1;Parent=gene-C9F07_13060;Dbxref=NCBI_GP:TGD84332.1;Name=TGD84332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219013.1;locus_tag=C9F07_13060;product=hypothetical protein;protein_id=TGD84332.1;transl_table=11 PYKI01001388.1 Genbank gene 406 1158 . + . ID=gene-C9F07_13065;Name=C9F07_13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13065 PYKI01001388.1 Protein Homology CDS 406 1158 . + 0 ID=cds-TGD84333.1;Parent=gene-C9F07_13065;Dbxref=NCBI_GP:TGD84333.1;Name=TGD84333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=C9F07_13065;product=2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase;protein_id=TGD84333.1;transl_table=11 PYKI01001388.1 Genbank gene 1249 2025 . - . ID=gene-C9F07_13070;Name=C9F07_13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13070 PYKI01001388.1 Protein Homology CDS 1249 2025 . - 0 ID=cds-TGD84334.1;Parent=gene-C9F07_13070;Dbxref=NCBI_GP:TGD84334.1;Name=TGD84334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=C9F07_13070;product=ABC transporter ATP-binding protein;protein_id=TGD84334.1;transl_table=11 PYKI01001388.1 Genbank pseudogene 2025 2270 . - . ID=gene-C9F07_13075;Name=C9F07_13075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13075;pseudo=true PYKI01001388.1 Protein Homology CDS 2025 2270 . - 0 ID=cds-C9F07_13075;Parent=gene-C9F07_13075;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455312.1;locus_tag=C9F07_13075;product=iron-siderophore ABC transporter permease;pseudo=true;transl_table=11 ##sequence-region PYKI01001807.1 1 2296 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001807.1 Genbank region 1 2296 . + . ID=PYKI01001807.1:1..2296;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001807.1 Genbank gene 1 1233 . - . ID=gene-C9F07_17400;Name=C9F07_17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17400;partial=true;start_range=.,1 PYKI01001807.1 Protein Homology CDS 1 1233 . - 0 ID=cds-TGD65393.1;Parent=gene-C9F07_17400;Dbxref=NCBI_GP:TGD65393.1;Name=TGD65393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=C9F07_17400;partial=true;product=RNA polymerase-associated protein RapA;protein_id=TGD65393.1;start_range=.,1;transl_table=11 PYKI01001807.1 Genbank gene 1258 1506 . + . ID=gene-C9F07_17405;Name=C9F07_17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17405 PYKI01001807.1 Protein Homology CDS 1258 1506 . + 0 ID=cds-TGD65394.1;Parent=gene-C9F07_17405;Dbxref=NCBI_GP:TGD65394.1;Name=TGD65394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328796.1;locus_tag=C9F07_17405;product=hypothetical protein;protein_id=TGD65394.1;transl_table=11 PYKI01001807.1 Genbank gene 1407 2296 . - . ID=gene-C9F07_17410;Name=C9F07_17410;end_range=2296,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17410;partial=true PYKI01001807.1 Protein Homology CDS 1407 2296 . - 2 ID=cds-TGD65395.1;Parent=gene-C9F07_17410;Dbxref=NCBI_GP:TGD65395.1;Name=TGD65395.1;Note=Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C;end_range=2296,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=C9F07_17410;partial=true;product=DNA polymerase II;protein_id=TGD65395.1;transl_table=11 ##sequence-region PYKI01002258.1 1 2238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002258.1 Genbank region 1 2238 . + . ID=PYKI01002258.1:1..2238;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002258.1 Genbank gene 1 1908 . - . ID=gene-C9F07_22100;Name=C9F07_22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22100;partial=true;start_range=.,1 PYKI01002258.1 Protein Homology CDS 1 1908 . - 0 ID=cds-TGD55551.1;Parent=gene-C9F07_22100;Dbxref=NCBI_GP:TGD55551.1;Name=TGD55551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458336.1;locus_tag=C9F07_22100;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGD55551.1;start_range=.,1;transl_table=11 PYKI01002258.1 Genbank gene 1905 2238 . - . ID=gene-C9F07_22105;Name=C9F07_22105;end_range=2238,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22105;partial=true PYKI01002258.1 Protein Homology CDS 1905 2238 . - 1 ID=cds-TGD55552.1;Parent=gene-C9F07_22105;Dbxref=NCBI_GP:TGD55552.1;Name=TGD55552.1;end_range=2238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=C9F07_22105;partial=true;product=hypothetical protein;protein_id=TGD55552.1;transl_table=11 ##sequence-region PYKI01001495.1 1 2290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001495.1 Genbank region 1 2290 . + . ID=PYKI01001495.1:1..2290;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001495.1 Genbank gene 1 797 . - . ID=gene-C9F07_14230;Name=C9F07_14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14230;partial=true;start_range=.,1 PYKI01001495.1 Protein Homology CDS 1 797 . - 0 ID=cds-TGD78712.1;Parent=gene-C9F07_14230;Dbxref=NCBI_GP:TGD78712.1;Name=TGD78712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001612736.1;locus_tag=C9F07_14230;partial=true;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=TGD78712.1;start_range=.,1;transl_table=11 PYKI01001495.1 Genbank pseudogene 1296 1376 . - . ID=gene-C9F07_14235;Name=C9F07_14235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14235;pseudo=true PYKI01001495.1 Protein Homology CDS 1296 1376 . - 0 ID=cds-C9F07_14235;Parent=gene-C9F07_14235;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558264.1;locus_tag=C9F07_14235;product=IS1 family transposase;pseudo=true;transl_table=11 PYKI01001495.1 Genbank gene 1397 2290 . - . ID=gene-C9F07_14240;Name=C9F07_14240;end_range=2290,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14240;partial=true PYKI01001495.1 Protein Homology CDS 1397 2290 . - 0 ID=cds-TGD78713.1;Parent=gene-C9F07_14240;Dbxref=NCBI_GP:TGD78713.1;Name=TGD78713.1;end_range=2290,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=C9F07_14240;partial=true;product=hypothetical protein;protein_id=TGD78713.1;transl_table=11 ##sequence-region PYKI01002043.1 1 2287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002043.1 Genbank region 1 2287 . + . ID=PYKI01002043.1:1..2287;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002043.1 Genbank gene 290 973 . + . ID=gene-C9F07_19760;Name=C9F07_19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19760 PYKI01002043.1 Protein Homology CDS 290 973 . + 0 ID=cds-TGD59984.1;Parent=gene-C9F07_19760;Dbxref=NCBI_GP:TGD59984.1;Name=TGD59984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462590.1;locus_tag=C9F07_19760;product=hypothetical protein;protein_id=TGD59984.1;transl_table=11 PYKI01002043.1 Genbank gene 1017 2287 . + . ID=gene-C9F07_19765;Name=sadA;end_range=2287,.;gbkey=Gene;gene=sadA;gene_biotype=protein_coding;locus_tag=C9F07_19765;partial=true PYKI01002043.1 Protein Homology CDS 1017 2287 . + 0 ID=cds-TGD59985.1;Parent=gene-C9F07_19765;Dbxref=NCBI_GP:TGD59985.1;Name=TGD59985.1;end_range=2287,.;gbkey=CDS;gene=sadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=C9F07_19765;partial=true;product=autotransporter adhesin SadA;protein_id=TGD59985.1;transl_table=11 ##sequence-region PYKI01001833.1 1 2287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001833.1 Genbank region 1 2287 . + . ID=PYKI01001833.1:1..2287;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001833.1 Genbank gene 1 908 . + . ID=gene-C9F07_17630;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=C9F07_17630;partial=true;start_range=.,1 PYKI01001833.1 Protein Homology CDS 1 908 . + 2 ID=cds-TGD64272.1;Parent=gene-C9F07_17630;Dbxref=NCBI_GP:TGD64272.1;Name=TGD64272.1;gbkey=CDS;gene=ilvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=C9F07_17630;partial=true;product=threonine ammonia-lyase%2C biosynthetic;protein_id=TGD64272.1;start_range=.,1;transl_table=11 PYKI01001833.1 Genbank pseudogene 1145 1506 . + . ID=gene-C9F07_17635;Name=C9F07_17635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17635;pseudo=true PYKI01001833.1 Protein Homology CDS 1145 1506 . + 0 ID=cds-C9F07_17635;Parent=gene-C9F07_17635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457842.1;locus_tag=C9F07_17635;product=cytoplasmic protein;pseudo=true;transl_table=11 PYKI01001833.1 Genbank gene 1503 1844 . + . ID=gene-C9F07_17640;Name=C9F07_17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17640 PYKI01001833.1 Protein Homology CDS 1503 1844 . + 0 ID=cds-TGD64273.1;Parent=gene-C9F07_17640;Dbxref=NCBI_GP:TGD64273.1;Name=TGD64273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=C9F07_17640;product=XRE family transcriptional regulator;protein_id=TGD64273.1;transl_table=11 PYKI01001833.1 Genbank pseudogene 1847 2227 . - . ID=gene-C9F07_17645;Name=C9F07_17645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17645;pseudo=true PYKI01001833.1 Protein Homology CDS 1847 2227 . - 0 ID=cds-C9F07_17645;Parent=gene-C9F07_17645;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457840.1;locus_tag=C9F07_17645;product=HTH-type transcriptional activator IlvY;pseudo=true;transl_table=11 ##sequence-region PYKI01001772.1 1 2286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001772.1 Genbank region 1 2286 . + . ID=PYKI01001772.1:1..2286;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001772.1 Genbank gene 1 220 . - . ID=gene-C9F07_17020;Name=C9F07_17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17020;partial=true;start_range=.,1 PYKI01001772.1 Protein Homology CDS 1 220 . - 0 ID=cds-TGD66966.1;Parent=gene-C9F07_17020;Dbxref=NCBI_GP:TGD66966.1;Name=TGD66966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=C9F07_17020;partial=true;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=TGD66966.1;start_range=.,1;transl_table=11 PYKI01001772.1 Genbank gene 191 877 . + . ID=gene-C9F07_17025;Name=C9F07_17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17025 PYKI01001772.1 Protein Homology CDS 191 877 . + 0 ID=cds-TGD66964.1;Parent=gene-C9F07_17025;Dbxref=NCBI_GP:TGD66964.1;Name=TGD66964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455102.1;locus_tag=C9F07_17025;product=ABC transporter ATP-binding protein;protein_id=TGD66964.1;transl_table=11 PYKI01001772.1 Genbank gene 874 2286 . + . ID=gene-C9F07_17030;Name=C9F07_17030;end_range=2286,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17030;partial=true PYKI01001772.1 Protein Homology CDS 874 2286 . + 0 ID=cds-TGD66965.1;Parent=gene-C9F07_17030;Dbxref=NCBI_GP:TGD66965.1;Name=TGD66965.1;end_range=2286,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=C9F07_17030;partial=true;product=ABC transporter permease;protein_id=TGD66965.1;transl_table=11 ##sequence-region PYKI01001274.1 1 2284 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001274.1 Genbank region 1 2284 . + . ID=PYKI01001274.1:1..2284;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001274.1 Genbank gene 52 657 . + . ID=gene-C9F07_11910;Name=C9F07_11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11910 PYKI01001274.1 Protein Homology CDS 52 657 . + 0 ID=cds-TGD88697.1;Parent=gene-C9F07_11910;Dbxref=NCBI_GP:TGD88697.1;Name=TGD88697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000031374.1;locus_tag=C9F07_11910;product=recombinase;protein_id=TGD88697.1;transl_table=11 PYKI01001274.1 Genbank gene 657 1040 . + . ID=gene-C9F07_11915;Name=C9F07_11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11915 PYKI01001274.1 Protein Homology CDS 657 1040 . + 0 ID=cds-TGD88698.1;Parent=gene-C9F07_11915;Dbxref=NCBI_GP:TGD88698.1;Name=TGD88698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000951334.1;locus_tag=C9F07_11915;product=hypothetical protein;protein_id=TGD88698.1;transl_table=11 PYKI01001274.1 Genbank gene 1064 1357 . + . ID=gene-C9F07_11920;Name=C9F07_11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11920 PYKI01001274.1 Protein Homology CDS 1064 1357 . + 0 ID=cds-TGD88699.1;Parent=gene-C9F07_11920;Dbxref=NCBI_GP:TGD88699.1;Name=TGD88699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001111279.1;locus_tag=C9F07_11920;product=RecBCD nuclease inhibitor;protein_id=TGD88699.1;transl_table=11 PYKI01001274.1 Genbank gene 1368 1535 . + . ID=gene-C9F07_11925;Name=C9F07_11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11925 PYKI01001274.1 Protein Homology CDS 1368 1535 . + 0 ID=cds-TGD88701.1;Parent=gene-C9F07_11925;Dbxref=NCBI_GP:TGD88701.1;Name=TGD88701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001544363.1;locus_tag=C9F07_11925;product=DUF2737 domain-containing protein;protein_id=TGD88701.1;transl_table=11 PYKI01001274.1 Genbank gene 1532 1831 . + . ID=gene-C9F07_11930;Name=C9F07_11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11930 PYKI01001274.1 Protein Homology CDS 1532 1831 . + 0 ID=cds-TGD88700.1;Parent=gene-C9F07_11930;Dbxref=NCBI_GP:TGD88700.1;Name=TGD88700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000118152.1;locus_tag=C9F07_11930;product=hypothetical protein;protein_id=TGD88700.1;transl_table=11 PYKI01001274.1 Genbank pseudogene 1833 2216 . + . ID=gene-C9F07_11935;Name=C9F07_11935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11935;pseudo=true PYKI01001274.1 Protein Homology CDS 1833 2216 . + 0 ID=cds-C9F07_11935;Parent=gene-C9F07_11935;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835578.1;locus_tag=C9F07_11935;product=DUF551 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002501.1 1 5117 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002501.1 Genbank region 1 5117 . + . ID=PYKI01002501.1:1..5117;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002501.1 Genbank gene 1 111 . + . ID=gene-C9F07_24745;Name=C9F07_24745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24745;partial=true;start_range=.,1 PYKI01002501.1 Protein Homology CDS 1 111 . + 0 ID=cds-TGD50268.1;Parent=gene-C9F07_24745;Dbxref=NCBI_GP:TGD50268.1;Name=TGD50268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456293.1;locus_tag=C9F07_24745;partial=true;product=aminoacyl-tRNA hydrolase;protein_id=TGD50268.1;start_range=.,1;transl_table=11 PYKI01002501.1 Genbank gene 228 1319 . + . ID=gene-C9F07_24750;Name=C9F07_24750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24750 PYKI01002501.1 Protein Homology CDS 228 1319 . + 0 ID=cds-TGD50269.1;Parent=gene-C9F07_24750;Dbxref=NCBI_GP:TGD50269.1;Name=TGD50269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=C9F07_24750;product=redox-regulated ATPase YchF;protein_id=TGD50269.1;transl_table=11 PYKI01002501.1 Genbank gene 1478 2743 . - . ID=gene-C9F07_24755;Name=C9F07_24755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24755 PYKI01002501.1 Protein Homology CDS 1478 2743 . - 0 ID=cds-TGD50270.1;Parent=gene-C9F07_24755;Dbxref=NCBI_GP:TGD50270.1;Name=TGD50270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460741.1;locus_tag=C9F07_24755;product=DUF4427 domain-containing protein;protein_id=TGD50270.1;transl_table=11 PYKI01002501.1 Genbank gene 3237 4355 . + . ID=gene-C9F07_24760;Name=C9F07_24760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24760 PYKI01002501.1 Protein Homology CDS 3237 4355 . + 0 ID=cds-TGD50272.1;Parent=gene-C9F07_24760;Dbxref=NCBI_GP:TGD50272.1;Name=TGD50272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=C9F07_24760;product=[Ni/Fe] hydrogenase small subunit;protein_id=TGD50272.1;transl_table=11 PYKI01002501.1 Genbank gene 4352 5117 . + . ID=gene-C9F07_24765;Name=C9F07_24765;end_range=5117,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24765;partial=true PYKI01002501.1 Protein Homology CDS 4352 5117 . + 0 ID=cds-TGD50271.1;Parent=gene-C9F07_24765;Dbxref=NCBI_GP:TGD50271.1;Name=TGD50271.1;end_range=5117,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456296.1;locus_tag=C9F07_24765;partial=true;product=hydrogenase 2 large subunit;protein_id=TGD50271.1;transl_table=11 ##sequence-region PYKI01002599.1 1 2278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002599.1 Genbank region 1 2278 . + . ID=PYKI01002599.1:1..2278;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002599.1 Genbank gene 1 420 . + . ID=gene-C9F07_25805;Name=C9F07_25805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25805;partial=true;start_range=.,1 PYKI01002599.1 Protein Homology CDS 1 420 . + 0 ID=cds-TGD49629.1;Parent=gene-C9F07_25805;Dbxref=NCBI_GP:TGD49629.1;Name=TGD49629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416852.1;locus_tag=C9F07_25805;partial=true;product=glycosyltransferase;protein_id=TGD49629.1;start_range=.,1;transl_table=11 PYKI01002599.1 Genbank gene 815 1135 . - . ID=gene-C9F07_25810;Name=C9F07_25810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25810 PYKI01002599.1 GeneMarkS+ CDS 815 1135 . - 0 ID=cds-TGD49630.1;Parent=gene-C9F07_25810;Dbxref=NCBI_GP:TGD49630.1;Name=TGD49630.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F07_25810;product=hypothetical protein;protein_id=TGD49630.1;transl_table=11 PYKI01002599.1 Genbank gene 1134 2045 . + . ID=gene-C9F07_25815;Name=C9F07_25815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25815 PYKI01002599.1 GeneMarkS+ CDS 1134 2045 . + 0 ID=cds-TGD49631.1;Parent=gene-C9F07_25815;Dbxref=NCBI_GP:TGD49631.1;Name=TGD49631.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F07_25815;product=hypothetical protein;protein_id=TGD49631.1;transl_table=11 ##sequence-region PYKI01003021.1 1 2278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003021.1 Genbank region 1 2278 . + . ID=PYKI01003021.1:1..2278;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003021.1 Genbank gene 1 394 . + . ID=gene-C9F07_30300;Name=C9F07_30300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30300;partial=true;start_range=.,1 PYKI01003021.1 Protein Homology CDS 1 394 . + 1 ID=cds-TGD41130.1;Parent=gene-C9F07_30300;Dbxref=NCBI_GP:TGD41130.1;Name=TGD41130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456469.1;locus_tag=C9F07_30300;partial=true;product=hydrolase;protein_id=TGD41130.1;start_range=.,1;transl_table=11 PYKI01003021.1 Genbank gene 391 1209 . + . ID=gene-C9F07_30305;Name=C9F07_30305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30305 PYKI01003021.1 Protein Homology CDS 391 1209 . + 0 ID=cds-TGD41131.1;Parent=gene-C9F07_30305;Dbxref=NCBI_GP:TGD41131.1;Name=TGD41131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456470.1;locus_tag=C9F07_30305;product=DUF72 domain-containing protein;protein_id=TGD41131.1;transl_table=11 PYKI01003021.1 Genbank gene 1262 1657 . + . ID=gene-C9F07_30310;Name=C9F07_30310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30310 PYKI01003021.1 Protein Homology CDS 1262 1657 . + 0 ID=cds-TGD41132.1;Parent=gene-C9F07_30310;Dbxref=NCBI_GP:TGD41132.1;Name=TGD41132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456471.1;locus_tag=C9F07_30310;product=hypothetical protein;protein_id=TGD41132.1;transl_table=11 PYKI01003021.1 Genbank gene 1698 2278 . + . ID=gene-C9F07_30315;Name=C9F07_30315;end_range=2278,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30315;partial=true PYKI01003021.1 Protein Homology CDS 1698 2278 . + 0 ID=cds-TGD41133.1;Parent=gene-C9F07_30315;Dbxref=NCBI_GP:TGD41133.1;Name=TGD41133.1;end_range=2278,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456472.1;locus_tag=C9F07_30315;partial=true;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=TGD41133.1;transl_table=11 ##sequence-region PYKI01001043.1 1 2277 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001043.1 Genbank region 1 2277 . + . ID=PYKI01001043.1:1..2277;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001043.1 Genbank gene 1 329 . - . ID=gene-C9F07_09605;Name=C9F07_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09605;partial=true;start_range=.,1 PYKI01001043.1 Protein Homology CDS 1 329 . - 0 ID=cds-TGD96690.1;Parent=gene-C9F07_09605;Dbxref=NCBI_GP:TGD96690.1;Name=TGD96690.1;Note=with GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol%3B subunit IIC forms the translocation channel and contains the substrate binding site;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458155.1;locus_tag=C9F07_09605;partial=true;product=PTS galactitol transporter subunit IIC;protein_id=TGD96690.1;start_range=.,1;transl_table=11 PYKI01001043.1 Genbank gene 406 693 . - . ID=gene-C9F07_09610;Name=C9F07_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09610 PYKI01001043.1 Protein Homology CDS 406 693 . - 0 ID=cds-TGD96691.1;Parent=gene-C9F07_09610;Dbxref=NCBI_GP:TGD96691.1;Name=TGD96691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458154.1;locus_tag=C9F07_09610;product=PTS sugar transporter subunit IIB;protein_id=TGD96691.1;transl_table=11 PYKI01001043.1 Genbank gene 690 1163 . - . ID=gene-C9F07_09615;Name=C9F07_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09615 PYKI01001043.1 Protein Homology CDS 690 1163 . - 0 ID=cds-TGD96692.1;Parent=gene-C9F07_09615;Dbxref=NCBI_GP:TGD96692.1;Name=TGD96692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462683.1;locus_tag=C9F07_09615;product=PTS suar transporter subunit IIA;protein_id=TGD96692.1;transl_table=11 PYKI01001043.1 Genbank gene 1181 1924 . - . ID=gene-C9F07_09620;Name=C9F07_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09620 PYKI01001043.1 Protein Homology CDS 1181 1924 . - 0 ID=cds-TGD96693.1;Parent=gene-C9F07_09620;Dbxref=NCBI_GP:TGD96693.1;Name=TGD96693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458152.1;locus_tag=C9F07_09620;product=GntR family transcriptional regulator;protein_id=TGD96693.1;transl_table=11 ##sequence-region PYKI01000741.1 1 2277 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000741.1 Genbank region 1 2277 . + . ID=PYKI01000741.1:1..2277;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000741.1 Genbank gene 1 761 . - . ID=gene-C9F07_06520;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=C9F07_06520;partial=true;start_range=.,1 PYKI01000741.1 Protein Homology CDS 1 761 . - 0 ID=cds-TGE10771.1;Parent=gene-C9F07_06520;Dbxref=NCBI_GP:TGE10771.1;Name=TGE10771.1;gbkey=CDS;gene=phnS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=C9F07_06520;partial=true;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=TGE10771.1;start_range=.,1;transl_table=11 PYKI01000741.1 Genbank gene 959 1678 . - . ID=gene-C9F07_06525;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=C9F07_06525 PYKI01000741.1 Protein Homology CDS 959 1678 . - 0 ID=cds-TGE10772.1;Parent=gene-C9F07_06525;Dbxref=NCBI_GP:TGE10772.1;Name=TGE10772.1;gbkey=CDS;gene=phnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455024.1;locus_tag=C9F07_06525;product=phosphonate utilization transcriptional regulator PhnR;protein_id=TGE10772.1;transl_table=11 PYKI01000741.1 Genbank gene 1818 2277 . + . ID=gene-C9F07_06530;Name=C9F07_06530;end_range=2277,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06530;partial=true PYKI01000741.1 Protein Homology CDS 1818 2277 . + 0 ID=cds-TGE10773.1;Parent=gene-C9F07_06530;Dbxref=NCBI_GP:TGE10773.1;Name=TGE10773.1;Note=catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate;end_range=2277,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=C9F07_06530;partial=true;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=TGE10773.1;transl_table=11 ##sequence-region PYKI01000810.1 1 2275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000810.1 Genbank region 1 2275 . + . ID=PYKI01000810.1:1..2275;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000810.1 Genbank gene 1 591 . - . ID=gene-C9F07_07300;Name=C9F07_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07300;partial=true;start_range=.,1 PYKI01000810.1 Protein Homology CDS 1 591 . - 0 ID=cds-TGE08873.1;Parent=gene-C9F07_07300;Dbxref=NCBI_GP:TGE08873.1;Name=TGE08873.1;Note=Catalyzes a key regulatory step in fatty acid biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=C9F07_07300;partial=true;product=enoyl-[acyl-carrier-protein] reductase FabI;protein_id=TGE08873.1;start_range=.,1;transl_table=11 PYKI01000810.1 Genbank gene 709 1008 . - . ID=gene-C9F07_07305;Name=C9F07_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07305 PYKI01000810.1 Protein Homology CDS 709 1008 . - 0 ID=cds-TGE08874.1;Parent=gene-C9F07_07305;Dbxref=NCBI_GP:TGE08874.1;Name=TGE08874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=C9F07_07305;product=hypothetical protein;protein_id=TGE08874.1;transl_table=11 PYKI01000810.1 Genbank gene 983 1162 . - . ID=gene-C9F07_07310;Name=C9F07_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07310 PYKI01000810.1 Protein Homology CDS 983 1162 . - 0 ID=cds-TGE08875.1;Parent=gene-C9F07_07310;Dbxref=NCBI_GP:TGE08875.1;Name=TGE08875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=C9F07_07310;product=hypothetical protein;protein_id=TGE08875.1;transl_table=11 PYKI01000810.1 Genbank gene 1197 2275 . + . ID=gene-C9F07_07315;Name=C9F07_07315;end_range=2275,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07315;partial=true PYKI01000810.1 Protein Homology CDS 1197 2275 . + 0 ID=cds-TGE08876.1;Parent=gene-C9F07_07315;Dbxref=NCBI_GP:TGE08876.1;Name=TGE08876.1;end_range=2275,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455798.1;locus_tag=C9F07_07315;partial=true;product=Secreted effector kinase SteC;protein_id=TGE08876.1;transl_table=11 ##sequence-region PYKI01000399.1 1 2275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000399.1 Genbank region 1 2275 . + . ID=PYKI01000399.1:1..2275;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000399.1 Genbank gene 1 387 . + . ID=gene-C9F07_03030;Name=C9F07_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03030;partial=true;start_range=.,1 PYKI01000399.1 Protein Homology CDS 1 387 . + 0 ID=cds-TGE22767.1;Parent=gene-C9F07_03030;Dbxref=NCBI_GP:TGE22767.1;Name=TGE22767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=C9F07_03030;partial=true;product=hypothetical protein;protein_id=TGE22767.1;start_range=.,1;transl_table=11 PYKI01000399.1 Genbank gene 536 1666 . + . ID=gene-C9F07_03035;Name=C9F07_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03035 PYKI01000399.1 Protein Homology CDS 536 1666 . + 0 ID=cds-TGE22768.1;Parent=gene-C9F07_03035;Dbxref=NCBI_GP:TGE22768.1;Name=TGE22768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=C9F07_03035;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=TGE22768.1;transl_table=11 PYKI01000399.1 Genbank gene 1666 1920 . + . ID=gene-C9F07_03040;Name=C9F07_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03040 PYKI01000399.1 Protein Homology CDS 1666 1920 . + 0 ID=cds-TGE22769.1;Parent=gene-C9F07_03040;Dbxref=NCBI_GP:TGE22769.1;Name=TGE22769.1;Note=plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor%2C essential for nucleotide reduction catalyzed by ribonucleotide reductases;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456822.1;locus_tag=C9F07_03040;product=2Fe-2S ferredoxin-like protein;protein_id=TGE22769.1;transl_table=11 PYKI01000399.1 Genbank gene 1922 2275 . - . ID=gene-C9F07_03045;Name=C9F07_03045;end_range=2275,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03045;partial=true PYKI01000399.1 Protein Homology CDS 1922 2275 . - 0 ID=cds-TGE22770.1;Parent=gene-C9F07_03045;Dbxref=NCBI_GP:TGE22770.1;Name=TGE22770.1;end_range=2275,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456823.1;locus_tag=C9F07_03045;partial=true;product=MFS transporter;protein_id=TGE22770.1;transl_table=11 ##sequence-region PYKI01002494.1 1 2274 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002494.1 Genbank region 1 2274 . + . ID=PYKI01002494.1:1..2274;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002494.1 Genbank gene 1 633 . - . ID=gene-C9F07_24675;Name=C9F07_24675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24675;partial=true;start_range=.,1 PYKI01002494.1 Protein Homology CDS 1 633 . - 0 ID=cds-TGD50337.1;Parent=gene-C9F07_24675;Dbxref=NCBI_GP:TGD50337.1;Name=TGD50337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459146.1;locus_tag=C9F07_24675;partial=true;product=GMP reductase;protein_id=TGD50337.1;start_range=.,1;transl_table=11 PYKI01002494.1 Genbank gene 859 1479 . + . ID=gene-C9F07_24680;Name=C9F07_24680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24680 PYKI01002494.1 Protein Homology CDS 859 1479 . + 0 ID=cds-TGD50338.1;Parent=gene-C9F07_24680;Dbxref=NCBI_GP:TGD50338.1;Name=TGD50338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454754.1;locus_tag=C9F07_24680;product=dephospho-CoA kinase;protein_id=TGD50338.1;transl_table=11 PYKI01002494.1 Genbank gene 1479 2222 . + . ID=gene-C9F07_24685;Name=C9F07_24685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24685 PYKI01002494.1 Protein Homology CDS 1479 2222 . + 0 ID=cds-TGD50339.1;Parent=gene-C9F07_24685;Dbxref=NCBI_GP:TGD50339.1;Name=TGD50339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454753.1;locus_tag=C9F07_24685;product=cell division protein ZapD;protein_id=TGD50339.1;transl_table=11 ##sequence-region PYKI01003131.1 1 2274 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003131.1 Genbank region 1 2274 . + . ID=PYKI01003131.1:1..2274;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003131.1 Genbank gene 1 973 . + . ID=gene-C9F07_31345;Name=C9F07_31345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31345;partial=true;start_range=.,1 PYKI01003131.1 Protein Homology CDS 1 973 . + 1 ID=cds-TGD38947.1;Parent=gene-C9F07_31345;Dbxref=NCBI_GP:TGD38947.1;Name=TGD38947.1;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454772.1;locus_tag=C9F07_31345;partial=true;product=aconitate hydratase B;protein_id=TGD38947.1;start_range=.,1;transl_table=11 PYKI01003131.1 Genbank gene 1162 1524 . + . ID=gene-C9F07_31350;Name=C9F07_31350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31350 PYKI01003131.1 Protein Homology CDS 1162 1524 . + 0 ID=cds-TGD38948.1;Parent=gene-C9F07_31350;Dbxref=NCBI_GP:TGD38948.1;Name=TGD38948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=C9F07_31350;product=hypothetical protein;protein_id=TGD38948.1;transl_table=11 PYKI01003131.1 Genbank gene 1758 2274 . + . ID=gene-C9F07_31355;Name=C9F07_31355;end_range=2274,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31355;partial=true PYKI01003131.1 Protein Homology CDS 1758 2274 . + 0 ID=cds-TGD38949.1;Parent=gene-C9F07_31355;Dbxref=NCBI_GP:TGD38949.1;Name=TGD38949.1;end_range=2274,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454774.1;locus_tag=C9F07_31355;partial=true;product=2-keto-3-deoxygluconate permease 1;protein_id=TGD38949.1;transl_table=11 ##sequence-region PYKI01003170.1 1 2273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003170.1 Genbank region 1 2273 . + . ID=PYKI01003170.1:1..2273;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003170.1 Genbank gene 1 1914 . + . ID=gene-C9F07_31815;Name=C9F07_31815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31815;partial=true;start_range=.,1 PYKI01003170.1 Protein Homology CDS 1 1914 . + 0 ID=cds-TGD37980.1;Parent=gene-C9F07_31815;Dbxref=NCBI_GP:TGD37980.1;Name=TGD37980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=C9F07_31815;partial=true;product=diguanylate cyclase;protein_id=TGD37980.1;start_range=.,1;transl_table=11 PYKI01003170.1 Genbank gene 1882 2273 . - . ID=gene-C9F07_31820;Name=C9F07_31820;end_range=2273,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31820;partial=true PYKI01003170.1 Protein Homology CDS 1882 2273 . - 2 ID=cds-TGD37981.1;Parent=gene-C9F07_31820;Dbxref=NCBI_GP:TGD37981.1;Name=TGD37981.1;end_range=2273,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=C9F07_31820;partial=true;product=DNA-3-methyladenine glycosylase 2;protein_id=TGD37981.1;transl_table=11 ##sequence-region PYKI01003452.1 1 5095 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003452.1 Genbank region 1 5095 . + . ID=PYKI01003452.1:1..5095;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003452.1 Genbank gene 1 697 . - . ID=gene-C9F07_34700;Name=C9F07_34700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34700;partial=true;start_range=.,1 PYKI01003452.1 Protein Homology CDS 1 697 . - 0 ID=cds-TGD33389.1;Parent=gene-C9F07_34700;Dbxref=NCBI_GP:TGD33389.1;Name=TGD33389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=C9F07_34700;partial=true;product=beta-N-acetylhexosaminidase;protein_id=TGD33389.1;start_range=.,1;transl_table=11 PYKI01003452.1 Genbank gene 708 1532 . - . ID=gene-C9F07_34705;Name=C9F07_34705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34705 PYKI01003452.1 Protein Homology CDS 708 1532 . - 0 ID=cds-TGD33386.1;Parent=gene-C9F07_34705;Dbxref=NCBI_GP:TGD33386.1;Name=TGD33386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=C9F07_34705;product=thiamine kinase;protein_id=TGD33386.1;transl_table=11 PYKI01003452.1 Genbank gene 1513 2151 . - . ID=gene-C9F07_34710;Name=C9F07_34710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34710 PYKI01003452.1 Protein Homology CDS 1513 2151 . - 0 ID=cds-TGD33387.1;Parent=gene-C9F07_34710;Dbxref=NCBI_GP:TGD33387.1;Name=TGD33387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=C9F07_34710;product=penicillin-binding protein activator LpoB;protein_id=TGD33387.1;transl_table=11 PYKI01003452.1 Genbank gene 2165 2539 . - . ID=gene-C9F07_34715;Name=C9F07_34715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34715 PYKI01003452.1 Protein Homology CDS 2165 2539 . - 0 ID=cds-TGD33388.1;Parent=gene-C9F07_34715;Dbxref=NCBI_GP:TGD33388.1;Name=TGD33388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=C9F07_34715;product=DUF1425 domain-containing protein;protein_id=TGD33388.1;transl_table=11 PYKI01003452.1 Genbank gene 2542 2901 . - . ID=gene-C9F07_34720;Name=C9F07_34720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34720 PYKI01003452.1 Protein Homology CDS 2542 2901 . - 0 ID=cds-TGD33390.1;Parent=gene-C9F07_34720;Dbxref=NCBI_GP:TGD33390.1;Name=TGD33390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455697.1;locus_tag=C9F07_34720;product=histidine triad nucleotide-binding protein;protein_id=TGD33390.1;transl_table=11 PYKI01003452.1 Genbank gene 3243 5095 . + . ID=gene-C9F07_34725;Name=C9F07_34725;end_range=5095,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34725;partial=true PYKI01003452.1 Protein Homology CDS 3243 5095 . + 0 ID=cds-TGD33391.1;Parent=gene-C9F07_34725;Dbxref=NCBI_GP:TGD33391.1;Name=TGD33391.1;end_range=5095,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=C9F07_34725;partial=true;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=TGD33391.1;transl_table=11 ##sequence-region PYKI01001825.1 1 2269 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001825.1 Genbank region 1 2269 . + . ID=PYKI01001825.1:1..2269;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001825.1 Genbank pseudogene 1 697 . - . ID=gene-C9F07_17545;Name=minD;gbkey=Gene;gene=minD;gene_biotype=pseudogene;locus_tag=C9F07_17545;pseudo=true PYKI01001825.1 Protein Homology CDS 1 697 . - 0 ID=cds-C9F07_17545;Parent=gene-C9F07_17545;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=C9F07_17545;product=septum site-determining protein MinD;pseudo=true;transl_table=11 PYKI01001825.1 Genbank gene 721 1428 . - . ID=gene-C9F07_17550;Name=C9F07_17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17550 PYKI01001825.1 Protein Homology CDS 721 1428 . - 0 ID=cds-TGD64368.1;Parent=gene-C9F07_17550;Dbxref=NCBI_GP:TGD64368.1;Name=TGD64368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456321.1;locus_tag=C9F07_17550;product=septum site-determining protein MinC;protein_id=TGD64368.1;transl_table=11 PYKI01001825.1 Genbank gene 1515 1847 . + . ID=gene-C9F07_17555;Name=C9F07_17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17555 PYKI01001825.1 Protein Homology CDS 1515 1847 . + 0 ID=cds-TGD64369.1;Parent=gene-C9F07_17555;Dbxref=NCBI_GP:TGD64369.1;Name=TGD64369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456320.1;locus_tag=C9F07_17555;product=hypothetical protein;protein_id=TGD64369.1;transl_table=11 PYKI01001825.1 Genbank pseudogene 1897 2232 . + . ID=gene-C9F07_17560;Name=C9F07_17560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_17560;pseudo=true PYKI01001825.1 Protein Homology CDS 1897 2232 . + 0 ID=cds-C9F07_17560;Parent=gene-C9F07_17560;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456319.1;locus_tag=C9F07_17560;product=fumarylacetoacetate hydrolase family protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000309.1 1 2266 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000309.1 Genbank region 1 2266 . + . ID=PYKI01000309.1:1..2266;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000309.1 Genbank gene 124 1470 . + . ID=gene-C9F07_02100;Name=C9F07_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02100 PYKI01000309.1 Protein Homology CDS 124 1470 . + 0 ID=cds-TGE27778.1;Parent=gene-C9F07_02100;Dbxref=NCBI_GP:TGE27778.1;Name=TGE27778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454937.1;locus_tag=C9F07_02100;product=fimbrial protein;protein_id=TGE27778.1;transl_table=11 ##sequence-region PYKI01002861.1 1 2263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002861.1 Genbank region 1 2263 . + . ID=PYKI01002861.1:1..2263;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002861.1 Genbank gene 39 1169 . - . ID=gene-C9F07_28660;Name=C9F07_28660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28660 PYKI01002861.1 Protein Homology CDS 39 1169 . - 0 ID=cds-TGD44969.1;Parent=gene-C9F07_28660;Dbxref=NCBI_GP:TGD44969.1;Name=TGD44969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=C9F07_28660;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=TGD44969.1;transl_table=11 PYKI01002861.1 Genbank gene 1225 2241 . - . ID=gene-C9F07_28665;Name=C9F07_28665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28665 PYKI01002861.1 Protein Homology CDS 1225 2241 . - 0 ID=cds-TGD44970.1;Parent=gene-C9F07_28665;Dbxref=NCBI_GP:TGD44970.1;Name=TGD44970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418232.2;locus_tag=C9F07_28665;product=ECA polysaccharide chain length modulation protein;protein_id=TGD44970.1;transl_table=11 ##sequence-region PYKI01001154.1 1 2263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001154.1 Genbank region 1 2263 . + . ID=PYKI01001154.1:1..2263;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001154.1 Genbank gene 130 1554 . - . ID=gene-C9F07_10775;Name=C9F07_10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10775 PYKI01001154.1 Protein Homology CDS 130 1554 . - 0 ID=cds-TGD93580.1;Parent=gene-C9F07_10775;Dbxref=NCBI_GP:TGD93580.1;Name=TGD93580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=C9F07_10775;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=TGD93580.1;transl_table=11 PYKI01001154.1 Genbank gene 1698 2263 . + . ID=gene-C9F07_10780;Name=ubiF;end_range=2263,.;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;gene_synonym=yleB;locus_tag=C9F07_10780;partial=true PYKI01001154.1 Protein Homology CDS 1698 2263 . + 0 ID=cds-TGD93581.1;Parent=gene-C9F07_10780;Dbxref=NCBI_GP:TGD93581.1;Name=TGD93581.1;Note=catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q;end_range=2263,.;gbkey=CDS;gene=ubiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455240.1;locus_tag=C9F07_10780;partial=true;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=TGD93581.1;transl_table=11 ##sequence-region PYKI01003465.1 1 2262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003465.1 Genbank region 1 2262 . + . ID=PYKI01003465.1:1..2262;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003465.1 Genbank gene 462 584 . + . ID=gene-C9F07_34835;Name=C9F07_34835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34835 PYKI01003465.1 Protein Homology CDS 462 584 . + 0 ID=cds-TGD32915.1;Parent=gene-C9F07_34835;Dbxref=NCBI_GP:TGD32915.1;Name=TGD32915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=C9F07_34835;product=hypothetical protein;protein_id=TGD32915.1;transl_table=11 PYKI01003465.1 Genbank gene 586 1251 . + . ID=gene-C9F07_34840;Name=C9F07_34840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34840 PYKI01003465.1 Protein Homology CDS 586 1251 . + 0 ID=cds-TGD32916.1;Parent=gene-C9F07_34840;Dbxref=NCBI_GP:TGD32916.1;Name=TGD32916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=C9F07_34840;product=hypothetical protein;protein_id=TGD32916.1;transl_table=11 PYKI01003465.1 Genbank gene 1316 2262 . - . ID=gene-C9F07_34845;Name=C9F07_34845;end_range=2262,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34845;partial=true PYKI01003465.1 Protein Homology CDS 1316 2262 . - 2 ID=cds-TGD32917.1;Parent=gene-C9F07_34845;Dbxref=NCBI_GP:TGD32917.1;Name=TGD32917.1;end_range=2262,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456765.1;locus_tag=C9F07_34845;partial=true;product=MFS transporter;protein_id=TGD32917.1;transl_table=11 ##sequence-region PYKI01002898.1 1 2260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002898.1 Genbank region 1 2260 . + . ID=PYKI01002898.1:1..2260;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002898.1 Genbank gene 1 713 . - . ID=gene-C9F07_29020;Name=C9F07_29020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29020;partial=true;start_range=.,1 PYKI01002898.1 Protein Homology CDS 1 713 . - 0 ID=cds-TGD43727.1;Parent=gene-C9F07_29020;Dbxref=NCBI_GP:TGD43727.1;Name=TGD43727.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043504.1;locus_tag=C9F07_29020;partial=true;product=phosphogluconate dehydrogenase (NADP(+)-dependent%2C decarboxylating);protein_id=TGD43727.1;start_range=.,1;transl_table=11 PYKI01002898.1 Genbank gene 843 1739 . - . ID=gene-C9F07_29025;Name=C9F07_29025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29025 PYKI01002898.1 Protein Homology CDS 843 1739 . - 0 ID=cds-TGD43728.1;Parent=gene-C9F07_29025;Dbxref=NCBI_GP:TGD43728.1;Name=TGD43728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000286640.1;locus_tag=C9F07_29025;product=alpha-1%2C2-fucosyltransferase;protein_id=TGD43728.1;transl_table=11 PYKI01002898.1 Genbank gene 1750 2260 . - . ID=gene-C9F07_29030;Name=C9F07_29030;end_range=2260,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29030;partial=true PYKI01002898.1 Protein Homology CDS 1750 2260 . - 1 ID=cds-TGD43729.1;Parent=gene-C9F07_29030;Dbxref=NCBI_GP:TGD43729.1;Name=TGD43729.1;end_range=2260,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000626463.1;locus_tag=C9F07_29030;partial=true;product=glycosyl transferase;protein_id=TGD43729.1;transl_table=11 ##sequence-region PYKI01002516.1 1 2257 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002516.1 Genbank region 1 2257 . + . ID=PYKI01002516.1:1..2257;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002516.1 Genbank pseudogene 58 849 . + . ID=gene-C9F07_24925;Name=C9F07_24925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24925;pseudo=true PYKI01002516.1 Protein Homology CDS 58 849 . + 0 ID=cds-C9F07_24925;Parent=gene-C9F07_24925;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458234.1;locus_tag=C9F07_24925;product=L-lactate permease;pseudo=true;transl_table=11 PYKI01002516.1 Genbank gene 846 1622 . + . ID=gene-C9F07_24930;Name=C9F07_24930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24930 PYKI01002516.1 Protein Homology CDS 846 1622 . + 0 ID=cds-TGD50154.1;Parent=gene-C9F07_24930;Dbxref=NCBI_GP:TGD50154.1;Name=TGD50154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=C9F07_24930;product=transcriptional regulator LldR;protein_id=TGD50154.1;transl_table=11 PYKI01002516.1 Genbank pseudogene 1619 2224 . + . ID=gene-C9F07_24935;Name=C9F07_24935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24935;pseudo=true PYKI01002516.1 Protein Homology CDS 1619 2224 . + 0 ID=cds-C9F07_24935;Parent=gene-C9F07_24935;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=C9F07_24935;product=L-lactate dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01003448.1 1 2254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003448.1 Genbank region 1 2254 . + . ID=PYKI01003448.1:1..2254;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003448.1 Genbank gene 558 2147 . + . ID=gene-C9F07_34665;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=C9F07_34665 PYKI01003448.1 Protein Homology CDS 558 2147 . + 0 ID=cds-TGD33403.1;Parent=gene-C9F07_34665;Dbxref=NCBI_GP:TGD33403.1;Name=TGD33403.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=C9F07_34665;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase;protein_id=TGD33403.1;transl_table=11 PYKI01003448.1 Genbank gene 2163 2254 . + . ID=gene-C9F07_34670;Name=C9F07_34670;end_range=2254,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34670;partial=true PYKI01003448.1 Protein Homology CDS 2163 2254 . + 0 ID=cds-TGD33404.1;Parent=gene-C9F07_34670;Dbxref=NCBI_GP:TGD33404.1;Name=TGD33404.1;end_range=2254,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457899.1;locus_tag=C9F07_34670;partial=true;product=hypothetical protein;protein_id=TGD33404.1;transl_table=11 ##sequence-region PYKI01001846.1 1 2254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001846.1 Genbank region 1 2254 . + . ID=PYKI01001846.1:1..2254;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001846.1 Genbank gene 1 145 . + . ID=gene-C9F07_17740;Name=C9F07_17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17740;partial=true;start_range=.,1 PYKI01001846.1 Protein Homology CDS 1 145 . + 1 ID=cds-TGD63775.1;Parent=gene-C9F07_17740;Dbxref=NCBI_GP:TGD63775.1;Name=TGD63775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457627.1;locus_tag=C9F07_17740;partial=true;product=serine dehydratase subunit alpha family protein;protein_id=TGD63775.1;start_range=.,1;transl_table=11 PYKI01001846.1 Genbank gene 258 422 . - . ID=gene-C9F07_17745;Name=C9F07_17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17745 PYKI01001846.1 Protein Homology CDS 258 422 . - 0 ID=cds-TGD63776.1;Parent=gene-C9F07_17745;Dbxref=NCBI_GP:TGD63776.1;Name=TGD63776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457626.1;locus_tag=C9F07_17745;product=hypothetical protein;protein_id=TGD63776.1;transl_table=11 PYKI01001846.1 Genbank gene 446 1147 . - . ID=gene-C9F07_17750;Name=C9F07_17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17750 PYKI01001846.1 Protein Homology CDS 446 1147 . - 0 ID=cds-TGD63777.1;Parent=gene-C9F07_17750;Dbxref=NCBI_GP:TGD63777.1;Name=TGD63777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457625.1;locus_tag=C9F07_17750;product=pirin family protein;protein_id=TGD63777.1;transl_table=11 PYKI01001846.1 Genbank gene 1252 2148 . + . ID=gene-C9F07_17755;Name=C9F07_17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17755 PYKI01001846.1 Protein Homology CDS 1252 2148 . + 0 ID=cds-TGD63778.1;Parent=gene-C9F07_17755;Dbxref=NCBI_GP:TGD63778.1;Name=TGD63778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=C9F07_17755;product=LysR family transcriptional regulator;protein_id=TGD63778.1;transl_table=11 ##sequence-region PYKI01002016.1 1 5064 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002016.1 Genbank region 1 5064 . + . ID=PYKI01002016.1:1..5064;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002016.1 Genbank gene 49 2409 . - . ID=gene-C9F07_19440;Name=C9F07_19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19440 PYKI01002016.1 Protein Homology CDS 49 2409 . - 0 ID=cds-TGD60088.1;Parent=gene-C9F07_19440;Dbxref=NCBI_GP:TGD60088.1;Name=TGD60088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457423.1;locus_tag=C9F07_19440;product=fimbrial protein;protein_id=TGD60088.1;transl_table=11 PYKI01002016.1 Genbank gene 2529 3239 . - . ID=gene-C9F07_19445;Name=C9F07_19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19445 PYKI01002016.1 Protein Homology CDS 2529 3239 . - 0 ID=cds-TGD60089.1;Parent=gene-C9F07_19445;Dbxref=NCBI_GP:TGD60089.1;Name=TGD60089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461946.3;locus_tag=C9F07_19445;product=fimbrial protein StdA;protein_id=TGD60089.1;transl_table=11 PYKI01002016.1 Genbank gene 3832 4464 . - . ID=gene-C9F07_19450;Name=C9F07_19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19450 PYKI01002016.1 Protein Homology CDS 3832 4464 . - 0 ID=cds-TGD60090.1;Parent=gene-C9F07_19450;Dbxref=NCBI_GP:TGD60090.1;Name=TGD60090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=C9F07_19450;product=hypothetical protein;protein_id=TGD60090.1;transl_table=11 PYKI01002016.1 Genbank gene 4511 5011 . - . ID=gene-C9F07_19455;Name=C9F07_19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19455 PYKI01002016.1 Protein Homology CDS 4511 5011 . - 0 ID=cds-TGD60091.1;Parent=gene-C9F07_19455;Dbxref=NCBI_GP:TGD60091.1;Name=TGD60091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=C9F07_19455;product=porin family protein;protein_id=TGD60091.1;transl_table=11 ##sequence-region PYKI01002749.1 1 2254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002749.1 Genbank region 1 2254 . + . ID=PYKI01002749.1:1..2254;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002749.1 Genbank gene 1 478 . - . ID=gene-C9F07_27440;Name=C9F07_27440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27440;partial=true;start_range=.,1 PYKI01002749.1 Protein Homology CDS 1 478 . - 0 ID=cds-TGD46976.1;Parent=gene-C9F07_27440;Dbxref=NCBI_GP:TGD46976.1;Name=TGD46976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=C9F07_27440;partial=true;product=two-component system response regulator ArcA;protein_id=TGD46976.1;start_range=.,1;transl_table=11 PYKI01002749.1 Genbank gene 574 714 . + . ID=gene-C9F07_27445;Name=C9F07_27445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27445 PYKI01002749.1 Protein Homology CDS 574 714 . + 0 ID=cds-TGD46977.1;Parent=gene-C9F07_27445;Dbxref=NCBI_GP:TGD46977.1;Name=TGD46977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459004.1;locus_tag=C9F07_27445;product=hypothetical protein;protein_id=TGD46977.1;transl_table=11 PYKI01002749.1 Genbank gene 1114 1782 . + . ID=gene-C9F07_27450;Name=C9F07_27450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27450 PYKI01002749.1 Protein Homology CDS 1114 1782 . + 0 ID=cds-TGD46978.1;Parent=gene-C9F07_27450;Dbxref=NCBI_GP:TGD46978.1;Name=TGD46978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=C9F07_27450;product=tRNA/rRNA methyltransferase;protein_id=TGD46978.1;transl_table=11 PYKI01002749.1 Genbank gene 2014 2079 . + . ID=gene-C9F07_27455;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=C9F07_27455 PYKI01002749.1 Protein Homology CDS 2014 2079 . + 0 ID=cds-TGD46979.1;Parent=gene-C9F07_27455;Dbxref=NCBI_GP:TGD46979.1;Name=TGD46979.1;gbkey=CDS;gene=thrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454611.1;locus_tag=C9F07_27455;product=thr operon leader peptide;protein_id=TGD46979.1;transl_table=11 ##sequence-region PYKI01000706.1 1 2250 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000706.1 Genbank region 1 2250 . + . ID=PYKI01000706.1:1..2250;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000706.1 Genbank gene 105 2250 . + . ID=gene-C9F07_06200;Name=sadA;end_range=2250,.;gbkey=Gene;gene=sadA;gene_biotype=protein_coding;locus_tag=C9F07_06200;partial=true PYKI01000706.1 Protein Homology CDS 105 2250 . + 0 ID=cds-TGE11308.1;Parent=gene-C9F07_06200;Dbxref=NCBI_GP:TGE11308.1;Name=TGE11308.1;end_range=2250,.;gbkey=CDS;gene=sadA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001570377.1;locus_tag=C9F07_06200;partial=true;product=autotransporter adhesin SadA;protein_id=TGE11308.1;transl_table=11 ##sequence-region PYKI01002243.1 1 2247 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002243.1 Genbank region 1 2247 . + . ID=PYKI01002243.1:1..2247;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002243.1 Genbank gene 1 132 . + . ID=gene-C9F07_21920;Name=C9F07_21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21920;partial=true;start_range=.,1 PYKI01002243.1 Protein Homology CDS 1 132 . + 0 ID=cds-TGD55959.1;Parent=gene-C9F07_21920;Dbxref=NCBI_GP:TGD55959.1;Name=TGD55959.1;Note=oxygen regulated%3B required for internalization into the host cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457263.1;locus_tag=C9F07_21920;partial=true;product=oxygen-regulated invasion protein OrgB;protein_id=TGD55959.1;start_range=.,1;transl_table=11 PYKI01002243.1 Genbank gene 148 600 . + . ID=gene-C9F07_21925;Name=C9F07_21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21925 PYKI01002243.1 Protein Homology CDS 148 600 . + 0 ID=cds-TGD55960.1;Parent=gene-C9F07_21925;Dbxref=NCBI_GP:TGD55960.1;Name=TGD55960.1;Note=expressed during and after host cell invasion;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457262.1;locus_tag=C9F07_21925;product=type III secretion system effector protein OrgC;protein_id=TGD55960.1;transl_table=11 PYKI01002243.1 Genbank gene 946 1833 . + . ID=gene-C9F07_21930;Name=C9F07_21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21930 PYKI01002243.1 Protein Homology CDS 946 1833 . + 0 ID=cds-TGD55961.1;Parent=gene-C9F07_21930;Dbxref=NCBI_GP:TGD55961.1;Name=TGD55961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457261.1;locus_tag=C9F07_21930;product=transcriptional regulator;protein_id=TGD55961.1;transl_table=11 PYKI01002243.1 Genbank gene 1858 2049 . - . ID=gene-C9F07_21935;Name=C9F07_21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21935 PYKI01002243.1 Protein Homology CDS 1858 2049 . - 0 ID=cds-TGD55962.1;Parent=gene-C9F07_21935;Dbxref=NCBI_GP:TGD55962.1;Name=TGD55962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219165.1;locus_tag=C9F07_21935;product=hypothetical protein;protein_id=TGD55962.1;transl_table=11 ##sequence-region PYKI01002631.1 1 2245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002631.1 Genbank region 1 2245 . + . ID=PYKI01002631.1:1..2245;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002631.1 Genbank gene 1 507 . + . ID=gene-C9F07_26185;Name=C9F07_26185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26185;partial=true;start_range=.,1 PYKI01002631.1 Protein Homology CDS 1 507 . + 0 ID=cds-TGD49455.1;Parent=gene-C9F07_26185;Dbxref=NCBI_GP:TGD49455.1;Name=TGD49455.1;Note=with SbcD cleaves DNA hairpin structures%3B also has 5' single-strand endonuclease activity;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=C9F07_26185;partial=true;product=exonuclease subunit SbcC;protein_id=TGD49455.1;start_range=.,1;transl_table=11 PYKI01002631.1 Genbank gene 680 1852 . + . ID=gene-C9F07_26190;Name=C9F07_26190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26190 PYKI01002631.1 Protein Homology CDS 680 1852 . + 0 ID=cds-TGD49456.1;Parent=gene-C9F07_26190;Dbxref=NCBI_GP:TGD49456.1;Name=TGD49456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=C9F07_26190;product=MFS transporter AraJ;protein_id=TGD49456.1;transl_table=11 PYKI01002631.1 Genbank pseudogene 1872 2207 . - . ID=gene-C9F07_26195;Name=C9F07_26195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26195;pseudo=true PYKI01002631.1 Protein Homology CDS 1872 2207 . - 0 ID=cds-C9F07_26195;Parent=gene-C9F07_26195;Note=catalyzes phosphorylation of fructose%3B cytosolic enzyme%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=C9F07_26195;product=fructokinase;pseudo=true;transl_table=11 ##sequence-region PYKI01003476.1 1 2244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003476.1 Genbank region 1 2244 . + . ID=PYKI01003476.1:1..2244;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003476.1 Genbank gene 1 802 . - . ID=gene-C9F07_34980;Name=C9F07_34980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34980;partial=true;start_range=.,1 PYKI01003476.1 Protein Homology CDS 1 802 . - 0 ID=cds-TGD32519.1;Parent=gene-C9F07_34980;Dbxref=NCBI_GP:TGD32519.1;Name=TGD32519.1;Note=FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456094.1;locus_tag=C9F07_34980;partial=true;product=alkene reductase;protein_id=TGD32519.1;start_range=.,1;transl_table=11 PYKI01003476.1 Genbank pseudogene 861 1460 . - . ID=gene-C9F07_34985;Name=C9F07_34985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34985;pseudo=true PYKI01003476.1 Protein Homology CDS 861 1460 . - 0 ID=cds-C9F07_34985;Parent=gene-C9F07_34985;Note=represses nemA which is involved in degradation of N-ethylmaleimide%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456093.1;locus_tag=C9F07_34985;product=TetR family transcriptional regulator;pseudo=true;transl_table=11 PYKI01003476.1 Genbank gene 1563 1802 . + . ID=gene-C9F07_34990;Name=C9F07_34990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34990 PYKI01003476.1 Protein Homology CDS 1563 1802 . + 0 ID=cds-TGD32520.1;Parent=gene-C9F07_34990;Dbxref=NCBI_GP:TGD32520.1;Name=TGD32520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456092.1;locus_tag=C9F07_34990;product=DUF1289 domain-containing protein;protein_id=TGD32520.1;transl_table=11 PYKI01003476.1 Genbank gene 1853 2244 . + . ID=gene-C9F07_34995;Name=C9F07_34995;end_range=2244,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34995;partial=true PYKI01003476.1 Protein Homology CDS 1853 2244 . + 0 ID=cds-TGD32521.1;Parent=gene-C9F07_34995;Dbxref=NCBI_GP:TGD32521.1;Name=TGD32521.1;end_range=2244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456091.1;locus_tag=C9F07_34995;partial=true;product=oxidoreductase;protein_id=TGD32521.1;transl_table=11 ##sequence-region PYKI01000836.1 1 2244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000836.1 Genbank region 1 2244 . + . ID=PYKI01000836.1:1..2244;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000836.1 Genbank gene 1 1329 . + . ID=gene-C9F07_07630;Name=C9F07_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07630;partial=true;start_range=.,1 PYKI01000836.1 Protein Homology CDS 1 1329 . + 0 ID=cds-TGE07106.1;Parent=gene-C9F07_07630;Dbxref=NCBI_GP:TGE07106.1;Name=TGE07106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457532.1;locus_tag=C9F07_07630;partial=true;product=glucuronate isomerase;protein_id=TGE07106.1;start_range=.,1;transl_table=11 PYKI01000836.1 Genbank gene 1629 2244 . - . ID=gene-C9F07_07635;Name=C9F07_07635;end_range=2244,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07635;partial=true PYKI01000836.1 Protein Homology CDS 1629 2244 . - 1 ID=cds-TGE07107.1;Parent=gene-C9F07_07635;Dbxref=NCBI_GP:TGE07107.1;Name=TGE07107.1;end_range=2244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=C9F07_07635;partial=true;product=chemotaxis protein;protein_id=TGE07107.1;transl_table=11 ##sequence-region PYKI01000954.1 1 2241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000954.1 Genbank region 1 2241 . + . ID=PYKI01000954.1:1..2241;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000954.1 Genbank pseudogene 24 1391 . + . ID=gene-C9F07_08710;Name=C9F07_08710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08710;pseudo=true PYKI01000954.1 Protein Homology CDS 24 1391 . + 0 ID=cds-C9F07_08710;Parent=gene-C9F07_08710;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461448.1;locus_tag=C9F07_08710;product=fibronectin-binding autotransporter adhesin ShdA;pseudo=true;transl_table=11 PYKI01000954.1 Genbank gene 1555 2241 . - . ID=gene-C9F07_08715;Name=xseA;end_range=2241,.;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=C9F07_08715;partial=true PYKI01000954.1 Protein Homology CDS 1555 2241 . - 0 ID=cds-TGE01415.1;Parent=gene-C9F07_08715;Dbxref=NCBI_GP:TGE01415.1;Name=TGE01415.1;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;end_range=2241,.;gbkey=CDS;gene=xseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457046.1;locus_tag=C9F07_08715;partial=true;product=exodeoxyribonuclease VII large subunit;protein_id=TGE01415.1;transl_table=11 ##sequence-region PYKI01000415.1 1 2241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000415.1 Genbank region 1 2241 . + . ID=PYKI01000415.1:1..2241;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000415.1 Genbank gene 1 1286 . - . ID=gene-C9F07_03190;Name=C9F07_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03190;partial=true;start_range=.,1 PYKI01000415.1 Protein Homology CDS 1 1286 . - 0 ID=cds-TGE20937.1;Parent=gene-C9F07_03190;Dbxref=NCBI_GP:TGE20937.1;Name=TGE20937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016247187.1;locus_tag=C9F07_03190;partial=true;product=formate dehydrogenase;protein_id=TGE20937.1;start_range=.,1;transl_table=11 PYKI01000415.1 Genbank gene 1335 1922 . - . ID=gene-C9F07_03195;Name=C9F07_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03195 PYKI01000415.1 Protein Homology CDS 1335 1922 . - 0 ID=cds-TGE20938.1;Parent=gene-C9F07_03195;Dbxref=NCBI_GP:TGE20938.1;Name=TGE20938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004594160.1;locus_tag=C9F07_03195;product=sulfate ABC transporter substrate-binding protein;protein_id=TGE20938.1;transl_table=11 ##sequence-region PYKI01001654.1 1 2240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001654.1 Genbank region 1 2240 . + . ID=PYKI01001654.1:1..2240;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001654.1 Genbank gene 1 318 . - . ID=gene-C9F07_15785;Name=C9F07_15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15785;partial=true;start_range=.,1 PYKI01001654.1 Protein Homology CDS 1 318 . - 0 ID=cds-TGD70228.1;Parent=gene-C9F07_15785;Dbxref=NCBI_GP:TGD70228.1;Name=TGD70228.1;Note=regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457751.1;locus_tag=C9F07_15785;partial=true;product=RNase E specificity factor CsrD;protein_id=TGD70228.1;start_range=.,1;transl_table=11 PYKI01001654.1 Genbank gene 522 1496 . + . ID=gene-C9F07_15790;Name=C9F07_15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15790 PYKI01001654.1 Protein Homology CDS 522 1496 . + 0 ID=cds-TGD70229.1;Parent=gene-C9F07_15790;Dbxref=NCBI_GP:TGD70229.1;Name=TGD70229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457752.1;locus_tag=C9F07_15790;product=oxidoreductase;protein_id=TGD70229.1;transl_table=11 PYKI01001654.1 Genbank gene 1614 2240 . + . ID=gene-C9F07_15795;Name=C9F07_15795;end_range=2240,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15795;partial=true PYKI01001654.1 Protein Homology CDS 1614 2240 . + 0 ID=cds-TGD70230.1;Parent=gene-C9F07_15795;Dbxref=NCBI_GP:TGD70230.1;Name=TGD70230.1;end_range=2240,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457753.1;locus_tag=C9F07_15795;partial=true;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=TGD70230.1;transl_table=11 ##sequence-region PYKI01000329.1 1 5055 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000329.1 Genbank region 1 5055 . + . ID=PYKI01000329.1:1..5055;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000329.1 Genbank pseudogene 36 713 . - . ID=gene-C9F07_02345;Name=C9F07_02345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02345;pseudo=true PYKI01000329.1 Protein Homology CDS 36 713 . - 0 ID=cds-C9F07_02345;Parent=gene-C9F07_02345;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=C9F07_02345;product=amino acid permease;pseudo=true;transl_table=11 PYKI01000329.1 Genbank gene 735 1628 . - . ID=gene-C9F07_02350;Name=C9F07_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02350 PYKI01000329.1 Protein Homology CDS 735 1628 . - 0 ID=cds-TGE26859.1;Parent=gene-C9F07_02350;Dbxref=NCBI_GP:TGE26859.1;Name=TGE26859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=C9F07_02350;product=hydrolase;protein_id=TGE26859.1;transl_table=11 PYKI01000329.1 Genbank gene 1687 2424 . - . ID=gene-C9F07_02355;Name=C9F07_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02355 PYKI01000329.1 Protein Homology CDS 1687 2424 . - 0 ID=cds-TGE26860.1;Parent=gene-C9F07_02355;Dbxref=NCBI_GP:TGE26860.1;Name=TGE26860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=C9F07_02355;product=cytoplasmic protein;protein_id=TGE26860.1;transl_table=11 PYKI01000329.1 Genbank gene 2436 3662 . - . ID=gene-C9F07_02360;Name=C9F07_02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02360 PYKI01000329.1 Protein Homology CDS 2436 3662 . - 0 ID=cds-TGE26861.1;Parent=gene-C9F07_02360;Dbxref=NCBI_GP:TGE26861.1;Name=TGE26861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=C9F07_02360;product=hypothetical protein;protein_id=TGE26861.1;transl_table=11 PYKI01000329.1 Genbank gene 3985 5055 . - . ID=gene-C9F07_02365;Name=C9F07_02365;end_range=5055,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02365;partial=true PYKI01000329.1 Protein Homology CDS 3985 5055 . - 0 ID=cds-TGE26862.1;Parent=gene-C9F07_02365;Dbxref=NCBI_GP:TGE26862.1;Name=TGE26862.1;end_range=5055,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456144.1;locus_tag=C9F07_02365;partial=true;product=tetrathionate reductase subunit TtrA;protein_id=TGE26862.1;transl_table=11 ##sequence-region PYKI01001184.1 1 2240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001184.1 Genbank region 1 2240 . + . ID=PYKI01001184.1:1..2240;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001184.1 Genbank gene 1 750 . - . ID=gene-C9F07_11065;Name=C9F07_11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11065;partial=true;start_range=.,1 PYKI01001184.1 Protein Homology CDS 1 750 . - 0 ID=cds-TGD92255.1;Parent=gene-C9F07_11065;Dbxref=NCBI_GP:TGD92255.1;Name=TGD92255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=C9F07_11065;partial=true;product=protein MtfA;protein_id=TGD92255.1;start_range=.,1;transl_table=11 PYKI01001184.1 Genbank gene 839 928 . + . ID=gene-C9F07_11070;Name=C9F07_11070;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_11070 PYKI01001184.1 tRNAscan-SE tRNA 839 928 . + . ID=rna-C9F07_11070;Parent=gene-C9F07_11070;anticodon=(pos:873..875);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_11070;product=tRNA-Ser PYKI01001184.1 tRNAscan-SE exon 839 928 . + . ID=exon-C9F07_11070-1;Parent=rna-C9F07_11070;anticodon=(pos:873..875);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_11070;product=tRNA-Ser PYKI01001184.1 Genbank pseudogene 1011 1254 . + . ID=gene-C9F07_11075;Name=C9F07_11075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11075;pseudo=true PYKI01001184.1 Protein Homology CDS 1011 1254 . + 0 ID=cds-C9F07_11075;Parent=gene-C9F07_11075;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218676.1;locus_tag=C9F07_11075;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001184.1 Genbank gene 1232 1393 . + . ID=gene-C9F07_11080;Name=C9F07_11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11080 PYKI01001184.1 Protein Homology CDS 1232 1393 . + 0 ID=cds-TGD92252.1;Parent=gene-C9F07_11080;Dbxref=NCBI_GP:TGD92252.1;Name=TGD92252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460950.1;locus_tag=C9F07_11080;product=hypothetical protein;protein_id=TGD92252.1;transl_table=11 PYKI01001184.1 Genbank gene 1520 1939 . + . ID=gene-C9F07_11085;Name=C9F07_11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11085 PYKI01001184.1 Protein Homology CDS 1520 1939 . + 0 ID=cds-TGD92253.1;Parent=gene-C9F07_11085;Dbxref=NCBI_GP:TGD92253.1;Name=TGD92253.1;Note=binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456557.1;locus_tag=C9F07_11085;product=DNA polymerase V subunit UmuD;protein_id=TGD92253.1;transl_table=11 PYKI01001184.1 Genbank gene 1942 2240 . + . ID=gene-C9F07_11090;Name=C9F07_11090;end_range=2240,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11090;partial=true PYKI01001184.1 Protein Homology CDS 1942 2240 . + 0 ID=cds-TGD92254.1;Parent=gene-C9F07_11090;Dbxref=NCBI_GP:TGD92254.1;Name=TGD92254.1;Note=binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization;end_range=2240,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=C9F07_11090;partial=true;product=DNA polymerase V subunit UmuC;protein_id=TGD92254.1;transl_table=11 ##sequence-region PYKI01002336.1 1 2239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002336.1 Genbank region 1 2239 . + . ID=PYKI01002336.1:1..2239;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002336.1 Genbank gene 161 298 . + . ID=gene-C9F07_22900;Name=C9F07_22900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22900 PYKI01002336.1 Protein Homology CDS 161 298 . + 0 ID=cds-TGD53626.1;Parent=gene-C9F07_22900;Dbxref=NCBI_GP:TGD53626.1;Name=TGD53626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=C9F07_22900;product=hypothetical protein;protein_id=TGD53626.1;transl_table=11 PYKI01002336.1 Genbank gene 491 664 . + . ID=gene-C9F07_22905;Name=C9F07_22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22905 PYKI01002336.1 Protein Homology CDS 491 664 . + 0 ID=cds-TGD53627.1;Parent=gene-C9F07_22905;Dbxref=NCBI_GP:TGD53627.1;Name=TGD53627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456316.1;locus_tag=C9F07_22905;product=addiction module toxin%2C GnsA/GnsB family;protein_id=TGD53627.1;transl_table=11 PYKI01002336.1 Genbank gene 736 1077 . - . ID=gene-C9F07_22910;Name=C9F07_22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22910 PYKI01002336.1 Protein Homology CDS 736 1077 . - 0 ID=cds-TGD53628.1;Parent=gene-C9F07_22910;Dbxref=NCBI_GP:TGD53628.1;Name=TGD53628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=C9F07_22910;product=cytoplasmic protein;protein_id=TGD53628.1;transl_table=11 PYKI01002336.1 Genbank gene 1186 1665 . - . ID=gene-C9F07_22915;Name=C9F07_22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22915 PYKI01002336.1 Protein Homology CDS 1186 1665 . - 0 ID=cds-TGD53629.1;Parent=gene-C9F07_22915;Dbxref=NCBI_GP:TGD53629.1;Name=TGD53629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218683.1;locus_tag=C9F07_22915;product=disulfide bond formation protein DsbB;protein_id=TGD53629.1;transl_table=11 PYKI01002336.1 Genbank gene 1858 2239 . - . ID=gene-C9F07_22920;Name=nhaB;end_range=2239,.;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=C9F07_22920;partial=true PYKI01002336.1 Protein Homology CDS 1858 2239 . - 1 ID=cds-TGD53630.1;Parent=gene-C9F07_22920;Dbxref=NCBI_GP:TGD53630.1;Name=TGD53630.1;Note=involved in regulation of intracellular pH under alkaline conditions;end_range=2239,.;gbkey=CDS;gene=nhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456313.1;locus_tag=C9F07_22920;partial=true;product=sodium/proton antiporter;protein_id=TGD53630.1;transl_table=11 ##sequence-region PYKI01002128.1 1 2237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002128.1 Genbank region 1 2237 . + . ID=PYKI01002128.1:1..2237;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002128.1 Genbank gene 1 387 . - . ID=gene-C9F07_20590;Name=C9F07_20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20590;partial=true;start_range=.,1 PYKI01002128.1 Protein Homology CDS 1 387 . - 0 ID=cds-TGD58305.1;Parent=gene-C9F07_20590;Dbxref=NCBI_GP:TGD58305.1;Name=TGD58305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454791.1;locus_tag=C9F07_20590;partial=true;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=TGD58305.1;start_range=.,1;transl_table=11 PYKI01002128.1 Genbank gene 509 1777 . - . ID=gene-C9F07_20595;Name=C9F07_20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20595 PYKI01002128.1 Protein Homology CDS 509 1777 . - 0 ID=cds-TGD58306.1;Parent=gene-C9F07_20595;Dbxref=NCBI_GP:TGD58306.1;Name=TGD58306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218520.1;locus_tag=C9F07_20595;product=fimbrial protein;protein_id=TGD58306.1;transl_table=11 PYKI01002128.1 Genbank pseudogene 1799 2237 . - . ID=gene-C9F07_20600;Name=C9F07_20600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20600;pseudo=true PYKI01002128.1 Protein Homology CDS 1799 2237 . - 1 ID=cds-C9F07_20600;Parent=gene-C9F07_20600;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527186.1;locus_tag=C9F07_20600;product=fimbrial protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000346.1 1 2237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000346.1 Genbank region 1 2237 . + . ID=PYKI01000346.1:1..2237;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000346.1 Genbank gene 1 216 . - . ID=gene-C9F07_02560;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=C9F07_02560;partial=true;start_range=.,1 PYKI01000346.1 Protein Homology CDS 1 216 . - 0 ID=cds-TGE26826.1;Parent=gene-C9F07_02560;Dbxref=NCBI_GP:TGE26826.1;Name=TGE26826.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457758.1;locus_tag=C9F07_02560;partial=true;product=sodium/panthothenate symporter;protein_id=TGE26826.1;start_range=.,1;transl_table=11 PYKI01000346.1 Genbank gene 206 448 . - . ID=gene-C9F07_02565;Name=C9F07_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02565 PYKI01000346.1 Protein Homology CDS 206 448 . - 0 ID=cds-TGE26827.1;Parent=gene-C9F07_02565;Dbxref=NCBI_GP:TGE26827.1;Name=TGE26827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=C9F07_02565;product=hypothetical protein;protein_id=TGE26827.1;transl_table=11 PYKI01000346.1 Genbank pseudogene 557 1906 . - . ID=gene-C9F07_02570;Name=accC;gbkey=Gene;gene=accC;gene_biotype=pseudogene;locus_tag=C9F07_02570;pseudo=true PYKI01000346.1 Protein Homology CDS 557 1906 . - 0 ID=cds-C9F07_02570;Parent=gene-C9F07_02570;Note=internal stop;gbkey=CDS;gene=accC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=C9F07_02570;product=acetyl-CoA carboxylase biotin carboxylase subunit;pseudo=true;transl_table=11 PYKI01000346.1 Genbank gene 1917 2237 . - . ID=gene-C9F07_02575;Name=C9F07_02575;end_range=2237,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02575;partial=true PYKI01000346.1 Protein Homology CDS 1917 2237 . - 0 ID=cds-TGE26828.1;Parent=gene-C9F07_02575;Dbxref=NCBI_GP:TGE26828.1;Name=TGE26828.1;end_range=2237,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457755.1;locus_tag=C9F07_02575;partial=true;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=TGE26828.1;transl_table=11 ##sequence-region PYKI01000577.1 1 2235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000577.1 Genbank region 1 2235 . + . ID=PYKI01000577.1:1..2235;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000577.1 Genbank gene 257 2068 . + . ID=gene-C9F07_04865;Name=C9F07_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04865 PYKI01000577.1 Protein Homology CDS 257 2068 . + 0 ID=cds-TGE14487.1;Parent=gene-C9F07_04865;Dbxref=NCBI_GP:TGE14487.1;Name=TGE14487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000945954.1;locus_tag=C9F07_04865;product=beta-glucuronidase;protein_id=TGE14487.1;transl_table=11 PYKI01000577.1 Genbank gene 2065 2235 . + . ID=gene-C9F07_04870;Name=C9F07_04870;end_range=2235,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04870;partial=true PYKI01000577.1 Protein Homology CDS 2065 2235 . + 0 ID=cds-TGE14488.1;Parent=gene-C9F07_04870;Dbxref=NCBI_GP:TGE14488.1;Name=TGE14488.1;end_range=2235,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416133.1;locus_tag=C9F07_04870;partial=true;product=MFS transporter;protein_id=TGE14488.1;transl_table=11 ##sequence-region PYKI01003461.1 1 2235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003461.1 Genbank region 1 2235 . + . ID=PYKI01003461.1:1..2235;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003461.1 Genbank gene 1 197 . - . ID=gene-C9F07_34790;Name=C9F07_34790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34790;partial=true;start_range=.,1 PYKI01003461.1 Protein Homology CDS 1 197 . - 0 ID=cds-TGD32932.1;Parent=gene-C9F07_34790;Dbxref=NCBI_GP:TGD32932.1;Name=TGD32932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454975.1;locus_tag=C9F07_34790;partial=true;product=D-alanine--D-alanine ligase A;protein_id=TGD32932.1;start_range=.,1;transl_table=11 PYKI01003461.1 Genbank gene 275 988 . + . ID=gene-C9F07_34795;Name=C9F07_34795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34795 PYKI01003461.1 Protein Homology CDS 275 988 . + 0 ID=cds-TGD32933.1;Parent=gene-C9F07_34795;Dbxref=NCBI_GP:TGD32933.1;Name=TGD32933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=C9F07_34795;product=extensin;protein_id=TGD32933.1;transl_table=11 PYKI01003461.1 Genbank gene 1157 2235 . + . ID=gene-C9F07_34800;Name=C9F07_34800;end_range=2235,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34800;partial=true PYKI01003461.1 Protein Homology CDS 1157 2235 . + 0 ID=cds-TGD32934.1;Parent=gene-C9F07_34800;Dbxref=NCBI_GP:TGD32934.1;Name=TGD32934.1;Note=Confers resistance to fosfomycin and deoxycholate;end_range=2235,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=C9F07_34800;partial=true;product=multidrug transporter subunit MdtG;protein_id=TGD32934.1;transl_table=11 ##sequence-region PYKI01002559.1 1 2235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002559.1 Genbank region 1 2235 . + . ID=PYKI01002559.1:1..2235;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002559.1 Genbank gene 1 288 . + . ID=gene-C9F07_25405;Name=C9F07_25405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25405;partial=true;start_range=.,1 PYKI01002559.1 Protein Homology CDS 1 288 . + 0 ID=cds-TGD49866.1;Parent=gene-C9F07_25405;Dbxref=NCBI_GP:TGD49866.1;Name=TGD49866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458025.1;locus_tag=C9F07_25405;partial=true;product=glucose-1-phosphatase;protein_id=TGD49866.1;start_range=.,1;transl_table=11 PYKI01002559.1 Genbank gene 282 1154 . + . ID=gene-C9F07_25410;Name=C9F07_25410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25410 PYKI01002559.1 Protein Homology CDS 282 1154 . + 0 ID=cds-TGD49867.1;Parent=gene-C9F07_25410;Dbxref=NCBI_GP:TGD49867.1;Name=TGD49867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458024.1;locus_tag=C9F07_25410;product=virulence factor BrkB family protein;protein_id=TGD49867.1;transl_table=11 PYKI01002559.1 Genbank gene 1151 1588 . + . ID=gene-C9F07_25415;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=C9F07_25415 PYKI01002559.1 Protein Homology CDS 1151 1588 . + 0 ID=cds-TGD49868.1;Parent=gene-C9F07_25415;Dbxref=NCBI_GP:TGD49868.1;Name=TGD49868.1;gbkey=CDS;gene=dtd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=C9F07_25415;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=TGD49868.1;transl_table=11 PYKI01002559.1 Genbank gene 1585 2235 . + . ID=gene-C9F07_25420;Name=C9F07_25420;end_range=2235,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25420;partial=true PYKI01002559.1 Protein Homology CDS 1585 2235 . + 0 ID=cds-TGD49869.1;Parent=gene-C9F07_25420;Dbxref=NCBI_GP:TGD49869.1;Name=TGD49869.1;end_range=2235,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458022.1;locus_tag=C9F07_25420;partial=true;product=GNAT family N-acetyltransferase;protein_id=TGD49869.1;transl_table=11 ##sequence-region PYKI01001882.1 1 2232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001882.1 Genbank region 1 2232 . + . ID=PYKI01001882.1:1..2232;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001882.1 Genbank gene 21 374 . - . ID=gene-C9F07_18155;Name=C9F07_18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18155 PYKI01001882.1 Protein Homology CDS 21 374 . - 0 ID=cds-TGD62131.1;Parent=gene-C9F07_18155;Dbxref=NCBI_GP:TGD62131.1;Name=TGD62131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000574090.1;locus_tag=C9F07_18155;product=GNAT family N-acetyltransferase;protein_id=TGD62131.1;transl_table=11 PYKI01001882.1 Genbank gene 435 1352 . + . ID=gene-C9F07_18160;Name=C9F07_18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18160 PYKI01001882.1 Protein Homology CDS 435 1352 . + 0 ID=cds-TGD62132.1;Parent=gene-C9F07_18160;Dbxref=NCBI_GP:TGD62132.1;Name=TGD62132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456856.1;locus_tag=C9F07_18160;product=ribonuclease BN;protein_id=TGD62132.1;transl_table=11 PYKI01001882.1 Genbank gene 1418 2232 . + . ID=gene-C9F07_18165;Name=C9F07_18165;end_range=2232,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18165;partial=true PYKI01001882.1 Protein Homology CDS 1418 2232 . + 0 ID=cds-TGD62133.1;Parent=gene-C9F07_18165;Dbxref=NCBI_GP:TGD62133.1;Name=TGD62133.1;end_range=2232,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461256.1;locus_tag=C9F07_18165;partial=true;product=chemotaxis protein CheV;protein_id=TGD62133.1;transl_table=11 ##sequence-region PYKI01001013.1 1 2231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001013.1 Genbank region 1 2231 . + . ID=PYKI01001013.1:1..2231;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001013.1 Genbank gene 374 1387 . - . ID=gene-C9F07_09290;Name=C9F07_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09290 PYKI01001013.1 Protein Homology CDS 374 1387 . - 0 ID=cds-TGD97823.1;Parent=gene-C9F07_09290;Dbxref=NCBI_GP:TGD97823.1;Name=TGD97823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=C9F07_09290;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=TGD97823.1;transl_table=11 PYKI01001013.1 Genbank gene 1520 2231 . - . ID=gene-C9F07_09295;Name=C9F07_09295;end_range=2231,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09295;partial=true PYKI01001013.1 Protein Homology CDS 1520 2231 . - 1 ID=cds-TGD97824.1;Parent=gene-C9F07_09295;Dbxref=NCBI_GP:TGD97824.1;Name=TGD97824.1;end_range=2231,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=C9F07_09295;partial=true;product=histidine kinase;protein_id=TGD97824.1;transl_table=11 ##sequence-region PYKI01000469.1 1 2230 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000469.1 Genbank region 1 2230 . + . ID=PYKI01000469.1:1..2230;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000469.1 Genbank gene 1 581 . - . ID=gene-C9F07_03690;Name=C9F07_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03690;partial=true;start_range=.,1 PYKI01000469.1 Protein Homology CDS 1 581 . - 0 ID=cds-TGE19757.1;Parent=gene-C9F07_03690;Dbxref=NCBI_GP:TGE19757.1;Name=TGE19757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457543.1;locus_tag=C9F07_03690;partial=true;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=TGE19757.1;start_range=.,1;transl_table=11 PYKI01000469.1 Genbank gene 571 1557 . - . ID=gene-C9F07_03695;Name=C9F07_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03695 PYKI01000469.1 Protein Homology CDS 571 1557 . - 0 ID=cds-TGE19758.1;Parent=gene-C9F07_03695;Dbxref=NCBI_GP:TGE19758.1;Name=TGE19758.1;Note=Fe-S ferrodoxin type component%3B participates in the periplasmic electron-transferring activity of hydrogenase 2;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457544.1;locus_tag=C9F07_03695;product=hydrogenase 2 operon protein HybA;protein_id=TGE19758.1;transl_table=11 PYKI01000469.1 Genbank gene 1560 2230 . - . ID=gene-C9F07_03700;Name=C9F07_03700;end_range=2230,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03700;partial=true PYKI01000469.1 Protein Homology CDS 1560 2230 . - 2 ID=cds-TGE19759.1;Parent=gene-C9F07_03700;Dbxref=NCBI_GP:TGE19759.1;Name=TGE19759.1;Note=involved in hydrogen uptake;end_range=2230,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457545.1;locus_tag=C9F07_03700;partial=true;product=hydrogenase 2 small subunit;protein_id=TGE19759.1;transl_table=11 ##sequence-region PYKI01000948.1 1 5054 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000948.1 Genbank region 1 5054 . + . ID=PYKI01000948.1:1..5054;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000948.1 Genbank gene 103 2436 . + . ID=gene-C9F07_08670;Name=C9F07_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08670 PYKI01000948.1 Protein Homology CDS 103 2436 . + 0 ID=cds-TGE01550.1;Parent=gene-C9F07_08670;Dbxref=NCBI_GP:TGE01550.1;Name=TGE01550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458910.1;locus_tag=C9F07_08670;product=DNA primase;protein_id=TGE01550.1;transl_table=11 PYKI01000948.1 Genbank gene 3049 4656 . + . ID=gene-C9F07_08675;Name=C9F07_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08675 PYKI01000948.1 Protein Homology CDS 3049 4656 . + 0 ID=cds-TGE01551.1;Parent=gene-C9F07_08675;Dbxref=NCBI_GP:TGE01551.1;Name=TGE01551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737596.1;locus_tag=C9F07_08675;product=RNA-dependent DNA polymerase;protein_id=TGE01551.1;transl_table=11 PYKI01000948.1 Genbank pseudogene 4804 5054 . - . ID=gene-C9F07_08680;Name=C9F07_08680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08680;pseudo=true PYKI01000948.1 Protein Homology CDS 4804 5054 . - 1 ID=cds-C9F07_08680;Parent=gene-C9F07_08680;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558297.1;locus_tag=C9F07_08680;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region PYKI01002722.1 1 2226 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002722.1 Genbank region 1 2226 . + . ID=PYKI01002722.1:1..2226;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002722.1 Genbank pseudogene 79 969 . + . ID=gene-C9F07_27150;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=pseudogene;gene_synonym=yicF;locus_tag=C9F07_27150;pseudo=true PYKI01002722.1 Protein Homology CDS 79 969 . + 0 ID=cds-C9F07_27150;Parent=gene-C9F07_27150;Note=this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=ligB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=C9F07_27150;product=ATP-dependent DNA ligase;pseudo=true;transl_table=11 PYKI01002722.1 Genbank gene 966 1583 . - . ID=gene-C9F07_27155;Name=C9F07_27155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27155 PYKI01002722.1 Protein Homology CDS 966 1583 . - 0 ID=cds-TGD47571.1;Parent=gene-C9F07_27155;Dbxref=NCBI_GP:TGD47571.1;Name=TGD47571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=C9F07_27155;product=hypothetical protein;protein_id=TGD47571.1;transl_table=11 PYKI01002722.1 Genbank gene 1834 2226 . - . ID=gene-C9F07_27160;Name=C9F07_27160;end_range=2226,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27160;partial=true PYKI01002722.1 Protein Homology CDS 1834 2226 . - 0 ID=cds-TGD47572.1;Parent=gene-C9F07_27160;Dbxref=NCBI_GP:TGD47572.1;Name=TGD47572.1;end_range=2226,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=C9F07_27160;partial=true;product=MBL fold protein;protein_id=TGD47572.1;transl_table=11 ##sequence-region PYKI01003324.1 1 2226 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003324.1 Genbank region 1 2226 . + . ID=PYKI01003324.1:1..2226;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003324.1 Genbank gene 1 182 . - . ID=gene-C9F07_33430;Name=C9F07_33430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33430;partial=true;start_range=.,1 PYKI01003324.1 Protein Homology CDS 1 182 . - 0 ID=cds-TGD35929.1;Parent=gene-C9F07_33430;Dbxref=NCBI_GP:TGD35929.1;Name=TGD35929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017490251.1;locus_tag=C9F07_33430;partial=true;product=hypothetical protein;protein_id=TGD35929.1;start_range=.,1;transl_table=11 PYKI01003324.1 Genbank gene 198 641 . - . ID=gene-C9F07_33435;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=C9F07_33435 PYKI01003324.1 Protein Homology CDS 198 641 . - 0 ID=cds-TGD35930.1;Parent=gene-C9F07_33435;Dbxref=NCBI_GP:TGD35930.1;Name=TGD35930.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456870.1;locus_tag=C9F07_33435;product=NADH-quinone oxidoreductase subunit A;protein_id=TGD35930.1;transl_table=11 PYKI01003324.1 Genbank gene 1035 1187 . - . ID=gene-C9F07_33440;Name=C9F07_33440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33440 PYKI01003324.1 Protein Homology CDS 1035 1187 . - 0 ID=cds-TGD35931.1;Parent=gene-C9F07_33440;Dbxref=NCBI_GP:TGD35931.1;Name=TGD35931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=C9F07_33440;product=hypothetical protein;protein_id=TGD35931.1;transl_table=11 PYKI01003324.1 Genbank pseudogene 1267 2204 . - . ID=gene-C9F07_33445;Name=C9F07_33445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33445;pseudo=true PYKI01003324.1 Protein Homology CDS 1267 2204 . - 0 ID=cds-C9F07_33445;Parent=gene-C9F07_33445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=C9F07_33445;product=transcriptional regulator LrhA;pseudo=true;transl_table=11 ##sequence-region PYKI01002380.1 1 2224 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002380.1 Genbank region 1 2224 . + . ID=PYKI01002380.1:1..2224;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002380.1 Genbank gene 1 418 . - . ID=gene-C9F07_23410;Name=C9F07_23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23410;partial=true;start_range=.,1 PYKI01002380.1 GeneMarkS+ CDS 1 418 . - 0 ID=cds-TGD52423.1;Parent=gene-C9F07_23410;Dbxref=NCBI_GP:TGD52423.1;Name=TGD52423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F07_23410;partial=true;product=hypothetical protein;protein_id=TGD52423.1;start_range=.,1;transl_table=11 PYKI01002380.1 Genbank gene 594 2224 . + . ID=gene-C9F07_23415;Name=C9F07_23415;end_range=2224,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23415;partial=true PYKI01002380.1 Protein Homology CDS 594 2224 . + 0 ID=cds-TGD52424.1;Parent=gene-C9F07_23415;Dbxref=NCBI_GP:TGD52424.1;Name=TGD52424.1;end_range=2224,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230790.1;locus_tag=C9F07_23415;partial=true;product=ATP-dependent helicase;protein_id=TGD52424.1;transl_table=11 ##sequence-region PYKI01002095.1 1 2223 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002095.1 Genbank region 1 2223 . + . ID=PYKI01002095.1:1..2223;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002095.1 Genbank gene 141 353 . + . ID=gene-C9F07_20315;Name=C9F07_20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20315 PYKI01002095.1 Protein Homology CDS 141 353 . + 0 ID=cds-TGD58802.1;Parent=gene-C9F07_20315;Dbxref=NCBI_GP:TGD58802.1;Name=TGD58802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063796.1;locus_tag=C9F07_20315;product=faeA-like family protein;protein_id=TGD58802.1;transl_table=11 PYKI01002095.1 Genbank gene 801 1649 . + . ID=gene-C9F07_20320;Name=C9F07_20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20320 PYKI01002095.1 Protein Homology CDS 801 1649 . + 0 ID=cds-TGD58803.1;Parent=gene-C9F07_20320;Dbxref=NCBI_GP:TGD58803.1;Name=TGD58803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175395.1;locus_tag=C9F07_20320;product=hypothetical protein;protein_id=TGD58803.1;transl_table=11 PYKI01002095.1 Genbank gene 1781 2223 . - . ID=gene-C9F07_20325;Name=C9F07_20325;end_range=2223,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20325;partial=true PYKI01002095.1 Protein Homology CDS 1781 2223 . - 2 ID=cds-TGD58804.1;Parent=gene-C9F07_20325;Dbxref=NCBI_GP:TGD58804.1;Name=TGD58804.1;end_range=2223,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458615.1;locus_tag=C9F07_20325;partial=true;product=non-specific acid phosphatase;protein_id=TGD58804.1;transl_table=11 ##sequence-region PYKI01003056.1 1 2222 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003056.1 Genbank region 1 2222 . + . ID=PYKI01003056.1:1..2222;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003056.1 Genbank gene 1 767 . + . ID=gene-C9F07_30645;Name=C9F07_30645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30645;partial=true;start_range=.,1 PYKI01003056.1 Protein Homology CDS 1 767 . + 2 ID=cds-TGD40982.1;Parent=gene-C9F07_30645;Dbxref=NCBI_GP:TGD40982.1;Name=TGD40982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463397.1;locus_tag=C9F07_30645;partial=true;product=PTS mannose transporter subunit IID;protein_id=TGD40982.1;start_range=.,1;transl_table=11 PYKI01003056.1 Genbank gene 780 1841 . + . ID=gene-C9F07_30650;Name=C9F07_30650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30650 PYKI01003056.1 Protein Homology CDS 780 1841 . + 0 ID=cds-TGD40981.1;Parent=gene-C9F07_30650;Dbxref=NCBI_GP:TGD40981.1;Name=TGD40981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=C9F07_30650;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=TGD40981.1;transl_table=11 PYKI01003056.1 Genbank gene 1838 2222 . + . ID=gene-C9F07_30655;Name=C9F07_30655;end_range=2222,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30655;partial=true PYKI01003056.1 Protein Homology CDS 1838 2222 . + 0 ID=cds-TGD40983.1;Parent=gene-C9F07_30655;Dbxref=NCBI_GP:TGD40983.1;Name=TGD40983.1;end_range=2222,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463399.3;locus_tag=C9F07_30655;partial=true;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=TGD40983.1;transl_table=11 ##sequence-region PYKI01002536.1 1 2221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002536.1 Genbank region 1 2221 . + . ID=PYKI01002536.1:1..2221;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002536.1 Genbank gene 1 152 . + . ID=gene-C9F07_25150;Name=C9F07_25150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25150;partial=true;start_range=.,1 PYKI01002536.1 Protein Homology CDS 1 152 . + 2 ID=cds-TGD50008.1;Parent=gene-C9F07_25150;Dbxref=NCBI_GP:TGD50008.1;Name=TGD50008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104990.1;locus_tag=C9F07_25150;partial=true;product=helix-turn-helix domain-containing protein;protein_id=TGD50008.1;start_range=.,1;transl_table=11 PYKI01002536.1 Genbank pseudogene 112 636 . + . ID=gene-C9F07_25155;Name=C9F07_25155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25155;pseudo=true PYKI01002536.1 Protein Homology CDS 112 636 . + 0 ID=cds-C9F07_25155;Parent=gene-C9F07_25155;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000265005.1;locus_tag=C9F07_25155;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002536.1 Genbank gene 636 1289 . + . ID=gene-C9F07_25160;Name=C9F07_25160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25160 PYKI01002536.1 Protein Homology CDS 636 1289 . + 0 ID=cds-TGD50009.1;Parent=gene-C9F07_25160;Dbxref=NCBI_GP:TGD50009.1;Name=TGD50009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001378271.1;locus_tag=C9F07_25160;product=phage N-6-adenine-methyltransferase;protein_id=TGD50009.1;transl_table=11 PYKI01002536.1 Genbank gene 1286 1675 . + . ID=gene-C9F07_25165;Name=C9F07_25165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25165 PYKI01002536.1 Protein Homology CDS 1286 1675 . + 0 ID=cds-TGD50010.1;Parent=gene-C9F07_25165;Dbxref=NCBI_GP:TGD50010.1;Name=TGD50010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411629.1;locus_tag=C9F07_25165;product=hypothetical protein;protein_id=TGD50010.1;transl_table=11 PYKI01002536.1 Genbank gene 1692 2221 . + . ID=gene-C9F07_25170;Name=C9F07_25170;end_range=2221,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25170;partial=true PYKI01002536.1 Protein Homology CDS 1692 2221 . + 0 ID=cds-TGD50011.1;Parent=gene-C9F07_25170;Dbxref=NCBI_GP:TGD50011.1;Name=TGD50011.1;end_range=2221,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061457.1;locus_tag=C9F07_25170;partial=true;product=DNA-binding protein;protein_id=TGD50011.1;transl_table=11 ##sequence-region PYKI01000827.1 1 2218 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000827.1 Genbank region 1 2218 . + . ID=PYKI01000827.1:1..2218;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000827.1 Genbank gene 1 165 . - . ID=gene-C9F07_07530;Name=C9F07_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07530;partial=true;start_range=.,1 PYKI01000827.1 Protein Homology CDS 1 165 . - 0 ID=cds-TGE07232.1;Parent=gene-C9F07_07530;Dbxref=NCBI_GP:TGE07232.1;Name=TGE07232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454955.1;locus_tag=C9F07_07530;partial=true;product=cytochrome ubiquinol oxidase subunit I;protein_id=TGE07232.1;start_range=.,1;transl_table=11 PYKI01000827.1 Genbank gene 282 383 . - . ID=gene-C9F07_07535;Name=C9F07_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07535 PYKI01000827.1 Protein Homology CDS 282 383 . - 0 ID=cds-TGE07233.1;Parent=gene-C9F07_07535;Dbxref=NCBI_GP:TGE07233.1;Name=TGE07233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=C9F07_07535;product=hypothetical protein;protein_id=TGE07233.1;transl_table=11 PYKI01000827.1 Genbank gene 659 2218 . - . ID=gene-C9F07_07540;Name=C9F07_07540;end_range=2218,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07540;partial=true PYKI01000827.1 Protein Homology CDS 659 2218 . - 0 ID=cds-TGE07234.1;Parent=gene-C9F07_07540;Dbxref=NCBI_GP:TGE07234.1;Name=TGE07234.1;end_range=2218,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=C9F07_07540;partial=true;product=type III restriction-modification system endonuclease;protein_id=TGE07234.1;transl_table=11 ##sequence-region PYKI01002248.1 1 2218 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002248.1 Genbank region 1 2218 . + . ID=PYKI01002248.1:1..2218;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002248.1 Genbank pseudogene 70 348 . + . ID=gene-C9F07_21960;Name=C9F07_21960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21960;pseudo=true PYKI01002248.1 Protein Homology CDS 70 348 . + 0 ID=cds-C9F07_21960;Parent=gene-C9F07_21960;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457447.1;locus_tag=C9F07_21960;product=hemolysin III family protein;pseudo=true;transl_table=11 PYKI01002248.1 Genbank gene 356 547 . + . ID=gene-C9F07_21965;Name=C9F07_21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21965 PYKI01002248.1 Protein Homology CDS 356 547 . + 0 ID=cds-TGD55750.1;Parent=gene-C9F07_21965;Dbxref=NCBI_GP:TGD55750.1;Name=TGD55750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667675.1;locus_tag=C9F07_21965;product=hypothetical protein;protein_id=TGD55750.1;transl_table=11 PYKI01002248.1 Genbank gene 464 1444 . - . ID=gene-C9F07_21970;Name=C9F07_21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21970 PYKI01002248.1 Protein Homology CDS 464 1444 . - 0 ID=cds-TGD55751.1;Parent=gene-C9F07_21970;Dbxref=NCBI_GP:TGD55751.1;Name=TGD55751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457446.1;locus_tag=C9F07_21970;product=tRNA-modifying protein YgfZ;protein_id=TGD55751.1;transl_table=11 PYKI01002248.1 Genbank gene 1459 1695 . - . ID=gene-C9F07_21975;Name=C9F07_21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21975 PYKI01002248.1 Protein Homology CDS 1459 1695 . - 0 ID=cds-TGD55752.1;Parent=gene-C9F07_21975;Dbxref=NCBI_GP:TGD55752.1;Name=TGD55752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991993.1;locus_tag=C9F07_21975;product=hypothetical protein;protein_id=TGD55752.1;transl_table=11 PYKI01002248.1 Genbank gene 1694 1960 . + . ID=gene-C9F07_21980;Name=C9F07_21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21980 PYKI01002248.1 Protein Homology CDS 1694 1960 . + 0 ID=cds-TGD55753.1;Parent=gene-C9F07_21980;Dbxref=NCBI_GP:TGD55753.1;Name=TGD55753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=C9F07_21980;product=FAD assembly factor SdhE;protein_id=TGD55753.1;transl_table=11 PYKI01002248.1 Genbank gene 1941 2218 . + . ID=gene-C9F07_21985;Name=C9F07_21985;end_range=2218,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21985;partial=true PYKI01002248.1 Protein Homology CDS 1941 2218 . + 0 ID=cds-TGD55754.1;Parent=gene-C9F07_21985;Dbxref=NCBI_GP:TGD55754.1;Name=TGD55754.1;end_range=2218,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=C9F07_21985;partial=true;product=hypothetical protein;protein_id=TGD55754.1;transl_table=11 ##sequence-region PYKI01002050.1 1 2217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002050.1 Genbank region 1 2217 . + . ID=PYKI01002050.1:1..2217;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002050.1 Genbank gene 266 448 . - . ID=gene-C9F07_19840;Name=C9F07_19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19840 PYKI01002050.1 Protein Homology CDS 266 448 . - 0 ID=cds-TGD59961.1;Parent=gene-C9F07_19840;Dbxref=NCBI_GP:TGD59961.1;Name=TGD59961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001439943.1;locus_tag=C9F07_19840;product=hypothetical protein;protein_id=TGD59961.1;transl_table=11 PYKI01002050.1 Genbank gene 448 543 . - . ID=gene-C9F07_19845;Name=C9F07_19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19845 PYKI01002050.1 Protein Homology CDS 448 543 . - 0 ID=cds-TGD59962.1;Parent=gene-C9F07_19845;Dbxref=NCBI_GP:TGD59962.1;Name=TGD59962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=C9F07_19845;product=hypothetical protein;protein_id=TGD59962.1;transl_table=11 PYKI01002050.1 Genbank gene 791 1978 . - . ID=gene-C9F07_19850;Name=C9F07_19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19850 PYKI01002050.1 Protein Homology CDS 791 1978 . - 0 ID=cds-TGD59963.1;Parent=gene-C9F07_19850;Dbxref=NCBI_GP:TGD59963.1;Name=TGD59963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=C9F07_19850;product=transporter;protein_id=TGD59963.1;transl_table=11 ##sequence-region PYKI01000311.1 1 2216 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000311.1 Genbank region 1 2216 . + . ID=PYKI01000311.1:1..2216;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000311.1 Genbank pseudogene 1 302 . - . ID=gene-C9F07_02110;Name=C9F07_02110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02110;pseudo=true PYKI01000311.1 Protein Homology CDS 1 302 . - 0 ID=cds-C9F07_02110;Parent=gene-C9F07_02110;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458260.1;locus_tag=C9F07_02110;product=transcriptional regulator;pseudo=true;transl_table=11 PYKI01000311.1 Genbank gene 532 1530 . + . ID=gene-C9F07_02115;Name=C9F07_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02115 PYKI01000311.1 Protein Homology CDS 532 1530 . + 0 ID=cds-TGE27774.1;Parent=gene-C9F07_02115;Dbxref=NCBI_GP:TGE27774.1;Name=TGE27774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=C9F07_02115;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=TGE27774.1;transl_table=11 PYKI01000311.1 Genbank gene 1542 2006 . + . ID=gene-C9F07_02120;Name=C9F07_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02120 PYKI01000311.1 Protein Homology CDS 1542 2006 . + 0 ID=cds-TGE27775.1;Parent=gene-C9F07_02120;Dbxref=NCBI_GP:TGE27775.1;Name=TGE27775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=C9F07_02120;product=YhcH/YjgK/YiaL family protein;protein_id=TGE27775.1;transl_table=11 PYKI01000311.1 Genbank gene 2030 2216 . + . ID=gene-C9F07_02125;Name=C9F07_02125;end_range=2216,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02125;partial=true PYKI01000311.1 Protein Homology CDS 2030 2216 . + 0 ID=cds-TGE27776.1;Parent=gene-C9F07_02125;Dbxref=NCBI_GP:TGE27776.1;Name=TGE27776.1;end_range=2216,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458257.1;locus_tag=C9F07_02125;partial=true;product=hypothetical protein;protein_id=TGE27776.1;transl_table=11 ##sequence-region PYKI01003475.1 1 5000 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003475.1 Genbank region 1 5000 . + . ID=PYKI01003475.1:1..5000;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003475.1 Genbank gene 1 620 . + . ID=gene-C9F07_34945;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=C9F07_34945;partial=true;start_range=.,1 PYKI01003475.1 Protein Homology CDS 1 620 . + 2 ID=cds-TGD32525.1;Parent=gene-C9F07_34945;Dbxref=NCBI_GP:TGD32525.1;Name=TGD32525.1;gbkey=CDS;gene=tsaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=C9F07_34945;partial=true;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=TGD32525.1;start_range=.,1;transl_table=11 PYKI01003475.1 Genbank pseudogene 731 2446 . + . ID=gene-C9F07_34950;Name=proS;gbkey=Gene;gene=proS;gene_biotype=pseudogene;locus_tag=C9F07_34950;pseudo=true PYKI01003475.1 Protein Homology CDS 731 2446 . + 0 ID=cds-C9F07_34950;Parent=gene-C9F07_34950;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=proS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=C9F07_34950;product=proline--tRNA ligase;pseudo=true;transl_table=11 PYKI01003475.1 Genbank gene 2523 3224 . - . ID=gene-C9F07_34955;Name=C9F07_34955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34955 PYKI01003475.1 Protein Homology CDS 2523 3224 . - 0 ID=cds-TGD32526.1;Parent=gene-C9F07_34955;Dbxref=NCBI_GP:TGD32526.1;Name=TGD32526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454849.1;locus_tag=C9F07_34955;product=copper homeostasis/adhesion lipoprotein NlpE;protein_id=TGD32526.1;transl_table=11 PYKI01003475.1 Genbank gene 3256 3678 . - . ID=gene-C9F07_34960;Name=C9F07_34960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34960 PYKI01003475.1 Protein Homology CDS 3256 3678 . - 0 ID=cds-TGD32527.1;Parent=gene-C9F07_34960;Dbxref=NCBI_GP:TGD32527.1;Name=TGD32527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=C9F07_34960;product=aminoacyl-tRNA hydrolase;protein_id=TGD32527.1;transl_table=11 PYKI01003475.1 Genbank gene 3675 4220 . - . ID=gene-C9F07_34965;Name=C9F07_34965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34965 PYKI01003475.1 Protein Homology CDS 3675 4220 . - 0 ID=cds-TGD32528.1;Parent=gene-C9F07_34965;Dbxref=NCBI_GP:TGD32528.1;Name=TGD32528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454847.1;locus_tag=C9F07_34965;product=hypothetical protein;protein_id=TGD32528.1;transl_table=11 PYKI01003475.1 Genbank gene 4400 4618 . + . ID=gene-C9F07_34970;Name=C9F07_34970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34970 PYKI01003475.1 Protein Homology CDS 4400 4618 . + 0 ID=cds-TGD32529.1;Parent=gene-C9F07_34970;Dbxref=NCBI_GP:TGD32529.1;Name=TGD32529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454846.1;locus_tag=C9F07_34970;product=hypothetical protein;protein_id=TGD32529.1;transl_table=11 PYKI01003475.1 Genbank gene 4605 4865 . + . ID=gene-C9F07_34975;Name=C9F07_34975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34975 PYKI01003475.1 Protein Homology CDS 4605 4865 . + 0 ID=cds-TGD32530.1;Parent=gene-C9F07_34975;Dbxref=NCBI_GP:TGD32530.1;Name=TGD32530.1;Note=Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=C9F07_34975;product=Rho-binding antiterminator;protein_id=TGD32530.1;transl_table=11 ##sequence-region PYKI01002950.1 1 2213 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002950.1 Genbank region 1 2213 . + . ID=PYKI01002950.1:1..2213;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002950.1 Genbank pseudogene 1 2213 . + . ID=gene-C9F07_29565;Name=C9F07_29565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29565;pseudo=true PYKI01002950.1 Protein Homology CDS 1 2213 . + 2 ID=cds-C9F07_29565;Parent=gene-C9F07_29565;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457158.1;locus_tag=C9F07_29565;product=Ig-like domain repeat protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002238.1 1 2207 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002238.1 Genbank region 1 2207 . + . ID=PYKI01002238.1:1..2207;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002238.1 Genbank gene 1 433 . + . ID=gene-C9F07_21855;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=C9F07_21855;partial=true;start_range=.,1 PYKI01002238.1 Protein Homology CDS 1 433 . + 1 ID=cds-TGD55976.1;Parent=gene-C9F07_21855;Dbxref=NCBI_GP:TGD55976.1;Name=TGD55976.1;gbkey=CDS;gene=efp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=C9F07_21855;partial=true;product=elongation factor P;protein_id=TGD55976.1;start_range=.,1;transl_table=11 PYKI01002238.1 Genbank gene 494 628 . + . ID=gene-C9F07_21860;Name=C9F07_21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21860 PYKI01002238.1 Protein Homology CDS 494 628 . + 0 ID=cds-TGD55980.1;Parent=gene-C9F07_21860;Dbxref=NCBI_GP:TGD55980.1;Name=TGD55980.1;Note=acts as and antidote to the bacteriolytic entericidin B in the EcnAB toxin-antitoxin complex;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463199.2;locus_tag=C9F07_21860;product=entericidin A;protein_id=TGD55980.1;transl_table=11 PYKI01002238.1 Genbank pseudogene 534 714 . - . ID=gene-C9F07_21865;Name=C9F07_21865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21865;pseudo=true PYKI01002238.1 Protein Homology CDS 534 714 . - 0 ID=cds-C9F07_21865;Parent=gene-C9F07_21865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001332935.1;locus_tag=C9F07_21865;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002238.1 Genbank gene 736 882 . + . ID=gene-C9F07_21870;Name=C9F07_21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21870 PYKI01002238.1 Protein Homology CDS 736 882 . + 0 ID=cds-TGD55977.1;Parent=gene-C9F07_21870;Dbxref=NCBI_GP:TGD55977.1;Name=TGD55977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458775.1;locus_tag=C9F07_21870;product=entericidin B;protein_id=TGD55977.1;transl_table=11 PYKI01002238.1 Genbank gene 913 1500 . - . ID=gene-C9F07_21875;Name=C9F07_21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21875 PYKI01002238.1 Protein Homology CDS 913 1500 . - 0 ID=cds-TGD55978.1;Parent=gene-C9F07_21875;Dbxref=NCBI_GP:TGD55978.1;Name=TGD55978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458776.1;locus_tag=C9F07_21875;product=DNA-binding response regulator;protein_id=TGD55978.1;transl_table=11 PYKI01002238.1 Genbank gene 1757 2074 . + . ID=gene-C9F07_21880;Name=C9F07_21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21880 PYKI01002238.1 Protein Homology CDS 1757 2074 . + 0 ID=cds-TGD55979.1;Parent=gene-C9F07_21880;Dbxref=NCBI_GP:TGD55979.1;Name=TGD55979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458777.1;locus_tag=C9F07_21880;product=quaternary ammonium compound-resistance protein SugE;protein_id=TGD55979.1;transl_table=11 ##sequence-region PYKI01002480.1 1 2207 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002480.1 Genbank region 1 2207 . + . ID=PYKI01002480.1:1..2207;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002480.1 Genbank gene 2 250 . - . ID=gene-C9F07_24480;Name=C9F07_24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24480 PYKI01002480.1 Protein Homology CDS 2 250 . - 0 ID=cds-TGD50497.1;Parent=gene-C9F07_24480;Dbxref=NCBI_GP:TGD50497.1;Name=TGD50497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=C9F07_24480;product=DUF1471 domain-containing protein;protein_id=TGD50497.1;transl_table=11 PYKI01002480.1 Genbank gene 637 1032 . + . ID=gene-C9F07_24485;Name=C9F07_24485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24485 PYKI01002480.1 Protein Homology CDS 637 1032 . + 0 ID=cds-TGD50498.1;Parent=gene-C9F07_24485;Dbxref=NCBI_GP:TGD50498.1;Name=TGD50498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=C9F07_24485;product=30S ribosomal protein S6;protein_id=TGD50498.1;transl_table=11 PYKI01002480.1 Genbank gene 1039 1353 . + . ID=gene-C9F07_24490;Name=C9F07_24490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24490 PYKI01002480.1 Protein Homology CDS 1039 1353 . + 0 ID=cds-TGD50499.1;Parent=gene-C9F07_24490;Dbxref=NCBI_GP:TGD50499.1;Name=TGD50499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001315977.1;locus_tag=C9F07_24490;product=primosomal replication protein N;protein_id=TGD50499.1;transl_table=11 PYKI01002480.1 Genbank gene 1358 1585 . + . ID=gene-C9F07_24495;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=C9F07_24495 PYKI01002480.1 Protein Homology CDS 1358 1585 . + 0 ID=cds-TGD50500.1;Parent=gene-C9F07_24495;Dbxref=NCBI_GP:TGD50500.1;Name=TGD50500.1;gbkey=CDS;gene=rpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=C9F07_24495;product=30S ribosomal protein S18;protein_id=TGD50500.1;transl_table=11 PYKI01002480.1 Genbank gene 1627 2076 . + . ID=gene-C9F07_24500;Name=C9F07_24500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24500 PYKI01002480.1 Protein Homology CDS 1627 2076 . + 0 ID=cds-TGD50501.1;Parent=gene-C9F07_24500;Dbxref=NCBI_GP:TGD50501.1;Name=TGD50501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=C9F07_24500;product=50S ribosomal protein L9;protein_id=TGD50501.1;transl_table=11 ##sequence-region PYKI01002412.1 1 2207 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002412.1 Genbank region 1 2207 . + . ID=PYKI01002412.1:1..2207;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002412.1 Genbank gene 1 224 . + . ID=gene-C9F07_23840;Name=C9F07_23840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23840;partial=true;start_range=.,1 PYKI01002412.1 Protein Homology CDS 1 224 . + 2 ID=cds-TGD51686.1;Parent=gene-C9F07_23840;Dbxref=NCBI_GP:TGD51686.1;Name=TGD51686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455755.1;locus_tag=C9F07_23840;partial=true;product=hypothetical protein;protein_id=TGD51686.1;start_range=.,1;transl_table=11 PYKI01002412.1 Genbank gene 221 1225 . + . ID=gene-C9F07_23845;Name=C9F07_23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23845 PYKI01002412.1 Protein Homology CDS 221 1225 . + 0 ID=cds-TGD51687.1;Parent=gene-C9F07_23845;Dbxref=NCBI_GP:TGD51687.1;Name=TGD51687.1;Note=with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=C9F07_23845;product=oligopeptide ABC transporter ATP-binding protein OppF;protein_id=TGD51687.1;transl_table=11 PYKI01002412.1 Genbank gene 1273 2109 . + . ID=gene-C9F07_23850;Name=C9F07_23850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23850 PYKI01002412.1 Protein Homology CDS 1273 2109 . + 0 ID=cds-TGD51688.1;Parent=gene-C9F07_23850;Dbxref=NCBI_GP:TGD51688.1;Name=TGD51688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=C9F07_23850;product=transporter;protein_id=TGD51688.1;transl_table=11 ##sequence-region PYKI01002285.1 1 2206 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002285.1 Genbank region 1 2206 . + . ID=PYKI01002285.1:1..2206;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002285.1 Genbank gene 1 668 . - . ID=gene-C9F07_22390;Name=C9F07_22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22390;partial=true;start_range=.,1 PYKI01002285.1 Protein Homology CDS 1 668 . - 0 ID=cds-TGD54836.1;Parent=gene-C9F07_22390;Dbxref=NCBI_GP:TGD54836.1;Name=TGD54836.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457554.1;locus_tag=C9F07_22390;partial=true;product=cystathionine beta-lyase;protein_id=TGD54836.1;start_range=.,1;transl_table=11 PYKI01002285.1 Genbank gene 778 927 . + . ID=gene-C9F07_22395;Name=C9F07_22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22395 PYKI01002285.1 Protein Homology CDS 778 927 . + 0 ID=cds-TGD54837.1;Parent=gene-C9F07_22395;Dbxref=NCBI_GP:TGD54837.1;Name=TGD54837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462075.1;locus_tag=C9F07_22395;product=hypothetical protein;protein_id=TGD54837.1;transl_table=11 PYKI01002285.1 Genbank gene 920 1654 . + . ID=gene-C9F07_22400;Name=C9F07_22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22400 PYKI01002285.1 Protein Homology CDS 920 1654 . + 0 ID=cds-TGD54838.1;Parent=gene-C9F07_22400;Dbxref=NCBI_GP:TGD54838.1;Name=TGD54838.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457552.1;locus_tag=C9F07_22400;product=biopolymer transporter ExbB;protein_id=TGD54838.1;transl_table=11 PYKI01002285.1 Genbank gene 1661 2086 . + . ID=gene-C9F07_22405;Name=C9F07_22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22405 PYKI01002285.1 Protein Homology CDS 1661 2086 . + 0 ID=cds-TGD54839.1;Parent=gene-C9F07_22405;Dbxref=NCBI_GP:TGD54839.1;Name=TGD54839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457551.1;locus_tag=C9F07_22405;product=TonB system transport protein ExbD;protein_id=TGD54839.1;transl_table=11 ##sequence-region PYKI01001003.1 1 2201 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001003.1 Genbank region 1 2201 . + . ID=PYKI01001003.1:1..2201;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001003.1 Genbank gene 1 551 . - . ID=gene-C9F07_09195;Name=C9F07_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09195;partial=true;start_range=.,1 PYKI01001003.1 Protein Homology CDS 1 551 . - 0 ID=cds-TGD98482.1;Parent=gene-C9F07_09195;Dbxref=NCBI_GP:TGD98482.1;Name=TGD98482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458041.1;locus_tag=C9F07_09195;partial=true;product=translational GTPase TypA;protein_id=TGD98482.1;start_range=.,1;transl_table=11 PYKI01001003.1 Genbank gene 520 948 . + . ID=gene-C9F07_09200;Name=C9F07_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09200 PYKI01001003.1 Protein Homology CDS 520 948 . + 0 ID=cds-TGD98480.1;Parent=gene-C9F07_09200;Dbxref=NCBI_GP:TGD98480.1;Name=TGD98480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453298.1;locus_tag=C9F07_09200;product=hypothetical protein;protein_id=TGD98480.1;transl_table=11 PYKI01001003.1 Genbank gene 927 2201 . + . ID=gene-C9F07_09205;Name=glnA;end_range=2201,.;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=C9F07_09205;partial=true PYKI01001003.1 Protein Homology CDS 927 2201 . + 0 ID=cds-TGD98481.1;Parent=gene-C9F07_09205;Dbxref=NCBI_GP:TGD98481.1;Name=TGD98481.1;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;end_range=2201,.;gbkey=CDS;gene=glnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=C9F07_09205;partial=true;product=glutamine synthetase;protein_id=TGD98481.1;transl_table=11 ##sequence-region PYKI01001422.1 1 2201 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001422.1 Genbank region 1 2201 . + . ID=PYKI01001422.1:1..2201;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001422.1 Genbank pseudogene 7 255 . - . ID=gene-C9F07_13470;Name=C9F07_13470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13470;pseudo=true PYKI01001422.1 Protein Homology CDS 7 255 . - 0 ID=cds-C9F07_13470;Parent=gene-C9F07_13470;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457784.1;locus_tag=C9F07_13470;product=carboxymethylenebutenolidase;pseudo=true;transl_table=11 PYKI01001422.1 Genbank gene 514 1275 . + . ID=gene-C9F07_13475;Name=C9F07_13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13475 PYKI01001422.1 Protein Homology CDS 514 1275 . + 0 ID=cds-TGD83735.1;Parent=gene-C9F07_13475;Dbxref=NCBI_GP:TGD83735.1;Name=TGD83735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457783.1;locus_tag=C9F07_13475;product=uridine phosphorylase;protein_id=TGD83735.1;transl_table=11 PYKI01001422.1 Genbank pseudogene 1415 2113 . + . ID=gene-C9F07_13480;Name=C9F07_13480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13480;pseudo=true PYKI01001422.1 Protein Homology CDS 1415 2113 . + 0 ID=cds-C9F07_13480;Parent=gene-C9F07_13480;Note=YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457782.1;locus_tag=C9F07_13480;product=DNA recombination protein RmuC;pseudo=true;transl_table=11 ##sequence-region PYKI01002854.1 1 2194 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002854.1 Genbank region 1 2194 . + . ID=PYKI01002854.1:1..2194;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002854.1 Genbank gene 1 406 . - . ID=gene-C9F07_28520;Name=C9F07_28520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28520;partial=true;start_range=.,1 PYKI01002854.1 Protein Homology CDS 1 406 . - 0 ID=cds-TGD45524.1;Parent=gene-C9F07_28520;Dbxref=NCBI_GP:TGD45524.1;Name=TGD45524.1;Note=citryl-ACP lyase%3B catalyzes the formation of acetate and oxaloacetate from citrate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454671.1;locus_tag=C9F07_28520;partial=true;product=citrate lyase subunit beta;protein_id=TGD45524.1;start_range=.,1;transl_table=11 PYKI01002854.1 Genbank gene 403 696 . - . ID=gene-C9F07_28525;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=C9F07_28525 PYKI01002854.1 Protein Homology CDS 403 696 . - 0 ID=cds-TGD45525.1;Parent=gene-C9F07_28525;Dbxref=NCBI_GP:TGD45525.1;Name=TGD45525.1;gbkey=CDS;gene=citD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454670.1;locus_tag=C9F07_28525;product=citrate lyase acyl carrier protein;protein_id=TGD45525.1;transl_table=11 PYKI01002854.1 Genbank gene 726 1769 . - . ID=gene-C9F07_28530;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=C9F07_28530 PYKI01002854.1 Protein Homology CDS 726 1769 . - 0 ID=cds-TGD45526.1;Parent=gene-C9F07_28530;Dbxref=NCBI_GP:TGD45526.1;Name=TGD45526.1;gbkey=CDS;gene=citC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454669.1;locus_tag=C9F07_28530;product=[citrate (pro-3S)-lyase] ligase;protein_id=TGD45526.1;transl_table=11 PYKI01002854.1 Genbank gene 2014 2194 . + . ID=gene-C9F07_28535;Name=C9F07_28535;end_range=2194,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28535;partial=true PYKI01002854.1 Protein Homology CDS 2014 2194 . + 0 ID=cds-TGD45527.1;Parent=gene-C9F07_28535;Dbxref=NCBI_GP:TGD45527.1;Name=TGD45527.1;end_range=2194,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454668.1;locus_tag=C9F07_28535;partial=true;product=citrate:sodium symporter;protein_id=TGD45527.1;transl_table=11 ##sequence-region PYKI01000805.1 1 2191 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000805.1 Genbank region 1 2191 . + . ID=PYKI01000805.1:1..2191;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000805.1 Genbank pseudogene 40 207 . - . ID=gene-C9F07_07245;Name=garR;gbkey=Gene;gene=garR;gene_biotype=pseudogene;locus_tag=C9F07_07245;pseudo=true PYKI01000805.1 Protein Homology CDS 40 207 . - 0 ID=cds-C9F07_07245;Parent=gene-C9F07_07245;Note=catalyzes the reduction of tartronate semialdehyde to glycerate%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=garR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=C9F07_07245;product=2-hydroxy-3-oxopropionate reductase;pseudo=true;transl_table=11 PYKI01000805.1 Genbank gene 233 1003 . - . ID=gene-C9F07_07250;Name=C9F07_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07250 PYKI01000805.1 Protein Homology CDS 233 1003 . - 0 ID=cds-TGE09131.1;Parent=gene-C9F07_07250;Dbxref=NCBI_GP:TGE09131.1;Name=TGE09131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457635.1;locus_tag=C9F07_07250;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=TGE09131.1;transl_table=11 PYKI01000805.1 Genbank pseudogene 1533 2132 . + . ID=gene-C9F07_07255;Name=garD;gbkey=Gene;gene=garD;gene_biotype=pseudogene;locus_tag=C9F07_07255;pseudo=true PYKI01000805.1 Protein Homology CDS 1533 2132 . + 0 ID=cds-C9F07_07255;Parent=gene-C9F07_07255;Note=catalyzes the formation of 5-dehydro-4-deoxy-D-glucarate from D-galactarate%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=garD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457636.1;locus_tag=C9F07_07255;product=galactarate dehydratase;pseudo=true;transl_table=11 ##sequence-region PYKI01003493.1 1 4941 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003493.1 Genbank region 1 4941 . + . ID=PYKI01003493.1:1..4941;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003493.1 Genbank gene 1 657 . - . ID=gene-C9F07_35135;Name=C9F07_35135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35135;partial=true;start_range=.,1 PYKI01003493.1 Protein Homology CDS 1 657 . - 0 ID=cds-TGD32179.1;Parent=gene-C9F07_35135;Dbxref=NCBI_GP:TGD32179.1;Name=TGD32179.1;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454772.1;locus_tag=C9F07_35135;partial=true;product=aconitate hydratase B;protein_id=TGD32179.1;start_range=.,1;transl_table=11 PYKI01003493.1 Genbank pseudogene 638 767 . - . ID=gene-C9F07_35140;Name=C9F07_35140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35140;pseudo=true PYKI01003493.1 Protein Homology CDS 638 767 . - 0 ID=cds-C9F07_35140;Parent=gene-C9F07_35140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480366.1;locus_tag=C9F07_35140;product=aconitate hydratase;pseudo=true;transl_table=11 PYKI01003493.1 Genbank gene 1046 2668 . + . ID=gene-C9F07_35145;Name=C9F07_35145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35145 PYKI01003493.1 Protein Homology CDS 1046 2668 . + 0 ID=cds-TGD32175.1;Parent=gene-C9F07_35145;Dbxref=NCBI_GP:TGD32175.1;Name=TGD32175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454771.1;locus_tag=C9F07_35145;product=DUF3300 domain-containing protein;protein_id=TGD32175.1;transl_table=11 PYKI01003493.1 Genbank gene 2681 3472 . + . ID=gene-C9F07_35150;Name=C9F07_35150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35150 PYKI01003493.1 Protein Homology CDS 2681 3472 . + 0 ID=cds-TGD32176.1;Parent=gene-C9F07_35150;Dbxref=NCBI_GP:TGD32176.1;Name=TGD32176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454770.1;locus_tag=C9F07_35150;product=DUF2950 domain-containing protein;protein_id=TGD32176.1;transl_table=11 PYKI01003493.1 Genbank gene 3510 3794 . - . ID=gene-C9F07_35155;Name=C9F07_35155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35155 PYKI01003493.1 Protein Homology CDS 3510 3794 . - 0 ID=cds-TGD32177.1;Parent=gene-C9F07_35155;Dbxref=NCBI_GP:TGD32177.1;Name=TGD32177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454769.1;locus_tag=C9F07_35155;product=outer membrane protein;protein_id=TGD32177.1;transl_table=11 PYKI01003493.1 Genbank gene 4083 4941 . - . ID=gene-C9F07_35160;Name=C9F07_35160;end_range=4941,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35160;partial=true PYKI01003493.1 Protein Homology CDS 4083 4941 . - 1 ID=cds-TGD32178.1;Parent=gene-C9F07_35160;Dbxref=NCBI_GP:TGD32178.1;Name=TGD32178.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;end_range=4941,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=C9F07_35160;partial=true;product=dihydrolipoyl dehydrogenase;protein_id=TGD32178.1;transl_table=11 ##sequence-region PYKI01001820.1 1 2190 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001820.1 Genbank region 1 2190 . + . ID=PYKI01001820.1:1..2190;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001820.1 Genbank gene 1 105 . + . ID=gene-C9F07_17500;Name=C9F07_17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17500;partial=true;start_range=.,1 PYKI01001820.1 Protein Homology CDS 1 105 . + 0 ID=cds-TGD64790.1;Parent=gene-C9F07_17500;Dbxref=NCBI_GP:TGD64790.1;Name=TGD64790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455168.1;locus_tag=C9F07_17500;partial=true;product=ferric enterobactin transporter permease FepD;protein_id=TGD64790.1;start_range=.,1;transl_table=11 PYKI01001820.1 Genbank gene 105 1094 . + . ID=gene-C9F07_17505;Name=C9F07_17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17505 PYKI01001820.1 Protein Homology CDS 105 1094 . + 0 ID=cds-TGD64791.1;Parent=gene-C9F07_17505;Dbxref=NCBI_GP:TGD64791.1;Name=TGD64791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455167.1;locus_tag=C9F07_17505;product=iron-enterobactin ABC transporter permease;protein_id=TGD64791.1;transl_table=11 PYKI01001820.1 Genbank gene 1091 1885 . + . ID=gene-C9F07_17510;Name=C9F07_17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17510 PYKI01001820.1 Protein Homology CDS 1091 1885 . + 0 ID=cds-TGD64792.1;Parent=gene-C9F07_17510;Dbxref=NCBI_GP:TGD64792.1;Name=TGD64792.1;Note=with FepBDE is involved in the transport of ferric enterobactin;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455166.1;locus_tag=C9F07_17510;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=TGD64792.1;transl_table=11 PYKI01001820.1 Genbank gene 1939 2190 . - . ID=gene-C9F07_17515;Name=C9F07_17515;end_range=2190,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17515;partial=true PYKI01001820.1 Protein Homology CDS 1939 2190 . - 0 ID=cds-TGD64793.1;Parent=gene-C9F07_17515;Dbxref=NCBI_GP:TGD64793.1;Name=TGD64793.1;Note=in Salmonella is responsible for long O-antigen polymerization%3B may be part of the ferric enterobactin transport system%3B necessary for enetrobactin uptake;end_range=2190,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=C9F07_17515;partial=true;product=LPS O-antigen length regulator;protein_id=TGD64793.1;transl_table=11 ##sequence-region PYKI01002429.1 1 2189 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002429.1 Genbank region 1 2189 . + . ID=PYKI01002429.1:1..2189;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002429.1 Genbank pseudogene 44 571 . - . ID=gene-C9F07_24000;Name=C9F07_24000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24000;pseudo=true PYKI01002429.1 Protein Homology CDS 44 571 . - 0 ID=cds-C9F07_24000;Parent=gene-C9F07_24000;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457762.1;locus_tag=C9F07_24000;product=adenine-specific DNA-methyltransferase;pseudo=true;transl_table=11 PYKI01002429.1 Genbank gene 657 953 . - . ID=gene-C9F07_24005;Name=C9F07_24005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24005 PYKI01002429.1 Protein Homology CDS 657 953 . - 0 ID=cds-TGD51292.1;Parent=gene-C9F07_24005;Dbxref=NCBI_GP:TGD51292.1;Name=TGD51292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=C9F07_24005;product=Fis family transcriptional regulator;protein_id=TGD51292.1;transl_table=11 PYKI01002429.1 Genbank gene 979 1944 . - . ID=gene-C9F07_24010;Name=C9F07_24010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24010 PYKI01002429.1 Protein Homology CDS 979 1944 . - 0 ID=cds-TGD51293.1;Parent=gene-C9F07_24010;Dbxref=NCBI_GP:TGD51293.1;Name=TGD51293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=C9F07_24010;product=tRNA dihydrouridine synthase DusB;protein_id=TGD51293.1;transl_table=11 ##sequence-region PYKI01002521.1 1 2184 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002521.1 Genbank region 1 2184 . + . ID=PYKI01002521.1:1..2184;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002521.1 Genbank gene 6 1199 . + . ID=gene-C9F07_24995;Name=C9F07_24995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24995 PYKI01002521.1 Protein Homology CDS 6 1199 . + 0 ID=cds-TGD50111.1;Parent=gene-C9F07_24995;Dbxref=NCBI_GP:TGD50111.1;Name=TGD50111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455648.1;locus_tag=C9F07_24995;product=multidrug transporter MdtG;protein_id=TGD50111.1;transl_table=11 PYKI01002521.1 Genbank gene 1281 1655 . + . ID=gene-C9F07_25000;Name=C9F07_25000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25000 PYKI01002521.1 Protein Homology CDS 1281 1655 . + 0 ID=cds-TGD50109.1;Parent=gene-C9F07_25000;Dbxref=NCBI_GP:TGD50109.1;Name=TGD50109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455647.1;locus_tag=C9F07_25000;product=secY/secA suppressor protein;protein_id=TGD50109.1;transl_table=11 PYKI01002521.1 Genbank gene 1656 1883 . - . ID=gene-C9F07_25005;Name=C9F07_25005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25005 PYKI01002521.1 Protein Homology CDS 1656 1883 . - 0 ID=cds-TGD50112.1;Parent=gene-C9F07_25005;Dbxref=NCBI_GP:TGD50112.1;Name=TGD50112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455646.1;locus_tag=C9F07_25005;product=YceK/YidQ family lipoprotein;protein_id=TGD50112.1;transl_table=11 PYKI01002521.1 Genbank gene 1957 2184 . - . ID=gene-C9F07_25010;Name=C9F07_25010;end_range=2184,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25010;partial=true PYKI01002521.1 Protein Homology CDS 1957 2184 . - 0 ID=cds-TGD50110.1;Parent=gene-C9F07_25010;Dbxref=NCBI_GP:TGD50110.1;Name=TGD50110.1;end_range=2184,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455645.1;locus_tag=C9F07_25010;partial=true;product=hypothetical protein;protein_id=TGD50110.1;transl_table=11 ##sequence-region PYKI01001223.1 1 2181 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001223.1 Genbank region 1 2181 . + . ID=PYKI01001223.1:1..2181;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001223.1 Genbank gene 1 410 . + . ID=gene-C9F07_11445;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=C9F07_11445;partial=true;start_range=.,1 PYKI01001223.1 Protein Homology CDS 1 410 . + 2 ID=cds-TGD91149.1;Parent=gene-C9F07_11445;Dbxref=NCBI_GP:TGD91149.1;Name=TGD91149.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=C9F07_11445;partial=true;product=acetolactate synthase small subunit;protein_id=TGD91149.1;start_range=.,1;transl_table=11 PYKI01001223.1 Genbank gene 694 1698 . + . ID=gene-C9F07_11450;Name=C9F07_11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11450 PYKI01001223.1 Protein Homology CDS 694 1698 . + 0 ID=cds-TGD91150.1;Parent=gene-C9F07_11450;Dbxref=NCBI_GP:TGD91150.1;Name=TGD91150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454730.1;locus_tag=C9F07_11450;product=catabolite repressor/activator;protein_id=TGD91150.1;transl_table=11 ##sequence-region PYKI01003036.1 1 2180 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003036.1 Genbank region 1 2180 . + . ID=PYKI01003036.1:1..2180;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003036.1 Genbank pseudogene 81 176 . - . ID=gene-C9F07_30465;Name=C9F07_30465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30465;pseudo=true PYKI01003036.1 Protein Homology CDS 81 176 . - 0 ID=cds-C9F07_30465;Parent=gene-C9F07_30465;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966857.1;locus_tag=C9F07_30465;product=protein ninB;pseudo=true;transl_table=11 PYKI01003036.1 Genbank gene 179 499 . - . ID=gene-C9F07_30470;Name=C9F07_30470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30470 PYKI01003036.1 Protein Homology CDS 179 499 . - 0 ID=cds-TGD41063.1;Parent=gene-C9F07_30470;Dbxref=NCBI_GP:TGD41063.1;Name=TGD41063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000344548.1;locus_tag=C9F07_30470;product=hypothetical protein;protein_id=TGD41063.1;transl_table=11 PYKI01003036.1 Genbank gene 511 711 . - . ID=gene-C9F07_30475;Name=C9F07_30475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30475 PYKI01003036.1 Protein Homology CDS 511 711 . - 0 ID=cds-TGD41064.1;Parent=gene-C9F07_30475;Dbxref=NCBI_GP:TGD41064.1;Name=TGD41064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049638.1;locus_tag=C9F07_30475;product=hypothetical protein;protein_id=TGD41064.1;transl_table=11 PYKI01003036.1 Genbank gene 708 1034 . - . ID=gene-C9F07_30480;Name=C9F07_30480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30480 PYKI01003036.1 Protein Homology CDS 708 1034 . - 0 ID=cds-TGD41065.1;Parent=gene-C9F07_30480;Dbxref=NCBI_GP:TGD41065.1;Name=TGD41065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000796280.1;locus_tag=C9F07_30480;product=hypothetical protein;protein_id=TGD41065.1;transl_table=11 PYKI01003036.1 Genbank gene 1107 1397 . - . ID=gene-C9F07_30485;Name=C9F07_30485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30485 PYKI01003036.1 Protein Homology CDS 1107 1397 . - 0 ID=cds-TGD41066.1;Parent=gene-C9F07_30485;Dbxref=NCBI_GP:TGD41066.1;Name=TGD41066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549470.1;locus_tag=C9F07_30485;product=hypothetical protein;protein_id=TGD41066.1;transl_table=11 PYKI01003036.1 Genbank pseudogene 1394 2071 . - . ID=gene-C9F07_30490;Name=C9F07_30490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30490;pseudo=true PYKI01003036.1 Protein Homology CDS 1394 2071 . - 0 ID=cds-C9F07_30490;Parent=gene-C9F07_30490;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725493.1;locus_tag=C9F07_30490;product=ATP-binding protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002770.1 1 2179 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002770.1 Genbank region 1 2179 . + . ID=PYKI01002770.1:1..2179;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002770.1 Genbank pseudogene 1 508 . + . ID=gene-C9F07_27670;Name=C9F07_27670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27670;pseudo=true PYKI01002770.1 Protein Homology CDS 1 508 . + 1 ID=cds-C9F07_27670;Parent=gene-C9F07_27670;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=C9F07_27670;product=transcription antiterminator BglG;pseudo=true;transl_table=11 PYKI01002770.1 Genbank gene 586 828 . + . ID=gene-C9F07_27675;Name=C9F07_27675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27675 PYKI01002770.1 Protein Homology CDS 586 828 . + 0 ID=cds-TGD46487.1;Parent=gene-C9F07_27675;Dbxref=NCBI_GP:TGD46487.1;Name=TGD46487.1;Note=Qin prophage%3B bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/transcriptional repressor;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458866.1;locus_tag=C9F07_27675;product=type II toxin-antitoxin system antitoxin%2C RelB/DinJ family;protein_id=TGD46487.1;transl_table=11 PYKI01002770.1 Genbank gene 818 1102 . + . ID=gene-C9F07_27680;Name=C9F07_27680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27680 PYKI01002770.1 Protein Homology CDS 818 1102 . + 0 ID=cds-TGD46488.1;Parent=gene-C9F07_27680;Dbxref=NCBI_GP:TGD46488.1;Name=TGD46488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458867.1;locus_tag=C9F07_27680;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=TGD46488.1;transl_table=11 PYKI01002770.1 Genbank gene 1106 1570 . - . ID=gene-C9F07_27685;Name=C9F07_27685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27685 PYKI01002770.1 Protein Homology CDS 1106 1570 . - 0 ID=cds-TGD46489.1;Parent=gene-C9F07_27685;Dbxref=NCBI_GP:TGD46489.1;Name=TGD46489.1;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=C9F07_27685;product=anaerobic ribonucleotide reductase-activating protein;protein_id=TGD46489.1;transl_table=11 PYKI01002770.1 Genbank pseudogene 1787 2179 . - . ID=gene-C9F07_27690;Name=C9F07_27690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27690;pseudo=true PYKI01002770.1 Protein Homology CDS 1787 2179 . - 0 ID=cds-C9F07_27690;Parent=gene-C9F07_27690;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458869.1;locus_tag=C9F07_27690;product=anaerobic ribonucleoside triphosphate reductase;pseudo=true;transl_table=11 ##sequence-region PYKI01001407.1 1 2176 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001407.1 Genbank region 1 2176 . + . ID=PYKI01001407.1:1..2176;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001407.1 Genbank gene 1 698 . + . ID=gene-C9F07_13305;Name=C9F07_13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13305;partial=true;start_range=.,1 PYKI01001407.1 Protein Homology CDS 1 698 . + 2 ID=cds-TGD83912.1;Parent=gene-C9F07_13305;Dbxref=NCBI_GP:TGD83912.1;Name=TGD83912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=C9F07_13305;partial=true;product=alpha/beta hydrolase;protein_id=TGD83912.1;start_range=.,1;transl_table=11 PYKI01001407.1 Genbank gene 880 1923 . + . ID=gene-C9F07_13310;Name=C9F07_13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13310 PYKI01001407.1 Protein Homology CDS 880 1923 . + 0 ID=cds-TGD83913.1;Parent=gene-C9F07_13310;Dbxref=NCBI_GP:TGD83913.1;Name=TGD83913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457079.1;locus_tag=C9F07_13310;product=anaerobic sulfite reductase subunit A;protein_id=TGD83913.1;transl_table=11 PYKI01001407.1 Genbank pseudogene 1927 2160 . + . ID=gene-C9F07_13315;Name=C9F07_13315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13315;pseudo=true PYKI01001407.1 Protein Homology CDS 1927 2160 . + 0 ID=cds-C9F07_13315;Parent=gene-C9F07_13315;Note=with AsrAC catalyzes the reduction of sulfite to hydrogen sulfide%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457080.1;locus_tag=C9F07_13315;product=anaerobic sulfite reductase subunit AsrB;pseudo=true;transl_table=11 ##sequence-region PYKI01001086.1 1 2176 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001086.1 Genbank region 1 2176 . + . ID=PYKI01001086.1:1..2176;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001086.1 Genbank gene 95 841 . + . ID=gene-C9F07_10120;Name=C9F07_10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10120 PYKI01001086.1 Protein Homology CDS 95 841 . + 0 ID=cds-TGD95563.1;Parent=gene-C9F07_10120;Dbxref=NCBI_GP:TGD95563.1;Name=TGD95563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=C9F07_10120;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=TGD95563.1;transl_table=11 PYKI01001086.1 Genbank gene 1052 1945 . + . ID=gene-C9F07_10125;Name=C9F07_10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10125 PYKI01001086.1 Protein Homology CDS 1052 1945 . + 0 ID=cds-TGD95564.1;Parent=gene-C9F07_10125;Dbxref=NCBI_GP:TGD95564.1;Name=TGD95564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455475.1;locus_tag=C9F07_10125;product=hypothetical protein;protein_id=TGD95564.1;transl_table=11 PYKI01001086.1 Genbank gene 1925 2176 . - . ID=gene-C9F07_10130;Name=C9F07_10130;end_range=2176,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10130;partial=true PYKI01001086.1 Protein Homology CDS 1925 2176 . - 0 ID=cds-TGD95565.1;Parent=gene-C9F07_10130;Dbxref=NCBI_GP:TGD95565.1;Name=TGD95565.1;end_range=2176,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455476.1;locus_tag=C9F07_10130;partial=true;product=envelope biogenesis factor ElyC;protein_id=TGD95565.1;transl_table=11 ##sequence-region PYKI01002801.1 1 4881 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002801.1 Genbank region 1 4881 . + . ID=PYKI01002801.1:1..4881;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002801.1 Genbank gene 1 511 . + . ID=gene-C9F07_28030;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=C9F07_28030;partial=true;start_range=.,1 PYKI01002801.1 Protein Homology CDS 1 511 . + 1 ID=cds-TGD45844.1;Parent=gene-C9F07_28030;Dbxref=NCBI_GP:TGD45844.1;Name=TGD45844.1;gbkey=CDS;gene=hypD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457251.1;locus_tag=C9F07_28030;partial=true;product=hydrogenase formation protein HypD;protein_id=TGD45844.1;start_range=.,1;transl_table=11 PYKI01002801.1 Genbank gene 508 1518 . + . ID=gene-C9F07_28035;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=C9F07_28035 PYKI01002801.1 Protein Homology CDS 508 1518 . + 0 ID=cds-TGD45845.1;Parent=gene-C9F07_28035;Dbxref=NCBI_GP:TGD45845.1;Name=TGD45845.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=C9F07_28035;product=hydrogenase expression/formation protein HypE;protein_id=TGD45845.1;transl_table=11 PYKI01002801.1 Genbank gene 1737 3815 . + . ID=gene-C9F07_28040;Name=C9F07_28040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28040 PYKI01002801.1 Protein Homology CDS 1737 3815 . + 0 ID=cds-TGD45846.1;Parent=gene-C9F07_28040;Dbxref=NCBI_GP:TGD45846.1;Name=TGD45846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=C9F07_28040;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=TGD45846.1;transl_table=11 PYKI01002801.1 Genbank gene 3877 4221 . - . ID=gene-C9F07_28045;Name=C9F07_28045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28045 PYKI01002801.1 Protein Homology CDS 3877 4221 . - 0 ID=cds-TGD45847.1;Parent=gene-C9F07_28045;Dbxref=NCBI_GP:TGD45847.1;Name=TGD45847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457254.1;locus_tag=C9F07_28045;product=nitrous oxide-stimulated promoter family protein;protein_id=TGD45847.1;transl_table=11 PYKI01002801.1 Genbank gene 4403 4881 . + . ID=gene-C9F07_28050;Name=C9F07_28050;end_range=4881,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28050;partial=true PYKI01002801.1 Protein Homology CDS 4403 4881 . + 0 ID=cds-TGD45848.1;Parent=gene-C9F07_28050;Dbxref=NCBI_GP:TGD45848.1;Name=TGD45848.1;end_range=4881,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457255.1;locus_tag=C9F07_28050;partial=true;product=iron ABC transporter substrate-binding protein;protein_id=TGD45848.1;transl_table=11 ##sequence-region PYKI01001210.1 1 2175 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001210.1 Genbank region 1 2175 . + . ID=PYKI01001210.1:1..2175;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001210.1 Genbank gene 1 154 . - . ID=gene-C9F07_11330;Name=C9F07_11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11330;partial=true;start_range=.,1 PYKI01001210.1 Protein Homology CDS 1 154 . - 0 ID=cds-TGD91398.1;Parent=gene-C9F07_11330;Dbxref=NCBI_GP:TGD91398.1;Name=TGD91398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311713.1;locus_tag=C9F07_11330;partial=true;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=TGD91398.1;start_range=.,1;transl_table=11 PYKI01001210.1 Genbank gene 167 697 . - . ID=gene-C9F07_11335;Name=C9F07_11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11335 PYKI01001210.1 Protein Homology CDS 167 697 . - 0 ID=cds-TGD91399.1;Parent=gene-C9F07_11335;Dbxref=NCBI_GP:TGD91399.1;Name=TGD91399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803569.1;locus_tag=C9F07_11335;product=RNA pyrophosphohydrolase;protein_id=TGD91399.1;transl_table=11 PYKI01001210.1 Genbank gene 1380 2075 . + . ID=gene-C9F07_11340;Name=C9F07_11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11340 PYKI01001210.1 Protein Homology CDS 1380 2075 . + 0 ID=cds-TGD91400.1;Parent=gene-C9F07_11340;Dbxref=NCBI_GP:TGD91400.1;Name=TGD91400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=C9F07_11340;product=DNA mismatch repair endonuclease MutH;protein_id=TGD91400.1;transl_table=11 ##sequence-region PYKI01003019.1 1 2174 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003019.1 Genbank region 1 2174 . + . ID=PYKI01003019.1:1..2174;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003019.1 Genbank pseudogene 70 1062 . - . ID=gene-C9F07_30270;Name=C9F07_30270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30270;pseudo=true PYKI01003019.1 Protein Homology CDS 70 1062 . - 0 ID=cds-C9F07_30270;Parent=gene-C9F07_30270;Note=ethanolamine utilization protein%3B catalyzes the formation of acetyl-CoA from acetaldehyde%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=C9F07_30270;product=aldehyde dehydrogenase EutE;pseudo=true;transl_table=11 PYKI01003019.1 Genbank gene 1074 1373 . - . ID=gene-C9F07_30275;Name=C9F07_30275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30275 PYKI01003019.1 Protein Homology CDS 1074 1373 . - 0 ID=cds-TGD41142.1;Parent=gene-C9F07_30275;Dbxref=NCBI_GP:TGD41142.1;Name=TGD41142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461399.3;locus_tag=C9F07_30275;product=ethanolamine utilization protein EutN;protein_id=TGD41142.1;transl_table=11 PYKI01003019.1 Genbank gene 1474 1764 . - . ID=gene-C9F07_30280;Name=C9F07_30280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30280 PYKI01003019.1 Protein Homology CDS 1474 1764 . - 0 ID=cds-TGD41143.1;Parent=gene-C9F07_30280;Dbxref=NCBI_GP:TGD41143.1;Name=TGD41143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=C9F07_30280;product=ethanolamine utilization protein EutM;protein_id=TGD41143.1;transl_table=11 PYKI01003019.1 Genbank gene 1805 2174 . - . ID=gene-C9F07_30285;Name=C9F07_30285;end_range=2174,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30285;partial=true PYKI01003019.1 Protein Homology CDS 1805 2174 . - 1 ID=cds-TGD41144.1;Parent=gene-C9F07_30285;Dbxref=NCBI_GP:TGD41144.1;Name=TGD41144.1;end_range=2174,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457000.1;locus_tag=C9F07_30285;partial=true;product=phosphate acetyltransferase;protein_id=TGD41144.1;transl_table=11 ##sequence-region PYKI01000562.1 1 2174 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000562.1 Genbank region 1 2174 . + . ID=PYKI01000562.1:1..2174;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000562.1 Genbank gene 267 2174 . + . ID=gene-C9F07_04750;Name=C9F07_04750;end_range=2174,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04750;partial=true PYKI01000562.1 Protein Homology CDS 267 2174 . + 0 ID=cds-TGE14807.1;Parent=gene-C9F07_04750;Dbxref=NCBI_GP:TGE14807.1;Name=TGE14807.1;end_range=2174,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=C9F07_04750;partial=true;product=ComEC family protein;protein_id=TGE14807.1;transl_table=11 ##sequence-region PYKI01001094.1 1 2171 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001094.1 Genbank region 1 2171 . + . ID=PYKI01001094.1:1..2171;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001094.1 Genbank gene 1 672 . - . ID=gene-C9F07_10185;Name=C9F07_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10185;partial=true;start_range=.,1 PYKI01001094.1 Protein Homology CDS 1 672 . - 0 ID=cds-TGD95394.1;Parent=gene-C9F07_10185;Dbxref=NCBI_GP:TGD95394.1;Name=TGD95394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458111.1;locus_tag=C9F07_10185;partial=true;product=sugar-phosphatase;protein_id=TGD95394.1;start_range=.,1;transl_table=11 PYKI01001094.1 Genbank gene 977 2171 . + . ID=gene-C9F07_10190;Name=C9F07_10190;end_range=2171,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10190;partial=true PYKI01001094.1 Protein Homology CDS 977 2171 . + 0 ID=cds-TGD95395.1;Parent=gene-C9F07_10190;Dbxref=NCBI_GP:TGD95395.1;Name=TGD95395.1;end_range=2171,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462732.1;locus_tag=C9F07_10190;partial=true;product=MFS transporter;protein_id=TGD95395.1;transl_table=11 ##sequence-region PYKI01000686.1 1 2171 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000686.1 Genbank region 1 2171 . + . ID=PYKI01000686.1:1..2171;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000686.1 Genbank gene 1 937 . - . ID=gene-C9F07_05980;Name=C9F07_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05980;partial=true;start_range=.,1 PYKI01000686.1 Protein Homology CDS 1 937 . - 0 ID=cds-TGE11419.1;Parent=gene-C9F07_05980;Dbxref=NCBI_GP:TGE11419.1;Name=TGE11419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456199.1;locus_tag=C9F07_05980;partial=true;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=TGE11419.1;start_range=.,1;transl_table=11 PYKI01000686.1 Genbank gene 1020 1340 . - . ID=gene-C9F07_05985;Name=C9F07_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05985 PYKI01000686.1 Protein Homology CDS 1020 1340 . - 0 ID=cds-TGE11420.1;Parent=gene-C9F07_05985;Dbxref=NCBI_GP:TGE11420.1;Name=TGE11420.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456200.1;locus_tag=C9F07_05985;product=PTS sugar transporter subunit IIB;protein_id=TGE11420.1;transl_table=11 PYKI01000686.1 Genbank pseudogene 1324 1456 . + . ID=gene-C9F07_05990;Name=C9F07_05990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05990;pseudo=true PYKI01000686.1 Protein Homology CDS 1324 1456 . + 0 ID=cds-C9F07_05990;Parent=gene-C9F07_05990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322861.1;locus_tag=C9F07_05990;product=acetyltransferase;pseudo=true;transl_table=11 PYKI01000686.1 Genbank gene 1641 1982 . - . ID=gene-C9F07_05995;Name=C9F07_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05995 PYKI01000686.1 Protein Homology CDS 1641 1982 . - 0 ID=cds-TGE11421.1;Parent=gene-C9F07_05995;Dbxref=NCBI_GP:TGE11421.1;Name=TGE11421.1;Note=osmotically-inducible lipoprotein E%3B activator of ntr-like gene protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456201.1;locus_tag=C9F07_05995;product=osmotically-inducible lipoprotein OsmE;protein_id=TGE11421.1;transl_table=11 ##sequence-region PYKI01000354.1 1 2170 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000354.1 Genbank region 1 2170 . + . ID=PYKI01000354.1:1..2170;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000354.1 Genbank gene 1 310 . + . ID=gene-C9F07_02650;Name=C9F07_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02650;partial=true;start_range=.,1 PYKI01000354.1 Protein Homology CDS 1 310 . + 1 ID=cds-TGE26808.1;Parent=gene-C9F07_02650;Dbxref=NCBI_GP:TGE26808.1;Name=TGE26808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458190.1;locus_tag=C9F07_02650;partial=true;product=LysR family transcriptional regulator;protein_id=TGE26808.1;start_range=.,1;transl_table=11 PYKI01000354.1 Genbank gene 358 1221 . - . ID=gene-C9F07_02655;Name=C9F07_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02655 PYKI01000354.1 Protein Homology CDS 358 1221 . - 0 ID=cds-TGE26809.1;Parent=gene-C9F07_02655;Dbxref=NCBI_GP:TGE26809.1;Name=TGE26809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=C9F07_02655;product=YicC family protein;protein_id=TGE26809.1;transl_table=11 PYKI01000354.1 Genbank gene 1236 1415 . - . ID=gene-C9F07_02660;Name=C9F07_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02660 PYKI01000354.1 Protein Homology CDS 1236 1415 . - 0 ID=cds-TGE26811.1;Parent=gene-C9F07_02660;Dbxref=NCBI_GP:TGE26811.1;Name=TGE26811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001599866.1;locus_tag=C9F07_02660;product=hypothetical protein;protein_id=TGE26811.1;transl_table=11 PYKI01000354.1 Genbank gene 1347 2063 . + . ID=gene-C9F07_02665;Name=C9F07_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02665 PYKI01000354.1 Protein Homology CDS 1347 2063 . + 0 ID=cds-TGE26810.1;Parent=gene-C9F07_02665;Dbxref=NCBI_GP:TGE26810.1;Name=TGE26810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=C9F07_02665;product=ribonuclease PH;protein_id=TGE26810.1;transl_table=11 PYKI01000354.1 Genbank gene 2059 2170 . + . ID=gene-C9F07_02670;Name=pyrE;end_range=2170,.;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=C9F07_02670;partial=true PYKI01000354.1 Protein Homology CDS 2059 2170 . + 0 ID=cds-TGE26812.1;Parent=gene-C9F07_02670;Dbxref=NCBI_GP:TGE26812.1;Name=TGE26812.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;end_range=2170,.;gbkey=CDS;gene=pyrE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188112.1;locus_tag=C9F07_02670;partial=true;product=orotate phosphoribosyltransferase;protein_id=TGE26812.1;transl_table=11 ##sequence-region PYKI01001533.1 1 2169 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001533.1 Genbank region 1 2169 . + . ID=PYKI01001533.1:1..2169;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001533.1 Genbank gene 1 330 . - . ID=gene-C9F07_14650;Name=C9F07_14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14650;partial=true;start_range=.,1 PYKI01001533.1 Protein Homology CDS 1 330 . - 0 ID=cds-TGD75975.1;Parent=gene-C9F07_14650;Dbxref=NCBI_GP:TGD75975.1;Name=TGD75975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458905.1;locus_tag=C9F07_14650;partial=true;product=capsid protein;protein_id=TGD75975.1;start_range=.,1;transl_table=11 PYKI01001533.1 Genbank gene 243 431 . + . ID=gene-C9F07_14655;Name=C9F07_14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14655 PYKI01001533.1 Protein Homology CDS 243 431 . + 0 ID=cds-TGD75971.1;Parent=gene-C9F07_14655;Dbxref=NCBI_GP:TGD75971.1;Name=TGD75971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001324066.1;locus_tag=C9F07_14655;product=hypothetical protein;protein_id=TGD75971.1;transl_table=11 PYKI01001533.1 Genbank pseudogene 754 1084 . + . ID=gene-C9F07_14660;Name=C9F07_14660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14660;pseudo=true PYKI01001533.1 Protein Homology CDS 754 1084 . + 0 ID=cds-C9F07_14660;Parent=gene-C9F07_14660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458906.1;locus_tag=C9F07_14660;product=AlpA family transcriptional regulator;pseudo=true;transl_table=11 PYKI01001533.1 Genbank gene 1017 1568 . + . ID=gene-C9F07_14665;Name=C9F07_14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14665 PYKI01001533.1 Protein Homology CDS 1017 1568 . + 0 ID=cds-TGD75972.1;Parent=gene-C9F07_14665;Dbxref=NCBI_GP:TGD75972.1;Name=TGD75972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364305.1;locus_tag=C9F07_14665;product=ASH family protein;protein_id=TGD75972.1;transl_table=11 PYKI01001533.1 Genbank gene 1565 1792 . + . ID=gene-C9F07_14670;Name=C9F07_14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14670 PYKI01001533.1 Protein Homology CDS 1565 1792 . + 0 ID=cds-TGD75973.1;Parent=gene-C9F07_14670;Dbxref=NCBI_GP:TGD75973.1;Name=TGD75973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458908.1;locus_tag=C9F07_14670;product=hypothetical protein;protein_id=TGD75973.1;transl_table=11 PYKI01001533.1 Genbank gene 1789 2109 . + . ID=gene-C9F07_14675;Name=C9F07_14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14675 PYKI01001533.1 Protein Homology CDS 1789 2109 . + 0 ID=cds-TGD75974.1;Parent=gene-C9F07_14675;Dbxref=NCBI_GP:TGD75974.1;Name=TGD75974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458909.1;locus_tag=C9F07_14675;product=hypothetical protein;protein_id=TGD75974.1;transl_table=11 ##sequence-region PYKI01002623.1 1 2169 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002623.1 Genbank region 1 2169 . + . ID=PYKI01002623.1:1..2169;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002623.1 Genbank gene 96 812 . + . ID=gene-C9F07_26105;Name=C9F07_26105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26105 PYKI01002623.1 Protein Homology CDS 96 812 . + 0 ID=cds-TGD49495.1;Parent=gene-C9F07_26105;Dbxref=NCBI_GP:TGD49495.1;Name=TGD49495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739043.1;locus_tag=C9F07_26105;product=transcriptional regulator;protein_id=TGD49495.1;transl_table=11 PYKI01002623.1 Genbank gene 955 2169 . + . ID=gene-C9F07_26110;Name=C9F07_26110;end_range=2169,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26110;partial=true PYKI01002623.1 Protein Homology CDS 955 2169 . + 0 ID=cds-TGD49494.1;Parent=gene-C9F07_26110;Dbxref=NCBI_GP:TGD49494.1;Name=TGD49494.1;end_range=2169,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=C9F07_26110;partial=true;product=hexose-6-phosphate:phosphate antiporter;protein_id=TGD49494.1;transl_table=11 ##sequence-region PYKI01001425.1 1 2166 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001425.1 Genbank region 1 2166 . + . ID=PYKI01001425.1:1..2166;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001425.1 Genbank pseudogene 1 1188 . - . ID=gene-C9F07_13510;Name=C9F07_13510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13510;pseudo=true PYKI01001425.1 Protein Homology CDS 1 1188 . - 0 ID=cds-C9F07_13510;Parent=gene-C9F07_13510;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=C9F07_13510;product=DUF4153 domain-containing protein;pseudo=true;transl_table=11 PYKI01001425.1 Genbank gene 1568 2166 . + . ID=gene-C9F07_13515;Name=C9F07_13515;end_range=2166,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13515;partial=true PYKI01001425.1 Protein Homology CDS 1568 2166 . + 0 ID=cds-TGD83724.1;Parent=gene-C9F07_13515;Dbxref=NCBI_GP:TGD83724.1;Name=TGD83724.1;end_range=2166,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458404.1;locus_tag=C9F07_13515;partial=true;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=TGD83724.1;transl_table=11 ##sequence-region PYKI01000773.1 1 2164 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000773.1 Genbank region 1 2164 . + . ID=PYKI01000773.1:1..2164;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000773.1 Genbank gene 1 1218 . - . ID=gene-C9F07_06880;Name=C9F07_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06880;partial=true;start_range=.,1 PYKI01000773.1 Protein Homology CDS 1 1218 . - 0 ID=cds-TGE09201.1;Parent=gene-C9F07_06880;Dbxref=NCBI_GP:TGE09201.1;Name=TGE09201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458160.1;locus_tag=C9F07_06880;partial=true;product=6-phospho-beta-glucosidase;protein_id=TGE09201.1;start_range=.,1;transl_table=11 PYKI01000773.1 Genbank gene 1324 1617 . - . ID=gene-C9F07_06885;Name=C9F07_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06885 PYKI01000773.1 Protein Homology CDS 1324 1617 . - 0 ID=cds-TGE09202.1;Parent=gene-C9F07_06885;Dbxref=NCBI_GP:TGE09202.1;Name=TGE09202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458161.1;locus_tag=C9F07_06885;product=hypothetical protein;protein_id=TGE09202.1;transl_table=11 PYKI01000773.1 Genbank pseudogene 1814 2086 . + . ID=gene-C9F07_06890;Name=C9F07_06890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06890;pseudo=true PYKI01000773.1 Protein Homology CDS 1814 2086 . + 0 ID=cds-C9F07_06890;Parent=gene-C9F07_06890;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=C9F07_06890;product=transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01000470.1 1 4880 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000470.1 Genbank region 1 4880 . + . ID=PYKI01000470.1:1..4880;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000470.1 Genbank pseudogene 1 78 . + . ID=gene-C9F07_03705;Name=C9F07_03705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03705;pseudo=true PYKI01000470.1 Protein Homology CDS 1 78 . + 0 ID=cds-C9F07_03705;Parent=gene-C9F07_03705;Note=converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457322.1;locus_tag=C9F07_03705;product=adenylyl-sulfate kinase;pseudo=true;transl_table=11 PYKI01000470.1 Genbank gene 87 692 . + . ID=gene-C9F07_03710;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=C9F07_03710 PYKI01000470.1 Protein Homology CDS 87 692 . + 0 ID=cds-TGE19603.1;Parent=gene-C9F07_03710;Dbxref=NCBI_GP:TGE19603.1;Name=TGE19603.1;gbkey=CDS;gene=cysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457322.1;locus_tag=C9F07_03710;product=adenylyl-sulfate kinase;protein_id=TGE19603.1;transl_table=11 PYKI01000470.1 Genbank gene 710 1066 . + . ID=gene-C9F07_03715;Name=C9F07_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03715 PYKI01000470.1 Protein Homology CDS 710 1066 . + 0 ID=cds-TGE19604.1;Parent=gene-C9F07_03715;Dbxref=NCBI_GP:TGE19604.1;Name=TGE19604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457321.1;locus_tag=C9F07_03715;product=hypothetical protein;protein_id=TGE19604.1;transl_table=11 PYKI01000470.1 Genbank gene 1257 1568 . + . ID=gene-C9F07_03720;Name=C9F07_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03720 PYKI01000470.1 Protein Homology CDS 1257 1568 . + 0 ID=cds-TGE19605.1;Parent=gene-C9F07_03720;Dbxref=NCBI_GP:TGE19605.1;Name=TGE19605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457320.1;locus_tag=C9F07_03720;product=cell division protein FtsB;protein_id=TGE19605.1;transl_table=11 PYKI01000470.1 Genbank gene 1587 2297 . + . ID=gene-C9F07_03725;Name=C9F07_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03725 PYKI01000470.1 Protein Homology CDS 1587 2297 . + 0 ID=cds-TGE19606.1;Parent=gene-C9F07_03725;Dbxref=NCBI_GP:TGE19606.1;Name=TGE19606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457319.1;locus_tag=C9F07_03725;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=TGE19606.1;transl_table=11 PYKI01000470.1 Genbank gene 2297 2776 . + . ID=gene-C9F07_03730;Name=C9F07_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03730 PYKI01000470.1 Protein Homology CDS 2297 2776 . + 0 ID=cds-TGE19607.1;Parent=gene-C9F07_03730;Dbxref=NCBI_GP:TGE19607.1;Name=TGE19607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457318.1;locus_tag=C9F07_03730;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=TGE19607.1;transl_table=11 PYKI01000470.1 Genbank gene 2773 3822 . + . ID=gene-C9F07_03735;Name=C9F07_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03735 PYKI01000470.1 Protein Homology CDS 2773 3822 . + 0 ID=cds-TGE19608.1;Parent=gene-C9F07_03735;Dbxref=NCBI_GP:TGE19608.1;Name=TGE19608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=C9F07_03735;product=tRNA pseudouridine(13) synthase TruD;protein_id=TGE19608.1;transl_table=11 PYKI01000470.1 Genbank gene 3803 4564 . + . ID=gene-C9F07_03740;Name=C9F07_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03740 PYKI01000470.1 Protein Homology CDS 3803 4564 . + 0 ID=cds-TGE19609.1;Parent=gene-C9F07_03740;Dbxref=NCBI_GP:TGE19609.1;Name=TGE19609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457316.1;locus_tag=C9F07_03740;product=5'/3'-nucleotidase SurE;protein_id=TGE19609.1;transl_table=11 PYKI01000470.1 Genbank gene 4558 4880 . + . ID=gene-C9F07_03745;Name=pcm;end_range=4880,.;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=C9F07_03745;partial=true PYKI01000470.1 Protein Homology CDS 4558 4880 . + 0 ID=cds-TGE19610.1;Parent=gene-C9F07_03745;Dbxref=NCBI_GP:TGE19610.1;Name=TGE19610.1;Note=catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins;end_range=4880,.;gbkey=CDS;gene=pcm;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=C9F07_03745;partial=true;product=protein-L-isoaspartate O-methyltransferase;protein_id=TGE19610.1;transl_table=11 ##sequence-region PYKI01002286.1 1 2162 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002286.1 Genbank region 1 2162 . + . ID=PYKI01002286.1:1..2162;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002286.1 Genbank gene 1 1558 . - . ID=gene-C9F07_22410;Name=C9F07_22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22410;partial=true;start_range=.,1 PYKI01002286.1 Protein Homology CDS 1 1558 . - 0 ID=cds-TGD54833.1;Parent=gene-C9F07_22410;Dbxref=NCBI_GP:TGD54833.1;Name=TGD54833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=C9F07_22410;partial=true;product=TonB-dependent siderophore receptor;protein_id=TGD54833.1;start_range=.,1;transl_table=11 PYKI01002286.1 Genbank gene 1822 2162 . + . ID=gene-C9F07_22415;Name=C9F07_22415;end_range=2162,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22415;partial=true PYKI01002286.1 Protein Homology CDS 1822 2162 . + 0 ID=cds-TGD54834.1;Parent=gene-C9F07_22415;Dbxref=NCBI_GP:TGD54834.1;Name=TGD54834.1;end_range=2162,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455910.1;locus_tag=C9F07_22415;partial=true;product=hypothetical protein;protein_id=TGD54834.1;transl_table=11 ##sequence-region PYKI01001042.1 1 2161 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001042.1 Genbank region 1 2161 . + . ID=PYKI01001042.1:1..2161;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001042.1 Genbank pseudogene 24 704 . - . ID=gene-C9F07_09590;Name=C9F07_09590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09590;pseudo=true PYKI01001042.1 Protein Homology CDS 24 704 . - 0 ID=cds-C9F07_09590;Parent=gene-C9F07_09590;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458437.1;locus_tag=C9F07_09590;product=phosphoribulokinase;pseudo=true;transl_table=11 PYKI01001042.1 Genbank gene 756 974 . - . ID=gene-C9F07_09595;Name=C9F07_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09595 PYKI01001042.1 Protein Homology CDS 756 974 . - 0 ID=cds-TGD96699.1;Parent=gene-C9F07_09595;Dbxref=NCBI_GP:TGD96699.1;Name=TGD96699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458438.1;locus_tag=C9F07_09595;product=hypothetical protein;protein_id=TGD96699.1;transl_table=11 PYKI01001042.1 Genbank gene 971 2038 . - . ID=gene-C9F07_09600;Name=C9F07_09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09600 PYKI01001042.1 Protein Homology CDS 971 2038 . - 0 ID=cds-TGD96700.1;Parent=gene-C9F07_09600;Dbxref=NCBI_GP:TGD96700.1;Name=TGD96700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=C9F07_09600;product=hydrolase;protein_id=TGD96700.1;transl_table=11 ##sequence-region PYKI01001446.1 1 2161 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001446.1 Genbank region 1 2161 . + . ID=PYKI01001446.1:1..2161;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001446.1 Genbank gene 1 849 . + . ID=gene-C9F07_13700;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=C9F07_13700;partial=true;start_range=.,1 PYKI01001446.1 Protein Homology CDS 1 849 . + 0 ID=cds-TGD83678.1;Parent=gene-C9F07_13700;Dbxref=NCBI_GP:TGD83678.1;Name=TGD83678.1;gbkey=CDS;gene=radA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458987.1;locus_tag=C9F07_13700;partial=true;product=DNA repair protein RadA;protein_id=TGD83678.1;start_range=.,1;transl_table=11 PYKI01001446.1 Genbank gene 1000 2161 . + . ID=gene-C9F07_13705;Name=C9F07_13705;end_range=2161,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13705;partial=true PYKI01001446.1 Protein Homology CDS 1000 2161 . + 0 ID=cds-TGD83679.1;Parent=gene-C9F07_13705;Dbxref=NCBI_GP:TGD83679.1;Name=TGD83679.1;Note=catalyzes the formation of NAD(+) from nicotinamide ribonucleotide%3B catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside%3B also has a regulatory function;end_range=2161,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=C9F07_13705;partial=true;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=TGD83679.1;transl_table=11 ##sequence-region PYKI01000726.1 1 2157 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000726.1 Genbank region 1 2157 . + . ID=PYKI01000726.1:1..2157;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000726.1 Genbank gene 112 1014 . - . ID=gene-C9F07_06375;Name=C9F07_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06375 PYKI01000726.1 Protein Homology CDS 112 1014 . - 0 ID=cds-TGE11042.1;Parent=gene-C9F07_06375;Dbxref=NCBI_GP:TGE11042.1;Name=TGE11042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458312.1;locus_tag=C9F07_06375;product=LysR family transcriptional regulator;protein_id=TGE11042.1;transl_table=11 PYKI01000726.1 Genbank gene 1644 2157 . + . ID=gene-C9F07_06380;Name=C9F07_06380;end_range=2157,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06380;partial=true PYKI01000726.1 Protein Homology CDS 1644 2157 . + 0 ID=cds-TGE11043.1;Parent=gene-C9F07_06380;Dbxref=NCBI_GP:TGE11043.1;Name=TGE11043.1;end_range=2157,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=C9F07_06380;partial=true;product=helix-turn-helix transcriptional regulator;protein_id=TGE11043.1;transl_table=11 ##sequence-region PYKI01001618.1 1 2154 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001618.1 Genbank region 1 2154 . + . ID=PYKI01001618.1:1..2154;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001618.1 Genbank gene 112 441 . - . ID=gene-C9F07_15425;Name=C9F07_15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15425 PYKI01001618.1 Protein Homology CDS 112 441 . - 0 ID=cds-TGD70720.1;Parent=gene-C9F07_15425;Dbxref=NCBI_GP:TGD70720.1;Name=TGD70720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459553.1;locus_tag=C9F07_15425;product=GHKL domain-containing protein;protein_id=TGD70720.1;transl_table=11 PYKI01001618.1 Genbank gene 565 756 . + . ID=gene-C9F07_15430;Name=C9F07_15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15430 PYKI01001618.1 Protein Homology CDS 565 756 . + 0 ID=cds-TGD70718.1;Parent=gene-C9F07_15430;Dbxref=NCBI_GP:TGD70718.1;Name=TGD70718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447013.1;locus_tag=C9F07_15430;product=AcrB/AcrD/AcrF family protein;protein_id=TGD70718.1;transl_table=11 PYKI01001618.1 Genbank pseudogene 807 1661 . - . ID=gene-C9F07_15435;Name=C9F07_15435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15435;pseudo=true PYKI01001618.1 Protein Homology CDS 807 1661 . - 0 ID=cds-C9F07_15435;Parent=gene-C9F07_15435;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455146.1;locus_tag=C9F07_15435;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 PYKI01001618.1 Genbank gene 1877 2154 . + . ID=gene-C9F07_15440;Name=C9F07_15440;end_range=2154,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15440;partial=true PYKI01001618.1 Protein Homology CDS 1877 2154 . + 0 ID=cds-TGD70719.1;Parent=gene-C9F07_15440;Dbxref=NCBI_GP:TGD70719.1;Name=TGD70719.1;Note=Involved in disulfide oxidoreductase activity and electron transport;end_range=2154,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=C9F07_15440;partial=true;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=TGD70719.1;transl_table=11 ##sequence-region PYKI01002065.1 1 2150 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002065.1 Genbank region 1 2150 . + . ID=PYKI01002065.1:1..2150;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002065.1 Genbank pseudogene 15 1058 . - . ID=gene-C9F07_19990;Name=C9F07_19990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19990;pseudo=true PYKI01002065.1 Protein Homology CDS 15 1058 . - 0 ID=cds-C9F07_19990;Parent=gene-C9F07_19990;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=C9F07_19990;product=malto-oligosyltrehalose trehalohydrolase;pseudo=true;transl_table=11 PYKI01002065.1 Genbank gene 1187 1972 . - . ID=gene-C9F07_19995;Name=C9F07_19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19995 PYKI01002065.1 Protein Homology CDS 1187 1972 . - 0 ID=cds-TGD59351.1;Parent=gene-C9F07_19995;Dbxref=NCBI_GP:TGD59351.1;Name=TGD59351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455931.1;locus_tag=C9F07_19995;product=DUF1264 domain-containing protein;protein_id=TGD59351.1;transl_table=11 ##sequence-region PYKI01002387.1 1 2149 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002387.1 Genbank region 1 2149 . + . ID=PYKI01002387.1:1..2149;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002387.1 Genbank gene 1 1237 . - . ID=gene-C9F07_23495;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=C9F07_23495;partial=true;start_range=.,1 PYKI01002387.1 Protein Homology CDS 1 1237 . - 0 ID=cds-TGD52276.1;Parent=gene-C9F07_23495;Dbxref=NCBI_GP:TGD52276.1;Name=TGD52276.1;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=C9F07_23495;partial=true;product=lysine--tRNA ligase;protein_id=TGD52276.1;start_range=.,1;transl_table=11 PYKI01002387.1 Genbank gene 1247 2149 . - . ID=gene-C9F07_23500;Name=prfB;end_range=2149,.;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=C9F07_23500;partial=true PYKI01002387.1 Protein Homology CDS 1247 2149 . - 0 ID=cds-TGD52277.1;Parent=gene-C9F07_23500;Dbxref=NCBI_GP:TGD52277.1;Name=TGD52277.1;end_range=2149,.;gbkey=CDS;gene=prfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457439.1;locus_tag=C9F07_23500;partial=true;product=peptide chain release factor 2;protein_id=TGD52277.1;transl_table=11 ##sequence-region PYKI01000664.1 1 4871 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000664.1 Genbank region 1 4871 . + . ID=PYKI01000664.1:1..4871;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000664.1 Genbank gene 1 347 . - . ID=gene-C9F07_05780;Name=C9F07_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05780;partial=true;start_range=.,1 PYKI01000664.1 Protein Homology CDS 1 347 . - 0 ID=cds-TGE11907.1;Parent=gene-C9F07_05780;Dbxref=NCBI_GP:TGE11907.1;Name=TGE11907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455219.1;locus_tag=C9F07_05780;partial=true;product=alpha-ribazole phosphatase;protein_id=TGE11907.1;start_range=.,1;transl_table=11 PYKI01000664.1 Genbank gene 444 1538 . + . ID=gene-C9F07_05785;Name=C9F07_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05785 PYKI01000664.1 Protein Homology CDS 444 1538 . + 0 ID=cds-TGE11903.1;Parent=gene-C9F07_05785;Dbxref=NCBI_GP:TGE11903.1;Name=TGE11903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455220.1;locus_tag=C9F07_05785;product=threonine-phosphate decarboxylase;protein_id=TGE11903.1;transl_table=11 PYKI01000664.1 Genbank gene 1513 2154 . - . ID=gene-C9F07_05790;Name=C9F07_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05790 PYKI01000664.1 Protein Homology CDS 1513 2154 . - 0 ID=cds-TGE11908.1;Parent=gene-C9F07_05790;Dbxref=NCBI_GP:TGE11908.1;Name=TGE11908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=C9F07_05790;product=nicotinate-nicotinamide nucleotide adenylyltransferase;protein_id=TGE11908.1;transl_table=11 PYKI01000664.1 Genbank gene 2156 3187 . - . ID=gene-C9F07_05795;Name=C9F07_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05795 PYKI01000664.1 Protein Homology CDS 2156 3187 . - 0 ID=cds-TGE11904.1;Parent=gene-C9F07_05795;Dbxref=NCBI_GP:TGE11904.1;Name=TGE11904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455222.1;locus_tag=C9F07_05795;product=DNA polymerase III subunit delta;protein_id=TGE11904.1;transl_table=11 PYKI01000664.1 Genbank gene 3187 3777 . - . ID=gene-C9F07_05800;Name=C9F07_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05800 PYKI01000664.1 Protein Homology CDS 3187 3777 . - 0 ID=cds-TGE11905.1;Parent=gene-C9F07_05800;Dbxref=NCBI_GP:TGE11905.1;Name=TGE11905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455223.1;locus_tag=C9F07_05800;product=LPS assembly lipoprotein LptE;protein_id=TGE11905.1;transl_table=11 PYKI01000664.1 Genbank gene 3792 4841 . - . ID=gene-C9F07_05805;Name=C9F07_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05805 PYKI01000664.1 Protein Homology CDS 3792 4841 . - 0 ID=cds-TGE11906.1;Parent=gene-C9F07_05805;Dbxref=NCBI_GP:TGE11906.1;Name=TGE11906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001678937.1;locus_tag=C9F07_05805;product=leucyl-tRNA synthetase;protein_id=TGE11906.1;transl_table=11 ##sequence-region PYKI01000551.1 1 2147 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000551.1 Genbank region 1 2147 . + . ID=PYKI01000551.1:1..2147;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000551.1 Genbank gene 1 700 . + . ID=gene-C9F07_04605;Name=C9F07_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04605;partial=true;start_range=.,1 PYKI01000551.1 Protein Homology CDS 1 700 . + 1 ID=cds-TGE15131.1;Parent=gene-C9F07_04605;Dbxref=NCBI_GP:TGE15131.1;Name=TGE15131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=C9F07_04605;partial=true;product=triose-phosphate isomerase;protein_id=TGE15131.1;start_range=.,1;transl_table=11 PYKI01000551.1 Genbank gene 792 1556 . - . ID=gene-C9F07_04610;Name=C9F07_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04610 PYKI01000551.1 Protein Homology CDS 792 1556 . - 0 ID=cds-TGE15132.1;Parent=gene-C9F07_04610;Dbxref=NCBI_GP:TGE15132.1;Name=TGE15132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=C9F07_04610;product=epimerase;protein_id=TGE15132.1;transl_table=11 PYKI01000551.1 Genbank gene 1566 1895 . - . ID=gene-C9F07_04615;Name=C9F07_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04615 PYKI01000551.1 Protein Homology CDS 1566 1895 . - 0 ID=cds-TGE15133.1;Parent=gene-C9F07_04615;Dbxref=NCBI_GP:TGE15133.1;Name=TGE15133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457973.1;locus_tag=C9F07_04615;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=TGE15133.1;transl_table=11 PYKI01000551.1 Genbank pseudogene 1939 2100 . - . ID=gene-C9F07_04620;Name=C9F07_04620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04620;pseudo=true PYKI01000551.1 Protein Homology CDS 1939 2100 . - 0 ID=cds-C9F07_04620;Parent=gene-C9F07_04620;Note=involved in autoinducer 2 transport and processing%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457974.1;locus_tag=C9F07_04620;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase LsrF;pseudo=true;transl_table=11 ##sequence-region PYKI01003511.1 1 2144 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003511.1 Genbank region 1 2144 . + . ID=PYKI01003511.1:1..2144;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003511.1 Genbank gene 1 168 . + . ID=gene-C9F07_35405;Name=C9F07_35405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35405;partial=true;start_range=.,1 PYKI01003511.1 Protein Homology CDS 1 168 . + 0 ID=cds-TGD31721.1;Parent=gene-C9F07_35405;Dbxref=NCBI_GP:TGD31721.1;Name=TGD31721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457815.1;locus_tag=C9F07_35405;partial=true;product=uroporphyrinogen-III C-methyltransferase;protein_id=TGD31721.1;start_range=.,1;transl_table=11 PYKI01003511.1 Genbank pseudogene 171 1364 . + . ID=gene-C9F07_35410;Name=C9F07_35410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35410;pseudo=true PYKI01003511.1 Protein Homology CDS 171 1364 . + 0 ID=cds-C9F07_35410;Parent=gene-C9F07_35410;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=C9F07_35410;product=protoheme IX biogenesis protein HemY;pseudo=true;transl_table=11 PYKI01003511.1 Genbank gene 1949 2025 . - . ID=gene-C9F07_35415;Name=C9F07_35415;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_35415 PYKI01003511.1 tRNAscan-SE tRNA 1949 2025 . - . ID=rna-C9F07_35415;Parent=gene-C9F07_35415;anticodon=(pos:complement(1989..1991));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_35415;product=tRNA-Pro PYKI01003511.1 tRNAscan-SE exon 1949 2025 . - . ID=exon-C9F07_35415-1;Parent=rna-C9F07_35415;anticodon=(pos:complement(1989..1991));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_35415;product=tRNA-Pro ##sequence-region PYKI01001038.1 1 2141 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001038.1 Genbank region 1 2141 . + . ID=PYKI01001038.1:1..2141;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001038.1 Genbank gene 1 1055 . + . ID=gene-C9F07_09560;Name=C9F07_09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09560;partial=true;start_range=.,1 PYKI01001038.1 Protein Homology CDS 1 1055 . + 2 ID=cds-TGD96855.1;Parent=gene-C9F07_09560;Dbxref=NCBI_GP:TGD96855.1;Name=TGD96855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457191.1;locus_tag=C9F07_09560;partial=true;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=TGD96855.1;start_range=.,1;transl_table=11 PYKI01001038.1 Genbank gene 1186 2141 . + . ID=gene-C9F07_09565;Name=C9F07_09565;end_range=2141,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09565;partial=true PYKI01001038.1 Protein Homology CDS 1186 2141 . + 0 ID=cds-TGD96856.1;Parent=gene-C9F07_09565;Dbxref=NCBI_GP:TGD96856.1;Name=TGD96856.1;end_range=2141,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=C9F07_09565;partial=true;product=GABA permease;protein_id=TGD96856.1;transl_table=11 ##sequence-region PYKI01000535.1 1 2132 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000535.1 Genbank region 1 2132 . + . ID=PYKI01000535.1:1..2132;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000535.1 Genbank gene 1 294 . - . ID=gene-C9F07_04440;Name=C9F07_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04440;partial=true;start_range=.,1 PYKI01000535.1 Protein Homology CDS 1 294 . - 0 ID=cds-TGE15770.1;Parent=gene-C9F07_04440;Dbxref=NCBI_GP:TGE15770.1;Name=TGE15770.1;Note=Involved in ubiquinone biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=C9F07_04440;partial=true;product=bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase;protein_id=TGE15770.1;start_range=.,1;transl_table=11 PYKI01000535.1 Genbank gene 377 1261 . - . ID=gene-C9F07_04445;Name=C9F07_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04445 PYKI01000535.1 Protein Homology CDS 377 1261 . - 0 ID=cds-TGE15771.1;Parent=gene-C9F07_04445;Dbxref=NCBI_GP:TGE15771.1;Name=TGE15771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=C9F07_04445;product=GntR family transcriptional regulator;protein_id=TGE15771.1;transl_table=11 PYKI01000535.1 Genbank gene 1311 2132 . + . ID=gene-C9F07_04450;Name=C9F07_04450;end_range=2132,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04450;partial=true PYKI01000535.1 Protein Homology CDS 1311 2132 . + 0 ID=cds-TGE15772.1;Parent=gene-C9F07_04450;Dbxref=NCBI_GP:TGE15772.1;Name=TGE15772.1;end_range=2132,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=C9F07_04450;partial=true;product=MFS transporter;protein_id=TGE15772.1;transl_table=11 ##sequence-region PYKI01002929.1 1 2132 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002929.1 Genbank region 1 2132 . + . ID=PYKI01002929.1:1..2132;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002929.1 Genbank pseudogene 54 887 . - . ID=gene-C9F07_29345;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=pseudogene;locus_tag=C9F07_29345;pseudo=true PYKI01002929.1 Protein Homology CDS 54 887 . - 0 ID=cds-C9F07_29345;Parent=gene-C9F07_29345;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=aceA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=C9F07_29345;product=isocitrate lyase;pseudo=true;transl_table=11 PYKI01002929.1 Genbank gene 919 2132 . - . ID=gene-C9F07_29350;Name=aceB;end_range=2132,.;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=C9F07_29350;partial=true PYKI01002929.1 Protein Homology CDS 919 2132 . - 2 ID=cds-TGD42832.1;Parent=gene-C9F07_29350;Dbxref=NCBI_GP:TGD42832.1;Name=TGD42832.1;end_range=2132,.;gbkey=CDS;gene=aceB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458503.1;locus_tag=C9F07_29350;partial=true;product=malate synthase A;protein_id=TGD42832.1;transl_table=11 ##sequence-region PYKI01001584.1 1 2125 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001584.1 Genbank region 1 2125 . + . ID=PYKI01001584.1:1..2125;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001584.1 Genbank gene 1 1254 . + . ID=gene-C9F07_15145;Name=C9F07_15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15145;partial=true;start_range=.,1 PYKI01001584.1 Protein Homology CDS 1 1254 . + 0 ID=cds-TGD72401.1;Parent=gene-C9F07_15145;Dbxref=NCBI_GP:TGD72401.1;Name=TGD72401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=C9F07_15145;partial=true;product=phosphotransferase RcsD;protein_id=TGD72401.1;start_range=.,1;transl_table=11 PYKI01001584.1 Genbank gene 1271 1921 . + . ID=gene-C9F07_15150;Name=C9F07_15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15150 PYKI01001584.1 Protein Homology CDS 1271 1921 . + 0 ID=cds-TGD72402.1;Parent=gene-C9F07_15150;Dbxref=NCBI_GP:TGD72402.1;Name=TGD72402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=C9F07_15150;product=DNA-binding response regulator;protein_id=TGD72402.1;transl_table=11 ##sequence-region PYKI01000331.1 1 2124 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000331.1 Genbank region 1 2124 . + . ID=PYKI01000331.1:1..2124;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000331.1 Genbank gene 137 715 . - . ID=gene-C9F07_02380;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=C9F07_02380 PYKI01000331.1 Protein Homology CDS 137 715 . - 0 ID=cds-TGE26856.1;Parent=gene-C9F07_02380;Dbxref=NCBI_GP:TGE26856.1;Name=TGE26856.1;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;gbkey=CDS;gene=gmhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458774.1;locus_tag=C9F07_02380;product=phosphoheptose isomerase;protein_id=TGE26856.1;transl_table=11 PYKI01000331.1 Genbank gene 955 2124 . + . ID=gene-C9F07_02385;Name=fadE;end_range=2124,.;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=C9F07_02385;partial=true PYKI01000331.1 Protein Homology CDS 955 2124 . + 0 ID=cds-TGE26857.1;Parent=gene-C9F07_02385;Dbxref=NCBI_GP:TGE26857.1;Name=TGE26857.1;Note=functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA;end_range=2124,.;gbkey=CDS;gene=fadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=C9F07_02385;partial=true;product=acyl-CoA dehydrogenase;protein_id=TGE26857.1;transl_table=11 ##sequence-region PYKI01003195.1 1 4868 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003195.1 Genbank region 1 4868 . + . ID=PYKI01003195.1:1..4868;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003195.1 Genbank gene 98 934 . - . ID=gene-C9F07_32065;Name=C9F07_32065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32065 PYKI01003195.1 Protein Homology CDS 98 934 . - 0 ID=cds-TGD37405.1;Parent=gene-C9F07_32065;Dbxref=NCBI_GP:TGD37405.1;Name=TGD37405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457413.1;locus_tag=C9F07_32065;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=TGD37405.1;transl_table=11 PYKI01003195.1 Genbank gene 925 1095 . - . ID=gene-C9F07_32070;Name=C9F07_32070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32070 PYKI01003195.1 Protein Homology CDS 925 1095 . - 0 ID=cds-TGD37406.1;Parent=gene-C9F07_32070;Dbxref=NCBI_GP:TGD37406.1;Name=TGD37406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574930.1;locus_tag=C9F07_32070;product=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase;protein_id=TGD37406.1;transl_table=11 PYKI01003195.1 Genbank gene 1364 2542 . - . ID=gene-C9F07_32075;Name=C9F07_32075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32075 PYKI01003195.1 Protein Homology CDS 1364 2542 . - 0 ID=cds-TGD37407.1;Parent=gene-C9F07_32075;Dbxref=NCBI_GP:TGD37407.1;Name=TGD37407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457414.1;locus_tag=C9F07_32075;product=acetyl-CoA C-acyltransferase;protein_id=TGD37407.1;transl_table=11 PYKI01003195.1 Genbank gene 2665 3528 . - . ID=gene-C9F07_32080;Name=C9F07_32080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32080 PYKI01003195.1 Protein Homology CDS 2665 3528 . - 0 ID=cds-TGD37408.1;Parent=gene-C9F07_32080;Dbxref=NCBI_GP:TGD37408.1;Name=TGD37408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=C9F07_32080;product=LysR family transcriptional regulator;protein_id=TGD37408.1;transl_table=11 PYKI01003195.1 Genbank gene 3605 4087 . + . ID=gene-C9F07_32085;Name=C9F07_32085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32085 PYKI01003195.1 Protein Homology CDS 3605 4087 . + 0 ID=cds-TGD37409.1;Parent=gene-C9F07_32085;Dbxref=NCBI_GP:TGD37409.1;Name=TGD37409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457416.1;locus_tag=C9F07_32085;product=Na(+)-translocating NADH-quinone reductase subunit E;protein_id=TGD37409.1;transl_table=11 PYKI01003195.1 Genbank pseudogene 4229 4828 . + . ID=gene-C9F07_32090;Name=C9F07_32090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32090;pseudo=true PYKI01003195.1 Protein Homology CDS 4229 4828 . + 0 ID=cds-C9F07_32090;Parent=gene-C9F07_32090;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311729.1;locus_tag=C9F07_32090;product=transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01001591.1 1 2122 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001591.1 Genbank region 1 2122 . + . ID=PYKI01001591.1:1..2122;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001591.1 Genbank gene 1 707 . + . ID=gene-C9F07_15200;Name=C9F07_15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15200;partial=true;start_range=.,1 PYKI01001591.1 Protein Homology CDS 1 707 . + 2 ID=cds-TGD72039.1;Parent=gene-C9F07_15200;Dbxref=NCBI_GP:TGD72039.1;Name=TGD72039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406427.1;locus_tag=C9F07_15200;partial=true;product=isochorismate synthase MenF;protein_id=TGD72039.1;start_range=.,1;transl_table=11 PYKI01001591.1 Genbank pseudogene 793 2055 . + . ID=gene-C9F07_15205;Name=C9F07_15205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15205;pseudo=true PYKI01001591.1 Protein Homology CDS 793 2055 . + 0 ID=cds-C9F07_15205;Parent=gene-C9F07_15205;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456852.1;locus_tag=C9F07_15205;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;pseudo=true;transl_table=11 ##sequence-region PYKI01003355.1 1 2120 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003355.1 Genbank region 1 2120 . + . ID=PYKI01003355.1:1..2120;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003355.1 Genbank gene 1 96 . - . ID=gene-C9F07_33795;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=C9F07_33795;partial=true;start_range=.,1 PYKI01003355.1 Protein Homology CDS 1 96 . - 0 ID=cds-TGD35008.1;Parent=gene-C9F07_33795;Dbxref=NCBI_GP:TGD35008.1;Name=TGD35008.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309027.1;locus_tag=C9F07_33795;partial=true;product=protein YcaR;protein_id=TGD35008.1;start_range=.,1;transl_table=11 PYKI01003355.1 Genbank gene 148 1380 . - . ID=gene-C9F07_33800;Name=C9F07_33800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33800 PYKI01003355.1 Protein Homology CDS 148 1380 . - 0 ID=cds-TGD35009.1;Parent=gene-C9F07_33800;Dbxref=NCBI_GP:TGD35009.1;Name=TGD35009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000056538.1;locus_tag=C9F07_33800;product=winged helix-turn-helix domain-containing protein;protein_id=TGD35009.1;transl_table=11 PYKI01003355.1 Genbank gene 1424 2120 . - . ID=gene-C9F07_33805;Name=lpxK;end_range=2120,.;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=C9F07_33805;partial=true PYKI01003355.1 Protein Homology CDS 1424 2120 . - 1 ID=cds-TGD35010.1;Parent=gene-C9F07_33805;Dbxref=NCBI_GP:TGD35010.1;Name=TGD35010.1;end_range=2120,.;gbkey=CDS;gene=lpxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455472.1;locus_tag=C9F07_33805;partial=true;product=tetraacyldisaccharide 4'-kinase;protein_id=TGD35010.1;transl_table=11 ##sequence-region PYKI01000932.1 1 2116 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000932.1 Genbank region 1 2116 . + . ID=PYKI01000932.1:1..2116;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000932.1 Genbank gene 202 1518 . + . ID=gene-C9F07_08505;Name=C9F07_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08505 PYKI01000932.1 Protein Homology CDS 202 1518 . + 0 ID=cds-TGE02209.1;Parent=gene-C9F07_08505;Dbxref=NCBI_GP:TGE02209.1;Name=TGE02209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458362.1;locus_tag=C9F07_08505;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=TGE02209.1;transl_table=11 PYKI01000932.1 Genbank gene 1623 2116 . + . ID=gene-C9F07_08510;Name=C9F07_08510;end_range=2116,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08510;partial=true PYKI01000932.1 Protein Homology CDS 1623 2116 . + 0 ID=cds-TGE02210.1;Parent=gene-C9F07_08510;Dbxref=NCBI_GP:TGE02210.1;Name=TGE02210.1;Note=with UgpEC is involved in the uptake of glycerol-3-phosphate;end_range=2116,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=C9F07_08510;partial=true;product=glycerol-3-phosphate transporter permease;protein_id=TGE02210.1;transl_table=11 ##sequence-region PYKI01003096.1 1 2115 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003096.1 Genbank region 1 2115 . + . ID=PYKI01003096.1:1..2115;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003096.1 Genbank pseudogene 58 180 . + . ID=gene-C9F07_30965;Name=C9F07_30965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30965;pseudo=true PYKI01003096.1 Protein Homology CDS 58 180 . + 0 ID=cds-C9F07_30965;Parent=gene-C9F07_30965;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455638.1;locus_tag=C9F07_30965;product=major curlin subunit CsgA;pseudo=true;transl_table=11 PYKI01003096.1 Genbank gene 242 568 . + . ID=gene-C9F07_30970;Name=C9F07_30970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30970 PYKI01003096.1 Protein Homology CDS 242 568 . + 0 ID=cds-TGD40056.1;Parent=gene-C9F07_30970;Dbxref=NCBI_GP:TGD40056.1;Name=TGD40056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=C9F07_30970;product=curli assembly protein CsgC;protein_id=TGD40056.1;transl_table=11 PYKI01003096.1 Genbank gene 699 1019 . + . ID=gene-C9F07_30975;Name=C9F07_30975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30975 PYKI01003096.1 Protein Homology CDS 699 1019 . + 0 ID=cds-TGD40057.1;Parent=gene-C9F07_30975;Dbxref=NCBI_GP:TGD40057.1;Name=TGD40057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455640.1;locus_tag=C9F07_30975;product=type 1 fimbrial protein;protein_id=TGD40057.1;transl_table=11 PYKI01003096.1 Genbank gene 1106 1645 . + . ID=gene-C9F07_30980;Name=C9F07_30980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30980 PYKI01003096.1 Protein Homology CDS 1106 1645 . + 0 ID=cds-TGD40058.1;Parent=gene-C9F07_30980;Dbxref=NCBI_GP:TGD40058.1;Name=TGD40058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=C9F07_30980;product=O-acetyl-ADP-ribose deacetylase;protein_id=TGD40058.1;transl_table=11 PYKI01003096.1 Genbank pseudogene 1581 2099 . + . ID=gene-C9F07_30985;Name=C9F07_30985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30985;pseudo=true PYKI01003096.1 Protein Homology CDS 1581 2099 . + 0 ID=cds-C9F07_30985;Parent=gene-C9F07_30985;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455642.1;locus_tag=C9F07_30985;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002019.1 1 2115 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002019.1 Genbank region 1 2115 . + . ID=PYKI01002019.1:1..2115;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002019.1 Genbank gene 1 849 . - . ID=gene-C9F07_19470;Name=C9F07_19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19470;partial=true;start_range=.,1 PYKI01002019.1 Protein Homology CDS 1 849 . - 0 ID=cds-TGD60078.1;Parent=gene-C9F07_19470;Dbxref=NCBI_GP:TGD60078.1;Name=TGD60078.1;Note=binds the septal ring;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=C9F07_19470;partial=true;product=cell division protein DamX;protein_id=TGD60078.1;start_range=.,1;transl_table=11 PYKI01002019.1 Genbank gene 947 2035 . - . ID=gene-C9F07_19475;Name=C9F07_19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19475 PYKI01002019.1 Protein Homology CDS 947 2035 . - 0 ID=cds-TGD60079.1;Parent=gene-C9F07_19475;Dbxref=NCBI_GP:TGD60079.1;Name=TGD60079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458418.1;locus_tag=C9F07_19475;product=3-dehydroquinate synthase;protein_id=TGD60079.1;transl_table=11 ##sequence-region PYKI01002974.1 1 2115 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002974.1 Genbank region 1 2115 . + . ID=PYKI01002974.1:1..2115;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002974.1 Genbank gene 57 1274 . - . ID=gene-C9F07_29815;Name=C9F07_29815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29815 PYKI01002974.1 Protein Homology CDS 57 1274 . - 0 ID=cds-TGD41596.1;Parent=gene-C9F07_29815;Dbxref=NCBI_GP:TGD41596.1;Name=TGD41596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000005722.1;locus_tag=C9F07_29815;product=phage major capsid protein;protein_id=TGD41596.1;transl_table=11 PYKI01002974.1 Genbank gene 1284 2115 . - . ID=gene-C9F07_29820;Name=C9F07_29820;end_range=2115,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29820;partial=true PYKI01002974.1 Protein Homology CDS 1284 2115 . - 1 ID=cds-TGD41597.1;Parent=gene-C9F07_29820;Dbxref=NCBI_GP:TGD41597.1;Name=TGD41597.1;end_range=2115,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077000.1;locus_tag=C9F07_29820;partial=true;product=peptidase S14;protein_id=TGD41597.1;transl_table=11 ##sequence-region PYKI01002497.1 1 2109 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002497.1 Genbank region 1 2109 . + . ID=PYKI01002497.1:1..2109;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002497.1 Genbank gene 1 1507 . + . ID=gene-C9F07_24700;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=C9F07_24700;partial=true;start_range=.,1 PYKI01002497.1 Protein Homology CDS 1 1507 . + 1 ID=cds-TGD50312.1;Parent=gene-C9F07_24700;Dbxref=NCBI_GP:TGD50312.1;Name=TGD50312.1;gbkey=CDS;gene=hypF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457236.1;locus_tag=C9F07_24700;partial=true;product=carbamoyltransferase HypF;protein_id=TGD50312.1;start_range=.,1;transl_table=11 PYKI01002497.1 Genbank gene 1604 2109 . - . ID=gene-C9F07_24705;Name=C9F07_24705;end_range=2109,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24705;partial=true PYKI01002497.1 Protein Homology CDS 1604 2109 . - 2 ID=cds-TGD50313.1;Parent=gene-C9F07_24705;Dbxref=NCBI_GP:TGD50313.1;Name=TGD50313.1;end_range=2109,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457235.1;locus_tag=C9F07_24705;partial=true;product=FAD-dependent oxidoreductase;protein_id=TGD50313.1;transl_table=11 ##sequence-region PYKI01002205.1 1 2108 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002205.1 Genbank region 1 2108 . + . ID=PYKI01002205.1:1..2108;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002205.1 Genbank gene 52 315 . - . ID=gene-C9F07_21450;Name=C9F07_21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21450 PYKI01002205.1 Protein Homology CDS 52 315 . - 0 ID=cds-TGD56517.1;Parent=gene-C9F07_21450;Dbxref=NCBI_GP:TGD56517.1;Name=TGD56517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000621258.1;locus_tag=C9F07_21450;product=hypothetical protein;protein_id=TGD56517.1;transl_table=11 PYKI01002205.1 Genbank gene 479 1192 . - . ID=gene-C9F07_21455;Name=C9F07_21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21455 PYKI01002205.1 Protein Homology CDS 479 1192 . - 0 ID=cds-TGD56518.1;Parent=gene-C9F07_21455;Dbxref=NCBI_GP:TGD56518.1;Name=TGD56518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458360.1;locus_tag=C9F07_21455;product=ABC transporter ATP-binding protein;protein_id=TGD56518.1;transl_table=11 PYKI01002205.1 Genbank gene 1194 1961 . - . ID=gene-C9F07_21460;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=C9F07_21460 PYKI01002205.1 Protein Homology CDS 1194 1961 . - 0 ID=cds-TGD56519.1;Parent=gene-C9F07_21460;Dbxref=NCBI_GP:TGD56519.1;Name=TGD56519.1;Note=Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=C9F07_21460;product=ABC transporter ATP-binding protein;protein_id=TGD56519.1;transl_table=11 PYKI01002205.1 Genbank gene 1958 2101 . - . ID=gene-C9F07_21465;Name=C9F07_21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21465 PYKI01002205.1 Protein Homology CDS 1958 2101 . - 0 ID=cds-TGD56520.1;Parent=gene-C9F07_21465;Dbxref=NCBI_GP:TGD56520.1;Name=TGD56520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235331.1;locus_tag=C9F07_21465;product=branched-chain amino acid ABC transporter permease;protein_id=TGD56520.1;transl_table=11 ##sequence-region PYKI01001779.1 1 2106 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001779.1 Genbank region 1 2106 . + . ID=PYKI01001779.1:1..2106;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001779.1 Genbank gene 32 1201 . + . ID=gene-C9F07_17075;Name=C9F07_17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17075 PYKI01001779.1 Protein Homology CDS 32 1201 . + 0 ID=cds-TGD66831.1;Parent=gene-C9F07_17075;Dbxref=NCBI_GP:TGD66831.1;Name=TGD66831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001494145.1;locus_tag=C9F07_17075;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=TGD66831.1;transl_table=11 PYKI01001779.1 Genbank gene 1230 2106 . + . ID=gene-C9F07_17080;Name=C9F07_17080;end_range=2106,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17080;partial=true PYKI01001779.1 Protein Homology CDS 1230 2106 . + 0 ID=cds-TGD66832.1;Parent=gene-C9F07_17080;Dbxref=NCBI_GP:TGD66832.1;Name=TGD66832.1;end_range=2106,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455712.1;locus_tag=C9F07_17080;partial=true;product=N-acetylglucosamine kinase;protein_id=TGD66832.1;transl_table=11 ##sequence-region PYKI01001021.1 1 4849 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001021.1 Genbank region 1 4849 . + . ID=PYKI01001021.1:1..4849;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001021.1 Genbank gene 1 274 . + . ID=gene-C9F07_09380;Name=C9F07_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09380;partial=true;start_range=.,1 PYKI01001021.1 Protein Homology CDS 1 274 . + 1 ID=cds-TGD97521.1;Parent=gene-C9F07_09380;Dbxref=NCBI_GP:TGD97521.1;Name=TGD97521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454919.1;locus_tag=C9F07_09380;partial=true;product=hypothetical protein;protein_id=TGD97521.1;start_range=.,1;transl_table=11 PYKI01001021.1 Genbank gene 605 1324 . + . ID=gene-C9F07_09385;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=C9F07_09385 PYKI01001021.1 Protein Homology CDS 605 1324 . + 0 ID=cds-TGD97522.1;Parent=gene-C9F07_09385;Dbxref=NCBI_GP:TGD97522.1;Name=TGD97522.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=C9F07_09385;product=adhesin/invasin protein PagN;protein_id=TGD97522.1;transl_table=11 PYKI01001021.1 Genbank gene 1328 1516 . - . ID=gene-C9F07_09390;Name=C9F07_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09390 PYKI01001021.1 Protein Homology CDS 1328 1516 . - 0 ID=cds-TGD97523.1;Parent=gene-C9F07_09390;Dbxref=NCBI_GP:TGD97523.1;Name=TGD97523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=C9F07_09390;product=hypothetical protein;protein_id=TGD97523.1;transl_table=11 PYKI01001021.1 Genbank gene 1629 1823 . + . ID=gene-C9F07_09395;Name=C9F07_09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09395 PYKI01001021.1 Protein Homology CDS 1629 1823 . + 0 ID=cds-TGD97526.1;Parent=gene-C9F07_09395;Dbxref=NCBI_GP:TGD97526.1;Name=TGD97526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012532524.1;locus_tag=C9F07_09395;product=hypothetical protein;protein_id=TGD97526.1;transl_table=11 PYKI01001021.1 Genbank gene 2287 2904 . - . ID=gene-C9F07_09400;Name=C9F07_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09400 PYKI01001021.1 Protein Homology CDS 2287 2904 . - 0 ID=cds-TGD97524.1;Parent=gene-C9F07_09400;Dbxref=NCBI_GP:TGD97524.1;Name=TGD97524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539141.1;locus_tag=C9F07_09400;product=TioA protein;protein_id=TGD97524.1;transl_table=11 PYKI01001021.1 Genbank gene 3044 3499 . - . ID=gene-C9F07_09405;Name=C9F07_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09405 PYKI01001021.1 Protein Homology CDS 3044 3499 . - 0 ID=cds-TGD97525.1;Parent=gene-C9F07_09405;Dbxref=NCBI_GP:TGD97525.1;Name=TGD97525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454916.1;locus_tag=C9F07_09405;product=Lrp/AsnC family transcriptional regulator;protein_id=TGD97525.1;transl_table=11 PYKI01001021.1 Genbank gene 3632 4711 . - . ID=gene-C9F07_09410;Name=C9F07_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09410 PYKI01001021.1 Protein Homology CDS 3632 4711 . - 0 ID=cds-TGD97527.1;Parent=gene-C9F07_09410;Dbxref=NCBI_GP:TGD97527.1;Name=TGD97527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454915.1;locus_tag=C9F07_09410;product=fimbrial protein TcfD;protein_id=TGD97527.1;transl_table=11 ##sequence-region PYKI01003060.1 1 2102 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003060.1 Genbank region 1 2102 . + . ID=PYKI01003060.1:1..2102;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003060.1 Genbank pseudogene 53 160 . + . ID=gene-C9F07_30685;Name=C9F07_30685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30685;pseudo=true PYKI01003060.1 Protein Homology CDS 53 160 . + 0 ID=cds-C9F07_30685;Parent=gene-C9F07_30685;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800787.1;locus_tag=C9F07_30685;product=shikimate 5-dehydrogenase;pseudo=true;transl_table=11 PYKI01003060.1 Genbank gene 209 1582 . + . ID=gene-C9F07_30690;Name=C9F07_30690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30690 PYKI01003060.1 Protein Homology CDS 209 1582 . + 0 ID=cds-TGD40967.1;Parent=gene-C9F07_30690;Dbxref=NCBI_GP:TGD40967.1;Name=TGD40967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=C9F07_30690;product=PTS fructose transporter subunit IIBC;protein_id=TGD40967.1;transl_table=11 PYKI01003060.1 Genbank gene 1749 2102 . + . ID=gene-C9F07_30695;Name=C9F07_30695;end_range=2102,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30695;partial=true PYKI01003060.1 Protein Homology CDS 1749 2102 . + 0 ID=cds-TGD40968.1;Parent=gene-C9F07_30695;Dbxref=NCBI_GP:TGD40968.1;Name=TGD40968.1;end_range=2102,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000867129.1;locus_tag=C9F07_30695;partial=true;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=TGD40968.1;transl_table=11 ##sequence-region PYKI01000417.1 1 2100 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000417.1 Genbank region 1 2100 . + . ID=PYKI01000417.1:1..2100;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000417.1 Genbank gene 1 1205 . + . ID=gene-C9F07_03210;Name=C9F07_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03210;partial=true;start_range=.,1 PYKI01000417.1 Protein Homology CDS 1 1205 . + 2 ID=cds-TGE20933.1;Parent=gene-C9F07_03210;Dbxref=NCBI_GP:TGE20933.1;Name=TGE20933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=C9F07_03210;partial=true;product=phosphate acetyltransferase;protein_id=TGE20933.1;start_range=.,1;transl_table=11 PYKI01000417.1 Genbank gene 1423 2100 . + . ID=gene-C9F07_03215;Name=C9F07_03215;end_range=2100,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03215;partial=true PYKI01000417.1 Protein Homology CDS 1423 2100 . + 0 ID=cds-TGE20934.1;Parent=gene-C9F07_03215;Dbxref=NCBI_GP:TGE20934.1;Name=TGE20934.1;end_range=2100,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456881.1;locus_tag=C9F07_03215;partial=true;product=putative basic amino acid antiporter YfcC;protein_id=TGE20934.1;transl_table=11 ##sequence-region PYKI01001559.1 1 2099 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001559.1 Genbank region 1 2099 . + . ID=PYKI01001559.1:1..2099;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001559.1 Genbank gene 58 948 . - . ID=gene-C9F07_14935;Name=C9F07_14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14935 PYKI01001559.1 Protein Homology CDS 58 948 . - 0 ID=cds-TGD73855.1;Parent=gene-C9F07_14935;Dbxref=NCBI_GP:TGD73855.1;Name=TGD73855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457632.1;locus_tag=C9F07_14935;product=transcriptional regulator TdcA;protein_id=TGD73855.1;transl_table=11 PYKI01001559.1 Genbank pseudogene 1203 1454 . + . ID=gene-C9F07_14940;Name=C9F07_14940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14940;pseudo=true PYKI01001559.1 Protein Homology CDS 1203 1454 . + 0 ID=cds-C9F07_14940;Parent=gene-C9F07_14940;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000858706.1;locus_tag=C9F07_14940;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001559.1 Genbank gene 1779 2099 . - . ID=gene-C9F07_14945;Name=rnpB;end_range=2099,.;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=C9F07_14945;partial=true PYKI01001559.1 cmsearch RNase_P_RNA 1779 2099 . - . ID=rna-C9F07_14945;Parent=gene-C9F07_14945;Dbxref=RFAM:RF00010;end_range=2099,.;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00010,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_14945;partial=true;product=RNase P RNA component class A PYKI01001559.1 cmsearch exon 1779 2099 . - . ID=exon-C9F07_14945-1;Parent=rna-C9F07_14945;Dbxref=RFAM:RF00010;end_range=2099,.;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00010,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_14945;partial=true;product=RNase P RNA component class A ##sequence-region PYKI01001594.1 1 2097 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001594.1 Genbank region 1 2097 . + . ID=PYKI01001594.1:1..2097;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001594.1 Genbank gene 105 545 . - . ID=gene-C9F07_15230;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=C9F07_15230 PYKI01001594.1 Protein Homology CDS 105 545 . - 0 ID=cds-TGD71697.1;Parent=gene-C9F07_15230;Dbxref=NCBI_GP:TGD71697.1;Name=TGD71697.1;gbkey=CDS;gene=hpaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=C9F07_15230;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=TGD71697.1;transl_table=11 PYKI01001594.1 Genbank gene 820 2097 . + . ID=gene-C9F07_15235;Name=C9F07_15235;end_range=2097,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15235;partial=true PYKI01001594.1 Protein Homology CDS 820 2097 . + 0 ID=cds-TGD71698.1;Parent=gene-C9F07_15235;Dbxref=NCBI_GP:TGD71698.1;Name=TGD71698.1;end_range=2097,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455598.1;locus_tag=C9F07_15235;partial=true;product=4-hydroxyphenylacetate degradation protein;protein_id=TGD71698.1;transl_table=11 ##sequence-region PYKI01003530.1 1 2094 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003530.1 Genbank region 1 2094 . + . ID=PYKI01003530.1:1..2094;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003530.1 Genbank gene 1 389 . + . ID=gene-C9F07_35635;Name=C9F07_35635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35635;partial=true;start_range=.,1 PYKI01003530.1 Protein Homology CDS 1 389 . + 2 ID=cds-TGD31352.1;Parent=gene-C9F07_35635;Dbxref=NCBI_GP:TGD31352.1;Name=TGD31352.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B transduces proton motive force of the cytoplasmic membrane to outer membrane transporters%3B involved in the transport of ron-siderophore complexes%2C vitamin B12 and colicins;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=C9F07_35635;partial=true;product=TonB system transport protein TonB;protein_id=TGD31352.1;start_range=.,1;transl_table=11 PYKI01003530.1 Genbank gene 460 861 . - . ID=gene-C9F07_35640;Name=C9F07_35640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35640 PYKI01003530.1 Protein Homology CDS 460 861 . - 0 ID=cds-TGD31353.1;Parent=gene-C9F07_35640;Dbxref=NCBI_GP:TGD31353.1;Name=TGD31353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455762.1;locus_tag=C9F07_35640;product=acyl-CoA thioesterase;protein_id=TGD31353.1;transl_table=11 PYKI01003530.1 Genbank gene 1022 1561 . - . ID=gene-C9F07_35645;Name=C9F07_35645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35645 PYKI01003530.1 Protein Homology CDS 1022 1561 . - 0 ID=cds-TGD31354.1;Parent=gene-C9F07_35645;Dbxref=NCBI_GP:TGD31354.1;Name=TGD31354.1;Note=Involved in cell division%3B probably involved in intracellular septation;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455763.1;locus_tag=C9F07_35645;product=septation protein A;protein_id=TGD31354.1;transl_table=11 PYKI01003530.1 Genbank gene 1618 2094 . - . ID=gene-C9F07_35650;Name=C9F07_35650;end_range=2094,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35650;partial=true PYKI01003530.1 Protein Homology CDS 1618 2094 . - 0 ID=cds-TGD31355.1;Parent=gene-C9F07_35650;Dbxref=NCBI_GP:TGD31355.1;Name=TGD31355.1;end_range=2094,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=C9F07_35650;partial=true;product=hypothetical protein;protein_id=TGD31355.1;transl_table=11 ##sequence-region PYKI01000927.1 1 2088 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000927.1 Genbank region 1 2088 . + . ID=PYKI01000927.1:1..2088;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000927.1 Genbank gene 1 308 . + . ID=gene-C9F07_08460;Name=C9F07_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08460;partial=true;start_range=.,1 PYKI01000927.1 Protein Homology CDS 1 308 . + 2 ID=cds-TGE02819.1;Parent=gene-C9F07_08460;Dbxref=NCBI_GP:TGE02819.1;Name=TGE02819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=C9F07_08460;partial=true;product=DUF4440 domain-containing protein;protein_id=TGE02819.1;start_range=.,1;transl_table=11 PYKI01000927.1 Genbank gene 364 2088 . - . ID=gene-C9F07_08465;Name=mutS;end_range=2088,.;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=C9F07_08465;partial=true PYKI01000927.1 Protein Homology CDS 364 2088 . - 0 ID=cds-TGE02820.1;Parent=gene-C9F07_08465;Dbxref=NCBI_GP:TGE02820.1;Name=TGE02820.1;end_range=2088,.;gbkey=CDS;gene=mutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457300.1;locus_tag=C9F07_08465;partial=true;product=DNA mismatch repair protein MutS;protein_id=TGE02820.1;transl_table=11 ##sequence-region PYKI01002938.1 1 4847 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002938.1 Genbank region 1 4847 . + . ID=PYKI01002938.1:1..4847;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002938.1 Genbank gene 1 873 . + . ID=gene-C9F07_29430;Name=C9F07_29430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29430;partial=true;start_range=.,1 PYKI01002938.1 Protein Homology CDS 1 873 . + 0 ID=cds-TGD42551.1;Parent=gene-C9F07_29430;Dbxref=NCBI_GP:TGD42551.1;Name=TGD42551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406298.1;locus_tag=C9F07_29430;partial=true;product=diaminopimelate decarboxylase;protein_id=TGD42551.1;start_range=.,1;transl_table=11 PYKI01002938.1 Genbank gene 883 1905 . - . ID=gene-C9F07_29435;Name=C9F07_29435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29435 PYKI01002938.1 Protein Homology CDS 883 1905 . - 0 ID=cds-TGD42552.1;Parent=gene-C9F07_29435;Dbxref=NCBI_GP:TGD42552.1;Name=TGD42552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=C9F07_29435;product=LacI family transcriptional regulator;protein_id=TGD42552.1;transl_table=11 PYKI01002938.1 Genbank gene 1916 2944 . - . ID=gene-C9F07_29440;Name=C9F07_29440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29440 PYKI01002938.1 Protein Homology CDS 1916 2944 . - 0 ID=cds-TGD42553.1;Parent=gene-C9F07_29440;Dbxref=NCBI_GP:TGD42553.1;Name=TGD42553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=C9F07_29440;product=transcriptional regulator;protein_id=TGD42553.1;transl_table=11 PYKI01002938.1 Genbank pseudogene 3191 3380 . + . ID=gene-C9F07_29445;Name=C9F07_29445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29445;pseudo=true PYKI01002938.1 Protein Homology CDS 3191 3380 . + 0 ID=cds-C9F07_29445;Parent=gene-C9F07_29445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001422443.1;locus_tag=C9F07_29445;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002938.1 Genbank pseudogene 3295 3488 . + . ID=gene-C9F07_29450;Name=C9F07_29450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29450;pseudo=true PYKI01002938.1 Protein Homology CDS 3295 3488 . + 0 ID=cds-C9F07_29450;Parent=gene-C9F07_29450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395964.1;locus_tag=C9F07_29450;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002938.1 Genbank gene 3537 4847 . + . ID=gene-C9F07_29455;Name=C9F07_29455;end_range=4847,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29455;partial=true PYKI01002938.1 Protein Homology CDS 3537 4847 . + 0 ID=cds-TGD42554.1;Parent=gene-C9F07_29455;Dbxref=NCBI_GP:TGD42554.1;Name=TGD42554.1;Note=Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1;end_range=4847,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=C9F07_29455;partial=true;product=bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-ACP synthetase;protein_id=TGD42554.1;transl_table=11 ##sequence-region PYKI01002166.1 1 9971 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002166.1 Genbank region 1 9971 . + . ID=PYKI01002166.1:1..9971;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002166.1 Genbank pseudogene 70 840 . - . ID=gene-C9F07_21025;Name=C9F07_21025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21025;pseudo=true PYKI01002166.1 Protein Homology CDS 70 840 . - 0 ID=cds-C9F07_21025;Parent=gene-C9F07_21025;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=C9F07_21025;product=permease;pseudo=true;transl_table=11 PYKI01002166.1 Genbank pseudogene 741 958 . - . ID=gene-C9F07_21030;Name=C9F07_21030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21030;pseudo=true PYKI01002166.1 Protein Homology CDS 741 958 . - 0 ID=cds-C9F07_21030;Parent=gene-C9F07_21030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640476.1;locus_tag=C9F07_21030;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002166.1 Genbank gene 1188 1856 . - . ID=gene-C9F07_21035;Name=C9F07_21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21035 PYKI01002166.1 Protein Homology CDS 1188 1856 . - 0 ID=cds-TGD57212.1;Parent=gene-C9F07_21035;Dbxref=NCBI_GP:TGD57212.1;Name=TGD57212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=C9F07_21035;product=glutathione S-transferase;protein_id=TGD57212.1;transl_table=11 PYKI01002166.1 Genbank gene 2149 2607 . - . ID=gene-C9F07_21040;Name=C9F07_21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21040 PYKI01002166.1 Protein Homology CDS 2149 2607 . - 0 ID=cds-TGD57213.1;Parent=gene-C9F07_21040;Dbxref=NCBI_GP:TGD57213.1;Name=TGD57213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458564.1;locus_tag=C9F07_21040;product=redox-sensitive transcriptional activator SoxR;protein_id=TGD57213.1;transl_table=11 PYKI01002166.1 Genbank gene 2694 3017 . + . ID=gene-C9F07_21045;Name=C9F07_21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21045 PYKI01002166.1 Protein Homology CDS 2694 3017 . + 0 ID=cds-TGD57214.1;Parent=gene-C9F07_21045;Dbxref=NCBI_GP:TGD57214.1;Name=TGD57214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=C9F07_21045;product=regulatory protein SoxS;protein_id=TGD57214.1;transl_table=11 PYKI01002166.1 Genbank gene 3005 4606 . - . ID=gene-C9F07_21050;Name=C9F07_21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21050 PYKI01002166.1 Protein Homology CDS 3005 4606 . - 0 ID=cds-TGD57215.1;Parent=gene-C9F07_21050;Dbxref=NCBI_GP:TGD57215.1;Name=TGD57215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458562.1;locus_tag=C9F07_21050;product=EAL domain-containing protein;protein_id=TGD57215.1;transl_table=11 PYKI01002166.1 Genbank gene 5169 5450 . + . ID=gene-C9F07_21055;Name=C9F07_21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21055 PYKI01002166.1 Protein Homology CDS 5169 5450 . + 0 ID=cds-TGD57216.1;Parent=gene-C9F07_21055;Dbxref=NCBI_GP:TGD57216.1;Name=TGD57216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458561.1;locus_tag=C9F07_21055;product=hypothetical protein;protein_id=TGD57216.1;transl_table=11 PYKI01002166.1 Genbank gene 5728 7794 . - . ID=gene-C9F07_21060;Name=C9F07_21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21060 PYKI01002166.1 Protein Homology CDS 5728 7794 . - 0 ID=cds-TGD57217.1;Parent=gene-C9F07_21060;Dbxref=NCBI_GP:TGD57217.1;Name=TGD57217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458560.1;locus_tag=C9F07_21060;product=antibiotic ABC transporter ATP-binding protein;protein_id=TGD57217.1;transl_table=11 PYKI01002166.1 Genbank gene 7834 9971 . - . ID=gene-C9F07_21065;Name=C9F07_21065;end_range=9971,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21065;partial=true PYKI01002166.1 Protein Homology CDS 7834 9971 . - 2 ID=cds-TGD57218.1;Parent=gene-C9F07_21065;Dbxref=NCBI_GP:TGD57218.1;Name=TGD57218.1;end_range=9971,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458559.1;locus_tag=C9F07_21065;partial=true;product=hypothetical protein;protein_id=TGD57218.1;transl_table=11 ##sequence-region PYKI01000306.1 1 2084 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000306.1 Genbank region 1 2084 . + . ID=PYKI01000306.1:1..2084;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000306.1 Genbank gene 1 1049 . - . ID=gene-C9F07_02055;Name=C9F07_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02055;partial=true;start_range=.,1 PYKI01000306.1 Protein Homology CDS 1 1049 . - 0 ID=cds-TGE27783.1;Parent=gene-C9F07_02055;Dbxref=NCBI_GP:TGE27783.1;Name=TGE27783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=C9F07_02055;partial=true;product=aminopeptidase PepB;protein_id=TGE27783.1;start_range=.,1;transl_table=11 PYKI01000306.1 Genbank gene 1103 1303 . - . ID=gene-C9F07_02060;Name=C9F07_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02060 PYKI01000306.1 Protein Homology CDS 1103 1303 . - 0 ID=cds-TGE27784.1;Parent=gene-C9F07_02060;Dbxref=NCBI_GP:TGE27784.1;Name=TGE27784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=C9F07_02060;product=Fe-S assembly protein IscX;protein_id=TGE27784.1;transl_table=11 PYKI01000306.1 Genbank gene 1315 1650 . - . ID=gene-C9F07_02065;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=C9F07_02065 PYKI01000306.1 Protein Homology CDS 1315 1650 . - 0 ID=cds-TGE27785.1;Parent=gene-C9F07_02065;Dbxref=NCBI_GP:TGE27785.1;Name=TGE27785.1;gbkey=CDS;gene=fdx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=C9F07_02065;product=ISC system 2Fe-2S type ferredoxin;protein_id=TGE27785.1;transl_table=11 PYKI01000306.1 Genbank gene 1652 2084 . - . ID=gene-C9F07_02070;Name=hscA;end_range=2084,.;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=C9F07_02070;partial=true PYKI01000306.1 Protein Homology CDS 1652 2084 . - 1 ID=cds-TGE27786.1;Parent=gene-C9F07_02070;Dbxref=NCBI_GP:TGE27786.1;Name=TGE27786.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;end_range=2084,.;gbkey=CDS;gene=hscA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=C9F07_02070;partial=true;product=Fe-S protein assembly chaperone HscA;protein_id=TGE27786.1;transl_table=11 ##sequence-region PYKI01002583.1 1 2082 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002583.1 Genbank region 1 2082 . + . ID=PYKI01002583.1:1..2082;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002583.1 Genbank gene 1 135 . - . ID=gene-C9F07_25635;Name=C9F07_25635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25635;partial=true;start_range=.,1 PYKI01002583.1 Protein Homology CDS 1 135 . - 0 ID=cds-TGD49726.1;Parent=gene-C9F07_25635;Dbxref=NCBI_GP:TGD49726.1;Name=TGD49726.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455317.1;locus_tag=C9F07_25635;partial=true;product=galactose-1-phosphate uridylyltransferase;protein_id=TGD49726.1;start_range=.,1;transl_table=11 PYKI01002583.1 Genbank gene 146 1162 . - . ID=gene-C9F07_25640;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=C9F07_25640 PYKI01002583.1 Protein Homology CDS 146 1162 . - 0 ID=cds-TGD49727.1;Parent=gene-C9F07_25640;Dbxref=NCBI_GP:TGD49727.1;Name=TGD49727.1;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=C9F07_25640;product=UDP-glucose 4-epimerase GalE;protein_id=TGD49727.1;transl_table=11 PYKI01002583.1 Genbank gene 1385 2082 . - . ID=gene-C9F07_25645;Name=C9F07_25645;end_range=2082,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25645;partial=true PYKI01002583.1 Protein Homology CDS 1385 2082 . - 2 ID=cds-TGD49728.1;Parent=gene-C9F07_25645;Dbxref=NCBI_GP:TGD49728.1;Name=TGD49728.1;end_range=2082,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=C9F07_25645;partial=true;product=DUF2167 domain-containing protein;protein_id=TGD49728.1;transl_table=11 ##sequence-region PYKI01001377.1 1 2080 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001377.1 Genbank region 1 2080 . + . ID=PYKI01001377.1:1..2080;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001377.1 Genbank gene 1 1241 . - . ID=gene-C9F07_12950;Name=C9F07_12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12950;partial=true;start_range=.,1 PYKI01001377.1 Protein Homology CDS 1 1241 . - 0 ID=cds-TGD84478.1;Parent=gene-C9F07_12950;Dbxref=NCBI_GP:TGD84478.1;Name=TGD84478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457607.1;locus_tag=C9F07_12950;partial=true;product=hypothetical protein;protein_id=TGD84478.1;start_range=.,1;transl_table=11 PYKI01001377.1 Genbank gene 1529 1711 . + . ID=gene-C9F07_12955;Name=C9F07_12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12955 PYKI01001377.1 Protein Homology CDS 1529 1711 . + 0 ID=cds-TGD84479.1;Parent=gene-C9F07_12955;Dbxref=NCBI_GP:TGD84479.1;Name=TGD84479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011076599.1;locus_tag=C9F07_12955;product=hypothetical protein;protein_id=TGD84479.1;transl_table=11 PYKI01001377.1 Genbank gene 1761 2080 . + . ID=gene-C9F07_12960;Name=C9F07_12960;end_range=2080,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12960;partial=true PYKI01001377.1 Protein Homology CDS 1761 2080 . + 0 ID=cds-TGD84480.1;Parent=gene-C9F07_12960;Dbxref=NCBI_GP:TGD84480.1;Name=TGD84480.1;end_range=2080,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457608.3;locus_tag=C9F07_12960;partial=true;product=hypothetical protein;protein_id=TGD84480.1;transl_table=11 ##sequence-region PYKI01002420.1 1 2078 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002420.1 Genbank region 1 2078 . + . ID=PYKI01002420.1:1..2078;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002420.1 Genbank gene 1 69 . - . ID=gene-C9F07_23910;Name=C9F07_23910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23910;partial=true;start_range=.,1 PYKI01002420.1 Protein Homology CDS 1 69 . - 0 ID=cds-TGD51531.1;Parent=gene-C9F07_23910;Dbxref=NCBI_GP:TGD51531.1;Name=TGD51531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001582269.1;locus_tag=C9F07_23910;partial=true;product=porin family protein;protein_id=TGD51531.1;start_range=.,1;transl_table=11 PYKI01002420.1 Genbank gene 73 258 . - . ID=gene-C9F07_23915;Name=C9F07_23915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23915 PYKI01002420.1 Protein Homology CDS 73 258 . - 0 ID=cds-TGD51532.1;Parent=gene-C9F07_23915;Dbxref=NCBI_GP:TGD51532.1;Name=TGD51532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607915.1;locus_tag=C9F07_23915;product=hypothetical protein;protein_id=TGD51532.1;transl_table=11 PYKI01002420.1 Genbank pseudogene 831 1098 . - . ID=gene-C9F07_23920;Name=C9F07_23920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23920;pseudo=true PYKI01002420.1 Protein Homology CDS 831 1098 . - 0 ID=cds-C9F07_23920;Parent=gene-C9F07_23920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990599.1;locus_tag=C9F07_23920;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002420.1 Genbank gene 1192 1998 . + . ID=gene-C9F07_23925;Name=C9F07_23925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23925 PYKI01002420.1 Protein Homology CDS 1192 1998 . + 0 ID=cds-TGD51530.1;Parent=gene-C9F07_23925;Dbxref=NCBI_GP:TGD51530.1;Name=TGD51530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461953.1;locus_tag=C9F07_23925;product=DUF1460 domain-containing protein;protein_id=TGD51530.1;transl_table=11 ##sequence-region PYKI01002814.1 1 2078 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002814.1 Genbank region 1 2078 . + . ID=PYKI01002814.1:1..2078;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002814.1 Genbank gene 1 651 . + . ID=gene-C9F07_28175;Name=C9F07_28175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28175;partial=true;start_range=.,1 PYKI01002814.1 Protein Homology CDS 1 651 . + 0 ID=cds-TGD45707.1;Parent=gene-C9F07_28175;Dbxref=NCBI_GP:TGD45707.1;Name=TGD45707.1;Note=Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457455.1;locus_tag=C9F07_28175;partial=true;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=TGD45707.1;start_range=.,1;transl_table=11 PYKI01002814.1 Genbank gene 777 1979 . + . ID=gene-C9F07_28180;Name=C9F07_28180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28180 PYKI01002814.1 Protein Homology CDS 777 1979 . + 0 ID=cds-TGD45708.1;Parent=gene-C9F07_28180;Dbxref=NCBI_GP:TGD45708.1;Name=TGD45708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=C9F07_28180;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=TGD45708.1;transl_table=11 ##sequence-region PYKI01002158.1 1 2077 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002158.1 Genbank region 1 2077 . + . ID=PYKI01002158.1:1..2077;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002158.1 Genbank pseudogene 1 860 . - . ID=gene-C9F07_20960;Name=C9F07_20960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20960;pseudo=true PYKI01002158.1 Protein Homology CDS 1 860 . - 0 ID=cds-C9F07_20960;Parent=gene-C9F07_20960;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454838.1;locus_tag=C9F07_20960;product=DNA polymerase III subunit alpha;pseudo=true;transl_table=11 PYKI01002158.1 Genbank gene 884 1480 . - . ID=gene-C9F07_20965;Name=C9F07_20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20965 PYKI01002158.1 Protein Homology CDS 884 1480 . - 0 ID=cds-TGD57231.1;Parent=gene-C9F07_20965;Dbxref=NCBI_GP:TGD57231.1;Name=TGD57231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454837.1;locus_tag=C9F07_20965;product=ribonuclease HII;protein_id=TGD57231.1;transl_table=11 PYKI01002158.1 Genbank gene 1477 2077 . - . ID=gene-C9F07_20970;Name=lpxB;end_range=2077,.;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=C9F07_20970;partial=true PYKI01002158.1 Protein Homology CDS 1477 2077 . - 1 ID=cds-TGD57232.1;Parent=gene-C9F07_20970;Dbxref=NCBI_GP:TGD57232.1;Name=TGD57232.1;end_range=2077,.;gbkey=CDS;gene=lpxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454836.1;locus_tag=C9F07_20970;partial=true;product=lipid-A-disaccharide synthase;protein_id=TGD57232.1;transl_table=11 ##sequence-region PYKI01002661.1 1 2075 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002661.1 Genbank region 1 2075 . + . ID=PYKI01002661.1:1..2075;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002661.1 Genbank gene 1 203 . - . ID=gene-C9F07_26500;Name=C9F07_26500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26500;partial=true;start_range=.,1 PYKI01002661.1 Protein Homology CDS 1 203 . - 0 ID=cds-TGD49206.1;Parent=gene-C9F07_26500;Dbxref=NCBI_GP:TGD49206.1;Name=TGD49206.1;Note=Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456842.1;locus_tag=C9F07_26500;partial=true;product=bifunctional UDP-glucuronic acid oxidase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase;protein_id=TGD49206.1;start_range=.,1;transl_table=11 PYKI01002661.1 Genbank gene 200 1183 . - . ID=gene-C9F07_26505;Name=C9F07_26505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26505 PYKI01002661.1 Protein Homology CDS 200 1183 . - 0 ID=cds-TGD49207.1;Parent=gene-C9F07_26505;Dbxref=NCBI_GP:TGD49207.1;Name=TGD49207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=C9F07_26505;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=TGD49207.1;transl_table=11 PYKI01002661.1 Genbank pseudogene 1186 2075 . - . ID=gene-C9F07_26510;Name=C9F07_26510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26510;pseudo=true PYKI01002661.1 Protein Homology CDS 1186 2075 . - 2 ID=cds-C9F07_26510;Parent=gene-C9F07_26510;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461239.3;locus_tag=C9F07_26510;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01003291.1 1 2074 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003291.1 Genbank region 1 2074 . + . ID=PYKI01003291.1:1..2074;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003291.1 Genbank gene 1 447 . + . ID=gene-C9F07_33100;Name=C9F07_33100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33100;partial=true;start_range=.,1 PYKI01003291.1 Protein Homology CDS 1 447 . + 0 ID=cds-TGD36092.1;Parent=gene-C9F07_33100;Dbxref=NCBI_GP:TGD36092.1;Name=TGD36092.1;Note=with TorA forms the inducible trimethylamine N-oxide reductase which transfers electrons from menaquinones first to TorC then to TorA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=C9F07_33100;partial=true;product=trimethylamine N-oxide reductase cytochrome c-type subunit;protein_id=TGD36092.1;start_range=.,1;transl_table=11 PYKI01003291.1 Genbank gene 437 2074 . + . ID=gene-C9F07_33105;Name=C9F07_33105;end_range=2074,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33105;partial=true PYKI01003291.1 Protein Homology CDS 437 2074 . + 0 ID=cds-TGD36093.1;Parent=gene-C9F07_33105;Dbxref=NCBI_GP:TGD36093.1;Name=TGD36093.1;end_range=2074,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458117.1;locus_tag=C9F07_33105;partial=true;product=trimethylamine-N-oxide reductase TorA;protein_id=TGD36093.1;transl_table=11 ##sequence-region PYKI01002608.1 1 2072 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002608.1 Genbank region 1 2072 . + . ID=PYKI01002608.1:1..2072;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002608.1 Genbank pseudogene 66 344 . - . ID=gene-C9F07_25885;Name=C9F07_25885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25885;pseudo=true PYKI01002608.1 Protein Homology CDS 66 344 . - 0 ID=cds-C9F07_25885;Parent=gene-C9F07_25885;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454782.1;locus_tag=C9F07_25885;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002608.1 Genbank gene 550 1086 . + . ID=gene-C9F07_25890;Name=C9F07_25890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25890 PYKI01002608.1 Protein Homology CDS 550 1086 . + 0 ID=cds-TGD49583.1;Parent=gene-C9F07_25890;Dbxref=NCBI_GP:TGD49583.1;Name=TGD49583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459175.1;locus_tag=C9F07_25890;product=hypoxanthine phosphoribosyltransferase;protein_id=TGD49583.1;transl_table=11 PYKI01002608.1 Genbank gene 1144 1806 . - . ID=gene-C9F07_25895;Name=C9F07_25895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25895 PYKI01002608.1 Protein Homology CDS 1144 1806 . - 0 ID=cds-TGD49581.1;Parent=gene-C9F07_25895;Dbxref=NCBI_GP:TGD49581.1;Name=TGD49581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=C9F07_25895;product=carbonate dehydratase;protein_id=TGD49581.1;transl_table=11 PYKI01002608.1 Genbank gene 1915 2072 . + . ID=gene-C9F07_25900;Name=C9F07_25900;end_range=2072,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25900;partial=true PYKI01002608.1 Protein Homology CDS 1915 2072 . + 0 ID=cds-TGD49582.1;Parent=gene-C9F07_25900;Dbxref=NCBI_GP:TGD49582.1;Name=TGD49582.1;end_range=2072,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414669.1;locus_tag=C9F07_25900;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGD49582.1;transl_table=11 ##sequence-region PYKI01000352.1 1 2070 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000352.1 Genbank region 1 2070 . + . ID=PYKI01000352.1:1..2070;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000352.1 Genbank gene 1 631 . - . ID=gene-C9F07_02625;Name=C9F07_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02625;partial=true;start_range=.,1 PYKI01000352.1 Protein Homology CDS 1 631 . - 0 ID=cds-TGE26815.1;Parent=gene-C9F07_02625;Dbxref=NCBI_GP:TGE26815.1;Name=TGE26815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456907.1;locus_tag=C9F07_02625;partial=true;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=TGE26815.1;start_range=.,1;transl_table=11 PYKI01000352.1 Genbank gene 699 1613 . - . ID=gene-C9F07_02630;Name=C9F07_02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02630 PYKI01000352.1 Protein Homology CDS 699 1613 . - 0 ID=cds-TGE26816.1;Parent=gene-C9F07_02630;Dbxref=NCBI_GP:TGE26816.1;Name=TGE26816.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456908.1;locus_tag=C9F07_02630;product=acetyl-CoA carboxylase carboxyl transferase subunit beta;protein_id=TGE26816.1;transl_table=11 PYKI01000352.1 Genbank gene 1763 2070 . - . ID=gene-C9F07_02635;Name=C9F07_02635;end_range=2070,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02635;partial=true PYKI01000352.1 Protein Homology CDS 1763 2070 . - 2 ID=cds-TGE26817.1;Parent=gene-C9F07_02635;Dbxref=NCBI_GP:TGE26817.1;Name=TGE26817.1;end_range=2070,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456909.1;locus_tag=C9F07_02635;partial=true;product=hypothetical protein;protein_id=TGE26817.1;transl_table=11 ##sequence-region PYKI01002059.1 1 4826 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002059.1 Genbank region 1 4826 . + . ID=PYKI01002059.1:1..4826;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002059.1 Genbank gene 382 726 . + . ID=gene-C9F07_19930;Name=C9F07_19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19930 PYKI01002059.1 Protein Homology CDS 382 726 . + 0 ID=cds-TGD59936.1;Parent=gene-C9F07_19930;Dbxref=NCBI_GP:TGD59936.1;Name=TGD59936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=C9F07_19930;product=DUF1294 domain-containing protein;protein_id=TGD59936.1;transl_table=11 PYKI01002059.1 Genbank pseudogene 847 2072 . - . ID=gene-C9F07_19935;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=pseudogene;locus_tag=C9F07_19935;pseudo=true PYKI01002059.1 Protein Homology CDS 847 2072 . - 0 ID=cds-C9F07_19935;Parent=gene-C9F07_19935;Note=frameshifted;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=C9F07_19935;product=SPI-2 type III secretion system effector SseJ;pseudo=true;transl_table=11 PYKI01002059.1 Genbank gene 2498 3214 . + . ID=gene-C9F07_19940;Name=C9F07_19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19940 PYKI01002059.1 Protein Homology CDS 2498 3214 . + 0 ID=cds-TGD59937.1;Parent=gene-C9F07_19940;Dbxref=NCBI_GP:TGD59937.1;Name=TGD59937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=C9F07_19940;product=hypothetical protein;protein_id=TGD59937.1;transl_table=11 PYKI01002059.1 Genbank gene 3343 3744 . - . ID=gene-C9F07_19945;Name=C9F07_19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19945 PYKI01002059.1 Protein Homology CDS 3343 3744 . - 0 ID=cds-TGD59940.1;Parent=gene-C9F07_19945;Dbxref=NCBI_GP:TGD59940.1;Name=TGD59940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=C9F07_19945;product=effector protein;protein_id=TGD59940.1;transl_table=11 PYKI01002059.1 Genbank gene 4268 4543 . + . ID=gene-C9F07_19950;Name=C9F07_19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19950 PYKI01002059.1 Protein Homology CDS 4268 4543 . + 0 ID=cds-TGD59938.1;Parent=gene-C9F07_19950;Dbxref=NCBI_GP:TGD59938.1;Name=TGD59938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=C9F07_19950;product=hypothetical protein;protein_id=TGD59938.1;transl_table=11 PYKI01002059.1 Genbank gene 4575 4826 . + . ID=gene-C9F07_19955;Name=C9F07_19955;end_range=4826,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19955;partial=true PYKI01002059.1 Protein Homology CDS 4575 4826 . + 0 ID=cds-TGD59939.1;Parent=gene-C9F07_19955;Dbxref=NCBI_GP:TGD59939.1;Name=TGD59939.1;Note=catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols;end_range=4826,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=C9F07_19955;partial=true;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=TGD59939.1;transl_table=11 ##sequence-region PYKI01001843.1 1 2069 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001843.1 Genbank region 1 2069 . + . ID=PYKI01001843.1:1..2069;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001843.1 Genbank gene 160 570 . - . ID=gene-C9F07_17715;Name=C9F07_17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17715 PYKI01001843.1 Protein Homology CDS 160 570 . - 0 ID=cds-TGD63781.1;Parent=gene-C9F07_17715;Dbxref=NCBI_GP:TGD63781.1;Name=TGD63781.1;Note=required for efficient enterobactin production;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=C9F07_17715;product=thioesterase;protein_id=TGD63781.1;transl_table=11 PYKI01001843.1 Genbank gene 567 2069 . - . ID=gene-C9F07_17720;Name=C9F07_17720;end_range=2069,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17720;partial=true PYKI01001843.1 Protein Homology CDS 567 2069 . - 0 ID=cds-TGD63782.1;Parent=gene-C9F07_17720;Dbxref=NCBI_GP:TGD63782.1;Name=TGD63782.1;end_range=2069,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456159.1;locus_tag=C9F07_17720;partial=true;product=hypothetical protein;protein_id=TGD63782.1;transl_table=11 ##sequence-region PYKI01002705.1 1 2067 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002705.1 Genbank region 1 2067 . + . ID=PYKI01002705.1:1..2067;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002705.1 Genbank gene 1 977 . - . ID=gene-C9F07_26975;Name=C9F07_26975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26975;partial=true;start_range=.,1 PYKI01002705.1 Protein Homology CDS 1 977 . - 0 ID=cds-TGD48074.1;Parent=gene-C9F07_26975;Dbxref=NCBI_GP:TGD48074.1;Name=TGD48074.1;Note=Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=C9F07_26975;partial=true;product=DNA polymerase II;protein_id=TGD48074.1;start_range=.,1;transl_table=11 PYKI01002705.1 Genbank gene 1021 1641 . - . ID=gene-C9F07_26980;Name=C9F07_26980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26980 PYKI01002705.1 Protein Homology CDS 1021 1641 . - 0 ID=cds-TGD48073.1;Parent=gene-C9F07_26980;Dbxref=NCBI_GP:TGD48073.1;Name=TGD48073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=C9F07_26980;product=YdcF family protein;protein_id=TGD48073.1;transl_table=11 PYKI01002705.1 Genbank pseudogene 1729 1944 . + . ID=gene-C9F07_26985;Name=C9F07_26985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26985;pseudo=true PYKI01002705.1 Protein Homology CDS 1729 1944 . + 0 ID=cds-C9F07_26985;Parent=gene-C9F07_26985;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446563.1;locus_tag=C9F07_26985;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000364.1 1 2066 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000364.1 Genbank region 1 2066 . + . ID=PYKI01000364.1:1..2066;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000364.1 Genbank gene 106 525 . + . ID=gene-C9F07_02740;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=C9F07_02740 PYKI01000364.1 Protein Homology CDS 106 525 . + 0 ID=cds-TGE23192.1;Parent=gene-C9F07_02740;Dbxref=NCBI_GP:TGE23192.1;Name=TGE23192.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=C9F07_02740;product=Cu(I)-responsive transcriptional regulator;protein_id=TGE23192.1;transl_table=11 PYKI01000364.1 Genbank gene 603 797 . + . ID=gene-C9F07_02745;Name=C9F07_02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02745 PYKI01000364.1 Protein Homology CDS 603 797 . + 0 ID=cds-TGE23193.1;Parent=gene-C9F07_02745;Dbxref=NCBI_GP:TGE23193.1;Name=TGE23193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=C9F07_02745;product=copper chaperone;protein_id=TGE23193.1;transl_table=11 PYKI01000364.1 Genbank gene 1089 2066 . + . ID=gene-C9F07_02750;Name=C9F07_02750;end_range=2066,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02750;partial=true PYKI01000364.1 Protein Homology CDS 1089 2066 . + 0 ID=cds-TGE23194.1;Parent=gene-C9F07_02750;Dbxref=NCBI_GP:TGE23194.1;Name=TGE23194.1;end_range=2066,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454952.1;locus_tag=C9F07_02750;partial=true;product=MFS transporter;protein_id=TGE23194.1;transl_table=11 ##sequence-region PYKI01001854.1 1 2065 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001854.1 Genbank region 1 2065 . + . ID=PYKI01001854.1:1..2065;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001854.1 Genbank pseudogene 71 646 . + . ID=gene-C9F07_17835;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=pseudogene;locus_tag=C9F07_17835;pseudo=true PYKI01001854.1 Protein Homology CDS 71 646 . + 0 ID=cds-C9F07_17835;Parent=gene-C9F07_17835;Note=internal stop;gbkey=CDS;gene=rpoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=C9F07_17835;product=RNA polymerase sigma factor RpoE;pseudo=true;transl_table=11 PYKI01001854.1 Genbank gene 678 1328 . + . ID=gene-C9F07_17840;Name=C9F07_17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17840 PYKI01001854.1 Protein Homology CDS 678 1328 . + 0 ID=cds-TGD63247.1;Parent=gene-C9F07_17840;Dbxref=NCBI_GP:TGD63247.1;Name=TGD63247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=C9F07_17840;product=anti-sigma-E factor RseA;protein_id=TGD63247.1;transl_table=11 PYKI01001854.1 Genbank gene 1328 2065 . + . ID=gene-C9F07_17845;Name=C9F07_17845;end_range=2065,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17845;partial=true PYKI01001854.1 Protein Homology CDS 1328 2065 . + 0 ID=cds-TGD63248.1;Parent=gene-C9F07_17845;Dbxref=NCBI_GP:TGD63248.1;Name=TGD63248.1;end_range=2065,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457114.1;locus_tag=C9F07_17845;partial=true;product=sigma-E factor regulatory protein RseB;protein_id=TGD63248.1;transl_table=11 ##sequence-region PYKI01001510.1 1 2064 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001510.1 Genbank region 1 2064 . + . ID=PYKI01001510.1:1..2064;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001510.1 Genbank gene 1 946 . + . ID=gene-C9F07_14400;Name=C9F07_14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14400;partial=true;start_range=.,1 PYKI01001510.1 Protein Homology CDS 1 946 . + 1 ID=cds-TGD77288.1;Parent=gene-C9F07_14400;Dbxref=NCBI_GP:TGD77288.1;Name=TGD77288.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456762.1;locus_tag=C9F07_14400;partial=true;product=PTS fructose transporter subunit EIIBC;protein_id=TGD77288.1;start_range=.,1;transl_table=11 PYKI01001510.1 Genbank gene 1011 1868 . - . ID=gene-C9F07_14405;Name=C9F07_14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14405 PYKI01001510.1 Protein Homology CDS 1011 1868 . - 0 ID=cds-TGD77289.1;Parent=gene-C9F07_14405;Dbxref=NCBI_GP:TGD77289.1;Name=TGD77289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456761.1;locus_tag=C9F07_14405;product=deoxyribonuclease IV;protein_id=TGD77289.1;transl_table=11 PYKI01001510.1 Genbank gene 1947 2064 . - . ID=gene-C9F07_14410;Name=C9F07_14410;end_range=2064,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14410;partial=true PYKI01001510.1 Protein Homology CDS 1947 2064 . - 1 ID=cds-TGD77290.1;Parent=gene-C9F07_14410;Dbxref=NCBI_GP:TGD77290.1;Name=TGD77290.1;end_range=2064,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456760.1;locus_tag=C9F07_14410;partial=true;product=YeiH family putative sulfate export transporter;protein_id=TGD77290.1;transl_table=11 ##sequence-region PYKI01000602.1 1 2062 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000602.1 Genbank region 1 2062 . + . ID=PYKI01000602.1:1..2062;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000602.1 Genbank gene 1 904 . - . ID=gene-C9F07_05140;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=C9F07_05140;partial=true;start_range=.,1 PYKI01000602.1 Protein Homology CDS 1 904 . - 0 ID=cds-TGE14023.1;Parent=gene-C9F07_05140;Dbxref=NCBI_GP:TGE14023.1;Name=TGE14023.1;Note=P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury;gbkey=CDS;gene=zntA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458345.1;locus_tag=C9F07_05140;partial=true;product=zinc/cadmium/mercury/lead-transporting ATPase;protein_id=TGE14023.1;start_range=.,1;transl_table=11 PYKI01000602.1 Genbank gene 985 1611 . - . ID=gene-C9F07_05145;Name=C9F07_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05145 PYKI01000602.1 Protein Homology CDS 985 1611 . - 0 ID=cds-TGE14024.1;Parent=gene-C9F07_05145;Dbxref=NCBI_GP:TGE14024.1;Name=TGE14024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458346.1;locus_tag=C9F07_05145;product=hypothetical protein;protein_id=TGE14024.1;transl_table=11 PYKI01000602.1 Genbank gene 1753 2062 . + . ID=gene-C9F07_05150;Name=C9F07_05150;end_range=2062,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05150;partial=true PYKI01000602.1 Protein Homology CDS 1753 2062 . + 0 ID=cds-TGE14025.1;Parent=gene-C9F07_05150;Dbxref=NCBI_GP:TGE14025.1;Name=TGE14025.1;end_range=2062,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458347.1;locus_tag=C9F07_05150;partial=true;product=DUF2500 domain-containing protein;protein_id=TGE14025.1;transl_table=11 ##sequence-region PYKI01000892.1 1 2056 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000892.1 Genbank region 1 2056 . + . ID=PYKI01000892.1:1..2056;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000892.1 Genbank gene 1 664 . - . ID=gene-C9F07_08155;Name=C9F07_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08155;partial=true;start_range=.,1 PYKI01000892.1 Protein Homology CDS 1 664 . - 0 ID=cds-TGE03671.1;Parent=gene-C9F07_08155;Dbxref=NCBI_GP:TGE03671.1;Name=TGE03671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456959.1;locus_tag=C9F07_08155;partial=true;product=purine-nucleoside phosphorylase;protein_id=TGE03671.1;start_range=.,1;transl_table=11 PYKI01000892.1 Genbank gene 920 1681 . + . ID=gene-C9F07_08160;Name=C9F07_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08160 PYKI01000892.1 Protein Homology CDS 920 1681 . + 0 ID=cds-TGE03672.1;Parent=gene-C9F07_08160;Dbxref=NCBI_GP:TGE03672.1;Name=TGE03672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=C9F07_08160;product=hypothetical protein;protein_id=TGE03672.1;transl_table=11 PYKI01000892.1 Genbank gene 1743 2056 . - . ID=gene-C9F07_08165;Name=C9F07_08165;end_range=2056,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08165;partial=true PYKI01000892.1 Protein Homology CDS 1743 2056 . - 2 ID=cds-TGE03673.1;Parent=gene-C9F07_08165;Dbxref=NCBI_GP:TGE03673.1;Name=TGE03673.1;end_range=2056,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=C9F07_08165;partial=true;product=hypothetical protein;protein_id=TGE03673.1;transl_table=11 ##sequence-region PYKI01000689.1 1 2055 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000689.1 Genbank region 1 2055 . + . ID=PYKI01000689.1:1..2055;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000689.1 Genbank pseudogene 1 752 . - . ID=gene-C9F07_06010;Name=C9F07_06010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06010;pseudo=true PYKI01000689.1 Protein Homology CDS 1 752 . - 0 ID=cds-C9F07_06010;Parent=gene-C9F07_06010;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=C9F07_06010;product=transcriptional regulator;pseudo=true;transl_table=11 PYKI01000689.1 Genbank gene 1229 1489 . - . ID=gene-C9F07_06015;Name=C9F07_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06015 PYKI01000689.1 Protein Homology CDS 1229 1489 . - 0 ID=cds-TGE11342.1;Parent=gene-C9F07_06015;Dbxref=NCBI_GP:TGE11342.1;Name=TGE11342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991977.1;locus_tag=C9F07_06015;product=transcriptional activator PerC;protein_id=TGE11342.1;transl_table=11 PYKI01000689.1 Genbank gene 1569 2055 . - . ID=gene-C9F07_06020;Name=C9F07_06020;end_range=2055,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06020;partial=true PYKI01000689.1 Protein Homology CDS 1569 2055 . - 1 ID=cds-TGE11343.1;Parent=gene-C9F07_06020;Dbxref=NCBI_GP:TGE11343.1;Name=TGE11343.1;end_range=2055,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454909.1;locus_tag=C9F07_06020;partial=true;product=carbohydrate transporter;protein_id=TGE11343.1;transl_table=11 ##sequence-region PYKI01002265.1 1 2053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002265.1 Genbank region 1 2053 . + . ID=PYKI01002265.1:1..2053;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002265.1 Genbank gene 1 349 . - . ID=gene-C9F07_22160;Name=C9F07_22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22160;partial=true;start_range=.,1 PYKI01002265.1 Protein Homology CDS 1 349 . - 0 ID=cds-TGD55363.1;Parent=gene-C9F07_22160;Dbxref=NCBI_GP:TGD55363.1;Name=TGD55363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456957.1;locus_tag=C9F07_22160;partial=true;product=transcriptional regulator XapR;protein_id=TGD55363.1;start_range=.,1;transl_table=11 PYKI01002265.1 Genbank gene 401 559 . - . ID=gene-C9F07_22165;Name=C9F07_22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22165 PYKI01002265.1 Protein Homology CDS 401 559 . - 0 ID=cds-TGD55364.1;Parent=gene-C9F07_22165;Dbxref=NCBI_GP:TGD55364.1;Name=TGD55364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991992.1;locus_tag=C9F07_22165;product=XapX domain-containing protein;protein_id=TGD55364.1;transl_table=11 PYKI01002265.1 Genbank gene 618 1874 . - . ID=gene-C9F07_22170;Name=C9F07_22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22170 PYKI01002265.1 Protein Homology CDS 618 1874 . - 0 ID=cds-TGD55365.1;Parent=gene-C9F07_22170;Dbxref=NCBI_GP:TGD55365.1;Name=TGD55365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=C9F07_22170;product=MFS transporter;protein_id=TGD55365.1;transl_table=11 PYKI01002265.1 Genbank gene 1929 2053 . - . ID=gene-C9F07_22175;Name=C9F07_22175;end_range=2053,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22175;partial=true PYKI01002265.1 Protein Homology CDS 1929 2053 . - 2 ID=cds-TGD55366.1;Parent=gene-C9F07_22175;Dbxref=NCBI_GP:TGD55366.1;Name=TGD55366.1;end_range=2053,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456959.1;locus_tag=C9F07_22175;partial=true;product=purine-nucleoside phosphorylase;protein_id=TGD55366.1;transl_table=11 ##sequence-region PYKI01000556.1 1 4823 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000556.1 Genbank region 1 4823 . + . ID=PYKI01000556.1:1..4823;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000556.1 Genbank gene 1 675 . - . ID=gene-C9F07_04660;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=C9F07_04660;partial=true;start_range=.,1 PYKI01000556.1 Protein Homology CDS 1 675 . - 0 ID=cds-TGE14960.1;Parent=gene-C9F07_04660;Dbxref=NCBI_GP:TGE14960.1;Name=TGE14960.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=C9F07_04660;partial=true;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=TGE14960.1;start_range=.,1;transl_table=11 PYKI01000556.1 Genbank pseudogene 727 963 . + . ID=gene-C9F07_04665;Name=C9F07_04665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04665;pseudo=true PYKI01000556.1 Protein Homology CDS 727 963 . + 0 ID=cds-C9F07_04665;Parent=gene-C9F07_04665;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495373.1;locus_tag=C9F07_04665;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000556.1 Genbank gene 1360 1755 . + . ID=gene-C9F07_04670;Name=C9F07_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04670 PYKI01000556.1 Protein Homology CDS 1360 1755 . + 0 ID=cds-TGE14961.1;Parent=gene-C9F07_04670;Dbxref=NCBI_GP:TGE14961.1;Name=TGE14961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456360.1;locus_tag=C9F07_04670;product=cytoplasmic protein;protein_id=TGE14961.1;transl_table=11 PYKI01000556.1 Genbank gene 2084 2560 . + . ID=gene-C9F07_04675;Name=C9F07_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04675 PYKI01000556.1 Protein Homology CDS 2084 2560 . + 0 ID=cds-TGE14962.1;Parent=gene-C9F07_04675;Dbxref=NCBI_GP:TGE14962.1;Name=TGE14962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456361.1;locus_tag=C9F07_04675;product=hypothetical protein;protein_id=TGE14962.1;transl_table=11 PYKI01000556.1 Genbank gene 2689 3108 . - . ID=gene-C9F07_04680;Name=C9F07_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04680 PYKI01000556.1 Protein Homology CDS 2689 3108 . - 0 ID=cds-TGE14963.1;Parent=gene-C9F07_04680;Dbxref=NCBI_GP:TGE14963.1;Name=TGE14963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=C9F07_04680;product=N-acetyltransferase;protein_id=TGE14963.1;transl_table=11 PYKI01000556.1 Genbank gene 3237 3437 . - . ID=gene-C9F07_04685;Name=C9F07_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04685 PYKI01000556.1 Protein Homology CDS 3237 3437 . - 0 ID=cds-TGE14964.1;Parent=gene-C9F07_04685;Dbxref=NCBI_GP:TGE14964.1;Name=TGE14964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007801.1;locus_tag=C9F07_04685;product=hypothetical protein;protein_id=TGE14964.1;transl_table=11 PYKI01000556.1 Genbank gene 3477 3743 . + . ID=gene-C9F07_04690;Name=C9F07_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04690 PYKI01000556.1 Protein Homology CDS 3477 3743 . + 0 ID=cds-TGE14965.1;Parent=gene-C9F07_04690;Dbxref=NCBI_GP:TGE14965.1;Name=TGE14965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=C9F07_04690;product=hypothetical protein;protein_id=TGE14965.1;transl_table=11 PYKI01000556.1 Genbank gene 3912 4052 . + . ID=gene-C9F07_04695;Name=C9F07_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04695 PYKI01000556.1 Protein Homology CDS 3912 4052 . + 0 ID=cds-TGE14966.1;Parent=gene-C9F07_04695;Dbxref=NCBI_GP:TGE14966.1;Name=TGE14966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576018.1;locus_tag=C9F07_04695;product=hypothetical protein;protein_id=TGE14966.1;transl_table=11 PYKI01000556.1 Genbank pseudogene 4198 4737 . - . ID=gene-C9F07_04700;Name=C9F07_04700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04700;pseudo=true PYKI01000556.1 Protein Homology CDS 4198 4737 . - 0 ID=cds-C9F07_04700;Parent=gene-C9F07_04700;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=C9F07_04700;product=IS256 family transposase;pseudo=true;transl_table=11 PYKI01000556.1 Genbank pseudogene 4750 4823 . - . ID=gene-C9F07_04705;Name=C9F07_04705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04705;pseudo=true PYKI01000556.1 Protein Homology CDS 4750 4823 . - 2 ID=cds-C9F07_04705;Parent=gene-C9F07_04705;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456556.1;locus_tag=C9F07_04705;product=DNA polymerase IV;pseudo=true;transl_table=11 ##sequence-region PYKI01000384.1 1 2053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000384.1 Genbank region 1 2053 . + . ID=PYKI01000384.1:1..2053;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000384.1 Genbank gene 1 2053 . + . ID=gene-C9F07_02900;Name=C9F07_02900;end_range=2053,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02900;partial=true;start_range=.,1 PYKI01000384.1 Protein Homology CDS 1 2053 . + 0 ID=cds-TGE22789.1;Parent=gene-C9F07_02900;Dbxref=NCBI_GP:TGE22789.1;Name=TGE22789.1;end_range=2053,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683423.1;locus_tag=C9F07_02900;partial=true;product=phosphoribosylformylglycinamidine synthase;protein_id=TGE22789.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002744.1 1 2051 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002744.1 Genbank region 1 2051 . + . ID=PYKI01002744.1:1..2051;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002744.1 Genbank gene 1 628 . + . ID=gene-C9F07_27395;Name=C9F07_27395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27395;partial=true;start_range=.,1 PYKI01002744.1 Protein Homology CDS 1 628 . + 1 ID=cds-TGD47061.1;Parent=gene-C9F07_27395;Dbxref=NCBI_GP:TGD47061.1;Name=TGD47061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=C9F07_27395;partial=true;product=MFS transporter;protein_id=TGD47061.1;start_range=.,1;transl_table=11 PYKI01002744.1 Genbank gene 696 1388 . + . ID=gene-C9F07_27400;Name=C9F07_27400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27400 PYKI01002744.1 Protein Homology CDS 696 1388 . + 0 ID=cds-TGD47062.1;Parent=gene-C9F07_27400;Dbxref=NCBI_GP:TGD47062.1;Name=TGD47062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=C9F07_27400;product=porin OmpL;protein_id=TGD47062.1;transl_table=11 PYKI01002744.1 Genbank gene 1546 1725 . + . ID=gene-C9F07_27405;Name=C9F07_27405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27405 PYKI01002744.1 Protein Homology CDS 1546 1725 . + 0 ID=cds-TGD47063.1;Parent=gene-C9F07_27405;Dbxref=NCBI_GP:TGD47063.1;Name=TGD47063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001042095.1;locus_tag=C9F07_27405;product=hypothetical protein;protein_id=TGD47063.1;transl_table=11 PYKI01002744.1 Genbank gene 1780 2051 . - . ID=gene-C9F07_27410;Name=C9F07_27410;end_range=2051,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27410;partial=true PYKI01002744.1 Protein Homology CDS 1780 2051 . - 2 ID=cds-TGD47064.1;Parent=gene-C9F07_27410;Dbxref=NCBI_GP:TGD47064.1;Name=TGD47064.1;end_range=2051,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458041.1;locus_tag=C9F07_27410;partial=true;product=hypothetical protein;protein_id=TGD47064.1;transl_table=11 ##sequence-region PYKI01001644.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001644.1 Genbank region 1 2047 . + . ID=PYKI01001644.1:1..2047;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001644.1 Genbank gene 1 293 . + . ID=gene-C9F07_15700;Name=C9F07_15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15700;partial=true;start_range=.,1 PYKI01001644.1 Protein Homology CDS 1 293 . + 2 ID=cds-TGD70328.1;Parent=gene-C9F07_15700;Dbxref=NCBI_GP:TGD70328.1;Name=TGD70328.1;Note=involved in the movement of lipid III across the membrane;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457821.1;locus_tag=C9F07_15700;partial=true;product=lipid III flippase WzxE;protein_id=TGD70328.1;start_range=.,1;transl_table=11 PYKI01001644.1 Genbank gene 290 1369 . + . ID=gene-C9F07_15705;Name=C9F07_15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15705 PYKI01001644.1 Protein Homology CDS 290 1369 . + 0 ID=cds-TGD70329.1;Parent=gene-C9F07_15705;Dbxref=NCBI_GP:TGD70329.1;Name=TGD70329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=C9F07_15705;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=TGD70329.1;transl_table=11 PYKI01001644.1 Genbank gene 1366 2047 . + . ID=gene-C9F07_15710;Name=C9F07_15710;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15710;partial=true PYKI01001644.1 Protein Homology CDS 1366 2047 . + 0 ID=cds-TGD70330.1;Parent=gene-C9F07_15710;Dbxref=NCBI_GP:TGD70330.1;Name=TGD70330.1;Note=enterobacterial common antigen polymerase;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457819.1;locus_tag=C9F07_15710;partial=true;product=O-antigen assembly polymerase;protein_id=TGD70330.1;transl_table=11 ##sequence-region PYKI01002353.1 1 2046 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002353.1 Genbank region 1 2046 . + . ID=PYKI01002353.1:1..2046;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002353.1 Genbank gene 1 86 . + . ID=gene-C9F07_23110;Name=C9F07_23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23110;partial=true;start_range=.,1 PYKI01002353.1 Protein Homology CDS 1 86 . + 2 ID=cds-TGD53188.1;Parent=gene-C9F07_23110;Dbxref=NCBI_GP:TGD53188.1;Name=TGD53188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001547303.1;locus_tag=C9F07_23110;partial=true;product=DNA ligase;protein_id=TGD53188.1;start_range=.,1;transl_table=11 PYKI01002353.1 Genbank gene 88 306 . + . ID=gene-C9F07_23115;Name=C9F07_23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23115 PYKI01002353.1 Protein Homology CDS 88 306 . + 0 ID=cds-TGD53189.1;Parent=gene-C9F07_23115;Dbxref=NCBI_GP:TGD53189.1;Name=TGD53189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_944557.1;locus_tag=C9F07_23115;product=hypothetical protein;protein_id=TGD53189.1;transl_table=11 PYKI01002353.1 Genbank gene 303 1301 . - . ID=gene-C9F07_23120;Name=C9F07_23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23120 PYKI01002353.1 Protein Homology CDS 303 1301 . - 0 ID=cds-TGD53190.1;Parent=gene-C9F07_23120;Dbxref=NCBI_GP:TGD53190.1;Name=TGD53190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456962.1;locus_tag=C9F07_23120;product=bile acid:sodium symporter;protein_id=TGD53190.1;transl_table=11 PYKI01002353.1 Genbank gene 1391 2046 . + . ID=gene-C9F07_23125;Name=C9F07_23125;end_range=2046,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23125;partial=true PYKI01002353.1 Protein Homology CDS 1391 2046 . + 0 ID=cds-TGD53191.1;Parent=gene-C9F07_23125;Dbxref=NCBI_GP:TGD53191.1;Name=TGD53191.1;end_range=2046,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456961.1;locus_tag=C9F07_23125;partial=true;product=LysR family transcriptional regulator;protein_id=TGD53191.1;transl_table=11 ##sequence-region PYKI01003414.1 1 2046 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003414.1 Genbank region 1 2046 . + . ID=PYKI01003414.1:1..2046;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003414.1 Genbank pseudogene 55 621 . + . ID=gene-C9F07_34325;Name=C9F07_34325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34325;pseudo=true PYKI01003414.1 Protein Homology CDS 55 621 . + 0 ID=cds-C9F07_34325;Parent=gene-C9F07_34325;Note=involved in the stability of the curlin proteins during assembly%3B involved in the secretion of the major curlin subunit CsgA across the outer membrane%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455633.1;locus_tag=C9F07_34325;product=curli production assembly/transport protein CsgG;pseudo=true;transl_table=11 PYKI01003414.1 Genbank gene 660 1190 . - . ID=gene-C9F07_34330;Name=C9F07_34330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34330 PYKI01003414.1 Protein Homology CDS 660 1190 . - 0 ID=cds-TGD33777.1;Parent=gene-C9F07_34330;Dbxref=NCBI_GP:TGD33777.1;Name=TGD33777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455632.1;locus_tag=C9F07_34330;product=hypothetical protein;protein_id=TGD33777.1;transl_table=11 PYKI01003414.1 Genbank gene 1243 1797 . - . ID=gene-C9F07_34335;Name=C9F07_34335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34335 PYKI01003414.1 Protein Homology CDS 1243 1797 . - 0 ID=cds-TGD33778.1;Parent=gene-C9F07_34335;Dbxref=NCBI_GP:TGD33778.1;Name=TGD33778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455631.1;locus_tag=C9F07_34335;product=molecular chaperone;protein_id=TGD33778.1;transl_table=11 PYKI01003414.1 Genbank gene 1821 2046 . - . ID=gene-C9F07_34340;Name=C9F07_34340;end_range=2046,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34340;partial=true PYKI01003414.1 Protein Homology CDS 1821 2046 . - 1 ID=cds-TGD33779.1;Parent=gene-C9F07_34340;Dbxref=NCBI_GP:TGD33779.1;Name=TGD33779.1;end_range=2046,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455630.1;locus_tag=C9F07_34340;partial=true;product=hypothetical protein;protein_id=TGD33779.1;transl_table=11 ##sequence-region PYKI01003356.1 1 2040 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003356.1 Genbank region 1 2040 . + . ID=PYKI01003356.1:1..2040;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003356.1 Genbank direct_repeat 33 1710 . + . ID=id-PYKI01003356.1:33..1710;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2,COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=94..122;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg PYKI01003356.1 Genbank gene 1808 2040 . + . ID=gene-C9F07_33810;Name=C9F07_33810;end_range=2040,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33810;partial=true PYKI01003356.1 Protein Homology CDS 1808 2040 . + 0 ID=cds-TGD35006.1;Parent=gene-C9F07_33810;Dbxref=NCBI_GP:TGD35006.1;Name=TGD35006.1;end_range=2040,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457339.1;locus_tag=C9F07_33810;partial=true;product=MBL fold metallo-hydrolase;protein_id=TGD35006.1;transl_table=11 ##sequence-region PYKI01001715.1 1 2040 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001715.1 Genbank region 1 2040 . + . ID=PYKI01001715.1:1..2040;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001715.1 Genbank pseudogene 15 437 . - . ID=gene-C9F07_16375;Name=C9F07_16375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16375;pseudo=true PYKI01001715.1 Protein Homology CDS 15 437 . - 0 ID=cds-C9F07_16375;Parent=gene-C9F07_16375;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=C9F07_16375;product=serine--tRNA ligase;pseudo=true;transl_table=11 PYKI01001715.1 Genbank gene 696 2039 . - . ID=gene-C9F07_16380;Name=C9F07_16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16380 PYKI01001715.1 Protein Homology CDS 696 2039 . - 0 ID=cds-TGD69102.1;Parent=gene-C9F07_16380;Dbxref=NCBI_GP:TGD69102.1;Name=TGD69102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455450.1;locus_tag=C9F07_16380;product=recombination factor protein RarA;protein_id=TGD69102.1;transl_table=11 ##sequence-region PYKI01002642.1 1 2037 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002642.1 Genbank region 1 2037 . + . ID=PYKI01002642.1:1..2037;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002642.1 Genbank gene 1 1156 . - . ID=gene-C9F07_26325;Name=C9F07_26325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26325;partial=true;start_range=.,1 PYKI01002642.1 Protein Homology CDS 1 1156 . - 0 ID=cds-TGD49393.1;Parent=gene-C9F07_26325;Dbxref=NCBI_GP:TGD49393.1;Name=TGD49393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=C9F07_26325;partial=true;product=EscN/YscN/HrcN family type III secretion system ATPase;protein_id=TGD49393.1;start_range=.,1;transl_table=11 PYKI01002642.1 Genbank gene 1146 2037 . - . ID=gene-C9F07_26330;Name=ssaV;end_range=2037,.;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=C9F07_26330;partial=true PYKI01002642.1 Protein Homology CDS 1146 2037 . - 1 ID=cds-TGD49394.1;Parent=gene-C9F07_26330;Dbxref=NCBI_GP:TGD49394.1;Name=TGD49394.1;end_range=2037,.;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=C9F07_26330;partial=true;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=TGD49394.1;transl_table=11 ##sequence-region PYKI01002624.1 1 2035 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002624.1 Genbank region 1 2035 . + . ID=PYKI01002624.1:1..2035;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002624.1 Genbank gene 1 561 . + . ID=gene-C9F07_26115;Name=C9F07_26115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26115;partial=true;start_range=.,1 PYKI01002624.1 Protein Homology CDS 1 561 . + 0 ID=cds-TGD49485.1;Parent=gene-C9F07_26115;Dbxref=NCBI_GP:TGD49485.1;Name=TGD49485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=C9F07_26115;partial=true;product=transcriptional regulator;protein_id=TGD49485.1;start_range=.,1;transl_table=11 PYKI01002624.1 Genbank gene 678 1151 . + . ID=gene-C9F07_26120;Name=C9F07_26120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26120 PYKI01002624.1 Protein Homology CDS 678 1151 . + 0 ID=cds-TGD49486.1;Parent=gene-C9F07_26120;Dbxref=NCBI_GP:TGD49486.1;Name=TGD49486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458261.1;locus_tag=C9F07_26120;product=electron transporter;protein_id=TGD49486.1;transl_table=11 PYKI01002624.1 Genbank pseudogene 1188 2035 . - . ID=gene-C9F07_26125;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=pseudogene;locus_tag=C9F07_26125;pseudo=true PYKI01002624.1 Protein Homology CDS 1188 2035 . - 2 ID=cds-C9F07_26125;Parent=gene-C9F07_26125;Note=transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458262.1;locus_tag=C9F07_26125;product=valine--pyruvate transaminase;pseudo=true;transl_table=11 ##sequence-region PYKI01001360.1 1 4819 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001360.1 Genbank region 1 4819 . + . ID=PYKI01001360.1:1..4819;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001360.1 Genbank gene 1 1806 . + . ID=gene-C9F07_12770;Name=C9F07_12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12770;partial=true;start_range=.,1 PYKI01001360.1 Protein Homology CDS 1 1806 . + 0 ID=cds-TGD85004.1;Parent=gene-C9F07_12770;Dbxref=NCBI_GP:TGD85004.1;Name=TGD85004.1;Note=Fep%3B Cbt%3B Cbr%3B FeuB%3B FepA%3B PfeA%3B IroN%3B BfeA%3B outer membrane receptor of ferric enterobactin and colicins B and D%3B interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461704.3;locus_tag=C9F07_12770;partial=true;product=TonB-dependent siderophore receptor;protein_id=TGD85004.1;start_range=.,1;transl_table=11 PYKI01001360.1 Genbank gene 1848 2783 . - . ID=gene-C9F07_12775;Name=C9F07_12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12775 PYKI01001360.1 Protein Homology CDS 1848 2783 . - 0 ID=cds-TGD85005.1;Parent=gene-C9F07_12775;Dbxref=NCBI_GP:TGD85005.1;Name=TGD85005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=C9F07_12775;product=hydrolase;protein_id=TGD85005.1;transl_table=11 PYKI01001360.1 Genbank gene 2815 4059 . - . ID=gene-C9F07_12780;Name=C9F07_12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12780 PYKI01001360.1 Protein Homology CDS 2815 4059 . - 0 ID=cds-TGD85006.1;Parent=gene-C9F07_12780;Dbxref=NCBI_GP:TGD85006.1;Name=TGD85006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=C9F07_12780;product=enterochelin esterase;protein_id=TGD85006.1;transl_table=11 PYKI01001360.1 Genbank gene 4169 4819 . - . ID=gene-C9F07_12785;Name=C9F07_12785;end_range=4819,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12785;partial=true PYKI01001360.1 Protein Homology CDS 4169 4819 . - 0 ID=cds-TGD85007.1;Parent=gene-C9F07_12785;Dbxref=NCBI_GP:TGD85007.1;Name=TGD85007.1;end_range=4819,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457174.1;locus_tag=C9F07_12785;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGD85007.1;transl_table=11 ##sequence-region PYKI01003521.1 1 2034 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003521.1 Genbank region 1 2034 . + . ID=PYKI01003521.1:1..2034;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003521.1 Genbank gene 1 705 . - . ID=gene-C9F07_35510;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=C9F07_35510;partial=true;start_range=.,1 PYKI01003521.1 Protein Homology CDS 1 705 . - 0 ID=cds-TGD31532.1;Parent=gene-C9F07_35510;Dbxref=NCBI_GP:TGD31532.1;Name=TGD31532.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457222.1;locus_tag=C9F07_35510;partial=true;product=recombinase RecA;protein_id=TGD31532.1;start_range=.,1;transl_table=11 PYKI01003521.1 Genbank gene 790 1287 . - . ID=gene-C9F07_35515;Name=C9F07_35515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35515 PYKI01003521.1 Protein Homology CDS 790 1287 . - 0 ID=cds-TGD31535.1;Parent=gene-C9F07_35515;Dbxref=NCBI_GP:TGD31535.1;Name=TGD31535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=C9F07_35515;product=nicotinamide-nucleotide amidase;protein_id=TGD31535.1;transl_table=11 PYKI01003521.1 Genbank gene 1482 1727 . + . ID=gene-C9F07_35520;Name=C9F07_35520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35520 PYKI01003521.1 Protein Homology CDS 1482 1727 . + 0 ID=cds-TGD31533.1;Parent=gene-C9F07_35520;Dbxref=NCBI_GP:TGD31533.1;Name=TGD31533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=C9F07_35520;product=hypothetical protein;protein_id=TGD31533.1;transl_table=11 PYKI01003521.1 Genbank gene 1765 2034 . - . ID=gene-C9F07_35525;Name=C9F07_35525;end_range=2034,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35525;partial=true PYKI01003521.1 Protein Homology CDS 1765 2034 . - 0 ID=cds-TGD31534.1;Parent=gene-C9F07_35525;Dbxref=NCBI_GP:TGD31534.1;Name=TGD31534.1;Note=membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan;end_range=2034,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457224.1;locus_tag=C9F07_35525;partial=true;product=murein transglycosylase B;protein_id=TGD31534.1;transl_table=11 ##sequence-region PYKI01000351.1 1 2033 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000351.1 Genbank region 1 2033 . + . ID=PYKI01000351.1:1..2033;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000351.1 Genbank gene 1 529 . - . ID=gene-C9F07_02605;Name=C9F07_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02605;partial=true;start_range=.,1 PYKI01000351.1 Protein Homology CDS 1 529 . - 0 ID=cds-TGE26818.1;Parent=gene-C9F07_02605;Dbxref=NCBI_GP:TGE26818.1;Name=TGE26818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456089.1;locus_tag=C9F07_02605;partial=true;product=fusaric acid resistance protein;protein_id=TGE26818.1;start_range=.,1;transl_table=11 PYKI01000351.1 Genbank gene 529 1425 . - . ID=gene-C9F07_02610;Name=C9F07_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02610 PYKI01000351.1 Protein Homology CDS 529 1425 . - 0 ID=cds-TGE26819.1;Parent=gene-C9F07_02610;Dbxref=NCBI_GP:TGE26819.1;Name=TGE26819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460405.1;locus_tag=C9F07_02610;product=HlyD family secretion protein;protein_id=TGE26819.1;transl_table=11 PYKI01000351.1 Genbank gene 1392 1628 . - . ID=gene-C9F07_02615;Name=C9F07_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02615 PYKI01000351.1 Protein Homology CDS 1392 1628 . - 0 ID=cds-TGE26820.1;Parent=gene-C9F07_02615;Dbxref=NCBI_GP:TGE26820.1;Name=TGE26820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=C9F07_02615;product=DUF1656 domain-containing protein;protein_id=TGE26820.1;transl_table=11 PYKI01000351.1 Genbank gene 1823 2033 . + . ID=gene-C9F07_02620;Name=C9F07_02620;end_range=2033,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02620;partial=true PYKI01000351.1 Protein Homology CDS 1823 2033 . + 0 ID=cds-TGE26821.1;Parent=gene-C9F07_02620;Dbxref=NCBI_GP:TGE26821.1;Name=TGE26821.1;end_range=2033,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=C9F07_02620;partial=true;product=transcriptional regulator SlyA;protein_id=TGE26821.1;transl_table=11 ##sequence-region PYKI01003543.1 1 2033 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003543.1 Genbank region 1 2033 . + . ID=PYKI01003543.1:1..2033;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003543.1 Genbank gene 316 1203 . + . ID=gene-C9F07_35765;Name=C9F07_35765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35765 PYKI01003543.1 Protein Homology CDS 316 1203 . + 0 ID=cds-TGD30948.1;Parent=gene-C9F07_35765;Dbxref=NCBI_GP:TGD30948.1;Name=TGD30948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454963.1;locus_tag=C9F07_35765;product=methylisocitrate lyase;protein_id=TGD30948.1;transl_table=11 PYKI01003543.1 Genbank gene 1314 2033 . + . ID=gene-C9F07_35770;Name=C9F07_35770;end_range=2033,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35770;partial=true PYKI01003543.1 Protein Homology CDS 1314 2033 . + 0 ID=cds-TGD30949.1;Parent=gene-C9F07_35770;Dbxref=NCBI_GP:TGD30949.1;Name=TGD30949.1;Note=catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate%3B also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity;end_range=2033,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454964.1;locus_tag=C9F07_35770;partial=true;product=2-methylcitrate synthase;protein_id=TGD30949.1;transl_table=11 ##sequence-region PYKI01001200.1 1 2026 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001200.1 Genbank region 1 2026 . + . ID=PYKI01001200.1:1..2026;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001200.1 Genbank gene 1 357 . - . ID=gene-C9F07_11235;Name=C9F07_11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11235;partial=true;start_range=.,1 PYKI01001200.1 Protein Homology CDS 1 357 . - 0 ID=cds-TGD91667.1;Parent=gene-C9F07_11235;Dbxref=NCBI_GP:TGD91667.1;Name=TGD91667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=C9F07_11235;partial=true;product=peptide ABC transporter permease;protein_id=TGD91667.1;start_range=.,1;transl_table=11 PYKI01001200.1 Genbank gene 357 1991 . - . ID=gene-C9F07_11240;Name=C9F07_11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11240 PYKI01001200.1 Protein Homology CDS 357 1991 . - 0 ID=cds-TGD91668.1;Parent=gene-C9F07_11240;Dbxref=NCBI_GP:TGD91668.1;Name=TGD91668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=C9F07_11240;product=nickel ABC transporter substrate-binding protein;protein_id=TGD91668.1;transl_table=11 ##sequence-region PYKI01002671.1 1 2025 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002671.1 Genbank region 1 2025 . + . ID=PYKI01002671.1:1..2025;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002671.1 Genbank gene 1 516 . - . ID=gene-C9F07_26600;Name=C9F07_26600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26600;partial=true;start_range=.,1 PYKI01002671.1 Protein Homology CDS 1 516 . - 0 ID=cds-TGD48851.1;Parent=gene-C9F07_26600;Dbxref=NCBI_GP:TGD48851.1;Name=TGD48851.1;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457207.1;locus_tag=C9F07_26600;partial=true;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=TGD48851.1;start_range=.,1;transl_table=11 PYKI01002671.1 Genbank gene 527 2025 . - . ID=gene-C9F07_26605;Name=C9F07_26605;end_range=2025,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26605;partial=true PYKI01002671.1 Protein Homology CDS 527 2025 . - 2 ID=cds-TGD48852.1;Parent=gene-C9F07_26605;Dbxref=NCBI_GP:TGD48852.1;Name=TGD48852.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;end_range=2025,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461733.1;locus_tag=C9F07_26605;partial=true;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=TGD48852.1;transl_table=11 ##sequence-region PYKI01000661.1 1 2023 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000661.1 Genbank region 1 2023 . + . ID=PYKI01000661.1:1..2023;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000661.1 Genbank gene 1 977 . - . ID=gene-C9F07_05750;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;gene_synonym=aarF,yigQ,yigR;locus_tag=C9F07_05750;partial=true;start_range=.,1 PYKI01000661.1 Protein Homology CDS 1 977 . - 0 ID=cds-TGE12070.1;Parent=gene-C9F07_05750;Dbxref=NCBI_GP:TGE12070.1;Name=TGE12070.1;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions;gbkey=CDS;gene=ubiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457779.1;locus_tag=C9F07_05750;partial=true;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=TGE12070.1;start_range=.,1;transl_table=11 PYKI01000661.1 Genbank gene 974 1579 . - . ID=gene-C9F07_05755;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=C9F07_05755 PYKI01000661.1 Protein Homology CDS 974 1579 . - 0 ID=cds-TGE12071.1;Parent=gene-C9F07_05755;Dbxref=NCBI_GP:TGE12071.1;Name=TGE12071.1;gbkey=CDS;gene=ubiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457780.1;locus_tag=C9F07_05755;product=ubiquinone biosynthesis protein UbiJ;protein_id=TGE12071.1;transl_table=11 PYKI01000661.1 Genbank gene 1589 2023 . - . ID=gene-C9F07_05760;Name=ubiE;end_range=2023,.;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=C9F07_05760;partial=true PYKI01000661.1 Protein Homology CDS 1589 2023 . - 0 ID=cds-TGE12072.1;Parent=gene-C9F07_05760;Dbxref=NCBI_GP:TGE12072.1;Name=TGE12072.1;Note=Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone;end_range=2023,.;gbkey=CDS;gene=ubiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457781.1;locus_tag=C9F07_05760;partial=true;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase;protein_id=TGE12072.1;transl_table=11 ##sequence-region PYKI01001964.1 1 2023 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001964.1 Genbank region 1 2023 . + . ID=PYKI01001964.1:1..2023;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001964.1 Genbank gene 1 746 . - . ID=gene-C9F07_18945;Name=C9F07_18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18945;partial=true;start_range=.,1 PYKI01001964.1 Protein Homology CDS 1 746 . - 0 ID=cds-TGD60363.1;Parent=gene-C9F07_18945;Dbxref=NCBI_GP:TGD60363.1;Name=TGD60363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456307.1;locus_tag=C9F07_18945;partial=true;product=muramoyltetrapeptide carboxypeptidase;protein_id=TGD60363.1;start_range=.,1;transl_table=11 PYKI01001964.1 Genbank gene 917 1528 . + . ID=gene-C9F07_18950;Name=C9F07_18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18950 PYKI01001964.1 Protein Homology CDS 917 1528 . + 0 ID=cds-TGD60364.1;Parent=gene-C9F07_18950;Dbxref=NCBI_GP:TGD60364.1;Name=TGD60364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456306.1;locus_tag=C9F07_18950;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=TGD60364.1;transl_table=11 PYKI01001964.1 Genbank gene 1542 2023 . - . ID=gene-C9F07_18955;Name=ycgR;end_range=2023,.;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=C9F07_18955;partial=true PYKI01001964.1 Protein Homology CDS 1542 2023 . - 2 ID=cds-TGD60365.1;Parent=gene-C9F07_18955;Dbxref=NCBI_GP:TGD60365.1;Name=TGD60365.1;end_range=2023,.;gbkey=CDS;gene=ycgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=C9F07_18955;partial=true;product=flagellar brake protein YcgR;protein_id=TGD60365.1;transl_table=11 ##sequence-region PYKI01001505.1 1 2019 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001505.1 Genbank region 1 2019 . + . ID=PYKI01001505.1:1..2019;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001505.1 Genbank gene 157 825 . + . ID=gene-C9F07_14325;Name=C9F07_14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14325 PYKI01001505.1 Protein Homology CDS 157 825 . + 0 ID=cds-TGD77796.1;Parent=gene-C9F07_14325;Dbxref=NCBI_GP:TGD77796.1;Name=TGD77796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456189.1;locus_tag=C9F07_14325;product=hexitol phosphatase HxpB;protein_id=TGD77796.1;transl_table=11 PYKI01001505.1 Genbank gene 963 1562 . + . ID=gene-C9F07_14330;Name=C9F07_14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14330 PYKI01001505.1 Protein Homology CDS 963 1562 . + 0 ID=cds-TGD77797.1;Parent=gene-C9F07_14330;Dbxref=NCBI_GP:TGD77797.1;Name=TGD77797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=C9F07_14330;product=metal-dependent hydrolase;protein_id=TGD77797.1;transl_table=11 PYKI01001505.1 Genbank gene 1699 2019 . + . ID=gene-C9F07_14335;Name=C9F07_14335;end_range=2019,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14335;partial=true PYKI01001505.1 Protein Homology CDS 1699 2019 . + 0 ID=cds-TGD77798.1;Parent=gene-C9F07_14335;Dbxref=NCBI_GP:TGD77798.1;Name=TGD77798.1;end_range=2019,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=C9F07_14335;partial=true;product=hypothetical protein;protein_id=TGD77798.1;transl_table=11 ##sequence-region PYKI01002542.1 1 2019 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002542.1 Genbank region 1 2019 . + . ID=PYKI01002542.1:1..2019;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002542.1 Genbank pseudogene 51 932 . - . ID=gene-C9F07_25210;Name=C9F07_25210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25210;pseudo=true PYKI01002542.1 Protein Homology CDS 51 932 . - 0 ID=cds-C9F07_25210;Parent=gene-C9F07_25210;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457112.1;locus_tag=C9F07_25210;product=elongation factor 4;pseudo=true;transl_table=11 PYKI01002542.1 Genbank gene 1038 1154 . - . ID=gene-C9F07_25215;Name=C9F07_25215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25215 PYKI01002542.1 Protein Homology CDS 1038 1154 . - 0 ID=cds-TGD49977.1;Parent=gene-C9F07_25215;Dbxref=NCBI_GP:TGD49977.1;Name=TGD49977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218543.1;locus_tag=C9F07_25215;product=transcriptional regulator;protein_id=TGD49977.1;transl_table=11 PYKI01002542.1 Genbank gene 1184 1663 . - . ID=gene-C9F07_25220;Name=C9F07_25220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25220 PYKI01002542.1 Protein Homology CDS 1184 1663 . - 0 ID=cds-TGD49978.1;Parent=gene-C9F07_25220;Dbxref=NCBI_GP:TGD49978.1;Name=TGD49978.1;Note=involved in the reduction of the SoxR iron-sulfur cluster;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=C9F07_25220;product=SoxR reducing system protein RseC;protein_id=TGD49978.1;transl_table=11 PYKI01002542.1 Genbank gene 1660 2019 . - . ID=gene-C9F07_25225;Name=rseB;end_range=2019,.;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=C9F07_25225;partial=true PYKI01002542.1 Protein Homology CDS 1660 2019 . - 0 ID=cds-TGD49979.1;Parent=gene-C9F07_25225;Dbxref=NCBI_GP:TGD49979.1;Name=TGD49979.1;Note=periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP;end_range=2019,.;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=C9F07_25225;partial=true;product=sigma-E factor regulatory protein RseB;protein_id=TGD49979.1;transl_table=11 ##sequence-region PYKI01003163.1 1 4799 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003163.1 Genbank region 1 4799 . + . ID=PYKI01003163.1:1..4799;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003163.1 Genbank gene 1 251 . - . ID=gene-C9F07_31735;Name=C9F07_31735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31735;partial=true;start_range=.,1 PYKI01003163.1 Protein Homology CDS 1 251 . - 0 ID=cds-TGD38144.1;Parent=gene-C9F07_31735;Dbxref=NCBI_GP:TGD38144.1;Name=TGD38144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=C9F07_31735;partial=true;product=oligopeptidase A;protein_id=TGD38144.1;start_range=.,1;transl_table=11 PYKI01003163.1 Genbank gene 433 1704 . - . ID=gene-C9F07_31740;Name=C9F07_31740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31740 PYKI01003163.1 Protein Homology CDS 433 1704 . - 0 ID=cds-TGD38145.1;Parent=gene-C9F07_31740;Dbxref=NCBI_GP:TGD38145.1;Name=TGD38145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462496.1;locus_tag=C9F07_31740;product=phosphatase PAP2 family protein;protein_id=TGD38145.1;transl_table=11 PYKI01003163.1 Genbank gene 1915 2757 . + . ID=gene-C9F07_31745;Name=C9F07_31745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31745 PYKI01003163.1 Protein Homology CDS 1915 2757 . + 0 ID=cds-TGD38146.1;Parent=gene-C9F07_31745;Dbxref=NCBI_GP:TGD38146.1;Name=TGD38146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122498.1;locus_tag=C9F07_31745;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=TGD38146.1;transl_table=11 PYKI01003163.1 Genbank gene 2862 4214 . + . ID=gene-C9F07_31750;Name=C9F07_31750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31750 PYKI01003163.1 Protein Homology CDS 2862 4214 . + 0 ID=cds-TGD38147.1;Parent=gene-C9F07_31750;Dbxref=NCBI_GP:TGD38147.1;Name=TGD38147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=C9F07_31750;product=glutathione-disulfide reductase;protein_id=TGD38147.1;transl_table=11 PYKI01003163.1 Genbank gene 4261 4799 . - . ID=gene-C9F07_31755;Name=C9F07_31755;end_range=4799,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31755;partial=true PYKI01003163.1 Protein Homology CDS 4261 4799 . - 2 ID=cds-TGD38148.1;Parent=gene-C9F07_31755;Dbxref=NCBI_GP:TGD38148.1;Name=TGD38148.1;end_range=4799,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=C9F07_31755;partial=true;product=L-asparaginase;protein_id=TGD38148.1;transl_table=11 ##sequence-region PYKI01000983.1 1 2017 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000983.1 Genbank region 1 2017 . + . ID=PYKI01000983.1:1..2017;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000983.1 Genbank gene 1 268 . - . ID=gene-C9F07_08965;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=C9F07_08965;partial=true;start_range=.,1 PYKI01000983.1 Protein Homology CDS 1 268 . - 0 ID=cds-TGD99549.1;Parent=gene-C9F07_08965;Dbxref=NCBI_GP:TGD99549.1;Name=TGD99549.1;Note=membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB;gbkey=CDS;gene=phoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454992.1;locus_tag=C9F07_08965;partial=true;product=two-component system sensor histidine kinase PhoR;protein_id=TGD99549.1;start_range=.,1;transl_table=11 PYKI01000983.1 Genbank gene 338 1027 . - . ID=gene-C9F07_08970;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=C9F07_08970 PYKI01000983.1 Protein Homology CDS 338 1027 . - 0 ID=cds-TGD99550.1;Parent=gene-C9F07_08970;Dbxref=NCBI_GP:TGD99550.1;Name=TGD99550.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=C9F07_08970;product=phosphate regulon transcriptional regulatory protein PhoB;protein_id=TGD99550.1;transl_table=11 PYKI01000983.1 Genbank gene 1241 2017 . + . ID=gene-C9F07_08975;Name=C9F07_08975;end_range=2017,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08975;partial=true PYKI01000983.1 Protein Homology CDS 1241 2017 . + 0 ID=cds-TGD99551.1;Parent=gene-C9F07_08975;Dbxref=NCBI_GP:TGD99551.1;Name=TGD99551.1;end_range=2017,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=C9F07_08975;partial=true;product=exonuclease subunit SbcD;protein_id=TGD99551.1;transl_table=11 ##sequence-region PYKI01003118.1 1 2017 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003118.1 Genbank region 1 2017 . + . ID=PYKI01003118.1:1..2017;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003118.1 Genbank gene 1 247 . + . ID=gene-C9F07_31185;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=C9F07_31185;partial=true;start_range=.,1 PYKI01003118.1 Protein Homology CDS 1 247 . + 1 ID=cds-TGD39361.1;Parent=gene-C9F07_31185;Dbxref=NCBI_GP:TGD39361.1;Name=TGD39361.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=C9F07_31185;partial=true;product=CTP synthetase;protein_id=TGD39361.1;start_range=.,1;transl_table=11 PYKI01003118.1 Genbank gene 330 1628 . + . ID=gene-C9F07_31190;Name=C9F07_31190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31190 PYKI01003118.1 Protein Homology CDS 330 1628 . + 0 ID=cds-TGD39362.1;Parent=gene-C9F07_31190;Dbxref=NCBI_GP:TGD39362.1;Name=TGD39362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=C9F07_31190;product=phosphopyruvate hydratase;protein_id=TGD39362.1;transl_table=11 PYKI01003118.1 Genbank gene 1764 2017 . + . ID=gene-C9F07_31195;Name=C9F07_31195;end_range=2017,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31195;partial=true PYKI01003118.1 Protein Homology CDS 1764 2017 . + 0 ID=cds-TGD39363.1;Parent=gene-C9F07_31195;Dbxref=NCBI_GP:TGD39363.1;Name=TGD39363.1;end_range=2017,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=C9F07_31195;partial=true;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=TGD39363.1;transl_table=11 ##sequence-region PYKI01003082.1 1 2016 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003082.1 Genbank region 1 2016 . + . ID=PYKI01003082.1:1..2016;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003082.1 Genbank pseudogene 120 1367 . + . ID=gene-C9F07_30865;Name=C9F07_30865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_30865;pseudo=true PYKI01003082.1 Protein Homology CDS 120 1367 . + 0 ID=cds-C9F07_30865;Parent=gene-C9F07_30865;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=C9F07_30865;product=DMSO reductase;pseudo=true;transl_table=11 PYKI01003082.1 Genbank gene 1364 1921 . + . ID=gene-C9F07_30870;Name=C9F07_30870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30870 PYKI01003082.1 Protein Homology CDS 1364 1921 . + 0 ID=cds-TGD40411.1;Parent=gene-C9F07_30870;Dbxref=NCBI_GP:TGD40411.1;Name=TGD40411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=C9F07_30870;product=4Fe-4S dicluster domain-containing protein;protein_id=TGD40411.1;transl_table=11 ##sequence-region PYKI01001179.1 1 2014 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001179.1 Genbank region 1 2014 . + . ID=PYKI01001179.1:1..2014;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001179.1 Genbank gene 1 857 . + . ID=gene-C9F07_11025;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=C9F07_11025;partial=true;start_range=.,1 PYKI01001179.1 Protein Homology CDS 1 857 . + 2 ID=cds-TGD92508.1;Parent=gene-C9F07_11025;Dbxref=NCBI_GP:TGD92508.1;Name=TGD92508.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=C9F07_11025;partial=true;product=HslU--HslV peptidase ATPase subunit;protein_id=TGD92508.1;start_range=.,1;transl_table=11 PYKI01001179.1 Genbank gene 924 1853 . + . ID=gene-C9F07_11030;Name=C9F07_11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11030 PYKI01001179.1 Protein Homology CDS 924 1853 . + 0 ID=cds-TGD92509.1;Parent=gene-C9F07_11030;Dbxref=NCBI_GP:TGD92509.1;Name=TGD92509.1;Note=catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=C9F07_11030;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=TGD92509.1;transl_table=11 PYKI01001179.1 Genbank gene 1946 2014 . + . ID=gene-C9F07_11035;Name=C9F07_11035;end_range=2014,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11035;partial=true PYKI01001179.1 Protein Homology CDS 1946 2014 . + 0 ID=cds-TGD92510.1;Parent=gene-C9F07_11035;Dbxref=NCBI_GP:TGD92510.1;Name=TGD92510.1;end_range=2014,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=C9F07_11035;partial=true;product=ribonuclease E activity regulator RraA;protein_id=TGD92510.1;transl_table=11 ##sequence-region PYKI01002483.1 1 2011 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002483.1 Genbank region 1 2011 . + . ID=PYKI01002483.1:1..2011;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002483.1 Genbank gene 1 647 . + . ID=gene-C9F07_24525;Name=C9F07_24525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24525;partial=true;start_range=.,1 PYKI01002483.1 Protein Homology CDS 1 647 . + 2 ID=cds-TGD50453.1;Parent=gene-C9F07_24525;Dbxref=NCBI_GP:TGD50453.1;Name=TGD50453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=C9F07_24525;partial=true;product=EamA family transporter;protein_id=TGD50453.1;start_range=.,1;transl_table=11 PYKI01002483.1 Genbank gene 697 1332 . - . ID=gene-C9F07_24530;Name=C9F07_24530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24530 PYKI01002483.1 Protein Homology CDS 697 1332 . - 0 ID=cds-TGD50454.1;Parent=gene-C9F07_24530;Dbxref=NCBI_GP:TGD50454.1;Name=TGD50454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458830.1;locus_tag=C9F07_24530;product=hypothetical protein;protein_id=TGD50454.1;transl_table=11 PYKI01002483.1 Genbank pseudogene 1366 1553 . - . ID=gene-C9F07_24535;Name=C9F07_24535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24535;pseudo=true PYKI01002483.1 Protein Homology CDS 1366 1553 . - 0 ID=cds-C9F07_24535;Parent=gene-C9F07_24535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001337177.1;locus_tag=C9F07_24535;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002483.1 Genbank gene 1510 2011 . + . ID=gene-C9F07_24540;Name=C9F07_24540;end_range=2011,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24540;partial=true PYKI01002483.1 Protein Homology CDS 1510 2011 . + 0 ID=cds-TGD50455.1;Parent=gene-C9F07_24540;Dbxref=NCBI_GP:TGD50455.1;Name=TGD50455.1;end_range=2011,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458831.3;locus_tag=C9F07_24540;partial=true;product=hypothetical protein;protein_id=TGD50455.1;transl_table=11 ##sequence-region PYKI01001455.1 1 2009 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001455.1 Genbank region 1 2009 . + . ID=PYKI01001455.1:1..2009;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001455.1 Genbank gene 1 479 . - . ID=gene-C9F07_13795;Name=C9F07_13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13795;partial=true;start_range=.,1 PYKI01001455.1 Protein Homology CDS 1 479 . - 0 ID=cds-TGD82209.1;Parent=gene-C9F07_13795;Dbxref=NCBI_GP:TGD82209.1;Name=TGD82209.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455414.1;locus_tag=C9F07_13795;partial=true;product=arginine ABC transporter substrate-binding protein;protein_id=TGD82209.1;start_range=.,1;transl_table=11 PYKI01001455.1 Genbank gene 716 1384 . - . ID=gene-C9F07_13800;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=C9F07_13800 PYKI01001455.1 Protein Homology CDS 716 1384 . - 0 ID=cds-TGD82210.1;Parent=gene-C9F07_13800;Dbxref=NCBI_GP:TGD82210.1;Name=TGD82210.1;Note=with ArtPQJI acts to transport arginine across the inner membrane;gbkey=CDS;gene=artM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455415.1;locus_tag=C9F07_13800;product=arginine ABC transporter permease ArtM;protein_id=TGD82210.1;transl_table=11 PYKI01001455.1 Genbank pseudogene 1384 1941 . - . ID=gene-C9F07_13805;Name=C9F07_13805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13805;pseudo=true PYKI01001455.1 Protein Homology CDS 1384 1941 . - 0 ID=cds-C9F07_13805;Parent=gene-C9F07_13805;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455416.1;locus_tag=C9F07_13805;product=arginine ABC transporter permease ArtQ;pseudo=true;transl_table=11 ##sequence-region PYKI01003397.1 1 2009 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003397.1 Genbank region 1 2009 . + . ID=PYKI01003397.1:1..2009;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003397.1 Genbank pseudogene 1 703 . - . ID=gene-C9F07_34155;Name=C9F07_34155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34155;pseudo=true PYKI01003397.1 Protein Homology CDS 1 703 . - 0 ID=cds-C9F07_34155;Parent=gene-C9F07_34155;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457028.1;locus_tag=C9F07_34155;product=AI-2E family transporter;pseudo=true;transl_table=11 PYKI01003397.1 Genbank gene 911 2009 . + . ID=gene-C9F07_34160;Name=C9F07_34160;end_range=2009,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34160;partial=true PYKI01003397.1 Protein Homology CDS 911 2009 . + 0 ID=cds-TGD34011.1;Parent=gene-C9F07_34160;Dbxref=NCBI_GP:TGD34011.1;Name=TGD34011.1;end_range=2009,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457029.1;locus_tag=C9F07_34160;partial=true;product=beta-barrel assembly-enhancing protease;protein_id=TGD34011.1;transl_table=11 ##sequence-region PYKI01002916.1 1 2008 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002916.1 Genbank region 1 2008 . + . ID=PYKI01002916.1:1..2008;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002916.1 Genbank gene 1 588 . - . ID=gene-C9F07_29225;Name=C9F07_29225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29225;partial=true;start_range=.,1 PYKI01002916.1 Protein Homology CDS 1 588 . - 0 ID=cds-TGD43398.1;Parent=gene-C9F07_29225;Dbxref=NCBI_GP:TGD43398.1;Name=TGD43398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=C9F07_29225;partial=true;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=TGD43398.1;start_range=.,1;transl_table=11 PYKI01002916.1 Genbank gene 599 1711 . - . ID=gene-C9F07_29230;Name=C9F07_29230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29230 PYKI01002916.1 Protein Homology CDS 599 1711 . - 0 ID=cds-TGD43399.1;Parent=gene-C9F07_29230;Dbxref=NCBI_GP:TGD43399.1;Name=TGD43399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455215.1;locus_tag=C9F07_29230;product=rod shape-determining protein RodA;protein_id=TGD43399.1;transl_table=11 PYKI01002916.1 Genbank pseudogene 1714 1983 . - . ID=gene-C9F07_29235;Name=C9F07_29235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29235;pseudo=true PYKI01002916.1 Protein Homology CDS 1714 1983 . - 0 ID=cds-C9F07_29235;Parent=gene-C9F07_29235;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455216.1;locus_tag=C9F07_29235;product=penicillin-binding protein 2;pseudo=true;transl_table=11 ##sequence-region PYKI01001830.1 1 2007 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001830.1 Genbank region 1 2007 . + . ID=PYKI01001830.1:1..2007;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001830.1 Genbank gene 1 1096 . - . ID=gene-C9F07_17595;Name=C9F07_17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17595;partial=true;start_range=.,1 PYKI01001830.1 Protein Homology CDS 1 1096 . - 0 ID=cds-TGD64278.1;Parent=gene-C9F07_17595;Dbxref=NCBI_GP:TGD64278.1;Name=TGD64278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454616.1;locus_tag=C9F07_17595;partial=true;product=sodium:alanine symporter family protein;protein_id=TGD64278.1;start_range=.,1;transl_table=11 PYKI01001830.1 Genbank gene 1365 2007 . + . ID=gene-C9F07_17600;Name=C9F07_17600;end_range=2007,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17600;partial=true PYKI01001830.1 Protein Homology CDS 1365 2007 . + 0 ID=cds-TGD64279.1;Parent=gene-C9F07_17600;Dbxref=NCBI_GP:TGD64279.1;Name=TGD64279.1;end_range=2007,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454617.1;locus_tag=C9F07_17600;partial=true;product=transaldolase B;protein_id=TGD64279.1;transl_table=11 ##sequence-region PYKI01002456.1 1 4748 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002456.1 Genbank region 1 4748 . + . ID=PYKI01002456.1:1..4748;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002456.1 Genbank gene 1 306 . + . ID=gene-C9F07_24260;Name=C9F07_24260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24260;partial=true;start_range=.,1 PYKI01002456.1 Protein Homology CDS 1 306 . + 0 ID=cds-TGD50818.1;Parent=gene-C9F07_24260;Dbxref=NCBI_GP:TGD50818.1;Name=TGD50818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455704.1;locus_tag=C9F07_24260;partial=true;product=hypothetical protein;protein_id=TGD50818.1;start_range=.,1;transl_table=11 PYKI01002456.1 Genbank gene 380 1015 . - . ID=gene-C9F07_24265;Name=C9F07_24265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24265 PYKI01002456.1 Protein Homology CDS 380 1015 . - 0 ID=cds-TGD50819.1;Parent=gene-C9F07_24265;Dbxref=NCBI_GP:TGD50819.1;Name=TGD50819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455705.1;locus_tag=C9F07_24265;product=TetR family transcriptional regulator;protein_id=TGD50819.1;transl_table=11 PYKI01002456.1 Genbank gene 1257 1514 . + . ID=gene-C9F07_24270;Name=C9F07_24270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24270 PYKI01002456.1 Protein Homology CDS 1257 1514 . + 0 ID=cds-TGD50821.1;Parent=gene-C9F07_24270;Dbxref=NCBI_GP:TGD50821.1;Name=TGD50821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=C9F07_24270;product=DUF1471 domain-containing protein;protein_id=TGD50821.1;transl_table=11 PYKI01002456.1 Genbank gene 1611 2576 . - . ID=gene-C9F07_24275;Name=C9F07_24275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24275 PYKI01002456.1 Protein Homology CDS 1611 2576 . - 0 ID=cds-TGD50820.1;Parent=gene-C9F07_24275;Dbxref=NCBI_GP:TGD50820.1;Name=TGD50820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=C9F07_24275;product=LysM peptidoglycan-binding domain-containing protein;protein_id=TGD50820.1;transl_table=11 PYKI01002456.1 Genbank gene 2724 4748 . - . ID=gene-C9F07_24280;Name=C9F07_24280;end_range=4748,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24280;partial=true PYKI01002456.1 Protein Homology CDS 2724 4748 . - 0 ID=cds-TGD50822.1;Parent=gene-C9F07_24280;Dbxref=NCBI_GP:TGD50822.1;Name=TGD50822.1;end_range=4748,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=C9F07_24280;partial=true;product=transcription-repair coupling factor;protein_id=TGD50822.1;transl_table=11 ##sequence-region PYKI01002378.1 1 2001 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002378.1 Genbank region 1 2001 . + . ID=PYKI01002378.1:1..2001;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002378.1 Genbank gene 1 147 . - . ID=gene-C9F07_23380;Name=C9F07_23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23380;partial=true;start_range=.,1 PYKI01002378.1 Protein Homology CDS 1 147 . - 0 ID=cds-TGD52503.1;Parent=gene-C9F07_23380;Dbxref=NCBI_GP:TGD52503.1;Name=TGD52503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455416.1;locus_tag=C9F07_23380;partial=true;product=arginine ABC transporter permease;protein_id=TGD52503.1;start_range=.,1;transl_table=11 PYKI01002378.1 Genbank gene 154 885 . - . ID=gene-C9F07_23385;Name=C9F07_23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23385 PYKI01002378.1 Protein Homology CDS 154 885 . - 0 ID=cds-TGD52500.1;Parent=gene-C9F07_23385;Dbxref=NCBI_GP:TGD52500.1;Name=TGD52500.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455417.1;locus_tag=C9F07_23385;product=arginine ABC transporter substrate-binding protein;protein_id=TGD52500.1;transl_table=11 PYKI01002378.1 Genbank gene 903 1631 . - . ID=gene-C9F07_23390;Name=C9F07_23390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23390 PYKI01002378.1 Protein Homology CDS 903 1631 . - 0 ID=cds-TGD52501.1;Parent=gene-C9F07_23390;Dbxref=NCBI_GP:TGD52501.1;Name=TGD52501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=C9F07_23390;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=TGD52501.1;transl_table=11 PYKI01002378.1 Genbank gene 1860 2001 . - . ID=gene-C9F07_23395;Name=C9F07_23395;end_range=2001,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23395;partial=true PYKI01002378.1 Protein Homology CDS 1860 2001 . - 1 ID=cds-TGD52502.1;Parent=gene-C9F07_23395;Dbxref=NCBI_GP:TGD52502.1;Name=TGD52502.1;Note=induced during stationary phase and by acivicin (a glutamine analog)%3B regulated by Lrp and RpoS;end_range=2001,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455419.1;locus_tag=C9F07_23395;partial=true;product=lipoprotein;protein_id=TGD52502.1;transl_table=11 ##sequence-region PYKI01002795.1 1 1998 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002795.1 Genbank region 1 1998 . + . ID=PYKI01002795.1:1..1998;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002795.1 Genbank gene 1 1199 . + . ID=gene-C9F07_27930;Name=C9F07_27930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27930;partial=true;start_range=.,1 PYKI01002795.1 Protein Homology CDS 1 1199 . + 2 ID=cds-TGD45962.1;Parent=gene-C9F07_27930;Dbxref=NCBI_GP:TGD45962.1;Name=TGD45962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=C9F07_27930;partial=true;product=Trk system potassium transporter TrkA;protein_id=TGD45962.1;start_range=.,1;transl_table=11 PYKI01002795.1 Genbank gene 1341 1754 . + . ID=gene-C9F07_27935;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=C9F07_27935 PYKI01002795.1 Protein Homology CDS 1341 1754 . + 0 ID=cds-TGD45963.1;Parent=gene-C9F07_27935;Dbxref=NCBI_GP:TGD45963.1;Name=TGD45963.1;Note=forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458489.1;locus_tag=C9F07_27935;product=large conductance mechanosensitive channel protein MscL;protein_id=TGD45963.1;transl_table=11 PYKI01002795.1 Genbank gene 1690 1959 . - . ID=gene-C9F07_27940;Name=C9F07_27940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27940 PYKI01002795.1 Protein Homology CDS 1690 1959 . - 0 ID=cds-TGD45964.1;Parent=gene-C9F07_27940;Dbxref=NCBI_GP:TGD45964.1;Name=TGD45964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462315.1;locus_tag=C9F07_27940;product=ribosome alternative rescue factor ArfA;protein_id=TGD45964.1;transl_table=11 ##sequence-region PYKI01003455.1 1 1995 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003455.1 Genbank region 1 1995 . + . ID=PYKI01003455.1:1..1995;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003455.1 Genbank gene 3 485 . + . ID=gene-C9F07_34740;Name=C9F07_34740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34740 PYKI01003455.1 Protein Homology CDS 3 485 . + 0 ID=cds-TGD33374.1;Parent=gene-C9F07_34740;Dbxref=NCBI_GP:TGD33374.1;Name=TGD33374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000244733.1;locus_tag=C9F07_34740;product=fimbrial protein;protein_id=TGD33374.1;transl_table=11 PYKI01003455.1 Genbank gene 561 1238 . + . ID=gene-C9F07_34745;Name=C9F07_34745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34745 PYKI01003455.1 Protein Homology CDS 561 1238 . + 0 ID=cds-TGD33375.1;Parent=gene-C9F07_34745;Dbxref=NCBI_GP:TGD33375.1;Name=TGD33375.1;Note=binds with fimbrial subunit LpfA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001046428.1;locus_tag=C9F07_34745;product=long polar fimbrial chaperone LpfB;protein_id=TGD33375.1;transl_table=11 PYKI01003455.1 Genbank gene 1262 1995 . + . ID=gene-C9F07_34750;Name=C9F07_34750;end_range=1995,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34750;partial=true PYKI01003455.1 Protein Homology CDS 1262 1995 . + 0 ID=cds-TGD33376.1;Parent=gene-C9F07_34750;Dbxref=NCBI_GP:TGD33376.1;Name=TGD33376.1;end_range=1995,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990584.1;locus_tag=C9F07_34750;partial=true;product=fimbrial assembly protein;protein_id=TGD33376.1;transl_table=11 ##sequence-region PYKI01001119.1 1 1993 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001119.1 Genbank region 1 1993 . + . ID=PYKI01001119.1:1..1993;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001119.1 Genbank gene 18 1340 . - . ID=gene-C9F07_10430;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=C9F07_10430 PYKI01001119.1 Protein Homology CDS 18 1340 . - 0 ID=cds-TGD94874.1;Parent=gene-C9F07_10430;Dbxref=NCBI_GP:TGD94874.1;Name=TGD94874.1;gbkey=CDS;gene=glgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=C9F07_10430;product=glucose-1-phosphate adenylyltransferase;protein_id=TGD94874.1;transl_table=11 PYKI01001119.1 Genbank gene 1355 1993 . - . ID=gene-C9F07_10435;Name=C9F07_10435;end_range=1993,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10435;partial=true PYKI01001119.1 Protein Homology CDS 1355 1993 . - 0 ID=cds-TGD94875.1;Parent=gene-C9F07_10435;Dbxref=NCBI_GP:TGD94875.1;Name=TGD94875.1;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen;end_range=1993,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=C9F07_10435;partial=true;product=glycogen debranching enzyme;protein_id=TGD94875.1;transl_table=11 ##sequence-region PYKI01000640.1 1 1992 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000640.1 Genbank region 1 1992 . + . ID=PYKI01000640.1:1..1992;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000640.1 Genbank gene 1 91 . + . ID=gene-C9F07_05530;Name=C9F07_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05530;partial=true;start_range=.,1 PYKI01000640.1 Protein Homology CDS 1 91 . + 1 ID=cds-TGE12817.1;Parent=gene-C9F07_05530;Dbxref=NCBI_GP:TGE12817.1;Name=TGE12817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457119.1;locus_tag=C9F07_05530;partial=true;product=helicase;protein_id=TGE12817.1;start_range=.,1;transl_table=11 PYKI01000640.1 Genbank gene 109 1008 . - . ID=gene-C9F07_05535;Name=C9F07_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05535 PYKI01000640.1 Protein Homology CDS 109 1008 . - 0 ID=cds-TGE12820.1;Parent=gene-C9F07_05535;Dbxref=NCBI_GP:TGE12820.1;Name=TGE12820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=C9F07_05535;product=LysR family transcriptional regulator;protein_id=TGE12820.1;transl_table=11 PYKI01000640.1 Genbank gene 1111 1698 . + . ID=gene-C9F07_05540;Name=C9F07_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05540 PYKI01000640.1 Protein Homology CDS 1111 1698 . + 0 ID=cds-TGE12818.1;Parent=gene-C9F07_05540;Dbxref=NCBI_GP:TGE12818.1;Name=TGE12818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=C9F07_05540;product=cysteine/O-acetylserine efflux protein;protein_id=TGE12818.1;transl_table=11 PYKI01000640.1 Genbank gene 1760 1992 . - . ID=gene-C9F07_05545;Name=C9F07_05545;end_range=1992,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05545;partial=true PYKI01000640.1 Protein Homology CDS 1760 1992 . - 2 ID=cds-TGE12819.1;Parent=gene-C9F07_05545;Dbxref=NCBI_GP:TGE12819.1;Name=TGE12819.1;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;end_range=1992,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=C9F07_05545;partial=true;product=autonomous glycyl radical cofactor GrcA;protein_id=TGE12819.1;transl_table=11 ##sequence-region PYKI01001389.1 1 1988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001389.1 Genbank region 1 1988 . + . ID=PYKI01001389.1:1..1988;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001389.1 Genbank gene 72 263 . - . ID=gene-C9F07_13080;Name=C9F07_13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13080 PYKI01001389.1 Protein Homology CDS 72 263 . - 0 ID=cds-TGD84327.1;Parent=gene-C9F07_13080;Dbxref=NCBI_GP:TGD84327.1;Name=TGD84327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219570.1;locus_tag=C9F07_13080;product=hypothetical protein;protein_id=TGD84327.1;transl_table=11 PYKI01001389.1 Genbank gene 255 989 . + . ID=gene-C9F07_13085;Name=C9F07_13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13085 PYKI01001389.1 Protein Homology CDS 255 989 . + 0 ID=cds-TGD84328.1;Parent=gene-C9F07_13085;Dbxref=NCBI_GP:TGD84328.1;Name=TGD84328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=C9F07_13085;product=aspartate/glutamate racemase family protein;protein_id=TGD84328.1;transl_table=11 PYKI01001389.1 Genbank gene 995 1903 . - . ID=gene-C9F07_13090;Name=C9F07_13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13090 PYKI01001389.1 Protein Homology CDS 995 1903 . - 0 ID=cds-TGD84329.1;Parent=gene-C9F07_13090;Dbxref=NCBI_GP:TGD84329.1;Name=TGD84329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458936.1;locus_tag=C9F07_13090;product=LysR family transcriptional regulator;protein_id=TGD84329.1;transl_table=11 ##sequence-region PYKI01002762.1 1 1987 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002762.1 Genbank region 1 1987 . + . ID=PYKI01002762.1:1..1987;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002762.1 Genbank gene 1 763 . + . ID=gene-C9F07_27585;Name=C9F07_27585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27585;partial=true;start_range=.,1 PYKI01002762.1 Protein Homology CDS 1 763 . + 1 ID=cds-TGD46653.1;Parent=gene-C9F07_27585;Dbxref=NCBI_GP:TGD46653.1;Name=TGD46653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=C9F07_27585;partial=true;product=xylulose 5-phosphate 3-epimerase;protein_id=TGD46653.1;start_range=.,1;transl_table=11 PYKI01002762.1 Genbank gene 763 1449 . + . ID=gene-C9F07_27590;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=C9F07_27590 PYKI01002762.1 Protein Homology CDS 763 1449 . + 0 ID=cds-TGD46654.1;Parent=gene-C9F07_27590;Dbxref=NCBI_GP:TGD46654.1;Name=TGD46654.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458822.1;locus_tag=C9F07_27590;product=L-ribulose-5-phosphate 4-epimerase;protein_id=TGD46654.1;transl_table=11 PYKI01002762.1 Genbank gene 1537 1987 . + . ID=gene-C9F07_27595;Name=C9F07_27595;end_range=1987,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27595;partial=true PYKI01002762.1 Protein Homology CDS 1537 1987 . + 0 ID=cds-TGD46655.1;Parent=gene-C9F07_27595;Dbxref=NCBI_GP:TGD46655.1;Name=TGD46655.1;end_range=1987,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006911310.1;locus_tag=C9F07_27595;partial=true;product=DUF1440 domain-containing protein;protein_id=TGD46655.1;transl_table=11 ##sequence-region PYKI01001084.1 1 1986 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001084.1 Genbank region 1 1986 . + . ID=PYKI01001084.1:1..1986;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001084.1 Genbank gene 34 918 . - . ID=gene-C9F07_10100;Name=C9F07_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10100 PYKI01001084.1 Protein Homology CDS 34 918 . - 0 ID=cds-TGD95653.1;Parent=gene-C9F07_10100;Dbxref=NCBI_GP:TGD95653.1;Name=TGD95653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=C9F07_10100;product=NAD(P)-dependent dehydrogenase;protein_id=TGD95653.1;transl_table=11 PYKI01001084.1 Genbank gene 1042 1446 . - . ID=gene-C9F07_10105;Name=C9F07_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10105 PYKI01001084.1 Protein Homology CDS 1042 1446 . - 0 ID=cds-TGD95654.1;Parent=gene-C9F07_10105;Dbxref=NCBI_GP:TGD95654.1;Name=TGD95654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=C9F07_10105;product=cytoplasmic protein;protein_id=TGD95654.1;transl_table=11 PYKI01001084.1 Genbank gene 1433 1843 . - . ID=gene-C9F07_10110;Name=C9F07_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10110 PYKI01001084.1 Protein Homology CDS 1433 1843 . - 0 ID=cds-TGD95655.1;Parent=gene-C9F07_10110;Dbxref=NCBI_GP:TGD95655.1;Name=TGD95655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=C9F07_10110;product=hypothetical protein;protein_id=TGD95655.1;transl_table=11 ##sequence-region PYKI01002071.1 1 1980 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002071.1 Genbank region 1 1980 . + . ID=PYKI01002071.1:1..1980;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002071.1 Genbank gene 1 385 . + . ID=gene-C9F07_20070;Name=C9F07_20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20070;partial=true;start_range=.,1 PYKI01002071.1 Protein Homology CDS 1 385 . + 1 ID=cds-TGD59331.1;Parent=gene-C9F07_20070;Dbxref=NCBI_GP:TGD59331.1;Name=TGD59331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=C9F07_20070;partial=true;product=beta-glucosidase;protein_id=TGD59331.1;start_range=.,1;transl_table=11 PYKI01002071.1 Genbank gene 433 1326 . - . ID=gene-C9F07_20075;Name=C9F07_20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20075 PYKI01002071.1 Protein Homology CDS 433 1326 . - 0 ID=cds-TGD59332.1;Parent=gene-C9F07_20075;Dbxref=NCBI_GP:TGD59332.1;Name=TGD59332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=C9F07_20075;product=transporter;protein_id=TGD59332.1;transl_table=11 PYKI01002071.1 Genbank gene 1410 1556 . - . ID=gene-C9F07_20080;Name=C9F07_20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20080 PYKI01002071.1 Protein Homology CDS 1410 1556 . - 0 ID=cds-TGD59333.1;Parent=gene-C9F07_20080;Dbxref=NCBI_GP:TGD59333.1;Name=TGD59333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751796.1;locus_tag=C9F07_20080;product=immunoglobulin;protein_id=TGD59333.1;transl_table=11 PYKI01002071.1 Genbank gene 1782 1980 . - . ID=gene-C9F07_20085;Name=C9F07_20085;end_range=1980,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20085;partial=true PYKI01002071.1 Protein Homology CDS 1782 1980 . - 1 ID=cds-TGD59334.1;Parent=gene-C9F07_20085;Dbxref=NCBI_GP:TGD59334.1;Name=TGD59334.1;end_range=1980,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457451.1;locus_tag=C9F07_20085;partial=true;product=glycine dehydrogenase;protein_id=TGD59334.1;transl_table=11 ##sequence-region PYKI01003196.1 1 4724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003196.1 Genbank region 1 4724 . + . ID=PYKI01003196.1:1..4724;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003196.1 Genbank gene 156 1718 . + . ID=gene-C9F07_32095;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=C9F07_32095 PYKI01003196.1 Protein Homology CDS 156 1718 . + 0 ID=cds-TGD37398.1;Parent=gene-C9F07_32095;Dbxref=NCBI_GP:TGD37398.1;Name=TGD37398.1;gbkey=CDS;gene=hpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=C9F07_32095;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=TGD37398.1;transl_table=11 PYKI01003196.1 Genbank gene 1736 2248 . + . ID=gene-C9F07_32100;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=C9F07_32100 PYKI01003196.1 Protein Homology CDS 1736 2248 . + 0 ID=cds-TGD37399.1;Parent=gene-C9F07_32100;Dbxref=NCBI_GP:TGD37399.1;Name=TGD37399.1;Note=catalyzes the reduction of MN%2C FAD and riboflavin by NADH;gbkey=CDS;gene=hpaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=C9F07_32100;product=4-hydroxyphenylacetate 3-monooxygenase reductase component;protein_id=TGD37399.1;transl_table=11 PYKI01003196.1 Genbank gene 2245 2427 . - . ID=gene-C9F07_32105;Name=C9F07_32105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32105 PYKI01003196.1 Protein Homology CDS 2245 2427 . - 0 ID=cds-TGD37400.1;Parent=gene-C9F07_32105;Dbxref=NCBI_GP:TGD37400.1;Name=TGD37400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742094.1;locus_tag=C9F07_32105;product=hypothetical protein;protein_id=TGD37400.1;transl_table=11 PYKI01003196.1 Genbank pseudogene 2367 2565 . - . ID=gene-C9F07_32110;Name=C9F07_32110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32110;pseudo=true PYKI01003196.1 Protein Homology CDS 2367 2565 . - 0 ID=cds-C9F07_32110;Parent=gene-C9F07_32110;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344272.1;locus_tag=C9F07_32110;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01003196.1 Genbank gene 2581 2991 . - . ID=gene-C9F07_32115;Name=C9F07_32115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32115 PYKI01003196.1 Protein Homology CDS 2581 2991 . - 0 ID=cds-TGD37401.1;Parent=gene-C9F07_32115;Dbxref=NCBI_GP:TGD37401.1;Name=TGD37401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455594.1;locus_tag=C9F07_32115;product=hydroxyisourate hydrolase;protein_id=TGD37401.1;transl_table=11 PYKI01003196.1 Genbank gene 3061 3807 . + . ID=gene-C9F07_32120;Name=C9F07_32120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32120 PYKI01003196.1 Protein Homology CDS 3061 3807 . + 0 ID=cds-TGD37402.1;Parent=gene-C9F07_32120;Dbxref=NCBI_GP:TGD37402.1;Name=TGD37402.1;Note=induced by CusR in the presence of copper%3B YedW induces the expression of the upstream gene yedV (encoding a sensor kinase) as well as yedW%3B yedVW is one of four copper regulons found in E. coli%3B part of the copper homeostasis mechanism%3B confers resistance to copper and several drugs when induced;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460069.3;locus_tag=C9F07_32120;product=DNA-binding response regulator;protein_id=TGD37402.1;transl_table=11 PYKI01003196.1 Genbank gene 3800 4724 . + . ID=gene-C9F07_32125;Name=C9F07_32125;end_range=4724,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32125;partial=true PYKI01003196.1 Protein Homology CDS 3800 4724 . + 0 ID=cds-TGD37403.1;Parent=gene-C9F07_32125;Dbxref=NCBI_GP:TGD37403.1;Name=TGD37403.1;end_range=4724,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455592.1;locus_tag=C9F07_32125;partial=true;product=two-component sensor histidine kinase;protein_id=TGD37403.1;transl_table=11 ##sequence-region PYKI01003550.1 1 1973 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003550.1 Genbank region 1 1973 . + . ID=PYKI01003550.1:1..1973;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003550.1 Genbank pseudogene 64 978 . - . ID=gene-C9F07_35845;Name=C9F07_35845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35845;pseudo=true PYKI01003550.1 Protein Homology CDS 64 978 . - 0 ID=cds-C9F07_35845;Parent=gene-C9F07_35845;Note=Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=C9F07_35845;product=transcriptional regulator MalT;pseudo=true;transl_table=11 PYKI01003550.1 Genbank gene 1572 1973 . + . ID=gene-C9F07_35850;Name=C9F07_35850;end_range=1973,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35850;partial=true PYKI01003550.1 Protein Homology CDS 1572 1973 . + 0 ID=cds-TGD30816.1;Parent=gene-C9F07_35850;Dbxref=NCBI_GP:TGD30816.1;Name=TGD30816.1;end_range=1973,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458390.1;locus_tag=C9F07_35850;partial=true;product=maltodextrin phosphorylase;protein_id=TGD30816.1;transl_table=11 ##sequence-region PYKI01000077.1 1 1971 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000077.1 Genbank region 1 1971 . + . ID=PYKI01000077.1:1..1971;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000077.1 Genbank gene 1 339 . + . ID=gene-C9F07_00475;Name=C9F07_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00475;partial=true;start_range=.,1 PYKI01000077.1 Protein Homology CDS 1 339 . + 0 ID=cds-TGE30162.1;Parent=gene-C9F07_00475;Dbxref=NCBI_GP:TGE30162.1;Name=TGE30162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459831.1;locus_tag=C9F07_00475;partial=true;product=hypothetical protein;protein_id=TGE30162.1;start_range=.,1;transl_table=11 PYKI01000077.1 Genbank gene 257 1111 . + . ID=gene-C9F07_00480;Name=C9F07_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00480 PYKI01000077.1 Protein Homology CDS 257 1111 . + 0 ID=cds-TGE30160.1;Parent=gene-C9F07_00480;Dbxref=NCBI_GP:TGE30160.1;Name=TGE30160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459832.3;locus_tag=C9F07_00480;product=electron transfer flavoprotein subunit beta;protein_id=TGE30160.1;transl_table=11 PYKI01000077.1 Genbank gene 1122 1971 . + . ID=gene-C9F07_00485;Name=C9F07_00485;end_range=1971,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00485;partial=true PYKI01000077.1 Protein Homology CDS 1122 1971 . + 0 ID=cds-TGE30161.1;Parent=gene-C9F07_00485;Dbxref=NCBI_GP:TGE30161.1;Name=TGE30161.1;end_range=1971,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459833.1;locus_tag=C9F07_00485;partial=true;product=electron transfer flavoprotein subunit alpha;protein_id=TGE30161.1;transl_table=11 ##sequence-region PYKI01002368.1 1 1971 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002368.1 Genbank region 1 1971 . + . ID=PYKI01002368.1:1..1971;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002368.1 Genbank gene 116 472 . - . ID=gene-C9F07_23285;Name=C9F07_23285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23285 PYKI01002368.1 Protein Homology CDS 116 472 . - 0 ID=cds-TGD52832.1;Parent=gene-C9F07_23285;Dbxref=NCBI_GP:TGD52832.1;Name=TGD52832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017051447.1;locus_tag=C9F07_23285;product=30S ribosomal protein S13;protein_id=TGD52832.1;transl_table=11 PYKI01002368.1 Genbank pseudogene 619 735 . - . ID=gene-C9F07_23290;Name=C9F07_23290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23290;pseudo=true PYKI01002368.1 Protein Homology CDS 619 735 . - 0 ID=cds-C9F07_23290;Parent=gene-C9F07_23290;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=C9F07_23290;product=50S ribosomal protein L36;pseudo=true;transl_table=11 PYKI01002368.1 Genbank gene 767 1971 . - . ID=gene-C9F07_23295;Name=C9F07_23295;end_range=1971,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23295;partial=true PYKI01002368.1 Protein Homology CDS 767 1971 . - 2 ID=cds-TGD52833.1;Parent=gene-C9F07_23295;Dbxref=NCBI_GP:TGD52833.1;Name=TGD52833.1;end_range=1971,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=C9F07_23295;partial=true;product=preprotein translocase subunit SecY;protein_id=TGD52833.1;transl_table=11 ##sequence-region PYKI01000128.1 1 1970 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000128.1 Genbank region 1 1970 . + . ID=PYKI01000128.1:1..1970;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000128.1 Genbank gene 1 590 . + . ID=gene-C9F07_00865;Name=C9F07_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00865;partial=true;start_range=.,1 PYKI01000128.1 Protein Homology CDS 1 590 . + 2 ID=cds-TGE30096.1;Parent=gene-C9F07_00865;Dbxref=NCBI_GP:TGE30096.1;Name=TGE30096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=C9F07_00865;partial=true;product=MBL fold metallo-hydrolase;protein_id=TGE30096.1;start_range=.,1;transl_table=11 PYKI01000128.1 Genbank gene 678 1040 . - . ID=gene-C9F07_00870;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=C9F07_00870 PYKI01000128.1 Protein Homology CDS 678 1040 . - 0 ID=cds-TGE30097.1;Parent=gene-C9F07_00870;Dbxref=NCBI_GP:TGE30097.1;Name=TGE30097.1;gbkey=CDS;gene=queD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434567.1;locus_tag=C9F07_00870;product=6-carboxytetrahydropterin synthase QueD;protein_id=TGE30097.1;transl_table=11 PYKI01000128.1 Genbank gene 969 1139 . + . ID=gene-C9F07_00875;Name=C9F07_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00875 PYKI01000128.1 Protein Homology CDS 969 1139 . + 0 ID=cds-TGE30098.1;Parent=gene-C9F07_00875;Dbxref=NCBI_GP:TGE30098.1;Name=TGE30098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219186.1;locus_tag=C9F07_00875;product=6-pyruvoyl tetrahydrobiopterin synthase;protein_id=TGE30098.1;transl_table=11 PYKI01000128.1 Genbank gene 1464 1970 . + . ID=gene-C9F07_00880;Name=cysJ;end_range=1970,.;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=C9F07_00880;partial=true PYKI01000128.1 Protein Homology CDS 1464 1970 . + 0 ID=cds-TGE30099.1;Parent=gene-C9F07_00880;Dbxref=NCBI_GP:TGE30099.1;Name=TGE30099.1;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;end_range=1970,.;gbkey=CDS;gene=cysJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=C9F07_00880;partial=true;product=sulfite reductase subunit alpha;protein_id=TGE30099.1;transl_table=11 ##sequence-region PYKI01003438.1 1 1969 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003438.1 Genbank region 1 1969 . + . ID=PYKI01003438.1:1..1969;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003438.1 Genbank gene 1 145 . - . ID=gene-C9F07_34575;Name=C9F07_34575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34575;partial=true;start_range=.,1 PYKI01003438.1 Protein Homology CDS 1 145 . - 0 ID=cds-TGD33451.1;Parent=gene-C9F07_34575;Dbxref=NCBI_GP:TGD33451.1;Name=TGD33451.1;Note=catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456843.1;locus_tag=C9F07_34575;partial=true;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=TGD33451.1;start_range=.,1;transl_table=11 PYKI01003438.1 Genbank gene 142 1969 . - . ID=gene-C9F07_34580;Name=C9F07_34580;end_range=1969,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34580;partial=true PYKI01003438.1 Protein Homology CDS 142 1969 . - 1 ID=cds-TGD33452.1;Parent=gene-C9F07_34580;Dbxref=NCBI_GP:TGD33452.1;Name=TGD33452.1;Note=Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains;end_range=1969,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456842.1;locus_tag=C9F07_34580;partial=true;product=bifunctional UDP-glucuronic acid oxidase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase;protein_id=TGD33452.1;transl_table=11 ##sequence-region PYKI01000718.1 1 1969 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000718.1 Genbank region 1 1969 . + . ID=PYKI01000718.1:1..1969;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000718.1 Genbank gene 1 1969 . - . ID=gene-C9F07_06290;Name=metL;end_range=1969,.;gbkey=Gene;gene=metL;gene_biotype=protein_coding;gene_synonym=metM;locus_tag=C9F07_06290;partial=true;start_range=.,1 PYKI01000718.1 Protein Homology CDS 1 1969 . - 2 ID=cds-TGE11212.1;Parent=gene-C9F07_06290;Dbxref=NCBI_GP:TGE11212.1;Name=TGE11212.1;Note=multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;end_range=1969,.;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=C9F07_06290;partial=true;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=TGE11212.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001197.1 1 1968 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001197.1 Genbank region 1 1968 . + . ID=PYKI01001197.1:1..1968;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001197.1 Genbank gene 1 359 . - . ID=gene-C9F07_11200;Name=C9F07_11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11200;partial=true;start_range=.,1 PYKI01001197.1 Protein Homology CDS 1 359 . - 0 ID=cds-TGD91758.1;Parent=gene-C9F07_11200;Dbxref=NCBI_GP:TGD91758.1;Name=TGD91758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=C9F07_11200;partial=true;product=SAM-dependent methyltransferase;protein_id=TGD91758.1;start_range=.,1;transl_table=11 PYKI01001197.1 Genbank gene 437 1237 . - . ID=gene-C9F07_11205;Name=C9F07_11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11205 PYKI01001197.1 Protein Homology CDS 437 1237 . - 0 ID=cds-TGD91759.1;Parent=gene-C9F07_11205;Dbxref=NCBI_GP:TGD91759.1;Name=TGD91759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308232.1;locus_tag=C9F07_11205;product=endonuclease/exonuclease/phosphatase family protein;protein_id=TGD91759.1;transl_table=11 PYKI01001197.1 Genbank gene 1369 1968 . - . ID=gene-C9F07_11210;Name=C9F07_11210;end_range=1968,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11210;partial=true PYKI01001197.1 Protein Homology CDS 1369 1968 . - 0 ID=cds-TGD91760.1;Parent=gene-C9F07_11210;Dbxref=NCBI_GP:TGD91760.1;Name=TGD91760.1;end_range=1968,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454860.1;locus_tag=C9F07_11210;partial=true;product=MFS sugar transporter;protein_id=TGD91760.1;transl_table=11 ##sequence-region PYKI01001133.1 1 1966 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001133.1 Genbank region 1 1966 . + . ID=PYKI01001133.1:1..1966;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001133.1 Genbank gene 1 494 . + . ID=gene-C9F07_10560;Name=C9F07_10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10560;partial=true;start_range=.,1 PYKI01001133.1 Protein Homology CDS 1 494 . + 2 ID=cds-TGD94643.1;Parent=gene-C9F07_10560;Dbxref=NCBI_GP:TGD94643.1;Name=TGD94643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455374.1;locus_tag=C9F07_10560;partial=true;product=hypothetical protein;protein_id=TGD94643.1;start_range=.,1;transl_table=11 PYKI01001133.1 Genbank gene 616 1881 . - . ID=gene-C9F07_10565;Name=C9F07_10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10565 PYKI01001133.1 Protein Homology CDS 616 1881 . - 0 ID=cds-TGD94644.1;Parent=gene-C9F07_10565;Dbxref=NCBI_GP:TGD94644.1;Name=TGD94644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=C9F07_10565;product=DUF1479 domain-containing protein;protein_id=TGD94644.1;transl_table=11 ##sequence-region PYKI01001227.1 1 1965 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001227.1 Genbank region 1 1965 . + . ID=PYKI01001227.1:1..1965;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001227.1 Genbank gene 1 251 . + . ID=gene-C9F07_11480;Name=C9F07_11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11480;partial=true;start_range=.,1 PYKI01001227.1 Protein Homology CDS 1 251 . + 2 ID=cds-TGD91090.1;Parent=gene-C9F07_11480;Dbxref=NCBI_GP:TGD91090.1;Name=TGD91090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456885.1;locus_tag=C9F07_11480;partial=true;product=PTS mannitol transporter subunit IIB;protein_id=TGD91090.1;start_range=.,1;transl_table=11 PYKI01001227.1 Genbank gene 272 1663 . + . ID=gene-C9F07_11485;Name=C9F07_11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11485 PYKI01001227.1 Protein Homology CDS 272 1663 . + 0 ID=cds-TGD91091.1;Parent=gene-C9F07_11485;Dbxref=NCBI_GP:TGD91091.1;Name=TGD91091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=C9F07_11485;product=PTS ascorbate transporter subunit IIC;protein_id=TGD91091.1;transl_table=11 PYKI01001227.1 Genbank pseudogene 1660 1893 . + . ID=gene-C9F07_11490;Name=C9F07_11490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_11490;pseudo=true PYKI01001227.1 Protein Homology CDS 1660 1893 . + 0 ID=cds-C9F07_11490;Parent=gene-C9F07_11490;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456883.1;locus_tag=C9F07_11490;product=transketolase;pseudo=true;transl_table=11 ##sequence-region PYKI01002688.1 1 4709 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002688.1 Genbank region 1 4709 . + . ID=PYKI01002688.1:1..4709;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002688.1 Genbank pseudogene 1 2247 . - . ID=gene-C9F07_26755;Name=C9F07_26755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26755;pseudo=true PYKI01002688.1 Protein Homology CDS 1 2247 . - 0 ID=cds-C9F07_26755;Parent=gene-C9F07_26755;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461865.1;locus_tag=C9F07_26755;product=CRISPR-associated helicase/endonuclease Cas3;pseudo=true;transl_table=11 PYKI01002688.1 Genbank gene 2691 3644 . + . ID=gene-C9F07_26760;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=C9F07_26760 PYKI01002688.1 Protein Homology CDS 2691 3644 . + 0 ID=cds-TGD48422.1;Parent=gene-C9F07_26760;Dbxref=NCBI_GP:TGD48422.1;Name=TGD48422.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457334.1;locus_tag=C9F07_26760;product=SPI-1 type III secretion system effector SopD;protein_id=TGD48422.1;transl_table=11 PYKI01002688.1 Genbank gene 3732 4466 . - . ID=gene-C9F07_26765;Name=C9F07_26765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26765 PYKI01002688.1 Protein Homology CDS 3732 4466 . - 0 ID=cds-TGD48421.1;Parent=gene-C9F07_26765;Dbxref=NCBI_GP:TGD48421.1;Name=TGD48421.1;Note=catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457335.1;locus_tag=C9F07_26765;product=phosphoadenosine phosphosulfate reductase;protein_id=TGD48421.1;transl_table=11 PYKI01002688.1 Genbank pseudogene 4393 4585 . + . ID=gene-C9F07_26770;Name=C9F07_26770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26770;pseudo=true PYKI01002688.1 Protein Homology CDS 4393 4585 . + 0 ID=cds-C9F07_26770;Parent=gene-C9F07_26770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747506.1;locus_tag=C9F07_26770;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002688.1 Genbank gene 4542 4709 . - . ID=gene-C9F07_26775;Name=C9F07_26775;end_range=4709,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26775;partial=true PYKI01002688.1 Protein Homology CDS 4542 4709 . - 0 ID=cds-TGD48423.1;Parent=gene-C9F07_26775;Dbxref=NCBI_GP:TGD48423.1;Name=TGD48423.1;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide;end_range=4709,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457336.1;locus_tag=C9F07_26775;partial=true;product=sulfite reductase subunit beta;protein_id=TGD48423.1;transl_table=11 ##sequence-region PYKI01000590.1 1 1965 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000590.1 Genbank region 1 1965 . + . ID=PYKI01000590.1:1..1965;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000590.1 Genbank gene 118 1524 . + . ID=gene-C9F07_05045;Name=C9F07_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05045 PYKI01000590.1 Protein Homology CDS 118 1524 . + 0 ID=cds-TGE14200.1;Parent=gene-C9F07_05045;Dbxref=NCBI_GP:TGE14200.1;Name=TGE14200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=C9F07_05045;product=MFS transporter;protein_id=TGE14200.1;transl_table=11 PYKI01000590.1 Genbank pseudogene 1524 1934 . + . ID=gene-C9F07_05050;Name=C9F07_05050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05050;pseudo=true PYKI01000590.1 Protein Homology CDS 1524 1934 . + 0 ID=cds-C9F07_05050;Parent=gene-C9F07_05050;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454762.1;locus_tag=C9F07_05050;product=alpha-N-arabinofuranosidase;pseudo=true;transl_table=11 ##sequence-region PYKI01003209.1 1 1965 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003209.1 Genbank region 1 1965 . + . ID=PYKI01003209.1:1..1965;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003209.1 Genbank gene 1 736 . - . ID=gene-C9F07_32275;Name=C9F07_32275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32275;partial=true;start_range=.,1 PYKI01003209.1 Protein Homology CDS 1 736 . - 0 ID=cds-TGD37084.1;Parent=gene-C9F07_32275;Dbxref=NCBI_GP:TGD37084.1;Name=TGD37084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016158396.1;locus_tag=C9F07_32275;partial=true;product=tryptophan synthase subunit beta;protein_id=TGD37084.1;start_range=.,1;transl_table=11 PYKI01003209.1 Genbank gene 746 1965 . - . ID=gene-C9F07_32280;Name=C9F07_32280;end_range=1965,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32280;partial=true PYKI01003209.1 Protein Homology CDS 746 1965 . - 2 ID=cds-TGD37085.1;Parent=gene-C9F07_32280;Dbxref=NCBI_GP:TGD37085.1;Name=TGD37085.1;end_range=1965,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=C9F07_32280;partial=true;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=TGD37085.1;transl_table=11 ##sequence-region PYKI01002204.1 1 1962 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002204.1 Genbank region 1 1962 . + . ID=PYKI01002204.1:1..1962;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002204.1 Genbank gene 15 728 . - . ID=gene-C9F07_21440;Name=C9F07_21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21440 PYKI01002204.1 Protein Homology CDS 15 728 . - 0 ID=cds-TGD56521.1;Parent=gene-C9F07_21440;Dbxref=NCBI_GP:TGD56521.1;Name=TGD56521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457021.1;locus_tag=C9F07_21440;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=TGD56521.1;transl_table=11 PYKI01002204.1 Genbank pseudogene 903 1874 . - . ID=gene-C9F07_21445;Name=C9F07_21445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21445;pseudo=true PYKI01002204.1 Protein Homology CDS 903 1874 . - 0 ID=cds-C9F07_21445;Parent=gene-C9F07_21445;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=C9F07_21445;product=outer membrane protein assembly factor BamC;pseudo=true;transl_table=11 ##sequence-region PYKI01002689.1 1 1959 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002689.1 Genbank region 1 1959 . + . ID=PYKI01002689.1:1..1959;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002689.1 Genbank gene 7 261 . - . ID=gene-C9F07_26780;Name=C9F07_26780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26780 PYKI01002689.1 Protein Homology CDS 7 261 . - 0 ID=cds-TGD48415.1;Parent=gene-C9F07_26780;Dbxref=NCBI_GP:TGD48415.1;Name=TGD48415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=C9F07_26780;product=hypothetical protein;protein_id=TGD48415.1;transl_table=11 PYKI01002689.1 Genbank gene 260 451 . + . ID=gene-C9F07_26785;Name=C9F07_26785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26785 PYKI01002689.1 Protein Homology CDS 260 451 . + 0 ID=cds-TGD48416.1;Parent=gene-C9F07_26785;Dbxref=NCBI_GP:TGD48416.1;Name=TGD48416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576222.1;locus_tag=C9F07_26785;product=hypothetical protein;protein_id=TGD48416.1;transl_table=11 PYKI01002689.1 Genbank gene 586 1158 . + . ID=gene-C9F07_26790;Name=C9F07_26790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26790 PYKI01002689.1 Protein Homology CDS 586 1158 . + 0 ID=cds-TGD48417.1;Parent=gene-C9F07_26790;Dbxref=NCBI_GP:TGD48417.1;Name=TGD48417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311090.2;locus_tag=C9F07_26790;product=elongation factor P-like protein YeiP;protein_id=TGD48417.1;transl_table=11 PYKI01002689.1 Genbank pseudogene 1369 1932 . + . ID=gene-C9F07_26795;Name=C9F07_26795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26795;pseudo=true PYKI01002689.1 Protein Homology CDS 1369 1932 . + 0 ID=cds-C9F07_26795;Parent=gene-C9F07_26795;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456769.1;locus_tag=C9F07_26795;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001433.1 1 1910 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001433.1 Genbank region 1 1910 . + . ID=PYKI01001433.1:1..1910;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001433.1 Genbank gene 1 812 . + . ID=gene-C9F07_13570;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=C9F07_13570;partial=true;start_range=.,1 PYKI01001433.1 Protein Homology CDS 1 812 . + 2 ID=cds-TGD83706.1;Parent=gene-C9F07_13570;Dbxref=NCBI_GP:TGD83706.1;Name=TGD83706.1;Note=helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=C9F07_13570;partial=true;product=exodeoxyribonuclease V subunit alpha;protein_id=TGD83706.1;start_range=.,1;transl_table=11 PYKI01001433.1 Genbank pseudogene 915 1871 . - . ID=gene-C9F07_13575;Name=C9F07_13575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_13575;pseudo=true PYKI01001433.1 Protein Homology CDS 915 1871 . - 0 ID=cds-C9F07_13575;Parent=gene-C9F07_13575;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457385.1;locus_tag=C9F07_13575;product=amino-acid N-acetyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01002088.1 1 1958 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002088.1 Genbank region 1 1958 . + . ID=PYKI01002088.1:1..1958;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002088.1 Genbank pseudogene 70 750 . - . ID=gene-C9F07_20265;Name=C9F07_20265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20265;pseudo=true PYKI01002088.1 Protein Homology CDS 70 750 . - 0 ID=cds-C9F07_20265;Parent=gene-C9F07_20265;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458869.1;locus_tag=C9F07_20265;product=anaerobic ribonucleoside-triphosphate reductase;pseudo=true;transl_table=11 PYKI01002088.1 Genbank pseudogene 1159 1875 . - . ID=gene-C9F07_20270;Name=C9F07_20270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20270;pseudo=true PYKI01002088.1 Protein Homology CDS 1159 1875 . - 0 ID=cds-C9F07_20270;Parent=gene-C9F07_20270;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458871.1;locus_tag=C9F07_20270;product=alpha%2Calpha-phosphotrehalase;pseudo=true;transl_table=11 ##sequence-region PYKI01001527.1 1 1958 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001527.1 Genbank region 1 1958 . + . ID=PYKI01001527.1:1..1958;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001527.1 Genbank gene 1 630 . - . ID=gene-C9F07_14575;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=C9F07_14575;partial=true;start_range=.,1 PYKI01001527.1 Protein Homology CDS 1 630 . - 0 ID=cds-TGD76427.1;Parent=gene-C9F07_14575;Dbxref=NCBI_GP:TGD76427.1;Name=TGD76427.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=C9F07_14575;partial=true;product=two-component system sensor histidine kinase PhoQ;protein_id=TGD76427.1;start_range=.,1;transl_table=11 PYKI01001527.1 Genbank gene 630 1304 . - . ID=gene-C9F07_14580;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=C9F07_14580 PYKI01001527.1 Protein Homology CDS 630 1304 . - 0 ID=cds-TGD76428.1;Parent=gene-C9F07_14580;Dbxref=NCBI_GP:TGD76428.1;Name=TGD76428.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460201.1;locus_tag=C9F07_14580;product=two-component system response regulator PhoP;protein_id=TGD76428.1;transl_table=11 PYKI01001527.1 Genbank gene 1428 1958 . - . ID=gene-C9F07_14585;Name=C9F07_14585;end_range=1958,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14585;partial=true PYKI01001527.1 Protein Homology CDS 1428 1958 . - 0 ID=cds-TGD76429.1;Parent=gene-C9F07_14585;Dbxref=NCBI_GP:TGD76429.1;Name=TGD76429.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;end_range=1958,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=C9F07_14585;partial=true;product=adenylosuccinate lyase;protein_id=TGD76429.1;transl_table=11 ##sequence-region PYKI01001159.1 1 1957 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001159.1 Genbank region 1 1957 . + . ID=PYKI01001159.1:1..1957;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001159.1 Genbank gene 1 158 . - . ID=gene-C9F07_10840;Name=C9F07_10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10840;partial=true;start_range=.,1 PYKI01001159.1 Protein Homology CDS 1 158 . - 0 ID=cds-TGD93443.1;Parent=gene-C9F07_10840;Dbxref=NCBI_GP:TGD93443.1;Name=TGD93443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441950.1;locus_tag=C9F07_10840;partial=true;product=Holliday junction branch migration DNA helicase RuvB;protein_id=TGD93443.1;start_range=.,1;transl_table=11 PYKI01001159.1 Genbank pseudogene 167 778 . - . ID=gene-C9F07_10845;Name=C9F07_10845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10845;pseudo=true PYKI01001159.1 Protein Homology CDS 167 778 . - 0 ID=cds-C9F07_10845;Parent=gene-C9F07_10845;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456462.1;locus_tag=C9F07_10845;product=Holliday junction branch migration protein RuvA;pseudo=true;transl_table=11 PYKI01001159.1 Genbank gene 1137 1811 . - . ID=gene-C9F07_10850;Name=C9F07_10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10850 PYKI01001159.1 Protein Homology CDS 1137 1811 . - 0 ID=cds-TGD93444.1;Parent=gene-C9F07_10850;Dbxref=NCBI_GP:TGD93444.1;Name=TGD93444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456463.1;locus_tag=C9F07_10850;product=hypothetical protein;protein_id=TGD93444.1;transl_table=11 ##sequence-region PYKI01002941.1 1 1957 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002941.1 Genbank region 1 1957 . + . ID=PYKI01002941.1:1..1957;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002941.1 Genbank gene 1 617 . - . ID=gene-C9F07_29470;Name=C9F07_29470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29470;partial=true;start_range=.,1 PYKI01002941.1 Protein Homology CDS 1 617 . - 0 ID=cds-TGD42536.1;Parent=gene-C9F07_29470;Dbxref=NCBI_GP:TGD42536.1;Name=TGD42536.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457843.1;locus_tag=C9F07_29470;partial=true;product=threonine ammonia-lyase%2C biosynthetic;protein_id=TGD42536.1;start_range=.,1;transl_table=11 PYKI01002941.1 Genbank gene 620 1873 . - . ID=gene-C9F07_29475;Name=C9F07_29475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29475 PYKI01002941.1 Protein Homology CDS 620 1873 . - 0 ID=cds-TGD42537.1;Parent=gene-C9F07_29475;Dbxref=NCBI_GP:TGD42537.1;Name=TGD42537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=C9F07_29475;product=hypothetical protein;protein_id=TGD42537.1;transl_table=11 PYKI01002941.1 Genbank gene 1884 1957 . - . ID=gene-C9F07_29480;Name=C9F07_29480;end_range=1957,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29480;partial=true PYKI01002941.1 Protein Homology CDS 1884 1957 . - 2 ID=cds-TGD42538.1;Parent=gene-C9F07_29480;Dbxref=NCBI_GP:TGD42538.1;Name=TGD42538.1;end_range=1957,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458162.1;locus_tag=C9F07_29480;partial=true;product=PTS fructose transporter subunit IIA;protein_id=TGD42538.1;transl_table=11 ##sequence-region PYKI01003268.1 1 1954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003268.1 Genbank region 1 1954 . + . ID=PYKI01003268.1:1..1954;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003268.1 Genbank gene 1 475 . + . ID=gene-C9F07_32865;Name=C9F07_32865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32865;partial=true;start_range=.,1 PYKI01003268.1 Protein Homology CDS 1 475 . + 1 ID=cds-TGD36209.1;Parent=gene-C9F07_32865;Dbxref=NCBI_GP:TGD36209.1;Name=TGD36209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454777.1;locus_tag=C9F07_32865;partial=true;product=transcriptional regulator;protein_id=TGD36209.1;start_range=.,1;transl_table=11 PYKI01003268.1 Genbank gene 505 1299 . - . ID=gene-C9F07_32870;Name=C9F07_32870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32870 PYKI01003268.1 Protein Homology CDS 505 1299 . - 0 ID=cds-TGD36210.1;Parent=gene-C9F07_32870;Dbxref=NCBI_GP:TGD36210.1;Name=TGD36210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=C9F07_32870;product=adenosylmethionine decarboxylase;protein_id=TGD36210.1;transl_table=11 PYKI01003268.1 Genbank gene 1320 1954 . - . ID=gene-C9F07_32875;Name=C9F07_32875;end_range=1954,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32875;partial=true PYKI01003268.1 Protein Homology CDS 1320 1954 . - 2 ID=cds-TGD36211.1;Parent=gene-C9F07_32875;Dbxref=NCBI_GP:TGD36211.1;Name=TGD36211.1;end_range=1954,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=C9F07_32875;partial=true;product=polyamine aminopropyltransferase;protein_id=TGD36211.1;transl_table=11 ##sequence-region PYKI01002333.1 1 1950 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002333.1 Genbank region 1 1950 . + . ID=PYKI01002333.1:1..1950;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002333.1 Genbank gene 1 917 . - . ID=gene-C9F07_22875;Name=C9F07_22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22875;partial=true;start_range=.,1 PYKI01002333.1 Protein Homology CDS 1 917 . - 0 ID=cds-TGD53730.1;Parent=gene-C9F07_22875;Dbxref=NCBI_GP:TGD53730.1;Name=TGD53730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458810.1;locus_tag=C9F07_22875;partial=true;product=hypothetical protein;protein_id=TGD53730.1;start_range=.,1;transl_table=11 PYKI01002333.1 Genbank gene 920 1558 . - . ID=gene-C9F07_22880;Name=C9F07_22880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22880 PYKI01002333.1 Protein Homology CDS 920 1558 . - 0 ID=cds-TGD53731.1;Parent=gene-C9F07_22880;Dbxref=NCBI_GP:TGD53731.1;Name=TGD53731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=C9F07_22880;product=DUF1190 domain-containing protein;protein_id=TGD53731.1;transl_table=11 PYKI01002333.1 Genbank gene 1568 1950 . - . ID=gene-C9F07_22885;Name=C9F07_22885;end_range=1950,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22885;partial=true PYKI01002333.1 Protein Homology CDS 1568 1950 . - 2 ID=cds-TGD53732.1;Parent=gene-C9F07_22885;Dbxref=NCBI_GP:TGD53732.1;Name=TGD53732.1;end_range=1950,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=C9F07_22885;partial=true;product=hypothetical protein;protein_id=TGD53732.1;transl_table=11 ##sequence-region PYKI01002321.1 1 1949 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002321.1 Genbank region 1 1949 . + . ID=PYKI01002321.1:1..1949;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002321.1 Genbank pseudogene 95 400 . - . ID=gene-C9F07_22765;Name=C9F07_22765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22765;pseudo=true PYKI01002321.1 Protein Homology CDS 95 400 . - 0 ID=cds-C9F07_22765;Parent=gene-C9F07_22765;Note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456828.1;locus_tag=C9F07_22765;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;pseudo=true;transl_table=11 PYKI01002321.1 Genbank gene 390 1934 . - . ID=gene-C9F07_22770;Name=C9F07_22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22770 PYKI01002321.1 Protein Homology CDS 390 1934 . - 0 ID=cds-TGD54100.1;Parent=gene-C9F07_22770;Dbxref=NCBI_GP:TGD54100.1;Name=TGD54100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020241231.1;locus_tag=C9F07_22770;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=TGD54100.1;transl_table=11 ##sequence-region PYKI01001451.1 1 1947 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001451.1 Genbank region 1 1947 . + . ID=PYKI01001451.1:1..1947;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001451.1 Genbank gene 1 275 . - . ID=gene-C9F07_13745;Name=C9F07_13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13745;partial=true;start_range=.,1 PYKI01001451.1 Protein Homology CDS 1 275 . - 0 ID=cds-TGD83422.1;Parent=gene-C9F07_13745;Dbxref=NCBI_GP:TGD83422.1;Name=TGD83422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456781.1;locus_tag=C9F07_13745;partial=true;product=ATP-dependent helicase;protein_id=TGD83422.1;start_range=.,1;transl_table=11 PYKI01001451.1 Genbank gene 427 1122 . + . ID=gene-C9F07_13750;Name=C9F07_13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13750 PYKI01001451.1 Protein Homology CDS 427 1122 . + 0 ID=cds-TGD83423.1;Parent=gene-C9F07_13750;Dbxref=NCBI_GP:TGD83423.1;Name=TGD83423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456780.1;locus_tag=C9F07_13750;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=TGD83423.1;transl_table=11 PYKI01001451.1 Genbank gene 1150 1947 . + . ID=gene-C9F07_13755;Name=C9F07_13755;end_range=1947,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13755;partial=true PYKI01001451.1 Protein Homology CDS 1150 1947 . + 0 ID=cds-TGD83424.1;Parent=gene-C9F07_13755;Dbxref=NCBI_GP:TGD83424.1;Name=TGD83424.1;end_range=1947,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=C9F07_13755;partial=true;product=Bcr/CflA family drug resistance efflux transporter;protein_id=TGD83424.1;transl_table=11 ##sequence-region PYKI01000995.1 1 1942 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000995.1 Genbank region 1 1942 . + . ID=PYKI01000995.1:1..1942;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000995.1 Genbank pseudogene 62 214 . - . ID=gene-C9F07_09085;Name=C9F07_09085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09085;pseudo=true PYKI01000995.1 Protein Homology CDS 62 214 . - 0 ID=cds-C9F07_09085;Parent=gene-C9F07_09085;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455015.1;locus_tag=C9F07_09085;product=aldo/keto reductase;pseudo=true;transl_table=11 PYKI01000995.1 Genbank gene 271 1942 . - . ID=gene-C9F07_09090;Name=C9F07_09090;end_range=1942,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09090;partial=true PYKI01000995.1 Protein Homology CDS 271 1942 . - 1 ID=cds-TGD98847.1;Parent=gene-C9F07_09090;Dbxref=NCBI_GP:TGD98847.1;Name=TGD98847.1;end_range=1942,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=C9F07_09090;partial=true;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=TGD98847.1;transl_table=11 ##sequence-region PYKI01002871.1 1 1942 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002871.1 Genbank region 1 1942 . + . ID=PYKI01002871.1:1..1942;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002871.1 Genbank gene 1 743 . + . ID=gene-C9F07_28765;Name=C9F07_28765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28765;partial=true;start_range=.,1 PYKI01002871.1 Protein Homology CDS 1 743 . + 2 ID=cds-TGD44504.1;Parent=gene-C9F07_28765;Dbxref=NCBI_GP:TGD44504.1;Name=TGD44504.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00664.21;locus_tag=C9F07_28765;partial=true;product=cysteine/glutathione ABC transporter permease/ATP-binding protein CydD;protein_id=TGD44504.1;start_range=.,1;transl_table=11 PYKI01002871.1 Genbank gene 780 1577 . + . ID=gene-C9F07_28770;Name=C9F07_28770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28770 PYKI01002871.1 Protein Homology CDS 780 1577 . + 0 ID=cds-TGD44505.1;Parent=gene-C9F07_28770;Dbxref=NCBI_GP:TGD44505.1;Name=TGD44505.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00005.25;locus_tag=C9F07_28770;product=ABC transporter ATP-binding protein;protein_id=TGD44505.1;transl_table=11 PYKI01002871.1 Genbank gene 1578 1942 . + . ID=gene-C9F07_28775;Name=C9F07_28775;end_range=1942,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28775;partial=true PYKI01002871.1 Protein Homology CDS 1578 1942 . + 0 ID=cds-TGD44506.1;Parent=gene-C9F07_28775;Dbxref=NCBI_GP:TGD44506.1;Name=TGD44506.1;end_range=1942,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455444.1;locus_tag=C9F07_28775;partial=true;product=hypothetical protein;protein_id=TGD44506.1;transl_table=11 ##sequence-region PYKI01001639.1 1 1940 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001639.1 Genbank region 1 1940 . + . ID=PYKI01001639.1:1..1940;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001639.1 Genbank gene 1 502 . + . ID=gene-C9F07_15665;Name=C9F07_15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15665;partial=true;start_range=.,1 PYKI01001639.1 Protein Homology CDS 1 502 . + 1 ID=cds-TGD70386.1;Parent=gene-C9F07_15665;Dbxref=NCBI_GP:TGD70386.1;Name=TGD70386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=C9F07_15665;partial=true;product=methyl-accepting chemotaxis protein;protein_id=TGD70386.1;start_range=.,1;transl_table=11 PYKI01001639.1 Genbank gene 563 1486 . - . ID=gene-C9F07_15670;Name=C9F07_15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15670 PYKI01001639.1 Protein Homology CDS 563 1486 . - 0 ID=cds-TGD70387.1;Parent=gene-C9F07_15670;Dbxref=NCBI_GP:TGD70387.1;Name=TGD70387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=C9F07_15670;product=LysR family transcriptional regulator;protein_id=TGD70387.1;transl_table=11 PYKI01001639.1 Genbank gene 1779 1940 . + . ID=gene-C9F07_15675;Name=C9F07_15675;end_range=1940,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15675;partial=true PYKI01001639.1 Protein Homology CDS 1779 1940 . + 0 ID=cds-TGD70388.1;Parent=gene-C9F07_15675;Dbxref=NCBI_GP:TGD70388.1;Name=TGD70388.1;end_range=1940,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=C9F07_15675;partial=true;product=DUF1338 domain-containing protein;protein_id=TGD70388.1;transl_table=11 ##sequence-region PYKI01002605.1 1 1939 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002605.1 Genbank region 1 1939 . + . ID=PYKI01002605.1:1..1939;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002605.1 Genbank pseudogene 69 854 . - . ID=gene-C9F07_25860;Name=C9F07_25860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25860;pseudo=true PYKI01002605.1 Protein Homology CDS 69 854 . - 0 ID=cds-C9F07_25860;Parent=gene-C9F07_25860;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454876.1;locus_tag=C9F07_25860;product=protein disaggregation chaperone;pseudo=true;transl_table=11 PYKI01002605.1 Genbank gene 1223 1939 . + . ID=gene-C9F07_25865;Name=tagK;end_range=1939,.;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=C9F07_25865;partial=true PYKI01002605.1 Protein Homology CDS 1223 1939 . + 0 ID=cds-TGD49591.1;Parent=gene-C9F07_25865;Dbxref=NCBI_GP:TGD49591.1;Name=TGD49591.1;end_range=1939,.;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454874.1;locus_tag=C9F07_25865;partial=true;product=type VI secretion system-associated protein TagK;protein_id=TGD49591.1;transl_table=11 ##sequence-region PYKI01003188.1 1 4702 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003188.1 Genbank region 1 4702 . + . ID=PYKI01003188.1:1..4702;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003188.1 Genbank gene 231 1436 . + . ID=gene-C9F07_31990;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=C9F07_31990 PYKI01003188.1 Protein Homology CDS 231 1436 . + 0 ID=cds-TGD37527.1;Parent=gene-C9F07_31990;Dbxref=NCBI_GP:TGD37527.1;Name=TGD37527.1;gbkey=CDS;gene=gltS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458182.1;locus_tag=C9F07_31990;product=sodium/glutamate symporter;protein_id=TGD37527.1;transl_table=11 PYKI01003188.1 Genbank gene 1472 3553 . - . ID=gene-C9F07_31995;Name=C9F07_31995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31995 PYKI01003188.1 Protein Homology CDS 1472 3553 . - 0 ID=cds-TGD37528.1;Parent=gene-C9F07_31995;Dbxref=NCBI_GP:TGD37528.1;Name=TGD37528.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122596.1;locus_tag=C9F07_31995;product=ATP-dependent DNA helicase RecG;protein_id=TGD37528.1;transl_table=11 PYKI01003188.1 Genbank gene 3559 4248 . - . ID=gene-C9F07_32000;Name=C9F07_32000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32000 PYKI01003188.1 Protein Homology CDS 3559 4248 . - 0 ID=cds-TGD37529.1;Parent=gene-C9F07_32000;Dbxref=NCBI_GP:TGD37529.1;Name=TGD37529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=C9F07_32000;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=TGD37529.1;transl_table=11 PYKI01003188.1 Genbank pseudogene 4253 4702 . - . ID=gene-C9F07_32005;Name=C9F07_32005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32005;pseudo=true PYKI01003188.1 Protein Homology CDS 4253 4702 . - 0 ID=cds-C9F07_32005;Parent=gene-C9F07_32005;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458185.1;locus_tag=C9F07_32005;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000522.1 1 1939 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000522.1 Genbank region 1 1939 . + . ID=PYKI01000522.1:1..1939;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000522.1 Genbank gene 1 770 . + . ID=gene-C9F07_04325;Name=C9F07_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04325;partial=true;start_range=.,1 PYKI01000522.1 Protein Homology CDS 1 770 . + 2 ID=cds-TGE16219.1;Parent=gene-C9F07_04325;Dbxref=NCBI_GP:TGE16219.1;Name=TGE16219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310863.1;locus_tag=C9F07_04325;partial=true;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=TGE16219.1;start_range=.,1;transl_table=11 PYKI01000522.1 Genbank pseudogene 774 1844 . + . ID=gene-C9F07_04330;Name=C9F07_04330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04330;pseudo=true PYKI01000522.1 Protein Homology CDS 774 1844 . + 0 ID=cds-C9F07_04330;Parent=gene-C9F07_04330;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=C9F07_04330;product=phosphomannomutase CpsG;pseudo=true;transl_table=11 ##sequence-region PYKI01001463.1 1 1935 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001463.1 Genbank region 1 1935 . + . ID=PYKI01001463.1:1..1935;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001463.1 Genbank gene 1 732 . + . ID=gene-C9F07_13875;Name=C9F07_13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13875;partial=true;start_range=.,1 PYKI01001463.1 Protein Homology CDS 1 732 . + 0 ID=cds-TGD82064.1;Parent=gene-C9F07_13875;Dbxref=NCBI_GP:TGD82064.1;Name=TGD82064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=C9F07_13875;partial=true;product=diguanylate cyclase;protein_id=TGD82064.1;start_range=.,1;transl_table=11 PYKI01001463.1 Genbank gene 888 1235 . - . ID=gene-C9F07_13880;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=C9F07_13880 PYKI01001463.1 Protein Homology CDS 888 1235 . - 0 ID=cds-TGD82065.1;Parent=gene-C9F07_13880;Dbxref=NCBI_GP:TGD82065.1;Name=TGD82065.1;gbkey=CDS;gene=rplS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457143.1;locus_tag=C9F07_13880;product=50S ribosomal protein L19;protein_id=TGD82065.1;transl_table=11 PYKI01001463.1 Genbank gene 1276 1935 . - . ID=gene-C9F07_13885;Name=trmD;end_range=1935,.;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=C9F07_13885;partial=true PYKI01001463.1 Protein Homology CDS 1276 1935 . - 0 ID=cds-TGD82066.1;Parent=gene-C9F07_13885;Dbxref=NCBI_GP:TGD82066.1;Name=TGD82066.1;end_range=1935,.;gbkey=CDS;gene=trmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=C9F07_13885;partial=true;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=TGD82066.1;transl_table=11 ##sequence-region PYKI01002564.1 1 1933 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002564.1 Genbank region 1 1933 . + . ID=PYKI01002564.1:1..1933;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002564.1 Genbank pseudogene 186 485 . - . ID=gene-C9F07_25455;Name=C9F07_25455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25455;pseudo=true PYKI01002564.1 Protein Homology CDS 186 485 . - 0 ID=cds-C9F07_25455;Parent=gene-C9F07_25455;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=C9F07_25455;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002564.1 Genbank gene 525 1556 . - . ID=gene-C9F07_25460;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=C9F07_25460 PYKI01002564.1 Protein Homology CDS 525 1556 . - 0 ID=cds-TGD49833.1;Parent=gene-C9F07_25460;Dbxref=NCBI_GP:TGD49833.1;Name=TGD49833.1;gbkey=CDS;gene=metN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=C9F07_25460;product=methionine import ATP-binding protein MetN 1;protein_id=TGD49833.1;transl_table=11 PYKI01002564.1 Genbank gene 1746 1933 . + . ID=gene-C9F07_25465;Name=C9F07_25465;end_range=1933,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25465;partial=true PYKI01002564.1 Protein Homology CDS 1746 1933 . + 0 ID=cds-TGD49834.1;Parent=gene-C9F07_25465;Dbxref=NCBI_GP:TGD49834.1;Name=TGD49834.1;end_range=1933,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454857.1;locus_tag=C9F07_25465;partial=true;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=TGD49834.1;transl_table=11 ##sequence-region PYKI01001471.1 1 1932 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001471.1 Genbank region 1 1932 . + . ID=PYKI01001471.1:1..1932;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001471.1 Genbank gene 1 233 . + . ID=gene-C9F07_13945;Name=C9F07_13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13945;partial=true;start_range=.,1 PYKI01001471.1 Protein Homology CDS 1 233 . + 2 ID=cds-TGD81029.1;Parent=gene-C9F07_13945;Dbxref=NCBI_GP:TGD81029.1;Name=TGD81029.1;Note=with LptABCF is involved in the transport of lipopolysaccharides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458897.1;locus_tag=C9F07_13945;partial=true;product=lipopolysaccharide ABC transporter permease LptG;protein_id=TGD81029.1;start_range=.,1;transl_table=11 PYKI01001471.1 Genbank gene 450 1448 . - . ID=gene-C9F07_13950;Name=C9F07_13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13950 PYKI01001471.1 Protein Homology CDS 450 1448 . - 0 ID=cds-TGD81030.1;Parent=gene-C9F07_13950;Dbxref=NCBI_GP:TGD81030.1;Name=TGD81030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=C9F07_13950;product=transcriptional regulator;protein_id=TGD81030.1;transl_table=11 PYKI01001471.1 Genbank gene 1512 1932 . - . ID=gene-C9F07_13955;Name=C9F07_13955;end_range=1932,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13955;partial=true PYKI01001471.1 Protein Homology CDS 1512 1932 . - 1 ID=cds-TGD81031.1;Parent=gene-C9F07_13955;Dbxref=NCBI_GP:TGD81031.1;Name=TGD81031.1;end_range=1932,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=C9F07_13955;partial=true;product=hypothetical protein;protein_id=TGD81031.1;transl_table=11 ##sequence-region PYKI01001178.1 1 1931 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001178.1 Genbank region 1 1931 . + . ID=PYKI01001178.1:1..1931;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001178.1 Genbank gene 1 321 . - . ID=gene-C9F07_11010;Name=C9F07_11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11010;partial=true;start_range=.,1 PYKI01001178.1 Protein Homology CDS 1 321 . - 0 ID=cds-TGD92512.1;Parent=gene-C9F07_11010;Dbxref=NCBI_GP:TGD92512.1;Name=TGD92512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454865.1;locus_tag=C9F07_11010;partial=true;product=SAM-dependent methyltransferase;protein_id=TGD92512.1;start_range=.,1;transl_table=11 PYKI01001178.1 Genbank gene 356 1111 . + . ID=gene-C9F07_11015;Name=C9F07_11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11015 PYKI01001178.1 Protein Homology CDS 356 1111 . + 0 ID=cds-TGD92511.1;Parent=gene-C9F07_11015;Dbxref=NCBI_GP:TGD92511.1;Name=TGD92511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=C9F07_11015;product=hydroxyacylglutathione hydrolase;protein_id=TGD92511.1;transl_table=11 PYKI01001178.1 Genbank pseudogene 1183 1899 . + . ID=gene-C9F07_11020;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=pseudogene;gene_synonym=dniR,yafG;locus_tag=C9F07_11020;pseudo=true PYKI01001178.1 Protein Homology CDS 1183 1899 . + 0 ID=cds-C9F07_11020;Parent=gene-C9F07_11020;Note=catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and/or cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=mltD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454863.1;locus_tag=C9F07_11020;product=lytic transglycosylase;pseudo=true;transl_table=11 ##sequence-region PYKI01003558.1 1 1930 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003558.1 Genbank region 1 1930 . + . ID=PYKI01003558.1:1..1930;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003558.1 Genbank gene 1 1049 . - . ID=gene-C9F07_35925;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=C9F07_35925;partial=true;start_range=.,1 PYKI01003558.1 Protein Homology CDS 1 1049 . - 0 ID=cds-TGD30580.1;Parent=gene-C9F07_35925;Dbxref=NCBI_GP:TGD30580.1;Name=TGD30580.1;Note=cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake;gbkey=CDS;gene=feoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=C9F07_35925;partial=true;product=ferrous iron transport protein B;protein_id=TGD30580.1;start_range=.,1;transl_table=11 PYKI01003558.1 Genbank gene 1068 1295 . - . ID=gene-C9F07_35930;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=C9F07_35930 PYKI01003558.1 Protein Homology CDS 1068 1295 . - 0 ID=cds-TGD30581.1;Parent=gene-C9F07_35930;Dbxref=NCBI_GP:TGD30581.1;Name=TGD30581.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458399.1;locus_tag=C9F07_35930;product=ferrous iron transporter A;protein_id=TGD30581.1;transl_table=11 PYKI01003558.1 Genbank gene 1315 1545 . - . ID=gene-C9F07_35935;Name=C9F07_35935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35935 PYKI01003558.1 Protein Homology CDS 1315 1545 . - 0 ID=cds-TGD30582.1;Parent=gene-C9F07_35935;Dbxref=NCBI_GP:TGD30582.1;Name=TGD30582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751774.1;locus_tag=C9F07_35935;product=hypothetical protein;protein_id=TGD30582.1;transl_table=11 PYKI01003558.1 Genbank pseudogene 1735 1930 . - . ID=gene-C9F07_35940;Name=C9F07_35940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35940;pseudo=true PYKI01003558.1 Protein Homology CDS 1735 1930 . - 1 ID=cds-C9F07_35940;Parent=gene-C9F07_35940;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458400.1;locus_tag=C9F07_35940;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000427.1 1 1928 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000427.1 Genbank region 1 1928 . + . ID=PYKI01000427.1:1..1928;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000427.1 Genbank pseudogene 1 166 . + . ID=gene-C9F07_03300;Name=C9F07_03300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03300;pseudo=true PYKI01000427.1 Protein Homology CDS 1 166 . + 1 ID=cds-C9F07_03300;Parent=gene-C9F07_03300;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456157.1;locus_tag=C9F07_03300;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000427.1 Genbank gene 454 1800 . - . ID=gene-C9F07_03305;Name=C9F07_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03305 PYKI01000427.1 Protein Homology CDS 454 1800 . - 0 ID=cds-TGE20836.1;Parent=gene-C9F07_03305;Dbxref=NCBI_GP:TGE20836.1;Name=TGE20836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=C9F07_03305;product=L-cystine transporter;protein_id=TGE20836.1;transl_table=11 ##sequence-region PYKI01000230.1 1 1928 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000230.1 Genbank region 1 1928 . + . ID=PYKI01000230.1:1..1928;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000230.1 Genbank gene 1 371 . - . ID=gene-C9F07_01500;Name=C9F07_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01500;partial=true;start_range=.,1 PYKI01000230.1 Protein Homology CDS 1 371 . - 0 ID=cds-TGE27879.1;Parent=gene-C9F07_01500;Dbxref=NCBI_GP:TGE27879.1;Name=TGE27879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=C9F07_01500;partial=true;product=cobyrinic acid a%2Cc-diamide synthase;protein_id=TGE27879.1;start_range=.,1;transl_table=11 PYKI01000230.1 cmsearch riboswitch 468 643 . - . ID=id-PYKI01000230.1:468..643;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00174,COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PYKI01000230.1 Genbank gene 969 1880 . - . ID=gene-C9F07_01505;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=C9F07_01505 PYKI01000230.1 Protein Homology CDS 969 1880 . - 0 ID=cds-TGE27878.1;Parent=gene-C9F07_01505;Dbxref=NCBI_GP:TGE27878.1;Name=TGE27878.1;gbkey=CDS;gene=pocR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=C9F07_01505;product=regulatory protein PocR;protein_id=TGE27878.1;transl_table=11 ##sequence-region PYKI01000649.1 1 1927 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000649.1 Genbank region 1 1927 . + . ID=PYKI01000649.1:1..1927;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000649.1 Genbank gene 61 1050 . - . ID=gene-C9F07_05610;Name=C9F07_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05610 PYKI01000649.1 Protein Homology CDS 61 1050 . - 0 ID=cds-TGE12425.1;Parent=gene-C9F07_05610;Dbxref=NCBI_GP:TGE12425.1;Name=TGE12425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312187.1;locus_tag=C9F07_05610;product=DNA-directed RNA polymerase subunit alpha;protein_id=TGE12425.1;transl_table=11 PYKI01000649.1 Genbank gene 1076 1696 . - . ID=gene-C9F07_05615;Name=C9F07_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05615 PYKI01000649.1 Protein Homology CDS 1076 1696 . - 0 ID=cds-TGE12426.1;Parent=gene-C9F07_05615;Dbxref=NCBI_GP:TGE12426.1;Name=TGE12426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462320.1;locus_tag=C9F07_05615;product=30S ribosomal protein S4;protein_id=TGE12426.1;transl_table=11 PYKI01000649.1 Genbank gene 1730 1927 . - . ID=gene-C9F07_05620;Name=rpsK;end_range=1927,.;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=C9F07_05620;partial=true PYKI01000649.1 Protein Homology CDS 1730 1927 . - 0 ID=cds-TGE12427.1;Parent=gene-C9F07_05620;Dbxref=NCBI_GP:TGE12427.1;Name=TGE12427.1;end_range=1927,.;gbkey=CDS;gene=rpsK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=C9F07_05620;partial=true;product=30S ribosomal protein S11;protein_id=TGE12427.1;transl_table=11 ##sequence-region PYKI01000744.1 1 4694 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000744.1 Genbank region 1 4694 . + . ID=PYKI01000744.1:1..4694;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000744.1 Genbank gene 1 533 . - . ID=gene-C9F07_06545;Name=C9F07_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06545;partial=true;start_range=.,1 PYKI01000744.1 Protein Homology CDS 1 533 . - 0 ID=cds-TGE10765.1;Parent=gene-C9F07_06545;Dbxref=NCBI_GP:TGE10765.1;Name=TGE10765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=C9F07_06545;partial=true;product=aromatic amino acid transporter AroP;protein_id=TGE10765.1;start_range=.,1;transl_table=11 PYKI01000744.1 Genbank pseudogene 859 1911 . + . ID=gene-C9F07_06550;Name=C9F07_06550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06550;pseudo=true PYKI01000744.1 Protein Homology CDS 859 1911 . + 0 ID=cds-C9F07_06550;Parent=gene-C9F07_06550;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=C9F07_06550;product=DNA repair protein;pseudo=true;transl_table=11 PYKI01000744.1 Genbank pseudogene 1895 2884 . + . ID=gene-C9F07_06555;Name=C9F07_06555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06555;pseudo=true PYKI01000744.1 Protein Homology CDS 1895 2884 . + 0 ID=cds-C9F07_06555;Parent=gene-C9F07_06555;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458049.1;locus_tag=C9F07_06555;product=DNA polymerase I;pseudo=true;transl_table=11 PYKI01000744.1 Genbank gene 3025 3219 . - . ID=gene-C9F07_06560;Name=C9F07_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06560 PYKI01000744.1 Protein Homology CDS 3025 3219 . - 0 ID=cds-TGE10769.1;Parent=gene-C9F07_06560;Dbxref=NCBI_GP:TGE10769.1;Name=TGE10769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001113546.1;locus_tag=C9F07_06560;product=hypothetical protein;protein_id=TGE10769.1;transl_table=11 PYKI01000744.1 Genbank gene 3219 3851 . - . ID=gene-C9F07_06565;Name=C9F07_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06565 PYKI01000744.1 Protein Homology CDS 3219 3851 . - 0 ID=cds-TGE10766.1;Parent=gene-C9F07_06565;Dbxref=NCBI_GP:TGE10766.1;Name=TGE10766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458048.1;locus_tag=C9F07_06565;product=YihA family ribosome biogenesis GTP-binding protein;protein_id=TGE10766.1;transl_table=11 PYKI01000744.1 Genbank gene 4091 4315 . + . ID=gene-C9F07_06570;Name=C9F07_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06570 PYKI01000744.1 Protein Homology CDS 4091 4315 . + 0 ID=cds-TGE10767.1;Parent=gene-C9F07_06570;Dbxref=NCBI_GP:TGE10767.1;Name=TGE10767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=C9F07_06570;product=hypothetical protein;protein_id=TGE10767.1;transl_table=11 PYKI01000744.1 Genbank gene 4434 4694 . + . ID=gene-C9F07_06575;Name=C9F07_06575;end_range=4694,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06575;partial=true PYKI01000744.1 Protein Homology CDS 4434 4694 . + 0 ID=cds-TGE10768.1;Parent=gene-C9F07_06575;Dbxref=NCBI_GP:TGE10768.1;Name=TGE10768.1;end_range=4694,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458046.1;locus_tag=C9F07_06575;partial=true;product=GTPase-activating protein;protein_id=TGE10768.1;transl_table=11 ##sequence-region PYKI01002610.1 1 9733 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002610.1 Genbank region 1 9733 . + . ID=PYKI01002610.1:1..9733;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002610.1 Genbank gene 1 546 . + . ID=gene-C9F07_25920;Name=C9F07_25920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25920;partial=true;start_range=.,1 PYKI01002610.1 Protein Homology CDS 1 546 . + 0 ID=cds-TGD49567.1;Parent=gene-C9F07_25920;Dbxref=NCBI_GP:TGD49567.1;Name=TGD49567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455275.1;locus_tag=C9F07_25920;partial=true;product=DNA recombinase;protein_id=TGD49567.1;start_range=.,1;transl_table=11 PYKI01002610.1 Genbank gene 1006 1341 . + . ID=gene-C9F07_25925;Name=C9F07_25925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25925 PYKI01002610.1 Protein Homology CDS 1006 1341 . + 0 ID=cds-TGD49568.1;Parent=gene-C9F07_25925;Dbxref=NCBI_GP:TGD49568.1;Name=TGD49568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459702.1;locus_tag=C9F07_25925;product=hypothetical protein;protein_id=TGD49568.1;transl_table=11 PYKI01002610.1 Genbank gene 1343 2083 . + . ID=gene-C9F07_25930;Name=C9F07_25930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25930 PYKI01002610.1 Protein Homology CDS 1343 2083 . + 0 ID=cds-TGD49569.1;Parent=gene-C9F07_25930;Dbxref=NCBI_GP:TGD49569.1;Name=TGD49569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455277.1;locus_tag=C9F07_25930;product=transport protein;protein_id=TGD49569.1;transl_table=11 PYKI01002610.1 Genbank gene 2369 3520 . + . ID=gene-C9F07_25935;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=C9F07_25935 PYKI01002610.1 Protein Homology CDS 2369 3520 . + 0 ID=cds-TGD49570.1;Parent=gene-C9F07_25935;Dbxref=NCBI_GP:TGD49570.1;Name=TGD49570.1;gbkey=CDS;gene=glf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459704.1;locus_tag=C9F07_25935;product=UDP-galactopyranose mutase;protein_id=TGD49570.1;transl_table=11 PYKI01002610.1 Genbank gene 3520 4413 . + . ID=gene-C9F07_25940;Name=C9F07_25940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25940 PYKI01002610.1 Protein Homology CDS 3520 4413 . + 0 ID=cds-TGD49571.1;Parent=gene-C9F07_25940;Dbxref=NCBI_GP:TGD49571.1;Name=TGD49571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455279.1;locus_tag=C9F07_25940;product=glycosyltransferase family 2 protein;protein_id=TGD49571.1;transl_table=11 PYKI01002610.1 Genbank gene 4426 5559 . + . ID=gene-C9F07_25945;Name=C9F07_25945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25945 PYKI01002610.1 Protein Homology CDS 4426 5559 . + 0 ID=cds-TGD49572.1;Parent=gene-C9F07_25945;Dbxref=NCBI_GP:TGD49572.1;Name=TGD49572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455280.1;locus_tag=C9F07_25945;product=glycosyltransferase family 1 protein;protein_id=TGD49572.1;transl_table=11 PYKI01002610.1 Genbank gene 5687 6457 . + . ID=gene-C9F07_25950;Name=C9F07_25950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25950 PYKI01002610.1 Protein Homology CDS 5687 6457 . + 0 ID=cds-TGD49573.1;Parent=gene-C9F07_25950;Dbxref=NCBI_GP:TGD49573.1;Name=TGD49573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459707.1;locus_tag=C9F07_25950;product=ABC transporter permease;protein_id=TGD49573.1;transl_table=11 PYKI01002610.1 Genbank gene 6461 7171 . + . ID=gene-C9F07_25955;Name=C9F07_25955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25955 PYKI01002610.1 Protein Homology CDS 6461 7171 . + 0 ID=cds-TGD49574.1;Parent=gene-C9F07_25955;Dbxref=NCBI_GP:TGD49574.1;Name=TGD49574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459708.1;locus_tag=C9F07_25955;product=ABC transporter ATP-binding protein;protein_id=TGD49574.1;transl_table=11 PYKI01002610.1 Genbank gene 7265 9043 . + . ID=gene-C9F07_25960;Name=C9F07_25960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25960 PYKI01002610.1 Protein Homology CDS 7265 9043 . + 0 ID=cds-TGD49575.1;Parent=gene-C9F07_25960;Dbxref=NCBI_GP:TGD49575.1;Name=TGD49575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459709.1;locus_tag=C9F07_25960;product=glycosyltransferase family 2 protein;protein_id=TGD49575.1;transl_table=11 PYKI01002610.1 Genbank gene 9236 9733 . + . ID=gene-C9F07_25965;Name=C9F07_25965;end_range=9733,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25965;partial=true PYKI01002610.1 Protein Homology CDS 9236 9733 . + 0 ID=cds-TGD49576.1;Parent=gene-C9F07_25965;Dbxref=NCBI_GP:TGD49576.1;Name=TGD49576.1;end_range=9733,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455282.1;locus_tag=C9F07_25965;partial=true;product=glycosyl transferase;protein_id=TGD49576.1;transl_table=11 ##sequence-region PYKI01002839.1 1 1926 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002839.1 Genbank region 1 1926 . + . ID=PYKI01002839.1:1..1926;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002839.1 Genbank gene 263 1228 . + . ID=gene-C9F07_28390;Name=C9F07_28390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28390 PYKI01002839.1 Protein Homology CDS 263 1228 . + 0 ID=cds-TGD45572.1;Parent=gene-C9F07_28390;Dbxref=NCBI_GP:TGD45572.1;Name=TGD45572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=C9F07_28390;product=glucokinase;protein_id=TGD45572.1;transl_table=11 ##sequence-region PYKI01001678.1 1 1926 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001678.1 Genbank region 1 1926 . + . ID=PYKI01001678.1:1..1926;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001678.1 Genbank pseudogene 93 488 . - . ID=gene-C9F07_16050;Name=C9F07_16050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16050;pseudo=true PYKI01001678.1 Protein Homology CDS 93 488 . - 0 ID=cds-C9F07_16050;Parent=gene-C9F07_16050;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455194.1;locus_tag=C9F07_16050;product=ribonuclease I;pseudo=true;transl_table=11 PYKI01001678.1 Genbank pseudogene 598 1881 . - . ID=gene-C9F07_16055;Name=C9F07_16055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16055;pseudo=true PYKI01001678.1 Protein Homology CDS 598 1881 . - 0 ID=cds-C9F07_16055;Parent=gene-C9F07_16055;Note=involved in the transport of citrate into the cell along with the export of succinate out of the cell%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=C9F07_16055;product=anion permease;pseudo=true;transl_table=11 ##sequence-region PYKI01001749.1 1 1925 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001749.1 Genbank region 1 1925 . + . ID=PYKI01001749.1:1..1925;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001749.1 Genbank gene 1 820 . + . ID=gene-C9F07_16800;Name=C9F07_16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16800;partial=true;start_range=.,1 PYKI01001749.1 Protein Homology CDS 1 820 . + 1 ID=cds-TGD68305.1;Parent=gene-C9F07_16800;Dbxref=NCBI_GP:TGD68305.1;Name=TGD68305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456501.1;locus_tag=C9F07_16800;partial=true;product=tyrosine transporter TyrP;protein_id=TGD68305.1;start_range=.,1;transl_table=11 PYKI01001749.1 Genbank gene 895 1560 . - . ID=gene-C9F07_16805;Name=C9F07_16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16805 PYKI01001749.1 Protein Homology CDS 895 1560 . - 0 ID=cds-TGD68306.1;Parent=gene-C9F07_16805;Dbxref=NCBI_GP:TGD68306.1;Name=TGD68306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456502.1;locus_tag=C9F07_16805;product=YecA family protein;protein_id=TGD68306.1;transl_table=11 PYKI01001749.1 Genbank gene 1799 1925 . - . ID=gene-C9F07_16810;Name=C9F07_16810;end_range=1925,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16810;partial=true PYKI01001749.1 Protein Homology CDS 1799 1925 . - 1 ID=cds-TGD68307.1;Parent=gene-C9F07_16810;Dbxref=NCBI_GP:TGD68307.1;Name=TGD68307.1;end_range=1925,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=C9F07_16810;partial=true;product=glucose-6-phosphate dehydrogenase;protein_id=TGD68307.1;transl_table=11 ##sequence-region PYKI01003148.1 1 1922 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003148.1 Genbank region 1 1922 . + . ID=PYKI01003148.1:1..1922;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003148.1 Genbank gene 1 168 . - . ID=gene-C9F07_31575;Name=C9F07_31575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31575;partial=true;start_range=.,1 PYKI01003148.1 Protein Homology CDS 1 168 . - 0 ID=cds-TGD38507.1;Parent=gene-C9F07_31575;Dbxref=NCBI_GP:TGD38507.1;Name=TGD38507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454896.1;locus_tag=C9F07_31575;partial=true;product=type VI secretion system tip protein VgrG;protein_id=TGD38507.1;start_range=.,1;transl_table=11 PYKI01003148.1 Genbank gene 293 553 . - . ID=gene-C9F07_31580;Name=C9F07_31580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31580 PYKI01003148.1 Protein Homology CDS 293 553 . - 0 ID=cds-TGD38508.1;Parent=gene-C9F07_31580;Dbxref=NCBI_GP:TGD38508.1;Name=TGD38508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000182320.1;locus_tag=C9F07_31580;product=hypothetical protein;protein_id=TGD38508.1;transl_table=11 PYKI01003148.1 Genbank gene 543 1382 . - . ID=gene-C9F07_31585;Name=C9F07_31585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31585 PYKI01003148.1 Protein Homology CDS 543 1382 . - 0 ID=cds-TGD38509.1;Parent=gene-C9F07_31585;Dbxref=NCBI_GP:TGD38509.1;Name=TGD38509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000654209.1;locus_tag=C9F07_31585;product=hypothetical protein;protein_id=TGD38509.1;transl_table=11 PYKI01003148.1 Genbank gene 1379 1922 . - . ID=gene-C9F07_31590;Name=C9F07_31590;end_range=1922,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31590;partial=true PYKI01003148.1 Protein Homology CDS 1379 1922 . - 1 ID=cds-TGD38510.1;Parent=gene-C9F07_31590;Dbxref=NCBI_GP:TGD38510.1;Name=TGD38510.1;end_range=1922,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254114.1;locus_tag=C9F07_31590;partial=true;product=cytoplasmic protein;protein_id=TGD38510.1;transl_table=11 ##sequence-region PYKI01003494.1 1 1919 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003494.1 Genbank region 1 1919 . + . ID=PYKI01003494.1:1..1919;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003494.1 Genbank pseudogene 83 1234 . + . ID=gene-C9F07_35165;Name=C9F07_35165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35165;pseudo=true PYKI01003494.1 Protein Homology CDS 83 1234 . + 0 ID=cds-C9F07_35165;Parent=gene-C9F07_35165;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=C9F07_35165;product=DUF3971 domain-containing protein;pseudo=true;transl_table=11 PYKI01003494.1 Genbank gene 1379 1919 . + . ID=gene-C9F07_35170;Name=tldD;end_range=1919,.;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=C9F07_35170;partial=true PYKI01003494.1 Protein Homology CDS 1379 1919 . + 0 ID=cds-TGD32172.1;Parent=gene-C9F07_35170;Dbxref=NCBI_GP:TGD32172.1;Name=TGD32172.1;Note=responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA;end_range=1919,.;gbkey=CDS;gene=tldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457744.1;locus_tag=C9F07_35170;partial=true;product=metalloprotease TldD;protein_id=TGD32172.1;transl_table=11 ##sequence-region PYKI01002277.1 1 1916 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002277.1 Genbank region 1 1916 . + . ID=PYKI01002277.1:1..1916;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002277.1 Genbank pseudogene 1 1146 . - . ID=gene-C9F07_22310;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=pseudogene;locus_tag=C9F07_22310;pseudo=true PYKI01002277.1 Protein Homology CDS 1 1146 . - 0 ID=cds-C9F07_22310;Parent=gene-C9F07_22310;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456059.1;locus_tag=C9F07_22310;product=porin OmpS2;pseudo=true;transl_table=11 PYKI01002277.1 Genbank gene 1263 1448 . + . ID=gene-C9F07_22315;Name=C9F07_22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22315 PYKI01002277.1 Protein Homology CDS 1263 1448 . + 0 ID=cds-TGD55026.1;Parent=gene-C9F07_22315;Dbxref=NCBI_GP:TGD55026.1;Name=TGD55026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537866.1;locus_tag=C9F07_22315;product=hypothetical protein;protein_id=TGD55026.1;transl_table=11 PYKI01002277.1 Genbank gene 1626 1916 . - . ID=gene-C9F07_22320;Name=C9F07_22320;end_range=1916,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22320;partial=true PYKI01002277.1 Protein Homology CDS 1626 1916 . - 0 ID=cds-TGD55027.1;Parent=gene-C9F07_22320;Dbxref=NCBI_GP:TGD55027.1;Name=TGD55027.1;Note=response regulator in two-component regulatory system with RstB;end_range=1916,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456057.1;locus_tag=C9F07_22320;partial=true;product=two-component system response regulator RstA;protein_id=TGD55027.1;transl_table=11 ##sequence-region PYKI01002513.1 1 1916 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002513.1 Genbank region 1 1916 . + . ID=PYKI01002513.1:1..1916;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002513.1 Genbank gene 1 1191 . - . ID=gene-C9F07_24905;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=C9F07_24905;partial=true;start_range=.,1 PYKI01002513.1 Protein Homology CDS 1 1191 . - 0 ID=cds-TGD50171.1;Parent=gene-C9F07_24905;Dbxref=NCBI_GP:TGD50171.1;Name=TGD50171.1;gbkey=CDS;gene=nhaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=C9F07_24905;partial=true;product=Na+/H+ antiporter NhaC;protein_id=TGD50171.1;start_range=.,1;transl_table=11 PYKI01002513.1 Genbank gene 1335 1916 . - . ID=gene-C9F07_24910;Name=C9F07_24910;end_range=1916,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24910;partial=true PYKI01002513.1 Protein Homology CDS 1335 1916 . - 0 ID=cds-TGD50172.1;Parent=gene-C9F07_24910;Dbxref=NCBI_GP:TGD50172.1;Name=TGD50172.1;end_range=1916,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=C9F07_24910;partial=true;product=transcriptional regulator;protein_id=TGD50172.1;transl_table=11 ##sequence-region PYKI01001664.1 1 1916 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001664.1 Genbank region 1 1916 . + . ID=PYKI01001664.1:1..1916;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001664.1 Genbank gene 1 306 . + . ID=gene-C9F07_15885;Name=C9F07_15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15885;partial=true;start_range=.,1 PYKI01001664.1 Protein Homology CDS 1 306 . + 0 ID=cds-TGD70140.1;Parent=gene-C9F07_15885;Dbxref=NCBI_GP:TGD70140.1;Name=TGD70140.1;Note=with GsiABD is involved in the transport of glutathione into the cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455385.1;locus_tag=C9F07_15885;partial=true;product=glutathione ABC transporter permease GsiD;protein_id=TGD70140.1;start_range=.,1;transl_table=11 PYKI01001664.1 Genbank gene 397 1722 . - . ID=gene-C9F07_15890;Name=C9F07_15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15890 PYKI01001664.1 Protein Homology CDS 397 1722 . - 0 ID=cds-TGD70141.1;Parent=gene-C9F07_15890;Dbxref=NCBI_GP:TGD70141.1;Name=TGD70141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=C9F07_15890;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=TGD70141.1;transl_table=11 ##sequence-region PYKI01003122.1 1 1915 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003122.1 Genbank region 1 1915 . + . ID=PYKI01003122.1:1..1915;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003122.1 Genbank gene 1 677 . - . ID=gene-C9F07_31220;Name=C9F07_31220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31220;partial=true;start_range=.,1 PYKI01003122.1 Protein Homology CDS 1 677 . - 0 ID=cds-TGD39170.1;Parent=gene-C9F07_31220;Dbxref=NCBI_GP:TGD39170.1;Name=TGD39170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455378.1;locus_tag=C9F07_31220;partial=true;product=glycyl-radical enzyme activating protein;protein_id=TGD39170.1;start_range=.,1;transl_table=11 PYKI01003122.1 Genbank gene 955 1704 . - . ID=gene-C9F07_31225;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=C9F07_31225 PYKI01003122.1 Protein Homology CDS 955 1704 . - 0 ID=cds-TGD39171.1;Parent=gene-C9F07_31225;Dbxref=NCBI_GP:TGD39171.1;Name=TGD39171.1;gbkey=CDS;gene=moeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=C9F07_31225;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=TGD39171.1;transl_table=11 PYKI01003122.1 Genbank gene 1704 1915 . - . ID=gene-C9F07_31230;Name=C9F07_31230;end_range=1915,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31230;partial=true PYKI01003122.1 Protein Homology CDS 1704 1915 . - 2 ID=cds-TGD39172.1;Parent=gene-C9F07_31230;Dbxref=NCBI_GP:TGD39172.1;Name=TGD39172.1;end_range=1915,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459823.3;locus_tag=C9F07_31230;partial=true;product=hypothetical protein;protein_id=TGD39172.1;transl_table=11 ##sequence-region PYKI01003403.1 1 1914 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003403.1 Genbank region 1 1914 . + . ID=PYKI01003403.1:1..1914;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003403.1 Genbank gene 1 690 . + . ID=gene-C9F07_34205;Name=C9F07_34205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34205;partial=true;start_range=.,1 PYKI01003403.1 Protein Homology CDS 1 690 . + 0 ID=cds-TGD33914.1;Parent=gene-C9F07_34205;Dbxref=NCBI_GP:TGD33914.1;Name=TGD33914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457662.3;locus_tag=C9F07_34205;partial=true;product=hypothetical protein;protein_id=TGD33914.1;start_range=.,1;transl_table=11 PYKI01003403.1 Genbank gene 844 1914 . + . ID=gene-C9F07_34210;Name=C9F07_34210;end_range=1914,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34210;partial=true PYKI01003403.1 Protein Homology CDS 844 1914 . + 0 ID=cds-TGD33915.1;Parent=gene-C9F07_34210;Dbxref=NCBI_GP:TGD33915.1;Name=TGD33915.1;end_range=1914,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131807.1;locus_tag=C9F07_34210;partial=true;product=tryptophan permease;protein_id=TGD33915.1;transl_table=11 ##sequence-region PYKI01003166.1 1 4688 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003166.1 Genbank region 1 4688 . + . ID=PYKI01003166.1:1..4688;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003166.1 Genbank gene 1 2411 . - . ID=gene-C9F07_31770;Name=C9F07_31770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31770;partial=true;start_range=.,1 PYKI01003166.1 Protein Homology CDS 1 2411 . - 0 ID=cds-TGD38000.1;Parent=gene-C9F07_31770;Dbxref=NCBI_GP:TGD38000.1;Name=TGD38000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457812.1;locus_tag=C9F07_31770;partial=true;product=class I adenylate cyclase;protein_id=TGD38000.1;start_range=.,1;transl_table=11 PYKI01003166.1 Genbank gene 2788 3729 . + . ID=gene-C9F07_31775;Name=C9F07_31775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31775 PYKI01003166.1 Protein Homology CDS 2788 3729 . + 0 ID=cds-TGD38001.1;Parent=gene-C9F07_31775;Dbxref=NCBI_GP:TGD38001.1;Name=TGD38001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457813.1;locus_tag=C9F07_31775;product=hydroxymethylbilane synthase;protein_id=TGD38001.1;transl_table=11 PYKI01003166.1 Genbank gene 3726 4466 . + . ID=gene-C9F07_31780;Name=C9F07_31780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31780 PYKI01003166.1 Protein Homology CDS 3726 4466 . + 0 ID=cds-TGD38002.1;Parent=gene-C9F07_31780;Dbxref=NCBI_GP:TGD38002.1;Name=TGD38002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=C9F07_31780;product=uroporphyrinogen-III synthase;protein_id=TGD38002.1;transl_table=11 PYKI01003166.1 Genbank gene 4488 4688 . + . ID=gene-C9F07_31785;Name=C9F07_31785;end_range=4688,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31785;partial=true PYKI01003166.1 Protein Homology CDS 4488 4688 . + 0 ID=cds-TGD38003.1;Parent=gene-C9F07_31785;Dbxref=NCBI_GP:TGD38003.1;Name=TGD38003.1;end_range=4688,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=C9F07_31785;partial=true;product=uroporphyrinogen-III C-methyltransferase;protein_id=TGD38003.1;transl_table=11 ##sequence-region PYKI01001319.1 1 1912 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001319.1 Genbank region 1 1912 . + . ID=PYKI01001319.1:1..1912;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001319.1 Genbank gene 1 878 . + . ID=gene-C9F07_12355;Name=C9F07_12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12355;partial=true;start_range=.,1 PYKI01001319.1 Protein Homology CDS 1 878 . + 2 ID=cds-TGD86193.1;Parent=gene-C9F07_12355;Dbxref=NCBI_GP:TGD86193.1;Name=TGD86193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=C9F07_12355;partial=true;product=glycoside hydrolase 105 family protein;protein_id=TGD86193.1;start_range=.,1;transl_table=11 PYKI01001319.1 Genbank pseudogene 932 1792 . - . ID=gene-C9F07_12360;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=pseudogene;locus_tag=C9F07_12360;pseudo=true PYKI01001319.1 Protein Homology CDS 932 1792 . - 0 ID=cds-C9F07_12360;Parent=gene-C9F07_12360;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=mrdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=C9F07_12360;product=serine-type D-Ala-D-Ala carboxypeptidase MrdA;pseudo=true;transl_table=11 ##sequence-region PYKI01001258.1 1 1912 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001258.1 Genbank region 1 1912 . + . ID=PYKI01001258.1:1..1912;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001258.1 Genbank gene 1 340 . + . ID=gene-C9F07_11740;Name=C9F07_11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11740;partial=true;start_range=.,1 PYKI01001258.1 Protein Homology CDS 1 340 . + 1 ID=cds-TGD89477.1;Parent=gene-C9F07_11740;Dbxref=NCBI_GP:TGD89477.1;Name=TGD89477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457747.1;locus_tag=C9F07_11740;partial=true;product=hypothetical protein;protein_id=TGD89477.1;start_range=.,1;transl_table=11 PYKI01001258.1 Genbank gene 330 1799 . + . ID=gene-C9F07_11745;Name=C9F07_11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11745 PYKI01001258.1 Protein Homology CDS 330 1799 . + 0 ID=cds-TGD89478.1;Parent=gene-C9F07_11745;Dbxref=NCBI_GP:TGD89478.1;Name=TGD89478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457746.1;locus_tag=C9F07_11745;product=ribonuclease G;protein_id=TGD89478.1;transl_table=11 ##sequence-region PYKI01002020.1 1 1911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002020.1 Genbank region 1 1911 . + . ID=PYKI01002020.1:1..1911;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002020.1 Genbank gene 1 231 . - . ID=gene-C9F07_19480;Name=C9F07_19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19480;partial=true;start_range=.,1 PYKI01002020.1 Protein Homology CDS 1 231 . - 0 ID=cds-TGD60072.1;Parent=gene-C9F07_19480;Dbxref=NCBI_GP:TGD60072.1;Name=TGD60072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456901.1;locus_tag=C9F07_19480;partial=true;product=hypothetical protein;protein_id=TGD60072.1;start_range=.,1;transl_table=11 PYKI01002020.1 Genbank gene 322 1719 . - . ID=gene-C9F07_19485;Name=C9F07_19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19485 PYKI01002020.1 Protein Homology CDS 322 1719 . - 0 ID=cds-TGD60073.1;Parent=gene-C9F07_19485;Dbxref=NCBI_GP:TGD60073.1;Name=TGD60073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456902.1;locus_tag=C9F07_19485;product=diaminopimelate decarboxylase;protein_id=TGD60073.1;transl_table=11 ##sequence-region PYKI01000019.1 1 1909 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000019.1 Genbank region 1 1909 . + . ID=PYKI01000019.1:1..1909;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000019.1 Genbank gene 1 789 . + . ID=gene-C9F07_00105;Name=C9F07_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00105;partial=true;start_range=.,1 PYKI01000019.1 Protein Homology CDS 1 789 . + 0 ID=cds-TGE30210.1;Parent=gene-C9F07_00105;Dbxref=NCBI_GP:TGE30210.1;Name=TGE30210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455885.1;locus_tag=C9F07_00105;partial=true;product=aminopeptidase;protein_id=TGE30210.1;start_range=.,1;transl_table=11 PYKI01000019.1 Genbank gene 786 1067 . + . ID=gene-C9F07_00110;Name=C9F07_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00110 PYKI01000019.1 Protein Homology CDS 786 1067 . + 0 ID=cds-TGE30211.1;Parent=gene-C9F07_00110;Dbxref=NCBI_GP:TGE30211.1;Name=TGE30211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455884.1;locus_tag=C9F07_00110;product=PTS sugar transporter subunit IIB;protein_id=TGE30211.1;transl_table=11 PYKI01000019.1 Genbank gene 1078 1909 . + . ID=gene-C9F07_00115;Name=C9F07_00115;end_range=1909,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00115;partial=true PYKI01000019.1 Protein Homology CDS 1078 1909 . + 0 ID=cds-TGE30212.1;Parent=gene-C9F07_00115;Dbxref=NCBI_GP:TGE30212.1;Name=TGE30212.1;end_range=1909,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=C9F07_00115;partial=true;product=hypothetical protein;protein_id=TGE30212.1;transl_table=11 ##sequence-region PYKI01002819.1 1 1907 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002819.1 Genbank region 1 1907 . + . ID=PYKI01002819.1:1..1907;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002819.1 Genbank gene 23 1711 . + . ID=gene-C9F07_28210;Name=C9F07_28210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28210 PYKI01002819.1 Protein Homology CDS 23 1711 . + 0 ID=cds-TGD45671.1;Parent=gene-C9F07_28210;Dbxref=NCBI_GP:TGD45671.1;Name=TGD45671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899445.1;locus_tag=C9F07_28210;product=SgrR family transcriptional regulator;protein_id=TGD45671.1;transl_table=11 ##sequence-region PYKI01002841.1 1 1906 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002841.1 Genbank region 1 1906 . + . ID=PYKI01002841.1:1..1906;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002841.1 Genbank gene 1 1304 . + . ID=gene-C9F07_28405;Name=C9F07_28405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28405;partial=true;start_range=.,1 PYKI01002841.1 Protein Homology CDS 1 1304 . + 2 ID=cds-TGD45566.1;Parent=gene-C9F07_28405;Dbxref=NCBI_GP:TGD45566.1;Name=TGD45566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457578.3;locus_tag=C9F07_28405;partial=true;product=outer membrane channel protein TolC;protein_id=TGD45566.1;start_range=.,1;transl_table=11 PYKI01002841.1 Genbank pseudogene 1377 1629 . + . ID=gene-C9F07_28410;Name=C9F07_28410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28410;pseudo=true PYKI01002841.1 Protein Homology CDS 1377 1629 . + 0 ID=cds-C9F07_28410;Parent=gene-C9F07_28410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311951.1;locus_tag=C9F07_28410;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002841.1 Genbank gene 1517 1906 . + . ID=gene-C9F07_28415;Name=C9F07_28415;end_range=1906,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28415;partial=true PYKI01002841.1 Protein Homology CDS 1517 1906 . + 0 ID=cds-TGD45567.1;Parent=gene-C9F07_28415;Dbxref=NCBI_GP:TGD45567.1;Name=TGD45567.1;end_range=1906,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457579.1;locus_tag=C9F07_28415;partial=true;product=hypothetical protein;protein_id=TGD45567.1;transl_table=11 ##sequence-region PYKI01003325.1 1 1903 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003325.1 Genbank region 1 1903 . + . ID=PYKI01003325.1:1..1903;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003325.1 Genbank gene 48 971 . + . ID=gene-C9F07_33450;Name=C9F07_33450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33450 PYKI01003325.1 Protein Homology CDS 48 971 . + 0 ID=cds-TGD35926.1;Parent=gene-C9F07_33450;Dbxref=NCBI_GP:TGD35926.1;Name=TGD35926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079399.1;locus_tag=C9F07_33450;product=ATP-dependent helicase;protein_id=TGD35926.1;transl_table=11 PYKI01003325.1 Genbank gene 1001 1903 . + . ID=gene-C9F07_33455;Name=C9F07_33455;end_range=1903,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33455;partial=true PYKI01003325.1 Protein Homology CDS 1001 1903 . + 0 ID=cds-TGD35925.1;Parent=gene-C9F07_33455;Dbxref=NCBI_GP:TGD35925.1;Name=TGD35925.1;end_range=1903,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=C9F07_33455;partial=true;product=DNA-binding protein YbiB;protein_id=TGD35925.1;transl_table=11 ##sequence-region PYKI01001558.1 1 1902 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001558.1 Genbank region 1 1902 . + . ID=PYKI01001558.1:1..1902;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001558.1 Genbank pseudogene 7 369 . - . ID=gene-C9F07_14920;Name=C9F07_14920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_14920;pseudo=true PYKI01001558.1 Protein Homology CDS 7 369 . - 0 ID=cds-C9F07_14920;Parent=gene-C9F07_14920;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458885.1;locus_tag=C9F07_14920;product=YhcH/YjgK/YiaL family protein;pseudo=true;transl_table=11 PYKI01001558.1 Genbank gene 753 944 . - . ID=gene-C9F07_14925;Name=C9F07_14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14925 PYKI01001558.1 Protein Homology CDS 753 944 . - 0 ID=cds-TGD74391.1;Parent=gene-C9F07_14925;Dbxref=NCBI_GP:TGD74391.1;Name=TGD74391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523634.1;locus_tag=C9F07_14925;product=hypothetical protein;protein_id=TGD74391.1;transl_table=11 PYKI01001558.1 Genbank gene 1045 1902 . + . ID=gene-C9F07_14930;Name=C9F07_14930;end_range=1902,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14930;partial=true PYKI01001558.1 Protein Homology CDS 1045 1902 . + 0 ID=cds-TGD74392.1;Parent=gene-C9F07_14930;Dbxref=NCBI_GP:TGD74392.1;Name=TGD74392.1;Note=catalyzes the degradation of arginine to citruline and ammonia;end_range=1902,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=C9F07_14930;partial=true;product=arginine deiminase;protein_id=TGD74392.1;transl_table=11 ##sequence-region PYKI01002069.1 1 1902 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002069.1 Genbank region 1 1902 . + . ID=PYKI01002069.1:1..1902;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002069.1 Genbank gene 1 143 . + . ID=gene-C9F07_20035;Name=C9F07_20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20035;partial=true;start_range=.,1 PYKI01002069.1 Protein Homology CDS 1 143 . + 2 ID=cds-TGD59339.1;Parent=gene-C9F07_20035;Dbxref=NCBI_GP:TGD59339.1;Name=TGD59339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=C9F07_20035;partial=true;product=hydrolase;protein_id=TGD59339.1;start_range=.,1;transl_table=11 PYKI01002069.1 Genbank gene 272 475 . + . ID=gene-C9F07_20040;Name=C9F07_20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20040 PYKI01002069.1 Protein Homology CDS 272 475 . + 0 ID=cds-TGD59340.1;Parent=gene-C9F07_20040;Dbxref=NCBI_GP:TGD59340.1;Name=TGD59340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455208.1;locus_tag=C9F07_20040;product=twin-arginine translocase subunit TatE;protein_id=TGD59340.1;transl_table=11 PYKI01002069.1 Genbank gene 561 1526 . - . ID=gene-C9F07_20045;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=C9F07_20045 PYKI01002069.1 Protein Homology CDS 561 1526 . - 0 ID=cds-TGD59341.1;Parent=gene-C9F07_20045;Dbxref=NCBI_GP:TGD59341.1;Name=TGD59341.1;gbkey=CDS;gene=lipA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=C9F07_20045;product=lipoyl synthase;protein_id=TGD59341.1;transl_table=11 PYKI01002069.1 Genbank pseudogene 1732 1830 . - . ID=gene-C9F07_20050;Name=C9F07_20050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20050;pseudo=true PYKI01002069.1 Protein Homology CDS 1732 1830 . - 0 ID=cds-C9F07_20050;Parent=gene-C9F07_20050;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455210.1;locus_tag=C9F07_20050;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01003513.1 1 4675 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003513.1 Genbank region 1 4675 . + . ID=PYKI01003513.1:1..4675;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003513.1 Genbank gene 18 647 . + . ID=gene-C9F07_35425;Name=C9F07_35425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35425 PYKI01003513.1 Protein Homology CDS 18 647 . + 0 ID=cds-TGD31713.1;Parent=gene-C9F07_35425;Dbxref=NCBI_GP:TGD31713.1;Name=TGD31713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001639200.1;locus_tag=C9F07_35425;product=trimethylamine-N-oxide reductase;protein_id=TGD31713.1;transl_table=11 PYKI01003513.1 Genbank gene 616 1056 . - . ID=gene-C9F07_35430;Name=C9F07_35430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35430 PYKI01003513.1 Protein Homology CDS 616 1056 . - 0 ID=cds-TGD31709.1;Parent=gene-C9F07_35430;Dbxref=NCBI_GP:TGD31709.1;Name=TGD31709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=C9F07_35430;product=N-acetyltransferase;protein_id=TGD31709.1;transl_table=11 PYKI01003513.1 Genbank gene 1034 1615 . - . ID=gene-C9F07_35435;Name=C9F07_35435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35435 PYKI01003513.1 Protein Homology CDS 1034 1615 . - 0 ID=cds-TGD31710.1;Parent=gene-C9F07_35435;Dbxref=NCBI_GP:TGD31710.1;Name=TGD31710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=C9F07_35435;product=DNA-3-methyladenine glycosylase I;protein_id=TGD31710.1;transl_table=11 PYKI01003513.1 Genbank gene 1772 2476 . + . ID=gene-C9F07_35440;Name=C9F07_35440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35440 PYKI01003513.1 Protein Homology CDS 1772 2476 . + 0 ID=cds-TGD31711.1;Parent=gene-C9F07_35440;Dbxref=NCBI_GP:TGD31711.1;Name=TGD31711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458284.1;locus_tag=C9F07_35440;product=autotransporter domain-containing protein;protein_id=TGD31711.1;transl_table=11 PYKI01003513.1 Genbank gene 2707 4398 . + . ID=gene-C9F07_35445;Name=C9F07_35445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35445 PYKI01003513.1 Protein Homology CDS 2707 4398 . + 0 ID=cds-TGD31712.1;Parent=gene-C9F07_35445;Dbxref=NCBI_GP:TGD31712.1;Name=TGD31712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=C9F07_35445;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=TGD31712.1;transl_table=11 PYKI01003513.1 Genbank gene 4489 4565 . + . ID=gene-C9F07_35450;Name=C9F07_35450;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_35450 PYKI01003513.1 tRNAscan-SE tRNA 4489 4565 . + . ID=rna-C9F07_35450;Parent=gene-C9F07_35450;anticodon=(pos:4523..4525);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_35450;product=tRNA-Pro PYKI01003513.1 tRNAscan-SE exon 4489 4565 . + . ID=exon-C9F07_35450-1;Parent=rna-C9F07_35450;anticodon=(pos:4523..4525);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_35450;product=tRNA-Pro ##sequence-region PYKI01003575.1 1 1901 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003575.1 Genbank region 1 1901 . + . ID=PYKI01003575.1:1..1901;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003575.1 Genbank gene 12 761 . - . ID=gene-C9F07_36080;Name=C9F07_36080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36080 PYKI01003575.1 Protein Homology CDS 12 761 . - 0 ID=cds-TGD30228.1;Parent=gene-C9F07_36080;Dbxref=NCBI_GP:TGD30228.1;Name=TGD30228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002412580.1;locus_tag=C9F07_36080;product=antitermination protein;protein_id=TGD30228.1;transl_table=11 PYKI01003575.1 Genbank gene 775 1764 . - . ID=gene-C9F07_36085;Name=C9F07_36085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36085 PYKI01003575.1 Protein Homology CDS 775 1764 . - 0 ID=cds-TGD30230.1;Parent=gene-C9F07_36085;Dbxref=NCBI_GP:TGD30230.1;Name=TGD30230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461183.1;locus_tag=C9F07_36085;product=DUF968 domain-containing protein;protein_id=TGD30230.1;transl_table=11 PYKI01003575.1 Genbank gene 1772 1901 . - . ID=gene-C9F07_36090;Name=C9F07_36090;end_range=1901,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36090;partial=true PYKI01003575.1 Protein Homology CDS 1772 1901 . - 1 ID=cds-TGD30229.1;Parent=gene-C9F07_36090;Dbxref=NCBI_GP:TGD30229.1;Name=TGD30229.1;end_range=1901,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002411630.1;locus_tag=C9F07_36090;partial=true;product=DNA-binding protein;protein_id=TGD30229.1;transl_table=11 ##sequence-region PYKI01000707.1 1 1900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000707.1 Genbank region 1 1900 . + . ID=PYKI01000707.1:1..1900;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000707.1 Genbank gene 1 1221 . + . ID=gene-C9F07_06205;Name=C9F07_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06205;partial=true;start_range=.,1 PYKI01000707.1 Protein Homology CDS 1 1221 . + 0 ID=cds-TGE11306.1;Parent=gene-C9F07_06205;Dbxref=NCBI_GP:TGE11306.1;Name=TGE11306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=C9F07_06205;partial=true;product=alpha-amylase;protein_id=TGE11306.1;start_range=.,1;transl_table=11 PYKI01000707.1 Genbank gene 1395 1900 . + . ID=gene-C9F07_06210;Name=avtA;end_range=1900,.;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=C9F07_06210;partial=true PYKI01000707.1 Protein Homology CDS 1395 1900 . + 0 ID=cds-TGE11307.1;Parent=gene-C9F07_06210;Dbxref=NCBI_GP:TGE11307.1;Name=TGE11307.1;Note=transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis;end_range=1900,.;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458262.1;locus_tag=C9F07_06210;partial=true;product=valine--pyruvate transaminase;protein_id=TGE11307.1;transl_table=11 ##sequence-region PYKI01002641.1 1 1900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002641.1 Genbank region 1 1900 . + . ID=PYKI01002641.1:1..1900;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002641.1 Genbank gene 1 202 . - . ID=gene-C9F07_26310;Name=C9F07_26310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26310;partial=true;start_range=.,1 PYKI01002641.1 GeneMarkS+ CDS 1 202 . - 0 ID=cds-TGD49396.1;Parent=gene-C9F07_26310;Dbxref=NCBI_GP:TGD49396.1;Name=TGD49396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F07_26310;partial=true;product=hypothetical protein;protein_id=TGD49396.1;start_range=.,1;transl_table=11 PYKI01002641.1 Genbank pseudogene 114 1232 . - . ID=gene-C9F07_26315;Name=C9F07_26315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26315;pseudo=true PYKI01002641.1 Protein Homology CDS 114 1232 . - 0 ID=cds-C9F07_26315;Parent=gene-C9F07_26315;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002413963.1;locus_tag=C9F07_26315;product=L-sorbose 1-phosphate reductase;pseudo=true;transl_table=11 PYKI01002641.1 Genbank gene 1256 1900 . - . ID=gene-C9F07_26320;Name=C9F07_26320;end_range=1900,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26320;partial=true PYKI01002641.1 Protein Homology CDS 1256 1900 . - 0 ID=cds-TGD49397.1;Parent=gene-C9F07_26320;Dbxref=NCBI_GP:TGD49397.1;Name=TGD49397.1;Note=CmtA with CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein;end_range=1900,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157435.1;locus_tag=C9F07_26320;partial=true;product=PTS mannitol transporter subunit IIBC;protein_id=TGD49397.1;transl_table=11 ##sequence-region PYKI01002911.1 1 1898 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002911.1 Genbank region 1 1898 . + . ID=PYKI01002911.1:1..1898;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002911.1 Genbank gene 1 1462 . - . ID=gene-C9F07_29150;Name=C9F07_29150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29150;partial=true;start_range=.,1 PYKI01002911.1 Protein Homology CDS 1 1462 . - 0 ID=cds-TGD43417.1;Parent=gene-C9F07_29150;Dbxref=NCBI_GP:TGD43417.1;Name=TGD43417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=C9F07_29150;partial=true;product=APC family amino acid permease;protein_id=TGD43417.1;start_range=.,1;transl_table=11 PYKI01002911.1 Genbank gene 1671 1898 . - . ID=gene-C9F07_29155;Name=C9F07_29155;end_range=1898,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29155;partial=true PYKI01002911.1 Protein Homology CDS 1671 1898 . - 0 ID=cds-TGD43418.1;Parent=gene-C9F07_29155;Dbxref=NCBI_GP:TGD43418.1;Name=TGD43418.1;end_range=1898,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000542983.1;locus_tag=C9F07_29155;partial=true;product=cytoplasmic protein;protein_id=TGD43418.1;transl_table=11 ##sequence-region PYKI01000570.1 1 1897 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000570.1 Genbank region 1 1897 . + . ID=PYKI01000570.1:1..1897;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000570.1 Genbank gene 1 744 . - . ID=gene-C9F07_04815;Name=C9F07_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04815;partial=true;start_range=.,1 PYKI01000570.1 Protein Homology CDS 1 744 . - 0 ID=cds-TGE14600.1;Parent=gene-C9F07_04815;Dbxref=NCBI_GP:TGE14600.1;Name=TGE14600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=C9F07_04815;partial=true;product=dipeptidyl carboxypeptidase II;protein_id=TGE14600.1;start_range=.,1;transl_table=11 PYKI01000570.1 Genbank gene 883 1629 . + . ID=gene-C9F07_04820;Name=C9F07_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04820 PYKI01000570.1 Protein Homology CDS 883 1629 . + 0 ID=cds-TGE14601.1;Parent=gene-C9F07_04820;Dbxref=NCBI_GP:TGE14601.1;Name=TGE14601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455969.1;locus_tag=C9F07_04820;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=TGE14601.1;transl_table=11 PYKI01000570.1 Genbank pseudogene 1759 1839 . + . ID=gene-C9F07_04825;Name=C9F07_04825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_04825;pseudo=true PYKI01000570.1 Protein Homology CDS 1759 1839 . + 0 ID=cds-C9F07_04825;Parent=gene-C9F07_04825;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310176.1;locus_tag=C9F07_04825;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PYKI01001118.1 1 1896 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001118.1 Genbank region 1 1896 . + . ID=PYKI01001118.1:1..1896;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001118.1 Genbank pseudogene 1 782 . + . ID=gene-C9F07_10410;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=pseudogene;locus_tag=C9F07_10410;pseudo=true PYKI01001118.1 Protein Homology CDS 1 782 . + 2 ID=cds-C9F07_10410;Parent=gene-C9F07_10410;Note=hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=apaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454700.1;locus_tag=C9F07_10410;product=diadenosine tetraphosphatase;pseudo=true;transl_table=11 PYKI01001118.1 Genbank gene 888 1367 . - . ID=gene-C9F07_10415;Name=C9F07_10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10415 PYKI01001118.1 Protein Homology CDS 888 1367 . - 0 ID=cds-TGD94944.1;Parent=gene-C9F07_10415;Dbxref=NCBI_GP:TGD94944.1;Name=TGD94944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459092.1;locus_tag=C9F07_10415;product=type 3 dihydrofolate reductase;protein_id=TGD94944.1;transl_table=11 PYKI01001118.1 Genbank gene 1371 1481 . - . ID=gene-C9F07_10420;Name=C9F07_10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10420 PYKI01001118.1 Protein Homology CDS 1371 1481 . - 0 ID=cds-TGD94945.1;Parent=gene-C9F07_10420;Dbxref=NCBI_GP:TGD94945.1;Name=TGD94945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001338230.1;locus_tag=C9F07_10420;product=dihydrofolate reductase;protein_id=TGD94945.1;transl_table=11 PYKI01001118.1 Genbank gene 1566 1896 . - . ID=gene-C9F07_10425;Name=C9F07_10425;end_range=1896,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10425;partial=true PYKI01001118.1 Protein Homology CDS 1566 1896 . - 1 ID=cds-TGD94946.1;Parent=gene-C9F07_10425;Dbxref=NCBI_GP:TGD94946.1;Name=TGD94946.1;Note=transport system that facilitates potassium-efflux;end_range=1896,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=C9F07_10425;partial=true;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=TGD94946.1;transl_table=11 ##sequence-region PYKI01001307.1 1 1894 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001307.1 Genbank region 1 1894 . + . ID=PYKI01001307.1:1..1894;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001307.1 Genbank pseudogene 1 1552 . - . ID=gene-C9F07_12240;Name=C9F07_12240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12240;pseudo=true PYKI01001307.1 Protein Homology CDS 1 1552 . - 0 ID=cds-C9F07_12240;Parent=gene-C9F07_12240;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=C9F07_12240;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000631.1 1 1893 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000631.1 Genbank region 1 1893 . + . ID=PYKI01000631.1:1..1893;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000631.1 Genbank gene 1 1137 . + . ID=gene-C9F07_05440;Name=C9F07_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05440;partial=true;start_range=.,1 PYKI01000631.1 Protein Homology CDS 1 1137 . + 0 ID=cds-TGE13117.1;Parent=gene-C9F07_05440;Dbxref=NCBI_GP:TGE13117.1;Name=TGE13117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455213.1;locus_tag=C9F07_05440;partial=true;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=TGE13117.1;start_range=.,1;transl_table=11 PYKI01000631.1 Genbank gene 1245 1508 . + . ID=gene-C9F07_05445;Name=C9F07_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05445 PYKI01000631.1 Protein Homology CDS 1245 1508 . + 0 ID=cds-TGE13118.1;Parent=gene-C9F07_05445;Dbxref=NCBI_GP:TGE13118.1;Name=TGE13118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455212.1;locus_tag=C9F07_05445;product=hypothetical protein;protein_id=TGE13118.1;transl_table=11 PYKI01000631.1 Genbank gene 1674 1893 . + . ID=gene-C9F07_05450;Name=C9F07_05450;end_range=1893,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05450;partial=true PYKI01000631.1 Protein Homology CDS 1674 1893 . + 0 ID=cds-TGE13119.1;Parent=gene-C9F07_05450;Dbxref=NCBI_GP:TGE13119.1;Name=TGE13119.1;end_range=1893,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455211.3;locus_tag=C9F07_05450;partial=true;product=hypothetical protein;protein_id=TGE13119.1;transl_table=11 ##sequence-region PYKI01002364.1 1 1892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002364.1 Genbank region 1 1892 . + . ID=PYKI01002364.1:1..1892;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002364.1 Genbank gene 1 532 . - . ID=gene-C9F07_23230;Name=C9F07_23230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23230;partial=true;start_range=.,1 PYKI01002364.1 Protein Homology CDS 1 532 . - 0 ID=cds-TGD52946.1;Parent=gene-C9F07_23230;Dbxref=NCBI_GP:TGD52946.1;Name=TGD52946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455575.1;locus_tag=C9F07_23230;partial=true;product=hypothetical protein;protein_id=TGD52946.1;start_range=.,1;transl_table=11 PYKI01002364.1 Genbank gene 703 1119 . + . ID=gene-C9F07_23235;Name=C9F07_23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23235 PYKI01002364.1 Protein Homology CDS 703 1119 . + 0 ID=cds-TGD52947.1;Parent=gene-C9F07_23235;Dbxref=NCBI_GP:TGD52947.1;Name=TGD52947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455576.1;locus_tag=C9F07_23235;product=CoA-binding protein;protein_id=TGD52947.1;transl_table=11 PYKI01002364.1 Genbank gene 1164 1481 . - . ID=gene-C9F07_23240;Name=C9F07_23240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23240 PYKI01002364.1 Protein Homology CDS 1164 1481 . - 0 ID=cds-TGD52948.1;Parent=gene-C9F07_23240;Dbxref=NCBI_GP:TGD52948.1;Name=TGD52948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455577.1;locus_tag=C9F07_23240;product=heat shock protein HspQ;protein_id=TGD52948.1;transl_table=11 PYKI01002364.1 Genbank gene 1539 1892 . - . ID=gene-C9F07_23245;Name=C9F07_23245;end_range=1892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23245;partial=true PYKI01002364.1 Protein Homology CDS 1539 1892 . - 0 ID=cds-TGD52949.1;Parent=gene-C9F07_23245;Dbxref=NCBI_GP:TGD52949.1;Name=TGD52949.1;end_range=1892,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455578.1;locus_tag=C9F07_23245;partial=true;product=hypothetical protein;protein_id=TGD52949.1;transl_table=11 ##sequence-region PYKI01002233.1 1 4656 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002233.1 Genbank region 1 4656 . + . ID=PYKI01002233.1:1..4656;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002233.1 Genbank gene 1 1702 . - . ID=gene-C9F07_21790;Name=C9F07_21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21790;partial=true;start_range=.,1 PYKI01002233.1 Protein Homology CDS 1 1702 . - 0 ID=cds-TGD56189.1;Parent=gene-C9F07_21790;Dbxref=NCBI_GP:TGD56189.1;Name=TGD56189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457388.1;locus_tag=C9F07_21790;partial=true;product=pitrilysin;protein_id=TGD56189.1;start_range=.,1;transl_table=11 PYKI01002233.1 Genbank pseudogene 1880 4633 . - . ID=gene-C9F07_21795;Name=C9F07_21795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21795;pseudo=true PYKI01002233.1 Protein Homology CDS 1880 4633 . - 0 ID=cds-C9F07_21795;Parent=gene-C9F07_21795;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457389.1;locus_tag=C9F07_21795;product=exodeoxyribonuclease V subunit gamma;pseudo=true;transl_table=11 ##sequence-region PYKI01001876.1 1 1892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001876.1 Genbank region 1 1892 . + . ID=PYKI01001876.1:1..1892;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001876.1 Genbank gene 107 523 . - . ID=gene-C9F07_18070;Name=C9F07_18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18070 PYKI01001876.1 Protein Homology CDS 107 523 . - 0 ID=cds-TGD62425.1;Parent=gene-C9F07_18070;Dbxref=NCBI_GP:TGD62425.1;Name=TGD62425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=C9F07_18070;product=Holliday junction resolvase RuvX;protein_id=TGD62425.1;transl_table=11 PYKI01001876.1 Genbank gene 523 1086 . - . ID=gene-C9F07_18075;Name=C9F07_18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18075 PYKI01001876.1 Protein Homology CDS 523 1086 . - 0 ID=cds-TGD62426.1;Parent=gene-C9F07_18075;Dbxref=NCBI_GP:TGD62426.1;Name=TGD62426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462012.1;locus_tag=C9F07_18075;product=YqgE/AlgH family protein;protein_id=TGD62426.1;transl_table=11 PYKI01001876.1 Genbank pseudogene 1302 1892 . - . ID=gene-C9F07_18080;Name=C9F07_18080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18080;pseudo=true PYKI01001876.1 Protein Homology CDS 1302 1892 . - 0 ID=cds-C9F07_18080;Parent=gene-C9F07_18080;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457487.1;locus_tag=C9F07_18080;product=glutathione synthase;pseudo=true;transl_table=11 ##sequence-region PYKI01001934.1 1 1890 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001934.1 Genbank region 1 1890 . + . ID=PYKI01001934.1:1..1890;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001934.1 Genbank gene 1 271 . + . ID=gene-C9F07_18650;Name=C9F07_18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18650;partial=true;start_range=.,1 PYKI01001934.1 Protein Homology CDS 1 271 . + 1 ID=cds-TGD60749.1;Parent=gene-C9F07_18650;Dbxref=NCBI_GP:TGD60749.1;Name=TGD60749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003841701.1;locus_tag=C9F07_18650;partial=true;product=hypothetical protein;protein_id=TGD60749.1;start_range=.,1;transl_table=11 PYKI01001934.1 Genbank gene 271 855 . + . ID=gene-C9F07_18655;Name=C9F07_18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18655 PYKI01001934.1 Protein Homology CDS 271 855 . + 0 ID=cds-TGD60750.1;Parent=gene-C9F07_18655;Dbxref=NCBI_GP:TGD60750.1;Name=TGD60750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150472.1;locus_tag=C9F07_18655;product=hypothetical protein;protein_id=TGD60750.1;transl_table=11 PYKI01001934.1 Genbank gene 862 1260 . + . ID=gene-C9F07_18660;Name=C9F07_18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18660 PYKI01001934.1 Protein Homology CDS 862 1260 . + 0 ID=cds-TGD60751.1;Parent=gene-C9F07_18660;Dbxref=NCBI_GP:TGD60751.1;Name=TGD60751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150471.1;locus_tag=C9F07_18660;product=hypothetical protein;protein_id=TGD60751.1;transl_table=11 PYKI01001934.1 Genbank gene 1260 1890 . + . ID=gene-C9F07_18665;Name=C9F07_18665;end_range=1890,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18665;partial=true PYKI01001934.1 Protein Homology CDS 1260 1890 . + 0 ID=cds-TGD60752.1;Parent=gene-C9F07_18665;Dbxref=NCBI_GP:TGD60752.1;Name=TGD60752.1;end_range=1890,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150470.1;locus_tag=C9F07_18665;partial=true;product=phage tail protein;protein_id=TGD60752.1;transl_table=11 ##sequence-region PYKI01001597.1 1 1890 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001597.1 Genbank region 1 1890 . + . ID=PYKI01001597.1:1..1890;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001597.1 Genbank gene 1 576 . - . ID=gene-C9F07_15250;Name=C9F07_15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15250;partial=true;start_range=.,1 PYKI01001597.1 Protein Homology CDS 1 576 . - 0 ID=cds-TGD71635.1;Parent=gene-C9F07_15250;Dbxref=NCBI_GP:TGD71635.1;Name=TGD71635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=C9F07_15250;partial=true;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=TGD71635.1;start_range=.,1;transl_table=11 PYKI01001597.1 Genbank gene 663 1890 . - . ID=gene-C9F07_15255;Name=wzc;end_range=1890,.;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=C9F07_15255;partial=true PYKI01001597.1 Protein Homology CDS 663 1890 . - 1 ID=cds-TGD71636.1;Parent=gene-C9F07_15255;Dbxref=NCBI_GP:TGD71636.1;Name=TGD71636.1;end_range=1890,.;gbkey=CDS;gene=wzc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=C9F07_15255;partial=true;product=tyrosine-protein kinase Wzc;protein_id=TGD71636.1;transl_table=11 ##sequence-region PYKI01000830.1 1 1889 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000830.1 Genbank region 1 1889 . + . ID=PYKI01000830.1:1..1889;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000830.1 Genbank gene 1 439 . - . ID=gene-C9F07_07570;Name=C9F07_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07570;partial=true;start_range=.,1 PYKI01000830.1 Protein Homology CDS 1 439 . - 0 ID=cds-TGE07225.1;Parent=gene-C9F07_07570;Dbxref=NCBI_GP:TGE07225.1;Name=TGE07225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457003.1;locus_tag=C9F07_07570;partial=true;product=ethanolamine utilization protein EutP;protein_id=TGE07225.1;start_range=.,1;transl_table=11 PYKI01000830.1 Genbank gene 452 787 . - . ID=gene-C9F07_07575;Name=C9F07_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07575 PYKI01000830.1 Protein Homology CDS 452 787 . - 0 ID=cds-TGE07226.1;Parent=gene-C9F07_07575;Dbxref=NCBI_GP:TGE07226.1;Name=TGE07226.1;Note=ethanolamine utilization protein%3B involved in the degredation of ethanolamine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=C9F07_07575;product=ethanolamine utilization protein EutS;protein_id=TGE07226.1;transl_table=11 PYKI01000830.1 Genbank gene 1205 1889 . - . ID=gene-C9F07_07580;Name=C9F07_07580;end_range=1889,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07580;partial=true PYKI01000830.1 Protein Homology CDS 1205 1889 . - 1 ID=cds-TGE07227.1;Parent=gene-C9F07_07580;Dbxref=NCBI_GP:TGE07227.1;Name=TGE07227.1;end_range=1889,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457006.1;locus_tag=C9F07_07580;partial=true;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=TGE07227.1;transl_table=11 ##sequence-region PYKI01001104.1 1 1887 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001104.1 Genbank region 1 1887 . + . ID=PYKI01001104.1:1..1887;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001104.1 Genbank gene 74 649 . - . ID=gene-C9F07_10305;Name=C9F07_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10305 PYKI01001104.1 Protein Homology CDS 74 649 . - 0 ID=cds-TGD95159.1;Parent=gene-C9F07_10305;Dbxref=NCBI_GP:TGD95159.1;Name=TGD95159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=C9F07_10305;product=transcriptional regulator;protein_id=TGD95159.1;transl_table=11 PYKI01001104.1 Genbank pseudogene 686 1825 . - . ID=gene-C9F07_10310;Name=dipZ;gbkey=Gene;gene=dipZ;gene_biotype=pseudogene;locus_tag=C9F07_10310;pseudo=true PYKI01001104.1 Protein Homology CDS 686 1825 . - 0 ID=cds-C9F07_10310;Parent=gene-C9F07_10310;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=dipZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=C9F07_10310;product=protein-disulfide reductase DsbD;pseudo=true;transl_table=11 ##sequence-region PYKI01002678.1 1 1878 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002678.1 Genbank region 1 1878 . + . ID=PYKI01002678.1:1..1878;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002678.1 Genbank gene 1 1569 . + . ID=gene-C9F07_26685;Name=C9F07_26685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26685;partial=true;start_range=.,1 PYKI01002678.1 Protein Homology CDS 1 1569 . + 0 ID=cds-TGD48675.1;Parent=gene-C9F07_26685;Dbxref=NCBI_GP:TGD48675.1;Name=TGD48675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455053.1;locus_tag=C9F07_26685;partial=true;product=peptide ABC transporter substrate-binding protein;protein_id=TGD48675.1;start_range=.,1;transl_table=11 PYKI01002678.1 Genbank pseudogene 1634 1804 . + . ID=gene-C9F07_26690;Name=C9F07_26690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_26690;pseudo=true PYKI01002678.1 Protein Homology CDS 1634 1804 . + 0 ID=cds-C9F07_26690;Parent=gene-C9F07_26690;Note=YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0)%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455052.1;locus_tag=C9F07_26690;product=7-cyano-7-deazaguanine synthase QueC;pseudo=true;transl_table=11 ##sequence-region PYKI01000975.1 1 1876 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000975.1 Genbank region 1 1876 . + . ID=PYKI01000975.1:1..1876;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000975.1 Genbank gene 1 1657 . - . ID=gene-C9F07_08895;Name=C9F07_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08895;partial=true;start_range=.,1 PYKI01000975.1 Protein Homology CDS 1 1657 . - 0 ID=cds-TGD99937.1;Parent=gene-C9F07_08895;Dbxref=NCBI_GP:TGD99937.1;Name=TGD99937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=C9F07_08895;partial=true;product=penicillin-binding protein 2;protein_id=TGD99937.1;start_range=.,1;transl_table=11 PYKI01000975.1 Genbank pseudogene 1688 1816 . - . ID=gene-C9F07_08900;Name=C9F07_08900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_08900;pseudo=true PYKI01000975.1 Protein Homology CDS 1688 1816 . - 0 ID=cds-C9F07_08900;Parent=gene-C9F07_08900;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010618862.1;locus_tag=C9F07_08900;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;pseudo=true;transl_table=11 ##sequence-region PYKI01002499.1 1 1874 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002499.1 Genbank region 1 1874 . + . ID=PYKI01002499.1:1..1874;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002499.1 Genbank gene 1 545 . - . ID=gene-C9F07_24715;Name=C9F07_24715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24715;partial=true;start_range=.,1 PYKI01002499.1 Protein Homology CDS 1 545 . - 0 ID=cds-TGD50293.1;Parent=gene-C9F07_24715;Dbxref=NCBI_GP:TGD50293.1;Name=TGD50293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458294.1;locus_tag=C9F07_24715;partial=true;product=transporter;protein_id=TGD50293.1;start_range=.,1;transl_table=11 PYKI01002499.1 Genbank pseudogene 663 1060 . - . ID=gene-C9F07_24720;Name=C9F07_24720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_24720;pseudo=true PYKI01002499.1 Protein Homology CDS 663 1060 . - 0 ID=cds-C9F07_24720;Parent=gene-C9F07_24720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006793643.1;locus_tag=C9F07_24720;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002499.1 Genbank gene 1165 1296 . + . ID=gene-C9F07_24725;Name=C9F07_24725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24725 PYKI01002499.1 Protein Homology CDS 1165 1296 . + 0 ID=cds-TGD50294.1;Parent=gene-C9F07_24725;Dbxref=NCBI_GP:TGD50294.1;Name=TGD50294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458295.1;locus_tag=C9F07_24725;product=small toxic polypeptide ldrD (Modular protein);protein_id=TGD50294.1;transl_table=11 PYKI01002499.1 Genbank gene 1377 1874 . - . ID=gene-C9F07_24730;Name=bcsG;end_range=1874,.;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=C9F07_24730;partial=true PYKI01002499.1 Protein Homology CDS 1377 1874 . - 0 ID=cds-TGD50295.1;Parent=gene-C9F07_24730;Dbxref=NCBI_GP:TGD50295.1;Name=TGD50295.1;end_range=1874,.;gbkey=CDS;gene=bcsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458296.1;locus_tag=C9F07_24730;partial=true;product=cellulose biosynthesis protein BcsG;protein_id=TGD50295.1;transl_table=11 ##sequence-region PYKI01001444.1 1 1872 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001444.1 Genbank region 1 1872 . + . ID=PYKI01001444.1:1..1872;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001444.1 Genbank gene 1 183 . - . ID=gene-C9F07_13665;Name=C9F07_13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13665;partial=true;start_range=.,1 PYKI01001444.1 Protein Homology CDS 1 183 . - 0 ID=cds-TGD83683.1;Parent=gene-C9F07_13665;Dbxref=NCBI_GP:TGD83683.1;Name=TGD83683.1;Note=ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456169.1;locus_tag=C9F07_13665;partial=true;product=vitamin B12-transporter ATPase;protein_id=TGD83683.1;start_range=.,1;transl_table=11 PYKI01001444.1 Genbank gene 183 734 . - . ID=gene-C9F07_13670;Name=C9F07_13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13670 PYKI01001444.1 Protein Homology CDS 183 734 . - 0 ID=cds-TGD83684.1;Parent=gene-C9F07_13670;Dbxref=NCBI_GP:TGD83684.1;Name=TGD83684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456170.1;locus_tag=C9F07_13670;product=glutathione peroxidase;protein_id=TGD83684.1;transl_table=11 PYKI01001444.1 Genbank gene 826 1806 . - . ID=gene-C9F07_13675;Name=C9F07_13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13675 PYKI01001444.1 Protein Homology CDS 826 1806 . - 0 ID=cds-TGD83685.1;Parent=gene-C9F07_13675;Dbxref=NCBI_GP:TGD83685.1;Name=TGD83685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=C9F07_13675;product=vitamin B12 ABC transporter permease BtuC;protein_id=TGD83685.1;transl_table=11 ##sequence-region PYKI01000644.1 1 1871 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000644.1 Genbank region 1 1871 . + . ID=PYKI01000644.1:1..1871;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000644.1 Genbank pseudogene 50 1117 . - . ID=gene-C9F07_05570;Name=C9F07_05570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05570;pseudo=true PYKI01000644.1 Protein Homology CDS 50 1117 . - 0 ID=cds-C9F07_05570;Parent=gene-C9F07_05570;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000763887.1;locus_tag=C9F07_05570;product=helicase;pseudo=true;transl_table=11 PYKI01000644.1 Genbank gene 1107 1871 . - . ID=gene-C9F07_05575;Name=C9F07_05575;end_range=1871,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05575;partial=true PYKI01000644.1 Protein Homology CDS 1107 1871 . - 0 ID=cds-TGE12606.1;Parent=gene-C9F07_05575;Dbxref=NCBI_GP:TGE12606.1;Name=TGE12606.1;end_range=1871,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933952.1;locus_tag=C9F07_05575;partial=true;product=hypothetical protein;protein_id=TGE12606.1;transl_table=11 ##sequence-region PYKI01002858.1 1 4653 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002858.1 Genbank region 1 4653 . + . ID=PYKI01002858.1:1..4653;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002858.1 Genbank pseudogene 50 922 . - . ID=gene-C9F07_28610;Name=C9F07_28610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28610;pseudo=true PYKI01002858.1 Protein Homology CDS 50 922 . - 0 ID=cds-C9F07_28610;Parent=gene-C9F07_28610;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310942.1;locus_tag=C9F07_28610;product=fimbrial assembly protein;pseudo=true;transl_table=11 PYKI01002858.1 Genbank gene 935 1615 . - . ID=gene-C9F07_28615;Name=C9F07_28615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28615 PYKI01002858.1 Protein Homology CDS 935 1615 . - 0 ID=cds-TGD44985.1;Parent=gene-C9F07_28615;Dbxref=NCBI_GP:TGD44985.1;Name=TGD44985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734581.1;locus_tag=C9F07_28615;product=molecular chaperone;protein_id=TGD44985.1;transl_table=11 PYKI01002858.1 Genbank gene 1662 2207 . - . ID=gene-C9F07_28620;Name=C9F07_28620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28620 PYKI01002858.1 Protein Homology CDS 1662 2207 . - 0 ID=cds-TGD44986.1;Parent=gene-C9F07_28620;Dbxref=NCBI_GP:TGD44986.1;Name=TGD44986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830494.1;locus_tag=C9F07_28620;product=fimbrial protein;protein_id=TGD44986.1;transl_table=11 PYKI01002858.1 Genbank gene 2486 2767 . - . ID=gene-C9F07_28625;Name=C9F07_28625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28625 PYKI01002858.1 Protein Homology CDS 2486 2767 . - 0 ID=cds-TGD44988.1;Parent=gene-C9F07_28625;Dbxref=NCBI_GP:TGD44988.1;Name=TGD44988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003844376.1;locus_tag=C9F07_28625;product=DUF2574 domain-containing protein;protein_id=TGD44988.1;transl_table=11 PYKI01002858.1 Genbank pseudogene 3034 4143 . - . ID=gene-C9F07_28630;Name=C9F07_28630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28630;pseudo=true PYKI01002858.1 Protein Homology CDS 3034 4143 . - 0 ID=cds-C9F07_28630;Parent=gene-C9F07_28630;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=C9F07_28630;product=iron-sulfur cluster carrier protein ApbC;pseudo=true;transl_table=11 PYKI01002858.1 Genbank gene 4308 4653 . + . ID=gene-C9F07_28635;Name=metG;end_range=4653,.;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=C9F07_28635;partial=true PYKI01002858.1 Protein Homology CDS 4308 4653 . + 0 ID=cds-TGD44987.1;Parent=gene-C9F07_28635;Dbxref=NCBI_GP:TGD44987.1;Name=TGD44987.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;end_range=4653,.;gbkey=CDS;gene=metG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456714.1;locus_tag=C9F07_28635;partial=true;product=methionine--tRNA ligase;protein_id=TGD44987.1;transl_table=11 ##sequence-region PYKI01000843.1 1 1867 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000843.1 Genbank region 1 1867 . + . ID=PYKI01000843.1:1..1867;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000843.1 Genbank gene 1 997 . - . ID=gene-C9F07_07685;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=C9F07_07685;partial=true;start_range=.,1 PYKI01000843.1 Protein Homology CDS 1 997 . - 0 ID=cds-TGE06979.1;Parent=gene-C9F07_07685;Dbxref=NCBI_GP:TGE06979.1;Name=TGE06979.1;Note=polymerizes uridine 5'-diphosphate glucose to cellulose%3B acts with BcsB%2C BcsZ and BcsC in cellulose biosynthesis;gbkey=CDS;gene=bcsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=C9F07_07685;partial=true;product=UDP-forming cellulose synthase catalytic subunit;protein_id=TGE06979.1;start_range=.,1;transl_table=11 PYKI01000843.1 Genbank gene 994 1746 . - . ID=gene-C9F07_07690;Name=C9F07_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07690 PYKI01000843.1 Protein Homology CDS 994 1746 . - 0 ID=cds-TGE06980.1;Parent=gene-C9F07_07690;Dbxref=NCBI_GP:TGE06980.1;Name=TGE06980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=C9F07_07690;product=cellulose biosynthesis protein BcsQ;protein_id=TGE06980.1;transl_table=11 ##sequence-region PYKI01003503.1 1 1864 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003503.1 Genbank region 1 1864 . + . ID=PYKI01003503.1:1..1864;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003503.1 Genbank gene 99 212 . + . ID=gene-C9F07_35280;Name=C9F07_35280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35280 PYKI01003503.1 Protein Homology CDS 99 212 . + 0 ID=cds-TGD31912.1;Parent=gene-C9F07_35280;Dbxref=NCBI_GP:TGD31912.1;Name=TGD31912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455652.1;locus_tag=C9F07_35280;product=DUF2770 domain-containing protein;protein_id=TGD31912.1;transl_table=11 PYKI01003503.1 Genbank gene 266 463 . - . ID=gene-C9F07_35285;Name=C9F07_35285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35285 PYKI01003503.1 Protein Homology CDS 266 463 . - 0 ID=cds-TGD31913.1;Parent=gene-C9F07_35285;Dbxref=NCBI_GP:TGD31913.1;Name=TGD31913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519430.1;locus_tag=C9F07_35285;product=hypothetical protein;protein_id=TGD31913.1;transl_table=11 PYKI01003503.1 Genbank gene 474 1046 . + . ID=gene-C9F07_35290;Name=C9F07_35290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35290 PYKI01003503.1 Protein Homology CDS 474 1046 . + 0 ID=cds-TGD31916.1;Parent=gene-C9F07_35290;Dbxref=NCBI_GP:TGD31916.1;Name=TGD31916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=C9F07_35290;product=cytochrome B;protein_id=TGD31916.1;transl_table=11 PYKI01003503.1 Genbank gene 1043 1618 . + . ID=gene-C9F07_35295;Name=C9F07_35295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35295 PYKI01003503.1 Protein Homology CDS 1043 1618 . + 0 ID=cds-TGD31914.1;Parent=gene-C9F07_35295;Dbxref=NCBI_GP:TGD31914.1;Name=TGD31914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455651.1;locus_tag=C9F07_35295;product=YceI family protein;protein_id=TGD31914.1;transl_table=11 PYKI01003503.1 Genbank gene 1670 1864 . - . ID=gene-C9F07_35300;Name=C9F07_35300;end_range=1864,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35300;partial=true PYKI01003503.1 Protein Homology CDS 1670 1864 . - 0 ID=cds-TGD31915.1;Parent=gene-C9F07_35300;Dbxref=NCBI_GP:TGD31915.1;Name=TGD31915.1;end_range=1864,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455650.1;locus_tag=C9F07_35300;partial=true;product=hypothetical protein;protein_id=TGD31915.1;transl_table=11 ##sequence-region PYKI01003501.1 1 1862 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003501.1 Genbank region 1 1862 . + . ID=PYKI01003501.1:1..1862;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003501.1 Genbank gene 1 438 . + . ID=gene-C9F07_35240;Name=C9F07_35240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35240 PYKI01003501.1 Protein Homology CDS 1 438 . + 0 ID=cds-TGD31923.1;Parent=gene-C9F07_35240;Dbxref=NCBI_GP:TGD31923.1;Name=TGD31923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507067.1;locus_tag=C9F07_35240;product=type VI secretion system tube protein Hcp;protein_id=TGD31923.1;transl_table=11 PYKI01003501.1 Genbank gene 742 1227 . + . ID=gene-C9F07_35245;Name=C9F07_35245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35245 PYKI01003501.1 Protein Homology CDS 742 1227 . + 0 ID=cds-TGD31924.1;Parent=gene-C9F07_35245;Dbxref=NCBI_GP:TGD31924.1;Name=TGD31924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459275.1;locus_tag=C9F07_35245;product=hypothetical protein;protein_id=TGD31924.1;transl_table=11 PYKI01003501.1 Genbank gene 1212 1595 . + . ID=gene-C9F07_35250;Name=C9F07_35250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35250 PYKI01003501.1 Protein Homology CDS 1212 1595 . + 0 ID=cds-TGD31925.1;Parent=gene-C9F07_35250;Dbxref=NCBI_GP:TGD31925.1;Name=TGD31925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459276.1;locus_tag=C9F07_35250;product=hypothetical protein;protein_id=TGD31925.1;transl_table=11 PYKI01003501.1 Genbank gene 1738 1862 . + . ID=gene-C9F07_35255;Name=C9F07_35255;end_range=1862,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35255;partial=true PYKI01003501.1 Protein Homology CDS 1738 1862 . + 0 ID=cds-TGD31926.1;Parent=gene-C9F07_35255;Dbxref=NCBI_GP:TGD31926.1;Name=TGD31926.1;end_range=1862,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459277.1;locus_tag=C9F07_35255;partial=true;product=type VI secretion system tube protein Hcp;protein_id=TGD31926.1;transl_table=11 ##sequence-region PYKI01002675.1 1 1861 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002675.1 Genbank region 1 1861 . + . ID=PYKI01002675.1:1..1861;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002675.1 Genbank gene 316 1224 . + . ID=gene-C9F07_26655;Name=C9F07_26655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26655 PYKI01002675.1 Protein Homology CDS 316 1224 . + 0 ID=cds-TGD48815.1;Parent=gene-C9F07_26655;Dbxref=NCBI_GP:TGD48815.1;Name=TGD48815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000649288.1;locus_tag=C9F07_26655;product=hypothetical protein;protein_id=TGD48815.1;transl_table=11 PYKI01002675.1 Genbank gene 1279 1861 . + . ID=gene-C9F07_26660;Name=C9F07_26660;end_range=1861,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26660;partial=true PYKI01002675.1 Protein Homology CDS 1279 1861 . + 0 ID=cds-TGD48816.1;Parent=gene-C9F07_26660;Dbxref=NCBI_GP:TGD48816.1;Name=TGD48816.1;end_range=1861,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000680564.1;locus_tag=C9F07_26660;partial=true;product=hypothetical protein;protein_id=TGD48816.1;transl_table=11 ##sequence-region PYKI01003217.1 1 1860 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003217.1 Genbank region 1 1860 . + . ID=PYKI01003217.1:1..1860;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003217.1 Genbank gene 1 794 . - . ID=gene-C9F07_32375;Name=C9F07_32375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32375;partial=true;start_range=.,1 PYKI01003217.1 Protein Homology CDS 1 794 . - 0 ID=cds-TGD36846.1;Parent=gene-C9F07_32375;Dbxref=NCBI_GP:TGD36846.1;Name=TGD36846.1;Note=CmtA with CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311835.1;locus_tag=C9F07_32375;partial=true;product=PTS mannitol transporter subunit IIBC;protein_id=TGD36846.1;start_range=.,1;transl_table=11 PYKI01003217.1 Genbank gene 822 1265 . - . ID=gene-C9F07_32380;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=C9F07_32380 PYKI01003217.1 Protein Homology CDS 822 1265 . - 0 ID=cds-TGD36847.1;Parent=gene-C9F07_32380;Dbxref=NCBI_GP:TGD36847.1;Name=TGD36847.1;Note=TolM%3B with CmtA (IIBC)%2C CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein;gbkey=CDS;gene=cmtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178409.1;locus_tag=C9F07_32380;product=PTS mannitol transporter subunit IIA;protein_id=TGD36847.1;transl_table=11 PYKI01003217.1 Genbank pseudogene 1531 1620 . + . ID=gene-C9F07_32385;Name=C9F07_32385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32385;pseudo=true PYKI01003217.1 Protein Homology CDS 1531 1620 . + 0 ID=cds-C9F07_32385;Parent=gene-C9F07_32385;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675610.1;locus_tag=C9F07_32385;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 PYKI01003217.1 Genbank gene 1577 1860 . - . ID=gene-C9F07_32390;Name=C9F07_32390;end_range=1860,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32390;partial=true PYKI01003217.1 Protein Homology CDS 1577 1860 . - 2 ID=cds-TGD36848.1;Parent=gene-C9F07_32390;Dbxref=NCBI_GP:TGD36848.1;Name=TGD36848.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;end_range=1860,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457476.1;locus_tag=C9F07_32390;partial=true;product=transketolase;protein_id=TGD36848.1;transl_table=11 ##sequence-region PYKI01003230.1 1 1859 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003230.1 Genbank region 1 1859 . + . ID=PYKI01003230.1:1..1859;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003230.1 Genbank gene 1 241 . - . ID=gene-C9F07_32520;Name=C9F07_32520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32520;partial=true;start_range=.,1 PYKI01003230.1 Protein Homology CDS 1 241 . - 0 ID=cds-TGD36565.1;Parent=gene-C9F07_32520;Dbxref=NCBI_GP:TGD36565.1;Name=TGD36565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457474.1;locus_tag=C9F07_32520;partial=true;product=ABC transporter ATP-binding protein;protein_id=TGD36565.1;start_range=.,1;transl_table=11 PYKI01003230.1 Genbank pseudogene 235 918 . - . ID=gene-C9F07_32525;Name=C9F07_32525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32525;pseudo=true PYKI01003230.1 Protein Homology CDS 235 918 . - 0 ID=cds-C9F07_32525;Parent=gene-C9F07_32525;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457473.1;locus_tag=C9F07_32525;product=cobalt ABC transporter ATP-binding protein;pseudo=true;transl_table=11 PYKI01003230.1 Genbank gene 900 1607 . - . ID=gene-C9F07_32530;Name=C9F07_32530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32530 PYKI01003230.1 Protein Homology CDS 900 1607 . - 0 ID=cds-TGD36566.1;Parent=gene-C9F07_32530;Dbxref=NCBI_GP:TGD36566.1;Name=TGD36566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=C9F07_32530;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=TGD36566.1;transl_table=11 PYKI01003230.1 Genbank pseudogene 1608 1775 . - . ID=gene-C9F07_32535;Name=C9F07_32535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32535;pseudo=true PYKI01003230.1 Protein Homology CDS 1608 1775 . - 0 ID=cds-C9F07_32535;Parent=gene-C9F07_32535;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457471.1;locus_tag=C9F07_32535;product=ECF transporter S component;pseudo=true;transl_table=11 ##sequence-region PYKI01001901.1 1 1858 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001901.1 Genbank region 1 1858 . + . ID=PYKI01001901.1:1..1858;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001901.1 Genbank gene 1 147 . + . ID=gene-C9F07_18310;Name=C9F07_18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18310;partial=true;start_range=.,1 PYKI01001901.1 Protein Homology CDS 1 147 . + 0 ID=cds-TGD61482.1;Parent=gene-C9F07_18310;Dbxref=NCBI_GP:TGD61482.1;Name=TGD61482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459886.1;locus_tag=C9F07_18310;partial=true;product=DNA breaking-rejoining protein;protein_id=TGD61482.1;start_range=.,1;transl_table=11 PYKI01001901.1 Genbank pseudogene 134 701 . + . ID=gene-C9F07_18315;Name=C9F07_18315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18315;pseudo=true PYKI01001901.1 Protein Homology CDS 134 701 . + 0 ID=cds-C9F07_18315;Parent=gene-C9F07_18315;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459887.1;locus_tag=C9F07_18315;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001901.1 Genbank gene 700 1858 . + . ID=gene-C9F07_18320;Name=C9F07_18320;end_range=1858,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18320;partial=true PYKI01001901.1 Protein Homology CDS 700 1858 . + 0 ID=cds-TGD61483.1;Parent=gene-C9F07_18320;Dbxref=NCBI_GP:TGD61483.1;Name=TGD61483.1;end_range=1858,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667121.1;locus_tag=C9F07_18320;partial=true;product=shikimate transporter;protein_id=TGD61483.1;transl_table=11 ##sequence-region PYKI01001719.1 1 1857 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001719.1 Genbank region 1 1857 . + . ID=PYKI01001719.1:1..1857;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001719.1 Genbank gene 145 363 . + . ID=gene-C9F07_16440;Name=C9F07_16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16440 PYKI01001719.1 Protein Homology CDS 145 363 . + 0 ID=cds-TGD69085.1;Parent=gene-C9F07_16440;Dbxref=NCBI_GP:TGD69085.1;Name=TGD69085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835219.1;locus_tag=C9F07_16440;product=DUF2732 domain-containing protein;protein_id=TGD69085.1;transl_table=11 PYKI01001719.1 Genbank gene 356 583 . + . ID=gene-C9F07_16445;Name=C9F07_16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16445 PYKI01001719.1 Protein Homology CDS 356 583 . + 0 ID=cds-TGD69086.1;Parent=gene-C9F07_16445;Dbxref=NCBI_GP:TGD69086.1;Name=TGD69086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458718.1;locus_tag=C9F07_16445;product=hypothetical protein;protein_id=TGD69086.1;transl_table=11 PYKI01001719.1 Genbank gene 580 903 . + . ID=gene-C9F07_16450;Name=C9F07_16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16450 PYKI01001719.1 Protein Homology CDS 580 903 . + 0 ID=cds-TGD69087.1;Parent=gene-C9F07_16450;Dbxref=NCBI_GP:TGD69087.1;Name=TGD69087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817406.1;locus_tag=C9F07_16450;product=DUF3850 domain-containing protein;protein_id=TGD69087.1;transl_table=11 PYKI01001719.1 Genbank pseudogene 872 1804 . + . ID=gene-C9F07_16455;Name=C9F07_16455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_16455;pseudo=true PYKI01001719.1 Protein Homology CDS 872 1804 . + 0 ID=cds-C9F07_16455;Parent=gene-C9F07_16455;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104123.1;locus_tag=C9F07_16455;product=DNA adenine methylase;pseudo=true;transl_table=11 ##sequence-region PYKI01003225.1 1 4611 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003225.1 Genbank region 1 4611 . + . ID=PYKI01003225.1:1..4611;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003225.1 Genbank gene 1 937 . - . ID=gene-C9F07_32460;Name=C9F07_32460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32460;partial=true;start_range=.,1 PYKI01003225.1 Protein Homology CDS 1 937 . - 0 ID=cds-TGD36679.1;Parent=gene-C9F07_32460;Dbxref=NCBI_GP:TGD36679.1;Name=TGD36679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=C9F07_32460;partial=true;product=MFS transporter;protein_id=TGD36679.1;start_range=.,1;transl_table=11 PYKI01003225.1 Genbank gene 1200 1328 . - . ID=gene-C9F07_32465;Name=C9F07_32465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32465 PYKI01003225.1 Protein Homology CDS 1200 1328 . - 0 ID=cds-TGD36684.1;Parent=gene-C9F07_32465;Dbxref=NCBI_GP:TGD36684.1;Name=TGD36684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462951.1;locus_tag=C9F07_32465;product=hypothetical protein;protein_id=TGD36684.1;transl_table=11 PYKI01003225.1 Genbank gene 1338 1502 . - . ID=gene-C9F07_32470;Name=C9F07_32470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32470 PYKI01003225.1 Protein Homology CDS 1338 1502 . - 0 ID=cds-TGD36680.1;Parent=gene-C9F07_32470;Dbxref=NCBI_GP:TGD36680.1;Name=TGD36680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462950.1;locus_tag=C9F07_32470;product=hypothetical protein;protein_id=TGD36680.1;transl_table=11 PYKI01003225.1 Genbank gene 1600 2322 . - . ID=gene-C9F07_32475;Name=C9F07_32475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32475 PYKI01003225.1 Protein Homology CDS 1600 2322 . - 0 ID=cds-TGD36685.1;Parent=gene-C9F07_32475;Dbxref=NCBI_GP:TGD36685.1;Name=TGD36685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457982.1;locus_tag=C9F07_32475;product=GntR family transcriptional regulator;protein_id=TGD36685.1;transl_table=11 PYKI01003225.1 Genbank gene 2385 3425 . - . ID=gene-C9F07_32480;Name=C9F07_32480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32480 PYKI01003225.1 Protein Homology CDS 2385 3425 . - 0 ID=cds-TGD36681.1;Parent=gene-C9F07_32480;Dbxref=NCBI_GP:TGD36681.1;Name=TGD36681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=C9F07_32480;product=ADP-ribosylglycohydrolase family protein;protein_id=TGD36681.1;transl_table=11 PYKI01003225.1 Genbank gene 3435 4394 . - . ID=gene-C9F07_32485;Name=C9F07_32485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32485 PYKI01003225.1 Protein Homology CDS 3435 4394 . - 0 ID=cds-TGD36682.1;Parent=gene-C9F07_32485;Dbxref=NCBI_GP:TGD36682.1;Name=TGD36682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457984.1;locus_tag=C9F07_32485;product=aminoimidazole riboside kinase;protein_id=TGD36682.1;transl_table=11 PYKI01003225.1 Genbank gene 4405 4611 . - . ID=gene-C9F07_32490;Name=C9F07_32490;end_range=4611,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32490;partial=true PYKI01003225.1 Protein Homology CDS 4405 4611 . - 0 ID=cds-TGD36683.1;Parent=gene-C9F07_32490;Dbxref=NCBI_GP:TGD36683.1;Name=TGD36683.1;end_range=4611,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=C9F07_32490;partial=true;product=MFS transporter;protein_id=TGD36683.1;transl_table=11 ##sequence-region PYKI01001271.1 1 1851 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001271.1 Genbank region 1 1851 . + . ID=PYKI01001271.1:1..1851;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001271.1 Genbank gene 1 1111 . - . ID=gene-C9F07_11885;Name=C9F07_11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11885;partial=true;start_range=.,1 PYKI01001271.1 Protein Homology CDS 1 1111 . - 0 ID=cds-TGD88731.1;Parent=gene-C9F07_11885;Dbxref=NCBI_GP:TGD88731.1;Name=TGD88731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=C9F07_11885;partial=true;product=invasin;protein_id=TGD88731.1;start_range=.,1;transl_table=11 PYKI01001271.1 Genbank gene 1288 1641 . + . ID=gene-C9F07_11890;Name=C9F07_11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11890 PYKI01001271.1 Protein Homology CDS 1288 1641 . + 0 ID=cds-TGD88732.1;Parent=gene-C9F07_11890;Dbxref=NCBI_GP:TGD88732.1;Name=TGD88732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455734.1;locus_tag=C9F07_11890;product=hypothetical protein;protein_id=TGD88732.1;transl_table=11 PYKI01001271.1 Genbank gene 1721 1851 . - . ID=gene-C9F07_11895;Name=chaB;end_range=1851,.;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=C9F07_11895;partial=true PYKI01001271.1 Protein Homology CDS 1721 1851 . - 2 ID=cds-TGD88733.1;Parent=gene-C9F07_11895;Dbxref=NCBI_GP:TGD88733.1;Name=TGD88733.1;Note=in Escherichia coli this protein putatively regulates the sodium/proton (also pH-independent calcium/proton) antiporter chaA%3B has weak affinity for calcium and magnesium ions;end_range=1851,.;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455733.1;locus_tag=C9F07_11895;partial=true;product=cation transport regulator;protein_id=TGD88733.1;transl_table=11 ##sequence-region PYKI01001020.1 1 1848 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001020.1 Genbank region 1 1848 . + . ID=PYKI01001020.1:1..1848;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001020.1 Genbank gene 168 1490 . - . ID=gene-C9F07_09375;Name=C9F07_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09375 PYKI01001020.1 Protein Homology CDS 168 1490 . - 0 ID=cds-TGD97528.1;Parent=gene-C9F07_09375;Dbxref=NCBI_GP:TGD97528.1;Name=TGD97528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458310.1;locus_tag=C9F07_09375;product=MFS transporter;protein_id=TGD97528.1;transl_table=11 ##sequence-region PYKI01000061.1 1 1848 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000061.1 Genbank region 1 1848 . + . ID=PYKI01000061.1:1..1848;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000061.1 Genbank gene 1 519 . - . ID=gene-C9F07_00365;Name=C9F07_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00365;partial=true;start_range=.,1 PYKI01000061.1 Protein Homology CDS 1 519 . - 0 ID=cds-TGE30177.1;Parent=gene-C9F07_00365;Dbxref=NCBI_GP:TGE30177.1;Name=TGE30177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=C9F07_00365;partial=true;product=hypothetical protein;protein_id=TGE30177.1;start_range=.,1;transl_table=11 PYKI01000061.1 Genbank gene 561 1145 . + . ID=gene-C9F07_00370;Name=C9F07_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00370 PYKI01000061.1 Protein Homology CDS 561 1145 . + 0 ID=cds-TGE30175.1;Parent=gene-C9F07_00370;Dbxref=NCBI_GP:TGE30175.1;Name=TGE30175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460803.1;locus_tag=C9F07_00370;product=GAF domain-containing protein;protein_id=TGE30175.1;transl_table=11 PYKI01000061.1 Genbank gene 1243 1848 . + . ID=gene-C9F07_00375;Name=C9F07_00375;end_range=1848,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_00375;partial=true PYKI01000061.1 Protein Homology CDS 1243 1848 . + 0 ID=cds-TGE30176.1;Parent=gene-C9F07_00375;Dbxref=NCBI_GP:TGE30176.1;Name=TGE30176.1;end_range=1848,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456351.1;locus_tag=C9F07_00375;partial=true;product=RNA chaperone ProQ;protein_id=TGE30176.1;transl_table=11 ##sequence-region PYKI01002910.1 1 1844 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002910.1 Genbank region 1 1844 . + . ID=PYKI01002910.1:1..1844;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002910.1 Genbank gene 102 698 . + . ID=gene-C9F07_29140;Name=C9F07_29140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29140 PYKI01002910.1 Protein Homology CDS 102 698 . + 0 ID=cds-TGD43423.1;Parent=gene-C9F07_29140;Dbxref=NCBI_GP:TGD43423.1;Name=TGD43423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000428407.1;locus_tag=C9F07_29140;product=TetR/AcrR family transcriptional regulator;protein_id=TGD43423.1;transl_table=11 PYKI01002910.1 Genbank gene 1011 1844 . + . ID=gene-C9F07_29145;Name=C9F07_29145;end_range=1844,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29145;partial=true PYKI01002910.1 Protein Homology CDS 1011 1844 . + 0 ID=cds-TGD43424.1;Parent=gene-C9F07_29145;Dbxref=NCBI_GP:TGD43424.1;Name=TGD43424.1;end_range=1844,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=C9F07_29145;partial=true;product=amidohydrolase;protein_id=TGD43424.1;transl_table=11 ##sequence-region PYKI01002590.1 1 1844 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002590.1 Genbank region 1 1844 . + . ID=PYKI01002590.1:1..1844;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002590.1 Genbank pseudogene 68 199 . + . ID=gene-C9F07_25700;Name=C9F07_25700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25700;pseudo=true PYKI01002590.1 Protein Homology CDS 68 199 . + 0 ID=cds-C9F07_25700;Parent=gene-C9F07_25700;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455892.1;locus_tag=C9F07_25700;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 PYKI01002590.1 Genbank gene 278 1844 . + . ID=gene-C9F07_25705;Name=C9F07_25705;end_range=1844,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25705;partial=true PYKI01002590.1 Protein Homology CDS 278 1844 . + 0 ID=cds-TGD49686.1;Parent=gene-C9F07_25705;Dbxref=NCBI_GP:TGD49686.1;Name=TGD49686.1;end_range=1844,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=C9F07_25705;partial=true;product=collagenase-like protease;protein_id=TGD49686.1;transl_table=11 ##sequence-region PYKI01002645.1 1 1844 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002645.1 Genbank region 1 1844 . + . ID=PYKI01002645.1:1..1844;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002645.1 Genbank gene 1 1844 . - . ID=gene-C9F07_26350;Name=C9F07_26350;end_range=1844,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26350;partial=true;start_range=.,1 PYKI01002645.1 Protein Homology CDS 1 1844 . - 2 ID=cds-TGD49386.1;Parent=gene-C9F07_26350;Dbxref=NCBI_GP:TGD49386.1;Name=TGD49386.1;end_range=1844,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=C9F07_26350;partial=true;product=miniconductance mechanosensitive channel MscM;protein_id=TGD49386.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01000982.1 1 1840 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000982.1 Genbank region 1 1840 . + . ID=PYKI01000982.1:1..1840;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000982.1 Genbank gene 1 261 . + . ID=gene-C9F07_08945;Name=C9F07_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08945;partial=true;start_range=.,1 PYKI01000982.1 Protein Homology CDS 1 261 . + 0 ID=cds-TGD99588.1;Parent=gene-C9F07_08945;Dbxref=NCBI_GP:TGD99588.1;Name=TGD99588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=C9F07_08945;partial=true;product=hypothetical protein;protein_id=TGD99588.1;start_range=.,1;transl_table=11 PYKI01000982.1 Genbank gene 255 860 . + . ID=gene-C9F07_08950;Name=C9F07_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08950 PYKI01000982.1 Protein Homology CDS 255 860 . + 0 ID=cds-TGD99589.1;Parent=gene-C9F07_08950;Dbxref=NCBI_GP:TGD99589.1;Name=TGD99589.1;Note=catalyzes the methylation of C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W-a;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456582.1;locus_tag=C9F07_08950;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=TGD99589.1;transl_table=11 PYKI01000982.1 Genbank gene 850 1428 . + . ID=gene-C9F07_08955;Name=C9F07_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08955 PYKI01000982.1 Protein Homology CDS 850 1428 . + 0 ID=cds-TGD99590.1;Parent=gene-C9F07_08955;Dbxref=NCBI_GP:TGD99590.1;Name=TGD99590.1;Note=catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W%3B decarboxylating;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=C9F07_08955;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=TGD99590.1;transl_table=11 PYKI01000982.1 Genbank pseudogene 1412 1738 . + . ID=gene-C9F07_08960;Name=cbiF;gbkey=Gene;gene=cbiF;gene_biotype=pseudogene;locus_tag=C9F07_08960;pseudo=true PYKI01000982.1 Protein Homology CDS 1412 1738 . + 0 ID=cds-C9F07_08960;Parent=gene-C9F07_08960;Note=catalyzes the formation of cobalt-precorrin-5 from cobalt-precorrin-4%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=cbiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456580.1;locus_tag=C9F07_08960;product=cobalt-precorrin-4 C(11)-methyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01002138.1 1 1835 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002138.1 Genbank region 1 1835 . + . ID=PYKI01002138.1:1..1835;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002138.1 Genbank gene 1 246 . + . ID=gene-C9F07_20715;Name=C9F07_20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20715;partial=true;start_range=.,1 PYKI01002138.1 Protein Homology CDS 1 246 . + 0 ID=cds-TGD57821.1;Parent=gene-C9F07_20715;Dbxref=NCBI_GP:TGD57821.1;Name=TGD57821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456715.1;locus_tag=C9F07_20715;partial=true;product=hypothetical protein;protein_id=TGD57821.1;start_range=.,1;transl_table=11 PYKI01002138.1 Genbank gene 418 948 . + . ID=gene-C9F07_20720;Name=C9F07_20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20720 PYKI01002138.1 Protein Homology CDS 418 948 . + 0 ID=cds-TGD57822.1;Parent=gene-C9F07_20720;Dbxref=NCBI_GP:TGD57822.1;Name=TGD57822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456716.1;locus_tag=C9F07_20720;product=DUF1307 domain-containing protein;protein_id=TGD57822.1;transl_table=11 PYKI01002138.1 Genbank gene 1005 1472 . - . ID=gene-C9F07_20725;Name=C9F07_20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20725 PYKI01002138.1 Protein Homology CDS 1005 1472 . - 0 ID=cds-TGD57824.1;Parent=gene-C9F07_20725;Dbxref=NCBI_GP:TGD57824.1;Name=TGD57824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456717.1;locus_tag=C9F07_20725;product=DUF1456 domain-containing protein;protein_id=TGD57824.1;transl_table=11 PYKI01002138.1 Genbank gene 1519 1835 . - . ID=gene-C9F07_20730;Name=C9F07_20730;end_range=1835,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20730;partial=true PYKI01002138.1 Protein Homology CDS 1519 1835 . - 2 ID=cds-TGD57823.1;Parent=gene-C9F07_20730;Dbxref=NCBI_GP:TGD57823.1;Name=TGD57823.1;Note=unknown function%3B when overproduced it confers drug-resistance;end_range=1835,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456718.1;locus_tag=C9F07_20730;partial=true;product=two-component system response regulator YehT;protein_id=TGD57823.1;transl_table=11 ##sequence-region PYKI01003404.1 1 1835 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003404.1 Genbank region 1 1835 . + . ID=PYKI01003404.1:1..1835;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003404.1 Genbank gene 1 1041 . + . ID=gene-C9F07_34215;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=C9F07_34215;partial=true;start_range=.,1 PYKI01003404.1 Protein Homology CDS 1 1041 . + 0 ID=cds-TGD33909.1;Parent=gene-C9F07_34215;Dbxref=NCBI_GP:TGD33909.1;Name=TGD33909.1;gbkey=CDS;gene=kdpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455265.1;locus_tag=C9F07_34215;partial=true;product=K(+)-transporting ATPase subunit B;protein_id=TGD33909.1;start_range=.,1;transl_table=11 PYKI01003404.1 Genbank gene 1050 1634 . + . ID=gene-C9F07_34220;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=C9F07_34220 PYKI01003404.1 Protein Homology CDS 1050 1634 . + 0 ID=cds-TGD33910.1;Parent=gene-C9F07_34220;Dbxref=NCBI_GP:TGD33910.1;Name=TGD33910.1;gbkey=CDS;gene=kdpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=C9F07_34220;product=potassium-transporting ATPase subunit KdpC;protein_id=TGD33910.1;transl_table=11 PYKI01003404.1 Genbank pseudogene 1631 1786 . + . ID=gene-C9F07_34225;Name=C9F07_34225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34225;pseudo=true PYKI01003404.1 Protein Homology CDS 1631 1786 . + 0 ID=cds-C9F07_34225;Parent=gene-C9F07_34225;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455263.1;locus_tag=C9F07_34225;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002621.1 1 1835 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002621.1 Genbank region 1 1835 . + . ID=PYKI01002621.1:1..1835;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002621.1 Genbank gene 1 73 . + . ID=gene-C9F07_26060;Name=C9F07_26060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26060;partial=true;start_range=.,1 PYKI01002621.1 Protein Homology CDS 1 73 . + 1 ID=cds-TGD49510.1;Parent=gene-C9F07_26060;Dbxref=NCBI_GP:TGD49510.1;Name=TGD49510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458973.1;locus_tag=C9F07_26060;partial=true;product=molecular chaperone OsmY;protein_id=TGD49510.1;start_range=.,1;transl_table=11 PYKI01002621.1 Genbank gene 184 363 . + . ID=gene-C9F07_26065;Name=C9F07_26065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26065 PYKI01002621.1 Protein Homology CDS 184 363 . + 0 ID=cds-TGD49507.1;Parent=gene-C9F07_26065;Dbxref=NCBI_GP:TGD49507.1;Name=TGD49507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458974.1;locus_tag=C9F07_26065;product=DUF1328 domain-containing protein;protein_id=TGD49507.1;transl_table=11 PYKI01002621.1 Genbank gene 487 1560 . + . ID=gene-C9F07_26070;Name=C9F07_26070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26070 PYKI01002621.1 Protein Homology CDS 487 1560 . + 0 ID=cds-TGD49508.1;Parent=gene-C9F07_26070;Dbxref=NCBI_GP:TGD49508.1;Name=TGD49508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=C9F07_26070;product=patatin family protein;protein_id=TGD49508.1;transl_table=11 PYKI01002621.1 Genbank gene 1557 1835 . + . ID=gene-C9F07_26075;Name=C9F07_26075;end_range=1835,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26075;partial=true PYKI01002621.1 Protein Homology CDS 1557 1835 . + 0 ID=cds-TGD49509.1;Parent=gene-C9F07_26075;Dbxref=NCBI_GP:TGD49509.1;Name=TGD49509.1;end_range=1835,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458976.1;locus_tag=C9F07_26075;partial=true;product=metal-dependent hydrolase;protein_id=TGD49509.1;transl_table=11 ##sequence-region PYKI01002199.1 1 1833 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002199.1 Genbank region 1 1833 . + . ID=PYKI01002199.1:1..1833;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002199.1 Genbank gene 1 94 . - . ID=gene-C9F07_21395;Name=C9F07_21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21395;partial=true;start_range=.,1 PYKI01002199.1 Protein Homology CDS 1 94 . - 0 ID=cds-TGD56546.1;Parent=gene-C9F07_21395;Dbxref=NCBI_GP:TGD56546.1;Name=TGD56546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456756.1;locus_tag=C9F07_21395;partial=true;product=phosphoserine phosphatase SerB;protein_id=TGD56546.1;start_range=.,1;transl_table=11 PYKI01002199.1 Genbank gene 311 1678 . + . ID=gene-C9F07_21400;Name=C9F07_21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21400 PYKI01002199.1 Protein Homology CDS 311 1678 . + 0 ID=cds-TGD56547.1;Parent=gene-C9F07_21400;Dbxref=NCBI_GP:TGD56547.1;Name=TGD56547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456755.1;locus_tag=C9F07_21400;product=L-serine ammonia-lyase;protein_id=TGD56547.1;transl_table=11 PYKI01002199.1 Genbank gene 1683 1833 . + . ID=gene-C9F07_21405;Name=C9F07_21405;end_range=1833,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21405;partial=true PYKI01002199.1 Protein Homology CDS 1683 1833 . + 0 ID=cds-TGD56548.1;Parent=gene-C9F07_21405;Dbxref=NCBI_GP:TGD56548.1;Name=TGD56548.1;end_range=1833,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=C9F07_21405;partial=true;product=transcriptional regulator;protein_id=TGD56548.1;transl_table=11 ##sequence-region PYKI01001767.1 1 1832 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001767.1 Genbank region 1 1832 . + . ID=PYKI01001767.1:1..1832;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001767.1 Genbank gene 201 1385 . + . ID=gene-C9F07_16980;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=C9F07_16980 PYKI01001767.1 Protein Homology CDS 201 1385 . + 0 ID=cds-TGD67843.1;Parent=gene-C9F07_16980;Dbxref=NCBI_GP:TGD67843.1;Name=TGD67843.1;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457924.1;locus_tag=C9F07_16980;product=elongation factor Tu;protein_id=TGD67843.1;transl_table=11 PYKI01001767.1 Genbank gene 1615 1812 . + . ID=gene-C9F07_16985;Name=C9F07_16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16985 PYKI01001767.1 Protein Homology CDS 1615 1812 . + 0 ID=cds-TGD67844.1;Parent=gene-C9F07_16985;Dbxref=NCBI_GP:TGD67844.1;Name=TGD67844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001275692.1;locus_tag=C9F07_16985;product=preprotein translocase subunit SecE;protein_id=TGD67844.1;transl_table=11 ##sequence-region PYKI01002278.1 1 1831 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002278.1 Genbank region 1 1831 . + . ID=PYKI01002278.1:1..1831;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002278.1 Genbank gene 1 716 . - . ID=gene-C9F07_22325;Name=C9F07_22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22325;partial=true;start_range=.,1 PYKI01002278.1 Protein Homology CDS 1 716 . - 0 ID=cds-TGD55022.1;Parent=gene-C9F07_22325;Dbxref=NCBI_GP:TGD55022.1;Name=TGD55022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458872.1;locus_tag=C9F07_22325;partial=true;product=PTS trehalose transporter subunit IIBC;protein_id=TGD55022.1;start_range=.,1;transl_table=11 PYKI01002278.1 Genbank gene 854 1801 . - . ID=gene-C9F07_22330;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=C9F07_22330 PYKI01002278.1 Protein Homology CDS 854 1801 . - 0 ID=cds-TGD55023.1;Parent=gene-C9F07_22330;Dbxref=NCBI_GP:TGD55023.1;Name=TGD55023.1;Note=regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon;gbkey=CDS;gene=treR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=C9F07_22330;product=trehalose operon repressor;protein_id=TGD55023.1;transl_table=11 ##sequence-region PYKI01000986.1 1 1828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000986.1 Genbank region 1 1828 . + . ID=PYKI01000986.1:1..1828;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000986.1 Genbank gene 1 548 . - . ID=gene-C9F07_09000;Name=C9F07_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09000;partial=true;start_range=.,1 PYKI01000986.1 Protein Homology CDS 1 548 . - 0 ID=cds-TGD99253.1;Parent=gene-C9F07_09000;Dbxref=NCBI_GP:TGD99253.1;Name=TGD99253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458932.1;locus_tag=C9F07_09000;partial=true;product=tryptophan--tRNA ligase;protein_id=TGD99253.1;start_range=.,1;transl_table=11 PYKI01000986.1 Genbank gene 1266 1796 . + . ID=gene-C9F07_09005;Name=C9F07_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09005 PYKI01000986.1 Protein Homology CDS 1266 1796 . + 0 ID=cds-TGD99254.1;Parent=gene-C9F07_09005;Dbxref=NCBI_GP:TGD99254.1;Name=TGD99254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=C9F07_09005;product=cytoplasmic protein;protein_id=TGD99254.1;transl_table=11 ##sequence-region PYKI01000809.1 1 1828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000809.1 Genbank region 1 1828 . + . ID=PYKI01000809.1:1..1828;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000809.1 Genbank gene 1 691 . + . ID=gene-C9F07_07285;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=C9F07_07285;partial=true;start_range=.,1 PYKI01000809.1 Protein Homology CDS 1 691 . + 1 ID=cds-TGE08877.1;Parent=gene-C9F07_07285;Dbxref=NCBI_GP:TGE08877.1;Name=TGE08877.1;Note=FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=C9F07_07285;partial=true;product=flagellar biosynthesis protein FlgF;protein_id=TGE08877.1;start_range=.,1;transl_table=11 PYKI01000809.1 Genbank gene 705 1487 . + . ID=gene-C9F07_07290;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=C9F07_07290 PYKI01000809.1 Protein Homology CDS 705 1487 . + 0 ID=cds-TGE08878.1;Parent=gene-C9F07_07290;Dbxref=NCBI_GP:TGE08878.1;Name=TGE08878.1;gbkey=CDS;gene=flgG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=C9F07_07290;product=flagellar basal body rod protein FlgG;protein_id=TGE08878.1;transl_table=11 PYKI01000809.1 Genbank gene 1541 1828 . + . ID=gene-C9F07_07295;Name=C9F07_07295;end_range=1828,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07295;partial=true PYKI01000809.1 Protein Homology CDS 1541 1828 . + 0 ID=cds-TGE08879.1;Parent=gene-C9F07_07295;Dbxref=NCBI_GP:TGE08879.1;Name=TGE08879.1;end_range=1828,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455673.1;locus_tag=C9F07_07295;partial=true;product=hypothetical protein;protein_id=TGE08879.1;transl_table=11 ##sequence-region PYKI01002330.1 1 1825 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002330.1 Genbank region 1 1825 . + . ID=PYKI01002330.1:1..1825;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002330.1 Genbank gene 131 508 . - . ID=gene-C9F07_22850;Name=C9F07_22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22850 PYKI01002330.1 Protein Homology CDS 131 508 . - 0 ID=cds-TGD53840.1;Parent=gene-C9F07_22850;Dbxref=NCBI_GP:TGD53840.1;Name=TGD53840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=C9F07_22850;product=Co2+/Mg2+ efflux protein ApaG;protein_id=TGD53840.1;transl_table=11 PYKI01002330.1 Genbank gene 511 1332 . - . ID=gene-C9F07_22855;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=C9F07_22855 PYKI01002330.1 Protein Homology CDS 511 1332 . - 0 ID=cds-TGD53841.1;Parent=gene-C9F07_22855;Dbxref=NCBI_GP:TGD53841.1;Name=TGD53841.1;Note=in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions;gbkey=CDS;gene=ksgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454702.1;locus_tag=C9F07_22855;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase;protein_id=TGD53841.1;transl_table=11 PYKI01002330.1 Genbank gene 1329 1825 . - . ID=gene-C9F07_22860;Name=C9F07_22860;end_range=1825,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22860;partial=true PYKI01002330.1 Protein Homology CDS 1329 1825 . - 2 ID=cds-TGD53842.1;Parent=gene-C9F07_22860;Dbxref=NCBI_GP:TGD53842.1;Name=TGD53842.1;end_range=1825,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454703.1;locus_tag=C9F07_22860;partial=true;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=TGD53842.1;transl_table=11 ##sequence-region PYKI01002242.1 1 1823 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002242.1 Genbank region 1 1823 . + . ID=PYKI01002242.1:1..1823;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002242.1 Genbank gene 268 1176 . - . ID=gene-C9F07_21910;Name=C9F07_21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21910 PYKI01002242.1 Protein Homology CDS 268 1176 . - 0 ID=cds-TGD55963.1;Parent=gene-C9F07_21910;Dbxref=NCBI_GP:TGD55963.1;Name=TGD55963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456739.1;locus_tag=C9F07_21910;product=LysR family transcriptional regulator;protein_id=TGD55963.1;transl_table=11 PYKI01002242.1 Genbank gene 1302 1823 . + . ID=gene-C9F07_21915;Name=C9F07_21915;end_range=1823,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21915;partial=true PYKI01002242.1 Protein Homology CDS 1302 1823 . + 0 ID=cds-TGD55964.1;Parent=gene-C9F07_21915;Dbxref=NCBI_GP:TGD55964.1;Name=TGD55964.1;end_range=1823,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456738.1;locus_tag=C9F07_21915;partial=true;product=aromatic acid/H+ symport family MFS transporter;protein_id=TGD55964.1;transl_table=11 ##sequence-region PYKI01003238.1 1 1823 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003238.1 Genbank region 1 1823 . + . ID=PYKI01003238.1:1..1823;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003238.1 Genbank gene 1 422 . - . ID=gene-C9F07_32610;Name=C9F07_32610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32610;partial=true;start_range=.,1 PYKI01003238.1 Protein Homology CDS 1 422 . - 0 ID=cds-TGD36465.1;Parent=gene-C9F07_32610;Dbxref=NCBI_GP:TGD36465.1;Name=TGD36465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458226.1;locus_tag=C9F07_32610;partial=true;product=protein-export chaperone SecB;protein_id=TGD36465.1;start_range=.,1;transl_table=11 PYKI01003238.1 Genbank gene 466 717 . - . ID=gene-C9F07_32615;Name=C9F07_32615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32615 PYKI01003238.1 Protein Homology CDS 466 717 . - 0 ID=cds-TGD36466.1;Parent=gene-C9F07_32615;Dbxref=NCBI_GP:TGD36466.1;Name=TGD36466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458225.1;locus_tag=C9F07_32615;product=glutaredoxin 3;protein_id=TGD36466.1;transl_table=11 PYKI01003238.1 Genbank gene 803 1234 . - . ID=gene-C9F07_32620;Name=C9F07_32620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32620 PYKI01003238.1 Protein Homology CDS 803 1234 . - 0 ID=cds-TGD36467.1;Parent=gene-C9F07_32620;Dbxref=NCBI_GP:TGD36467.1;Name=TGD36467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458224.1;locus_tag=C9F07_32620;product=rhodanese-like domain-containing protein;protein_id=TGD36467.1;transl_table=11 PYKI01003238.1 Genbank gene 1482 1823 . + . ID=gene-C9F07_32625;Name=C9F07_32625;end_range=1823,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32625;partial=true PYKI01003238.1 Protein Homology CDS 1482 1823 . + 0 ID=cds-TGD36468.1;Parent=gene-C9F07_32625;Dbxref=NCBI_GP:TGD36468.1;Name=TGD36468.1;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;end_range=1823,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=C9F07_32625;partial=true;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=TGD36468.1;transl_table=11 ##sequence-region PYKI01002719.1 1 1822 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002719.1 Genbank region 1 1822 . + . ID=PYKI01002719.1:1..1822;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002719.1 Genbank gene 1 383 . - . ID=gene-C9F07_27105;Name=C9F07_27105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27105;partial=true;start_range=.,1 PYKI01002719.1 Protein Homology CDS 1 383 . - 0 ID=cds-TGD47791.1;Parent=gene-C9F07_27105;Dbxref=NCBI_GP:TGD47791.1;Name=TGD47791.1;Note=with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate%3B subunit Z may act as a chaperone for the Y subunit;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=C9F07_27105;partial=true;product=tagatose-bisphosphate aldolase;protein_id=TGD47791.1;start_range=.,1;transl_table=11 PYKI01002719.1 Genbank pseudogene 503 1356 . - . ID=gene-C9F07_27110;Name=C9F07_27110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27110;pseudo=true PYKI01002719.1 Protein Homology CDS 503 1356 . - 0 ID=cds-C9F07_27110;Parent=gene-C9F07_27110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457638.1;locus_tag=C9F07_27110;product=tagatose bisphosphate family class II aldolase;pseudo=true;transl_table=11 PYKI01002719.1 Genbank gene 1614 1822 . - . ID=gene-C9F07_27115;Name=C9F07_27115;end_range=1822,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27115;partial=true PYKI01002719.1 Protein Homology CDS 1614 1822 . - 2 ID=cds-TGD47790.1;Parent=gene-C9F07_27115;Dbxref=NCBI_GP:TGD47790.1;Name=TGD47790.1;end_range=1822,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457636.1;locus_tag=C9F07_27115;partial=true;product=hypothetical protein;protein_id=TGD47790.1;transl_table=11 ##sequence-region PYKI01002522.1 1 1822 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002522.1 Genbank region 1 1822 . + . ID=PYKI01002522.1:1..1822;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002522.1 Genbank gene 1 473 . + . ID=gene-C9F07_25015;Name=C9F07_25015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25015;partial=true;start_range=.,1 PYKI01002522.1 Protein Homology CDS 1 473 . + 2 ID=cds-TGD50097.1;Parent=gene-C9F07_25015;Dbxref=NCBI_GP:TGD50097.1;Name=TGD50097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454616.1;locus_tag=C9F07_25015;partial=true;product=sodium:alanine symporter family protein;protein_id=TGD50097.1;start_range=.,1;transl_table=11 PYKI01002522.1 Genbank gene 552 1325 . + . ID=gene-C9F07_25020;Name=C9F07_25020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25020 PYKI01002522.1 Protein Homology CDS 552 1325 . + 0 ID=cds-TGD50096.1;Parent=gene-C9F07_25020;Dbxref=NCBI_GP:TGD50096.1;Name=TGD50096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=C9F07_25020;product=peroxide stress protein YaaA;protein_id=TGD50096.1;transl_table=11 PYKI01002522.1 Genbank gene 1419 1822 . - . ID=gene-C9F07_25025;Name=C9F07_25025;end_range=1822,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25025;partial=true PYKI01002522.1 Protein Homology CDS 1419 1822 . - 2 ID=cds-TGD50098.1;Parent=gene-C9F07_25025;Dbxref=NCBI_GP:TGD50098.1;Name=TGD50098.1;end_range=1822,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454614.1;locus_tag=C9F07_25025;partial=true;product=threonine synthase;protein_id=TGD50098.1;transl_table=11 ##sequence-region PYKI01000683.1 1 4601 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000683.1 Genbank region 1 4601 . + . ID=PYKI01000683.1:1..4601;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000683.1 Genbank gene 1 173 . + . ID=gene-C9F07_05930;Name=C9F07_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05930;partial=true;start_range=.,1 PYKI01000683.1 Protein Homology CDS 1 173 . + 2 ID=cds-TGE11511.1;Parent=gene-C9F07_05930;Dbxref=NCBI_GP:TGE11511.1;Name=TGE11511.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456336.1;locus_tag=C9F07_05930;partial=true;product=PTS mannose transporter subunit IIAB;protein_id=TGE11511.1;start_range=.,1;transl_table=11 PYKI01000683.1 Genbank gene 226 1026 . + . ID=gene-C9F07_05935;Name=C9F07_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05935 PYKI01000683.1 Protein Homology CDS 226 1026 . + 0 ID=cds-TGE11512.1;Parent=gene-C9F07_05935;Dbxref=NCBI_GP:TGE11512.1;Name=TGE11512.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=C9F07_05935;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=TGE11512.1;transl_table=11 PYKI01000683.1 Genbank gene 1039 1890 . + . ID=gene-C9F07_05940;Name=C9F07_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05940 PYKI01000683.1 Protein Homology CDS 1039 1890 . + 0 ID=cds-TGE11513.1;Parent=gene-C9F07_05940;Dbxref=NCBI_GP:TGE11513.1;Name=TGE11513.1;Note=hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456338.3;locus_tag=C9F07_05940;product=PTS mannose transporter subunit IID;protein_id=TGE11513.1;transl_table=11 PYKI01000683.1 Genbank gene 1949 2407 . + . ID=gene-C9F07_05945;Name=C9F07_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05945 PYKI01000683.1 Protein Homology CDS 1949 2407 . + 0 ID=cds-TGE11514.1;Parent=gene-C9F07_05945;Dbxref=NCBI_GP:TGE11514.1;Name=TGE11514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460789.1;locus_tag=C9F07_05945;product=DUF986 domain-containing protein;protein_id=TGE11514.1;transl_table=11 PYKI01000683.1 Genbank pseudogene 2594 2817 . + . ID=gene-C9F07_05950;Name=C9F07_05950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05950;pseudo=true PYKI01000683.1 Protein Homology CDS 2594 2817 . + 0 ID=cds-C9F07_05950;Parent=gene-C9F07_05950;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002412838.1;locus_tag=C9F07_05950;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000683.1 Genbank gene 2763 3383 . + . ID=gene-C9F07_05955;Name=C9F07_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05955 PYKI01000683.1 Protein Homology CDS 2763 3383 . + 0 ID=cds-TGE11516.1;Parent=gene-C9F07_05955;Dbxref=NCBI_GP:TGE11516.1;Name=TGE11516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460790.1;locus_tag=C9F07_05955;product=manganese efflux pump MntP;protein_id=TGE11516.1;transl_table=11 PYKI01000683.1 Genbank gene 3380 4189 . - . ID=gene-C9F07_05960;Name=C9F07_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05960 PYKI01000683.1 Protein Homology CDS 3380 4189 . - 0 ID=cds-TGE11515.1;Parent=gene-C9F07_05960;Dbxref=NCBI_GP:TGE11515.1;Name=TGE11515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=C9F07_05960;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=TGE11515.1;transl_table=11 PYKI01000683.1 Genbank pseudogene 4255 4601 . - . ID=gene-C9F07_05965;Name=C9F07_05965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05965;pseudo=true PYKI01000683.1 Protein Homology CDS 4255 4601 . - 2 ID=cds-C9F07_05965;Parent=gene-C9F07_05965;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456342.1;locus_tag=C9F07_05965;product=peptidoglycan synthase;pseudo=true;transl_table=11 ##sequence-region PYKI01000987.1 1 1818 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000987.1 Genbank region 1 1818 . + . ID=PYKI01000987.1:1..1818;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000987.1 Genbank gene 1 278 . + . ID=gene-C9F07_09010;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=C9F07_09010;partial=true;start_range=.,1 PYKI01000987.1 Protein Homology CDS 1 278 . + 2 ID=cds-TGD99215.1;Parent=gene-C9F07_09010;Dbxref=NCBI_GP:TGD99215.1;Name=TGD99215.1;Note=catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid;gbkey=CDS;gene=dkgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=C9F07_09010;partial=true;product=2%2C5-didehydrogluconate reductase B;protein_id=TGD99215.1;start_range=.,1;transl_table=11 PYKI01000987.1 Genbank gene 300 1214 . - . ID=gene-C9F07_09015;Name=C9F07_09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09015 PYKI01000987.1 Protein Homology CDS 300 1214 . - 0 ID=cds-TGD99216.1;Parent=gene-C9F07_09015;Dbxref=NCBI_GP:TGD99216.1;Name=TGD99216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454859.1;locus_tag=C9F07_09015;product=LysR family transcriptional regulator;protein_id=TGD99216.1;transl_table=11 PYKI01000987.1 Genbank pseudogene 1319 1753 . + . ID=gene-C9F07_09020;Name=C9F07_09020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09020;pseudo=true PYKI01000987.1 Protein Homology CDS 1319 1753 . + 0 ID=cds-C9F07_09020;Parent=gene-C9F07_09020;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=C9F07_09020;product=MFS sugar transporter;pseudo=true;transl_table=11 ##sequence-region PYKI01003189.1 1 1815 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003189.1 Genbank region 1 1815 . + . ID=PYKI01003189.1:1..1815;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003189.1 Genbank pseudogene 1 196 . - . ID=gene-C9F07_32010;Name=C9F07_32010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32010;pseudo=true PYKI01003189.1 Protein Homology CDS 1 196 . - 0 ID=cds-C9F07_32010;Parent=gene-C9F07_32010;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001148015.1;locus_tag=C9F07_32010;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01003189.1 Genbank gene 443 1815 . - . ID=gene-C9F07_32015;Name=C9F07_32015;end_range=1815,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32015;partial=true PYKI01003189.1 Protein Homology CDS 443 1815 . - 2 ID=cds-TGD37525.1;Parent=gene-C9F07_32015;Dbxref=NCBI_GP:TGD37525.1;Name=TGD37525.1;Note=unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ (but not ArcA)%2C induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic);end_range=1815,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=C9F07_32015;partial=true;product=oxidoreductase FeS-binding subunit;protein_id=TGD37525.1;transl_table=11 ##sequence-region PYKI01000517.1 1 1814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000517.1 Genbank region 1 1814 . + . ID=PYKI01000517.1:1..1814;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000517.1 Genbank gene 65 1270 . + . ID=gene-C9F07_04290;Name=C9F07_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04290 PYKI01000517.1 Protein Homology CDS 65 1270 . + 0 ID=cds-TGE16466.1;Parent=gene-C9F07_04290;Dbxref=NCBI_GP:TGE16466.1;Name=TGE16466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=C9F07_04290;product=lysine-N-methylase;protein_id=TGE16466.1;transl_table=11 PYKI01000517.1 Genbank gene 1467 1814 . + . ID=gene-C9F07_04295;Name=fliA;end_range=1814,.;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=C9F07_04295;partial=true PYKI01000517.1 Protein Homology CDS 1467 1814 . + 0 ID=cds-TGE16467.1;Parent=gene-C9F07_04295;Dbxref=NCBI_GP:TGE16467.1;Name=TGE16467.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;end_range=1814,.;gbkey=CDS;gene=fliA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456519.1;locus_tag=C9F07_04295;partial=true;product=RNA polymerase sigma factor FliA;protein_id=TGE16467.1;transl_table=11 ##sequence-region PYKI01003498.1 1 1813 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003498.1 Genbank region 1 1813 . + . ID=PYKI01003498.1:1..1813;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003498.1 Genbank gene 1 688 . - . ID=gene-C9F07_35205;Name=C9F07_35205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35205;partial=true;start_range=.,1 PYKI01003498.1 Protein Homology CDS 1 688 . - 0 ID=cds-TGD32157.1;Parent=gene-C9F07_35205;Dbxref=NCBI_GP:TGD32157.1;Name=TGD32157.1;Note=involved with the transport of ferrichrome across the outer membrane%3B binds the ferrichrome-iron ligand and interacts with the TonB protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=C9F07_35205;partial=true;product=TonB-dependent siderophore receptor;protein_id=TGD32157.1;start_range=.,1;transl_table=11 PYKI01003498.1 Genbank gene 981 1813 . - . ID=gene-C9F07_35210;Name=C9F07_35210;end_range=1813,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35210;partial=true PYKI01003498.1 Protein Homology CDS 981 1813 . - 2 ID=cds-TGD32158.1;Parent=gene-C9F07_35210;Dbxref=NCBI_GP:TGD32158.1;Name=TGD32158.1;end_range=1813,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=C9F07_35210;partial=true;product=hypothetical protein;protein_id=TGD32158.1;transl_table=11 ##sequence-region PYKI01000342.1 1 1812 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000342.1 Genbank region 1 1812 . + . ID=PYKI01000342.1:1..1812;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000342.1 Genbank gene 1 993 . + . ID=gene-C9F07_02530;Name=C9F07_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02530;partial=true;start_range=.,1 PYKI01000342.1 Protein Homology CDS 1 993 . + 0 ID=cds-TGE26832.1;Parent=gene-C9F07_02530;Dbxref=NCBI_GP:TGE26832.1;Name=TGE26832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=C9F07_02530;partial=true;product=MFS transporter;protein_id=TGE26832.1;start_range=.,1;transl_table=11 PYKI01000342.1 Genbank pseudogene 1004 1812 . + . ID=gene-C9F07_02535;Name=C9F07_02535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02535;pseudo=true PYKI01000342.1 Protein Homology CDS 1004 1812 . + 0 ID=cds-C9F07_02535;Parent=gene-C9F07_02535;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=C9F07_02535;product=alcohol dehydrogenase;pseudo=true;transl_table=11 ##sequence-region PYKI01000518.1 1 1811 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000518.1 Genbank region 1 1811 . + . ID=PYKI01000518.1:1..1811;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000518.1 Genbank gene 1 1211 . - . ID=gene-C9F07_04300;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=C9F07_04300;partial=true;start_range=.,1 PYKI01000518.1 Protein Homology CDS 1 1211 . - 0 ID=cds-TGE16464.1;Parent=gene-C9F07_04300;Dbxref=NCBI_GP:TGE16464.1;Name=TGE16464.1;Note=hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=C9F07_04300;partial=true;product=N-acetylmuramoyl-L-alanine amidase;protein_id=TGE16464.1;start_range=.,1;transl_table=11 PYKI01000518.1 Genbank gene 1444 1811 . + . ID=gene-C9F07_04305;Name=C9F07_04305;end_range=1811,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04305;partial=true PYKI01000518.1 Protein Homology CDS 1444 1811 . + 0 ID=cds-TGE16465.1;Parent=gene-C9F07_04305;Dbxref=NCBI_GP:TGE16465.1;Name=TGE16465.1;Note=catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis;end_range=1811,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=C9F07_04305;partial=true;product=amino-acid N-acetyltransferase;protein_id=TGE16465.1;transl_table=11 ##sequence-region PYKI01002618.1 1 1810 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002618.1 Genbank region 1 1810 . + . ID=PYKI01002618.1:1..1810;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002618.1 Genbank gene 1 966 . - . ID=gene-C9F07_26030;Name=C9F07_26030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26030;partial=true;start_range=.,1 PYKI01002618.1 Protein Homology CDS 1 966 . - 0 ID=cds-TGD49524.1;Parent=gene-C9F07_26030;Dbxref=NCBI_GP:TGD49524.1;Name=TGD49524.1;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=C9F07_26030;partial=true;product=ATP-dependent RNA helicase HrpA;protein_id=TGD49524.1;start_range=.,1;transl_table=11 PYKI01002618.1 Genbank gene 1167 1763 . + . ID=gene-C9F07_26035;Name=C9F07_26035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26035 PYKI01002618.1 Protein Homology CDS 1167 1763 . + 0 ID=cds-TGD49523.1;Parent=gene-C9F07_26035;Dbxref=NCBI_GP:TGD49523.1;Name=TGD49523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455862.1;locus_tag=C9F07_26035;product=FMN-dependent NADH-azoreductase;protein_id=TGD49523.1;transl_table=11 ##sequence-region PYKI01002592.1 1 1810 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002592.1 Genbank region 1 1810 . + . ID=PYKI01002592.1:1..1810;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002592.1 Genbank gene 1 638 . + . ID=gene-C9F07_25725;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=C9F07_25725;partial=true;start_range=.,1 PYKI01002592.1 Protein Homology CDS 1 638 . + 2 ID=cds-TGD49674.1;Parent=gene-C9F07_25725;Dbxref=NCBI_GP:TGD49674.1;Name=TGD49674.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=C9F07_25725;partial=true;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=TGD49674.1;start_range=.,1;transl_table=11 PYKI01002592.1 Genbank gene 664 924 . + . ID=gene-C9F07_25730;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=C9F07_25730 PYKI01002592.1 Protein Homology CDS 664 924 . + 0 ID=cds-TGD49675.1;Parent=gene-C9F07_25730;Dbxref=NCBI_GP:TGD49675.1;Name=TGD49675.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457283.1;locus_tag=C9F07_25730;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=TGD49675.1;transl_table=11 PYKI01002592.1 Genbank gene 928 1719 . + . ID=gene-C9F07_25735;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=C9F07_25735 PYKI01002592.1 Protein Homology CDS 928 1719 . + 0 ID=cds-TGD49676.1;Parent=gene-C9F07_25735;Dbxref=NCBI_GP:TGD49676.1;Name=TGD49676.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=C9F07_25735;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=TGD49676.1;transl_table=11 ##sequence-region PYKI01000487.1 1 1808 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000487.1 Genbank region 1 1808 . + . ID=PYKI01000487.1:1..1808;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000487.1 Genbank gene 1 901 . + . ID=gene-C9F07_03920;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=C9F07_03920;partial=true;start_range=.,1 PYKI01000487.1 Protein Homology CDS 1 901 . + 1 ID=cds-TGE18274.1;Parent=gene-C9F07_03920;Dbxref=NCBI_GP:TGE18274.1;Name=TGE18274.1;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=C9F07_03920;partial=true;product=dipeptide ABC transporter ATP-binding protein;protein_id=TGE18274.1;start_range=.,1;transl_table=11 PYKI01000487.1 Genbank gene 1002 1808 . - . ID=gene-C9F07_03925;Name=C9F07_03925;end_range=1808,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03925;partial=true PYKI01000487.1 Protein Homology CDS 1002 1808 . - 0 ID=cds-TGE18275.1;Parent=gene-C9F07_03925;Dbxref=NCBI_GP:TGE18275.1;Name=TGE18275.1;end_range=1808,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=C9F07_03925;partial=true;product=transporter;protein_id=TGE18275.1;transl_table=11 ##sequence-region PYKI01001483.1 1 4592 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001483.1 Genbank region 1 4592 . + . ID=PYKI01001483.1:1..4592;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001483.1 Genbank gene 1 729 . - . ID=gene-C9F07_14080;Name=C9F07_14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14080;partial=true;start_range=.,1 PYKI01001483.1 Protein Homology CDS 1 729 . - 0 ID=cds-TGD79977.1;Parent=gene-C9F07_14080;Dbxref=NCBI_GP:TGD79977.1;Name=TGD79977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455973.1;locus_tag=C9F07_14080;partial=true;product=MFS transporter;protein_id=TGD79977.1;start_range=.,1;transl_table=11 PYKI01001483.1 Genbank gene 783 1802 . - . ID=gene-C9F07_14085;Name=C9F07_14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14085 PYKI01001483.1 Protein Homology CDS 783 1802 . - 0 ID=cds-TGD79972.1;Parent=gene-C9F07_14085;Dbxref=NCBI_GP:TGD79972.1;Name=TGD79972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=C9F07_14085;product=Zn-dependent oxidoreductase;protein_id=TGD79972.1;transl_table=11 PYKI01001483.1 Genbank gene 1813 3027 . - . ID=gene-C9F07_14090;Name=C9F07_14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14090 PYKI01001483.1 Protein Homology CDS 1813 3027 . - 0 ID=cds-TGD79973.1;Parent=gene-C9F07_14090;Dbxref=NCBI_GP:TGD79973.1;Name=TGD79973.1;Note=starvation-sensing protein%3B maybe involved in homoserine lactone degradation;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=C9F07_14090;product=bifunctional D-altronate/D-mannonate dehydratase;protein_id=TGD79973.1;transl_table=11 PYKI01001483.1 Genbank gene 3149 3475 . - . ID=gene-C9F07_14095;Name=C9F07_14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14095 PYKI01001483.1 Protein Homology CDS 3149 3475 . - 0 ID=cds-TGD79974.1;Parent=gene-C9F07_14095;Dbxref=NCBI_GP:TGD79974.1;Name=TGD79974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455976.1;locus_tag=C9F07_14095;product=YnfA family protein;protein_id=TGD79974.1;transl_table=11 PYKI01001483.1 Genbank gene 3628 3969 . + . ID=gene-C9F07_14100;Name=C9F07_14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14100 PYKI01001483.1 Protein Homology CDS 3628 3969 . + 0 ID=cds-TGD79975.1;Parent=gene-C9F07_14100;Dbxref=NCBI_GP:TGD79975.1;Name=TGD79975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455977.1;locus_tag=C9F07_14100;product=DUF1283 domain-containing protein;protein_id=TGD79975.1;transl_table=11 PYKI01001483.1 Genbank gene 4005 4565 . + . ID=gene-C9F07_14105;Name=C9F07_14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14105 PYKI01001483.1 Protein Homology CDS 4005 4565 . + 0 ID=cds-TGD79976.1;Parent=gene-C9F07_14105;Dbxref=NCBI_GP:TGD79976.1;Name=TGD79976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=C9F07_14105;product=spermidine N1-acetyltransferase;protein_id=TGD79976.1;transl_table=11 ##sequence-region PYKI01003156.1 1 1807 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003156.1 Genbank region 1 1807 . + . ID=PYKI01003156.1:1..1807;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003156.1 Genbank gene 172 1807 . - . ID=gene-C9F07_31655;Name=C9F07_31655;end_range=1807,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31655;partial=true PYKI01003156.1 Protein Homology CDS 172 1807 . - 1 ID=cds-TGD38340.1;Parent=gene-C9F07_31655;Dbxref=NCBI_GP:TGD38340.1;Name=TGD38340.1;Note=catalyzes the formation of malate from fumerate;end_range=1807,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=C9F07_31655;partial=true;product=fumarate hydratase;protein_id=TGD38340.1;transl_table=11 ##sequence-region PYKI01000571.1 1 1807 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000571.1 Genbank region 1 1807 . + . ID=PYKI01000571.1:1..1807;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000571.1 Genbank gene 1 890 . - . ID=gene-C9F07_04830;Name=C9F07_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04830;partial=true;start_range=.,1 PYKI01000571.1 Protein Homology CDS 1 890 . - 0 ID=cds-TGE14591.1;Parent=gene-C9F07_04830;Dbxref=NCBI_GP:TGE14591.1;Name=TGE14591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456620.1;locus_tag=C9F07_04830;partial=true;product=histidinol dehydrogenase;protein_id=TGE14591.1;start_range=.,1;transl_table=11 PYKI01000571.1 Genbank gene 981 1807 . - . ID=gene-C9F07_04835;Name=C9F07_04835;end_range=1807,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04835;partial=true PYKI01000571.1 Protein Homology CDS 981 1807 . - 2 ID=cds-TGE14592.1;Parent=gene-C9F07_04835;Dbxref=NCBI_GP:TGE14592.1;Name=TGE14592.1;end_range=1807,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001413481.1;locus_tag=C9F07_04835;partial=true;product=ATP phosphoribosyltransferase;protein_id=TGE14592.1;transl_table=11 ##sequence-region PYKI01002442.1 1 1804 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002442.1 Genbank region 1 1804 . + . ID=PYKI01002442.1:1..1804;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002442.1 Genbank gene 1 140 . - . ID=gene-C9F07_24130;Name=C9F07_24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24130;partial=true;start_range=.,1 PYKI01002442.1 Protein Homology CDS 1 140 . - 0 ID=cds-TGD51063.1;Parent=gene-C9F07_24130;Dbxref=NCBI_GP:TGD51063.1;Name=TGD51063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457396.1;locus_tag=C9F07_24130;partial=true;product=prolipoprotein diacylglyceryl transferase;protein_id=TGD51063.1;start_range=.,1;transl_table=11 PYKI01002442.1 Genbank gene 356 1804 . - . ID=gene-C9F07_24135;Name=C9F07_24135;end_range=1804,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24135;partial=true PYKI01002442.1 Protein Homology CDS 356 1804 . - 0 ID=cds-TGD51064.1;Parent=gene-C9F07_24135;Dbxref=NCBI_GP:TGD51064.1;Name=TGD51064.1;Note=member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr;end_range=1804,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=C9F07_24135;partial=true;product=phosphoenolpyruvate-protein phosphotransferase PtsP;protein_id=TGD51064.1;transl_table=11 ##sequence-region PYKI01002512.1 1 1802 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002512.1 Genbank region 1 1802 . + . ID=PYKI01002512.1:1..1802;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002512.1 Genbank gene 1 125 . - . ID=gene-C9F07_24890;Name=C9F07_24890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24890;partial=true;start_range=.,1 PYKI01002512.1 Protein Homology CDS 1 125 . - 0 ID=cds-TGD50181.1;Parent=gene-C9F07_24890;Dbxref=NCBI_GP:TGD50181.1;Name=TGD50181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457601.1;locus_tag=C9F07_24890;partial=true;product=DNA primase;protein_id=TGD50181.1;start_range=.,1;transl_table=11 PYKI01002512.1 Genbank gene 361 576 . - . ID=gene-C9F07_24895;Name=C9F07_24895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24895 PYKI01002512.1 Protein Homology CDS 361 576 . - 0 ID=cds-TGD50179.1;Parent=gene-C9F07_24895;Dbxref=NCBI_GP:TGD50179.1;Name=TGD50179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=C9F07_24895;product=30S ribosomal protein S21;protein_id=TGD50179.1;transl_table=11 PYKI01002512.1 Genbank gene 804 1802 . + . ID=gene-C9F07_24900;Name=tsaD;end_range=1802,.;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=C9F07_24900;partial=true PYKI01002512.1 Protein Homology CDS 804 1802 . + 0 ID=cds-TGD50180.1;Parent=gene-C9F07_24900;Dbxref=NCBI_GP:TGD50180.1;Name=TGD50180.1;end_range=1802,.;gbkey=CDS;gene=tsaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=C9F07_24900;partial=true;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=TGD50180.1;transl_table=11 ##sequence-region PYKI01003312.1 1 1801 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003312.1 Genbank region 1 1801 . + . ID=PYKI01003312.1:1..1801;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003312.1 Genbank gene 1 737 . + . ID=gene-C9F07_33310;Name=C9F07_33310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33310;partial=true;start_range=.,1 PYKI01003312.1 Protein Homology CDS 1 737 . + 2 ID=cds-TGD36002.1;Parent=gene-C9F07_33310;Dbxref=NCBI_GP:TGD36002.1;Name=TGD36002.1;Note=regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460874.1;locus_tag=C9F07_33310;partial=true;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=TGD36002.1;start_range=.,1;transl_table=11 PYKI01003312.1 Genbank gene 755 1144 . + . ID=gene-C9F07_33315;Name=C9F07_33315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33315 PYKI01003312.1 Protein Homology CDS 755 1144 . + 0 ID=cds-TGD36003.1;Parent=gene-C9F07_33315;Dbxref=NCBI_GP:TGD36003.1;Name=TGD36003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127682.1;locus_tag=C9F07_33315;product=two-component system response regulator;protein_id=TGD36003.1;transl_table=11 PYKI01003312.1 Genbank gene 1155 1799 . + . ID=gene-C9F07_33320;Name=C9F07_33320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33320 PYKI01003312.1 Protein Homology CDS 1155 1799 . + 0 ID=cds-TGD36004.1;Parent=gene-C9F07_33320;Dbxref=NCBI_GP:TGD36004.1;Name=TGD36004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=C9F07_33320;product=protein phosphatase CheZ;protein_id=TGD36004.1;transl_table=11 ##sequence-region PYKI01002931.1 1 1798 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002931.1 Genbank region 1 1798 . + . ID=PYKI01002931.1:1..1798;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002931.1 Genbank gene 1 214 . + . ID=gene-C9F07_29360;Name=C9F07_29360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29360;partial=true;start_range=.,1 PYKI01002931.1 Protein Homology CDS 1 214 . + 1 ID=cds-TGD42820.1;Parent=gene-C9F07_29360;Dbxref=NCBI_GP:TGD42820.1;Name=TGD42820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=C9F07_29360;partial=true;product=cysteine synthase A;protein_id=TGD42820.1;start_range=.,1;transl_table=11 PYKI01002931.1 Genbank gene 598 855 . + . ID=gene-C9F07_29365;Name=C9F07_29365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29365 PYKI01002931.1 Protein Homology CDS 598 855 . + 0 ID=cds-TGD42821.1;Parent=gene-C9F07_29365;Dbxref=NCBI_GP:TGD42821.1;Name=TGD42821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=C9F07_29365;product=phosphocarrier protein Hpr;protein_id=TGD42821.1;transl_table=11 PYKI01002931.1 Genbank gene 904 1798 . + . ID=gene-C9F07_29370;Name=ptsP;end_range=1798,.;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=C9F07_29370;partial=true PYKI01002931.1 Protein Homology CDS 904 1798 . + 0 ID=cds-TGD42822.1;Parent=gene-C9F07_29370;Dbxref=NCBI_GP:TGD42822.1;Name=TGD42822.1;end_range=1798,.;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461367.1;locus_tag=C9F07_29370;partial=true;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=TGD42822.1;transl_table=11 ##sequence-region PYKI01001989.1 1 1797 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001989.1 Genbank region 1 1797 . + . ID=PYKI01001989.1:1..1797;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001989.1 Genbank gene 32 628 . + . ID=gene-C9F07_19180;Name=C9F07_19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19180 PYKI01001989.1 Protein Homology CDS 32 628 . + 0 ID=cds-TGD60207.1;Parent=gene-C9F07_19180;Dbxref=NCBI_GP:TGD60207.1;Name=TGD60207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751442.1;locus_tag=C9F07_19180;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=TGD60207.1;transl_table=11 PYKI01001989.1 Genbank gene 702 1797 . + . ID=gene-C9F07_19185;Name=C9F07_19185;end_range=1797,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_19185;partial=true PYKI01001989.1 Protein Homology CDS 702 1797 . + 0 ID=cds-TGD60208.1;Parent=gene-C9F07_19185;Dbxref=NCBI_GP:TGD60208.1;Name=TGD60208.1;end_range=1797,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457565.1;locus_tag=C9F07_19185;partial=true;product=cell division protein FtsP;protein_id=TGD60208.1;transl_table=11 ##sequence-region PYKI01000651.1 1 1791 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000651.1 Genbank region 1 1791 . + . ID=PYKI01000651.1:1..1791;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000651.1 Genbank gene 1 243 . - . ID=gene-C9F07_05635;Name=C9F07_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05635;partial=true;start_range=.,1 PYKI01000651.1 Protein Homology CDS 1 243 . - 0 ID=cds-TGE12409.1;Parent=gene-C9F07_05635;Dbxref=NCBI_GP:TGE12409.1;Name=TGE12409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455989.3;locus_tag=C9F07_05635;partial=true;product=voltage-gated chloride channel;protein_id=TGE12409.1;start_range=.,1;transl_table=11 PYKI01000651.1 Genbank gene 379 1527 . - . ID=gene-C9F07_05640;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=C9F07_05640 PYKI01000651.1 Protein Homology CDS 379 1527 . - 0 ID=cds-TGE12410.1;Parent=gene-C9F07_05640;Dbxref=NCBI_GP:TGE12410.1;Name=TGE12410.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455988.1;locus_tag=C9F07_05640;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=TGE12410.1;transl_table=11 PYKI01000651.1 Genbank pseudogene 1527 1685 . - . ID=gene-C9F07_05645;Name=C9F07_05645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05645;pseudo=true PYKI01000651.1 Protein Homology CDS 1527 1685 . - 0 ID=cds-C9F07_05645;Parent=gene-C9F07_05645;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504841.1;locus_tag=C9F07_05645;product=choline ABC transporter permease;pseudo=true;transl_table=11 ##sequence-region PYKI01001785.1 1 4586 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001785.1 Genbank region 1 4586 . + . ID=PYKI01001785.1:1..4586;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001785.1 Genbank gene 1 4520 . - . ID=gene-C9F07_17150;Name=C9F07_17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17150;partial=true;start_range=.,1 PYKI01001785.1 Protein Homology CDS 1 4520 . - 0 ID=cds-TGD66818.1;Parent=gene-C9F07_17150;Dbxref=NCBI_GP:TGD66818.1;Name=TGD66818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741035.1;locus_tag=C9F07_17150;partial=true;product=Ig-like domain repeat protein;protein_id=TGD66818.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001098.1 1 1790 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001098.1 Genbank region 1 1790 . + . ID=PYKI01001098.1:1..1790;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001098.1 Genbank gene 1 85 . + . ID=gene-C9F07_10240;Name=C9F07_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10240;partial=true;start_range=.,1 PYKI01001098.1 Protein Homology CDS 1 85 . + 1 ID=cds-TGD95306.1;Parent=gene-C9F07_10240;Dbxref=NCBI_GP:TGD95306.1;Name=TGD95306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455947.1;locus_tag=C9F07_10240;partial=true;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=TGD95306.1;start_range=.,1;transl_table=11 PYKI01001098.1 Genbank gene 91 699 . + . ID=gene-C9F07_10245;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=C9F07_10245 PYKI01001098.1 Protein Homology CDS 91 699 . + 0 ID=cds-TGD95307.1;Parent=gene-C9F07_10245;Dbxref=NCBI_GP:TGD95307.1;Name=TGD95307.1;gbkey=CDS;gene=hybD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=C9F07_10245;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=TGD95307.1;transl_table=11 PYKI01001098.1 Genbank gene 699 998 . + . ID=gene-C9F07_10250;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=C9F07_10250 PYKI01001098.1 Protein Homology CDS 699 998 . + 0 ID=cds-TGD95308.1;Parent=gene-C9F07_10250;Dbxref=NCBI_GP:TGD95308.1;Name=TGD95308.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=C9F07_10250;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=TGD95308.1;transl_table=11 PYKI01001098.1 Genbank gene 995 1405 . + . ID=gene-C9F07_10255;Name=C9F07_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10255 PYKI01001098.1 Protein Homology CDS 995 1405 . + 0 ID=cds-TGD95309.1;Parent=gene-C9F07_10255;Dbxref=NCBI_GP:TGD95309.1;Name=TGD95309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455950.1;locus_tag=C9F07_10255;product=hydrogenase;protein_id=TGD95309.1;transl_table=11 PYKI01001098.1 Genbank gene 1423 1790 . + . ID=gene-C9F07_10260;Name=C9F07_10260;end_range=1790,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10260;partial=true PYKI01001098.1 Protein Homology CDS 1423 1790 . + 0 ID=cds-TGD95310.1;Parent=gene-C9F07_10260;Dbxref=NCBI_GP:TGD95310.1;Name=TGD95310.1;end_range=1790,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455951.1;locus_tag=C9F07_10260;partial=true;product=hypothetical protein;protein_id=TGD95310.1;transl_table=11 ##sequence-region PYKI01002264.1 1 1789 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002264.1 Genbank region 1 1789 . + . ID=PYKI01002264.1:1..1789;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002264.1 Genbank gene 1 282 . + . ID=gene-C9F07_22145;Name=C9F07_22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22145;partial=true;start_range=.,1 PYKI01002264.1 Protein Homology CDS 1 282 . + 0 ID=cds-TGD55368.1;Parent=gene-C9F07_22145;Dbxref=NCBI_GP:TGD55368.1;Name=TGD55368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460104.1;locus_tag=C9F07_22145;partial=true;product=hypothetical protein;protein_id=TGD55368.1;start_range=.,1;transl_table=11 PYKI01002264.1 Genbank gene 293 1399 . + . ID=gene-C9F07_22150;Name=C9F07_22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22150 PYKI01002264.1 Protein Homology CDS 293 1399 . + 0 ID=cds-TGD55369.1;Parent=gene-C9F07_22150;Dbxref=NCBI_GP:TGD55369.1;Name=TGD55369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=C9F07_22150;product=gfo/Idh/MocA family oxidoreductase;protein_id=TGD55369.1;transl_table=11 PYKI01002264.1 Genbank pseudogene 1500 1789 . - . ID=gene-C9F07_22155;Name=C9F07_22155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_22155;pseudo=true PYKI01002264.1 Protein Homology CDS 1500 1789 . - 1 ID=cds-C9F07_22155;Parent=gene-C9F07_22155;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000283448.1;locus_tag=C9F07_22155;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002287.1 1 1789 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002287.1 Genbank region 1 1789 . + . ID=PYKI01002287.1:1..1789;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002287.1 Genbank gene 1 427 . + . ID=gene-C9F07_22420;Name=C9F07_22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22420;partial=true;start_range=.,1 PYKI01002287.1 Protein Homology CDS 1 427 . + 1 ID=cds-TGD54829.1;Parent=gene-C9F07_22420;Dbxref=NCBI_GP:TGD54829.1;Name=TGD54829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457734.1;locus_tag=C9F07_22420;partial=true;product=GntR family transcriptional regulator;protein_id=TGD54829.1;start_range=.,1;transl_table=11 PYKI01002287.1 Genbank gene 414 1079 . + . ID=gene-C9F07_22425;Name=C9F07_22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22425 PYKI01002287.1 Protein Homology CDS 414 1079 . + 0 ID=cds-TGD54830.1;Parent=gene-C9F07_22425;Dbxref=NCBI_GP:TGD54830.1;Name=TGD54830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=C9F07_22425;product=GntR family transcriptional regulator;protein_id=TGD54830.1;transl_table=11 PYKI01002287.1 Genbank gene 1290 1789 . + . ID=gene-C9F07_22430;Name=C9F07_22430;end_range=1789,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22430;partial=true PYKI01002287.1 Protein Homology CDS 1290 1789 . + 0 ID=cds-TGD54831.1;Parent=gene-C9F07_22430;Dbxref=NCBI_GP:TGD54831.1;Name=TGD54831.1;end_range=1789,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=C9F07_22430;partial=true;product=cation transporter;protein_id=TGD54831.1;transl_table=11 ##sequence-region PYKI01001365.1 1 1788 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001365.1 Genbank region 1 1788 . + . ID=PYKI01001365.1:1..1788;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001365.1 Genbank pseudogene 1 1274 . - . ID=gene-C9F07_12825;Name=C9F07_12825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12825;pseudo=true PYKI01001365.1 Protein Homology CDS 1 1274 . - 0 ID=cds-C9F07_12825;Parent=gene-C9F07_12825;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462605.1;locus_tag=C9F07_12825;product=murein hydrolase activator EnvC;pseudo=true;transl_table=11 PYKI01001365.1 Genbank pseudogene 1284 1709 . - . ID=gene-C9F07_12830;Name=C9F07_12830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12830;pseudo=true PYKI01001365.1 Protein Homology CDS 1284 1709 . - 0 ID=cds-C9F07_12830;Parent=gene-C9F07_12830;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001583207.1;locus_tag=C9F07_12830;product=phosphoglycerate mutase;pseudo=true;transl_table=11 ##sequence-region PYKI01000733.1 1 1787 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000733.1 Genbank region 1 1787 . + . ID=PYKI01000733.1:1..1787;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000733.1 Genbank gene 1 1787 . + . ID=gene-C9F07_06450;Name=C9F07_06450;end_range=1787,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06450;partial=true;start_range=.,1 PYKI01000733.1 Protein Homology CDS 1 1787 . + 2 ID=cds-TGE10899.1;Parent=gene-C9F07_06450;Dbxref=NCBI_GP:TGE10899.1;Name=TGE10899.1;end_range=1787,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454989.1;locus_tag=C9F07_06450;partial=true;product=exonuclease subunit SbcC;protein_id=TGE10899.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01001615.1 1 1786 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001615.1 Genbank region 1 1786 . + . ID=PYKI01001615.1:1..1786;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001615.1 Genbank gene 1 186 . - . ID=gene-C9F07_15385;Name=C9F07_15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15385;partial=true;start_range=.,1 PYKI01001615.1 Protein Homology CDS 1 186 . - 0 ID=cds-TGD70808.1;Parent=gene-C9F07_15385;Dbxref=NCBI_GP:TGD70808.1;Name=TGD70808.1;Note=electron transport protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458856.1;locus_tag=C9F07_15385;partial=true;product=cytochrome b562;protein_id=TGD70808.1;start_range=.,1;transl_table=11 PYKI01001615.1 Genbank gene 285 1637 . - . ID=gene-C9F07_15390;Name=C9F07_15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15390 PYKI01001615.1 Protein Homology CDS 285 1637 . - 0 ID=cds-TGD70809.1;Parent=gene-C9F07_15390;Dbxref=NCBI_GP:TGD70809.1;Name=TGD70809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458855.1;locus_tag=C9F07_15390;product=metalloprotease PmbA;protein_id=TGD70809.1;transl_table=11 ##sequence-region PYKI01002526.1 1 1785 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002526.1 Genbank region 1 1785 . + . ID=PYKI01002526.1:1..1785;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002526.1 Genbank pseudogene 63 371 . - . ID=gene-C9F07_25070;Name=C9F07_25070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25070;pseudo=true PYKI01002526.1 Protein Homology CDS 63 371 . - 0 ID=cds-C9F07_25070;Parent=gene-C9F07_25070;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=C9F07_25070;product=secretion protein HlyD;pseudo=true;transl_table=11 PYKI01002526.1 Genbank gene 371 1045 . - . ID=gene-C9F07_25075;Name=C9F07_25075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25075 PYKI01002526.1 Protein Homology CDS 371 1045 . - 0 ID=cds-TGD50067.1;Parent=gene-C9F07_25075;Dbxref=NCBI_GP:TGD50067.1;Name=TGD50067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=C9F07_25075;product=transcriptional regulator;protein_id=TGD50067.1;transl_table=11 PYKI01002526.1 Genbank gene 1275 1785 . + . ID=gene-C9F07_25080;Name=C9F07_25080;end_range=1785,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25080;partial=true PYKI01002526.1 Protein Homology CDS 1275 1785 . + 0 ID=cds-TGD50068.1;Parent=gene-C9F07_25080;Dbxref=NCBI_GP:TGD50068.1;Name=TGD50068.1;end_range=1785,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455358.1;locus_tag=C9F07_25080;partial=true;product=hypothetical protein;protein_id=TGD50068.1;transl_table=11 ##sequence-region PYKI01000074.1 1 1785 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000074.1 Genbank region 1 1785 . + . ID=PYKI01000074.1:1..1785;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000074.1 Genbank pseudogene 109 405 . + . ID=gene-C9F07_00450;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=pseudogene;locus_tag=C9F07_00450;pseudo=true PYKI01000074.1 Protein Homology CDS 109 405 . + 0 ID=cds-C9F07_00450;Parent=gene-C9F07_00450;Note=involved in type III protein export during flagellum assembly%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=fliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=C9F07_00450;product=flagellum-specific ATP synthase FliI;pseudo=true;transl_table=11 PYKI01000074.1 Genbank gene 445 888 . + . ID=gene-C9F07_00455;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=C9F07_00455 PYKI01000074.1 Protein Homology CDS 445 888 . + 0 ID=cds-TGE30165.1;Parent=gene-C9F07_00455;Dbxref=NCBI_GP:TGE30165.1;Name=TGE30165.1;Note=rod/hook and filament chaperone;gbkey=CDS;gene=fliJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456534.1;locus_tag=C9F07_00455;product=flagellar biosynthesis chaperone FliJ;protein_id=TGE30165.1;transl_table=11 PYKI01000074.1 Genbank pseudogene 885 1778 . + . ID=gene-C9F07_00460;Name=C9F07_00460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_00460;pseudo=true PYKI01000074.1 Protein Homology CDS 885 1778 . + 0 ID=cds-C9F07_00460;Parent=gene-C9F07_00460;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=C9F07_00460;product=flagellar hook-length control protein FliK;pseudo=true;transl_table=11 ##sequence-region PYKI01000865.1 1 1784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000865.1 Genbank region 1 1784 . + . ID=PYKI01000865.1:1..1784;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000865.1 Genbank gene 1 224 . + . ID=gene-C9F07_07935;Name=C9F07_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07935;partial=true;start_range=.,1 PYKI01000865.1 Protein Homology CDS 1 224 . + 2 ID=cds-TGE05663.1;Parent=gene-C9F07_07935;Dbxref=NCBI_GP:TGE05663.1;Name=TGE05663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455349.1;locus_tag=C9F07_07935;partial=true;product=hypothetical protein;protein_id=TGE05663.1;start_range=.,1;transl_table=11 PYKI01000865.1 Genbank gene 227 469 . - . ID=gene-C9F07_07940;Name=C9F07_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07940 PYKI01000865.1 Protein Homology CDS 227 469 . - 0 ID=cds-TGE05664.1;Parent=gene-C9F07_07940;Dbxref=NCBI_GP:TGE05664.1;Name=TGE05664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000017217.1;locus_tag=C9F07_07940;product=hypothetical protein;protein_id=TGE05664.1;transl_table=11 PYKI01000865.1 Genbank gene 658 1179 . - . ID=gene-C9F07_07945;Name=C9F07_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07945 PYKI01000865.1 Protein Homology CDS 658 1179 . - 0 ID=cds-TGE05665.1;Parent=gene-C9F07_07945;Dbxref=NCBI_GP:TGE05665.1;Name=TGE05665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505441.1;locus_tag=C9F07_07945;product=hypothetical protein;protein_id=TGE05665.1;transl_table=11 PYKI01000865.1 Genbank pseudogene 1326 1510 . + . ID=gene-C9F07_07950;Name=C9F07_07950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07950;pseudo=true PYKI01000865.1 Protein Homology CDS 1326 1510 . + 0 ID=cds-C9F07_07950;Parent=gene-C9F07_07950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682289.1;locus_tag=C9F07_07950;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000865.1 Genbank gene 1511 1784 . - . ID=gene-C9F07_07955;Name=C9F07_07955;end_range=1784,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07955;partial=true PYKI01000865.1 Protein Homology CDS 1511 1784 . - 1 ID=cds-TGE05666.1;Parent=gene-C9F07_07955;Dbxref=NCBI_GP:TGE05666.1;Name=TGE05666.1;end_range=1784,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000373608.1;locus_tag=C9F07_07955;partial=true;product=hypothetical protein;protein_id=TGE05666.1;transl_table=11 ##sequence-region PYKI01001699.1 1 1784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001699.1 Genbank region 1 1784 . + . ID=PYKI01001699.1:1..1784;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001699.1 Genbank gene 1 108 . + . ID=gene-C9F07_16200;Name=C9F07_16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16200;partial=true;start_range=.,1 PYKI01001699.1 Protein Homology CDS 1 108 . + 0 ID=cds-TGD69396.1;Parent=gene-C9F07_16200;Dbxref=NCBI_GP:TGD69396.1;Name=TGD69396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456177.1;locus_tag=C9F07_16200;partial=true;product=50S ribosomal protein L35;protein_id=TGD69396.1;start_range=.,1;transl_table=11 PYKI01001699.1 Genbank gene 159 467 . + . ID=gene-C9F07_16205;Name=C9F07_16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16205 PYKI01001699.1 Protein Homology CDS 159 467 . + 0 ID=cds-TGD69397.1;Parent=gene-C9F07_16205;Dbxref=NCBI_GP:TGD69397.1;Name=TGD69397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=C9F07_16205;product=50S ribosomal protein L20;protein_id=TGD69397.1;transl_table=11 PYKI01001699.1 Genbank gene 636 680 . + . ID=gene-C9F07_16210;Name=C9F07_16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16210 PYKI01001699.1 Protein Homology CDS 636 680 . + 0 ID=cds-TGD69399.1;Parent=gene-C9F07_16210;Dbxref=NCBI_GP:TGD69399.1;Name=TGD69399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416230.1;locus_tag=C9F07_16210;product=phenylalanyl--tRNA ligase operon leader peptide;protein_id=TGD69399.1;transl_table=11 PYKI01001699.1 Genbank gene 817 1784 . + . ID=gene-C9F07_16215;Name=C9F07_16215;end_range=1784,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_16215;partial=true PYKI01001699.1 Protein Homology CDS 817 1784 . + 0 ID=cds-TGD69398.1;Parent=gene-C9F07_16215;Dbxref=NCBI_GP:TGD69398.1;Name=TGD69398.1;end_range=1784,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456174.1;locus_tag=C9F07_16215;partial=true;product=phenylalanine--tRNA ligase subunit alpha;protein_id=TGD69398.1;transl_table=11 ##sequence-region PYKI01000622.1 1 4581 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000622.1 Genbank region 1 4581 . + . ID=PYKI01000622.1:1..4581;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000622.1 Genbank gene 1 171 . + . ID=gene-C9F07_05340;Name=C9F07_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05340;partial=true;start_range=.,1 PYKI01000622.1 Protein Homology CDS 1 171 . + 0 ID=cds-TGE13501.1;Parent=gene-C9F07_05340;Dbxref=NCBI_GP:TGE13501.1;Name=TGE13501.1;Note=major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460341.1;locus_tag=C9F07_05340;partial=true;product=murein lipoprotein;protein_id=TGE13501.1;start_range=.,1;transl_table=11 PYKI01000622.1 Genbank gene 252 491 . + . ID=gene-C9F07_05345;Name=C9F07_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05345 PYKI01000622.1 Protein Homology CDS 252 491 . + 0 ID=cds-TGE13502.1;Parent=gene-C9F07_05345;Dbxref=NCBI_GP:TGE13502.1;Name=TGE13502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460341.1;locus_tag=C9F07_05345;product=major outer membrane lipoprotein;protein_id=TGE13502.1;transl_table=11 PYKI01000622.1 Genbank gene 558 1559 . - . ID=gene-C9F07_05350;Name=C9F07_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05350 PYKI01000622.1 Protein Homology CDS 558 1559 . - 0 ID=cds-TGE13503.1;Parent=gene-C9F07_05350;Dbxref=NCBI_GP:TGE13503.1;Name=TGE13503.1;Note=catalyzes the formation of a meso-diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link in peptidoglycan synthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=C9F07_05350;product=murein L%2CD-transpeptidase;protein_id=TGE13503.1;transl_table=11 PYKI01000622.1 Genbank gene 1714 2130 . - . ID=gene-C9F07_05355;Name=C9F07_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05355 PYKI01000622.1 Protein Homology CDS 1714 2130 . - 0 ID=cds-TGE13504.1;Parent=gene-C9F07_05355;Dbxref=NCBI_GP:TGE13504.1;Name=TGE13504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456150.1;locus_tag=C9F07_05355;product=cysteine desulfuration protein SufE;protein_id=TGE13504.1;transl_table=11 PYKI01000622.1 Genbank gene 2143 3363 . - . ID=gene-C9F07_05360;Name=C9F07_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05360 PYKI01000622.1 Protein Homology CDS 2143 3363 . - 0 ID=cds-TGE13505.1;Parent=gene-C9F07_05360;Dbxref=NCBI_GP:TGE13505.1;Name=TGE13505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456151.1;locus_tag=C9F07_05360;product=cysteine desulfurase;protein_id=TGE13505.1;transl_table=11 PYKI01000622.1 Genbank gene 3360 4526 . - . ID=gene-C9F07_05365;Name=C9F07_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05365 PYKI01000622.1 Protein Homology CDS 3360 4526 . - 0 ID=cds-TGE13506.1;Parent=gene-C9F07_05365;Dbxref=NCBI_GP:TGE13506.1;Name=TGE13506.1;Note=with SufBC activates cysteine desulfurase SufS;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001804766.1;locus_tag=C9F07_05365;product=signal peptide peptidase SppA;protein_id=TGE13506.1;transl_table=11 ##sequence-region PYKI01002984.1 1 9593 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002984.1 Genbank region 1 9593 . + . ID=PYKI01002984.1:1..9593;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002984.1 Genbank gene 1 899 . + . ID=gene-C9F07_29920;Name=C9F07_29920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29920;partial=true;start_range=.,1 PYKI01002984.1 Protein Homology CDS 1 899 . + 2 ID=cds-TGD41424.1;Parent=gene-C9F07_29920;Dbxref=NCBI_GP:TGD41424.1;Name=TGD41424.1;Note=involved in the regulation of length and mediates adhesion;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=C9F07_29920;partial=true;product=fimbrial protein;protein_id=TGD41424.1;start_range=.,1;transl_table=11 PYKI01002984.1 Genbank gene 900 1445 . + . ID=gene-C9F07_29925;Name=C9F07_29925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29925 PYKI01002984.1 Protein Homology CDS 900 1445 . + 0 ID=cds-TGD41425.1;Parent=gene-C9F07_29925;Dbxref=NCBI_GP:TGD41425.1;Name=TGD41425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=C9F07_29925;product=fimbrial protein;protein_id=TGD41425.1;transl_table=11 PYKI01002984.1 Genbank gene 1461 1979 . + . ID=gene-C9F07_29930;Name=C9F07_29930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29930 PYKI01002984.1 Protein Homology CDS 1461 1979 . + 0 ID=cds-TGD41426.1;Parent=gene-C9F07_29930;Dbxref=NCBI_GP:TGD41426.1;Name=TGD41426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454636.1;locus_tag=C9F07_29930;product=fimbrial protein;protein_id=TGD41426.1;transl_table=11 PYKI01002984.1 Genbank gene 1945 2676 . + . ID=gene-C9F07_29935;Name=C9F07_29935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29935 PYKI01002984.1 Protein Homology CDS 1945 2676 . + 0 ID=cds-TGD41427.1;Parent=gene-C9F07_29935;Dbxref=NCBI_GP:TGD41427.1;Name=TGD41427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=C9F07_29935;product=pili assembly chaperone;protein_id=TGD41427.1;transl_table=11 PYKI01002984.1 Genbank gene 2741 3586 . + . ID=gene-C9F07_29940;Name=C9F07_29940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29940 PYKI01002984.1 Protein Homology CDS 2741 3586 . + 0 ID=cds-TGD41428.1;Parent=gene-C9F07_29940;Dbxref=NCBI_GP:TGD41428.1;Name=TGD41428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454638.1;locus_tag=C9F07_29940;product=DsbA family protein;protein_id=TGD41428.1;transl_table=11 PYKI01002984.1 Genbank gene 3625 3912 . + . ID=gene-C9F07_29945;Name=C9F07_29945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29945 PYKI01002984.1 Protein Homology CDS 3625 3912 . + 0 ID=cds-TGD41429.1;Parent=gene-C9F07_29945;Dbxref=NCBI_GP:TGD41429.1;Name=TGD41429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454639.1;locus_tag=C9F07_29945;product=hypothetical protein;protein_id=TGD41429.1;transl_table=11 PYKI01002984.1 Genbank gene 4012 4461 . - . ID=gene-C9F07_29950;Name=C9F07_29950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29950 PYKI01002984.1 Protein Homology CDS 4012 4461 . - 0 ID=cds-TGD41430.1;Parent=gene-C9F07_29950;Dbxref=NCBI_GP:TGD41430.1;Name=TGD41430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454640.1;locus_tag=C9F07_29950;product=transcriptional regulator;protein_id=TGD41430.1;transl_table=11 PYKI01002984.1 Genbank gene 4831 5835 . + . ID=gene-C9F07_29955;Name=C9F07_29955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29955 PYKI01002984.1 Protein Homology CDS 4831 5835 . + 0 ID=cds-TGD41431.1;Parent=gene-C9F07_29955;Dbxref=NCBI_GP:TGD41431.1;Name=TGD41431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459035.1;locus_tag=C9F07_29955;product=LysR family transcriptional regulator;protein_id=TGD41431.1;transl_table=11 PYKI01002984.1 Genbank gene 5843 6280 . - . ID=gene-C9F07_29960;Name=C9F07_29960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29960 PYKI01002984.1 Protein Homology CDS 5843 6280 . - 0 ID=cds-TGD41432.1;Parent=gene-C9F07_29960;Dbxref=NCBI_GP:TGD41432.1;Name=TGD41432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459036.1;locus_tag=C9F07_29960;product=transcriptional regulator;protein_id=TGD41432.1;transl_table=11 PYKI01002984.1 Genbank gene 6803 8521 . + . ID=gene-C9F07_29965;Name=C9F07_29965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29965 PYKI01002984.1 Protein Homology CDS 6803 8521 . + 0 ID=cds-TGD41433.1;Parent=gene-C9F07_29965;Dbxref=NCBI_GP:TGD41433.1;Name=TGD41433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454643.1;locus_tag=C9F07_29965;product=arylsulfatase;protein_id=TGD41433.1;transl_table=11 PYKI01002984.1 Genbank pseudogene 8567 9593 . - . ID=gene-C9F07_29970;Name=C9F07_29970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29970;pseudo=true PYKI01002984.1 Protein Homology CDS 8567 9593 . - 1 ID=cds-C9F07_29970;Parent=gene-C9F07_29970;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454644.1;locus_tag=C9F07_29970;product=multifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase;pseudo=true;transl_table=11 ##sequence-region PYKI01003108.1 1 1783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003108.1 Genbank region 1 1783 . + . ID=PYKI01003108.1:1..1783;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003108.1 Genbank pseudogene 71 1128 . - . ID=gene-C9F07_31120;Name=C9F07_31120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_31120;pseudo=true PYKI01003108.1 Protein Homology CDS 71 1128 . - 0 ID=cds-C9F07_31120;Parent=gene-C9F07_31120;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001354254.1;locus_tag=C9F07_31120;product=excinuclease ABC subunit B;pseudo=true;transl_table=11 ##sequence-region PYKI01001278.1 1 1782 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001278.1 Genbank region 1 1782 . + . ID=PYKI01001278.1:1..1782;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001278.1 Genbank gene 1 570 . - . ID=gene-C9F07_11970;Name=C9F07_11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11970;partial=true;start_range=.,1 PYKI01001278.1 Protein Homology CDS 1 570 . - 0 ID=cds-TGD87816.1;Parent=gene-C9F07_11970;Dbxref=NCBI_GP:TGD87816.1;Name=TGD87816.1;Note=involved in hydrogen uptake;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457545.1;locus_tag=C9F07_11970;partial=true;product=hydrogenase 2 small subunit;protein_id=TGD87816.1;start_range=.,1;transl_table=11 PYKI01001278.1 Genbank gene 578 763 . - . ID=gene-C9F07_11975;Name=C9F07_11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11975 PYKI01001278.1 Protein Homology CDS 578 763 . - 0 ID=cds-TGD87813.1;Parent=gene-C9F07_11975;Dbxref=NCBI_GP:TGD87813.1;Name=TGD87813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519003.1;locus_tag=C9F07_11975;product=hypothetical protein;protein_id=TGD87813.1;transl_table=11 PYKI01001278.1 Genbank gene 760 1047 . - . ID=gene-C9F07_11980;Name=C9F07_11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11980 PYKI01001278.1 Protein Homology CDS 760 1047 . - 0 ID=cds-TGD87814.1;Parent=gene-C9F07_11980;Dbxref=NCBI_GP:TGD87814.1;Name=TGD87814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457546.1;locus_tag=C9F07_11980;product=DUF2623 domain-containing protein;protein_id=TGD87814.1;transl_table=11 PYKI01001278.1 Genbank gene 1132 1782 . - . ID=gene-C9F07_11985;Name=C9F07_11985;end_range=1782,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11985;partial=true PYKI01001278.1 Protein Homology CDS 1132 1782 . - 0 ID=cds-TGD87815.1;Parent=gene-C9F07_11985;Dbxref=NCBI_GP:TGD87815.1;Name=TGD87815.1;end_range=1782,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=C9F07_11985;partial=true;product=methyl-accepting chemotaxis protein I (serine chemoreceptor protein);protein_id=TGD87815.1;transl_table=11 ##sequence-region PYKI01001029.1 1 1781 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001029.1 Genbank region 1 1781 . + . ID=PYKI01001029.1:1..1781;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001029.1 Genbank gene 34 582 . + . ID=gene-C9F07_09485;Name=C9F07_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09485 PYKI01001029.1 Protein Homology CDS 34 582 . + 0 ID=cds-TGD97085.1;Parent=gene-C9F07_09485;Dbxref=NCBI_GP:TGD97085.1;Name=TGD97085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001640213.1;locus_tag=C9F07_09485;product=fimbriae biosynthesis transcriptional regulator FimW;protein_id=TGD97085.1;transl_table=11 PYKI01001029.1 Genbank gene 744 1055 . + . ID=gene-C9F07_09490;Name=C9F07_09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09490 PYKI01001029.1 Protein Homology CDS 744 1055 . + 0 ID=cds-TGD97083.1;Parent=gene-C9F07_09490;Dbxref=NCBI_GP:TGD97083.1;Name=TGD97083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455140.1;locus_tag=C9F07_09490;product=diguanylate cyclase;protein_id=TGD97083.1;transl_table=11 PYKI01001029.1 Genbank gene 1074 1781 . + . ID=gene-C9F07_09495;Name=fimY;end_range=1781,.;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=C9F07_09495;partial=true PYKI01001029.1 Protein Homology CDS 1074 1781 . + 0 ID=cds-TGD97084.1;Parent=gene-C9F07_09495;Dbxref=NCBI_GP:TGD97084.1;Name=TGD97084.1;end_range=1781,.;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455139.1;locus_tag=C9F07_09495;partial=true;product=fimbriae biosynthesis regulator FimY;protein_id=TGD97084.1;transl_table=11 ##sequence-region PYKI01000710.1 1 1781 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000710.1 Genbank region 1 1781 . + . ID=PYKI01000710.1:1..1781;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000710.1 Genbank gene 1 960 . - . ID=gene-C9F07_06225;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=C9F07_06225;partial=true;start_range=.,1 PYKI01000710.1 Protein Homology CDS 1 960 . - 0 ID=cds-TGE11302.1;Parent=gene-C9F07_06225;Dbxref=NCBI_GP:TGE11302.1;Name=TGE11302.1;gbkey=CDS;gene=cydB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=C9F07_06225;partial=true;product=cytochrome d ubiquinol oxidase subunit II;protein_id=TGE11302.1;start_range=.,1;transl_table=11 PYKI01000710.1 Genbank gene 976 1781 . - . ID=gene-C9F07_06230;Name=C9F07_06230;end_range=1781,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06230;partial=true PYKI01000710.1 Protein Homology CDS 976 1781 . - 2 ID=cds-TGE11303.1;Parent=gene-C9F07_06230;Dbxref=NCBI_GP:TGE11303.1;Name=TGE11303.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;end_range=1781,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=C9F07_06230;partial=true;product=cytochrome d terminal oxidase subunit 1;protein_id=TGE11303.1;transl_table=11 ##sequence-region PYKI01003417.1 1 1781 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003417.1 Genbank region 1 1781 . + . ID=PYKI01003417.1:1..1781;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003417.1 Genbank gene 1 1148 . + . ID=gene-C9F07_34370;Name=C9F07_34370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34370;partial=true;start_range=.,1 PYKI01003417.1 Protein Homology CDS 1 1148 . + 2 ID=cds-TGD33680.1;Parent=gene-C9F07_34370;Dbxref=NCBI_GP:TGD33680.1;Name=TGD33680.1;Note=sodium:branched-chain amino acid symporter;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454993.1;locus_tag=C9F07_34370;partial=true;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=TGD33680.1;start_range=.,1;transl_table=11 PYKI01003417.1 Genbank gene 1223 1781 . + . ID=gene-C9F07_34375;Name=proY;end_range=1781,.;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=C9F07_34375;partial=true PYKI01003417.1 Protein Homology CDS 1223 1781 . + 0 ID=cds-TGD33681.1;Parent=gene-C9F07_34375;Dbxref=NCBI_GP:TGD33681.1;Name=TGD33681.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;end_range=1781,.;gbkey=CDS;gene=proY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=C9F07_34375;partial=true;product=proline-specific permease ProY;protein_id=TGD33681.1;transl_table=11 ##sequence-region PYKI01000614.1 1 1778 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000614.1 Genbank region 1 1778 . + . ID=PYKI01000614.1:1..1778;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000614.1 Genbank pseudogene 79 1197 . + . ID=gene-C9F07_05275;Name=C9F07_05275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05275;pseudo=true PYKI01000614.1 Protein Homology CDS 79 1197 . + 0 ID=cds-C9F07_05275;Parent=gene-C9F07_05275;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455241.1;locus_tag=C9F07_05275;product=asparagine synthase B;pseudo=true;transl_table=11 PYKI01000614.1 Genbank gene 1420 1496 . + . ID=gene-C9F07_05280;Name=C9F07_05280;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_05280 PYKI01000614.1 tRNAscan-SE tRNA 1420 1496 . + . ID=rna-C9F07_05280;Parent=gene-C9F07_05280;anticodon=(pos:1454..1456);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_05280;product=tRNA-Met PYKI01000614.1 tRNAscan-SE exon 1420 1496 . + . ID=exon-C9F07_05280-1;Parent=rna-C9F07_05280;anticodon=(pos:1454..1456);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_05280;product=tRNA-Met PYKI01000614.1 Genbank gene 1505 1589 . + . ID=gene-C9F07_05285;Name=C9F07_05285;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_05285 PYKI01000614.1 tRNAscan-SE tRNA 1505 1589 . + . ID=rna-C9F07_05285;Parent=gene-C9F07_05285;anticodon=(pos:1539..1541);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_05285;product=tRNA-Leu PYKI01000614.1 tRNAscan-SE exon 1505 1589 . + . ID=exon-C9F07_05285-1;Parent=rna-C9F07_05285;anticodon=(pos:1539..1541);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_05285;product=tRNA-Leu PYKI01000614.1 Genbank gene 1613 1687 . + . ID=gene-C9F07_05290;Name=C9F07_05290;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_05290 PYKI01000614.1 tRNAscan-SE tRNA 1613 1687 . + . ID=rna-C9F07_05290;Parent=gene-C9F07_05290;anticodon=(pos:1645..1647);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_05290;product=tRNA-Gln PYKI01000614.1 tRNAscan-SE exon 1613 1687 . + . ID=exon-C9F07_05290-1;Parent=rna-C9F07_05290;anticodon=(pos:1645..1647);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_05290;product=tRNA-Gln PYKI01000614.1 Genbank gene 1703 1776 . + . ID=gene-C9F07_05295;Name=C9F07_05295;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_05295 PYKI01000614.1 tRNAscan-SE tRNA 1703 1776 . + . ID=rna-C9F07_05295;Parent=gene-C9F07_05295;anticodon=(pos:1737..1739);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_05295;product=tRNA-Met PYKI01000614.1 tRNAscan-SE exon 1703 1776 . + . ID=exon-C9F07_05295-1;Parent=rna-C9F07_05295;anticodon=(pos:1737..1739);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_05295;product=tRNA-Met ##sequence-region PYKI01002566.1 1 1778 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002566.1 Genbank region 1 1778 . + . ID=PYKI01002566.1:1..1778;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002566.1 Genbank gene 1 1143 . + . ID=gene-C9F07_25475;Name=C9F07_25475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25475;partial=true;start_range=.,1 PYKI01002566.1 Protein Homology CDS 1 1143 . + 0 ID=cds-TGD49824.1;Parent=gene-C9F07_25475;Dbxref=NCBI_GP:TGD49824.1;Name=TGD49824.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=C9F07_25475;partial=true;product=multidrug transporter subunit MdtC;protein_id=TGD49824.1;start_range=.,1;transl_table=11 PYKI01002566.1 Genbank pseudogene 1140 1694 . + . ID=gene-C9F07_25480;Name=C9F07_25480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25480;pseudo=true PYKI01002566.1 Protein Homology CDS 1140 1694 . + 0 ID=cds-C9F07_25480;Parent=gene-C9F07_25480;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=C9F07_25480;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002709.1 1 1775 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002709.1 Genbank region 1 1775 . + . ID=PYKI01002709.1:1..1775;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002709.1 Genbank pseudogene 64 1302 . - . ID=gene-C9F07_27015;Name=C9F07_27015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27015;pseudo=true PYKI01002709.1 Protein Homology CDS 64 1302 . - 0 ID=cds-C9F07_27015;Parent=gene-C9F07_27015;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=C9F07_27015;product=putative transporter;pseudo=true;transl_table=11 PYKI01002709.1 Genbank gene 1491 1775 . - . ID=gene-C9F07_27020;Name=C9F07_27020;end_range=1775,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27020;partial=true PYKI01002709.1 Protein Homology CDS 1491 1775 . - 0 ID=cds-TGD48030.1;Parent=gene-C9F07_27020;Dbxref=NCBI_GP:TGD48030.1;Name=TGD48030.1;end_range=1775,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=C9F07_27020;partial=true;product=hypothetical protein;protein_id=TGD48030.1;transl_table=11 ##sequence-region PYKI01000630.1 1 1774 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000630.1 Genbank region 1 1774 . + . ID=PYKI01000630.1:1..1774;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000630.1 Genbank pseudogene 1 1595 . + . ID=gene-C9F07_05430;Name=C9F07_05430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_05430;pseudo=true PYKI01000630.1 Protein Homology CDS 1 1595 . + 2 ID=cds-C9F07_05430;Parent=gene-C9F07_05430;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=C9F07_05430;product=fimbrial protein;pseudo=true;transl_table=11 PYKI01000630.1 Genbank gene 1610 1774 . + . ID=gene-C9F07_05435;Name=fimH;end_range=1774,.;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=C9F07_05435;partial=true PYKI01000630.1 Protein Homology CDS 1610 1774 . + 0 ID=cds-TGE13396.1;Parent=gene-C9F07_05435;Dbxref=NCBI_GP:TGE13396.1;Name=TGE13396.1;Note=involved in the regulation of fimbriae length and mediates adhesion of type 1 fimbriae;end_range=1774,.;gbkey=CDS;gene=fimH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455136.1;locus_tag=C9F07_05435;partial=true;product=adhesin;protein_id=TGE13396.1;transl_table=11 ##sequence-region PYKI01000853.1 1 4579 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000853.1 Genbank region 1 4579 . + . ID=PYKI01000853.1:1..4579;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000853.1 Genbank gene 1 657 . - . ID=gene-C9F07_07790;Name=C9F07_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07790;partial=true;start_range=.,1 PYKI01000853.1 Protein Homology CDS 1 657 . - 0 ID=cds-TGE05969.1;Parent=gene-C9F07_07790;Dbxref=NCBI_GP:TGE05969.1;Name=TGE05969.1;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460619.3;locus_tag=C9F07_07790;partial=true;product=transcriptional regulator FNR;protein_id=TGE05969.1;start_range=.,1;transl_table=11 PYKI01000853.1 Genbank gene 850 1326 . - . ID=gene-C9F07_07795;Name=C9F07_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07795 PYKI01000853.1 Protein Homology CDS 850 1326 . - 0 ID=cds-TGE05970.1;Parent=gene-C9F07_07795;Dbxref=NCBI_GP:TGE05970.1;Name=TGE05970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455845.1;locus_tag=C9F07_07795;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=TGE05970.1;transl_table=11 PYKI01000853.1 Genbank gene 1584 2147 . + . ID=gene-C9F07_07800;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=C9F07_07800 PYKI01000853.1 Protein Homology CDS 1584 2147 . + 0 ID=cds-TGE05971.1;Parent=gene-C9F07_07800;Dbxref=NCBI_GP:TGE05971.1;Name=TGE05971.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=C9F07_07800;product=DNA endonuclease SmrA;protein_id=TGE05971.1;transl_table=11 PYKI01000853.1 Genbank gene 2128 2307 . + . ID=gene-C9F07_07805;Name=C9F07_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_07805 PYKI01000853.1 Protein Homology CDS 2128 2307 . + 0 ID=cds-TGE05972.1;Parent=gene-C9F07_07805;Dbxref=NCBI_GP:TGE05972.1;Name=TGE05972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662499.1;locus_tag=C9F07_07805;product=hypothetical protein;protein_id=TGE05972.1;transl_table=11 PYKI01000853.1 Genbank pseudogene 2558 3712 . + . ID=gene-C9F07_07810;Name=C9F07_07810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07810;pseudo=true PYKI01000853.1 Protein Homology CDS 2558 3712 . + 0 ID=cds-C9F07_07810;Parent=gene-C9F07_07810;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=C9F07_07810;product=chemoreceptor protein;pseudo=true;transl_table=11 PYKI01000853.1 Genbank pseudogene 3858 4469 . + . ID=gene-C9F07_07815;Name=C9F07_07815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_07815;pseudo=true PYKI01000853.1 Protein Homology CDS 3858 4469 . + 0 ID=cds-C9F07_07815;Parent=gene-C9F07_07815;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455848.1;locus_tag=C9F07_07815;product=zinc transporter ZntB;pseudo=true;transl_table=11 ##sequence-region PYKI01003263.1 1 1772 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003263.1 Genbank region 1 1772 . + . ID=PYKI01003263.1:1..1772;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003263.1 Genbank gene 220 1772 . - . ID=gene-C9F07_32820;Name=clpA;end_range=1772,.;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=C9F07_32820;partial=true PYKI01003263.1 Protein Homology CDS 220 1772 . - 2 ID=cds-TGD36239.1;Parent=gene-C9F07_32820;Dbxref=NCBI_GP:TGD36239.1;Name=TGD36239.1;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;end_range=1772,.;gbkey=CDS;gene=clpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=C9F07_32820;partial=true;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=TGD36239.1;transl_table=11 ##sequence-region PYKI01003267.1 1 1772 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003267.1 Genbank region 1 1772 . + . ID=PYKI01003267.1:1..1772;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003267.1 Genbank pseudogene 20 292 . - . ID=gene-C9F07_32840;Name=C9F07_32840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32840;pseudo=true PYKI01003267.1 Protein Homology CDS 20 292 . - 0 ID=cds-C9F07_32840;Parent=gene-C9F07_32840;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=C9F07_32840;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01003267.1 Genbank gene 346 537 . + . ID=gene-C9F07_32845;Name=C9F07_32845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32845 PYKI01003267.1 Protein Homology CDS 346 537 . + 0 ID=cds-TGD36215.1;Parent=gene-C9F07_32845;Dbxref=NCBI_GP:TGD36215.1;Name=TGD36215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507507.1;locus_tag=C9F07_32845;product=hypothetical protein;protein_id=TGD36215.1;transl_table=11 PYKI01003267.1 Genbank pseudogene 588 769 . - . ID=gene-C9F07_32850;Name=C9F07_32850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32850;pseudo=true PYKI01003267.1 Protein Homology CDS 588 769 . - 0 ID=cds-C9F07_32850;Parent=gene-C9F07_32850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830812.1;locus_tag=C9F07_32850;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01003267.1 Genbank gene 780 1037 . + . ID=gene-C9F07_32855;Name=C9F07_32855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32855 PYKI01003267.1 Protein Homology CDS 780 1037 . + 0 ID=cds-TGD36216.1;Parent=gene-C9F07_32855;Dbxref=NCBI_GP:TGD36216.1;Name=TGD36216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458926.1;locus_tag=C9F07_32855;product=hypothetical protein;protein_id=TGD36216.1;transl_table=11 PYKI01003267.1 Genbank pseudogene 1042 1746 . + . ID=gene-C9F07_32860;Name=C9F07_32860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_32860;pseudo=true PYKI01003267.1 Protein Homology CDS 1042 1746 . + 0 ID=cds-C9F07_32860;Parent=gene-C9F07_32860;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=C9F07_32860;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 ##sequence-region PYKI01000984.1 1 1770 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000984.1 Genbank region 1 1770 . + . ID=PYKI01000984.1:1..1770;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000984.1 Genbank gene 2 517 . - . ID=gene-C9F07_08980;Name=C9F07_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08980 PYKI01000984.1 Protein Homology CDS 2 517 . - 0 ID=cds-TGD99546.1;Parent=gene-C9F07_08980;Dbxref=NCBI_GP:TGD99546.1;Name=TGD99546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001306160.1;locus_tag=C9F07_08980;product=MFS transporter;protein_id=TGD99546.1;transl_table=11 PYKI01000984.1 Genbank gene 654 1412 . - . ID=gene-C9F07_08985;Name=C9F07_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08985 PYKI01000984.1 Protein Homology CDS 654 1412 . - 0 ID=cds-TGD99547.1;Parent=gene-C9F07_08985;Dbxref=NCBI_GP:TGD99547.1;Name=TGD99547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310506.1;locus_tag=C9F07_08985;product=DeoR/GlpR transcriptional regulator;protein_id=TGD99547.1;transl_table=11 PYKI01000984.1 Genbank gene 1542 1770 . - . ID=gene-C9F07_08990;Name=C9F07_08990;end_range=1770,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08990;partial=true PYKI01000984.1 Protein Homology CDS 1542 1770 . - 1 ID=cds-TGD99548.1;Parent=gene-C9F07_08990;Dbxref=NCBI_GP:TGD99548.1;Name=TGD99548.1;end_range=1770,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782140.1;locus_tag=C9F07_08990;partial=true;product=aldo/keto reductase;protein_id=TGD99548.1;transl_table=11 ##sequence-region PYKI01002396.1 1 1769 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002396.1 Genbank region 1 1769 . + . ID=PYKI01002396.1:1..1769;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002396.1 Genbank gene 1 751 . - . ID=gene-C9F07_23585;Name=C9F07_23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23585;partial=true;start_range=.,1 PYKI01002396.1 Protein Homology CDS 1 751 . - 0 ID=cds-TGD52025.1;Parent=gene-C9F07_23585;Dbxref=NCBI_GP:TGD52025.1;Name=TGD52025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=C9F07_23585;partial=true;product=MFS transporter;protein_id=TGD52025.1;start_range=.,1;transl_table=11 PYKI01002396.1 Genbank gene 1212 1475 . - . ID=gene-C9F07_23590;Name=C9F07_23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23590 PYKI01002396.1 Protein Homology CDS 1212 1475 . - 0 ID=cds-TGD52024.1;Parent=gene-C9F07_23590;Dbxref=NCBI_GP:TGD52024.1;Name=TGD52024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454654.1;locus_tag=C9F07_23590;product=30S ribosomal protein S20;protein_id=TGD52024.1;transl_table=11 PYKI01002396.1 Genbank gene 1581 1769 . + . ID=gene-C9F07_23595;Name=C9F07_23595;end_range=1769,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23595;partial=true PYKI01002396.1 Protein Homology CDS 1581 1769 . + 0 ID=cds-TGD52026.1;Parent=gene-C9F07_23595;Dbxref=NCBI_GP:TGD52026.1;Name=TGD52026.1;end_range=1769,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454655.1;locus_tag=C9F07_23595;partial=true;product=DUF2575 domain-containing protein;protein_id=TGD52026.1;transl_table=11 ##sequence-region PYKI01001135.1 1 1767 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001135.1 Genbank region 1 1767 . + . ID=PYKI01001135.1:1..1767;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001135.1 Genbank gene 1 368 . + . ID=gene-C9F07_10580;Name=C9F07_10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10580;partial=true;start_range=.,1 PYKI01001135.1 Protein Homology CDS 1 368 . + 2 ID=cds-TGD94639.1;Parent=gene-C9F07_10580;Dbxref=NCBI_GP:TGD94639.1;Name=TGD94639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457255.1;locus_tag=C9F07_10580;partial=true;product=iron ABC transporter substrate-binding protein;protein_id=TGD94639.1;start_range=.,1;transl_table=11 PYKI01001135.1 Genbank gene 365 1186 . + . ID=gene-C9F07_10585;Name=C9F07_10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10585 PYKI01001135.1 Protein Homology CDS 365 1186 . + 0 ID=cds-TGD94640.1;Parent=gene-C9F07_10585;Dbxref=NCBI_GP:TGD94640.1;Name=TGD94640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=C9F07_10585;product=manganese/iron ABC transporter ATP-binding protein;protein_id=TGD94640.1;transl_table=11 PYKI01001135.1 Genbank pseudogene 1183 1716 . + . ID=gene-C9F07_10590;Name=C9F07_10590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_10590;pseudo=true PYKI01001135.1 Protein Homology CDS 1183 1716 . + 0 ID=cds-C9F07_10590;Parent=gene-C9F07_10590;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=C9F07_10590;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000725.1 1 1767 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000725.1 Genbank region 1 1767 . + . ID=PYKI01000725.1:1..1767;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000725.1 Genbank gene 1 281 . - . ID=gene-C9F07_06365;Name=C9F07_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06365;partial=true;start_range=.,1 PYKI01000725.1 Protein Homology CDS 1 281 . - 0 ID=cds-TGE11105.1;Parent=gene-C9F07_06365;Dbxref=NCBI_GP:TGE11105.1;Name=TGE11105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456939.1;locus_tag=C9F07_06365;partial=true;product=histidine kinase;protein_id=TGE11105.1;start_range=.,1;transl_table=11 PYKI01000725.1 Genbank gene 278 1471 . - . ID=gene-C9F07_06370;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=C9F07_06370 PYKI01000725.1 Protein Homology CDS 278 1471 . - 0 ID=cds-TGE11106.1;Parent=gene-C9F07_06370;Dbxref=NCBI_GP:TGE11106.1;Name=TGE11106.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456940.1;locus_tag=C9F07_06370;product=phosphoglycerate transport regulator PgtC;protein_id=TGE11106.1;transl_table=11 ##sequence-region PYKI01002837.1 1 1765 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002837.1 Genbank region 1 1765 . + . ID=PYKI01002837.1:1..1765;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002837.1 Genbank pseudogene 1 240 . + . ID=gene-C9F07_28370;Name=C9F07_28370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_28370;pseudo=true PYKI01002837.1 Protein Homology CDS 1 240 . + 0 ID=cds-C9F07_28370;Parent=gene-C9F07_28370;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=C9F07_28370;product=NAD-dependent protein deacylase;pseudo=true;transl_table=11 PYKI01002837.1 Genbank gene 322 1368 . - . ID=gene-C9F07_28375;Name=C9F07_28375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28375 PYKI01002837.1 Protein Homology CDS 322 1368 . - 0 ID=cds-TGD45576.1;Parent=gene-C9F07_28375;Dbxref=NCBI_GP:TGD45576.1;Name=TGD45576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=C9F07_28375;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=TGD45576.1;transl_table=11 PYKI01002837.1 Genbank pseudogene 1393 1765 . - . ID=gene-C9F07_28380;Name=potC;gbkey=Gene;gene=potC;gene_biotype=pseudogene;locus_tag=C9F07_28380;pseudo=true PYKI01002837.1 Protein Homology CDS 1393 1765 . - 1 ID=cds-C9F07_28380;Parent=gene-C9F07_28380;Note=can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotC is a membrane component%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;gene=potC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455715.1;locus_tag=C9F07_28380;product=spermidine/putrescine ABC transporter permease PotC;pseudo=true;transl_table=11 ##sequence-region PYKI01003298.1 1 1764 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003298.1 Genbank region 1 1764 . + . ID=PYKI01003298.1:1..1764;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003298.1 Genbank gene 1 986 . + . ID=gene-C9F07_33160;Name=C9F07_33160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33160;partial=true;start_range=.,1 PYKI01003298.1 Protein Homology CDS 1 986 . + 2 ID=cds-TGD36060.1;Parent=gene-C9F07_33160;Dbxref=NCBI_GP:TGD36060.1;Name=TGD36060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=C9F07_33160;partial=true;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta;protein_id=TGD36060.1;start_range=.,1;transl_table=11 PYKI01003298.1 Genbank gene 1161 1764 . - . ID=gene-C9F07_33165;Name=tqsA;end_range=1764,.;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;gene_synonym=ydgG;locus_tag=C9F07_33165;partial=true PYKI01003298.1 Protein Homology CDS 1161 1764 . - 1 ID=cds-TGD36061.1;Parent=gene-C9F07_33165;Dbxref=NCBI_GP:TGD36061.1;Name=TGD36061.1;Note=transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes;end_range=1764,.;gbkey=CDS;gene=tqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455999.1;locus_tag=C9F07_33165;partial=true;product=pheromone autoinducer 2 transporter;protein_id=TGD36061.1;transl_table=11 ##sequence-region PYKI01000475.1 1 1764 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000475.1 Genbank region 1 1764 . + . ID=PYKI01000475.1:1..1764;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000475.1 Genbank gene 1 531 . - . ID=gene-C9F07_03775;Name=C9F07_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03775;partial=true;start_range=.,1 PYKI01000475.1 Protein Homology CDS 1 531 . - 0 ID=cds-TGE19232.1;Parent=gene-C9F07_03775;Dbxref=NCBI_GP:TGE19232.1;Name=TGE19232.1;Note=with LptBGC is involved in lipopolysaccharide export;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458896.1;locus_tag=C9F07_03775;partial=true;product=LPS export ABC transporter permease LptF;protein_id=TGE19232.1;start_range=.,1;transl_table=11 PYKI01000475.1 Genbank pseudogene 494 689 . + . ID=gene-C9F07_03780;Name=C9F07_03780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03780;pseudo=true PYKI01000475.1 Protein Homology CDS 494 689 . + 0 ID=cds-C9F07_03780;Parent=gene-C9F07_03780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134316.1;locus_tag=C9F07_03780;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000475.1 Genbank gene 763 882 . + . ID=gene-C9F07_03785;Name=C9F07_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03785 PYKI01000475.1 Protein Homology CDS 763 882 . + 0 ID=cds-TGE19230.1;Parent=gene-C9F07_03785;Dbxref=NCBI_GP:TGE19230.1;Name=TGE19230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463338.1;locus_tag=C9F07_03785;product=hypothetical protein;protein_id=TGE19230.1;transl_table=11 PYKI01000475.1 Genbank gene 926 1764 . + . ID=gene-C9F07_03790;Name=C9F07_03790;end_range=1764,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03790;partial=true PYKI01000475.1 Protein Homology CDS 926 1764 . + 0 ID=cds-TGE19231.1;Parent=gene-C9F07_03790;Dbxref=NCBI_GP:TGE19231.1;Name=TGE19231.1;Note=catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;end_range=1764,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458895.1;locus_tag=C9F07_03790;partial=true;product=leucyl aminopeptidase;protein_id=TGE19231.1;transl_table=11 ##sequence-region PYKI01002473.1 1 1763 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002473.1 Genbank region 1 1763 . + . ID=PYKI01002473.1:1..1763;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002473.1 Genbank gene 1 333 . - . ID=gene-C9F07_24420;Name=C9F07_24420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24420;partial=true;start_range=.,1 PYKI01002473.1 Protein Homology CDS 1 333 . - 0 ID=cds-TGD50580.1;Parent=gene-C9F07_24420;Dbxref=NCBI_GP:TGD50580.1;Name=TGD50580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455030.1;locus_tag=C9F07_24420;partial=true;product=MFS transporter;protein_id=TGD50580.1;start_range=.,1;transl_table=11 PYKI01002473.1 Genbank gene 554 1444 . - . ID=gene-C9F07_24425;Name=C9F07_24425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24425 PYKI01002473.1 Protein Homology CDS 554 1444 . - 0 ID=cds-TGD50581.1;Parent=gene-C9F07_24425;Dbxref=NCBI_GP:TGD50581.1;Name=TGD50581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=C9F07_24425;product=protoheme IX farnesyltransferase;protein_id=TGD50581.1;transl_table=11 PYKI01002473.1 Genbank gene 1456 1704 . - . ID=gene-C9F07_24430;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=C9F07_24430 PYKI01002473.1 Protein Homology CDS 1456 1704 . - 0 ID=cds-TGD50582.1;Parent=gene-C9F07_24430;Dbxref=NCBI_GP:TGD50582.1;Name=TGD50582.1;gbkey=CDS;gene=cyoD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001336140.1;locus_tag=C9F07_24430;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=TGD50582.1;transl_table=11 ##sequence-region PYKI01003374.1 1 1761 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003374.1 Genbank region 1 1761 . + . ID=PYKI01003374.1:1..1761;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003374.1 Genbank gene 1 615 . + . ID=gene-C9F07_33985;Name=C9F07_33985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33985;partial=true;start_range=.,1 PYKI01003374.1 Protein Homology CDS 1 615 . + 0 ID=cds-TGD34441.1;Parent=gene-C9F07_33985;Dbxref=NCBI_GP:TGD34441.1;Name=TGD34441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=C9F07_33985;partial=true;product=carboxymethylenebutenolidase;protein_id=TGD34441.1;start_range=.,1;transl_table=11 PYKI01003374.1 Genbank gene 695 1761 . - . ID=gene-C9F07_33990;Name=C9F07_33990;end_range=1761,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33990;partial=true PYKI01003374.1 Protein Homology CDS 695 1761 . - 2 ID=cds-TGD34442.1;Parent=gene-C9F07_33990;Dbxref=NCBI_GP:TGD34442.1;Name=TGD34442.1;end_range=1761,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=C9F07_33990;partial=true;product=anaerobic sulfatase maturase;protein_id=TGD34442.1;transl_table=11 ##sequence-region PYKI01001872.1 1 1759 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001872.1 Genbank region 1 1759 . + . ID=PYKI01001872.1:1..1759;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001872.1 Genbank gene 1 387 . - . ID=gene-C9F07_18010;Name=C9F07_18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18010;partial=true;start_range=.,1 PYKI01001872.1 Protein Homology CDS 1 387 . - 0 ID=cds-TGD62601.1;Parent=gene-C9F07_18010;Dbxref=NCBI_GP:TGD62601.1;Name=TGD62601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459884.1;locus_tag=C9F07_18010;partial=true;product=endolysin;protein_id=TGD62601.1;start_range=.,1;transl_table=11 PYKI01001872.1 Genbank gene 387 668 . - . ID=gene-C9F07_18015;Name=C9F07_18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18015 PYKI01001872.1 Protein Homology CDS 387 668 . - 0 ID=cds-TGD62602.1;Parent=gene-C9F07_18015;Dbxref=NCBI_GP:TGD62602.1;Name=TGD62602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455519.1;locus_tag=C9F07_18015;product=phage holin family protein;protein_id=TGD62602.1;transl_table=11 PYKI01001872.1 Genbank gene 655 1044 . - . ID=gene-C9F07_18020;Name=C9F07_18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18020 PYKI01001872.1 Protein Homology CDS 655 1044 . - 0 ID=cds-TGD62603.1;Parent=gene-C9F07_18020;Dbxref=NCBI_GP:TGD62603.1;Name=TGD62603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455518.1;locus_tag=C9F07_18020;product=hypothetical protein;protein_id=TGD62603.1;transl_table=11 PYKI01001872.1 Genbank gene 1134 1322 . - . ID=gene-C9F07_18025;Name=C9F07_18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18025 PYKI01001872.1 Protein Homology CDS 1134 1322 . - 0 ID=cds-TGD62604.1;Parent=gene-C9F07_18025;Dbxref=NCBI_GP:TGD62604.1;Name=TGD62604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016152723.1;locus_tag=C9F07_18025;product=hypothetical protein;protein_id=TGD62604.1;transl_table=11 PYKI01001872.1 Genbank gene 1377 1565 . + . ID=gene-C9F07_18030;Name=C9F07_18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18030 PYKI01001872.1 Protein Homology CDS 1377 1565 . + 0 ID=cds-TGD62605.1;Parent=gene-C9F07_18030;Dbxref=NCBI_GP:TGD62605.1;Name=TGD62605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001158478.1;locus_tag=C9F07_18030;product=hypothetical protein;protein_id=TGD62605.1;transl_table=11 ##sequence-region PYKI01001314.1 1 1759 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001314.1 Genbank region 1 1759 . + . ID=PYKI01001314.1:1..1759;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001314.1 Genbank pseudogene 69 1457 . - . ID=gene-C9F07_12290;Name=C9F07_12290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12290;pseudo=true PYKI01001314.1 Protein Homology CDS 69 1457 . - 0 ID=cds-C9F07_12290;Parent=gene-C9F07_12290;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=C9F07_12290;product=molecular chaperone HtpG;pseudo=true;transl_table=11 PYKI01001314.1 Genbank gene 1580 1759 . - . ID=gene-C9F07_12295;Name=recR;end_range=1759,.;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=C9F07_12295;partial=true PYKI01001314.1 Protein Homology CDS 1580 1759 . - 0 ID=cds-TGD86424.1;Parent=gene-C9F07_12295;Dbxref=NCBI_GP:TGD86424.1;Name=TGD86424.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;end_range=1759,.;gbkey=CDS;gene=recR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455082.1;locus_tag=C9F07_12295;partial=true;product=recombination protein RecR;protein_id=TGD86424.1;transl_table=11 ##sequence-region PYKI01002896.1 1 1756 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002896.1 Genbank region 1 1756 . + . ID=PYKI01002896.1:1..1756;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002896.1 Genbank gene 1 405 . + . ID=gene-C9F07_28990;Name=C9F07_28990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28990;partial=true;start_range=.,1 PYKI01002896.1 Protein Homology CDS 1 405 . + 0 ID=cds-TGD44007.1;Parent=gene-C9F07_28990;Dbxref=NCBI_GP:TGD44007.1;Name=TGD44007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=C9F07_28990;partial=true;product=50S ribosomal protein L6;protein_id=TGD44007.1;start_range=.,1;transl_table=11 PYKI01002896.1 Genbank gene 415 768 . + . ID=gene-C9F07_28995;Name=C9F07_28995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28995 PYKI01002896.1 Protein Homology CDS 415 768 . + 0 ID=cds-TGD44008.1;Parent=gene-C9F07_28995;Dbxref=NCBI_GP:TGD44008.1;Name=TGD44008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=C9F07_28995;product=50S ribosomal protein L18;protein_id=TGD44008.1;transl_table=11 PYKI01002896.1 Genbank gene 783 1286 . + . ID=gene-C9F07_29000;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=C9F07_29000 PYKI01002896.1 Protein Homology CDS 783 1286 . + 0 ID=cds-TGD44009.1;Parent=gene-C9F07_29000;Dbxref=NCBI_GP:TGD44009.1;Name=TGD44009.1;gbkey=CDS;gene=rpsE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=C9F07_29000;product=30S ribosomal protein S5;protein_id=TGD44009.1;transl_table=11 PYKI01002896.1 Genbank gene 1290 1469 . + . ID=gene-C9F07_29005;Name=C9F07_29005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29005 PYKI01002896.1 Protein Homology CDS 1290 1469 . + 0 ID=cds-TGD44010.1;Parent=gene-C9F07_29005;Dbxref=NCBI_GP:TGD44010.1;Name=TGD44010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=C9F07_29005;product=50S ribosomal protein L30;protein_id=TGD44010.1;transl_table=11 PYKI01002896.1 Genbank pseudogene 1473 1685 . + . ID=gene-C9F07_29010;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=pseudogene;locus_tag=C9F07_29010;pseudo=true PYKI01002896.1 Protein Homology CDS 1473 1685 . + 0 ID=cds-C9F07_29010;Parent=gene-C9F07_29010;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=rplO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=C9F07_29010;product=50S ribosomal protein L15;pseudo=true;transl_table=11 ##sequence-region PYKI01000336.1 1 1756 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000336.1 Genbank region 1 1756 . + . ID=PYKI01000336.1:1..1756;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000336.1 Genbank gene 1 881 . + . ID=gene-C9F07_02435;Name=C9F07_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02435;partial=true;start_range=.,1 PYKI01000336.1 Protein Homology CDS 1 881 . + 2 ID=cds-TGE26846.1;Parent=gene-C9F07_02435;Dbxref=NCBI_GP:TGE26846.1;Name=TGE26846.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=C9F07_02435;partial=true;product=phosphoenolpyruvate synthase;protein_id=TGE26846.1;start_range=.,1;transl_table=11 PYKI01000336.1 Genbank gene 981 1739 . - . ID=gene-C9F07_02440;Name=C9F07_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02440 PYKI01000336.1 Protein Homology CDS 981 1739 . - 0 ID=cds-TGE26847.1;Parent=gene-C9F07_02440;Dbxref=NCBI_GP:TGE26847.1;Name=TGE26847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456161.1;locus_tag=C9F07_02440;product=type I 3-dehydroquinate dehydratase;protein_id=TGE26847.1;transl_table=11 ##sequence-region PYKI01003337.1 1 1706 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003337.1 Genbank region 1 1706 . + . ID=PYKI01003337.1:1..1706;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003337.1 Genbank gene 1 1151 . + . ID=gene-C9F07_33565;Name=C9F07_33565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33565;partial=true;start_range=.,1 PYKI01003337.1 Protein Homology CDS 1 1151 . + 2 ID=cds-TGD35087.1;Parent=gene-C9F07_33565;Dbxref=NCBI_GP:TGD35087.1;Name=TGD35087.1;Note=catalyzes the formation of 4-aminobutanoate from 4-aminobutanal%3B involved in putrescine degradation;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455900.3;locus_tag=C9F07_33565;partial=true;product=gamma-aminobutyraldehyde dehydrogenase;protein_id=TGD35087.1;start_range=.,1;transl_table=11 PYKI01003337.1 Genbank gene 1256 1351 . - . ID=gene-C9F07_33570;Name=C9F07_33570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33570 PYKI01003337.1 Protein Homology CDS 1256 1351 . - 0 ID=cds-TGD35088.1;Parent=gene-C9F07_33570;Dbxref=NCBI_GP:TGD35088.1;Name=TGD35088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=C9F07_33570;product=stress response membrane protein YncL;protein_id=TGD35088.1;transl_table=11 PYKI01003337.1 Genbank gene 1460 1678 . + . ID=gene-C9F07_33575;Name=C9F07_33575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33575 PYKI01003337.1 Protein Homology CDS 1460 1678 . + 0 ID=cds-TGD35089.1;Parent=gene-C9F07_33575;Dbxref=NCBI_GP:TGD35089.1;Name=TGD35089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460555.1;locus_tag=C9F07_33575;product=hypothetical protein;protein_id=TGD35089.1;transl_table=11 ##sequence-region PYKI01000356.1 1 1750 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000356.1 Genbank region 1 1750 . + . ID=PYKI01000356.1:1..1750;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000356.1 Genbank gene 130 1407 . - . ID=gene-C9F07_02690;Name=C9F07_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_02690 PYKI01000356.1 Protein Homology CDS 130 1407 . - 0 ID=cds-TGE26177.1;Parent=gene-C9F07_02690;Dbxref=NCBI_GP:TGE26177.1;Name=TGE26177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=C9F07_02690;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=TGE26177.1;transl_table=11 PYKI01000356.1 Genbank pseudogene 1404 1750 . - . ID=gene-C9F07_02695;Name=C9F07_02695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_02695;pseudo=true PYKI01000356.1 Protein Homology CDS 1404 1750 . - 2 ID=cds-C9F07_02695;Parent=gene-C9F07_02695;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458556.1;locus_tag=C9F07_02695;product=type-I secretion protein;pseudo=true;transl_table=11 ##sequence-region PYKI01001356.1 1 1750 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001356.1 Genbank region 1 1750 . + . ID=PYKI01001356.1:1..1750;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001356.1 Genbank gene 1 356 . + . ID=gene-C9F07_12730;Name=C9F07_12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12730;partial=true;start_range=.,1 PYKI01001356.1 Protein Homology CDS 1 356 . + 2 ID=cds-TGD85066.1;Parent=gene-C9F07_12730;Dbxref=NCBI_GP:TGD85066.1;Name=TGD85066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456660.1;locus_tag=C9F07_12730;partial=true;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=TGD85066.1;start_range=.,1;transl_table=11 PYKI01001356.1 Genbank gene 331 1545 . + . ID=gene-C9F07_12735;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=C9F07_12735 PYKI01001356.1 Protein Homology CDS 331 1545 . + 0 ID=cds-TGD85067.1;Parent=gene-C9F07_12735;Dbxref=NCBI_GP:TGD85067.1;Name=TGD85067.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=C9F07_12735;product=putative colanic acid polymerase WcaD;protein_id=TGD85067.1;transl_table=11 PYKI01001356.1 Genbank gene 1558 1750 . + . ID=gene-C9F07_12740;Name=C9F07_12740;end_range=1750,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12740;partial=true PYKI01001356.1 Protein Homology CDS 1558 1750 . + 0 ID=cds-TGD85068.1;Parent=gene-C9F07_12740;Dbxref=NCBI_GP:TGD85068.1;Name=TGD85068.1;end_range=1750,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456659.1;locus_tag=C9F07_12740;partial=true;product=hypothetical protein;protein_id=TGD85068.1;transl_table=11 ##sequence-region PYKI01003339.1 1 1749 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003339.1 Genbank region 1 1749 . + . ID=PYKI01003339.1:1..1749;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003339.1 Genbank gene 1 315 . + . ID=gene-C9F07_33585;Name=C9F07_33585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33585;partial=true;start_range=.,1 PYKI01003339.1 Protein Homology CDS 1 315 . + 0 ID=cds-TGD35081.1;Parent=gene-C9F07_33585;Dbxref=NCBI_GP:TGD35081.1;Name=TGD35081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456099.1;locus_tag=C9F07_33585;partial=true;product=superoxide dismutase;protein_id=TGD35081.1;start_range=.,1;transl_table=11 PYKI01003339.1 Genbank gene 398 487 . - . ID=gene-C9F07_33590;Name=ynhF;gbkey=Gene;gene=ynhF;gene_biotype=protein_coding;locus_tag=C9F07_33590 PYKI01003339.1 Protein Homology CDS 398 487 . - 0 ID=cds-TGD35082.1;Parent=gene-C9F07_33590;Dbxref=NCBI_GP:TGD35082.1;Name=TGD35082.1;gbkey=CDS;gene=ynhF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=C9F07_33590;product=YnhF family membrane protein;protein_id=TGD35082.1;transl_table=11 PYKI01003339.1 Genbank pseudogene 573 783 . + . ID=gene-C9F07_33595;Name=C9F07_33595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_33595;pseudo=true PYKI01003339.1 Protein Homology CDS 573 783 . + 0 ID=cds-C9F07_33595;Parent=gene-C9F07_33595;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001332824.1;locus_tag=C9F07_33595;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01003339.1 Genbank gene 783 1749 . + . ID=gene-C9F07_33600;Name=C9F07_33600;end_range=1749,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33600;partial=true PYKI01003339.1 Protein Homology CDS 783 1749 . + 0 ID=cds-TGD35083.1;Parent=gene-C9F07_33600;Dbxref=NCBI_GP:TGD35083.1;Name=TGD35083.1;end_range=1749,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=C9F07_33600;partial=true;product=HTH-type transcriptional repressor PurR;protein_id=TGD35083.1;transl_table=11 ##sequence-region PYKI01002723.1 1 4521 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002723.1 Genbank region 1 4521 . + . ID=PYKI01002723.1:1..4521;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002723.1 Genbank gene 1 339 . - . ID=gene-C9F07_27165;Name=C9F07_27165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27165;partial=true;start_range=.,1 PYKI01002723.1 Protein Homology CDS 1 339 . - 0 ID=cds-TGD47551.1;Parent=gene-C9F07_27165;Dbxref=NCBI_GP:TGD47551.1;Name=TGD47551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456601.1;locus_tag=C9F07_27165;partial=true;product=hypothetical protein;protein_id=TGD47551.1;start_range=.,1;transl_table=11 PYKI01002723.1 Genbank gene 351 1745 . - . ID=gene-C9F07_27170;Name=C9F07_27170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27170 PYKI01002723.1 Protein Homology CDS 351 1745 . - 0 ID=cds-TGD47552.1;Parent=gene-C9F07_27170;Dbxref=NCBI_GP:TGD47552.1;Name=TGD47552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=C9F07_27170;product=aldehyde dehydrogenase EutE;protein_id=TGD47552.1;transl_table=11 PYKI01002723.1 Genbank gene 1742 2752 . - . ID=gene-C9F07_27175;Name=C9F07_27175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27175 PYKI01002723.1 Protein Homology CDS 1742 2752 . - 0 ID=cds-TGD47553.1;Parent=gene-C9F07_27175;Dbxref=NCBI_GP:TGD47553.1;Name=TGD47553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456599.1;locus_tag=C9F07_27175;product=ATP:cob(I)alamin adenosyltransferase;protein_id=TGD47553.1;transl_table=11 PYKI01002723.1 Genbank gene 2762 3037 . - . ID=gene-C9F07_27180;Name=C9F07_27180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27180 PYKI01002723.1 Protein Homology CDS 2762 3037 . - 0 ID=cds-TGD47554.1;Parent=gene-C9F07_27180;Dbxref=NCBI_GP:TGD47554.1;Name=TGD47554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002413060.1;locus_tag=C9F07_27180;product=ethanolamine utilization protein EutN;protein_id=TGD47554.1;transl_table=11 PYKI01002723.1 Genbank gene 3041 3532 . - . ID=gene-C9F07_27185;Name=C9F07_27185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27185 PYKI01002723.1 Protein Homology CDS 3041 3532 . - 0 ID=cds-TGD47555.1;Parent=gene-C9F07_27185;Dbxref=NCBI_GP:TGD47555.1;Name=TGD47555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=C9F07_27185;product=microcompartment protein PduM;protein_id=TGD47555.1;transl_table=11 PYKI01002723.1 Genbank gene 3529 4161 . - . ID=gene-C9F07_27190;Name=C9F07_27190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27190 PYKI01002723.1 Protein Homology CDS 3529 4161 . - 0 ID=cds-TGD47556.1;Parent=gene-C9F07_27190;Dbxref=NCBI_GP:TGD47556.1;Name=TGD47556.1;Note=catalyzes the formation of propionyl phosphate from propionyl-CoA in propanediol degradation;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456597.1;locus_tag=C9F07_27190;product=propanediol utilization protein;protein_id=TGD47556.1;transl_table=11 PYKI01002723.1 Genbank gene 4161 4521 . - . ID=gene-C9F07_27195;Name=C9F07_27195;end_range=4521,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27195;partial=true PYKI01002723.1 Protein Homology CDS 4161 4521 . - 1 ID=cds-TGD47557.1;Parent=gene-C9F07_27195;Dbxref=NCBI_GP:TGD47557.1;Name=TGD47557.1;end_range=4521,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=C9F07_27195;partial=true;product=microcompartment protein;protein_id=TGD47557.1;transl_table=11 ##sequence-region PYKI01001946.1 1 1748 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001946.1 Genbank region 1 1748 . + . ID=PYKI01001946.1:1..1748;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001946.1 Genbank gene 1 196 . - . ID=gene-C9F07_18745;Name=C9F07_18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18745;partial=true;start_range=.,1 PYKI01001946.1 Protein Homology CDS 1 196 . - 0 ID=cds-TGD60605.1;Parent=gene-C9F07_18745;Dbxref=NCBI_GP:TGD60605.1;Name=TGD60605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457309.1;locus_tag=C9F07_18745;partial=true;product=transcriptional regulator;protein_id=TGD60605.1;start_range=.,1;transl_table=11 PYKI01001946.1 Genbank gene 367 960 . + . ID=gene-C9F07_18750;Name=C9F07_18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18750 PYKI01001946.1 Protein Homology CDS 367 960 . + 0 ID=cds-TGD60606.1;Parent=gene-C9F07_18750;Dbxref=NCBI_GP:TGD60606.1;Name=TGD60606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134854.1;locus_tag=C9F07_18750;product=phenolic acid decarboxylase;protein_id=TGD60606.1;transl_table=11 PYKI01001946.1 Genbank gene 960 1748 . + . ID=gene-C9F07_18755;Name=C9F07_18755;end_range=1748,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18755;partial=true PYKI01001946.1 Protein Homology CDS 960 1748 . + 0 ID=cds-TGD60607.1;Parent=gene-C9F07_18755;Dbxref=NCBI_GP:TGD60607.1;Name=TGD60607.1;end_range=1748,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457311.1;locus_tag=C9F07_18755;partial=true;product=hypothetical protein;protein_id=TGD60607.1;transl_table=11 ##sequence-region PYKI01001229.1 1 1747 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001229.1 Genbank region 1 1747 . + . ID=PYKI01001229.1:1..1747;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001229.1 Genbank gene 1 533 . - . ID=gene-C9F07_11500;Name=C9F07_11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11500;partial=true;start_range=.,1 PYKI01001229.1 Protein Homology CDS 1 533 . - 0 ID=cds-TGD91032.1;Parent=gene-C9F07_11500;Dbxref=NCBI_GP:TGD91032.1;Name=TGD91032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454806.1;locus_tag=C9F07_11500;partial=true;product=hypothetical protein;protein_id=TGD91032.1;start_range=.,1;transl_table=11 PYKI01001229.1 Genbank gene 674 1747 . - . ID=gene-C9F07_11505;Name=C9F07_11505;end_range=1747,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_11505;partial=true PYKI01001229.1 Protein Homology CDS 674 1747 . - 0 ID=cds-TGD91033.1;Parent=gene-C9F07_11505;Dbxref=NCBI_GP:TGD91033.1;Name=TGD91033.1;Note=similar in sequence to the ATP-dependent RNA helicase HrpA;end_range=1747,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454805.3;locus_tag=C9F07_11505;partial=true;product=ATP-dependent RNA helicase HrpB;protein_id=TGD91033.1;transl_table=11 ##sequence-region PYKI01001963.1 1 1746 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001963.1 Genbank region 1 1746 . + . ID=PYKI01001963.1:1..1746;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001963.1 Genbank gene 1 1746 . - . ID=gene-C9F07_18940;Name=C9F07_18940;end_range=1746,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18940;partial=true;start_range=.,1 PYKI01001963.1 Protein Homology CDS 1 1746 . - 2 ID=cds-TGD60382.1;Parent=gene-C9F07_18940;Dbxref=NCBI_GP:TGD60382.1;Name=TGD60382.1;end_range=1746,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150470.1;locus_tag=C9F07_18940;partial=true;product=phage tail protein;protein_id=TGD60382.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01003014.1 1 1746 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003014.1 Genbank region 1 1746 . + . ID=PYKI01003014.1:1..1746;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003014.1 Genbank gene 1 816 . - . ID=gene-C9F07_30220;Name=C9F07_30220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30220;partial=true;start_range=.,1 PYKI01003014.1 Protein Homology CDS 1 816 . - 0 ID=cds-TGD41171.1;Parent=gene-C9F07_30220;Dbxref=NCBI_GP:TGD41171.1;Name=TGD41171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121936.1;locus_tag=C9F07_30220;partial=true;product=sulfate ABC transporter substrate-binding protein;protein_id=TGD41171.1;start_range=.,1;transl_table=11 PYKI01003014.1 Genbank gene 974 1746 . - . ID=gene-C9F07_30225;Name=C9F07_30225;end_range=1746,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30225;partial=true PYKI01003014.1 Protein Homology CDS 974 1746 . - 2 ID=cds-TGD41172.1;Parent=gene-C9F07_30225;Dbxref=NCBI_GP:TGD41172.1;Name=TGD41172.1;end_range=1746,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456980.1;locus_tag=C9F07_30225;partial=true;product=oxidoreductase UcpA;protein_id=TGD41172.1;transl_table=11 ##sequence-region PYKI01001170.1 1 1743 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001170.1 Genbank region 1 1743 . + . ID=PYKI01001170.1:1..1743;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001170.1 Genbank gene 1 254 . + . ID=gene-C9F07_10925;Name=C9F07_10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10925;partial=true;start_range=.,1 PYKI01001170.1 Protein Homology CDS 1 254 . + 2 ID=cds-TGD93032.1;Parent=gene-C9F07_10925;Dbxref=NCBI_GP:TGD93032.1;Name=TGD93032.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454623.1;locus_tag=C9F07_10925;partial=true;product=molecular chaperone DnaJ;protein_id=TGD93032.1;start_range=.,1;transl_table=11 PYKI01001170.1 Genbank gene 535 1482 . + . ID=gene-C9F07_10930;Name=C9F07_10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_10930 PYKI01001170.1 Protein Homology CDS 535 1482 . + 0 ID=cds-TGD93033.1;Parent=gene-C9F07_10930;Dbxref=NCBI_GP:TGD93033.1;Name=TGD93033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454624.1;locus_tag=C9F07_10930;product=LysR family transcriptional regulator;protein_id=TGD93033.1;transl_table=11 ##sequence-region PYKI01003551.1 1 1743 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003551.1 Genbank region 1 1743 . + . ID=PYKI01003551.1:1..1743;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003551.1 Genbank gene 1 405 . - . ID=gene-C9F07_35855;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=C9F07_35855;partial=true;start_range=.,1 PYKI01003551.1 Protein Homology CDS 1 405 . - 0 ID=cds-TGD30712.1;Parent=gene-C9F07_35855;Dbxref=NCBI_GP:TGD30712.1;Name=TGD30712.1;gbkey=CDS;gene=narI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004593559.1;locus_tag=C9F07_35855;partial=true;product=respiratory nitrate reductase subunit gamma;protein_id=TGD30712.1;start_range=.,1;transl_table=11 PYKI01003551.1 Genbank gene 405 1115 . - . ID=gene-C9F07_35860;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=C9F07_35860 PYKI01003551.1 Protein Homology CDS 405 1115 . - 0 ID=cds-TGD30713.1;Parent=gene-C9F07_35860;Dbxref=NCBI_GP:TGD30713.1;Name=TGD30713.1;gbkey=CDS;gene=narJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=C9F07_35860;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=TGD30713.1;transl_table=11 PYKI01003551.1 Genbank gene 1112 1743 . - . ID=gene-C9F07_35865;Name=narH;end_range=1743,.;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=C9F07_35865;partial=true PYKI01003551.1 Protein Homology CDS 1112 1743 . - 2 ID=cds-TGD30714.1;Parent=gene-C9F07_35865;Dbxref=NCBI_GP:TGD30714.1;Name=TGD30714.1;Note=with NarGJI catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high;end_range=1743,.;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455740.1;locus_tag=C9F07_35865;partial=true;product=nitrate reductase subunit beta;protein_id=TGD30714.1;transl_table=11 ##sequence-region PYKI01003514.1 1 1741 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003514.1 Genbank region 1 1741 . + . ID=PYKI01003514.1:1..1741;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003514.1 Genbank gene 1 946 . - . ID=gene-C9F07_35455;Name=C9F07_35455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35455;partial=true;start_range=.,1 PYKI01003514.1 Protein Homology CDS 1 946 . - 0 ID=cds-TGD31707.1;Parent=gene-C9F07_35455;Dbxref=NCBI_GP:TGD31707.1;Name=TGD31707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456287.1;locus_tag=C9F07_35455;partial=true;product=glutamyl-tRNA reductase;protein_id=TGD31707.1;start_range=.,1;transl_table=11 PYKI01003514.1 Genbank pseudogene 1260 1718 . + . ID=gene-C9F07_35460;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=pseudogene;locus_tag=C9F07_35460;pseudo=true PYKI01003514.1 Protein Homology CDS 1260 1718 . + 0 ID=cds-C9F07_35460;Parent=gene-C9F07_35460;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=lolB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016495805.1;locus_tag=C9F07_35460;product=outer membrane lipoprotein LolB;pseudo=true;transl_table=11 ##sequence-region PYKI01003408.1 1 1738 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003408.1 Genbank region 1 1738 . + . ID=PYKI01003408.1:1..1738;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003408.1 Genbank gene 53 1099 . - . ID=gene-C9F07_34255;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=C9F07_34255 PYKI01003408.1 Protein Homology CDS 53 1099 . - 0 ID=cds-TGD33893.1;Parent=gene-C9F07_34255;Dbxref=NCBI_GP:TGD33893.1;Name=TGD33893.1;Note=required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457469.1;locus_tag=C9F07_34255;product=erythrose-4-phosphate dehydrogenase;protein_id=TGD33893.1;transl_table=11 PYKI01003408.1 Genbank gene 1270 1470 . + . ID=gene-C9F07_34260;Name=C9F07_34260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34260 PYKI01003408.1 Protein Homology CDS 1270 1470 . + 0 ID=cds-TGD33894.1;Parent=gene-C9F07_34260;Dbxref=NCBI_GP:TGD33894.1;Name=TGD33894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219219.1;locus_tag=C9F07_34260;product=hypothetical protein;protein_id=TGD33894.1;transl_table=11 PYKI01003408.1 Genbank gene 1473 1738 . + . ID=gene-C9F07_34265;Name=C9F07_34265;end_range=1738,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34265;partial=true PYKI01003408.1 Protein Homology CDS 1473 1738 . + 0 ID=cds-TGD33895.1;Parent=gene-C9F07_34265;Dbxref=NCBI_GP:TGD33895.1;Name=TGD33895.1;end_range=1738,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457470.1;locus_tag=C9F07_34265;partial=true;product=DUF296 domain-containing protein;protein_id=TGD33895.1;transl_table=11 ##sequence-region PYKI01001282.1 1 1736 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001282.1 Genbank region 1 1736 . + . ID=PYKI01001282.1:1..1736;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001282.1 Genbank pseudogene 61 1137 . - . ID=gene-C9F07_12020;Name=C9F07_12020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_12020;pseudo=true PYKI01001282.1 Protein Homology CDS 61 1137 . - 0 ID=cds-C9F07_12020;Parent=gene-C9F07_12020;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=C9F07_12020;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;pseudo=true;transl_table=11 PYKI01001282.1 Genbank gene 1134 1736 . - . ID=gene-C9F07_12025;Name=C9F07_12025;end_range=1736,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12025;partial=true PYKI01001282.1 Protein Homology CDS 1134 1736 . - 0 ID=cds-TGD87749.1;Parent=gene-C9F07_12025;Dbxref=NCBI_GP:TGD87749.1;Name=TGD87749.1;end_range=1736,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456843.1;locus_tag=C9F07_12025;partial=true;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=TGD87749.1;transl_table=11 ##sequence-region PYKI01003395.1 1 1730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003395.1 Genbank region 1 1730 . + . ID=PYKI01003395.1:1..1730;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003395.1 Genbank gene 1 490 . - . ID=gene-C9F07_34140;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=C9F07_34140;partial=true;start_range=.,1 PYKI01003395.1 Protein Homology CDS 1 490 . - 0 ID=cds-TGD34017.1;Parent=gene-C9F07_34140;Dbxref=NCBI_GP:TGD34017.1;Name=TGD34017.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456531.1;locus_tag=C9F07_34140;partial=true;product=flagellar motor switch protein FliG;protein_id=TGD34017.1;start_range=.,1;transl_table=11 PYKI01003395.1 Genbank gene 483 1730 . - . ID=gene-C9F07_34145;Name=fliF;end_range=1730,.;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=C9F07_34145;partial=true PYKI01003395.1 Protein Homology CDS 483 1730 . - 0 ID=cds-TGD34018.1;Parent=gene-C9F07_34145;Dbxref=NCBI_GP:TGD34018.1;Name=TGD34018.1;end_range=1730,.;gbkey=CDS;gene=fliF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=C9F07_34145;partial=true;product=flagellar M-ring protein FliF;protein_id=TGD34018.1;transl_table=11 ##sequence-region PYKI01001624.1 1 4509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001624.1 Genbank region 1 4509 . + . ID=PYKI01001624.1:1..4509;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001624.1 Genbank pseudogene 135 1109 . + . ID=gene-C9F07_15485;Name=C9F07_15485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15485;pseudo=true PYKI01001624.1 Protein Homology CDS 135 1109 . + 0 ID=cds-C9F07_15485;Parent=gene-C9F07_15485;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458279.1;locus_tag=C9F07_15485;product=glyoxylate/hydroxypyruvate reductase GhrB;pseudo=true;transl_table=11 PYKI01001624.1 Genbank gene 1159 1869 . - . ID=gene-C9F07_15490;Name=C9F07_15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15490 PYKI01001624.1 Protein Homology CDS 1159 1869 . - 0 ID=cds-TGD70608.1;Parent=gene-C9F07_15490;Dbxref=NCBI_GP:TGD70608.1;Name=TGD70608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458278.1;locus_tag=C9F07_15490;product=DUF3053 domain-containing protein;protein_id=TGD70608.1;transl_table=11 PYKI01001624.1 Genbank gene 2308 2598 . + . ID=gene-C9F07_15495;Name=C9F07_15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15495 PYKI01001624.1 Protein Homology CDS 2308 2598 . + 0 ID=cds-TGD70609.1;Parent=gene-C9F07_15495;Dbxref=NCBI_GP:TGD70609.1;Name=TGD70609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=C9F07_15495;product=transcriptional regulator;protein_id=TGD70609.1;transl_table=11 PYKI01001624.1 Genbank gene 2886 3098 . + . ID=gene-C9F07_15500;Name=C9F07_15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15500 PYKI01001624.1 Protein Homology CDS 2886 3098 . + 0 ID=cds-TGD70610.1;Parent=gene-C9F07_15500;Dbxref=NCBI_GP:TGD70610.1;Name=TGD70610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=C9F07_15500;product=cold-shock protein;protein_id=TGD70610.1;transl_table=11 PYKI01001624.1 Genbank gene 3271 3810 . + . ID=gene-C9F07_15505;Name=C9F07_15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15505 PYKI01001624.1 Protein Homology CDS 3271 3810 . + 0 ID=cds-TGD70611.1;Parent=gene-C9F07_15505;Dbxref=NCBI_GP:TGD70611.1;Name=TGD70611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458275.1;locus_tag=C9F07_15505;product=hypothetical protein;protein_id=TGD70611.1;transl_table=11 PYKI01001624.1 Genbank gene 4181 4509 . - . ID=gene-C9F07_15510;Name=C9F07_15510;end_range=4509,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15510;partial=true PYKI01001624.1 Protein Homology CDS 4181 4509 . - 2 ID=cds-TGD70612.1;Parent=gene-C9F07_15510;Dbxref=NCBI_GP:TGD70612.1;Name=TGD70612.1;end_range=4509,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462552.1;locus_tag=C9F07_15510;partial=true;product=GNAT family N-acetyltransferase;protein_id=TGD70612.1;transl_table=11 ##sequence-region PYKI01002693.1 1 1729 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002693.1 Genbank region 1 1729 . + . ID=PYKI01002693.1:1..1729;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002693.1 Genbank gene 1 206 . + . ID=gene-C9F07_26850;Name=C9F07_26850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26850;partial=true;start_range=.,1 PYKI01002693.1 Protein Homology CDS 1 206 . + 2 ID=cds-TGD48289.1;Parent=gene-C9F07_26850;Dbxref=NCBI_GP:TGD48289.1;Name=TGD48289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455330.1;locus_tag=C9F07_26850;partial=true;product=formimidoylglutamase;protein_id=TGD48289.1;start_range=.,1;transl_table=11 PYKI01002693.1 Genbank gene 251 976 . + . ID=gene-C9F07_26855;Name=C9F07_26855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26855 PYKI01002693.1 Protein Homology CDS 251 976 . + 0 ID=cds-TGD48290.1;Parent=gene-C9F07_26855;Dbxref=NCBI_GP:TGD48290.1;Name=TGD48290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455331.1;locus_tag=C9F07_26855;product=histidine utilization repressor;protein_id=TGD48290.1;transl_table=11 PYKI01002693.1 Genbank gene 1173 1729 . + . ID=gene-C9F07_26860;Name=C9F07_26860;end_range=1729,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26860;partial=true PYKI01002693.1 Protein Homology CDS 1173 1729 . + 0 ID=cds-TGD48291.1;Parent=gene-C9F07_26860;Dbxref=NCBI_GP:TGD48291.1;Name=TGD48291.1;Note=catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism;end_range=1729,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455332.1;locus_tag=C9F07_26860;partial=true;product=urocanate hydratase;protein_id=TGD48291.1;transl_table=11 ##sequence-region PYKI01002177.1 1 1728 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002177.1 Genbank region 1 1728 . + . ID=PYKI01002177.1:1..1728;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002177.1 Genbank gene 1 202 . - . ID=gene-C9F07_21145;Name=C9F07_21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21145;partial=true;start_range=.,1 PYKI01002177.1 Protein Homology CDS 1 202 . - 0 ID=cds-TGD56832.1;Parent=gene-C9F07_21145;Dbxref=NCBI_GP:TGD56832.1;Name=TGD56832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458593.1;locus_tag=C9F07_21145;partial=true;product=arginine:agmatine antiporter;protein_id=TGD56832.1;start_range=.,1;transl_table=11 PYKI01002177.1 Genbank gene 342 1103 . - . ID=gene-C9F07_21150;Name=C9F07_21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21150 PYKI01002177.1 Protein Homology CDS 342 1103 . - 0 ID=cds-TGD56833.1;Parent=gene-C9F07_21150;Dbxref=NCBI_GP:TGD56833.1;Name=TGD56833.1;Note=regulates genes involved in arginine decarboxylase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458594.1;locus_tag=C9F07_21150;product=AraC family transcriptional regulator;protein_id=TGD56833.1;transl_table=11 PYKI01002177.1 Genbank gene 1401 1728 . - . ID=gene-C9F07_21155;Name=C9F07_21155;end_range=1728,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21155;partial=true PYKI01002177.1 Protein Homology CDS 1401 1728 . - 1 ID=cds-TGD56834.1;Parent=gene-C9F07_21155;Dbxref=NCBI_GP:TGD56834.1;Name=TGD56834.1;end_range=1728,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418541.2;locus_tag=C9F07_21155;partial=true;product=hypothetical protein;protein_id=TGD56834.1;transl_table=11 ##sequence-region PYKI01000650.1 1 1728 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000650.1 Genbank region 1 1728 . + . ID=PYKI01000650.1:1..1728;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000650.1 Genbank gene 1 548 . + . ID=gene-C9F07_05625;Name=C9F07_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_05625;partial=true;start_range=.,1 PYKI01000650.1 Protein Homology CDS 1 548 . + 2 ID=cds-TGE12420.1;Parent=gene-C9F07_05625;Dbxref=NCBI_GP:TGE12420.1;Name=TGE12420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000867129.1;locus_tag=C9F07_05625;partial=true;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=TGE12420.1;start_range=.,1;transl_table=11 PYKI01000650.1 Genbank gene 684 1643 . + . ID=gene-C9F07_05630;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=C9F07_05630 PYKI01000650.1 Protein Homology CDS 684 1643 . + 0 ID=cds-TGE12421.1;Parent=gene-C9F07_05630;Dbxref=NCBI_GP:TGE12421.1;Name=TGE12421.1;gbkey=CDS;gene=pstC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458090.1;locus_tag=C9F07_05630;product=phosphate ABC transporter permease subunit PstC;protein_id=TGE12421.1;transl_table=11 ##sequence-region PYKI01003390.1 1 1727 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003390.1 Genbank region 1 1727 . + . ID=PYKI01003390.1:1..1727;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003390.1 Genbank pseudogene 72 722 . + . ID=gene-C9F07_34100;Name=C9F07_34100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34100;pseudo=true PYKI01003390.1 Protein Homology CDS 72 722 . + 0 ID=cds-C9F07_34100;Parent=gene-C9F07_34100;Note=with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate%3B subunit Z may act as a chaperone for the Y subunit%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=C9F07_34100;product=tagatose-bisphosphate aldolase;pseudo=true;transl_table=11 PYKI01003390.1 Genbank gene 737 1201 . + . ID=gene-C9F07_34105;Name=C9F07_34105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34105 PYKI01003390.1 Protein Homology CDS 737 1201 . + 0 ID=cds-TGD34148.1;Parent=gene-C9F07_34105;Dbxref=NCBI_GP:TGD34148.1;Name=TGD34148.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=C9F07_34105;product=PTS galactitol transporter subunit IIA;protein_id=TGD34148.1;transl_table=11 PYKI01003390.1 Genbank gene 1232 1516 . + . ID=gene-C9F07_34110;Name=C9F07_34110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34110 PYKI01003390.1 Protein Homology CDS 1232 1516 . + 0 ID=cds-TGD34149.1;Parent=gene-C9F07_34110;Dbxref=NCBI_GP:TGD34149.1;Name=TGD34149.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457643.1;locus_tag=C9F07_34110;product=PTS galactitol transporter subunit IIB;protein_id=TGD34149.1;transl_table=11 PYKI01003390.1 Genbank gene 1520 1727 . + . ID=gene-C9F07_34115;Name=C9F07_34115;end_range=1727,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34115;partial=true PYKI01003390.1 Protein Homology CDS 1520 1727 . + 0 ID=cds-TGD34150.1;Parent=gene-C9F07_34115;Dbxref=NCBI_GP:TGD34150.1;Name=TGD34150.1;end_range=1727,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457644.1;locus_tag=C9F07_34115;partial=true;product=hypothetical protein;protein_id=TGD34150.1;transl_table=11 ##sequence-region PYKI01002503.1 1 1727 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002503.1 Genbank region 1 1727 . + . ID=PYKI01002503.1:1..1727;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002503.1 Genbank gene 1 644 . + . ID=gene-C9F07_24780;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=C9F07_24780;partial=true;start_range=.,1 PYKI01002503.1 Protein Homology CDS 1 644 . + 2 ID=cds-TGD50248.1;Parent=gene-C9F07_24780;Dbxref=NCBI_GP:TGD50248.1;Name=TGD50248.1;Note=catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid;gbkey=CDS;gene=wecC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457826.1;locus_tag=C9F07_24780;partial=true;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=TGD50248.1;start_range=.,1;transl_table=11 PYKI01002503.1 Genbank gene 644 1727 . + . ID=gene-C9F07_24785;Name=C9F07_24785;end_range=1727,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_24785;partial=true PYKI01002503.1 Protein Homology CDS 644 1727 . + 0 ID=cds-TGD50249.1;Parent=gene-C9F07_24785;Dbxref=NCBI_GP:TGD50249.1;Name=TGD50249.1;end_range=1727,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457825.1;locus_tag=C9F07_24785;partial=true;product=dTDP-glucose 4%2C6-dehydratase;protein_id=TGD50249.1;transl_table=11 ##sequence-region PYKI01001653.1 1 1726 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001653.1 Genbank region 1 1726 . + . ID=PYKI01001653.1:1..1726;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001653.1 Genbank gene 104 742 . - . ID=gene-C9F07_15775;Name=C9F07_15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15775 PYKI01001653.1 Protein Homology CDS 104 742 . - 0 ID=cds-TGD70241.1;Parent=gene-C9F07_15775;Dbxref=NCBI_GP:TGD70241.1;Name=TGD70241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=C9F07_15775;product=DUF1007 domain-containing protein;protein_id=TGD70241.1;transl_table=11 PYKI01001653.1 Genbank pseudogene 868 1686 . + . ID=gene-C9F07_15780;Name=C9F07_15780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15780;pseudo=true PYKI01001653.1 Protein Homology CDS 868 1686 . + 0 ID=cds-C9F07_15780;Parent=gene-C9F07_15780;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=C9F07_15780;product=stationary phase inducible protein CsiE;pseudo=true;transl_table=11 ##sequence-region PYKI01002834.1 1 1726 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002834.1 Genbank region 1 1726 . + . ID=PYKI01002834.1:1..1726;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002834.1 Genbank gene 136 1726 . - . ID=gene-C9F07_28355;Name=parE;end_range=1726,.;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=C9F07_28355;partial=true PYKI01002834.1 Protein Homology CDS 136 1726 . - 1 ID=cds-TGD45582.1;Parent=gene-C9F07_28355;Dbxref=NCBI_GP:TGD45582.1;Name=TGD45582.1;end_range=1726,.;gbkey=CDS;gene=parE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457573.1;locus_tag=C9F07_28355;partial=true;product=DNA topoisomerase IV subunit B;protein_id=TGD45582.1;transl_table=11 ##sequence-region PYKI01000491.1 1 1725 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000491.1 Genbank region 1 1725 . + . ID=PYKI01000491.1:1..1725;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000491.1 Genbank gene 1 1080 . - . ID=gene-C9F07_03960;Name=C9F07_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03960;partial=true;start_range=.,1 PYKI01000491.1 Protein Homology CDS 1 1080 . - 0 ID=cds-TGE17862.1;Parent=gene-C9F07_03960;Dbxref=NCBI_GP:TGE17862.1;Name=TGE17862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=C9F07_03960;partial=true;product=cysteine--tRNA ligase;protein_id=TGE17862.1;start_range=.,1;transl_table=11 PYKI01000491.1 Genbank gene 1253 1717 . + . ID=gene-C9F07_03965;Name=C9F07_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03965 PYKI01000491.1 Protein Homology CDS 1253 1717 . + 0 ID=cds-TGE17863.1;Parent=gene-C9F07_03965;Dbxref=NCBI_GP:TGE17863.1;Name=TGE17863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=C9F07_03965;product=peptidylprolyl isomerase;protein_id=TGE17863.1;transl_table=11 ##sequence-region PYKI01000958.1 1 1723 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000958.1 Genbank region 1 1723 . + . ID=PYKI01000958.1:1..1723;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000958.1 Genbank gene 1 880 . - . ID=gene-C9F07_08745;Name=C9F07_08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08745;partial=true;start_range=.,1 PYKI01000958.1 Protein Homology CDS 1 880 . - 0 ID=cds-TGE00922.1;Parent=gene-C9F07_08745;Dbxref=NCBI_GP:TGE00922.1;Name=TGE00922.1;Note=catalyzes the interconversion of D-xylose to D-xylulose;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=C9F07_08745;partial=true;product=xylose isomerase;protein_id=TGE00922.1;start_range=.,1;transl_table=11 PYKI01000958.1 Genbank gene 967 1167 . - . ID=gene-C9F07_08750;Name=C9F07_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08750 PYKI01000958.1 Protein Homology CDS 967 1167 . - 0 ID=cds-TGE00924.1;Parent=gene-C9F07_08750;Dbxref=NCBI_GP:TGE00924.1;Name=TGE00924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664696.1;locus_tag=C9F07_08750;product=hypothetical protein;protein_id=TGE00924.1;transl_table=11 PYKI01000958.1 Genbank gene 1243 1641 . + . ID=gene-C9F07_08755;Name=C9F07_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_08755 PYKI01000958.1 Protein Homology CDS 1243 1641 . + 0 ID=cds-TGE00923.1;Parent=gene-C9F07_08755;Dbxref=NCBI_GP:TGE00923.1;Name=TGE00923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494476.1;locus_tag=C9F07_08755;product=transcriptional regulator;protein_id=TGE00923.1;transl_table=11 ##sequence-region PYKI01002386.1 1 4508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002386.1 Genbank region 1 4508 . + . ID=PYKI01002386.1:1..4508;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002386.1 Genbank gene 1 1741 . + . ID=gene-C9F07_23465;Name=C9F07_23465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23465;partial=true;start_range=.,1 PYKI01002386.1 Protein Homology CDS 1 1741 . + 1 ID=cds-TGD52281.1;Parent=gene-C9F07_23465;Dbxref=NCBI_GP:TGD52281.1;Name=TGD52281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461625.1;locus_tag=C9F07_23465;partial=true;product=phage tail tape measure protein;protein_id=TGD52281.1;start_range=.,1;transl_table=11 PYKI01002386.1 Genbank gene 1738 2223 . + . ID=gene-C9F07_23470;Name=C9F07_23470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23470 PYKI01002386.1 Protein Homology CDS 1738 2223 . + 0 ID=cds-TGD52282.1;Parent=gene-C9F07_23470;Dbxref=NCBI_GP:TGD52282.1;Name=TGD52282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461624.1;locus_tag=C9F07_23470;product=phage tail protein;protein_id=TGD52282.1;transl_table=11 PYKI01002386.1 Genbank gene 2220 3320 . + . ID=gene-C9F07_23475;Name=C9F07_23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23475 PYKI01002386.1 Protein Homology CDS 2220 3320 . + 0 ID=cds-TGD52283.1;Parent=gene-C9F07_23475;Dbxref=NCBI_GP:TGD52283.1;Name=TGD52283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461623.1;locus_tag=C9F07_23475;product=late control protein D;protein_id=TGD52283.1;transl_table=11 PYKI01002386.1 Genbank gene 3389 3607 . + . ID=gene-C9F07_23480;Name=C9F07_23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23480 PYKI01002386.1 Protein Homology CDS 3389 3607 . + 0 ID=cds-TGD52284.1;Parent=gene-C9F07_23480;Dbxref=NCBI_GP:TGD52284.1;Name=TGD52284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461622.1;locus_tag=C9F07_23480;product=levansucrase regulator;protein_id=TGD52284.1;transl_table=11 PYKI01002386.1 Genbank gene 3725 4087 . - . ID=gene-C9F07_23485;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=C9F07_23485 PYKI01002386.1 cmsearch tmRNA 3725 4087 . - . ID=rna-C9F07_23485;Parent=gene-C9F07_23485;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00023,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_23485;product=transfer-messenger RNA PYKI01002386.1 cmsearch exon 3725 4087 . - . ID=exon-C9F07_23485-1;Parent=rna-C9F07_23485;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: nucleotide motif:Rfam:12.0:RF00023,COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C9F07_23485;product=transfer-messenger RNA PYKI01002386.1 Genbank gene 4159 4508 . - . ID=gene-C9F07_23490;Name=C9F07_23490;end_range=4508,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23490;partial=true PYKI01002386.1 Protein Homology CDS 4159 4508 . - 2 ID=cds-TGD52285.1;Parent=gene-C9F07_23490;Dbxref=NCBI_GP:TGD52285.1;Name=TGD52285.1;end_range=4508,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457161.1;locus_tag=C9F07_23490;partial=true;product=secretion protein HlyD;protein_id=TGD52285.1;transl_table=11 ##sequence-region PYKI01001056.1 1 1722 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001056.1 Genbank region 1 1722 . + . ID=PYKI01001056.1:1..1722;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001056.1 Genbank gene 4 498 . - . ID=gene-C9F07_09750;Name=C9F07_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09750 PYKI01001056.1 Protein Homology CDS 4 498 . - 0 ID=cds-TGD96355.1;Parent=gene-C9F07_09750;Dbxref=NCBI_GP:TGD96355.1;Name=TGD96355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459935.1;locus_tag=C9F07_09750;product=leucine-responsive transcriptional regulator Lrp;protein_id=TGD96355.1;transl_table=11 PYKI01001056.1 Genbank gene 427 702 . + . ID=gene-C9F07_09755;Name=C9F07_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_09755 PYKI01001056.1 Protein Homology CDS 427 702 . + 0 ID=cds-TGD96356.1;Parent=gene-C9F07_09755;Dbxref=NCBI_GP:TGD96356.1;Name=TGD96356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751915.1;locus_tag=C9F07_09755;product=hypothetical protein;protein_id=TGD96356.1;transl_table=11 PYKI01001056.1 Genbank pseudogene 1045 1665 . + . ID=gene-C9F07_09760;Name=C9F07_09760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_09760;pseudo=true PYKI01001056.1 Protein Homology CDS 1045 1665 . + 0 ID=cds-C9F07_09760;Parent=gene-C9F07_09760;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455446.1;locus_tag=C9F07_09760;product=thioredoxin-disulfide reductase;pseudo=true;transl_table=11 ##sequence-region PYKI01002187.1 1 1721 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002187.1 Genbank region 1 1721 . + . ID=PYKI01002187.1:1..1721;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002187.1 Genbank gene 1 465 . - . ID=gene-C9F07_21255;Name=C9F07_21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21255;partial=true;start_range=.,1 PYKI01002187.1 Protein Homology CDS 1 465 . - 0 ID=cds-TGD56625.1;Parent=gene-C9F07_21255;Dbxref=NCBI_GP:TGD56625.1;Name=TGD56625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460102.1;locus_tag=C9F07_21255;partial=true;product=N-acetylneuraminic acid mutarotase;protein_id=TGD56625.1;start_range=.,1;transl_table=11 PYKI01002187.1 Genbank gene 971 1651 . + . ID=gene-C9F07_21260;Name=C9F07_21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21260 PYKI01002187.1 Protein Homology CDS 971 1651 . + 0 ID=cds-TGD56624.1;Parent=gene-C9F07_21260;Dbxref=NCBI_GP:TGD56624.1;Name=TGD56624.1;Note=Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455624.1;locus_tag=C9F07_21260;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=TGD56624.1;transl_table=11 ##sequence-region PYKI01003591.1 1 1721 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003591.1 Genbank region 1 1721 . + . ID=PYKI01003591.1:1..1721;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003591.1 Genbank gene 186 1628 . - . ID=gene-C9F07_36215;Name=C9F07_36215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36215 PYKI01003591.1 Protein Homology CDS 186 1628 . - 0 ID=cds-TGD29826.1;Parent=gene-C9F07_36215;Dbxref=NCBI_GP:TGD29826.1;Name=TGD29826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456653.1;locus_tag=C9F07_36215;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=TGD29826.1;transl_table=11 PYKI01003591.1 Genbank gene 1625 1721 . - . ID=gene-C9F07_36220;Name=C9F07_36220;end_range=1721,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36220;partial=true PYKI01003591.1 Protein Homology CDS 1625 1721 . - 1 ID=cds-TGD29827.1;Parent=gene-C9F07_36220;Dbxref=NCBI_GP:TGD29827.1;Name=TGD29827.1;end_range=1721,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456654.1;locus_tag=C9F07_36220;partial=true;product=colanic acid biosynthesis glycosyl transferase;protein_id=TGD29827.1;transl_table=11 ##sequence-region PYKI01003342.1 1 1719 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003342.1 Genbank region 1 1719 . + . ID=PYKI01003342.1:1..1719;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003342.1 Genbank gene 64 139 . + . ID=gene-C9F07_33620;Name=C9F07_33620;gbkey=Gene;gene_biotype=tRNA;locus_tag=C9F07_33620 PYKI01003342.1 tRNAscan-SE tRNA 64 139 . + . ID=rna-C9F07_33620;Parent=gene-C9F07_33620;anticodon=(pos:97..99);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_33620;product=tRNA-Trp PYKI01003342.1 tRNAscan-SE exon 64 139 . + . ID=exon-C9F07_33620-1;Parent=rna-C9F07_33620;anticodon=(pos:97..99);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C9F07_33620;product=tRNA-Trp PYKI01003342.1 Genbank gene 241 1089 . - . ID=gene-C9F07_33625;Name=C9F07_33625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33625 PYKI01003342.1 Protein Homology CDS 241 1089 . - 0 ID=cds-TGD35066.1;Parent=gene-C9F07_33625;Dbxref=NCBI_GP:TGD35066.1;Name=TGD35066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=C9F07_33625;product=HTH-type transcriptional regulator HdfR;protein_id=TGD35066.1;transl_table=11 PYKI01003342.1 Genbank gene 1196 1534 . + . ID=gene-C9F07_33630;Name=C9F07_33630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33630 PYKI01003342.1 Protein Homology CDS 1196 1534 . + 0 ID=cds-TGD35067.1;Parent=gene-C9F07_33630;Dbxref=NCBI_GP:TGD35067.1;Name=TGD35067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457896.1;locus_tag=C9F07_33630;product=DUF413 domain-containing protein;protein_id=TGD35067.1;transl_table=11 PYKI01003342.1 Genbank gene 1559 1719 . - . ID=gene-C9F07_33635;Name=C9F07_33635;end_range=1719,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_33635;partial=true PYKI01003342.1 Protein Homology CDS 1559 1719 . - 2 ID=cds-TGD35068.1;Parent=gene-C9F07_33635;Dbxref=NCBI_GP:TGD35068.1;Name=TGD35068.1;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;end_range=1719,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=C9F07_33635;partial=true;product=ATP-dependent protease;protein_id=TGD35068.1;transl_table=11 ##sequence-region PYKI01000262.1 1 1718 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000262.1 Genbank region 1 1718 . + . ID=PYKI01000262.1:1..1718;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000262.1 Genbank gene 1 537 . - . ID=gene-C9F07_01700;Name=C9F07_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01700;partial=true;start_range=.,1 PYKI01000262.1 Protein Homology CDS 1 537 . - 0 ID=cds-TGE27846.1;Parent=gene-C9F07_01700;Dbxref=NCBI_GP:TGE27846.1;Name=TGE27846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457594.1;locus_tag=C9F07_01700;partial=true;product=hypothetical protein;protein_id=TGE27846.1;start_range=.,1;transl_table=11 PYKI01000262.1 Genbank gene 636 761 . + . ID=gene-C9F07_01705;Name=C9F07_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01705 PYKI01000262.1 Protein Homology CDS 636 761 . + 0 ID=cds-TGE27849.1;Parent=gene-C9F07_01705;Dbxref=NCBI_GP:TGE27849.1;Name=TGE27849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296427.1;locus_tag=C9F07_01705;product=hypothetical protein;protein_id=TGE27849.1;transl_table=11 PYKI01000262.1 Genbank gene 779 1366 . + . ID=gene-C9F07_01710;Name=C9F07_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01710 PYKI01000262.1 Protein Homology CDS 779 1366 . + 0 ID=cds-TGE27847.1;Parent=gene-C9F07_01710;Dbxref=NCBI_GP:TGE27847.1;Name=TGE27847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001638967.1;locus_tag=C9F07_01710;product=inorganic triphosphatase;protein_id=TGE27847.1;transl_table=11 PYKI01000262.1 Genbank gene 1460 1718 . + . ID=gene-C9F07_01715;Name=C9F07_01715;end_range=1718,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01715;partial=true PYKI01000262.1 GeneMarkS+ CDS 1460 1718 . + 0 ID=cds-TGE27848.1;Parent=gene-C9F07_01715;Dbxref=NCBI_GP:TGE27848.1;Name=TGE27848.1;end_range=1718,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F07_01715;partial=true;product=inorganic triphosphatase;protein_id=TGE27848.1;transl_table=11 ##sequence-region PYKI01000347.1 1 1717 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000347.1 Genbank region 1 1717 . + . ID=PYKI01000347.1:1..1717;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000347.1 Genbank gene 151 1542 . - . ID=gene-C9F07_02580;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=C9F07_02580 PYKI01000347.1 Protein Homology CDS 151 1542 . - 0 ID=cds-TGE26825.1;Parent=gene-C9F07_02580;Dbxref=NCBI_GP:TGE26825.1;Name=TGE26825.1;gbkey=CDS;gene=pgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=C9F07_02580;product=phosphoglycerate transporter PgtP;protein_id=TGE26825.1;transl_table=11 ##sequence-region PYKI01000476.1 1 1717 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000476.1 Genbank region 1 1717 . + . ID=PYKI01000476.1:1..1717;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000476.1 Genbank gene 1 92 . - . ID=gene-C9F07_03795;Name=C9F07_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03795;partial=true;start_range=.,1 PYKI01000476.1 Protein Homology CDS 1 92 . - 0 ID=cds-TGE19227.1;Parent=gene-C9F07_03795;Dbxref=NCBI_GP:TGE19227.1;Name=TGE19227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455878.1;locus_tag=C9F07_03795;partial=true;product=aminoglycoside 6'-acetyltransferase;protein_id=TGE19227.1;start_range=.,1;transl_table=11 PYKI01000476.1 Genbank gene 92 883 . - . ID=gene-C9F07_03800;Name=C9F07_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03800 PYKI01000476.1 Protein Homology CDS 92 883 . - 0 ID=cds-TGE19229.1;Parent=gene-C9F07_03800;Dbxref=NCBI_GP:TGE19229.1;Name=TGE19229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455879.1;locus_tag=C9F07_03800;product=DeoR/GlpR transcriptional regulator;protein_id=TGE19229.1;transl_table=11 PYKI01000476.1 Genbank gene 899 1531 . - . ID=gene-C9F07_03805;Name=C9F07_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03805 PYKI01000476.1 Protein Homology CDS 899 1531 . - 0 ID=cds-TGE19228.1;Parent=gene-C9F07_03805;Dbxref=NCBI_GP:TGE19228.1;Name=TGE19228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455880.1;locus_tag=C9F07_03805;product=epimerase;protein_id=TGE19228.1;transl_table=11 PYKI01000476.1 Genbank pseudogene 1543 1641 . - . ID=gene-C9F07_03810;Name=C9F07_03810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03810;pseudo=true PYKI01000476.1 Protein Homology CDS 1543 1641 . - 0 ID=cds-C9F07_03810;Parent=gene-C9F07_03810;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455881.1;locus_tag=C9F07_03810;product=PTS sugar transporter subunit IIA;pseudo=true;transl_table=11 ##sequence-region PYKI01003264.1 1 1710 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003264.1 Genbank region 1 1710 . + . ID=PYKI01003264.1:1..1710;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003264.1 Genbank gene 45 1710 . + . ID=gene-C9F07_32825;Name=C9F07_32825;end_range=1710,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32825;partial=true PYKI01003264.1 Protein Homology CDS 45 1710 . + 0 ID=cds-TGD36230.1;Parent=gene-C9F07_32825;Dbxref=NCBI_GP:TGD36230.1;Name=TGD36230.1;end_range=1710,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455762.1;locus_tag=C9F07_32825;partial=true;product=guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase;protein_id=TGD36230.1;transl_table=11 ##sequence-region PYKI01003407.1 1 1709 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003407.1 Genbank region 1 1709 . + . ID=PYKI01003407.1:1..1709;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003407.1 Genbank pseudogene 61 666 . + . ID=gene-C9F07_34245;Name=C9F07_34245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34245;pseudo=true PYKI01003407.1 Protein Homology CDS 61 666 . + 0 ID=cds-C9F07_34245;Parent=gene-C9F07_34245;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457123.1;locus_tag=C9F07_34245;product=tRNA/rRNA methyltransferase;pseudo=true;transl_table=11 PYKI01003407.1 Genbank gene 782 1471 . - . ID=gene-C9F07_34250;Name=C9F07_34250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34250 PYKI01003407.1 Protein Homology CDS 782 1471 . - 0 ID=cds-TGD33897.1;Parent=gene-C9F07_34250;Dbxref=NCBI_GP:TGD33897.1;Name=TGD33897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457122.1;locus_tag=C9F07_34250;product=uracil-DNA glycosylase;protein_id=TGD33897.1;transl_table=11 ##sequence-region PYKI01002176.1 1 4507 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002176.1 Genbank region 1 4507 . + . ID=PYKI01002176.1:1..4507;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002176.1 Genbank pseudogene 64 402 . - . ID=gene-C9F07_21125;Name=C9F07_21125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_21125;pseudo=true PYKI01002176.1 Protein Homology CDS 64 402 . - 0 ID=cds-C9F07_21125;Parent=gene-C9F07_21125;Note=Salmonella pathogenicity island 2 protein%3B member of a type III secretion system involved in the survival and replication of Salmonella in a host cell%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456133.1;locus_tag=C9F07_21125;product=EscD/YscD/HrpQ family type III secretion system inner membrane ring protein;pseudo=true;transl_table=11 PYKI01002176.1 Genbank gene 383 1876 . - . ID=gene-C9F07_21130;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=C9F07_21130 PYKI01002176.1 Protein Homology CDS 383 1876 . - 0 ID=cds-TGD56982.1;Parent=gene-C9F07_21130;Dbxref=NCBI_GP:TGD56982.1;Name=TGD56982.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456134.1;locus_tag=C9F07_21130;product=SPI-2 type III secretion system protein SpiA;protein_id=TGD56982.1;transl_table=11 PYKI01002176.1 Genbank gene 1878 2279 . - . ID=gene-C9F07_21135;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=C9F07_21135 PYKI01002176.1 Protein Homology CDS 1878 2279 . - 0 ID=cds-TGD56983.1;Parent=gene-C9F07_21135;Dbxref=NCBI_GP:TGD56983.1;Name=TGD56983.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=C9F07_21135;product=SPI-2 type III secretion system protein SpiC;protein_id=TGD56983.1;transl_table=11 PYKI01002176.1 Genbank gene 2680 4507 . + . ID=gene-C9F07_21140;Name=C9F07_21140;end_range=4507,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21140;partial=true PYKI01002176.1 Protein Homology CDS 2680 4507 . + 0 ID=cds-TGD56984.1;Parent=gene-C9F07_21140;Dbxref=NCBI_GP:TGD56984.1;Name=TGD56984.1;Note=phosphorylates the response regulator SsrB%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2;end_range=4507,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=C9F07_21140;partial=true;product=hybrid sensor histidine kinase/response regulator;protein_id=TGD56984.1;transl_table=11 ##sequence-region PYKI01002005.1 1 1704 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002005.1 Genbank region 1 1704 . + . ID=PYKI01002005.1:1..1704;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002005.1 Genbank gene 25 1254 . - . ID=gene-C9F07_19335;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=C9F07_19335 PYKI01002005.1 Protein Homology CDS 25 1254 . - 0 ID=cds-TGD60134.1;Parent=gene-C9F07_19335;Dbxref=NCBI_GP:TGD60134.1;Name=TGD60134.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=C9F07_19335;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=TGD60134.1;transl_table=11 PYKI01002005.1 Genbank pseudogene 1282 1641 . - . ID=gene-C9F07_19340;Name=C9F07_19340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_19340;pseudo=true PYKI01002005.1 Protein Homology CDS 1282 1641 . - 0 ID=cds-C9F07_19340;Parent=gene-C9F07_19340;Note=cell invasion protein B%3B required for entry of the bacteria into the host cell%3B induces apoptosis in macrophages%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457279.1;locus_tag=C9F07_19340;product=pathogenicity island 1 effector protein SipB;pseudo=true;transl_table=11 ##sequence-region PYKI01001910.1 1 1698 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001910.1 Genbank region 1 1698 . + . ID=PYKI01001910.1:1..1698;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001910.1 Genbank pseudogene 38 403 . + . ID=gene-C9F07_18390;Name=C9F07_18390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_18390;pseudo=true PYKI01001910.1 Protein Homology CDS 38 403 . + 0 ID=cds-C9F07_18390;Parent=gene-C9F07_18390;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666973.1;locus_tag=C9F07_18390;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01001910.1 Genbank gene 499 1056 . + . ID=gene-C9F07_18395;Name=C9F07_18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18395 PYKI01001910.1 Protein Homology CDS 499 1056 . + 0 ID=cds-TGD61292.1;Parent=gene-C9F07_18395;Dbxref=NCBI_GP:TGD61292.1;Name=TGD61292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=C9F07_18395;product=peroxiredoxin;protein_id=TGD61292.1;transl_table=11 PYKI01001910.1 Genbank gene 1163 1501 . - . ID=gene-C9F07_18400;Name=C9F07_18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18400 PYKI01001910.1 Protein Homology CDS 1163 1501 . - 0 ID=cds-TGD61293.1;Parent=gene-C9F07_18400;Dbxref=NCBI_GP:TGD61293.1;Name=TGD61293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455838.1;locus_tag=C9F07_18400;product=hypothetical protein;protein_id=TGD61293.1;transl_table=11 ##sequence-region PYKI01003093.1 1 1697 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003093.1 Genbank region 1 1697 . + . ID=PYKI01003093.1:1..1697;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003093.1 Genbank gene 146 1697 . + . ID=gene-C9F07_30945;Name=C9F07_30945;end_range=1697,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=C9F07_30945;partial=true PYKI01003093.1 Genbank rRNA 146 1697 . + . ID=rna-C9F07_30945;Parent=gene-C9F07_30945;end_range=1697,.;gbkey=rRNA;locus_tag=C9F07_30945;partial=true;product=16S ribosomal RNA PYKI01003093.1 Genbank exon 146 1697 . + . ID=exon-C9F07_30945-1;Parent=rna-C9F07_30945;end_range=1697,.;gbkey=rRNA;locus_tag=C9F07_30945;partial=true;product=16S ribosomal RNA ##sequence-region PYKI01003532.1 1 1694 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003532.1 Genbank region 1 1694 . + . ID=PYKI01003532.1:1..1694;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003532.1 Genbank gene 250 1179 . - . ID=gene-C9F07_35670;Name=C9F07_35670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35670 PYKI01003532.1 Protein Homology CDS 250 1179 . - 0 ID=cds-TGD31212.1;Parent=gene-C9F07_35670;Dbxref=NCBI_GP:TGD31212.1;Name=TGD31212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=C9F07_35670;product=L%2CD-transpeptidase;protein_id=TGD31212.1;transl_table=11 PYKI01003532.1 Genbank gene 1257 1694 . - . ID=gene-C9F07_35675;Name=cobT;end_range=1694,.;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=C9F07_35675;partial=true PYKI01003532.1 Protein Homology CDS 1257 1694 . - 0 ID=cds-TGD31213.1;Parent=gene-C9F07_35675;Dbxref=NCBI_GP:TGD31213.1;Name=TGD31213.1;Note=catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5%2C6-dimethylbenzimidazole;end_range=1694,.;gbkey=CDS;gene=cobT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456570.1;locus_tag=C9F07_35675;partial=true;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=TGD31213.1;transl_table=11 ##sequence-region PYKI01000528.1 1 1693 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000528.1 Genbank region 1 1693 . + . ID=PYKI01000528.1:1..1693;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000528.1 Genbank gene 1 532 . - . ID=gene-C9F07_04380;Name=C9F07_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04380;partial=true;start_range=.,1 PYKI01000528.1 Protein Homology CDS 1 532 . - 0 ID=cds-TGE16082.1;Parent=gene-C9F07_04380;Dbxref=NCBI_GP:TGE16082.1;Name=TGE16082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=C9F07_04380;partial=true;product=D-hexose-6-phosphate mutarotase;protein_id=TGE16082.1;start_range=.,1;transl_table=11 PYKI01000528.1 Genbank gene 532 708 . - . ID=gene-C9F07_04385;Name=C9F07_04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04385 PYKI01000528.1 Protein Homology CDS 532 708 . - 0 ID=cds-TGE16083.1;Parent=gene-C9F07_04385;Dbxref=NCBI_GP:TGE16083.1;Name=TGE16083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991986.1;locus_tag=C9F07_04385;product=hypothetical protein;protein_id=TGE16083.1;transl_table=11 PYKI01000528.1 Genbank gene 861 1693 . - . ID=gene-C9F07_04390;Name=C9F07_04390;end_range=1693,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04390;partial=true PYKI01000528.1 Protein Homology CDS 861 1693 . - 2 ID=cds-TGE16084.1;Parent=gene-C9F07_04390;Dbxref=NCBI_GP:TGE16084.1;Name=TGE16084.1;end_range=1693,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456222.1;locus_tag=C9F07_04390;partial=true;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=TGE16084.1;transl_table=11 ##sequence-region PYKI01000441.1 1 1693 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000441.1 Genbank region 1 1693 . + . ID=PYKI01000441.1:1..1693;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000441.1 Genbank gene 12 398 . + . ID=gene-C9F07_03390;Name=C9F07_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03390 PYKI01000441.1 Protein Homology CDS 12 398 . + 0 ID=cds-TGE20822.1;Parent=gene-C9F07_03390;Dbxref=NCBI_GP:TGE20822.1;Name=TGE20822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455927.1;locus_tag=C9F07_03390;product=OsmC family peroxiredoxin;protein_id=TGE20822.1;transl_table=11 PYKI01000441.1 Genbank gene 518 1429 . - . ID=gene-C9F07_03395;Name=C9F07_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03395 PYKI01000441.1 Protein Homology CDS 518 1429 . - 0 ID=cds-TGE20821.1;Parent=gene-C9F07_03395;Dbxref=NCBI_GP:TGE20821.1;Name=TGE20821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415700.4;locus_tag=C9F07_03395;product=hemolysin HlyE;protein_id=TGE20821.1;transl_table=11 ##sequence-region PYKI01001503.1 1 1693 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001503.1 Genbank region 1 1693 . + . ID=PYKI01001503.1:1..1693;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001503.1 Genbank gene 1 483 . + . ID=gene-C9F07_14305;Name=C9F07_14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14305;partial=true;start_range=.,1 PYKI01001503.1 Protein Homology CDS 1 483 . + 0 ID=cds-TGD78058.1;Parent=gene-C9F07_14305;Dbxref=NCBI_GP:TGD78058.1;Name=TGD78058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458097.1;locus_tag=C9F07_14305;partial=true;product=phosphopantetheinyl transferase;protein_id=TGD78058.1;start_range=.,1;transl_table=11 PYKI01001503.1 Genbank gene 500 1066 . + . ID=gene-C9F07_14310;Name=C9F07_14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14310 PYKI01001503.1 Protein Homology CDS 500 1066 . + 0 ID=cds-TGD78059.1;Parent=gene-C9F07_14310;Dbxref=NCBI_GP:TGD78059.1;Name=TGD78059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000005228.1;locus_tag=C9F07_14310;product=NAD(P)H-dependent oxidoreductase;protein_id=TGD78059.1;transl_table=11 PYKI01001503.1 Genbank gene 1111 1693 . - . ID=gene-C9F07_14315;Name=C9F07_14315;end_range=1693,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14315;partial=true PYKI01001503.1 Protein Homology CDS 1111 1693 . - 1 ID=cds-TGD78060.1;Parent=gene-C9F07_14315;Dbxref=NCBI_GP:TGD78060.1;Name=TGD78060.1;end_range=1693,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458095.3;locus_tag=C9F07_14315;partial=true;product=hypothetical protein;protein_id=TGD78060.1;transl_table=11 ##sequence-region PYKI01003077.1 1 1692 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003077.1 Genbank region 1 1692 . + . ID=PYKI01003077.1:1..1692;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003077.1 Genbank gene 1 168 . - . ID=gene-C9F07_30835;Name=C9F07_30835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30835;partial=true;start_range=.,1 PYKI01003077.1 Protein Homology CDS 1 168 . - 0 ID=cds-TGD40431.1;Parent=gene-C9F07_30835;Dbxref=NCBI_GP:TGD40431.1;Name=TGD40431.1;Note=regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310564.1;locus_tag=C9F07_30835;partial=true;product=DNA-binding transcriptional regulator KdgR;protein_id=TGD40431.1;start_range=.,1;transl_table=11 PYKI01003077.1 Genbank gene 344 1692 . + . ID=gene-C9F07_30840;Name=C9F07_30840;end_range=1692,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_30840;partial=true PYKI01003077.1 Protein Homology CDS 344 1692 . + 0 ID=cds-TGD40432.1;Parent=gene-C9F07_30840;Dbxref=NCBI_GP:TGD40432.1;Name=TGD40432.1;end_range=1692,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=C9F07_30840;partial=true;product=MFS transporter;protein_id=TGD40432.1;transl_table=11 ##sequence-region PYKI01002710.1 1 1690 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002710.1 Genbank region 1 1690 . + . ID=PYKI01002710.1:1..1690;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002710.1 Genbank pseudogene 1 1288 . + . ID=gene-C9F07_27025;Name=C9F07_27025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_27025;pseudo=true PYKI01002710.1 Protein Homology CDS 1 1288 . + 1 ID=cds-C9F07_27025;Parent=gene-C9F07_27025;Note=catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate%3B internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=C9F07_27025;product=6-phospho-beta-glucosidase;pseudo=true;transl_table=11 PYKI01002710.1 Genbank gene 1301 1690 . + . ID=gene-C9F07_27030;Name=C9F07_27030;end_range=1690,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_27030;partial=true PYKI01002710.1 Protein Homology CDS 1301 1690 . + 0 ID=cds-TGD47876.1;Parent=gene-C9F07_27030;Dbxref=NCBI_GP:TGD47876.1;Name=TGD47876.1;end_range=1690,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456195.1;locus_tag=C9F07_27030;partial=true;product=chitin disaccharide deacetylase;protein_id=TGD47876.1;transl_table=11 ##sequence-region PYKI01003213.1 1 4504 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003213.1 Genbank region 1 4504 . + . ID=PYKI01003213.1:1..4504;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003213.1 Genbank gene 1 390 . - . ID=gene-C9F07_32305;Name=C9F07_32305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32305;partial=true;start_range=.,1 PYKI01003213.1 Protein Homology CDS 1 390 . - 0 ID=cds-TGD36932.1;Parent=gene-C9F07_32305;Dbxref=NCBI_GP:TGD36932.1;Name=TGD36932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=C9F07_32305;partial=true;product=50S ribosomal protein L16;protein_id=TGD36932.1;start_range=.,1;transl_table=11 PYKI01003213.1 Genbank gene 403 1104 . - . ID=gene-C9F07_32310;Name=C9F07_32310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32310 PYKI01003213.1 Protein Homology CDS 403 1104 . - 0 ID=cds-TGD36933.1;Parent=gene-C9F07_32310;Dbxref=NCBI_GP:TGD36933.1;Name=TGD36933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529946.1;locus_tag=C9F07_32310;product=30S ribosomal protein S3;protein_id=TGD36933.1;transl_table=11 PYKI01003213.1 Genbank gene 1122 1454 . - . ID=gene-C9F07_32315;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=C9F07_32315 PYKI01003213.1 Protein Homology CDS 1122 1454 . - 0 ID=cds-TGD36934.1;Parent=gene-C9F07_32315;Dbxref=NCBI_GP:TGD36934.1;Name=TGD36934.1;gbkey=CDS;gene=rplV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=C9F07_32315;product=50S ribosomal protein L22;protein_id=TGD36934.1;transl_table=11 PYKI01003213.1 Genbank gene 1469 1747 . - . ID=gene-C9F07_32320;Name=C9F07_32320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32320 PYKI01003213.1 Protein Homology CDS 1469 1747 . - 0 ID=cds-TGD36935.1;Parent=gene-C9F07_32320;Dbxref=NCBI_GP:TGD36935.1;Name=TGD36935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=C9F07_32320;product=30S ribosomal protein S19;protein_id=TGD36935.1;transl_table=11 PYKI01003213.1 Genbank gene 1764 2585 . - . ID=gene-C9F07_32325;Name=C9F07_32325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32325 PYKI01003213.1 Protein Homology CDS 1764 2585 . - 0 ID=cds-TGD36936.1;Parent=gene-C9F07_32325;Dbxref=NCBI_GP:TGD36936.1;Name=TGD36936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=C9F07_32325;product=50S ribosomal protein L2;protein_id=TGD36936.1;transl_table=11 PYKI01003213.1 Genbank gene 2603 2905 . - . ID=gene-C9F07_32330;Name=C9F07_32330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32330 PYKI01003213.1 Protein Homology CDS 2603 2905 . - 0 ID=cds-TGD36937.1;Parent=gene-C9F07_32330;Dbxref=NCBI_GP:TGD36937.1;Name=TGD36937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=C9F07_32330;product=50S ribosomal protein L23;protein_id=TGD36937.1;transl_table=11 PYKI01003213.1 Genbank gene 2902 3507 . - . ID=gene-C9F07_32335;Name=C9F07_32335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32335 PYKI01003213.1 Protein Homology CDS 2902 3507 . - 0 ID=cds-TGD36938.1;Parent=gene-C9F07_32335;Dbxref=NCBI_GP:TGD36938.1;Name=TGD36938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=C9F07_32335;product=50S ribosomal protein L4;protein_id=TGD36938.1;transl_table=11 PYKI01003213.1 Genbank gene 3518 4147 . - . ID=gene-C9F07_32340;Name=C9F07_32340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32340 PYKI01003213.1 Protein Homology CDS 3518 4147 . - 0 ID=cds-TGD36939.1;Parent=gene-C9F07_32340;Dbxref=NCBI_GP:TGD36939.1;Name=TGD36939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=C9F07_32340;product=50S ribosomal protein L3;protein_id=TGD36939.1;transl_table=11 PYKI01003213.1 Genbank gene 4180 4491 . - . ID=gene-C9F07_32345;Name=C9F07_32345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_32345 PYKI01003213.1 Protein Homology CDS 4180 4491 . - 0 ID=cds-TGD36940.1;Parent=gene-C9F07_32345;Dbxref=NCBI_GP:TGD36940.1;Name=TGD36940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458459.1;locus_tag=C9F07_32345;product=30S ribosomal protein S10;protein_id=TGD36940.1;transl_table=11 ##sequence-region PYKI01002884.1 1 1683 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002884.1 Genbank region 1 1683 . + . ID=PYKI01002884.1:1..1683;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002884.1 Genbank gene 326 1162 . - . ID=gene-C9F07_28875;Name=C9F07_28875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28875 PYKI01002884.1 Protein Homology CDS 326 1162 . - 0 ID=cds-TGD44047.1;Parent=gene-C9F07_28875;Dbxref=NCBI_GP:TGD44047.1;Name=TGD44047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=C9F07_28875;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=TGD44047.1;transl_table=11 PYKI01002884.1 Genbank gene 1357 1683 . + . ID=gene-C9F07_28880;Name=C9F07_28880;end_range=1683,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28880;partial=true PYKI01002884.1 Protein Homology CDS 1357 1683 . + 0 ID=cds-TGD44048.1;Parent=gene-C9F07_28880;Dbxref=NCBI_GP:TGD44048.1;Name=TGD44048.1;end_range=1683,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458715.1;locus_tag=C9F07_28880;partial=true;product=formate dehydrogenase;protein_id=TGD44048.1;transl_table=11 ##sequence-region PYKI01002549.1 1 1683 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002549.1 Genbank region 1 1683 . + . ID=PYKI01002549.1:1..1683;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002549.1 Genbank gene 1 319 . + . ID=gene-C9F07_25300;Name=C9F07_25300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25300;partial=true;start_range=.,1 PYKI01002549.1 Protein Homology CDS 1 319 . + 1 ID=cds-TGD49932.1;Parent=gene-C9F07_25300;Dbxref=NCBI_GP:TGD49932.1;Name=TGD49932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455906.1;locus_tag=C9F07_25300;partial=true;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=TGD49932.1;start_range=.,1;transl_table=11 PYKI01002549.1 Genbank gene 319 768 . + . ID=gene-C9F07_25305;Name=C9F07_25305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25305 PYKI01002549.1 Protein Homology CDS 319 768 . + 0 ID=cds-TGD49933.1;Parent=gene-C9F07_25305;Dbxref=NCBI_GP:TGD49933.1;Name=TGD49933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455905.1;locus_tag=C9F07_25305;product=hypothetical protein;protein_id=TGD49933.1;transl_table=11 PYKI01002549.1 Genbank gene 773 1006 . - . ID=gene-C9F07_25310;Name=C9F07_25310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25310 PYKI01002549.1 Protein Homology CDS 773 1006 . - 0 ID=cds-TGD49934.1;Parent=gene-C9F07_25310;Dbxref=NCBI_GP:TGD49934.1;Name=TGD49934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=C9F07_25310;product=DUF2526 domain-containing protein;protein_id=TGD49934.1;transl_table=11 PYKI01002549.1 Genbank pseudogene 1230 1622 . + . ID=gene-C9F07_25315;Name=C9F07_25315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_25315;pseudo=true PYKI01002549.1 Protein Homology CDS 1230 1622 . + 0 ID=cds-C9F07_25315;Parent=gene-C9F07_25315;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=C9F07_25315;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01003478.1 1 1683 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003478.1 Genbank region 1 1683 . + . ID=PYKI01003478.1:1..1683;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003478.1 Genbank gene 1 1043 . - . ID=gene-C9F07_35005;Name=C9F07_35005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35005;partial=true;start_range=.,1 PYKI01003478.1 Protein Homology CDS 1 1043 . - 0 ID=cds-TGD32511.1;Parent=gene-C9F07_35005;Dbxref=NCBI_GP:TGD32511.1;Name=TGD32511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459914.1;locus_tag=C9F07_35005;partial=true;product=hydroxylamine reductase;protein_id=TGD32511.1;start_range=.,1;transl_table=11 PYKI01003478.1 Genbank gene 1007 1210 . + . ID=gene-C9F07_35010;Name=C9F07_35010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_35010 PYKI01003478.1 Protein Homology CDS 1007 1210 . + 0 ID=cds-TGD32510.1;Parent=gene-C9F07_35010;Dbxref=NCBI_GP:TGD32510.1;Name=TGD32510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528857.1;locus_tag=C9F07_35010;product=hypothetical protein;protein_id=TGD32510.1;transl_table=11 PYKI01003478.1 Genbank pseudogene 1187 1627 . - . ID=gene-C9F07_35015;Name=C9F07_35015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_35015;pseudo=true PYKI01003478.1 Protein Homology CDS 1187 1627 . - 0 ID=cds-C9F07_35015;Parent=gene-C9F07_35015;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=C9F07_35015;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01000546.1 1 1682 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000546.1 Genbank region 1 1682 . + . ID=PYKI01000546.1:1..1682;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000546.1 Genbank gene 1 460 . + . ID=gene-C9F07_04530;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=C9F07_04530;partial=true;start_range=.,1 PYKI01000546.1 Protein Homology CDS 1 460 . + 1 ID=cds-TGE15360.1;Parent=gene-C9F07_04530;Dbxref=NCBI_GP:TGE15360.1;Name=TGE15360.1;gbkey=CDS;gene=rsmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=C9F07_04530;partial=true;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=TGE15360.1;start_range=.,1;transl_table=11 PYKI01000546.1 Genbank gene 575 814 . + . ID=gene-C9F07_04535;Name=C9F07_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04535 PYKI01000546.1 Protein Homology CDS 575 814 . + 0 ID=cds-TGE15361.1;Parent=gene-C9F07_04535;Dbxref=NCBI_GP:TGE15361.1;Name=TGE15361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456356.1;locus_tag=C9F07_04535;product=DUF1480 domain-containing protein;protein_id=TGE15361.1;transl_table=11 PYKI01000546.1 Genbank gene 925 1116 . + . ID=gene-C9F07_04540;Name=C9F07_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04540 PYKI01000546.1 Protein Homology CDS 925 1116 . + 0 ID=cds-TGE15362.1;Parent=gene-C9F07_04540;Dbxref=NCBI_GP:TGE15362.1;Name=TGE15362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456357.1;locus_tag=C9F07_04540;product=DUF1482 domain-containing protein;protein_id=TGE15362.1;transl_table=11 PYKI01000546.1 Genbank gene 1135 1682 . - . ID=gene-C9F07_04545;Name=C9F07_04545;end_range=1682,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_04545;partial=true PYKI01000546.1 Protein Homology CDS 1135 1682 . - 2 ID=cds-TGE15363.1;Parent=gene-C9F07_04545;Dbxref=NCBI_GP:TGE15363.1;Name=TGE15363.1;end_range=1682,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=C9F07_04545;partial=true;product=protein-serine/threonine phosphatase;protein_id=TGE15363.1;transl_table=11 ##sequence-region PYKI01001353.1 1 1679 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001353.1 Genbank region 1 1679 . + . ID=PYKI01001353.1:1..1679;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001353.1 Genbank gene 381 647 . + . ID=gene-C9F07_12705;Name=C9F07_12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12705 PYKI01001353.1 Protein Homology CDS 381 647 . + 0 ID=cds-TGD85088.1;Parent=gene-C9F07_12705;Dbxref=NCBI_GP:TGD85088.1;Name=TGD85088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454978.1;locus_tag=C9F07_12705;product=anti-adapter protein IraP;protein_id=TGD85088.1;transl_table=11 PYKI01001353.1 Genbank gene 654 833 . - . ID=gene-C9F07_12710;Name=C9F07_12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12710 PYKI01001353.1 Protein Homology CDS 654 833 . - 0 ID=cds-TGD85089.1;Parent=gene-C9F07_12710;Dbxref=NCBI_GP:TGD85089.1;Name=TGD85089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527537.1;locus_tag=C9F07_12710;product=hypothetical protein;protein_id=TGD85089.1;transl_table=11 PYKI01001353.1 Genbank gene 1000 1320 . + . ID=gene-C9F07_12715;Name=C9F07_12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12715 PYKI01001353.1 Protein Homology CDS 1000 1320 . + 0 ID=cds-TGD85090.1;Parent=gene-C9F07_12715;Dbxref=NCBI_GP:TGD85090.1;Name=TGD85090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454979.1;locus_tag=C9F07_12715;product=phosphate starvation-inducible protein PsiF;protein_id=TGD85090.1;transl_table=11 PYKI01001353.1 Genbank gene 1412 1679 . + . ID=gene-C9F07_12720;Name=adrA;end_range=1679,.;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=yaiC;locus_tag=C9F07_12720;partial=true PYKI01001353.1 Protein Homology CDS 1412 1679 . + 0 ID=cds-TGD85091.1;Parent=gene-C9F07_12720;Dbxref=NCBI_GP:TGD85091.1;Name=TGD85091.1;Note=catalyzes the conversion of 2 GTP into c-di-GMP%3B adrA overexpression induces cellulose biosynthesis%2C cell adherence to abiotic surfaces and swimming and swarming motility%3B AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynthesis;end_range=1679,.;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=C9F07_12720;partial=true;product=diguanylate cyclase AdrA;protein_id=TGD85091.1;transl_table=11 ##sequence-region PYKI01001449.1 1 1679 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001449.1 Genbank region 1 1679 . + . ID=PYKI01001449.1:1..1679;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001449.1 Genbank gene 31 1679 . - . ID=gene-C9F07_13725;Name=C9F07_13725;end_range=1679,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13725;partial=true PYKI01001449.1 Protein Homology CDS 31 1679 . - 2 ID=cds-TGD83674.1;Parent=gene-C9F07_13725;Dbxref=NCBI_GP:TGD83674.1;Name=TGD83674.1;end_range=1679,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=C9F07_13725;partial=true;product=ornithine decarboxylase;protein_id=TGD83674.1;transl_table=11 ##sequence-region PYKI01000477.1 1 1678 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000477.1 Genbank region 1 1678 . + . ID=PYKI01000477.1:1..1678;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000477.1 Genbank pseudogene 81 830 . + . ID=gene-C9F07_03815;Name=C9F07_03815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03815;pseudo=true PYKI01000477.1 Protein Homology CDS 81 830 . + 0 ID=cds-C9F07_03815;Parent=gene-C9F07_03815;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=C9F07_03815;product=3-deoxy-7-phosphoheptulonate synthase;pseudo=true;transl_table=11 PYKI01000477.1 Genbank gene 987 1178 . + . ID=gene-C9F07_03820;Name=C9F07_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_03820 PYKI01000477.1 Protein Homology CDS 987 1178 . + 0 ID=cds-TGE19226.1;Parent=gene-C9F07_03820;Dbxref=NCBI_GP:TGE19226.1;Name=TGE19226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456165.1;locus_tag=C9F07_03820;product=hemin uptake protein HemP;protein_id=TGE19226.1;transl_table=11 PYKI01000477.1 Genbank pseudogene 1213 1678 . - . ID=gene-C9F07_03825;Name=C9F07_03825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_03825;pseudo=true PYKI01000477.1 Protein Homology CDS 1213 1678 . - 1 ID=cds-C9F07_03825;Parent=gene-C9F07_03825;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456166.1;locus_tag=C9F07_03825;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002825.1 1 1678 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002825.1 Genbank region 1 1678 . + . ID=PYKI01002825.1:1..1678;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002825.1 Genbank gene 1 252 . + . ID=gene-C9F07_28250;Name=C9F07_28250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28250;partial=true;start_range=.,1 PYKI01002825.1 Protein Homology CDS 1 252 . + 0 ID=cds-TGD45622.1;Parent=gene-C9F07_28250;Dbxref=NCBI_GP:TGD45622.1;Name=TGD45622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462710.1;locus_tag=C9F07_28250;partial=true;product=YceK/YidQ family lipoprotein;protein_id=TGD45622.1;start_range=.,1;transl_table=11 PYKI01002825.1 Genbank gene 254 1480 . - . ID=gene-C9F07_28255;Name=C9F07_28255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_28255 PYKI01002825.1 Protein Homology CDS 254 1480 . - 0 ID=cds-TGD45623.1;Parent=gene-C9F07_28255;Dbxref=NCBI_GP:TGD45623.1;Name=TGD45623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=C9F07_28255;product=DUF3748 domain-containing protein;protein_id=TGD45623.1;transl_table=11 ##sequence-region PYKI01002414.1 1 1676 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002414.1 Genbank region 1 1676 . + . ID=PYKI01002414.1:1..1676;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002414.1 Genbank gene 1 146 . + . ID=gene-C9F07_23865;Name=C9F07_23865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23865;partial=true;start_range=.,1 PYKI01002414.1 Protein Homology CDS 1 146 . + 2 ID=cds-TGD51640.1;Parent=gene-C9F07_23865;Dbxref=NCBI_GP:TGD51640.1;Name=TGD51640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312340.1;locus_tag=C9F07_23865;partial=true;product=signal recognition particle-docking protein FtsY;protein_id=TGD51640.1;start_range=.,1;transl_table=11 PYKI01002414.1 Genbank gene 149 817 . + . ID=gene-C9F07_23870;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=C9F07_23870 PYKI01002414.1 Protein Homology CDS 149 817 . + 0 ID=cds-TGD51641.1;Parent=gene-C9F07_23870;Dbxref=NCBI_GP:TGD51641.1;Name=TGD51641.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458351.1;locus_tag=C9F07_23870;product=cell division ATP-binding protein FtsE;protein_id=TGD51641.1;transl_table=11 PYKI01002414.1 Genbank gene 810 1676 . + . ID=gene-C9F07_23875;Name=C9F07_23875;end_range=1676,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23875;partial=true PYKI01002414.1 Protein Homology CDS 810 1676 . + 0 ID=cds-TGD51642.1;Parent=gene-C9F07_23875;Dbxref=NCBI_GP:TGD51642.1;Name=TGD51642.1;end_range=1676,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458352.1;locus_tag=C9F07_23875;partial=true;product=cell division protein FtsX;protein_id=TGD51642.1;transl_table=11 ##sequence-region PYKI01000761.1 1 4497 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000761.1 Genbank region 1 4497 . + . ID=PYKI01000761.1:1..4497;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000761.1 Genbank pseudogene 185 1609 . - . ID=gene-C9F07_06705;Name=C9F07_06705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06705;pseudo=true PYKI01000761.1 Protein Homology CDS 185 1609 . - 0 ID=cds-C9F07_06705;Parent=gene-C9F07_06705;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457562.1;locus_tag=C9F07_06705;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000761.1 Genbank pseudogene 1625 3046 . - . ID=gene-C9F07_06710;Name=C9F07_06710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06710;pseudo=true PYKI01000761.1 Protein Homology CDS 1625 3046 . - 0 ID=cds-C9F07_06710;Parent=gene-C9F07_06710;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230301.1;locus_tag=C9F07_06710;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000761.1 Genbank pseudogene 3389 4095 . - . ID=gene-C9F07_06715;Name=C9F07_06715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_06715;pseudo=true PYKI01000761.1 Protein Homology CDS 3389 4095 . - 0 ID=cds-C9F07_06715;Parent=gene-C9F07_06715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222780.1;locus_tag=C9F07_06715;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01000761.1 Genbank gene 4116 4497 . - . ID=gene-C9F07_06720;Name=C9F07_06720;end_range=4497,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_06720;partial=true PYKI01000761.1 Protein Homology CDS 4116 4497 . - 1 ID=cds-TGE09246.1;Parent=gene-C9F07_06720;Dbxref=NCBI_GP:TGE09246.1;Name=TGE09246.1;Note=septal ring component that protects the divisome from stress;end_range=4497,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457565.1;locus_tag=C9F07_06720;partial=true;product=cell division protein FtsP;protein_id=TGE09246.1;transl_table=11 ##sequence-region PYKI01002079.1 1 1675 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002079.1 Genbank region 1 1675 . + . ID=PYKI01002079.1:1..1675;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002079.1 Genbank pseudogene 1 1648 . + . ID=gene-C9F07_20160;Name=C9F07_20160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20160;pseudo=true PYKI01002079.1 Protein Homology CDS 1 1648 . + 1 ID=cds-C9F07_20160;Parent=gene-C9F07_20160;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455902.1;locus_tag=C9F07_20160;product=virulence factor SrfB;pseudo=true;transl_table=11 ##sequence-region PYKI01001452.1 1 1672 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001452.1 Genbank region 1 1672 . + . ID=PYKI01001452.1:1..1672;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001452.1 Genbank gene 1 356 . + . ID=gene-C9F07_13760;Name=C9F07_13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13760;partial=true;start_range=.,1 PYKI01001452.1 Protein Homology CDS 1 356 . + 2 ID=cds-TGD83419.1;Parent=gene-C9F07_13760;Dbxref=NCBI_GP:TGD83419.1;Name=TGD83419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456535.1;locus_tag=C9F07_13760;partial=true;product=flagellar hook-length control protein FliK;protein_id=TGD83419.1;start_range=.,1;transl_table=11 PYKI01001452.1 Genbank gene 461 928 . + . ID=gene-C9F07_13765;Name=C9F07_13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13765 PYKI01001452.1 Protein Homology CDS 461 928 . + 0 ID=cds-TGD83420.1;Parent=gene-C9F07_13765;Dbxref=NCBI_GP:TGD83420.1;Name=TGD83420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=C9F07_13765;product=flagellar basal body-associated protein FliL;protein_id=TGD83420.1;transl_table=11 PYKI01001452.1 Genbank gene 933 1672 . + . ID=gene-C9F07_13770;Name=C9F07_13770;end_range=1672,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_13770;partial=true PYKI01001452.1 Protein Homology CDS 933 1672 . + 0 ID=cds-TGD83421.1;Parent=gene-C9F07_13770;Dbxref=NCBI_GP:TGD83421.1;Name=TGD83421.1;end_range=1672,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=C9F07_13770;partial=true;product=flagellar motor switch protein FliM;protein_id=TGD83421.1;transl_table=11 ##sequence-region PYKI01002308.1 1 1671 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002308.1 Genbank region 1 1671 . + . ID=PYKI01002308.1:1..1671;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002308.1 Genbank gene 252 1671 . + . ID=gene-C9F07_22625;Name=C9F07_22625;end_range=1671,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_22625;partial=true PYKI01002308.1 Protein Homology CDS 252 1671 . + 0 ID=cds-TGD54375.1;Parent=gene-C9F07_22625;Dbxref=NCBI_GP:TGD54375.1;Name=TGD54375.1;end_range=1671,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=C9F07_22625;partial=true;product=two-component system sensor histidine kinase DcuS;protein_id=TGD54375.1;transl_table=11 ##sequence-region PYKI01001315.1 1 1671 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001315.1 Genbank region 1 1671 . + . ID=PYKI01001315.1:1..1671;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001315.1 Genbank gene 1 244 . - . ID=gene-C9F07_12300;Name=C9F07_12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12300;partial=true;start_range=.,1 PYKI01001315.1 Protein Homology CDS 1 244 . - 0 ID=cds-TGD86420.1;Parent=gene-C9F07_12300;Dbxref=NCBI_GP:TGD86420.1;Name=TGD86420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459886.1;locus_tag=C9F07_12300;partial=true;product=DNA breaking-rejoining protein;protein_id=TGD86420.1;start_range=.,1;transl_table=11 PYKI01001315.1 Genbank gene 299 481 . + . ID=gene-C9F07_12305;Name=C9F07_12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12305 PYKI01001315.1 Protein Homology CDS 299 481 . + 0 ID=cds-TGD86423.1;Parent=gene-C9F07_12305;Dbxref=NCBI_GP:TGD86423.1;Name=TGD86423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537366.1;locus_tag=C9F07_12305;product=hypothetical protein;protein_id=TGD86423.1;transl_table=11 PYKI01001315.1 Genbank gene 546 713 . + . ID=gene-C9F07_12310;Name=C9F07_12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12310 PYKI01001315.1 Protein Homology CDS 546 713 . + 0 ID=cds-TGD86421.1;Parent=gene-C9F07_12310;Dbxref=NCBI_GP:TGD86421.1;Name=TGD86421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460824.1;locus_tag=C9F07_12310;product=lytic enzyme;protein_id=TGD86421.1;transl_table=11 PYKI01001315.1 Genbank gene 970 1503 . - . ID=gene-C9F07_12315;Name=C9F07_12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_12315 PYKI01001315.1 Protein Homology CDS 970 1503 . - 0 ID=cds-TGD86422.1;Parent=gene-C9F07_12315;Dbxref=NCBI_GP:TGD86422.1;Name=TGD86422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460825.1;locus_tag=C9F07_12315;product=DUF2514 domain-containing protein;protein_id=TGD86422.1;transl_table=11 ##sequence-region PYKI01002355.1 1 1671 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002355.1 Genbank region 1 1671 . + . ID=PYKI01002355.1:1..1671;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002355.1 Genbank pseudogene 26 175 . + . ID=gene-C9F07_23135;Name=C9F07_23135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_23135;pseudo=true PYKI01002355.1 Protein Homology CDS 26 175 . + 0 ID=cds-C9F07_23135;Parent=gene-C9F07_23135;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458981.1;locus_tag=C9F07_23135;product=phosphopentomutase;pseudo=true;transl_table=11 PYKI01002355.1 Genbank gene 397 1116 . + . ID=gene-C9F07_23140;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=C9F07_23140 PYKI01002355.1 Protein Homology CDS 397 1116 . + 0 ID=cds-TGD53178.1;Parent=gene-C9F07_23140;Dbxref=NCBI_GP:TGD53178.1;Name=TGD53178.1;gbkey=CDS;gene=deoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458982.1;locus_tag=C9F07_23140;product=purine-nucleoside phosphorylase;protein_id=TGD53178.1;transl_table=11 PYKI01002355.1 Genbank gene 1323 1671 . + . ID=gene-C9F07_23145;Name=C9F07_23145;end_range=1671,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_23145;partial=true PYKI01002355.1 Protein Homology CDS 1323 1671 . + 0 ID=cds-TGD53179.1;Parent=gene-C9F07_23145;Dbxref=NCBI_GP:TGD53179.1;Name=TGD53179.1;end_range=1671,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458983.1;locus_tag=C9F07_23145;partial=true;product=transposase;protein_id=TGD53179.1;transl_table=11 ##sequence-region PYKI01002133.1 1 1670 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002133.1 Genbank region 1 1670 . + . ID=PYKI01002133.1:1..1670;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002133.1 Genbank gene 1 534 . + . ID=gene-C9F07_20640;Name=C9F07_20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20640;partial=true;start_range=.,1 PYKI01002133.1 Protein Homology CDS 1 534 . + 0 ID=cds-TGD57839.1;Parent=gene-C9F07_20640;Dbxref=NCBI_GP:TGD57839.1;Name=TGD57839.1;Note=catalyzes the formation of a meso-diaminopimelyl- meso-diaminopimelyl crosslink;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=C9F07_20640;partial=true;product=L%2CD-transpeptidase;protein_id=TGD57839.1;start_range=.,1;transl_table=11 PYKI01002133.1 Genbank pseudogene 471 685 . - . ID=gene-C9F07_20645;Name=C9F07_20645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20645;pseudo=true PYKI01002133.1 Protein Homology CDS 471 685 . - 0 ID=cds-C9F07_20645;Parent=gene-C9F07_20645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004141776.1;locus_tag=C9F07_20645;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002133.1 Genbank gene 794 1342 . + . ID=gene-C9F07_20650;Name=C9F07_20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20650 PYKI01002133.1 Protein Homology CDS 794 1342 . + 0 ID=cds-TGD57840.1;Parent=gene-C9F07_20650;Dbxref=NCBI_GP:TGD57840.1;Name=TGD57840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=C9F07_20650;product=DUF882 domain-containing protein;protein_id=TGD57840.1;transl_table=11 PYKI01002133.1 Genbank gene 1370 1670 . + . ID=gene-C9F07_20655;Name=C9F07_20655;end_range=1670,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20655;partial=true PYKI01002133.1 Protein Homology CDS 1370 1670 . + 0 ID=cds-TGD57841.1;Parent=gene-C9F07_20655;Dbxref=NCBI_GP:TGD57841.1;Name=TGD57841.1;end_range=1670,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=C9F07_20655;partial=true;product=hypothetical protein;protein_id=TGD57841.1;transl_table=11 ##sequence-region PYKI01000202.1 1 1670 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01000202.1 Genbank region 1 1670 . + . ID=PYKI01000202.1:1..1670;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01000202.1 Genbank pseudogene 63 1340 . - . ID=gene-C9F07_01350;Name=astD;gbkey=Gene;gene=astD;gene_biotype=pseudogene;locus_tag=C9F07_01350;pseudo=true PYKI01000202.1 Protein Homology CDS 63 1340 . - 0 ID=cds-C9F07_01350;Parent=gene-C9F07_01350;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=astD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=C9F07_01350;product=succinylglutamate-semialdehyde dehydrogenase;pseudo=true;transl_table=11 PYKI01000202.1 Genbank gene 1337 1670 . - . ID=gene-C9F07_01355;Name=C9F07_01355;end_range=1670,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_01355;partial=true PYKI01000202.1 Protein Homology CDS 1337 1670 . - 1 ID=cds-TGE30024.1;Parent=gene-C9F07_01355;Dbxref=NCBI_GP:TGE30024.1;Name=TGE30024.1;end_range=1670,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=C9F07_01355;partial=true;product=arginine N-succinyltransferase;protein_id=TGE30024.1;transl_table=11 ##sequence-region PYKI01003159.1 1 1669 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003159.1 Genbank region 1 1669 . + . ID=PYKI01003159.1:1..1669;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003159.1 Genbank gene 1 1065 . - . ID=gene-C9F07_31680;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=C9F07_31680;partial=true;start_range=.,1 PYKI01003159.1 Protein Homology CDS 1 1065 . - 0 ID=cds-TGD38160.1;Parent=gene-C9F07_31680;Dbxref=NCBI_GP:TGD38160.1;Name=TGD38160.1;gbkey=CDS;gene=gshA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=C9F07_31680;partial=true;product=glutamate--cysteine ligase;protein_id=TGD38160.1;start_range=.,1;transl_table=11 PYKI01003159.1 Genbank gene 1142 1567 . - . ID=gene-C9F07_31685;Name=C9F07_31685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_31685 PYKI01003159.1 Protein Homology CDS 1142 1567 . - 0 ID=cds-TGD38161.1;Parent=gene-C9F07_31685;Dbxref=NCBI_GP:TGD38161.1;Name=TGD38161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457217.1;locus_tag=C9F07_31685;product=DedA family protein;protein_id=TGD38161.1;transl_table=11 ##sequence-region PYKI01001879.1 1 1669 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001879.1 Genbank region 1 1669 . + . ID=PYKI01001879.1:1..1669;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001879.1 Genbank gene 48 740 . + . ID=gene-C9F07_18125;Name=C9F07_18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18125 PYKI01001879.1 Protein Homology CDS 48 740 . + 0 ID=cds-TGD62241.1;Parent=gene-C9F07_18125;Dbxref=NCBI_GP:TGD62241.1;Name=TGD62241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456076.1;locus_tag=C9F07_18125;product=electron transporter RsxE;protein_id=TGD62241.1;transl_table=11 PYKI01001879.1 Genbank gene 740 1375 . + . ID=gene-C9F07_18130;Name=C9F07_18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18130 PYKI01001879.1 Protein Homology CDS 740 1375 . + 0 ID=cds-TGD62242.1;Parent=gene-C9F07_18130;Dbxref=NCBI_GP:TGD62242.1;Name=TGD62242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=C9F07_18130;product=endonuclease III;protein_id=TGD62242.1;transl_table=11 ##sequence-region PYKI01001904.1 1 1667 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001904.1 Genbank region 1 1667 . + . ID=PYKI01001904.1:1..1667;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001904.1 Genbank gene 1 306 . + . ID=gene-C9F07_18340;Name=C9F07_18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18340;partial=true;start_range=.,1 PYKI01001904.1 Protein Homology CDS 1 306 . + 0 ID=cds-TGD61408.1;Parent=gene-C9F07_18340;Dbxref=NCBI_GP:TGD61408.1;Name=TGD61408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457603.1;locus_tag=C9F07_18340;partial=true;product=G/U mismatch-specific DNA glycosylase;protein_id=TGD61408.1;start_range=.,1;transl_table=11 PYKI01001904.1 Genbank gene 430 1667 . - . ID=gene-C9F07_18345;Name=C9F07_18345;end_range=1667,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_18345;partial=true PYKI01001904.1 Protein Homology CDS 430 1667 . - 2 ID=cds-TGD61409.1;Parent=gene-C9F07_18345;Dbxref=NCBI_GP:TGD61409.1;Name=TGD61409.1;end_range=1667,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457602.1;locus_tag=C9F07_18345;partial=true;product=RNA polymerase sigma factor RpoD;protein_id=TGD61409.1;transl_table=11 ##sequence-region PYKI01002097.1 1 4495 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002097.1 Genbank region 1 4495 . + . ID=PYKI01002097.1:1..4495;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002097.1 Genbank gene 1 507 . + . ID=gene-C9F07_20335;Name=C9F07_20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20335;partial=true;start_range=.,1 PYKI01002097.1 Protein Homology CDS 1 507 . + 0 ID=cds-TGD58793.1;Parent=gene-C9F07_20335;Dbxref=NCBI_GP:TGD58793.1;Name=TGD58793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457931.1;locus_tag=C9F07_20335;partial=true;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=TGD58793.1;start_range=.,1;transl_table=11 PYKI01002097.1 Genbank gene 554 913 . - . ID=gene-C9F07_20340;Name=C9F07_20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20340 PYKI01002097.1 Protein Homology CDS 554 913 . - 0 ID=cds-TGD58794.1;Parent=gene-C9F07_20340;Dbxref=NCBI_GP:TGD58794.1;Name=TGD58794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457932.1;locus_tag=C9F07_20340;product=hypothetical protein;protein_id=TGD58794.1;transl_table=11 PYKI01002097.1 Genbank gene 929 1564 . - . ID=gene-C9F07_20345;Name=C9F07_20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20345 PYKI01002097.1 Protein Homology CDS 929 1564 . - 0 ID=cds-TGD58795.1;Parent=gene-C9F07_20345;Dbxref=NCBI_GP:TGD58795.1;Name=TGD58795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457933.1;locus_tag=C9F07_20345;product=HTH-type transcriptional repressor FabR;protein_id=TGD58795.1;transl_table=11 PYKI01002097.1 Genbank gene 1566 1754 . + . ID=gene-C9F07_20350;Name=C9F07_20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20350 PYKI01002097.1 Protein Homology CDS 1566 1754 . + 0 ID=cds-TGD58796.1;Parent=gene-C9F07_20350;Dbxref=NCBI_GP:TGD58796.1;Name=TGD58796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654329.1;locus_tag=C9F07_20350;product=hypothetical protein;protein_id=TGD58796.1;transl_table=11 PYKI01002097.1 Genbank gene 1763 3163 . + . ID=gene-C9F07_20355;Name=C9F07_20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20355 PYKI01002097.1 Protein Homology CDS 1763 3163 . + 0 ID=cds-TGD58797.1;Parent=gene-C9F07_20355;Dbxref=NCBI_GP:TGD58797.1;Name=TGD58797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457934.1;locus_tag=C9F07_20355;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=TGD58797.1;transl_table=11 PYKI01002097.1 Genbank gene 3146 4063 . - . ID=gene-C9F07_20360;Name=C9F07_20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_20360 PYKI01002097.1 Protein Homology CDS 3146 4063 . - 0 ID=cds-TGD58798.1;Parent=gene-C9F07_20360;Dbxref=NCBI_GP:TGD58798.1;Name=TGD58798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=C9F07_20360;product=DNA-binding transcriptional regulator OxyR;protein_id=TGD58798.1;transl_table=11 PYKI01002097.1 Genbank pseudogene 4143 4235 . - . ID=gene-C9F07_20365;Name=C9F07_20365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20365;pseudo=true PYKI01002097.1 Protein Homology CDS 4143 4235 . - 0 ID=cds-C9F07_20365;Parent=gene-C9F07_20365;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001612276.1;locus_tag=C9F07_20365;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002208.1 1 1667 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002208.1 Genbank region 1 1667 . + . ID=PYKI01002208.1:1..1667;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002208.1 Genbank gene 1 563 . - . ID=gene-C9F07_21485;Name=C9F07_21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_21485;partial=true;start_range=.,1 PYKI01002208.1 Protein Homology CDS 1 563 . - 0 ID=cds-TGD56507.1;Parent=gene-C9F07_21485;Dbxref=NCBI_GP:TGD56507.1;Name=TGD56507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=C9F07_21485;partial=true;product=mechanosensitive channel protein;protein_id=TGD56507.1;start_range=.,1;transl_table=11 PYKI01002208.1 Genbank gene 682 1404 . - . ID=gene-C9F07_21490;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=C9F07_21490 PYKI01002208.1 Protein Homology CDS 682 1404 . - 0 ID=cds-TGD56508.1;Parent=gene-C9F07_21490;Dbxref=NCBI_GP:TGD56508.1;Name=TGD56508.1;Note=similar to ATP-binding component of ABC transporters;gbkey=CDS;gene=glnQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=C9F07_21490;product=glutamine ABC transporter ATP-binding protein;protein_id=TGD56508.1;transl_table=11 PYKI01002208.1 Genbank gene 1401 1667 . - . ID=gene-C9F07_21495;Name=glnP;end_range=1667,.;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=C9F07_21495;partial=true PYKI01002208.1 Protein Homology CDS 1401 1667 . - 0 ID=cds-TGD56509.1;Parent=gene-C9F07_21495;Dbxref=NCBI_GP:TGD56509.1;Name=TGD56509.1;Note=similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine;end_range=1667,.;gbkey=CDS;gene=glnP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=C9F07_21495;partial=true;product=glutamine ABC transporter permease GlnP;protein_id=TGD56509.1;transl_table=11 ##sequence-region PYKI01001564.1 1 1666 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001564.1 Genbank region 1 1666 . + . ID=PYKI01001564.1:1..1666;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001564.1 Genbank gene 85 276 . + . ID=gene-C9F07_14970;Name=C9F07_14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14970 PYKI01001564.1 Protein Homology CDS 85 276 . + 0 ID=cds-TGD73767.1;Parent=gene-C9F07_14970;Dbxref=NCBI_GP:TGD73767.1;Name=TGD73767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456556.1;locus_tag=C9F07_14970;product=hypothetical protein;protein_id=TGD73767.1;transl_table=11 PYKI01001564.1 Genbank gene 731 943 . + . ID=gene-C9F07_14975;Name=C9F07_14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14975 PYKI01001564.1 Protein Homology CDS 731 943 . + 0 ID=cds-TGD73768.1;Parent=gene-C9F07_14975;Dbxref=NCBI_GP:TGD73768.1;Name=TGD73768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=C9F07_14975;product=cold-shock protein;protein_id=TGD73768.1;transl_table=11 PYKI01001564.1 Genbank gene 954 1142 . + . ID=gene-C9F07_14980;Name=C9F07_14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14980 PYKI01001564.1 Protein Homology CDS 954 1142 . + 0 ID=cds-TGD73770.1;Parent=gene-C9F07_14980;Dbxref=NCBI_GP:TGD73770.1;Name=TGD73770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101558.1;locus_tag=C9F07_14980;product=cold-shock protein;protein_id=TGD73770.1;transl_table=11 PYKI01001564.1 Genbank gene 1401 1666 . - . ID=gene-C9F07_14985;Name=C9F07_14985;end_range=1666,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14985;partial=true PYKI01001564.1 Protein Homology CDS 1401 1666 . - 2 ID=cds-TGD73769.1;Parent=gene-C9F07_14985;Dbxref=NCBI_GP:TGD73769.1;Name=TGD73769.1;Note=allows for ions and hydrophilic solutes to cross the outer membrane;end_range=1666,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456554.1;locus_tag=C9F07_14985;partial=true;product=porin;protein_id=TGD73769.1;transl_table=11 ##sequence-region PYKI01001547.1 1 1666 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001547.1 Genbank region 1 1666 . + . ID=PYKI01001547.1:1..1666;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001547.1 Genbank gene 1 1225 . + . ID=gene-C9F07_14820;Name=C9F07_14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_14820;partial=true;start_range=.,1 PYKI01001547.1 Protein Homology CDS 1 1225 . + 1 ID=cds-TGD74985.1;Parent=gene-C9F07_14820;Dbxref=NCBI_GP:TGD74985.1;Name=TGD74985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456613.1;locus_tag=C9F07_14820;partial=true;product=thiosulfate reductase PhsA;protein_id=TGD74985.1;start_range=.,1;transl_table=11 PYKI01001547.1 Genbank gene 1240 1666 . + . ID=gene-C9F07_14825;Name=phsB;end_range=1666,.;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=C9F07_14825;partial=true PYKI01001547.1 Protein Homology CDS 1240 1666 . + 0 ID=cds-TGD74986.1;Parent=gene-C9F07_14825;Dbxref=NCBI_GP:TGD74986.1;Name=TGD74986.1;end_range=1666,.;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456612.1;locus_tag=C9F07_14825;partial=true;product=thiosulfate reductase electron transport protein PhsB;protein_id=TGD74986.1;transl_table=11 ##sequence-region PYKI01003444.1 1 1663 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003444.1 Genbank region 1 1663 . + . ID=PYKI01003444.1:1..1663;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003444.1 Genbank pseudogene 7 450 . + . ID=gene-C9F07_34625;Name=C9F07_34625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34625;pseudo=true PYKI01003444.1 Protein Homology CDS 7 450 . + 0 ID=cds-C9F07_34625;Parent=gene-C9F07_34625;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455843.1;locus_tag=C9F07_34625;product=universal stress protein UspE;pseudo=true;transl_table=11 PYKI01003444.1 Genbank pseudogene 508 759 . - . ID=gene-C9F07_34630;Name=C9F07_34630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_34630;pseudo=true PYKI01003444.1 Protein Homology CDS 508 759 . - 0 ID=cds-C9F07_34630;Parent=gene-C9F07_34630;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455842.1;locus_tag=C9F07_34630;product=DUF2534 domain-containing protein;pseudo=true;transl_table=11 PYKI01003444.1 Genbank gene 998 1663 . + . ID=gene-C9F07_34635;Name=C9F07_34635;end_range=1663,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_34635;partial=true PYKI01003444.1 Protein Homology CDS 998 1663 . + 0 ID=cds-TGD33422.1;Parent=gene-C9F07_34635;Dbxref=NCBI_GP:TGD33422.1;Name=TGD33422.1;end_range=1663,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455841.1;locus_tag=C9F07_34635;partial=true;product=mechanosensitive ion channel protein MscS;protein_id=TGD33422.1;transl_table=11 ##sequence-region PYKI01003568.1 1 1662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01003568.1 Genbank region 1 1662 . + . ID=PYKI01003568.1:1..1662;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01003568.1 Genbank gene 1 636 . - . ID=gene-C9F07_36030;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=C9F07_36030;partial=true;start_range=.,1 PYKI01003568.1 Protein Homology CDS 1 636 . - 0 ID=cds-TGD30320.1;Parent=gene-C9F07_36030;Dbxref=NCBI_GP:TGD30320.1;Name=TGD30320.1;Note=bifunctional 2%2C3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase%3B activates the carboxylate group of 2%2C3-dihydroxy-benzoate forming (2%2C3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2%2C3-dihydroxy-benzoate adenylate;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455172.1;locus_tag=C9F07_36030;partial=true;product=2%2C3-dihydroxybenzoate-AMP ligase;protein_id=TGD30320.1;start_range=.,1;transl_table=11 PYKI01003568.1 Genbank gene 643 1662 . - . ID=gene-C9F07_36035;Name=C9F07_36035;end_range=1662,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_36035;partial=true PYKI01003568.1 Protein Homology CDS 643 1662 . - 0 ID=cds-TGD30319.1;Parent=gene-C9F07_36035;Dbxref=NCBI_GP:TGD30319.1;Name=TGD30319.1;end_range=1662,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455171.3;locus_tag=C9F07_36035;partial=true;product=isochorismate synthase EntC;protein_id=TGD30319.1;transl_table=11 ##sequence-region PYKI01002090.1 1 1662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002090.1 Genbank region 1 1662 . + . ID=PYKI01002090.1:1..1662;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002090.1 Genbank pseudogene 1 828 . - . ID=gene-C9F07_20285;Name=C9F07_20285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20285;pseudo=true PYKI01002090.1 Protein Homology CDS 1 828 . - 0 ID=cds-C9F07_20285;Parent=gene-C9F07_20285;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=C9F07_20285;product=NAD-dependent phenylacetaldehyde dehydrogenase;pseudo=true;transl_table=11 PYKI01002090.1 Genbank pseudogene 990 1662 . + . ID=gene-C9F07_20290;Name=C9F07_20290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_20290;pseudo=true PYKI01002090.1 Protein Homology CDS 990 1662 . + 0 ID=cds-C9F07_20290;Parent=gene-C9F07_20290;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457524.1;locus_tag=C9F07_20290;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 ##sequence-region PYKI01001810.1 1 1659 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001810.1 Genbank region 1 1659 . + . ID=PYKI01001810.1:1..1659;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001810.1 Genbank gene 1 1644 . - . ID=gene-C9F07_17420;Name=C9F07_17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_17420;partial=true;start_range=.,1 PYKI01001810.1 Protein Homology CDS 1 1644 . - 0 ID=cds-TGD65392.1;Parent=gene-C9F07_17420;Dbxref=NCBI_GP:TGD65392.1;Name=TGD65392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=C9F07_17420;partial=true;product=Fis family transcriptional regulator;protein_id=TGD65392.1;start_range=.,1;transl_table=11 ##sequence-region PYKI01002614.1 1 1659 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002614.1 Genbank region 1 1659 . + . ID=PYKI01002614.1:1..1659;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002614.1 Genbank gene 1 428 . + . ID=gene-C9F07_25995;Name=C9F07_25995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_25995;partial=true;start_range=.,1 PYKI01002614.1 Protein Homology CDS 1 428 . + 2 ID=cds-TGD49545.1;Parent=gene-C9F07_25995;Dbxref=NCBI_GP:TGD49545.1;Name=TGD49545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=C9F07_25995;partial=true;product=hypothetical protein;protein_id=TGD49545.1;start_range=.,1;transl_table=11 PYKI01002614.1 Genbank gene 602 1659 . - . ID=gene-C9F07_26000;Name=C9F07_26000;end_range=1659,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_26000;partial=true PYKI01002614.1 Protein Homology CDS 602 1659 . - 2 ID=cds-TGD49546.1;Parent=gene-C9F07_26000;Dbxref=NCBI_GP:TGD49546.1;Name=TGD49546.1;Note=catalyzes the oxidation of acetaldehyde%2C benzaldehyde%2C propionaldehyde and other aldehydes;end_range=1659,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458246.1;locus_tag=C9F07_26000;partial=true;product=aldehyde dehydrogenase;protein_id=TGD49546.1;transl_table=11 ##sequence-region PYKI01001574.1 1 1652 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01001574.1 Genbank region 1 1652 . + . ID=PYKI01001574.1:1..1652;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01001574.1 Genbank gene 1 173 . + . ID=gene-C9F07_15070;Name=C9F07_15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15070;partial=true;start_range=.,1 PYKI01001574.1 Protein Homology CDS 1 173 . + 2 ID=cds-TGD73228.1;Parent=gene-C9F07_15070;Dbxref=NCBI_GP:TGD73228.1;Name=TGD73228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=C9F07_15070;partial=true;product=hypothetical protein;protein_id=TGD73228.1;start_range=.,1;transl_table=11 PYKI01001574.1 Genbank gene 352 855 . - . ID=gene-C9F07_15075;Name=C9F07_15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_15075 PYKI01001574.1 Protein Homology CDS 352 855 . - 0 ID=cds-TGD73229.1;Parent=gene-C9F07_15075;Dbxref=NCBI_GP:TGD73229.1;Name=TGD73229.1;Note=ferritin B%3B required for virulence in Salmonella%3B may be involved in repair of damaged Fe-S clusters;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456497.1;locus_tag=C9F07_15075;product=ferritin;protein_id=TGD73229.1;transl_table=11 PYKI01001574.1 Genbank pseudogene 1413 1592 . + . ID=gene-C9F07_15080;Name=C9F07_15080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_15080;pseudo=true PYKI01001574.1 Protein Homology CDS 1413 1592 . + 0 ID=cds-C9F07_15080;Parent=gene-C9F07_15080;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456496.1;locus_tag=C9F07_15080;product=DJ-1 family protein;pseudo=true;transl_table=11 ##sequence-region PYKI01002956.1 1 4463 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=436295 PYKI01002956.1 Genbank region 1 4463 . + . ID=PYKI01002956.1:1..4463;Dbxref=taxon:436295;collected-by=Chelea Matchawe;collection-date=2014-11-01;country=Cameroon: Yaounde;gbkey=Src;isolation-source=Abattoir;lat-lon=3.52 N 11.31 E;mol_type=genomic DNA;nat-host=Bovine;serovar=Poona;strain=22sa PYKI01002956.1 Genbank gene 1 291 . - . ID=gene-C9F07_29600;Name=C9F07_29600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29600;partial=true;start_range=.,1 PYKI01002956.1 Protein Homology CDS 1 291 . - 0 ID=cds-TGD41993.1;Parent=gene-C9F07_29600;Dbxref=NCBI_GP:TGD41993.1;Name=TGD41993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454940.1;locus_tag=C9F07_29600;partial=true;product=type 1 fimbrial protein;protein_id=TGD41993.1;start_range=.,1;transl_table=11 PYKI01002956.1 Genbank gene 394 609 . - . ID=gene-C9F07_29605;Name=C9F07_29605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29605 PYKI01002956.1 Protein Homology CDS 394 609 . - 0 ID=cds-TGD41994.1;Parent=gene-C9F07_29605;Dbxref=NCBI_GP:TGD41994.1;Name=TGD41994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535457.1;locus_tag=C9F07_29605;product=hypothetical protein;protein_id=TGD41994.1;transl_table=11 PYKI01002956.1 Genbank gene 925 1689 . + . ID=gene-C9F07_29610;Name=C9F07_29610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29610 PYKI01002956.1 Protein Homology CDS 925 1689 . + 0 ID=cds-TGD41995.1;Parent=gene-C9F07_29610;Dbxref=NCBI_GP:TGD41995.1;Name=TGD41995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459336.1;locus_tag=C9F07_29610;product=hypothetical protein;protein_id=TGD41995.1;transl_table=11 PYKI01002956.1 Genbank pseudogene 1662 1962 . + . ID=gene-C9F07_29615;Name=C9F07_29615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C9F07_29615;pseudo=true PYKI01002956.1 Protein Homology CDS 1662 1962 . + 0 ID=cds-C9F07_29615;Parent=gene-C9F07_29615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=C9F07_29615;product=hypothetical protein;pseudo=true;transl_table=11 PYKI01002956.1 Genbank gene 1959 2162 . + . ID=gene-C9F07_29620;Name=C9F07_29620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29620 PYKI01002956.1 GeneMarkS+ CDS 1959 2162 . + 0 ID=cds-TGD41996.1;Parent=gene-C9F07_29620;Dbxref=NCBI_GP:TGD41996.1;Name=TGD41996.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C9F07_29620;product=hypothetical protein;protein_id=TGD41996.1;transl_table=11 PYKI01002956.1 Genbank gene 2464 4038 . + . ID=gene-C9F07_29625;Name=C9F07_29625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29625 PYKI01002956.1 Protein Homology CDS 2464 4038 . + 0 ID=cds-TGD41997.1;Parent=gene-C9F07_29625;Dbxref=NCBI_GP:TGD41997.1;Name=TGD41997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=C9F07_29625;product=cyclic diguanylate phosphodiesterase;protein_id=TGD41997.1;transl_table=11 PYKI01002956.1 Genbank gene 4138 4463 . + . ID=gene-C9F07_29630;Name=C9F07_29630;end_range=4463,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C9F07_29630;partial=true PYKI01002956.1 Protein Homology CDS 4138 4463 . + 0 ID=cds-TGD41998.1;Parent=gene-C9F07_29630;Dbxref=NCBI_GP:TGD41998.1;Name=TGD41998.1;end_range=4463,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=C9F07_29630;partial=true;product=response regulator;protein_id=TGD41998.1;transl_table=11 ###